-- dump date 20140205_000730 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003254644.1 261866722 8537838 complement(join(2105476..2105764,1..335)) 1 NC_013416.1 identified by Glimmer3; putative; putative sulfate transport protein CysZ 335 8537838 D11S_0001 Aggregatibacter actinomycetemcomitans D11S-1 putative sulfate transport protein CysZ YP_003254644.1 2105476 R 668336 CDS YP_003254645.1 261866723 8535721 complement(351..581) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 581 8535721 D11S_0002 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254645.1 351 R 668336 CDS YP_003254646.1 261866724 8535722 complement(578..1498) 1 NC_013416.1 identified by Glimmer3; putative; Mu phage DNA transposition protein B 1498 8535722 D11S_0003 Aggregatibacter actinomycetemcomitans D11S-1 Mu phage DNA transposition protein B YP_003254646.1 578 R 668336 CDS YP_003254647.1 261866725 8535723 complement(1534..3552) 1 NC_013416.1 identified by Glimmer3; putative; transposase 3552 8535723 D11S_0004 Aggregatibacter actinomycetemcomitans D11S-1 transposase YP_003254647.1 1534 R 668336 CDS YP_003254648.1 261866726 8535724 complement(3567..3818) 1 NC_013416.1 identified by Glimmer3; putative; putative DNA-binding protein 3818 8535724 D11S_0005 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA-binding protein YP_003254648.1 3567 R 668336 CDS YP_003254649.1 261866727 8535725 4314..4727 1 NC_013416.1 identified by Glimmer3; putative; putative transcription regulator 4727 8535725 D11S_0006 Aggregatibacter actinomycetemcomitans D11S-1 putative transcription regulator YP_003254649.1 4314 D 668336 CDS YP_003254650.1 261866728 8535726 complement(4746..4862) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 4862 8535726 D11S_0007 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254650.1 4746 R 668336 CDS YP_003254651.1 261866729 8535727 complement(5001..6176) 1 NC_013416.1 identified by Glimmer3; putative; 8-amino-7-oxononanoate synthase 6176 8535727 D11S_0008 Aggregatibacter actinomycetemcomitans D11S-1 8-amino-7-oxononanoate synthase YP_003254651.1 5001 R 668336 CDS YP_003254652.1 261866730 8535728 complement(6169..7299) 1 NC_013416.1 identified by Glimmer3; putative; adenosylmethionine-8-amino-7-oxononanoate transaminase 7299 8535728 D11S_0009 Aggregatibacter actinomycetemcomitans D11S-1 adenosylmethionine-8-amino-7-oxononanoate transaminase YP_003254652.1 6169 R 668336 CDS YP_003254653.1 261866731 8535729 complement(7263..7457) 1 NC_013416.1 identified by Glimmer3; putative; adenosylmethionine-8-amino-7-oxononanoate transaminase 7457 8535729 D11S_0010 Aggregatibacter actinomycetemcomitans D11S-1 adenosylmethionine-8-amino-7-oxononanoate transaminase YP_003254653.1 7263 R 668336 CDS YP_003254654.1 261866732 8535730 7680..8549 1 NC_013416.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 8549 psd 8535730 psd Aggregatibacter actinomycetemcomitans D11S-1 phosphatidylserine decarboxylase YP_003254654.1 7680 D 668336 CDS YP_003254655.1 261866733 8535731 8575..9207 1 NC_013416.1 identified by Glimmer3; putative; fkbp-type peptidyl-prolyl cis-trans isomerase fkpa 9207 8535731 D11S_0012 Aggregatibacter actinomycetemcomitans D11S-1 fkbp-type peptidyl-prolyl cis-trans isomerase fkpa YP_003254655.1 8575 D 668336 CDS YP_003254656.1 261866734 8535732 complement(9271..9513) 1 NC_013416.1 identified by Glimmer3; putative; glutamate 5-kinase 9513 8535732 D11S_0013 Aggregatibacter actinomycetemcomitans D11S-1 glutamate 5-kinase YP_003254656.1 9271 R 668336 CDS YP_003254657.1 261866735 8535733 complement(9507..10007) 1 NC_013416.1 identified by Glimmer3; putative; glutamate 5-kinase 10007 8535733 D11S_0014 Aggregatibacter actinomycetemcomitans D11S-1 glutamate 5-kinase YP_003254657.1 9507 R 668336 CDS YP_003254658.1 261866736 8535734 complement(10009..10185) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 10185 8535734 D11S_0015 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254658.1 10009 R 668336 CDS YP_003254659.1 261866737 8535735 10243..11028 1 NC_013416.1 identified by Glimmer3; putative; YjjP 11028 8535735 D11S_0016 Aggregatibacter actinomycetemcomitans D11S-1 YjjP YP_003254659.1 10243 D 668336 CDS YP_003254660.1 261866738 8535736 11030..11494 1 NC_013416.1 identified by Glimmer3; putative; YjjB 11494 8535736 D11S_0017 Aggregatibacter actinomycetemcomitans D11S-1 YjjB YP_003254660.1 11030 D 668336 CDS YP_003254661.1 261866739 8535737 11534..12019 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 12019 8535737 D11S_0018 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254661.1 11534 D 668336 CDS YP_003254662.1 261866740 8535738 complement(12139..13449) 1 NC_013416.1 identified by Glimmer3; putative; inner membrane protein YtfL 13449 8535738 D11S_0019 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane protein YtfL YP_003254662.1 12139 R 668336 CDS YP_003254663.1 261866741 8535739 13403..13543 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 13543 8535739 D11S_0020 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254663.1 13403 D 668336 CDS YP_003254664.1 261866742 8535740 complement(13540..14064) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 14064 8535740 D11S_0021 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254664.1 13540 R 668336 CDS YP_003254665.1 261866743 8535741 complement(14096..14878) 1 NC_013416.1 identified by Glimmer3; putative; putative deoxyribonuclease 14878 8535741 D11S_0022 Aggregatibacter actinomycetemcomitans D11S-1 putative deoxyribonuclease YP_003254665.1 14096 R 668336 CDS YP_003254666.1 261866744 8535742 complement(14882..15865) 1 NC_013416.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 15865 8535742 D11S_0023 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit delta' YP_003254666.1 14882 R 668336 CDS YP_003254667.1 261866745 8535743 complement(15862..16491) 1 NC_013416.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 16491 tmk 8535743 tmk Aggregatibacter actinomycetemcomitans D11S-1 thymidylate kinase YP_003254667.1 15862 R 668336 CDS YP_003254668.1 261866746 8535744 complement(16493..17536) 1 NC_013416.1 identified by Glimmer3; putative; pyrimidine regulatory protein PyrR 17536 8535744 D11S_0025 Aggregatibacter actinomycetemcomitans D11S-1 pyrimidine regulatory protein PyrR YP_003254668.1 16493 R 668336 CDS YP_003254669.1 261866747 8535745 complement(17675..18013) 1 NC_013416.1 identified by Glimmer3; putative; nitrogen regulatory protein P-II 18013 8535745 D11S_0026 Aggregatibacter actinomycetemcomitans D11S-1 nitrogen regulatory protein P-II YP_003254669.1 17675 R 668336 CDS YP_003254670.1 261866748 8535746 complement(18089..18847) 1 NC_013416.1 identified by Glimmer3; putative; GlpR protein 18847 8535746 D11S_0027 Aggregatibacter actinomycetemcomitans D11S-1 GlpR protein YP_003254670.1 18089 R 668336 CDS YP_003254671.1 261866749 8535747 18995..19945 1 NC_013416.1 identified by Glimmer3; putative; 3-hydroxyisobutyrate dehydrogenase 19945 8535747 D11S_0028 Aggregatibacter actinomycetemcomitans D11S-1 3-hydroxyisobutyrate dehydrogenase YP_003254671.1 18995 D 668336 CDS YP_003254672.1 261866750 8535748 19948..21192 1 NC_013416.1 identified by Glimmer3; putative; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 21192 8535748 D11S_0029 Aggregatibacter actinomycetemcomitans D11S-1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_003254672.1 19948 D 668336 CDS YP_003254673.1 261866751 8535749 21189..21821 1 NC_013416.1 identified by Glimmer3; putative; putative aldolase 21821 8535749 D11S_0030 Aggregatibacter actinomycetemcomitans D11S-1 putative aldolase YP_003254673.1 21189 D 668336 CDS YP_003254674.1 261866752 8535750 21824..22600 1 NC_013416.1 identified by Glimmer3; putative; hydroxypyruvate isomerase 22600 8535750 D11S_0031 Aggregatibacter actinomycetemcomitans D11S-1 hydroxypyruvate isomerase YP_003254674.1 21824 D 668336 CDS YP_003254675.1 261866753 8535751 22689..24041 1 NC_013416.1 identified by Glimmer3; putative; GntT protein 24041 8535751 D11S_0032 Aggregatibacter actinomycetemcomitans D11S-1 GntT protein YP_003254675.1 22689 D 668336 CDS YP_003254676.1 261866754 8535752 24066..25406 1 NC_013416.1 identified by Glimmer3; putative; phospholipase/carboxylesterase 25406 8535752 D11S_0033 Aggregatibacter actinomycetemcomitans D11S-1 phospholipase/carboxylesterase YP_003254676.1 24066 D 668336 CDS YP_003254677.1 261866755 8535753 25424..26116 1 NC_013416.1 identified by Glimmer3; putative; putative cyclase 26116 8535753 D11S_0034 Aggregatibacter actinomycetemcomitans D11S-1 putative cyclase YP_003254677.1 25424 D 668336 CDS YP_003254678.1 261866756 8535754 26164..27960 1 NC_013416.1 identified by Glimmer3; putative; Kmt1 27960 8535754 D11S_0035 Aggregatibacter actinomycetemcomitans D11S-1 Kmt1 YP_003254678.1 26164 D 668336 CDS YP_003254679.1 261866757 8535755 28156..28974 1 NC_013416.1 identified by Glimmer3; putative; phosphatase YbhA 28974 8535755 D11S_0036 Aggregatibacter actinomycetemcomitans D11S-1 phosphatase YbhA YP_003254679.1 28156 D 668336 CDS YP_003254680.1 261866758 8535756 complement(29180..31780) 1 NC_013416.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 31780 8535756 D11S_0037 Aggregatibacter actinomycetemcomitans D11S-1 DNA mismatch repair protein MutS YP_003254680.1 29180 R 668336 CDS YP_003254681.1 261866759 8535757 complement(31865..32911) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 32911 8535757 D11S_0038 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254681.1 31865 R 668336 CDS YP_003254682.1 261866760 8535758 complement(33098..33856) 1 NC_013416.1 identified by Glimmer3; putative; DNA polymerase I 33856 8535758 D11S_0039 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase I YP_003254682.1 33098 R 668336 CDS YP_003254683.1 261866761 8535759 complement(33858..34955) 1 NC_013416.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 34955 8535759 D11S_0040 Aggregatibacter actinomycetemcomitans D11S-1 tRNA (uracil-5-)-methyltransferase YP_003254683.1 33858 R 668336 CDS YP_003254684.1 261866762 8535760 complement(35025..35354) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 35354 8535760 D11S_0041 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254684.1 35025 R 668336 CDS YP_003254685.1 261866763 8535761 complement(35414..36031) 1 NC_013416.1 identified by Glimmer3; putative; thiol:disulfide interchange protein DsbA 36031 8535761 D11S_0042 Aggregatibacter actinomycetemcomitans D11S-1 thiol:disulfide interchange protein DsbA YP_003254685.1 35414 R 668336 CDS YP_003254686.1 261866764 8535762 complement(36050..36316) 1 NC_013416.1 identified by Glimmer3; putative; YihD 36316 8535762 D11S_0043 Aggregatibacter actinomycetemcomitans D11S-1 YihD YP_003254686.1 36050 R 668336 CDS YP_003254687.1 261866765 8535763 36400..36984 1 NC_013416.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 36984 mobA 8535763 mobA Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_003254687.1 36400 D 668336 CDS YP_003254688.1 261866766 8535764 37083..37613 1 NC_013416.1 identified by Glimmer3; putative; DNA polymerase III subunit delta' 37613 8535764 D11S_0045 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit delta' YP_003254688.1 37083 D 668336 CDS YP_003254689.1 261866767 8535765 37725..39254 1 NC_013416.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 39254 8535765 D11S_0046 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_003254689.1 37725 D 668336 CDS YP_003254690.1 261866768 8535766 39257..40198 1 NC_013416.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 40198 fruK 8535766 fruK Aggregatibacter actinomycetemcomitans D11S-1 1-phosphofructokinase YP_003254690.1 39257 D 668336 CDS YP_003254691.1 261866769 8535767 40203..41867 1 NC_013416.1 identified by Glimmer3; putative; PTS system fructose-specific transporter subunit IIBC 41867 8535767 D11S_0048 Aggregatibacter actinomycetemcomitans D11S-1 PTS system fructose-specific transporter subunit IIBC YP_003254691.1 40203 D 668336 CDS YP_003254692.1 261866770 8535768 41889..42167 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 42167 8535768 D11S_0049 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254692.1 41889 D 668336 CDS YP_003254693.1 261866771 8535769 42202..42333 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 42333 8535769 D11S_0050 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254693.1 42202 D 668336 CDS YP_003254694.1 261866772 8535770 complement(42385..42531) 1 NC_013416.1 identified by Glimmer3; putative; LysR family transcriptional regulator 42531 8535770 D11S_0051 Aggregatibacter actinomycetemcomitans D11S-1 LysR family transcriptional regulator YP_003254694.1 42385 R 668336 CDS YP_003254695.1 261866773 8535771 complement(42552..42884) 1 NC_013416.1 identified by Glimmer3; putative; LysR family transcriptional regulator 42884 8535771 D11S_0052 Aggregatibacter actinomycetemcomitans D11S-1 LysR family transcriptional regulator YP_003254695.1 42552 R 668336 CDS YP_003254696.1 261866774 8535772 42899..43450 1 NC_013416.1 identified by Glimmer3; putative; NAD(P)H dehydrogenase 43450 8535772 D11S_0053 Aggregatibacter actinomycetemcomitans D11S-1 NAD(P)H dehydrogenase YP_003254696.1 42899 D 668336 CDS YP_003254697.1 261866775 8535773 43532..43870 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 43870 8535773 D11S_0054 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254697.1 43532 D 668336 CDS YP_003254698.1 261866776 8535774 44016..44720 1 NC_013416.1 identified by Glimmer3; putative; Antibiotic biosynthesis monooxygenase 44720 8535774 D11S_0055 Aggregatibacter actinomycetemcomitans D11S-1 Antibiotic biosynthesis monooxygenase YP_003254698.1 44016 D 668336 CDS YP_003254699.1 261866777 8535775 45162..45572 1 NC_013416.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 45572 secE 8535775 secE Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecE YP_003254699.1 45162 D 668336 CDS YP_003254700.1 261866778 8535776 45574..46125 1 NC_013416.1 identified by Glimmer3; putative; transcription termination/antitermination factor NusG 46125 8535776 D11S_0057 Aggregatibacter actinomycetemcomitans D11S-1 transcription termination/antitermination factor NusG YP_003254700.1 45574 D 668336 CDS YP_003254701.1 261866779 8535777 46281..46709 1 NC_013416.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 46709 rplK 8535777 rplK Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L11 YP_003254701.1 46281 D 668336 CDS YP_003254702.1 261866780 8535778 46714..47403 1 NC_013416.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 47403 rplA 8535778 rplA Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L1 YP_003254702.1 46714 D 668336 CDS YP_003254703.1 261866781 8535779 47418..47594 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 47594 8535779 D11S_0060 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254703.1 47418 D 668336 CDS YP_003254704.1 261866782 8535780 47765..48256 1 NC_013416.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 48256 rplJ 8535780 rplJ Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L10 YP_003254704.1 47765 D 668336 CDS YP_003254705.1 261866783 8535781 48308..48679 1 NC_013416.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 48679 rplL 8535781 rplL Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L7/L12 YP_003254705.1 48308 D 668336 CDS YP_003254706.1 261866784 8535782 48950..52978 1 NC_013416.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 52978 rpoB 8535782 rpoB Aggregatibacter actinomycetemcomitans D11S-1 DNA-directed RNA polymerase subunit beta YP_003254706.1 48950 D 668336 CDS YP_003254707.1 261866785 8535783 53083..57351 1 NC_013416.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 57351 8535783 D11S_0064 Aggregatibacter actinomycetemcomitans D11S-1 DNA-directed RNA polymerase subunit beta' YP_003254707.1 53083 D 668336 CDS YP_003254708.1 261866786 8535784 complement(58114..58371) 1 NC_013416.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 58371 rpsQ 8535784 rpsQ Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S17 YP_003254708.1 58114 R 668336 CDS YP_003254709.1 261866787 8535785 complement(58371..58562) 1 NC_013416.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 58562 8535785 D11S_0066 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L29 YP_003254709.1 58371 R 668336 CDS YP_003254710.1 261866788 8535786 complement(58562..58972) 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L16 58972 8535786 D11S_0067 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L16 YP_003254710.1 58562 R 668336 CDS YP_003254711.1 261866789 8535787 complement(58986..59693) 1 NC_013416.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 59693 rpsC 8535787 rpsC Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S3 YP_003254711.1 58986 R 668336 CDS YP_003254712.1 261866790 8535788 complement(59710..60042) 1 NC_013416.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 60042 rplV 8535788 rplV Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L22 YP_003254712.1 59710 R 668336 CDS YP_003254713.1 261866791 8535789 complement(60053..60199) 1 NC_013416.1 identified by Glimmer3; putative; 30S ribosomal protein S19 60199 8535789 D11S_0070 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S19 YP_003254713.1 60053 R 668336 CDS YP_003254714.1 261866792 8535790 complement(60354..61175) 1 NC_013416.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 61175 rplB 8535790 rplB Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L2 YP_003254714.1 60354 R 668336 CDS YP_003254715.1 261866793 8535791 complement(61196..61498) 1 NC_013416.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 61498 rplW 8535791 rplW Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L23 YP_003254715.1 61196 R 668336 CDS YP_003254716.1 261866794 8535792 complement(61495..62097) 1 NC_013416.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 62097 rplD 8535792 rplD Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L4 YP_003254716.1 61495 R 668336 CDS YP_003254717.1 261866795 8535793 complement(62113..62739) 1 NC_013416.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 62739 rplC 8535793 rplC Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L3 YP_003254717.1 62113 R 668336 CDS YP_003254718.1 261866796 8535794 complement(62756..63067) 1 NC_013416.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 63067 rpsJ 8535794 rpsJ Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S10 YP_003254718.1 62756 R 668336 CDS YP_003254719.1 261866797 8535795 complement(63319..64215) 1 NC_013416.1 identified by Glimmer3; putative; putative HTH-type transcriptional regulator 64215 8535795 D11S_0076 Aggregatibacter actinomycetemcomitans D11S-1 putative HTH-type transcriptional regulator YP_003254719.1 63319 R 668336 CDS YP_003254720.1 261866798 8535796 64553..65143 1 NC_013416.1 identified by Glimmer3; putative; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha 65143 8535796 D11S_0077 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha YP_003254720.1 64553 D 668336 CDS YP_003254721.1 261866799 8535797 65155..65820 1 NC_013416.1 identified by Glimmer3; putative; membrane component of ABC transporter FtsEX 65820 8535797 D11S_0078 Aggregatibacter actinomycetemcomitans D11S-1 membrane component of ABC transporter FtsEX YP_003254721.1 65155 D 668336 CDS YP_003254722.1 261866800 8535798 65823..67166 1 NC_013416.1 identified by Glimmer3; putative; short chain fatty acids transporter 67166 8535798 D11S_0079 Aggregatibacter actinomycetemcomitans D11S-1 short chain fatty acids transporter YP_003254722.1 65823 D 668336 CDS YP_003254723.1 261866801 8535799 67184..68365 1 NC_013416.1 identified by Glimmer3; putative; acetyl-CoA acetyltransferase 68365 8535799 D11S_0080 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA acetyltransferase YP_003254723.1 67184 D 668336 CDS YP_003254724.1 261866802 8535800 complement(68463..68930) 1 NC_013416.1 identified by Glimmer3; putative; carbamate kinase 68930 8535800 D11S_0081 Aggregatibacter actinomycetemcomitans D11S-1 carbamate kinase YP_003254724.1 68463 R 668336 CDS YP_003254725.1 261866803 8535801 complement(69021..70550) 1 NC_013416.1 identified by Glimmer3; putative; C4-dicarboxylate anaerobic carrier DcuC 70550 8535801 D11S_0082 Aggregatibacter actinomycetemcomitans D11S-1 C4-dicarboxylate anaerobic carrier DcuC YP_003254725.1 69021 R 668336 CDS YP_003254726.1 261866804 8535802 complement(70667..71599) 1 NC_013416.1 reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; carbamate kinase 71599 8535802 D11S_0083 Aggregatibacter actinomycetemcomitans D11S-1 carbamate kinase YP_003254726.1 70667 R 668336 CDS YP_003254727.1 261866805 8535803 complement(71609..72613) 1 NC_013416.1 identified by Glimmer3; putative; ornithine carbamoyltransferase 72613 8535803 D11S_0084 Aggregatibacter actinomycetemcomitans D11S-1 ornithine carbamoyltransferase YP_003254727.1 71609 R 668336 CDS YP_003254728.1 261866806 8535804 72856..74247 1 NC_013416.1 identified by Glimmer3; putative; EriC protein 74247 8535804 D11S_0085 Aggregatibacter actinomycetemcomitans D11S-1 EriC protein YP_003254728.1 72856 D 668336 CDS YP_003254729.1 261866807 8535805 74250..75233 1 NC_013416.1 identified by Glimmer3; putative; tRNA-dihydrouridine synthase A 75233 8535805 D11S_0086 Aggregatibacter actinomycetemcomitans D11S-1 tRNA-dihydrouridine synthase A YP_003254729.1 74250 D 668336 CDS YP_003254730.1 261866808 8535806 complement(75289..76281) 1 NC_013416.1 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 76281 8535806 D11S_0087 Aggregatibacter actinomycetemcomitans D11S-1 asparagine synthetase AsnA YP_003254730.1 75289 R 668336 CDS YP_003254731.1 261866809 8535807 76447..76899 1 NC_013416.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 76899 8535807 D11S_0088 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional regulator AsnC YP_003254731.1 76447 D 668336 CDS YP_003254732.1 261866810 8535808 76933..77691 1 NC_013416.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 77691 8535808 D11S_0089 Aggregatibacter actinomycetemcomitans D11S-1 uridine phosphorylase YP_003254732.1 76933 D 668336 CDS YP_003254733.1 261866811 8535809 complement(77828..78889) 1 NC_013416.1 identified by Glimmer3; putative; PerM 78889 8535809 D11S_0090 Aggregatibacter actinomycetemcomitans D11S-1 PerM YP_003254733.1 77828 R 668336 CDS YP_003254734.1 261866812 8535810 78963..79313 1 NC_013416.1 identified by Glimmer3; putative; arsenate reductase 79313 8535810 D11S_0091 Aggregatibacter actinomycetemcomitans D11S-1 arsenate reductase YP_003254734.1 78963 D 668336 CDS YP_003254735.1 261866813 8535811 complement(79417..79779) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 79779 8535811 D11S_0092 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254735.1 79417 R 668336 CDS YP_003254736.1 261866814 8535812 complement(79730..80014) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 80014 8535812 D11S_0093 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254736.1 79730 R 668336 CDS YP_003254737.1 261866815 8535813 80223..81554 1 NC_013416.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 81554 rimO 8535813 rimO Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein S12 methylthiotransferase YP_003254737.1 80223 D 668336 CDS YP_003254738.1 261866816 8535814 81532..82083 1 NC_013416.1 identified by Glimmer3; putative; low molecular weight protein-tyrosine-phosphatase yfkj 82083 8535814 D11S_0095 Aggregatibacter actinomycetemcomitans D11S-1 low molecular weight protein-tyrosine-phosphatase yfkj YP_003254738.1 81532 D 668336 CDS YP_003254739.1 261866817 8535815 82210..82428 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 82428 8535815 D11S_0096 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254739.1 82210 D 668336 CDS YP_003254740.1 261866818 8535816 complement(82512..83108) 1 NC_013416.1 identified by Glimmer3; putative; fkbp-type peptidyl-prolyl cis-trans isomerase slyd 83108 8535816 D11S_0097 Aggregatibacter actinomycetemcomitans D11S-1 fkbp-type peptidyl-prolyl cis-trans isomerase slyd YP_003254740.1 82512 R 668336 CDS YP_003254741.1 261866819 8535817 complement(83203..83922) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 83922 8535817 D11S_0098 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254741.1 83203 R 668336 CDS YP_003254742.1 261866820 8535818 complement(83973..84407) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 84407 8535818 D11S_0099 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254742.1 83973 R 668336 CDS YP_003254743.1 261866821 8535819 complement(84502..84897) 1 NC_013416.1 identified by Glimmer3; putative; large conductance mechanosensitive channel 84897 8535819 D11S_0100 Aggregatibacter actinomycetemcomitans D11S-1 large conductance mechanosensitive channel YP_003254743.1 84502 R 668336 CDS YP_003254744.1 261866822 8535820 complement(85007..86383) 1 NC_013416.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane component 86383 trkA 8535820 trkA Aggregatibacter actinomycetemcomitans D11S-1 potassium transporter peripheral membrane component YP_003254744.1 85007 R 668336 CDS YP_003254745.1 261866823 8535821 complement(86407..87762) 1 NC_013416.1 identified by Glimmer3; putative; methionyl-tRNA formyltransferase 87762 8535821 D11S_0102 Aggregatibacter actinomycetemcomitans D11S-1 methionyl-tRNA formyltransferase YP_003254745.1 86407 R 668336 CDS YP_003254746.1 261866824 8535822 complement(87762..88718) 1 NC_013416.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 88718 fmt 8535822 fmt Aggregatibacter actinomycetemcomitans D11S-1 methionyl-tRNA formyltransferase YP_003254746.1 87762 R 668336 CDS YP_003254747.1 261866825 8535823 complement(88784..89296) 1 NC_013416.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 89296 def 8535823 def Aggregatibacter actinomycetemcomitans D11S-1 peptide deformylase YP_003254747.1 88784 R 668336 CDS YP_003254749.1 261866827 8535830 complement(95222..95779) 1 NC_013416.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 95779 8535830 D11S_0111 Aggregatibacter actinomycetemcomitans D11S-1 D,D-heptose 1,7-bisphosphate phosphatase YP_003254749.1 95222 R 668336 CDS YP_003254750.1 261866828 8535831 95976..97013 1 NC_013416.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 97013 metN 8535831 metN Aggregatibacter actinomycetemcomitans D11S-1 DL-methionine transporter ATP-binding subunit YP_003254750.1 95976 D 668336 CDS YP_003254751.1 261866829 8535832 97003..97680 1 NC_013416.1 identified by Glimmer3; putative; D-methionine transport system permease MetI 97680 8535832 D11S_0113 Aggregatibacter actinomycetemcomitans D11S-1 D-methionine transport system permease MetI YP_003254751.1 97003 D 668336 CDS YP_003254752.1 261866830 8535833 97715..98557 1 NC_013416.1 identified by Glimmer3; putative; D-methionine-binding lipoprotein MetQ 98557 8535833 D11S_0114 Aggregatibacter actinomycetemcomitans D11S-1 D-methionine-binding lipoprotein MetQ YP_003254752.1 97715 D 668336 CDS YP_003254753.1 261866831 8535834 98663..99160 1 NC_013416.1 identified by Glimmer3; putative; PEBP family protein 99160 8535834 D11S_0115 Aggregatibacter actinomycetemcomitans D11S-1 PEBP family protein YP_003254753.1 98663 D 668336 CDS YP_003254754.1 261866832 8535835 99279..99755 1 NC_013416.1 identified by Glimmer3; putative; TrmH family RNA methyltransferase 99755 8535835 D11S_0116 Aggregatibacter actinomycetemcomitans D11S-1 TrmH family RNA methyltransferase YP_003254754.1 99279 D 668336 CDS YP_003254755.1 261866833 8535836 complement(99851..100726) 1 NC_013416.1 identified by Glimmer3; putative; LapB 100726 8535836 D11S_0117 Aggregatibacter actinomycetemcomitans D11S-1 LapB YP_003254755.1 99851 R 668336 CDS YP_003254756.1 261866834 8535837 complement(100736..100849) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 100849 8535837 D11S_0118 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254756.1 100736 R 668336 CDS YP_003254757.1 261866835 8535838 100859..101473 1 NC_013416.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 101473 engB 8535838 engB Aggregatibacter actinomycetemcomitans D11S-1 ribosome biogenesis GTP-binding protein YsxC YP_003254757.1 100859 D 668336 CDS YP_003254758.1 261866836 8535839 101588..102454 1 NC_013416.1 identified by Glimmer3; putative; putative Mg chelatase-like protein 102454 8535839 D11S_0120 Aggregatibacter actinomycetemcomitans D11S-1 putative Mg chelatase-like protein YP_003254758.1 101588 D 668336 CDS YP_003254759.1 261866837 8535840 102557..104389 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 104389 8535840 D11S_0121 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254759.1 102557 D 668336 CDS YP_003254760.1 261866838 8535841 104398..105486 1 NC_013416.1 identified by Glimmer3; putative; putative phage associated protein 105486 8535841 D11S_0122 Aggregatibacter actinomycetemcomitans D11S-1 putative phage associated protein YP_003254760.1 104398 D 668336 CDS YP_003254761.1 261866839 8535842 105483..106481 1 NC_013416.1 identified by Glimmer3; putative; RelA/SpoT 106481 8535842 D11S_0123 Aggregatibacter actinomycetemcomitans D11S-1 RelA/SpoT YP_003254761.1 105483 D 668336 CDS YP_003254762.1 261866840 8535843 106696..109563 1 NC_013416.1 identified by Glimmer3; putative; helicase IV 109563 8535843 D11S_0124 Aggregatibacter actinomycetemcomitans D11S-1 helicase IV YP_003254762.1 106696 D 668336 CDS YP_003254763.1 261866841 8535844 109593..110831 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 110831 8535844 D11S_0125 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254763.1 109593 D 668336 CDS YP_003254764.1 261866842 8535845 110785..111570 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 111570 8535845 D11S_0126 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254764.1 110785 D 668336 CDS YP_003254765.1 261866843 8535846 111730..111942 1 NC_013416.1 identified by Glimmer3; putative; XRE family transcriptional regulator 111942 8535846 D11S_0127 Aggregatibacter actinomycetemcomitans D11S-1 XRE family transcriptional regulator YP_003254765.1 111730 D 668336 CDS YP_003254766.1 261866844 8535847 111954..112628 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 112628 8535847 D11S_0128 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254766.1 111954 D 668336 CDS YP_003254767.1 261866845 8535848 complement(112708..113184) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 113184 8535848 D11S_0129 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254767.1 112708 R 668336 CDS YP_003254768.1 261866846 8535849 complement(113314..115935) 1 NC_013416.1 identified by Glimmer3; putative; type III restriction enzyme 115935 8535849 D11S_0130 Aggregatibacter actinomycetemcomitans D11S-1 type III restriction enzyme YP_003254768.1 113314 R 668336 CDS YP_003254769.1 261866847 8535850 complement(115945..117585) 1 NC_013416.1 identified by Glimmer3; putative; adenine specific DNA methylase 117585 8535850 D11S_0131 Aggregatibacter actinomycetemcomitans D11S-1 adenine specific DNA methylase YP_003254769.1 115945 R 668336 CDS YP_003254770.1 261866848 8535851 complement(117598..117810) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 117810 8535851 D11S_0132 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254770.1 117598 R 668336 CDS YP_003254771.1 261866849 8535852 complement(117931..119355) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 119355 8535852 D11S_0133 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254771.1 117931 R 668336 CDS YP_003254772.1 261866850 8535853 complement(119352..120470) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 120470 8535853 D11S_0134 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254772.1 119352 R 668336 CDS YP_003254773.1 261866851 8535854 complement(120428..121321) 1 NC_013416.1 identified by Glimmer3; putative; Transposition helper protein 121321 8535854 D11S_0135 Aggregatibacter actinomycetemcomitans D11S-1 Transposition helper protein YP_003254773.1 120428 R 668336 CDS YP_003254774.1 261866852 8535855 complement(121321..123240) 1 NC_013416.1 identified by Glimmer3; putative; Putative transposase 123240 8535855 D11S_0136 Aggregatibacter actinomycetemcomitans D11S-1 Putative transposase YP_003254774.1 121321 R 668336 CDS YP_003254775.1 261866853 8535856 complement(123233..123895) 1 NC_013416.1 identified by Glimmer3; putative; TnsA endonuclease 123895 8535856 D11S_0137 Aggregatibacter actinomycetemcomitans D11S-1 TnsA endonuclease YP_003254775.1 123233 R 668336 CDS YP_003254776.1 261866854 8535857 124031..124735 1 NC_013416.1 identified by Glimmer3; putative; putative Mg chelatase-like protein 124735 8535857 D11S_0138 Aggregatibacter actinomycetemcomitans D11S-1 putative Mg chelatase-like protein YP_003254776.1 124031 D 668336 CDS YP_003254777.1 261866855 8535858 complement(124747..125574) 1 NC_013416.1 identified by Glimmer3; putative; divergent polysaccharide deacetylase superfamily protein 125574 8535858 D11S_0139 Aggregatibacter actinomycetemcomitans D11S-1 divergent polysaccharide deacetylase superfamily protein YP_003254777.1 124747 R 668336 CDS YP_003254778.1 261866856 8535859 complement(125571..126788) 1 NC_013416.1 identified by Glimmer3; putative; NlpD protein 126788 8535859 D11S_0140 Aggregatibacter actinomycetemcomitans D11S-1 NlpD protein YP_003254778.1 125571 R 668336 CDS YP_003254779.1 261866857 8535860 complement(127039..128697) 1 NC_013416.1 identified by Glimmer3; putative; phosphoglucomutase/phosphomannomutase 128697 8535860 D11S_0141 Aggregatibacter actinomycetemcomitans D11S-1 phosphoglucomutase/phosphomannomutase YP_003254779.1 127039 R 668336 CDS YP_003254780.1 261866858 8535861 129003..129686 1 NC_013416.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 129686 gpmA 8535861 gpmA Aggregatibacter actinomycetemcomitans D11S-1 phosphoglyceromutase YP_003254780.1 129003 D 668336 CDS YP_003254781.1 261866859 8535862 complement(129771..130265) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 130265 8535862 D11S_0143 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254781.1 129771 R 668336 CDS YP_003254782.1 261866860 8535863 complement(130283..131059) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein VacJ 131059 8535863 D11S_0144 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein VacJ YP_003254782.1 130283 R 668336 CDS YP_003254783.1 261866861 8535864 complement(131125..132708) 1 NC_013416.1 identified by Glimmer3; putative; nickel ABC transporter periplasmic nickel-binding protein 132708 8535864 D11S_0145 Aggregatibacter actinomycetemcomitans D11S-1 nickel ABC transporter periplasmic nickel-binding protein YP_003254783.1 131125 R 668336 CDS YP_003254784.1 261866862 8535865 complement(132774..134105) 1 NC_013416.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 134105 hslU 8535865 hslU Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent protease ATP-binding subunit HslU YP_003254784.1 132774 R 668336 CDS YP_003254785.1 261866863 8535866 complement(134126..134653) 1 NC_013416.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 134653 8535866 D11S_0147 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent protease peptidase subunit YP_003254785.1 134126 R 668336 CDS YP_003254786.1 261866864 8535867 134625..134765 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 134765 8535867 D11S_0148 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254786.1 134625 D 668336 CDS YP_003254787.1 261866865 8535868 134868..135575 1 NC_013416.1 Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; acid phosphatase/phosphotransferase 135575 aphA 8535868 aphA Aggregatibacter actinomycetemcomitans D11S-1 acid phosphatase/phosphotransferase YP_003254787.1 134868 D 668336 CDS YP_003254788.1 261866866 8535869 complement(135957..136070) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 136070 8535869 D11S_0150 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254788.1 135957 R 668336 CDS YP_003254789.1 261866867 8535870 complement(136140..136274) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 136274 8535870 D11S_0151 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254789.1 136140 R 668336 CDS YP_003254790.1 261866868 8535871 complement(136553..137797) 1 NC_013416.1 identified by Glimmer3; putative; Low affinity tryptophan permease 137797 8535871 D11S_0152 Aggregatibacter actinomycetemcomitans D11S-1 Low affinity tryptophan permease YP_003254790.1 136553 R 668336 CDS YP_003254791.1 261866869 8535872 137959..138486 1 NC_013416.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 138486 8535872 D11S_0153 Aggregatibacter actinomycetemcomitans D11S-1 inorganic pyrophosphatase YP_003254791.1 137959 D 668336 CDS YP_003254792.1 261866870 8535873 138562..139335 1 NC_013416.1 identified by Glimmer3; putative; HtpX protein 139335 8535873 D11S_0154 Aggregatibacter actinomycetemcomitans D11S-1 HtpX protein YP_003254792.1 138562 D 668336 CDS YP_003254793.1 261866871 8535874 140015..140659 1 NC_013416.1 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 140659 ribB 8535874 ribB Aggregatibacter actinomycetemcomitans D11S-1 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003254793.1 140015 D 668336 CDS YP_003254794.1 261866872 8535875 complement(140746..141750) 1 NC_013416.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 141750 8535875 D11S_0156 Aggregatibacter actinomycetemcomitans D11S-1 tryptophanyl-tRNA synthetase YP_003254794.1 140746 R 668336 CDS YP_003254795.1 261866873 8535876 complement(141925..143286) 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsY 143286 8535876 D11S_0157 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsY YP_003254795.1 141925 R 668336 CDS YP_003254796.1 261866874 8535877 143374..143958 1 NC_013416.1 identified by Glimmer3; putative; putative methyltransferase 143958 8535877 D11S_0158 Aggregatibacter actinomycetemcomitans D11S-1 putative methyltransferase YP_003254796.1 143374 D 668336 CDS YP_003254797.1 261866875 8535878 144245..145210 1 NC_013416.1 identified by Glimmer3; putative; PTS system mannose-specific transporter subunit IIAB 145210 8535878 D11S_0159 Aggregatibacter actinomycetemcomitans D11S-1 PTS system mannose-specific transporter subunit IIAB YP_003254797.1 144245 D 668336 CDS YP_003254798.1 261866876 8535879 145228..146025 1 NC_013416.1 identified by Glimmer3; putative; fructose permease iic component 146025 8535879 D11S_0160 Aggregatibacter actinomycetemcomitans D11S-1 fructose permease iic component YP_003254798.1 145228 D 668336 CDS YP_003254799.1 261866877 8535880 146039..146875 1 NC_013416.1 identified by Glimmer3; putative; mannose permease iid component 146875 8535880 D11S_0161 Aggregatibacter actinomycetemcomitans D11S-1 mannose permease iid component YP_003254799.1 146039 D 668336 CDS YP_003254800.1 261866878 8535881 146985..148160 1 NC_013416.1 identified by Glimmer3; putative; Cof protein 148160 8535881 D11S_0162 Aggregatibacter actinomycetemcomitans D11S-1 Cof protein YP_003254800.1 146985 D 668336 CDS YP_003254801.1 261866879 8535882 148452..149702 1 NC_013416.1 identified by Glimmer3; putative; pyrimidine nucleoside transport protein 149702 8535882 D11S_0163 Aggregatibacter actinomycetemcomitans D11S-1 pyrimidine nucleoside transport protein YP_003254801.1 148452 D 668336 CDS YP_003254802.1 261866880 8535883 149828..150547 1 NC_013416.1 identified by Glimmer3; putative; purine nucleoside phosphorylase 150547 8535883 D11S_0164 Aggregatibacter actinomycetemcomitans D11S-1 purine nucleoside phosphorylase YP_003254802.1 149828 D 668336 CDS YP_003254803.1 261866881 8535884 150595..150708 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 150708 8535884 D11S_0165 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254803.1 150595 D 668336 CDS YP_003254804.1 261866882 8535885 150850..153237 1 NC_013416.1 identified by Glimmer3; putative; PgaA 153237 8535885 D11S_0166 Aggregatibacter actinomycetemcomitans D11S-1 PgaA YP_003254804.1 150850 D 668336 CDS YP_003254805.1 261866883 8535886 153253..155169 1 NC_013416.1 identified by Glimmer3; putative; biofilm PGA synthesis lipoprotein PgaB 155169 8535886 D11S_0167 Aggregatibacter actinomycetemcomitans D11S-1 biofilm PGA synthesis lipoprotein PgaB YP_003254805.1 153253 D 668336 CDS YP_003254806.1 261866884 8535887 155178..156413 1 NC_013416.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 156413 8535887 D11S_0168 Aggregatibacter actinomycetemcomitans D11S-1 N-glycosyltransferase YP_003254806.1 155178 D 668336 CDS YP_003254807.1 261866885 8535888 156416..156709 1 NC_013416.1 identified by Glimmer3; putative; HmsD 156709 8535888 D11S_0169 Aggregatibacter actinomycetemcomitans D11S-1 HmsD YP_003254807.1 156416 D 668336 CDS YP_003254808.1 261866886 8535889 complement(156677..156799) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 156799 8535889 D11S_0170 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254808.1 156677 R 668336 CDS YP_003254809.1 261866887 8535890 complement(156827..158152) 1 NC_013416.1 identified by Glimmer3; putative; regulatory protein UhpC 158152 8535890 D11S_0171 Aggregatibacter actinomycetemcomitans D11S-1 regulatory protein UhpC YP_003254809.1 156827 R 668336 CDS YP_003254810.1 261866888 8535891 158323..158955 1 NC_013416.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 158955 8535891 D11S_0172 Aggregatibacter actinomycetemcomitans D11S-1 pyridoxamine 5'-phosphate oxidase YP_003254810.1 158323 D 668336 CDS YP_003254811.1 261866889 8535892 complement(159043..159687) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 159687 8535892 D11S_0173 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254811.1 159043 R 668336 CDS YP_003254812.1 261866890 8535893 complement(159715..160197) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 160197 8535893 D11S_0174 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254812.1 159715 R 668336 CDS YP_003254813.1 261866891 8535894 complement(160200..161228) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 161228 8535894 D11S_0175 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254813.1 160200 R 668336 CDS YP_003254814.1 261866892 8535895 complement(161658..162959) 1 NC_013416.1 identified by Glimmer3; putative; putative ATPase 162959 8535895 D11S_0176 Aggregatibacter actinomycetemcomitans D11S-1 putative ATPase YP_003254814.1 161658 R 668336 CDS YP_003254815.1 261866893 8535896 complement(163430..164761) 1 NC_013416.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 164761 8535896 D11S_0177 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent RNA helicase SrmB YP_003254815.1 163430 R 668336 CDS YP_003254816.1 261866894 8535897 164748..164876 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 164876 8535897 D11S_0178 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254816.1 164748 D 668336 CDS YP_003254817.1 261866895 8535898 164860..165558 1 NC_013416.1 identified by Glimmer3; putative; phosphatidylserine synthase 165558 8535898 D11S_0179 Aggregatibacter actinomycetemcomitans D11S-1 phosphatidylserine synthase YP_003254817.1 164860 D 668336 CDS YP_003254818.1 261866896 8535899 complement(165633..166322) 1 NC_013416.1 identified by Glimmer3; putative; PnuC transporter 166322 8535899 D11S_0180 Aggregatibacter actinomycetemcomitans D11S-1 PnuC transporter YP_003254818.1 165633 R 668336 CDS YP_003254819.1 261866897 8535900 166703..167362 1 NC_013416.1 identified by Glimmer3; putative; ribosomal large subunit pseudouridine synthase A 167362 8535900 D11S_0181 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal large subunit pseudouridine synthase A YP_003254819.1 166703 D 668336 CDS YP_003254820.1 261866898 8535901 complement(167359..167511) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 167511 8535901 D11S_0182 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254820.1 167359 R 668336 CDS YP_003254821.1 261866899 8535902 complement(167681..168187) 1 NC_013416.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 168187 8535902 D11S_0183 Aggregatibacter actinomycetemcomitans D11S-1 S-ribosylhomocysteinase YP_003254821.1 167681 R 668336 CDS YP_003254822.1 261866900 8535903 complement(168400..168885) 1 NC_013416.1 identified by Glimmer3; putative; glucose-inhibited division protein B 168885 8535903 D11S_0184 Aggregatibacter actinomycetemcomitans D11S-1 glucose-inhibited division protein B YP_003254822.1 168400 R 668336 CDS YP_003254823.1 261866901 8535904 complement(168888..169493) 1 NC_013416.1 identified by Glimmer3; putative; galactoside O-acetyltransferase 169493 8535904 D11S_0185 Aggregatibacter actinomycetemcomitans D11S-1 galactoside O-acetyltransferase YP_003254823.1 168888 R 668336 CDS YP_003254824.1 261866902 8535905 complement(169493..169906) 1 NC_013416.1 identified by Glimmer3; putative; phosphatase YqaB 169906 8535905 D11S_0186 Aggregatibacter actinomycetemcomitans D11S-1 phosphatase YqaB YP_003254824.1 169493 R 668336 CDS YP_003254825.1 261866903 8535906 complement(169927..170094) 1 NC_013416.1 identified by Glimmer3; putative; phosphatase YqaB 170094 8535906 D11S_0187 Aggregatibacter actinomycetemcomitans D11S-1 phosphatase YqaB YP_003254825.1 169927 R 668336 CDS YP_003254826.1 261866904 8535907 170223..170603 1 NC_013416.1 identified by Glimmer3; putative; S-ribosylhomocysteinase 170603 8535907 D11S_0188 Aggregatibacter actinomycetemcomitans D11S-1 S-ribosylhomocysteinase YP_003254826.1 170223 D 668336 CDS YP_003254827.1 261866905 8535911 complement(171119..173134) 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent DNA helicase Rep 173134 8535911 D11S_0192 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent DNA helicase Rep YP_003254827.1 171119 R 668336 CDS YP_003254828.1 261866906 8535912 complement(173144..173374) 1 NC_013416.1 identified by Glimmer3; putative; aspartate-semialdehyde dehydrogenase 173374 8535912 D11S_0193 Aggregatibacter actinomycetemcomitans D11S-1 aspartate-semialdehyde dehydrogenase YP_003254828.1 173144 R 668336 CDS YP_003254829.1 261866907 8535913 complement(173478..174041) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 18/16 174041 8535913 D11S_0194 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein 18/16 YP_003254829.1 173478 R 668336 CDS YP_003254830.1 261866908 8535914 174258..177059 1 NC_013416.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 177059 8535914 D11S_0195 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase I YP_003254830.1 174258 D 668336 CDS YP_003254831.1 261866909 8535915 177074..177196 1 NC_013416.1 identified by Glimmer3; putative; dsbh domain containing protein 177196 8535915 D11S_0196 Aggregatibacter actinomycetemcomitans D11S-1 dsbh domain containing protein YP_003254831.1 177074 D 668336 CDS YP_003254832.1 261866910 8535916 177446..177793 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 177793 8535916 D11S_0197 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003254832.1 177446 D 668336 CDS YP_003254833.1 261866911 8535917 complement(177899..179713) 1 NC_013416.1 identified by Glimmer3; putative; NAD nucleotidase 179713 8535917 D11S_0198 Aggregatibacter actinomycetemcomitans D11S-1 NAD nucleotidase YP_003254833.1 177899 R 668336 CDS YP_003254834.1 261866912 8535918 complement(179740..180516) 1 NC_013416.1 identified by Glimmer3; putative; shikimate kinase 180516 8535918 D11S_0199 Aggregatibacter actinomycetemcomitans D11S-1 shikimate kinase YP_003254834.1 179740 R 668336 CDS YP_003254835.1 261866913 8535919 complement(180654..180773) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 180773 8535919 D11S_0200 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254835.1 180654 R 668336 CDS YP_003254836.1 261866914 8535920 180795..181721 1 NC_013416.1 identified by Glimmer3; putative; ADP-glyceromanno-heptose 6-epimerase 181721 8535920 D11S_0201 Aggregatibacter actinomycetemcomitans D11S-1 ADP-glyceromanno-heptose 6-epimerase YP_003254836.1 180795 D 668336 CDS YP_003254837.1 261866915 8535921 181891..183018 1 NC_013416.1 identified by Glimmer3; putative; filamentation induced by cAMP protein Fic 183018 8535921 D11S_0202 Aggregatibacter actinomycetemcomitans D11S-1 filamentation induced by cAMP protein Fic YP_003254837.1 181891 D 668336 CDS YP_003254838.1 261866916 8535922 183038..184081 1 NC_013416.1 identified by Glimmer3; putative; lipopolysaccharide heptosyltransferase II 184081 8535922 D11S_0203 Aggregatibacter actinomycetemcomitans D11S-1 lipopolysaccharide heptosyltransferase II YP_003254838.1 183038 D 668336 CDS YP_003254839.1 261866917 8535923 184199..186094 1 NC_013416.1 catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 186094 8535923 D11S_0204 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_003254839.1 184199 D 668336 CDS YP_003254840.1 261866918 8535924 complement(186180..186815) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type protein TorC 186815 8535924 D11S_0205 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type protein TorC YP_003254840.1 186180 R 668336 CDS YP_003254841.1 261866919 8535925 complement(186829..187278) 1 NC_013416.1 identified by Glimmer3; putative; periplasmiC nitrate reductase, diheme cytochrome c subunit 187278 8535925 D11S_0206 Aggregatibacter actinomycetemcomitans D11S-1 periplasmiC nitrate reductase, diheme cytochrome c subunit YP_003254841.1 186829 R 668336 CDS YP_003254842.1 261866920 8535926 complement(187316..188197) 1 NC_013416.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 188197 napH 8535926 napH Aggregatibacter actinomycetemcomitans D11S-1 quinol dehydrogenase membrane component YP_003254842.1 187316 R 668336 CDS YP_003254843.1 261866921 8535927 complement(188197..189057) 1 NC_013416.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 189057 napG 8535927 napG Aggregatibacter actinomycetemcomitans D11S-1 quinol dehydrogenase periplasmic component YP_003254843.1 188197 R 668336 CDS YP_003254844.1 261866922 8535928 complement(189084..191570) 1 NC_013416.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 191570 8535928 D11S_0209 Aggregatibacter actinomycetemcomitans D11S-1 nitrate reductase catalytic subunit YP_003254844.1 189084 R 668336 CDS YP_003254845.1 261866923 8535929 complement(191604..191888) 1 NC_013416.1 identified by Glimmer3; putative; NapD protein 191888 8535929 D11S_0210 Aggregatibacter actinomycetemcomitans D11S-1 NapD protein YP_003254845.1 191604 R 668336 CDS YP_003254846.1 261866924 8535930 complement(191955..192119) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 192119 8535930 D11S_0211 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254846.1 191955 R 668336 CDS YP_003254847.1 261866925 8535931 192165..193868 1 NC_013416.1 identified by Glimmer3; putative; nitrate/nitrite sensor protein NarQ 193868 8535931 D11S_0212 Aggregatibacter actinomycetemcomitans D11S-1 nitrate/nitrite sensor protein NarQ YP_003254847.1 192165 D 668336 CDS YP_003254848.1 261866926 8535932 193883..194908 1 NC_013416.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 194908 murB 8535932 murB Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003254848.1 193883 D 668336 CDS YP_003254849.1 261866927 8535933 194924..195238 1 NC_013416.1 identified by Glimmer3; putative; RNA polymerase factor sigma-32 195238 8535933 D11S_0214 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase factor sigma-32 YP_003254849.1 194924 D 668336 CDS YP_003254850.1 261866928 8535934 195423..196271 1 NC_013416.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 196271 8535934 D11S_0215 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase factor sigma-32 YP_003254850.1 195423 D 668336 CDS YP_003254851.1 261866929 8535935 complement(196338..196973) 1 NC_013416.1 identified by Glimmer3; putative; DNA transformation protein TfoX 196973 8535935 D11S_0216 Aggregatibacter actinomycetemcomitans D11S-1 DNA transformation protein TfoX YP_003254851.1 196338 R 668336 CDS YP_003254852.1 261866930 8535936 complement(197012..197137) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 197137 8535936 D11S_0217 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254852.1 197012 R 668336 CDS YP_003254853.1 261866931 8535937 complement(198260..198709) 1 NC_013416.1 identified by Glimmer3; putative; translation elongation factor Tu 198709 8535937 D11S_0218 Aggregatibacter actinomycetemcomitans D11S-1 translation elongation factor Tu YP_003254853.1 198260 R 668336 CDS YP_003254854.1 261866932 8535938 complement(198909..199436) 1 NC_013416.1 identified by Glimmer3; putative; elongation factor Tu 199436 8535938 D11S_0219 Aggregatibacter actinomycetemcomitans D11S-1 elongation factor Tu YP_003254854.1 198909 R 668336 CDS YP_003254855.1 261866933 8535939 complement(199500..201602) 1 NC_013416.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 201602 8535939 D11S_0220 Aggregatibacter actinomycetemcomitans D11S-1 elongation factor G YP_003254855.1 199500 R 668336 CDS YP_003254856.1 261866934 8535940 complement(201717..202187) 1 NC_013416.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 202187 8535940 D11S_0221 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S7 YP_003254856.1 201717 R 668336 CDS YP_003254857.2 350234643 8535941 complement(202340..202714) 1 NC_013416.1 identified by Glimmer3; putative; 30S ribosomal protein S12 202714 8535941 D11S_0222 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S12 YP_003254857.2 202340 R 668336 CDS YP_003254858.1 261866936 8535942 complement(202714..202854) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 202854 8535942 D11S_0223 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254858.1 202714 R 668336 CDS YP_003254859.1 261866937 8535943 complement(202942..203241) 1 NC_013416.1 identified by Glimmer3; putative; ketol-acid reductoisomerase 203241 8535943 D11S_0224 Aggregatibacter actinomycetemcomitans D11S-1 ketol-acid reductoisomerase YP_003254859.1 202942 R 668336 CDS YP_003254860.1 261866938 8535944 203882..204067 1 NC_013416.1 identified by Glimmer3; putative; HTH-type transcriptional regulator IlvY 204067 8535944 D11S_0225 Aggregatibacter actinomycetemcomitans D11S-1 HTH-type transcriptional regulator IlvY YP_003254860.1 203882 D 668336 CDS YP_003254861.1 261866939 8535945 204100..204981 1 NC_013416.1 identified by Glimmer3; putative; shikimate 5-dehydrogenase 204981 8535945 D11S_0226 Aggregatibacter actinomycetemcomitans D11S-1 shikimate 5-dehydrogenase YP_003254861.1 204100 D 668336 CDS YP_003254862.1 261866940 8535946 complement(204976..205776) 1 NC_013416.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 205776 aroE 8535946 aroE Aggregatibacter actinomycetemcomitans D11S-1 shikimate 5-dehydrogenase YP_003254862.1 204976 R 668336 CDS YP_003254863.1 261866941 8535947 complement(205780..206331) 1 NC_013416.1 identified by Glimmer3; putative; protein YrdC 206331 8535947 D11S_0228 Aggregatibacter actinomycetemcomitans D11S-1 protein YrdC YP_003254863.1 205780 R 668336 CDS YP_003254864.1 261866942 8535948 complement(206336..206884) 1 NC_013416.1 identified by Glimmer3; putative; DNA topoisomerase I 206884 8535948 D11S_0229 Aggregatibacter actinomycetemcomitans D11S-1 DNA topoisomerase I YP_003254864.1 206336 R 668336 CDS YP_003254865.1 261866943 8535949 206887..208641 1 NC_013416.1 identified by Glimmer3; putative; DNA recombination protein RmuC 208641 8535949 D11S_0230 Aggregatibacter actinomycetemcomitans D11S-1 DNA recombination protein RmuC YP_003254865.1 206887 D 668336 CDS YP_003254866.1 261866944 8535950 208766..209314 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 209314 8535950 D11S_0231 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254866.1 208766 D 668336 CDS YP_003254867.1 261866945 8535951 209326..209652 1 NC_013416.1 identified by Glimmer3; putative; aspartate-semialdehyde dehydrogenase 209652 8535951 D11S_0232 Aggregatibacter actinomycetemcomitans D11S-1 aspartate-semialdehyde dehydrogenase YP_003254867.1 209326 D 668336 CDS YP_003254868.1 261866946 8535952 complement(209664..209978) 1 NC_013416.1 identified by Glimmer3; putative; thiosulfate sulfurtransferase GlpE 209978 8535952 D11S_0233 Aggregatibacter actinomycetemcomitans D11S-1 thiosulfate sulfurtransferase GlpE YP_003254868.1 209664 R 668336 CDS YP_003254869.1 261866947 8535953 210021..210896 1 NC_013416.1 identified by Glimmer3; putative; GlpG protein 210896 8535953 D11S_0234 Aggregatibacter actinomycetemcomitans D11S-1 GlpG protein YP_003254869.1 210021 D 668336 CDS YP_003254870.1 261866948 8535954 210958..211713 1 NC_013416.1 identified by Glimmer3; putative; putative HTH-type transcriptional regulator YihW 211713 8535954 D11S_0235 Aggregatibacter actinomycetemcomitans D11S-1 putative HTH-type transcriptional regulator YihW YP_003254870.1 210958 D 668336 CDS YP_003254871.1 261866949 8535955 212056..213648 1 NC_013416.1 identified by Glimmer3; putative; heme utilization protein 213648 8535955 D11S_0236 Aggregatibacter actinomycetemcomitans D11S-1 heme utilization protein YP_003254871.1 212056 D 668336 CDS YP_003254872.1 261866950 8535956 213685..214782 1 NC_013416.1 identified by Glimmer3; putative; heme-utilization protein Hup 214782 8535956 D11S_0237 Aggregatibacter actinomycetemcomitans D11S-1 heme-utilization protein Hup YP_003254872.1 213685 D 668336 CDS YP_003254873.1 261866951 8535957 complement(215372..217189) 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter ATP-binding protein 217189 8535957 D11S_0238 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter ATP-binding protein YP_003254873.1 215372 R 668336 CDS YP_003254874.1 261866952 8535958 217313..218971 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 218971 8535958 D11S_0239 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254874.1 217313 D 668336 CDS YP_003254875.1 261866953 8535959 complement(218939..219070) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 219070 8535959 D11S_0240 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254875.1 218939 R 668336 CDS YP_003254876.1 261866954 8535960 219128..219841 1 NC_013416.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 219841 pyrH 8535960 pyrH Aggregatibacter actinomycetemcomitans D11S-1 uridylate kinase YP_003254876.1 219128 D 668336 CDS YP_003254877.1 261866955 8535961 219909..220052 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 220052 8535961 D11S_0242 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254877.1 219909 D 668336 CDS YP_003254878.1 261866956 8535962 220066..220623 1 NC_013416.1 identified by Glimmer3; putative; ribosome recycling factor 220623 8535962 D11S_0243 Aggregatibacter actinomycetemcomitans D11S-1 ribosome recycling factor YP_003254878.1 220066 D 668336 CDS YP_003254879.1 261866957 8535963 220652..221935 1 NC_013416.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 221935 8535963 D11S_0244 Aggregatibacter actinomycetemcomitans D11S-1 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003254879.1 220652 D 668336 CDS YP_003254880.1 261866958 8535964 221957..222676 1 NC_013416.1 identified by Glimmer3; putative; di-trans,poly-cis-decaprenylcistransferase 222676 8535964 D11S_0245 Aggregatibacter actinomycetemcomitans D11S-1 di-trans,poly-cis-decaprenylcistransferase YP_003254880.1 221957 D 668336 CDS YP_003254881.1 261866959 8535965 222691..223560 1 NC_013416.1 identified by Glimmer3; putative; phosphatidate cytidylyltransferase 223560 8535965 D11S_0246 Aggregatibacter actinomycetemcomitans D11S-1 phosphatidate cytidylyltransferase YP_003254881.1 222691 D 668336 CDS YP_003254882.1 261866960 8535966 223569..224903 1 NC_013416.1 identified by Glimmer3; putative; RIP metalloprotease RseP 224903 8535966 D11S_0247 Aggregatibacter actinomycetemcomitans D11S-1 RIP metalloprotease RseP YP_003254882.1 223569 D 668336 CDS YP_003254883.1 261866961 8535967 224922..227333 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein assembly complex, YaeT protein 227333 8535967 D11S_0248 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein assembly complex, YaeT protein YP_003254883.1 224922 D 668336 CDS YP_003254884.1 261866962 8535968 227438..228013 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 26 228013 8535968 D11S_0249 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein 26 YP_003254884.1 227438 D 668336 CDS YP_003254885.1 261866963 8535969 228013..229035 1 NC_013416.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 229035 lpxD 8535969 lpxD Aggregatibacter actinomycetemcomitans D11S-1 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_003254885.1 228013 D 668336 CDS YP_003254886.1 261866964 8535970 229172..229582 1 NC_013416.1 identified by Glimmer3; putative; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 229582 8535970 D11S_0251 Aggregatibacter actinomycetemcomitans D11S-1 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_003254886.1 229172 D 668336 CDS YP_003254887.1 261866965 8535971 229603..230391 1 NC_013416.1 identified by Glimmer3; putative; acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase 230391 8535971 D11S_0252 Aggregatibacter actinomycetemcomitans D11S-1 acyl-[acyl-carrier-protein]-UDP-N- acetylglucosamine O-acyltransferase YP_003254887.1 229603 D 668336 CDS YP_003254888.1 261866966 8535972 230476..231660 1 NC_013416.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 231660 lpxB 8535972 lpxB Aggregatibacter actinomycetemcomitans D11S-1 lipid-A-disaccharide synthase YP_003254888.1 230476 D 668336 CDS YP_003254889.1 261866967 8535973 231653..232252 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease HII 232252 8535973 D11S_0254 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease HII YP_003254889.1 231653 D 668336 CDS YP_003254890.1 261866968 8535974 232292..233842 1 NC_013416.1 identified by Glimmer3; putative; CitT protein 233842 8535974 D11S_0255 Aggregatibacter actinomycetemcomitans D11S-1 CitT protein YP_003254890.1 232292 D 668336 CDS YP_003254891.1 261866969 8535975 233846..234160 1 NC_013416.1 identified by Glimmer3; putative; CitT protein 234160 8535975 D11S_0256 Aggregatibacter actinomycetemcomitans D11S-1 CitT protein YP_003254891.1 233846 D 668336 CDS YP_003254892.1 261866970 8535976 234171..234779 1 NC_013416.1 identified by Glimmer3; putative; CDP-alcohol phosphatidyltransferase 234779 8535976 D11S_0257 Aggregatibacter actinomycetemcomitans D11S-1 CDP-alcohol phosphatidyltransferase YP_003254892.1 234171 D 668336 CDS YP_003254893.1 261866971 8535977 234790..235422 1 NC_013416.1 identified by Glimmer3; putative; acyltransferase 235422 8535977 D11S_0258 Aggregatibacter actinomycetemcomitans D11S-1 acyltransferase YP_003254893.1 234790 D 668336 CDS YP_003254894.1 261866972 8535978 235422..236351 1 NC_013416.1 identified by Glimmer3; putative; phosphatidate cytidylyltransferase 236351 8535978 D11S_0259 Aggregatibacter actinomycetemcomitans D11S-1 phosphatidate cytidylyltransferase YP_003254894.1 235422 D 668336 CDS YP_003254895.1 261866973 8535979 236441..237022 1 NC_013416.1 identified by Glimmer3; putative; molybdopterin biosynthesis mog protein 237022 8535979 D11S_0260 Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin biosynthesis mog protein YP_003254895.1 236441 D 668336 CDS YP_003254897.1 261866975 8535986 244498..245451 1 NC_013416.1 identified by Glimmer3; putative; transaldolase B 245451 8535986 D11S_0267 Aggregatibacter actinomycetemcomitans D11S-1 transaldolase B YP_003254897.1 244498 D 668336 CDS YP_003254898.1 261866976 8535987 245470..247581 1 NC_013416.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 247581 8535987 D11S_0268 Aggregatibacter actinomycetemcomitans D11S-1 transketolase YP_003254898.1 245470 D 668336 CDS YP_003254899.1 261866977 8535988 complement(247653..248042) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 248042 8535988 D11S_0269 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254899.1 247653 R 668336 CDS YP_003254900.1 261866978 8535989 complement(248119..248577) 1 NC_013416.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 248577 recX 8535989 recX Aggregatibacter actinomycetemcomitans D11S-1 recombination regulator RecX YP_003254900.1 248119 R 668336 CDS YP_003254901.1 261866979 8535990 complement(248659..249717) 1 NC_013416.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 249717 recA 8535990 recA Aggregatibacter actinomycetemcomitans D11S-1 recombinase A YP_003254901.1 248659 R 668336 CDS YP_003254902.1 261866980 8535991 complement(249865..251790) 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter ATP-binding protein 251790 8535991 D11S_0272 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter ATP-binding protein YP_003254902.1 249865 R 668336 CDS YP_003254903.1 261866981 8535992 251871..252488 1 NC_013416.1 identified by Glimmer3; putative; MarC family integral membrane protein 252488 8535992 D11S_0273 Aggregatibacter actinomycetemcomitans D11S-1 MarC family integral membrane protein YP_003254903.1 251871 D 668336 CDS YP_003254904.1 261866982 8535993 252594..255329 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 255329 8535993 D11S_0274 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254904.1 252594 D 668336 CDS YP_003254905.1 261866983 8535994 255326..255556 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 255556 8535994 D11S_0275 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254905.1 255326 D 668336 CDS YP_003254906.1 261866984 8535995 256270..256461 1 NC_013416.1 identified by Glimmer3; putative; integrase 256461 8535995 D11S_0276 Aggregatibacter actinomycetemcomitans D11S-1 integrase YP_003254906.1 256270 D 668336 CDS YP_003254907.1 261866985 8535996 256548..256673 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 256673 8535996 D11S_0277 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254907.1 256548 D 668336 CDS YP_003254908.1 261866986 8535997 256694..257053 1 NC_013416.1 identified by Glimmer3; putative; transposase 257053 8535997 D11S_0278 Aggregatibacter actinomycetemcomitans D11S-1 transposase YP_003254908.1 256694 D 668336 CDS YP_003254909.1 261866987 8535998 257619..258290 1 NC_013416.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 258290 8535998 D11S_0279 Aggregatibacter actinomycetemcomitans D11S-1 deoxyribose-phosphate aldolase YP_003254909.1 257619 D 668336 CDS YP_003254910.1 261866988 8535999 258318..259067 1 NC_013416.1 identified by Glimmer3; putative; deoxyribose operon repressor 259067 8535999 D11S_0280 Aggregatibacter actinomycetemcomitans D11S-1 deoxyribose operon repressor YP_003254910.1 258318 D 668336 CDS YP_003254911.1 261866989 8536000 259205..260296 1 NC_013416.1 identified by Glimmer3; putative; transporter 260296 8536000 D11S_0281 Aggregatibacter actinomycetemcomitans D11S-1 transporter YP_003254911.1 259205 D 668336 CDS YP_003254912.1 261866990 8536001 complement(260449..261819) 1 NC_013416.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 261819 glmU 8536001 glmU Aggregatibacter actinomycetemcomitans D11S-1 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_003254912.1 260449 R 668336 CDS YP_003254913.1 261866991 8536002 261905..263035 1 NC_013416.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 263035 anmK 8536002 anmK Aggregatibacter actinomycetemcomitans D11S-1 anhydro-N-acetylmuramic acid kinase YP_003254913.1 261905 D 668336 CDS YP_003254914.1 261866992 8536003 263032..263946 1 NC_013416.1 identified by Glimmer3; putative; N-acetylmuramic acid 6-phosphate etherase 263946 8536003 D11S_0284 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylmuramic acid 6-phosphate etherase YP_003254914.1 263032 D 668336 CDS YP_003254915.1 261866993 8536004 complement(264058..264483) 1 NC_013416.1 identified by Glimmer3; putative; RelA/SpoT domain-containing protein 264483 8536004 D11S_0285 Aggregatibacter actinomycetemcomitans D11S-1 RelA/SpoT domain-containing protein YP_003254915.1 264058 R 668336 CDS YP_003254916.1 261866994 8536005 complement(265184..265627) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 265627 8536005 D11S_0286 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254916.1 265184 R 668336 CDS YP_003254917.1 261866995 8536006 265889..267253 1 NC_013416.1 identified by Glimmer3; putative; patatin 267253 8536006 D11S_0287 Aggregatibacter actinomycetemcomitans D11S-1 patatin YP_003254917.1 265889 D 668336 CDS YP_003254918.1 261866996 8536007 267378..268673 1 NC_013416.1 identified by Glimmer3; putative; gamma-glutamylputrescine oxidoreductase 268673 8536007 D11S_0288 Aggregatibacter actinomycetemcomitans D11S-1 gamma-glutamylputrescine oxidoreductase YP_003254918.1 267378 D 668336 CDS YP_003254919.1 261866997 8536008 268799..269578 1 NC_013416.1 identified by Glimmer3; putative; L-cystine-binding protein TcyA 269578 8536008 D11S_0289 Aggregatibacter actinomycetemcomitans D11S-1 L-cystine-binding protein TcyA YP_003254919.1 268799 D 668336 CDS YP_003254920.1 261866998 8536009 269562..270284 1 NC_013416.1 identified by Glimmer3; putative; glutamine-binding periplasmic protein/glutamine transport system permease 270284 8536009 D11S_0290 Aggregatibacter actinomycetemcomitans D11S-1 glutamine-binding periplasmic protein/glutamine transport system permease YP_003254920.1 269562 D 668336 CDS YP_003254921.1 261866999 8536010 270294..271061 1 NC_013416.1 identified by Glimmer3; putative; L-cystine import ATP-binding protein TcyN 271061 8536010 D11S_0291 Aggregatibacter actinomycetemcomitans D11S-1 L-cystine import ATP-binding protein TcyN YP_003254921.1 270294 D 668336 CDS YP_003254922.1 261867000 8536011 complement(271066..271353) 1 NC_013416.1 identified by Glimmer3; putative; sulfur relay protein TusB/DsrH 271353 8536011 D11S_0292 Aggregatibacter actinomycetemcomitans D11S-1 sulfur relay protein TusB/DsrH YP_003254922.1 271066 R 668336 CDS YP_003254923.1 261867001 8536012 complement(271356..271718) 1 NC_013416.1 identified by Glimmer3; putative; sulfur relay protein TusC/DsrF 271718 8536012 D11S_0293 Aggregatibacter actinomycetemcomitans D11S-1 sulfur relay protein TusC/DsrF YP_003254923.1 271356 R 668336 CDS YP_003254924.1 261867002 8536013 complement(271715..272092) 1 NC_013416.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 272092 8536013 D11S_0294 Aggregatibacter actinomycetemcomitans D11S-1 sulfur transfer complex subunit TusD YP_003254924.1 271715 R 668336 CDS YP_003254925.1 261867003 8536014 complement(272096..272764) 1 NC_013416.1 identified by Glimmer3; putative; DNA-binding protein 272764 8536014 D11S_0295 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding protein YP_003254925.1 272096 R 668336 CDS YP_003254926.1 261867004 8536015 complement(272844..273569) 1 NC_013416.1 identified by Glimmer3; putative; fkbp-type peptidyl-prolyl cis-trans isomerase fkpa 273569 8536015 D11S_0296 Aggregatibacter actinomycetemcomitans D11S-1 fkbp-type peptidyl-prolyl cis-trans isomerase fkpa YP_003254926.1 272844 R 668336 CDS YP_003254927.1 261867005 8536016 273664..273879 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 273879 8536016 D11S_0297 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254927.1 273664 D 668336 CDS YP_003254928.1 261867006 8536017 complement(273940..274668) 1 NC_013416.1 identified by Glimmer3; putative; hybrid peroxiredoxin hyPrx5 274668 8536017 D11S_0298 Aggregatibacter actinomycetemcomitans D11S-1 hybrid peroxiredoxin hyPrx5 YP_003254928.1 273940 R 668336 CDS YP_003254929.1 261867007 8536018 274827..275726 1 NC_013416.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 275726 8536018 D11S_0299 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional regulator OxyR YP_003254929.1 274827 D 668336 CDS YP_003254930.1 261867008 8536019 275738..276358 1 NC_013416.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 276358 8536019 D11S_0300 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional repressor FabR YP_003254930.1 275738 D 668336 CDS YP_003254931.1 261867009 8536020 complement(276470..278104) 1 NC_013416.1 identified by Glimmer3; putative; shikimate 5-dehydrogenase 278104 8536020 D11S_0301 Aggregatibacter actinomycetemcomitans D11S-1 shikimate 5-dehydrogenase YP_003254931.1 276470 R 668336 CDS YP_003254932.1 261867010 8536021 complement(278121..279869) 1 NC_013416.1 identified by Glimmer3; putative; CydD 279869 8536021 D11S_0302 Aggregatibacter actinomycetemcomitans D11S-1 CydD YP_003254932.1 278121 R 668336 CDS YP_003254933.1 261867011 8536022 complement(280038..281360) 1 NC_013416.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 281360 8536022 D11S_0303 Aggregatibacter actinomycetemcomitans D11S-1 anaerobic C4-dicarboxylate transporter YP_003254933.1 280038 R 668336 CDS YP_003254934.1 261867012 8536023 281705..282127 1 NC_013416.1 identified by Glimmer3; putative; PspE protein 282127 8536023 D11S_0304 Aggregatibacter actinomycetemcomitans D11S-1 PspE protein YP_003254934.1 281705 D 668336 CDS YP_003254935.1 261867013 8536024 282143..282655 1 NC_013416.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 282655 8536024 D11S_0305 Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecB YP_003254935.1 282143 D 668336 CDS YP_003254936.1 261867014 8536025 282750..283730 1 NC_013416.1 identified by Glimmer3; putative; glycerol-3-phosphate dehydrogenase 283730 8536025 D11S_0306 Aggregatibacter actinomycetemcomitans D11S-1 glycerol-3-phosphate dehydrogenase YP_003254936.1 282750 D 668336 CDS YP_003254937.1 261867015 8536026 283733..284530 1 NC_013416.1 identified by Glimmer3; putative; serine acetyltransferase 1 284530 8536026 D11S_0307 Aggregatibacter actinomycetemcomitans D11S-1 serine acetyltransferase 1 YP_003254937.1 283733 D 668336 CDS YP_003254938.1 261867016 8536027 complement(284578..284709) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 284709 8536027 D11S_0308 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254938.1 284578 R 668336 CDS YP_003254939.1 261867017 8536028 284730..285134 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 285134 8536028 D11S_0309 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003254939.1 284730 D 668336 CDS YP_003254940.1 261867018 8536029 complement(285172..286185) 1 NC_013416.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 286185 glpX 8536029 glpX Aggregatibacter actinomycetemcomitans D11S-1 fructose 1,6-bisphosphatase II YP_003254940.1 285172 R 668336 CDS YP_003254941.1 261867019 8536030 286381..286599 1 NC_013416.1 identified by Glimmer3; putative; transcriptional regulator 286599 8536030 D11S_0311 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulator YP_003254941.1 286381 D 668336 CDS YP_003254942.1 261867020 8536031 286656..287099 1 NC_013416.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 287099 8536031 D11S_0312 Aggregatibacter actinomycetemcomitans D11S-1 flavodoxin YP_003254942.1 286656 D 668336 CDS YP_003254943.1 261867021 8536032 287542..289431 1 NC_013416.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 289431 8536032 D11S_0313 Aggregatibacter actinomycetemcomitans D11S-1 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_003254943.1 287542 D 668336 CDS YP_003254944.1 261867022 8536033 complement(289703..290461) 1 NC_013416.1 identified by Glimmer3; putative; NmrA family protein 290461 8536033 D11S_0314 Aggregatibacter actinomycetemcomitans D11S-1 NmrA family protein YP_003254944.1 289703 R 668336 CDS YP_003254945.1 261867023 8536034 290712..291074 1 NC_013416.1 identified by Glimmer3; putative; HxlR family transcriptional regulator 291074 8536034 D11S_0315 Aggregatibacter actinomycetemcomitans D11S-1 HxlR family transcriptional regulator YP_003254945.1 290712 D 668336 CDS YP_003254946.1 261867024 8536035 291067..291750 1 NC_013416.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 291750 gidB 8536035 gidB Aggregatibacter actinomycetemcomitans D11S-1 16S rRNA methyltransferase GidB YP_003254946.1 291067 D 668336 CDS YP_003254947.1 261867025 8536036 291862..292239 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 292239 8536036 D11S_0317 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit I YP_003254947.1 291862 D 668336 CDS YP_003254948.1 261867026 8536037 292264..293052 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 293052 8536037 D11S_0318 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit A YP_003254948.1 292264 D 668336 CDS YP_003254949.1 261867027 8536038 293106..293360 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 293360 8536038 D11S_0319 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit C YP_003254949.1 293106 D 668336 CDS YP_003254950.1 261867028 8536039 293410..293880 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 293880 8536039 D11S_0320 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit B YP_003254950.1 293410 D 668336 CDS YP_003254951.1 261867029 8536040 293894..294442 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 294442 8536040 D11S_0321 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit delta YP_003254951.1 293894 D 668336 CDS YP_003254952.1 261867030 8536041 294455..295996 1 NC_013416.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 295996 8536041 D11S_0322 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit alpha YP_003254952.1 294455 D 668336 CDS YP_003254953.1 261867031 8536042 296012..296881 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 296881 8536042 D11S_0323 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit gamma YP_003254953.1 296012 D 668336 CDS YP_003254954.1 261867032 8536043 296898..298271 1 NC_013416.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 298271 8536043 D11S_0324 Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit beta YP_003254954.1 296898 D 668336 CDS YP_003254955.1 261867033 8536044 298313..298741 1 NC_013416.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 298741 atpC 8536044 atpC Aggregatibacter actinomycetemcomitans D11S-1 F0F1 ATP synthase subunit epsilon YP_003254955.1 298313 D 668336 CDS YP_003254956.1 261867034 8536045 complement(298802..299848) 1 NC_013416.1 identified by Glimmer3; putative; spermidine/putrescine-binding periplasmic protein 2 299848 8536045 D11S_0326 Aggregatibacter actinomycetemcomitans D11S-1 spermidine/putrescine-binding periplasmic protein 2 YP_003254956.1 298802 R 668336 CDS YP_003254957.1 261867035 8536046 299853..300005 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 300005 8536046 D11S_0327 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254957.1 299853 D 668336 CDS YP_003254958.1 261867036 8536047 300154..302295 1 NC_013416.1 identified by Glimmer3; putative; putative type I restriction enzyme 302295 8536047 D11S_0328 Aggregatibacter actinomycetemcomitans D11S-1 putative type I restriction enzyme YP_003254958.1 300154 D 668336 CDS YP_003254959.1 261867037 8536048 302360..303142 1 NC_013416.1 identified by Glimmer3; putative; putative type I restriction enzyme 303142 8536048 D11S_0329 Aggregatibacter actinomycetemcomitans D11S-1 putative type I restriction enzyme YP_003254959.1 302360 D 668336 CDS YP_003254960.1 261867038 8536049 303191..304180 1 NC_013416.1 identified by Glimmer3; putative; virulence protein 304180 8536049 D11S_0330 Aggregatibacter actinomycetemcomitans D11S-1 virulence protein YP_003254960.1 303191 D 668336 CDS YP_003254961.1 261867039 8536050 304389..305342 1 NC_013416.1 identified by Glimmer3; putative; restriction modification system DNA specificity subunit 305342 8536050 D11S_0331 Aggregatibacter actinomycetemcomitans D11S-1 restriction modification system DNA specificity subunit YP_003254961.1 304389 D 668336 CDS YP_003254962.1 261867040 8536051 305323..305517 1 NC_013416.1 identified by Glimmer3; putative; restriction endonuclease S 305517 8536051 D11S_0332 Aggregatibacter actinomycetemcomitans D11S-1 restriction endonuclease S YP_003254962.1 305323 D 668336 CDS YP_003254963.1 261867041 8536052 305618..307222 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 307222 8536052 D11S_0333 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254963.1 305618 D 668336 CDS YP_003254964.1 261867042 8536053 complement(307403..308146) 1 NC_013416.1 identified by Glimmer3; putative; mannose-specific PTS system protein IID 308146 8536053 D11S_0334 Aggregatibacter actinomycetemcomitans D11S-1 mannose-specific PTS system protein IID YP_003254964.1 307403 R 668336 CDS YP_003254965.1 261867043 8536054 complement(308255..309058) 1 NC_013416.1 identified by Glimmer3; putative; PTS system mannose/fructose/sorbose family IIC subunit 309058 8536054 D11S_0335 Aggregatibacter actinomycetemcomitans D11S-1 PTS system mannose/fructose/sorbose family IIC subunit YP_003254965.1 308255 R 668336 CDS YP_003254966.1 261867044 8536055 complement(309070..310068) 1 NC_013416.1 identified by Glimmer3; putative; PTS system mannose-specific EIIAB component 310068 8536055 D11S_0336 Aggregatibacter actinomycetemcomitans D11S-1 PTS system mannose-specific EIIAB component YP_003254966.1 309070 R 668336 CDS YP_003254967.1 261867045 8536056 310354..311811 1 NC_013416.1 identified by Glimmer3; putative; inner membrane transport protein YieO 311811 8536056 D11S_0337 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane transport protein YieO YP_003254967.1 310354 D 668336 CDS YP_003254968.1 261867046 8536057 complement(311838..313010) 1 NC_013416.1 identified by Glimmer3; putative; AraC family transcriptional regulator 313010 8536057 D11S_0338 Aggregatibacter actinomycetemcomitans D11S-1 AraC family transcriptional regulator YP_003254968.1 311838 R 668336 CDS YP_003254969.1 261867047 8536058 312999..313121 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 313121 8536058 D11S_0339 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254969.1 312999 D 668336 CDS YP_003254970.1 261867048 8536059 complement(313125..314108) 1 NC_013416.1 identified by Glimmer3; putative; Na+/H+ antiporter NhaC 314108 8536059 D11S_0340 Aggregatibacter actinomycetemcomitans D11S-1 Na+/H+ antiporter NhaC YP_003254970.1 313125 R 668336 CDS YP_003254971.1 261867049 8536060 complement(314139..314468) 1 NC_013416.1 identified by Glimmer3; putative; Na+/H+ antiporter NhaC 314468 8536060 D11S_0341 Aggregatibacter actinomycetemcomitans D11S-1 Na+/H+ antiporter NhaC YP_003254971.1 314139 R 668336 CDS YP_003254972.1 261867050 8536061 complement(314521..315717) 1 NC_013416.1 identified by Glimmer3; putative; aminotransferase 315717 8536061 D11S_0342 Aggregatibacter actinomycetemcomitans D11S-1 aminotransferase YP_003254972.1 314521 R 668336 CDS YP_003254973.1 261867051 8536062 complement(315727..316794) 1 NC_013416.1 identified by Glimmer3; putative; monosaccharide-transporting ATPase 316794 8536062 D11S_0343 Aggregatibacter actinomycetemcomitans D11S-1 monosaccharide-transporting ATPase YP_003254973.1 315727 R 668336 CDS YP_003254974.1 261867052 8536063 complement(316798..318309) 1 NC_013416.1 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 318309 8536063 D11S_0344 Aggregatibacter actinomycetemcomitans D11S-1 xylose transporter ATP-binding subunit YP_003254974.1 316798 R 668336 CDS YP_003254975.1 261867053 8536064 complement(318369..319367) 1 NC_013416.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 319367 xylF 8536064 xylF Aggregatibacter actinomycetemcomitans D11S-1 D-xylose transporter subunit XylF YP_003254975.1 318369 R 668336 CDS YP_003254976.1 261867054 8536065 319625..320944 1 NC_013416.1 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 320944 8536065 D11S_0346 Aggregatibacter actinomycetemcomitans D11S-1 xylose isomerase YP_003254976.1 319625 D 668336 CDS YP_003254977.1 261867055 8536066 320993..322465 1 NC_013416.1 identified by Glimmer3; putative; xylulose kinase 322465 8536066 D11S_0347 Aggregatibacter actinomycetemcomitans D11S-1 xylulose kinase YP_003254977.1 320993 D 668336 CDS YP_003254978.1 261867056 8536068 complement(322656..322775) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 322775 8536068 D11S_0349 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254978.1 322656 R 668336 CDS YP_003254979.1 261867057 8536069 323103..323267 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 323267 8536069 D11S_0350 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003254979.1 323103 D 668336 CDS YP_003254980.1 261867058 8536070 323271..324077 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 324077 8536070 D11S_0351 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003254980.1 323271 D 668336 CDS YP_003254981.1 261867059 8536071 complement(324117..325484) 1 NC_013416.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 325484 pssA 8536071 pssA Aggregatibacter actinomycetemcomitans D11S-1 phosphatidylserine synthase YP_003254981.1 324117 R 668336 CDS YP_003254982.1 261867060 8536072 325670..326746 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent RNA helicase SrmB 326746 8536072 D11S_0353 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent RNA helicase SrmB YP_003254982.1 325670 D 668336 CDS YP_003254983.1 261867061 8536073 complement(326812..327033) 1 NC_013416.1 identified by Glimmer3; putative; NapF protein 327033 8536073 D11S_0354 Aggregatibacter actinomycetemcomitans D11S-1 NapF protein YP_003254983.1 326812 R 668336 CDS YP_003254984.1 261867062 8536074 327140..327835 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease T2 family 327835 8536074 D11S_0355 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease T2 family YP_003254984.1 327140 D 668336 CDS YP_003254985.1 261867063 8536075 327948..329111 1 NC_013416.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 329111 pgk 8536075 pgk Aggregatibacter actinomycetemcomitans D11S-1 phosphoglycerate kinase YP_003254985.1 327948 D 668336 CDS YP_003254986.1 261867064 8536076 329176..330255 1 NC_013416.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 330255 8536076 D11S_0357 Aggregatibacter actinomycetemcomitans D11S-1 fructose-bisphosphate aldolase YP_003254986.1 329176 D 668336 CDS YP_003254987.1 261867065 8536077 complement(330268..330429) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 330429 8536077 D11S_0358 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003254987.1 330268 R 668336 CDS YP_003254988.1 261867066 8536078 330292..331605 1 NC_013416.1 identified by Glimmer3; putative; RfaL protein 331605 8536078 D11S_0359 Aggregatibacter actinomycetemcomitans D11S-1 RfaL protein YP_003254988.1 330292 D 668336 CDS YP_003254989.1 261867067 8536079 331598..332521 1 NC_013416.1 identified by Glimmer3; putative; CrcB protein 332521 8536079 D11S_0360 Aggregatibacter actinomycetemcomitans D11S-1 CrcB protein YP_003254989.1 331598 D 668336 CDS YP_003254990.1 261867068 8536080 complement(332559..333377) 1 NC_013416.1 identified by Glimmer3; putative; protein cof 333377 8536080 D11S_0361 Aggregatibacter actinomycetemcomitans D11S-1 protein cof YP_003254990.1 332559 R 668336 CDS YP_003254991.1 261867069 8536081 333664..334548 1 NC_013416.1 identified by Glimmer3; putative; acetolactate synthase, large subunit, biosynthetic type 334548 8536081 D11S_0362 Aggregatibacter actinomycetemcomitans D11S-1 acetolactate synthase, large subunit, biosynthetic type YP_003254991.1 333664 D 668336 CDS YP_003254992.1 261867070 8536082 334622..335029 1 NC_013416.1 identified by Glimmer3; putative; threonine dehydratase 335029 8536082 D11S_0363 Aggregatibacter actinomycetemcomitans D11S-1 threonine dehydratase YP_003254992.1 334622 D 668336 CDS YP_003254993.1 261867071 8536083 335080..335496 1 NC_013416.1 identified by Glimmer3; putative; threonine ammonia-lyase 335496 8536083 D11S_0364 Aggregatibacter actinomycetemcomitans D11S-1 threonine ammonia-lyase YP_003254993.1 335080 D 668336 CDS YP_003254994.1 261867072 8536084 complement(335630..336565) 1 NC_013416.1 putative ABC transporter, membrane protein; cell division protein FtsX 336565 ftsX 8536084 ftsX Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsX YP_003254994.1 335630 R 668336 CDS YP_003254995.1 261867073 8536085 complement(336574..337224) 1 NC_013416.1 identified by Glimmer3; putative; cell division ATP-binding protein FtsE 337224 8536085 D11S_0366 Aggregatibacter actinomycetemcomitans D11S-1 cell division ATP-binding protein FtsE YP_003254995.1 336574 R 668336 CDS YP_003254996.1 261867074 8536086 complement(337516..338190) 1 NC_013416.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 338190 8536086 D11S_0367 Aggregatibacter actinomycetemcomitans D11S-1 phosphoglycolate phosphatase YP_003254996.1 337516 R 668336 CDS YP_003254997.1 261867075 8536087 complement(338193..338867) 1 NC_013416.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 338867 8536087 D11S_0368 Aggregatibacter actinomycetemcomitans D11S-1 ribulose-phosphate 3-epimerase YP_003254997.1 338193 R 668336 CDS YP_003254998.1 261867076 8536088 339019..339297 1 NC_013416.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 339297 ftsB 8536088 ftsB Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsB YP_003254998.1 339019 D 668336 CDS YP_003254999.1 261867077 8536089 339297..339992 1 NC_013416.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 339992 ispD 8536089 ispD Aggregatibacter actinomycetemcomitans D11S-1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_003254999.1 339297 D 668336 CDS YP_003255000.1 261867078 8536090 339989..340468 1 NC_013416.1 identified by Glimmer3; putative; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 340468 8536090 D11S_0371 Aggregatibacter actinomycetemcomitans D11S-1 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003255000.1 339989 D 668336 CDS YP_003255001.1 261867079 8536091 340465..341475 1 NC_013416.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 341475 truD 8536091 truD Aggregatibacter actinomycetemcomitans D11S-1 tRNA pseudouridine synthase D YP_003255001.1 340465 D 668336 CDS YP_003255002.1 261867080 8536092 341508..342248 1 NC_013416.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 342248 surE 8536092 surE Aggregatibacter actinomycetemcomitans D11S-1 stationary phase survival protein SurE YP_003255002.1 341508 D 668336 CDS YP_003255003.1 261867081 8536093 342276..342851 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein B 342851 8536093 D11S_0374 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein B YP_003255003.1 342276 D 668336 CDS YP_003255004.1 261867082 8536094 342866..343057 1 NC_013416.1 identified by Glimmer3; putative; outer membrane antigenic lipoprotein B 343057 8536094 D11S_0375 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane antigenic lipoprotein B YP_003255004.1 342866 D 668336 CDS YP_003255005.1 261867083 8536095 343074..344243 1 NC_013416.1 identified by Glimmer3; putative; outer membrane antigenic lipoprotein B 344243 8536095 D11S_0376 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane antigenic lipoprotein B YP_003255005.1 343074 D 668336 CDS YP_003255006.1 261867084 8536096 complement(344488..344667) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 344667 8536096 D11S_0377 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255006.1 344488 R 668336 CDS YP_003255007.1 261867085 8536097 complement(344940..345701) 1 NC_013416.1 identified by Glimmer3; putative; lipopolysaccharide core biosynthesis glycosyltransferase KdtX 345701 8536097 D11S_0378 Aggregatibacter actinomycetemcomitans D11S-1 lipopolysaccharide core biosynthesis glycosyltransferase KdtX YP_003255007.1 344940 R 668336 CDS YP_003255008.1 261867086 8536098 345800..347083 1 NC_013416.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 347083 8536098 D11S_0379 Aggregatibacter actinomycetemcomitans D11S-1 3-deoxy-D-manno-octulosonic-acid transferase YP_003255008.1 345800 D 668336 CDS YP_003255009.1 261867087 8536099 347084..347578 1 NC_013416.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 347578 coaD 8536099 coaD Aggregatibacter actinomycetemcomitans D11S-1 phosphopantetheine adenylyltransferase YP_003255009.1 347084 D 668336 CDS YP_003255010.1 261867088 8536100 complement(347627..348352) 1 NC_013416.1 catalyzes the phosphorylation of 3-deoxy-D-manno-octulosonic acid at the 4-OH position; 3-deoxy-D-manno-octulosonic-acid kinase 348352 8536100 D11S_0381 Aggregatibacter actinomycetemcomitans D11S-1 3-deoxy-D-manno-octulosonic-acid kinase YP_003255010.1 347627 R 668336 CDS YP_003255011.1 261867089 8536101 348441..349484 1 NC_013416.1 identified by Glimmer3; putative; lipopolysaccharide biosynthesis protein 349484 8536101 D11S_0382 Aggregatibacter actinomycetemcomitans D11S-1 lipopolysaccharide biosynthesis protein YP_003255011.1 348441 D 668336 CDS YP_003255012.1 261867090 8536102 complement(349581..349922) 1 NC_013416.1 identified by Glimmer3; putative; alkylhydroperoxidase AhpD core 349922 8536102 D11S_0383 Aggregatibacter actinomycetemcomitans D11S-1 alkylhydroperoxidase AhpD core YP_003255012.1 349581 R 668336 CDS YP_003255013.1 261867091 8536103 350026..350943 1 NC_013416.1 identified by Glimmer3; putative; MtrA 350943 8536103 D11S_0384 Aggregatibacter actinomycetemcomitans D11S-1 MtrA YP_003255013.1 350026 D 668336 CDS YP_003255014.1 261867092 8536104 351031..352875 1 NC_013416.1 identified by Glimmer3; putative; MdlB protein 352875 8536104 D11S_0385 Aggregatibacter actinomycetemcomitans D11S-1 MdlB protein YP_003255014.1 351031 D 668336 CDS YP_003255015.1 261867093 8536105 complement(352916..355354) 1 NC_013416.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 355354 8536105 D11S_0386 Aggregatibacter actinomycetemcomitans D11S-1 glycerol-3-phosphate acyltransferase YP_003255015.1 352916 R 668336 CDS YP_003255016.1 261867094 8536106 355562..356185 1 NC_013416.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 356185 8536106 D11S_0387 Aggregatibacter actinomycetemcomitans D11S-1 LexA repressor YP_003255016.1 355562 D 668336 CDS YP_003255017.1 261867095 8536107 complement(356160..356285) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 356285 8536107 D11S_0388 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255017.1 356160 R 668336 CDS YP_003255018.1 261867096 8536108 356337..356714 1 NC_013416.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 356714 rpsF 8536108 rpsF Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S6 YP_003255018.1 356337 D 668336 CDS YP_003255019.1 261867097 8536109 356701..357027 1 NC_013416.1 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 357027 8536109 D11S_0390 Aggregatibacter actinomycetemcomitans D11S-1 primosomal replication protein N YP_003255019.1 356701 D 668336 CDS YP_003255020.1 261867098 8536110 357040..357270 1 NC_013416.1 identified by Glimmer3; putative; 30S ribosomal protein S18 357270 8536110 D11S_0391 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S18 YP_003255020.1 357040 D 668336 CDS YP_003255021.1 261867099 8536111 357286..357735 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L9 357735 8536111 D11S_0392 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L9 YP_003255021.1 357286 D 668336 CDS YP_003255022.1 261867100 8536112 357955..359073 1 NC_013416.1 identified by Glimmer3; putative; DNA-processing chain A 359073 8536112 D11S_0393 Aggregatibacter actinomycetemcomitans D11S-1 DNA-processing chain A YP_003255022.1 357955 D 668336 CDS YP_003255023.1 261867101 8536113 complement(359130..360212) 1 NC_013416.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 360212 glpQ 8536113 glpQ Aggregatibacter actinomycetemcomitans D11S-1 glycerophosphodiester phosphodiesterase YP_003255023.1 359130 R 668336 CDS YP_003255024.1 261867102 8536114 complement(360446..361888) 1 NC_013416.1 identified by Glimmer3; putative; glycerol-3-phosphate transporter 361888 8536114 D11S_0395 Aggregatibacter actinomycetemcomitans D11S-1 glycerol-3-phosphate transporter YP_003255024.1 360446 R 668336 CDS YP_003255025.1 261867103 8536115 complement(361907..362077) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 362077 8536115 D11S_0396 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255025.1 361907 R 668336 CDS YP_003255026.1 261867104 8536116 complement(362221..362958) 1 NC_013416.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 362958 8536116 D11S_0397 Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA (guanosine-2'-O-)-methyltransferase YP_003255026.1 362221 R 668336 CDS YP_003255027.1 261867105 8536117 complement(362955..365360) 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease R 365360 8536117 D11S_0398 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease R YP_003255027.1 362955 R 668336 CDS YP_003255028.1 261867106 8536118 365610..366665 1 NC_013416.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 366665 8536118 D11S_0399 Aggregatibacter actinomycetemcomitans D11S-1 rod shape-determining protein MreB YP_003255028.1 365610 D 668336 CDS YP_003255029.1 261867107 8536119 366735..367808 1 NC_013416.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 367808 8536119 D11S_0400 Aggregatibacter actinomycetemcomitans D11S-1 rod shape-determining protein MreC YP_003255029.1 366735 D 668336 CDS YP_003255030.1 261867108 8536120 367808..368296 1 NC_013416.1 identified by Glimmer3; putative; MreD protein 368296 8536120 D11S_0401 Aggregatibacter actinomycetemcomitans D11S-1 MreD protein YP_003255030.1 367808 D 668336 CDS YP_003255031.1 261867109 8536121 complement(368406..368756) 1 NC_013416.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 368756 rplS 8536121 rplS Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L19 YP_003255031.1 368406 R 668336 CDS YP_003255032.1 261867110 8536122 complement(368782..369531) 1 NC_013416.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 369531 trmD 8536122 trmD Aggregatibacter actinomycetemcomitans D11S-1 tRNA (guanine-N(1)-)-methyltransferase YP_003255032.1 368782 R 668336 CDS YP_003255033.1 261867111 8536123 complement(369597..370124) 1 NC_013416.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 370124 rimM 8536123 rimM Aggregatibacter actinomycetemcomitans D11S-1 16S rRNA-processing protein RimM YP_003255033.1 369597 R 668336 CDS YP_003255034.1 261867112 8536124 complement(370150..370398) 1 NC_013416.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 370398 rpsP 8536124 rpsP Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S16 YP_003255034.1 370150 R 668336 CDS YP_003255035.1 261867113 8536125 complement(370452..370580) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 370580 8536125 D11S_0406 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255035.1 370452 R 668336 CDS YP_003255036.1 261867114 8536126 370584..370739 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 370739 8536126 D11S_0407 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255036.1 370584 D 668336 CDS YP_003255037.1 261867115 8536127 complement(370893..372179) 1 NC_013416.1 identified by Glimmer3; putative; Xaa-Pro aminopeptidase 372179 8536127 D11S_0408 Aggregatibacter actinomycetemcomitans D11S-1 Xaa-Pro aminopeptidase YP_003255037.1 370893 R 668336 CDS YP_003255038.1 261867116 8536128 complement(372209..372757) 1 NC_013416.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 372757 8536128 D11S_0409 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255038.1 372209 R 668336 CDS YP_003255039.1 261867117 8536129 372916..373242 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 373242 8536129 D11S_0410 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255039.1 372916 D 668336 CDS YP_003255040.1 261867118 8536130 373536..374111 1 NC_013416.1 identified by Glimmer3; putative; 5-formyltetrahydrofolate cyclo-ligase 374111 8536130 D11S_0411 Aggregatibacter actinomycetemcomitans D11S-1 5-formyltetrahydrofolate cyclo-ligase YP_003255040.1 373536 D 668336 CDS YP_003255041.1 261867119 8536131 complement(374148..374936) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 374936 8536131 D11S_0412 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255041.1 374148 R 668336 CDS YP_003255042.1 261867120 8536132 375043..376017 1 NC_013416.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 376017 rluD 8536132 rluD Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA pseudouridine synthase D YP_003255042.1 375043 D 668336 CDS YP_003255043.1 261867121 8536133 376019..376756 1 NC_013416.1 identified by Glimmer3; putative; 23S rRNA pseudouridine synthase D 376756 8536133 D11S_0414 Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA pseudouridine synthase D YP_003255043.1 376019 D 668336 CDS YP_003255044.1 261867122 8536134 complement(376926..378899) 1 NC_013416.1 identified by Glimmer3; putative; excinuclease ABC subunit B 378899 8536134 D11S_0415 Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ABC subunit B YP_003255044.1 376926 R 668336 CDS YP_003255045.1 261867123 8536135 complement(378964..379623) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 379623 8536135 D11S_0416 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255045.1 378964 R 668336 CDS YP_003255046.1 261867124 8536136 complement(379740..380033) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 380033 8536136 D11S_0417 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255046.1 379740 R 668336 CDS YP_003255047.1 261867125 8536137 complement(380059..380619) 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein 380619 8536137 D11S_0418 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein YP_003255047.1 380059 R 668336 CDS YP_003255048.1 261867126 8536138 complement(380635..381582) 1 NC_013416.1 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 381582 8536138 D11S_0419 Aggregatibacter actinomycetemcomitans D11S-1 magnesium/nickel/cobalt transporter CorA YP_003255048.1 380635 R 668336 CDS YP_003255049.1 261867127 8536139 complement(382235..383035) 1 NC_013416.1 identified by Glimmer3; putative; methyltransferase domain-containing protein 383035 8536139 D11S_0420 Aggregatibacter actinomycetemcomitans D11S-1 methyltransferase domain-containing protein YP_003255049.1 382235 R 668336 CDS YP_003255050.1 261867128 8536140 383089..383220 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 383220 8536140 D11S_0421 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255050.1 383089 D 668336 CDS YP_003255051.1 261867129 8536141 complement(383189..386287) 1 NC_013416.1 identified by Glimmer3; putative; acriflavine resistance protein 386287 8536141 D11S_0422 Aggregatibacter actinomycetemcomitans D11S-1 acriflavine resistance protein YP_003255051.1 383189 R 668336 CDS YP_003255052.1 261867130 8536142 complement(386301..387491) 1 NC_013416.1 identified by Glimmer3; putative; AcrA protein 387491 8536142 D11S_0423 Aggregatibacter actinomycetemcomitans D11S-1 AcrA protein YP_003255052.1 386301 R 668336 CDS YP_003255053.1 261867131 8536143 complement(387517..388083) 1 NC_013416.1 identified by Glimmer3; putative; AcrR protein 388083 8536143 D11S_0424 Aggregatibacter actinomycetemcomitans D11S-1 AcrR protein YP_003255053.1 387517 R 668336 CDS YP_003255054.1 261867132 8536144 complement(388283..389095) 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsN 389095 8536144 D11S_0425 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsN YP_003255054.1 388283 R 668336 CDS YP_003255055.1 261867133 8536145 complement(389205..391445) 1 NC_013416.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 391445 8536145 D11S_0426 Aggregatibacter actinomycetemcomitans D11S-1 primosome assembly protein PriA YP_003255055.1 389205 R 668336 CDS YP_003255056.1 261867134 8536146 391630..392493 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 392493 8536146 D11S_0427 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255056.1 391630 D 668336 CDS YP_003255057.1 261867135 8536147 complement(392500..393504) 1 NC_013416.1 identified by Glimmer3; putative; capsular polysaccharide synthesis 393504 8536147 D11S_0428 Aggregatibacter actinomycetemcomitans D11S-1 capsular polysaccharide synthesis YP_003255057.1 392500 R 668336 CDS YP_003255058.1 261867136 8536148 complement(393513..394361) 1 NC_013416.1 identified by Glimmer3; putative; lipooligosaccharide biosynthesis protein lex-1 394361 8536148 D11S_0429 Aggregatibacter actinomycetemcomitans D11S-1 lipooligosaccharide biosynthesis protein lex-1 YP_003255058.1 393513 R 668336 CDS YP_003255059.1 261867137 8536149 394461..394586 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 394586 8536149 D11S_0430 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255059.1 394461 D 668336 CDS YP_003255060.1 261867138 8536150 394618..394830 1 NC_013416.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 394830 rpmE 8536150 rpmE Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L31 YP_003255060.1 394618 D 668336 CDS YP_003255061.1 261867139 8536151 394893..395585 1 NC_013416.1 identified by Glimmer3; putative; lipooligosaccharide galactosyltransferase I 395585 8536151 D11S_0432 Aggregatibacter actinomycetemcomitans D11S-1 lipooligosaccharide galactosyltransferase I YP_003255061.1 394893 D 668336 CDS YP_003255062.1 261867140 8536152 395586..396608 1 NC_013416.1 identified by Glimmer3; putative; putative heptosyltransferase II 396608 8536152 D11S_0433 Aggregatibacter actinomycetemcomitans D11S-1 putative heptosyltransferase II YP_003255062.1 395586 D 668336 CDS YP_003255063.1 261867141 8536153 396618..397670 1 NC_013416.1 identified by Glimmer3; putative; formamidopyrimidine-DNA glycosylase 397670 8536153 D11S_0434 Aggregatibacter actinomycetemcomitans D11S-1 formamidopyrimidine-DNA glycosylase YP_003255063.1 396618 D 668336 CDS YP_003255064.1 261867142 8536154 complement(397673..398530) 1 NC_013416.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 398530 8536154 D11S_0435 Aggregatibacter actinomycetemcomitans D11S-1 formamidopyrimidine-DNA glycosylase YP_003255064.1 397673 R 668336 CDS YP_003255065.1 261867143 8536155 complement(398570..398740) 1 NC_013416.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 398740 rpmG 8536155 rpmG Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L33 YP_003255065.1 398570 R 668336 CDS YP_003255066.1 261867144 8536156 complement(398752..398988) 1 NC_013416.1 required for 70S ribosome assembly; 50S ribosomal protein L28 398988 rpmB 8536156 rpmB Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L28 YP_003255066.1 398752 R 668336 CDS YP_003255067.1 261867145 8536157 complement(399197..399856) 1 NC_013416.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 399856 radC 8536157 radC Aggregatibacter actinomycetemcomitans D11S-1 DNA repair protein RadC YP_003255067.1 399197 R 668336 CDS YP_003255068.1 261867146 8536158 complement(399907..400059) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 400059 8536158 D11S_0439 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255068.1 399907 R 668336 CDS YP_003255069.1 261867147 8536159 400034..401233 1 NC_013416.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 401233 8536159 D11S_0440 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_003255069.1 400034 D 668336 CDS YP_003255070.1 261867148 8536160 401302..401757 1 NC_013416.1 identified by Glimmer3; putative; deoxyuridine 5'-triphosphate nucleotidohydrolase 401757 8536160 D11S_0441 Aggregatibacter actinomycetemcomitans D11S-1 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_003255070.1 401302 D 668336 CDS YP_003255071.1 261867149 8536161 401757..402356 1 NC_013416.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 402356 slmA 8536161 slmA Aggregatibacter actinomycetemcomitans D11S-1 nucleoid occlusion protein YP_003255071.1 401757 D 668336 CDS YP_003255072.1 261867150 8536162 402376..402594 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 402594 8536162 D11S_0443 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255072.1 402376 D 668336 CDS YP_003255073.1 261867151 8536163 402632..403276 1 NC_013416.1 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 403276 8536163 D11S_0444 Aggregatibacter actinomycetemcomitans D11S-1 cAMP-regulatory protein YP_003255073.1 402632 D 668336 CDS YP_003255074.1 261867152 8536164 complement(403409..404779) 1 NC_013416.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 404779 8536164 D11S_0445 Aggregatibacter actinomycetemcomitans D11S-1 glutathione reductase YP_003255074.1 403409 R 668336 CDS YP_003255075.1 261867153 8536165 complement(404874..405719) 1 NC_013416.1 identified by Glimmer3; putative; OrfJ 405719 8536165 D11S_0446 Aggregatibacter actinomycetemcomitans D11S-1 OrfJ YP_003255075.1 404874 R 668336 CDS YP_003255076.1 261867154 8536166 complement(405814..408381) 1 NC_013416.1 identified by Glimmer3; putative; penicillin-binding protein 1A 408381 8536166 D11S_0447 Aggregatibacter actinomycetemcomitans D11S-1 penicillin-binding protein 1A YP_003255076.1 405814 R 668336 CDS YP_003255077.1 261867155 8536167 408515..409324 1 NC_013416.1 identified by Glimmer3; putative; competence protein A 409324 8536167 D11S_0448 Aggregatibacter actinomycetemcomitans D11S-1 competence protein A YP_003255077.1 408515 D 668336 CDS YP_003255078.1 261867156 8536168 409335..409853 1 NC_013416.1 identified by Glimmer3; putative; ComB 409853 8536168 D11S_0449 Aggregatibacter actinomycetemcomitans D11S-1 ComB YP_003255078.1 409335 D 668336 CDS YP_003255079.1 261867157 8536169 409850..410374 1 NC_013416.1 identified by Glimmer3; putative; competence protein C 410374 8536169 D11S_0450 Aggregatibacter actinomycetemcomitans D11S-1 competence protein C YP_003255079.1 409850 D 668336 CDS YP_003255080.1 261867158 8536170 410374..410766 1 NC_013416.1 identified by Glimmer3; putative; ComD 410766 8536170 D11S_0451 Aggregatibacter actinomycetemcomitans D11S-1 ComD YP_003255080.1 410374 D 668336 CDS YP_003255081.1 261867159 8536171 410786..412195 1 NC_013416.1 identified by Glimmer3; putative; protein transport protein HofQ 412195 8536171 D11S_0452 Aggregatibacter actinomycetemcomitans D11S-1 protein transport protein HofQ YP_003255081.1 410786 D 668336 CDS YP_003255082.1 261867160 8536172 412409..412936 1 NC_013416.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 412936 aroK 8536172 aroK Aggregatibacter actinomycetemcomitans D11S-1 shikimate kinase YP_003255082.1 412409 D 668336 CDS YP_003255083.1 261867161 8536173 412960..414048 1 NC_013416.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 414048 aroB 8536173 aroB Aggregatibacter actinomycetemcomitans D11S-1 3-dehydroquinate synthase YP_003255083.1 412960 D 668336 CDS YP_003255084.1 261867162 8536174 414051..414905 1 NC_013416.1 identified by Glimmer3; putative; DNA adenine methylase 414905 8536174 D11S_0455 Aggregatibacter actinomycetemcomitans D11S-1 DNA adenine methylase YP_003255084.1 414051 D 668336 CDS YP_003255085.1 261867163 8536175 complement(415011..415490) 1 NC_013416.1 identified by Glimmer3; putative; single-stranded DNA-binding protein 415490 8536175 D11S_0456 Aggregatibacter actinomycetemcomitans D11S-1 single-stranded DNA-binding protein YP_003255085.1 415011 R 668336 CDS YP_003255086.1 261867164 8536176 415661..418492 1 NC_013416.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 418492 uvrA 8536176 uvrA Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ABC subunit A YP_003255086.1 415661 D 668336 CDS YP_003255087.1 261867165 8536177 complement(418561..419010) 1 NC_013416.1 identified by Glimmer3; putative; SoxR protein 419010 8536177 D11S_0458 Aggregatibacter actinomycetemcomitans D11S-1 SoxR protein YP_003255087.1 418561 R 668336 CDS YP_003255088.1 261867166 8536178 complement(419080..419391) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 419391 8536178 D11S_0459 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255088.1 419080 R 668336 CDS YP_003255089.1 261867167 8536179 419483..419800 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 419800 8536179 D11S_0460 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255089.1 419483 D 668336 CDS YP_003255090.1 261867168 8536180 419810..422572 1 NC_013416.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 422572 8536180 D11S_0461 Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecA YP_003255090.1 419810 D 668336 CDS YP_003255091.1 261867169 8536181 422649..423053 1 NC_013416.1 identified by Glimmer3; putative; translocase 423053 8536181 D11S_0462 Aggregatibacter actinomycetemcomitans D11S-1 translocase YP_003255091.1 422649 D 668336 CDS YP_003255092.1 261867170 8536182 complement(423545..424579) 1 NC_013416.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 424579 holA 8536182 holA Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit delta YP_003255092.1 423545 R 668336 CDS YP_003255093.1 261867171 8536183 complement(424579..425082) 1 NC_013416.1 identified by Glimmer3; putative; RlpB protein 425082 8536183 D11S_0464 Aggregatibacter actinomycetemcomitans D11S-1 RlpB protein YP_003255093.1 424579 R 668336 CDS YP_003255094.1 261867172 8536184 425071..425199 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 425199 8536184 D11S_0465 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255094.1 425071 D 668336 CDS YP_003255095.1 261867173 8536185 complement(425224..427812) 1 NC_013416.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 427812 leuS 8536185 leuS Aggregatibacter actinomycetemcomitans D11S-1 leucyl-tRNA synthetase YP_003255095.1 425224 R 668336 CDS YP_003255096.1 261867174 8536186 complement(427854..427979) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 427979 8536186 D11S_0467 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255096.1 427854 R 668336 CDS YP_003255097.1 261867175 8536187 complement(427933..428565) 1 NC_013416.1 identified by Glimmer3; putative; diadenosine tetraphosphatase 428565 8536187 D11S_0468 Aggregatibacter actinomycetemcomitans D11S-1 diadenosine tetraphosphatase YP_003255097.1 427933 R 668336 CDS YP_003255098.1 261867176 8536188 complement(428593..428886) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 428886 8536188 D11S_0469 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255098.1 428593 R 668336 CDS YP_003255099.1 261867177 8536189 complement(428870..429280) 1 NC_013416.1 identified by Glimmer3; putative; nucleotidyltransferase substrate-binding protein 429280 8536189 D11S_0470 Aggregatibacter actinomycetemcomitans D11S-1 nucleotidyltransferase substrate-binding protein YP_003255099.1 428870 R 668336 CDS YP_003255100.1 261867178 8536190 complement(429368..430195) 1 NC_013416.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 430195 apaH 8536190 apaH Aggregatibacter actinomycetemcomitans D11S-1 diadenosine tetraphosphatase YP_003255100.1 429368 R 668336 CDS YP_003255101.1 261867179 8536191 complement(430211..431074) 1 NC_013416.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 431074 ksgA 8536191 ksgA Aggregatibacter actinomycetemcomitans D11S-1 dimethyladenosine transferase YP_003255101.1 430211 R 668336 CDS YP_003255102.1 261867180 8536192 complement(431153..432085) 1 NC_013416.1 identified by Glimmer3; putative; SurA 432085 8536192 D11S_0473 Aggregatibacter actinomycetemcomitans D11S-1 SurA YP_003255102.1 431153 R 668336 CDS YP_003255103.1 261867181 8536193 complement(432152..432688) 1 NC_013416.1 regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase 432688 8536193 D11S_0474 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_003255103.1 432152 R 668336 CDS YP_003255104.1 261867182 8536194 complement(432827..433237) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 433237 8536194 D11S_0475 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255104.1 432827 R 668336 CDS YP_003255105.1 261867183 8536195 433350..433961 1 NC_013416.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 433961 8536195 D11S_0476 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255105.1 433350 D 668336 CDS YP_003255106.1 261867184 8536196 433985..435352 1 NC_013416.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 435352 8536196 D11S_0477 Aggregatibacter actinomycetemcomitans D11S-1 adenylosuccinate lyase YP_003255106.1 433985 D 668336 CDS YP_003255107.1 261867185 8536197 435468..435593 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 435593 8536197 D11S_0478 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255107.1 435468 D 668336 CDS YP_003255108.1 261867186 8536198 435574..436323 1 NC_013416.1 identified by Glimmer3; putative; short-chain dehydrogenase/reductase SDR 436323 8536198 D11S_0479 Aggregatibacter actinomycetemcomitans D11S-1 short-chain dehydrogenase/reductase SDR YP_003255108.1 435574 D 668336 CDS YP_003255109.1 261867187 8536199 complement(436437..436844) 1 NC_013416.1 identified by Glimmer3; putative; MerR family transcriptional regulator 436844 8536199 D11S_0480 Aggregatibacter actinomycetemcomitans D11S-1 MerR family transcriptional regulator YP_003255109.1 436437 R 668336 CDS YP_003255110.1 261867188 8536200 436983..438107 1 NC_013416.1 identified by Glimmer3; putative; alcohol dehydrogenase class III 438107 8536200 D11S_0481 Aggregatibacter actinomycetemcomitans D11S-1 alcohol dehydrogenase class III YP_003255110.1 436983 D 668336 CDS YP_003255111.1 261867189 8536201 438122..438952 1 NC_013416.1 identified by Glimmer3; putative; esterase 438952 8536201 D11S_0482 Aggregatibacter actinomycetemcomitans D11S-1 esterase YP_003255111.1 438122 D 668336 CDS YP_003255112.1 261867190 8536202 439189..439422 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 439422 8536202 D11S_0483 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255112.1 439189 D 668336 CDS YP_003255113.1 261867191 8536203 complement(439573..440952) 1 NC_013416.1 identified by Glimmer3; putative; signal recognition particle protein 440952 8536203 D11S_0484 Aggregatibacter actinomycetemcomitans D11S-1 signal recognition particle protein YP_003255113.1 439573 R 668336 CDS YP_003255114.1 261867192 8536204 441106..441900 1 NC_013416.1 identified by Glimmer3; putative; CcmC protein 441900 8536204 D11S_0485 Aggregatibacter actinomycetemcomitans D11S-1 CcmC protein YP_003255114.1 441106 D 668336 CDS YP_003255115.1 261867193 8536205 441975..443237 1 NC_013416.1 identified by Glimmer3; putative; hemolysin 443237 8536205 D11S_0486 Aggregatibacter actinomycetemcomitans D11S-1 hemolysin YP_003255115.1 441975 D 668336 CDS YP_003255116.1 261867194 8536206 443412..443882 1 NC_013416.1 identified by Glimmer3; putative; TonB-system energizer ExbB 443882 8536206 D11S_0487 Aggregatibacter actinomycetemcomitans D11S-1 TonB-system energizer ExbB YP_003255116.1 443412 D 668336 CDS YP_003255117.1 261867195 8536207 443886..444332 1 NC_013416.1 identified by Glimmer3; putative; TonB system transport protein ExbD 444332 8536207 D11S_0488 Aggregatibacter actinomycetemcomitans D11S-1 TonB system transport protein ExbD YP_003255117.1 443886 D 668336 CDS YP_003255118.1 261867196 8536208 444342..445046 1 NC_013416.1 identified by Glimmer3; putative; protein TonB 445046 8536208 D11S_0489 Aggregatibacter actinomycetemcomitans D11S-1 protein TonB YP_003255118.1 444342 D 668336 CDS YP_003255119.1 261867197 8536209 446221..446358 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 446358 8536209 D11S_0490 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255119.1 446221 D 668336 CDS YP_003255120.1 261867198 8536210 446815..446964 1 NC_013416.1 identified by Glimmer3; putative; fic-1 cell filamentation-like protein 446964 8536210 D11S_0491 Aggregatibacter actinomycetemcomitans D11S-1 fic-1 cell filamentation-like protein YP_003255120.1 446815 D 668336 CDS YP_003255121.1 261867199 8536211 447665..447805 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 447805 8536211 D11S_0492 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255121.1 447665 D 668336 CDS YP_003255122.1 261867200 8536212 447940..450360 1 NC_013416.1 identified by Glimmer3; putative; anaerobic dimethyl sulfoxide reductase chain A 450360 8536212 D11S_0493 Aggregatibacter actinomycetemcomitans D11S-1 anaerobic dimethyl sulfoxide reductase chain A YP_003255122.1 447940 D 668336 CDS YP_003255123.1 261867201 8536213 450371..450994 1 NC_013416.1 identified by Glimmer3; putative; anaerobic dimethyl sulfoxide reductase chain B 450994 8536213 D11S_0494 Aggregatibacter actinomycetemcomitans D11S-1 anaerobic dimethyl sulfoxide reductase chain B YP_003255123.1 450371 D 668336 CDS YP_003255124.1 261867202 8536214 450996..451835 1 NC_013416.1 identified by Glimmer3; putative; anaerobic dimethyl sulfoxide reductase chain C 451835 8536214 D11S_0495 Aggregatibacter actinomycetemcomitans D11S-1 anaerobic dimethyl sulfoxide reductase chain C YP_003255124.1 450996 D 668336 CDS YP_003255125.1 261867203 8536215 451883..452497 1 NC_013416.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; twin-argninine leader-binding protein DmsD 452497 8536215 D11S_0496 Aggregatibacter actinomycetemcomitans D11S-1 twin-argninine leader-binding protein DmsD YP_003255125.1 451883 D 668336 CDS YP_003255126.1 261867204 8536216 452511..452672 1 NC_013416.1 identified by Glimmer3; putative; ferredoxin 452672 8536216 D11S_0497 Aggregatibacter actinomycetemcomitans D11S-1 ferredoxin YP_003255126.1 452511 D 668336 CDS YP_003255127.1 261867205 8536217 452864..453769 1 NC_013416.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 453769 glyQ 8536217 glyQ Aggregatibacter actinomycetemcomitans D11S-1 glycyl-tRNA synthetase subunit alpha YP_003255127.1 452864 D 668336 CDS YP_003255128.1 261867206 8536218 453819..454079 1 NC_013416.1 identified by Glimmer3; putative; glycyl-tRNA synthetase subunit beta 454079 8536218 D11S_0499 Aggregatibacter actinomycetemcomitans D11S-1 glycyl-tRNA synthetase subunit beta YP_003255128.1 453819 D 668336 CDS YP_003255129.1 261867207 8536219 454246..454422 1 NC_013416.1 identified by Glimmer3; putative; DNA polymerase beta domain-containing protein region 454422 8536219 D11S_0500 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase beta domain-containing protein region YP_003255129.1 454246 D 668336 CDS YP_003255130.1 261867208 8536220 454627..455331 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 455331 8536220 D11S_0501 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255130.1 454627 D 668336 CDS YP_003255131.1 261867209 8536221 455413..457494 1 NC_013416.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 457494 glyS 8536221 glyS Aggregatibacter actinomycetemcomitans D11S-1 glycyl-tRNA synthetase subunit beta YP_003255131.1 455413 D 668336 CDS YP_003255132.1 261867210 8536222 complement(457706..458728) 1 NC_013416.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 458728 8536222 D11S_0503 Aggregatibacter actinomycetemcomitans D11S-1 delta-aminolevulinic acid dehydratase YP_003255132.1 457706 R 668336 CDS YP_003255133.1 261867211 8536223 complement(458747..459511) 1 NC_013416.1 identified by Glimmer3; putative; twin arginine-targeting protein translocase TatC 459511 8536223 D11S_0504 Aggregatibacter actinomycetemcomitans D11S-1 twin arginine-targeting protein translocase TatC YP_003255133.1 458747 R 668336 CDS YP_003255134.1 261867212 8536224 complement(459549..460211) 1 NC_013416.1 identified by Glimmer3; putative; sec-independent translocase 460211 8536224 D11S_0505 Aggregatibacter actinomycetemcomitans D11S-1 sec-independent translocase YP_003255134.1 459549 R 668336 CDS YP_003255135.1 261867213 8536225 complement(460215..460439) 1 NC_013416.1 identified by Glimmer3; putative; twin argininte translocase protein A 460439 8536225 D11S_0506 Aggregatibacter actinomycetemcomitans D11S-1 twin argininte translocase protein A YP_003255135.1 460215 R 668336 CDS YP_003255136.1 261867214 8536226 complement(460842..461714) 1 NC_013416.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 461714 hslO 8536226 hslO Aggregatibacter actinomycetemcomitans D11S-1 Hsp33-like chaperonin YP_003255136.1 460842 R 668336 CDS YP_003255137.1 261867215 8536227 complement(461782..462198) 1 NC_013416.1 identified by Glimmer3; putative; heat shock protein 15 462198 8536227 D11S_0508 Aggregatibacter actinomycetemcomitans D11S-1 heat shock protein 15 YP_003255137.1 461782 R 668336 CDS YP_003255138.1 261867216 8536228 complement(462211..462870) 1 NC_013416.1 identified by Glimmer3; putative; HAD-superfamily hydrolase 462870 8536228 D11S_0509 Aggregatibacter actinomycetemcomitans D11S-1 HAD-superfamily hydrolase YP_003255138.1 462211 R 668336 CDS YP_003255139.1 261867217 8536229 462909..463499 1 NC_013416.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 463499 nudE 8536229 nudE Aggregatibacter actinomycetemcomitans D11S-1 ADP-ribose diphosphatase NudE YP_003255139.1 462909 D 668336 CDS YP_003255140.1 261867218 8536230 complement(463504..464385) 1 NC_013416.1 identified by Glimmer3; putative; histidine kinase 464385 8536230 D11S_0511 Aggregatibacter actinomycetemcomitans D11S-1 histidine kinase YP_003255140.1 463504 R 668336 CDS YP_003255141.1 261867219 8536231 complement(464456..465082) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 465082 8536231 D11S_0512 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255141.1 464456 R 668336 CDS YP_003255142.1 261867220 8536232 465451..467457 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide transporter 467457 8536232 D11S_0513 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide transporter YP_003255142.1 465451 D 668336 CDS YP_003255143.1 261867221 8536233 467519..467947 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 467947 8536233 D11S_0514 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255143.1 467519 D 668336 CDS YP_003255144.1 261867222 8536234 467985..468794 1 NC_013416.1 identified by Glimmer3; putative; 3'(2'),5'-bisphosphate nucleotidase 468794 8536234 D11S_0515 Aggregatibacter actinomycetemcomitans D11S-1 3'(2'),5'-bisphosphate nucleotidase YP_003255144.1 467985 D 668336 CDS YP_003255145.1 261867223 8536235 468817..470376 1 NC_013416.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 470376 8536235 D11S_0516 Aggregatibacter actinomycetemcomitans D11S-1 glucose-6-phosphate 1-dehydrogenase YP_003255145.1 468817 D 668336 CDS YP_003255146.1 261867224 8536236 470629..471327 1 NC_013416.1 identified by Glimmer3; putative; diadenosine tetraphosphatase 471327 8536236 D11S_0517 Aggregatibacter actinomycetemcomitans D11S-1 diadenosine tetraphosphatase YP_003255146.1 470629 D 668336 CDS YP_003255147.1 261867225 8536237 471419..471538 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 471538 8536237 D11S_0518 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255147.1 471419 D 668336 CDS YP_003255148.1 261867226 8536238 471654..472082 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 472082 8536238 D11S_0519 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255148.1 471654 D 668336 CDS YP_003255149.1 261867227 8536239 472197..472889 1 NC_013416.1 identified by Glimmer3; putative; aspartate racemase 472889 8536239 D11S_0520 Aggregatibacter actinomycetemcomitans D11S-1 aspartate racemase YP_003255149.1 472197 D 668336 CDS YP_003255150.1 261867228 8536240 472902..473156 1 NC_013416.1 identified by Glimmer3; putative; glutaredoxin-like protein 473156 8536240 D11S_0521 Aggregatibacter actinomycetemcomitans D11S-1 glutaredoxin-like protein YP_003255150.1 472902 D 668336 CDS YP_003255151.1 261867229 8536241 473236..473694 1 NC_013416.1 identified by Glimmer3; putative; virulence-associated protein D 473694 8536241 D11S_0522 Aggregatibacter actinomycetemcomitans D11S-1 virulence-associated protein D YP_003255151.1 473236 D 668336 CDS YP_003255152.1 261867230 8536242 complement(474083..474229) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 474229 8536242 D11S_0523 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255152.1 474083 R 668336 CDS YP_003255153.1 261867231 8536243 474250..475704 1 NC_013416.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 475704 8536243 D11S_0524 Aggregatibacter actinomycetemcomitans D11S-1 6-phosphogluconate dehydrogenase YP_003255153.1 474250 D 668336 CDS YP_003255154.1 261867232 8536244 complement(476115..477359) 1 NC_013416.1 identified by Glimmer3; putative; beta-ketoacyl-ACP synthase IV 477359 8536244 D11S_0525 Aggregatibacter actinomycetemcomitans D11S-1 beta-ketoacyl-ACP synthase IV YP_003255154.1 476115 R 668336 CDS YP_003255155.1 261867233 8536245 complement(477379..478107) 1 NC_013416.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 478107 fabG 8536245 fabG Aggregatibacter actinomycetemcomitans D11S-1 3-ketoacyl-(acyl-carrier-protein) reductase YP_003255155.1 477379 R 668336 CDS YP_003255156.1 261867234 8536246 complement(478157..478600) 1 NC_013416.1 identified by Glimmer3; putative; thioester dehydrase family protein 478600 8536246 D11S_0527 Aggregatibacter actinomycetemcomitans D11S-1 thioester dehydrase family protein YP_003255156.1 478157 R 668336 CDS YP_003255157.1 261867235 8536247 complement(478593..479816) 1 NC_013416.1 identified by Glimmer3; putative; 3-oxoacyl-[acyl-carrier-protein] synthase 479816 8536247 D11S_0528 Aggregatibacter actinomycetemcomitans D11S-1 3-oxoacyl-[acyl-carrier-protein] synthase YP_003255157.1 478593 R 668336 CDS YP_003255158.1 261867236 8536248 complement(479825..480394) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 480394 8536248 D11S_0529 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255158.1 479825 R 668336 CDS YP_003255159.1 261867237 8536249 complement(480434..482707) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 482707 8536249 D11S_0530 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255159.1 480434 R 668336 CDS YP_003255160.1 261867238 8536250 complement(482714..483298) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane lipoprotein carrier protein LolA 483298 8536250 D11S_0531 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane lipoprotein carrier protein LolA YP_003255160.1 482714 R 668336 CDS YP_003255161.1 261867239 8536251 complement(483295..483741) 1 NC_013416.1 identified by Glimmer3; putative; thioesterase 483741 8536251 D11S_0532 Aggregatibacter actinomycetemcomitans D11S-1 thioesterase YP_003255161.1 483295 R 668336 CDS YP_003255162.1 261867240 8536252 complement(483738..484664) 1 NC_013416.1 identified by Glimmer3; putative; glycosyl transferase, family 2 484664 8536252 D11S_0533 Aggregatibacter actinomycetemcomitans D11S-1 glycosyl transferase, family 2 YP_003255162.1 483738 R 668336 CDS YP_003255163.1 261867241 8536253 complement(484661..485383) 1 NC_013416.1 identified by Glimmer3; putative; glycosyl transferase, group 2 family protein 485383 8536253 D11S_0534 Aggregatibacter actinomycetemcomitans D11S-1 glycosyl transferase, group 2 family protein YP_003255163.1 484661 R 668336 CDS YP_003255164.1 261867242 8536254 complement(485383..486744) 1 NC_013416.1 identified by Glimmer3; putative; AMP-binding enzyme family protein 486744 8536254 D11S_0535 Aggregatibacter actinomycetemcomitans D11S-1 AMP-binding enzyme family protein YP_003255164.1 485383 R 668336 CDS YP_003255165.1 261867243 8536255 complement(486741..487286) 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein 487286 8536255 D11S_0536 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein YP_003255165.1 486741 R 668336 CDS YP_003255166.1 261867244 8536256 complement(487312..488979) 1 NC_013416.1 identified by Glimmer3; putative; AMP-binding enzyme 488979 8536256 D11S_0537 Aggregatibacter actinomycetemcomitans D11S-1 AMP-binding enzyme YP_003255166.1 487312 R 668336 CDS YP_003255167.1 261867245 8536257 complement(488979..489230) 1 NC_013416.1 identified by Glimmer3; putative; acyl carrier protein 489230 8536257 D11S_0538 Aggregatibacter actinomycetemcomitans D11S-1 acyl carrier protein YP_003255167.1 488979 R 668336 CDS YP_003255168.1 261867246 8536258 complement(489233..489496) 1 NC_013416.1 identified by Glimmer3; putative; acyl carrier protein 489496 8536258 D11S_0539 Aggregatibacter actinomycetemcomitans D11S-1 acyl carrier protein YP_003255168.1 489233 R 668336 CDS YP_003255169.1 261867247 8536259 complement(489474..490262) 1 NC_013416.1 identified by Glimmer3; putative; 1-acyl-sn-glycerol-3-phosphate acyltransferase 490262 8536259 D11S_0540 Aggregatibacter actinomycetemcomitans D11S-1 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003255169.1 489474 R 668336 CDS YP_003255170.1 261867248 8536260 complement(490247..490990) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 490990 8536260 D11S_0541 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255170.1 490247 R 668336 CDS YP_003255171.1 261867249 8536261 complement(491020..491343) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 491343 8536261 D11S_0542 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255171.1 491020 R 668336 CDS YP_003255172.1 261867250 8536262 491371..491796 1 NC_013416.1 identified by Glimmer3; putative; excinuclease ATPase subunit 491796 8536262 D11S_0543 Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ATPase subunit YP_003255172.1 491371 D 668336 CDS YP_003255173.1 261867251 8536263 complement(491897..492610) 1 NC_013416.1 identified by Glimmer3; putative; HAD-superfamily hydrolase 492610 8536263 D11S_0544 Aggregatibacter actinomycetemcomitans D11S-1 HAD-superfamily hydrolase YP_003255173.1 491897 R 668336 CDS YP_003255174.1 261867252 8536264 complement(492624..493514) 1 NC_013416.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 493514 xerC 8536264 xerC Aggregatibacter actinomycetemcomitans D11S-1 site-specific tyrosine recombinase XerC YP_003255174.1 492624 R 668336 CDS YP_003255175.1 261867253 8536265 complement(493524..494348) 1 NC_013416.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 494348 dapF 8536265 dapF Aggregatibacter actinomycetemcomitans D11S-1 diaminopimelate epimerase YP_003255175.1 493524 R 668336 CDS YP_003255176.1 261867254 8536266 complement(494427..494606) 1 NC_013416.1 identified by Glimmer3; putative; phosphoribosylglycinamide formyltransferase 494606 8536266 D11S_0547 Aggregatibacter actinomycetemcomitans D11S-1 phosphoribosylglycinamide formyltransferase YP_003255176.1 494427 R 668336 CDS YP_003255177.1 261867255 8536267 complement(494606..495634) 1 NC_013416.1 identified by Glimmer3; putative; phosphoribosylformylglycinamidine cyclo-ligase 495634 8536267 D11S_0548 Aggregatibacter actinomycetemcomitans D11S-1 phosphoribosylformylglycinamidine cyclo-ligase YP_003255177.1 494606 R 668336 CDS YP_003255178.1 261867256 8536268 495817..496317 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 496317 8536268 D11S_0549 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255178.1 495817 D 668336 CDS YP_003255179.1 261867257 8536269 496290..496409 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 496409 8536269 D11S_0550 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255179.1 496290 D 668336 CDS YP_003255180.1 261867258 8536270 complement(496419..498989) 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent chaperone ClpB 498989 8536270 D11S_0551 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent chaperone ClpB YP_003255180.1 496419 R 668336 CDS YP_003255181.1 261867259 8536271 499254..499835 1 NC_013416.1 identified by Glimmer3; putative; competence protein comEA 499835 8536271 D11S_0552 Aggregatibacter actinomycetemcomitans D11S-1 competence protein comEA YP_003255181.1 499254 D 668336 CDS YP_003255182.1 261867260 8536272 complement(499908..501020) 1 NC_013416.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 501020 8536272 D11S_0553 Aggregatibacter actinomycetemcomitans D11S-1 aspartate-semialdehyde dehydrogenase YP_003255182.1 499908 R 668336 CDS YP_003255183.1 261867261 8536273 complement(501204..502016) 1 NC_013416.1 identified by Glimmer3; putative; Cof protein 502016 8536273 D11S_0554 Aggregatibacter actinomycetemcomitans D11S-1 Cof protein YP_003255183.1 501204 R 668336 CDS YP_003255184.1 261867262 8536274 502162..502848 1 NC_013416.1 identified by Glimmer3; putative; protein GntX 502848 8536274 D11S_0555 Aggregatibacter actinomycetemcomitans D11S-1 protein GntX YP_003255184.1 502162 D 668336 CDS YP_003255185.1 261867263 8536275 502965..503549 1 NC_013416.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; putative DNA uptake protein 503549 8536275 D11S_0556 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA uptake protein YP_003255185.1 502965 D 668336 CDS YP_003255186.1 261867264 8536276 complement(503736..503897) 1 NC_013416.1 identified by Glimmer3; putative; histidine biosynthesis bifunctional protein hisIE 503897 8536276 D11S_0557 Aggregatibacter actinomycetemcomitans D11S-1 histidine biosynthesis bifunctional protein hisIE YP_003255186.1 503736 R 668336 CDS YP_003255187.1 261867265 8536277 complement(504046..505461) 1 NC_013416.1 identified by Glimmer3; putative; branched-chain amino acid transport system II carrier protein 505461 8536277 D11S_0558 Aggregatibacter actinomycetemcomitans D11S-1 branched-chain amino acid transport system II carrier protein YP_003255187.1 504046 R 668336 CDS YP_003255188.1 261867266 8536278 505575..507209 1 NC_013416.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 507209 pyrG 8536278 pyrG Aggregatibacter actinomycetemcomitans D11S-1 CTP synthetase YP_003255188.1 505575 D 668336 CDS YP_004770517.1 342243405 11030737 508227..508598 1 NC_013416.1 ribosomal protein L14 508598 11030737 D11S_0559a Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein L14 YP_004770517.1 508227 D 668336 CDS YP_003255189.1 261867267 8536279 508609..508920 1 NC_013416.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 508920 rplX 8536279 rplX Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L24 YP_003255189.1 508609 D 668336 CDS YP_003255190.1 261867268 8536280 508938..509477 1 NC_013416.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 509477 rplE 8536280 rplE Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L5 YP_003255190.1 508938 D 668336 CDS YP_003864092.1 304653870 9715077 509490..509795 1 NC_013416.1 30S ribosomal protein S14 509795 9715077 D11S_0561a Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S14 YP_003864092.1 509490 D 668336 CDS YP_003255191.1 261867269 8536281 509832..510224 1 NC_013416.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 510224 rpsH 8536281 rpsH Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S8 YP_003255191.1 509832 D 668336 CDS YP_003255192.1 261867270 8536282 510240..510773 1 NC_013416.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 510773 rplF 8536282 rplF Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L6 YP_003255192.1 510240 D 668336 CDS YP_003255193.1 261867271 8536283 510835..511140 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L18 511140 8536283 D11S_0564 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L18 YP_003255193.1 510835 D 668336 CDS YP_003255194.1 261867272 8536284 511156..511656 1 NC_013416.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 511656 rpsE 8536284 rpsE Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S5 YP_003255194.1 511156 D 668336 CDS YP_003255195.1 261867273 8536285 511846..512280 1 NC_013416.1 late assembly protein; 50S ribosomal protein L15 512280 rplO 8536285 rplO Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L15 YP_003255195.1 511846 D 668336 CDS YP_003255196.1 261867274 8536286 512284..513609 1 NC_013416.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 513609 secY 8536286 secY Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecY YP_003255196.1 512284 D 668336 CDS YP_003255197.1 261867275 8536287 513635..513748 1 NC_013416.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 513748 rpmJ 8536287 rpmJ Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L36 YP_003255197.1 513635 D 668336 CDS YP_003255198.1 261867276 8536288 513890..514246 1 NC_013416.1 identified by Glimmer3; putative; ribosomal protein S13p/S18e 514246 8536288 D11S_0569 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein S13p/S18e YP_003255198.1 513890 D 668336 CDS YP_003255199.1 261867277 8536289 514262..514651 1 NC_013416.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 514651 8536289 D11S_0570 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S11 YP_003255199.1 514262 D 668336 CDS YP_003255200.1 261867278 8536290 514681..515301 1 NC_013416.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 515301 rpsD 8536290 rpsD Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S4 YP_003255200.1 514681 D 668336 CDS YP_003255201.1 261867279 8536291 515330..516319 1 NC_013416.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 516319 8536291 D11S_0572 Aggregatibacter actinomycetemcomitans D11S-1 DNA-directed RNA polymerase subunit alpha YP_003255201.1 515330 D 668336 CDS YP_003255202.1 261867280 8536292 516361..516750 1 NC_013416.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 516750 rplQ 8536292 rplQ Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L17 YP_003255202.1 516361 D 668336 CDS YP_003255203.1 261867281 8536293 complement(517759..518988) 1 NC_013416.1 identified by Glimmer3; putative; phosphoglycerate kinase 518988 8536293 D11S_0574 Aggregatibacter actinomycetemcomitans D11S-1 phosphoglycerate kinase YP_003255203.1 517759 R 668336 CDS YP_003255204.1 261867282 8536294 complement(519118..519801) 1 NC_013416.1 identified by Glimmer3; putative; murein transglycosylase C 519801 8536294 D11S_0575 Aggregatibacter actinomycetemcomitans D11S-1 murein transglycosylase C YP_003255204.1 519118 R 668336 CDS YP_003255205.1 261867283 8536295 complement(519817..521088) 1 NC_013416.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 521088 8536295 D11S_0576 Aggregatibacter actinomycetemcomitans D11S-1 nicotinamide-nucleotide adenylyltransferase YP_003255205.1 519817 R 668336 CDS YP_003255206.1 261867284 8536296 complement(521408..521653) 1 NC_013416.1 identified by Glimmer3; putative; sulfurtransferase TusA 521653 8536296 D11S_0577 Aggregatibacter actinomycetemcomitans D11S-1 sulfurtransferase TusA YP_003255206.1 521408 R 668336 CDS YP_003255207.1 261867285 8536297 521741..521896 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 521896 8536297 D11S_0578 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255207.1 521741 D 668336 CDS YP_003255208.1 261867286 8536298 521890..522012 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 522012 8536298 D11S_0579 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255208.1 521890 D 668336 CDS YP_003255209.1 261867287 8536299 522043..522258 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 522258 8536299 D11S_0580 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255209.1 522043 D 668336 CDS YP_003255210.1 261867288 8536300 522277..523740 1 NC_013416.1 identified by Glimmer3; putative; TrkG protein 523740 8536300 D11S_0581 Aggregatibacter actinomycetemcomitans D11S-1 TrkG protein YP_003255210.1 522277 D 668336 CDS YP_003255211.1 261867289 8536301 523740..524252 1 NC_013416.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 524252 hemG 8536301 hemG Aggregatibacter actinomycetemcomitans D11S-1 protoporphyrinogen oxidase YP_003255211.1 523740 D 668336 CDS YP_003255213.1 261867291 8536307 530170..530397 1 NC_013416.1 identified by Glimmer3; putative; drug/metabolite exporter family transporter 530397 8536307 D11S_0588 Aggregatibacter actinomycetemcomitans D11S-1 drug/metabolite exporter family transporter YP_003255213.1 530170 D 668336 CDS YP_003255214.1 261867292 8536308 530475..530720 1 NC_013416.1 identified by Glimmer3; putative; drug/metabolite exporter family transporter 530720 8536308 D11S_0589 Aggregatibacter actinomycetemcomitans D11S-1 drug/metabolite exporter family transporter YP_003255214.1 530475 D 668336 CDS YP_003255215.1 261867293 8536309 complement(531364..531504) 1 NC_013416.1 identified by Glimmer3; putative; putative transcriptional regulator 531504 8536309 D11S_0590 Aggregatibacter actinomycetemcomitans D11S-1 putative transcriptional regulator YP_003255215.1 531364 R 668336 CDS YP_003255216.1 261867294 8536310 531854..532027 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 532027 8536310 D11S_0591 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003255216.1 531854 D 668336 CDS YP_003255217.1 261867295 8536311 532315..532824 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 532824 8536311 D11S_0592 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003255217.1 532315 D 668336 CDS YP_003255218.1 261867296 8536312 532920..533504 1 NC_013416.1 identified by Glimmer3; putative; HAD hydrolase 533504 8536312 D11S_0593 Aggregatibacter actinomycetemcomitans D11S-1 HAD hydrolase YP_003255218.1 532920 D 668336 CDS YP_003255219.1 261867297 8536313 534046..534195 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 534195 8536313 D11S_0594 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255219.1 534046 D 668336 CDS YP_003255220.1 261867298 8536314 534242..534439 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 534439 8536314 D11S_0595 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255220.1 534242 D 668336 CDS YP_003255221.1 261867299 8536315 complement(534411..535448) 1 NC_013416.1 identified by Glimmer3; putative; ADP-heptose--lipooligosaccharide heptosyltransferase III 535448 8536315 D11S_0596 Aggregatibacter actinomycetemcomitans D11S-1 ADP-heptose--lipooligosaccharide heptosyltransferase III YP_003255221.1 534411 R 668336 CDS YP_003255222.1 261867300 8536316 complement(535630..537048) 1 NC_013416.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 537048 aspA 8536316 aspA Aggregatibacter actinomycetemcomitans D11S-1 aspartate ammonia-lyase YP_003255222.1 535630 R 668336 CDS YP_003255223.1 261867301 8536317 537278..537760 1 NC_013416.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; FxsA 537760 fxsA 8536317 fxsA Aggregatibacter actinomycetemcomitans D11S-1 FxsA YP_003255223.1 537278 D 668336 CDS YP_003255224.1 261867302 8536318 537847..538137 1 NC_013416.1 identified by Glimmer3; putative; chaperonin GroS 538137 8536318 D11S_0599 Aggregatibacter actinomycetemcomitans D11S-1 chaperonin GroS YP_003255224.1 537847 D 668336 CDS YP_003255225.1 261867303 8536319 538258..539901 1 NC_013416.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 539901 groEL 8536319 groEL Aggregatibacter actinomycetemcomitans D11S-1 chaperonin GroEL YP_003255225.1 538258 D 668336 CDS YP_003255226.1 261867304 8536320 complement(539990..540847) 1 NC_013416.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 540847 8536320 D11S_0601 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_003255226.1 539990 R 668336 CDS YP_003255227.1 261867305 8536323 complement(541264..542022) 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 542022 8536323 D11S_0604 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003255227.1 541264 R 668336 CDS YP_003255228.1 261867306 8536324 complement(542064..542237) 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 542237 8536324 D11S_0605 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003255228.1 542064 R 668336 CDS YP_003255229.1 261867307 8536325 complement(542305..542436) 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 542436 8536325 D11S_0606 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003255229.1 542305 R 668336 CDS YP_003255230.1 261867308 8536326 complement(542509..542865) 1 NC_013416.1 identified by Glimmer3; putative; diacylglycerol kinase 542865 8536326 D11S_0607 Aggregatibacter actinomycetemcomitans D11S-1 diacylglycerol kinase YP_003255230.1 542509 R 668336 CDS YP_003255231.1 261867309 8536327 complement(542890..545121) 1 NC_013416.1 identified by Glimmer3; putative; GTP pyrophosphokinase 545121 8536327 D11S_0608 Aggregatibacter actinomycetemcomitans D11S-1 GTP pyrophosphokinase YP_003255231.1 542890 R 668336 CDS YP_003255232.1 261867310 8536328 complement(545131..546447) 1 NC_013416.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 546447 rumA 8536328 rumA Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA 5-methyluridine methyltransferase YP_003255232.1 545131 R 668336 CDS YP_003255233.1 261867311 8536329 complement(546449..547135) 1 NC_013416.1 identified by Glimmer3; putative; DNA repair protein RecO 547135 8536329 D11S_0610 Aggregatibacter actinomycetemcomitans D11S-1 DNA repair protein RecO YP_003255233.1 546449 R 668336 CDS YP_003255234.1 261867312 8536330 complement(547432..548280) 1 NC_013416.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 548280 tsf 8536330 tsf Aggregatibacter actinomycetemcomitans D11S-1 elongation factor Ts YP_003255234.1 547432 R 668336 CDS YP_003255235.1 261867313 8536331 complement(548435..549157) 1 NC_013416.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 549157 rpsB 8536331 rpsB Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S2 YP_003255235.1 548435 R 668336 CDS YP_003255236.1 261867314 8536332 complement(549232..549621) 1 NC_013416.1 identified by Glimmer3; putative; RssA protein 549621 8536332 D11S_0613 Aggregatibacter actinomycetemcomitans D11S-1 RssA protein YP_003255236.1 549232 R 668336 CDS YP_003255237.1 261867315 8536333 complement(549740..550627) 1 NC_013416.1 identified by Glimmer3; putative; D-3-phosphoglycerate dehydrogenase 550627 8536333 D11S_0614 Aggregatibacter actinomycetemcomitans D11S-1 D-3-phosphoglycerate dehydrogenase YP_003255237.1 549740 R 668336 CDS YP_003255238.1 261867316 8536334 complement(550655..551518) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 551518 8536334 D11S_0615 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255238.1 550655 R 668336 CDS YP_003255239.1 261867317 8536335 551636..552352 1 NC_013416.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 552352 rph 8536335 rph Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease PH YP_003255239.1 551636 D 668336 CDS YP_003255240.1 261867318 8536336 552362..553006 1 NC_013416.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 553006 pyrE 8536336 pyrE Aggregatibacter actinomycetemcomitans D11S-1 orotate phosphoribosyltransferase YP_003255240.1 552362 D 668336 CDS YP_003255241.1 261867319 8536337 553088..553963 1 NC_013416.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 553963 djlA 8536337 djlA Aggregatibacter actinomycetemcomitans D11S-1 Dna-J like membrane chaperone protein YP_003255241.1 553088 D 668336 CDS YP_003255242.1 261867320 8536338 553967..554971 1 NC_013416.1 identified by Glimmer3; putative; tRNA-dihydrouridine synthase C 554971 8536338 D11S_0619 Aggregatibacter actinomycetemcomitans D11S-1 tRNA-dihydrouridine synthase C YP_003255242.1 553967 D 668336 CDS YP_003255243.1 261867321 8536339 complement(554957..556015) 1 NC_013416.1 identified by Glimmer3; putative; ferric cations import ATP-binding protein FbpC 556015 8536339 D11S_0620 Aggregatibacter actinomycetemcomitans D11S-1 ferric cations import ATP-binding protein FbpC YP_003255243.1 554957 R 668336 CDS YP_003255244.1 261867322 8536340 complement(556031..557551) 1 NC_013416.1 identified by Glimmer3; putative; iron(III)-transport system permease FbpB 2 557551 8536340 D11S_0621 Aggregatibacter actinomycetemcomitans D11S-1 iron(III)-transport system permease FbpB 2 YP_003255244.1 556031 R 668336 CDS YP_003255245.1 261867323 8536341 complement(557632..558630) 1 NC_013416.1 identified by Glimmer3; putative; ferric iron binding protein 558630 8536341 D11S_0622 Aggregatibacter actinomycetemcomitans D11S-1 ferric iron binding protein YP_003255245.1 557632 R 668336 CDS YP_003255246.1 261867324 8536342 complement(558849..559190) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 559190 8536342 D11S_0623 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255246.1 558849 R 668336 CDS YP_003255247.1 261867325 8536343 complement(559221..559988) 1 NC_013416.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 559988 trmB 8536343 trmB Aggregatibacter actinomycetemcomitans D11S-1 tRNA (guanine-N(7)-)-methyltransferase YP_003255247.1 559221 R 668336 CDS YP_003255248.1 261867326 8536344 560154..561344 1 NC_013416.1 identified by Glimmer3; putative; A/G-specific adenine glycosylase 561344 8536344 D11S_0625 Aggregatibacter actinomycetemcomitans D11S-1 A/G-specific adenine glycosylase YP_003255248.1 560154 D 668336 CDS YP_003255249.1 261867327 8536345 561322..561600 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 561600 8536345 D11S_0626 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255249.1 561322 D 668336 CDS YP_003255250.1 261867328 8536346 561603..562682 1 NC_013416.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 562682 mltC 8536346 mltC Aggregatibacter actinomycetemcomitans D11S-1 murein transglycosylase C YP_003255250.1 561603 D 668336 CDS YP_003255251.1 261867329 8536349 563077..563202 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 563202 8536349 D11S_0630 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255251.1 563077 D 668336 CDS YP_003255252.1 261867330 8536350 complement(563183..563776) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 563776 8536350 D11S_0631 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255252.1 563183 R 668336 CDS YP_003255253.1 261867331 8536351 563880..564191 1 NC_013416.1 identified by Glimmer3; putative; BolA protein 564191 8536351 D11S_0632 Aggregatibacter actinomycetemcomitans D11S-1 BolA protein YP_003255253.1 563880 D 668336 CDS YP_003255254.1 261867332 8536352 564220..564336 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 564336 8536352 D11S_0633 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255254.1 564220 D 668336 CDS YP_003255255.1 261867333 8536353 564355..564522 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 564522 8536353 D11S_0634 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255255.1 564355 D 668336 CDS YP_003255256.1 261867334 8536354 564547..565887 1 NC_013416.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit A 565887 8536354 D11S_0635 Aggregatibacter actinomycetemcomitans D11S-1 Na(+)-translocating NADH-quinone reductase subunit A YP_003255256.1 564547 D 668336 CDS YP_003255257.1 261867335 8536355 565890..567125 1 NC_013416.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit B 567125 8536355 D11S_0636 Aggregatibacter actinomycetemcomitans D11S-1 Na(+)-translocating NADH-quinone reductase subunit B YP_003255257.1 565890 D 668336 CDS YP_003255258.1 261867336 8536356 567118..567903 1 NC_013416.1 identified by Glimmer3; putative; NADH:ubiquinone oxidoreductase subunit C 567903 8536356 D11S_0637 Aggregatibacter actinomycetemcomitans D11S-1 NADH:ubiquinone oxidoreductase subunit C YP_003255258.1 567118 D 668336 CDS YP_003255259.1 261867337 8536357 567903..568532 1 NC_013416.1 identified by Glimmer3; putative; NADH:ubiquinone oxidoreductase subunit D 568532 8536357 D11S_0638 Aggregatibacter actinomycetemcomitans D11S-1 NADH:ubiquinone oxidoreductase subunit D YP_003255259.1 567903 D 668336 CDS YP_003255260.1 261867338 8536358 568536..569132 1 NC_013416.1 identified by Glimmer3; putative; NADH:ubiquinone oxidoreductase subunit E 569132 8536358 D11S_0639 Aggregatibacter actinomycetemcomitans D11S-1 NADH:ubiquinone oxidoreductase subunit E YP_003255260.1 568536 D 668336 CDS YP_003255261.1 261867339 8536359 569144..570379 1 NC_013416.1 uses the energy from reduction of ubiquinone-1 to ubiquinol to move Na(+) ions from the cytoplasm to the periplasm; Na(+)-translocating NADH-quinone reductase subunit F 570379 8536359 D11S_0640 Aggregatibacter actinomycetemcomitans D11S-1 Na(+)-translocating NADH-quinone reductase subunit F YP_003255261.1 569144 D 668336 CDS YP_003255262.1 261867340 8536360 570384..570533 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 570533 8536360 D11S_0641 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255262.1 570384 D 668336 CDS YP_003255263.1 261867341 8536361 570530..571618 1 NC_013416.1 identified by Glimmer3; putative; thiamine biosynthesis lipoprotein ApbE 571618 8536361 D11S_0642 Aggregatibacter actinomycetemcomitans D11S-1 thiamine biosynthesis lipoprotein ApbE YP_003255263.1 570530 D 668336 CDS YP_003255264.1 261867342 8536362 571697..571954 1 NC_013416.1 identified by Glimmer3; putative; Na(+)-translocating NADH-quinone reductase subunit E 571954 8536362 D11S_0643 Aggregatibacter actinomycetemcomitans D11S-1 Na(+)-translocating NADH-quinone reductase subunit E YP_003255264.1 571697 D 668336 CDS YP_003255265.1 261867343 8536363 572214..573365 1 NC_013416.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 573365 mnmA 8536363 mnmA Aggregatibacter actinomycetemcomitans D11S-1 tRNA-specific 2-thiouridylase MnmA YP_003255265.1 572214 D 668336 CDS YP_003255266.1 261867344 8536364 573818..573934 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 573934 8536364 D11S_0645 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255266.1 573818 D 668336 CDS YP_003255267.1 261867345 8536365 574003..575313 1 NC_013416.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 575313 eno 8536365 eno Aggregatibacter actinomycetemcomitans D11S-1 phosphopyruvate hydratase YP_003255267.1 574003 D 668336 CDS YP_003255268.1 261867346 8536366 complement(575409..575828) 1 NC_013416.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 575828 8536366 D11S_0647 Aggregatibacter actinomycetemcomitans D11S-1 Holliday junction resolvase-like protein YP_003255268.1 575409 R 668336 CDS YP_003255269.1 261867347 8536367 complement(575828..576385) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 576385 8536367 D11S_0648 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255269.1 575828 R 668336 CDS YP_003255270.1 261867348 8536368 complement(576402..577136) 1 NC_013416.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 577136 8536368 D11S_0649 Aggregatibacter actinomycetemcomitans D11S-1 16S ribosomal RNA methyltransferase RsmE YP_003255270.1 576402 R 668336 CDS YP_003255271.1 261867349 8536369 577135..577266 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 577266 8536369 D11S_0650 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255271.1 577135 D 668336 CDS YP_003255272.1 261867350 8536370 complement(577223..577540) 1 NC_013416.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 577540 8536370 D11S_0651 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional repressor protein MetJ YP_003255272.1 577223 R 668336 CDS YP_003255273.1 261867351 8536371 complement(577694..578581) 1 NC_013416.1 identified by Glimmer3; putative; UTP-glucose-1-phosphate uridylyltransferase 578581 8536371 D11S_0652 Aggregatibacter actinomycetemcomitans D11S-1 UTP-glucose-1-phosphate uridylyltransferase YP_003255273.1 577694 R 668336 CDS YP_003255274.1 261867352 8536372 complement(578657..580021) 1 NC_013416.1 identified by Glimmer3; putative; phosphomannomutase 580021 8536372 D11S_0653 Aggregatibacter actinomycetemcomitans D11S-1 phosphomannomutase YP_003255274.1 578657 R 668336 CDS YP_003255275.1 261867353 8536373 complement(580053..580235) 1 NC_013416.1 identified by Glimmer3; putative; carbon storage regulator 580235 8536373 D11S_0654 Aggregatibacter actinomycetemcomitans D11S-1 carbon storage regulator YP_003255275.1 580053 R 668336 CDS YP_003255276.1 261867354 8536374 complement(580358..582982) 1 NC_013416.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 582982 alaS 8536374 alaS Aggregatibacter actinomycetemcomitans D11S-1 alanyl-tRNA synthetase YP_003255276.1 580358 R 668336 CDS YP_003255277.1 261867355 8536375 complement(583182..583607) 1 NC_013416.1 identified by Glimmer3; putative; universal stress protein A 583607 8536375 D11S_0656 Aggregatibacter actinomycetemcomitans D11S-1 universal stress protein A YP_003255277.1 583182 R 668336 CDS YP_003255278.1 261867356 8536376 583726..584583 1 NC_013416.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 584583 mazG 8536376 mazG Aggregatibacter actinomycetemcomitans D11S-1 nucleoside triphosphate pyrophosphohydrolase YP_003255278.1 583726 D 668336 CDS YP_003255279.1 261867357 8536377 complement(584681..585670) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 585670 8536377 D11S_0658 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255279.1 584681 R 668336 CDS YP_003255280.1 261867358 8536378 complement(585929..587668) 1 NC_013416.1 identified by Glimmer3; putative; nucleoid-associated protein NdpA 587668 8536378 D11S_0659 Aggregatibacter actinomycetemcomitans D11S-1 nucleoid-associated protein NdpA YP_003255280.1 585929 R 668336 CDS YP_003255281.1 261867359 8536379 complement(587673..587897) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 587897 8536379 D11S_0660 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255281.1 587673 R 668336 CDS YP_003255282.1 261867360 8536380 588024..589049 1 NC_013416.1 identified by Glimmer3; putative; nucleoid-associated protein NdpA 589049 8536380 D11S_0661 Aggregatibacter actinomycetemcomitans D11S-1 nucleoid-associated protein NdpA YP_003255282.1 588024 D 668336 CDS YP_003255283.1 261867361 8536381 589115..589528 1 NC_013416.1 identified by Glimmer3; putative; SmpA protein 589528 8536381 D11S_0662 Aggregatibacter actinomycetemcomitans D11S-1 SmpA protein YP_003255283.1 589115 D 668336 CDS YP_003255284.1 261867362 8536382 589570..590265 1 NC_013416.1 identified by Glimmer3; putative; CpxR 590265 8536382 D11S_0663 Aggregatibacter actinomycetemcomitans D11S-1 CpxR YP_003255284.1 589570 D 668336 CDS YP_003255285.1 261867363 8536383 590310..591698 1 NC_013416.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 591698 cpxA 8536383 cpxA Aggregatibacter actinomycetemcomitans D11S-1 two-component sensor protein YP_003255285.1 590310 D 668336 CDS YP_003255286.1 261867364 8536384 complement(591754..592962) 1 NC_013416.1 identified by Glimmer3; putative; sodium/glutamate symporter 592962 8536384 D11S_0665 Aggregatibacter actinomycetemcomitans D11S-1 sodium/glutamate symporter YP_003255286.1 591754 R 668336 CDS YP_003255287.1 261867365 8536385 complement(593128..593562) 1 NC_013416.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 593562 8536385 D11S_0666 Aggregatibacter actinomycetemcomitans D11S-1 D-tyrosyl-tRNA(Tyr) deacylase YP_003255287.1 593128 R 668336 CDS YP_003255288.1 261867366 8536386 complement(593559..594389) 1 NC_013416.1 RNase BN; required for 3' maturation of certain phage T4-encoded tRNAs; forms a dimer; specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence; 3' to 5' exoribonuclease; ribonuclease BN 594389 rbn 8536386 rbn Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease BN YP_003255288.1 593559 R 668336 CDS YP_003255289.1 261867367 8536387 complement(594386..594859) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 594859 8536387 D11S_0668 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255289.1 594386 R 668336 CDS YP_003255290.1 261867368 8536388 complement(594862..595530) 1 NC_013416.1 identified by Glimmer3; putative; uridine phosphorylase 595530 8536388 D11S_0669 Aggregatibacter actinomycetemcomitans D11S-1 uridine phosphorylase YP_003255290.1 594862 R 668336 CDS YP_003255291.1 261867369 8536389 595656..597155 1 NC_013416.1 identified by Glimmer3; putative; ATP-binding protein 597155 8536389 D11S_0670 Aggregatibacter actinomycetemcomitans D11S-1 ATP-binding protein YP_003255291.1 595656 D 668336 CDS YP_003255292.1 261867370 8536390 597494..598309 1 NC_013416.1 identified by Glimmer3; putative; O-methyltransferase N-terminus family protein 598309 8536390 D11S_0671 Aggregatibacter actinomycetemcomitans D11S-1 O-methyltransferase N-terminus family protein YP_003255292.1 597494 D 668336 CDS YP_003255293.1 261867371 8536391 complement(598387..599280) 1 NC_013416.1 identified by Glimmer3; putative; LysR protein 599280 8536391 D11S_0672 Aggregatibacter actinomycetemcomitans D11S-1 LysR protein YP_003255293.1 598387 R 668336 CDS YP_003255294.1 261867372 8536392 599639..600484 1 NC_013416.1 identified by Glimmer3; putative; aldo/keto reductase 600484 8536392 D11S_0673 Aggregatibacter actinomycetemcomitans D11S-1 aldo/keto reductase YP_003255294.1 599639 D 668336 CDS YP_003255295.1 261867373 8536393 600548..601528 1 NC_013416.1 identified by Glimmer3; putative; aldo/keto reductase 601528 8536393 D11S_0674 Aggregatibacter actinomycetemcomitans D11S-1 aldo/keto reductase YP_003255295.1 600548 D 668336 CDS YP_003255296.1 261867374 8536394 601754..602809 1 NC_013416.1 identified by Glimmer3; putative; carboxylesterase type B 602809 8536394 D11S_0675 Aggregatibacter actinomycetemcomitans D11S-1 carboxylesterase type B YP_003255296.1 601754 D 668336 CDS YP_003255297.1 261867375 8536395 603077..603409 1 NC_013416.1 identified by Glimmer3; putative; carboxylesterase type B 603409 8536395 D11S_0676 Aggregatibacter actinomycetemcomitans D11S-1 carboxylesterase type B YP_003255297.1 603077 D 668336 CDS YP_003255298.1 261867376 8536396 603546..604655 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 604655 8536396 D11S_0677 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255298.1 603546 D 668336 CDS YP_003255299.1 261867377 8536397 complement(604794..605684) 1 NC_013416.1 identified by Glimmer3; putative; LysR protein 605684 8536397 D11S_0678 Aggregatibacter actinomycetemcomitans D11S-1 LysR protein YP_003255299.1 604794 R 668336 CDS YP_003255300.1 261867378 8536398 605754..605873 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 605873 8536398 D11S_0679 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255300.1 605754 D 668336 CDS YP_003255301.1 261867379 8536399 605886..606848 1 NC_013416.1 identified by Glimmer3; putative; peptidase S15 606848 8536399 D11S_0680 Aggregatibacter actinomycetemcomitans D11S-1 peptidase S15 YP_003255301.1 605886 D 668336 CDS YP_003255302.1 261867380 8536400 complement(607000..608832) 1 NC_013416.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 608832 8536400 D11S_0681 Aggregatibacter actinomycetemcomitans D11S-1 glucosamine--fructose-6-phosphate aminotransferase YP_003255302.1 607000 R 668336 CDS YP_003255303.1 261867381 8536401 complement(608887..609684) 1 NC_013416.1 identified by Glimmer3; putative; glucitol operon repressor 609684 8536401 D11S_0682 Aggregatibacter actinomycetemcomitans D11S-1 glucitol operon repressor YP_003255303.1 608887 R 668336 CDS YP_003255304.1 261867382 8536402 complement(609810..610082) 1 NC_013416.1 identified by Glimmer3; putative; DNA-binding protein HU 610082 8536402 D11S_0683 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding protein HU YP_003255304.1 609810 R 668336 CDS YP_003255305.1 261867383 8536403 complement(610249..610839) 1 NC_013416.1 identified by Glimmer3; putative; D-fructose-6-phosphate amidotransferase 610839 8536403 D11S_0684 Aggregatibacter actinomycetemcomitans D11S-1 D-fructose-6-phosphate amidotransferase YP_003255305.1 610249 R 668336 CDS YP_003255306.1 261867384 8536404 complement(610857..611921) 1 NC_013416.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 611921 hemE 8536404 hemE Aggregatibacter actinomycetemcomitans D11S-1 uroporphyrinogen decarboxylase YP_003255306.1 610857 R 668336 CDS YP_003255307.1 261867385 8536405 complement(611934..612809) 1 NC_013416.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 612809 nudC 8536405 nudC Aggregatibacter actinomycetemcomitans D11S-1 NADH pyrophosphatase YP_003255307.1 611934 R 668336 CDS YP_003255308.1 261867386 8536406 complement(612858..613502) 1 NC_013416.1 identified by Glimmer3; putative; putative outer membrane protein 613502 8536406 D11S_0687 Aggregatibacter actinomycetemcomitans D11S-1 putative outer membrane protein YP_003255308.1 612858 R 668336 CDS YP_003255309.1 261867387 8536407 complement(613499..613621) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 613621 8536407 D11S_0688 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255309.1 613499 R 668336 CDS YP_003255310.1 261867388 8536408 613760..615376 1 NC_013416.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 615376 8536408 D11S_0689 Aggregatibacter actinomycetemcomitans D11S-1 phosphoenolpyruvate carboxykinase YP_003255310.1 613760 D 668336 CDS YP_003255311.1 261867389 8536409 complement(615441..616988) 1 NC_013416.1 identified by Glimmer3; putative; exopolyphosphatase 616988 8536409 D11S_0690 Aggregatibacter actinomycetemcomitans D11S-1 exopolyphosphatase YP_003255311.1 615441 R 668336 CDS YP_003255312.1 261867390 8536410 complement(616991..620872) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 620872 8536410 D11S_0691 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255312.1 616991 R 668336 CDS YP_003255313.1 261867391 8536411 complement(620900..622759) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 622759 8536411 D11S_0692 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein YP_003255313.1 620900 R 668336 CDS YP_003255314.1 261867392 8536412 complement(622826..623455) 1 NC_013416.1 identified by Glimmer3; putative; nitrate/nitrite response regulator protein NarP 623455 8536412 D11S_0693 Aggregatibacter actinomycetemcomitans D11S-1 nitrate/nitrite response regulator protein NarP YP_003255314.1 622826 R 668336 CDS YP_003255315.1 261867393 8536413 complement(623465..625966) 1 NC_013416.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 625966 cyaA 8536413 cyaA Aggregatibacter actinomycetemcomitans D11S-1 adenylate cyclase YP_003255315.1 623465 R 668336 CDS YP_003255316.1 261867394 8536414 626122..627048 1 NC_013416.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 627048 hemC 8536414 hemC Aggregatibacter actinomycetemcomitans D11S-1 porphobilinogen deaminase YP_003255316.1 626122 D 668336 CDS YP_003255317.1 261867395 8536415 627061..627807 1 NC_013416.1 identified by Glimmer3; putative; uroporphyrinogen-III synthase 627807 8536415 D11S_0696 Aggregatibacter actinomycetemcomitans D11S-1 uroporphyrinogen-III synthase YP_003255317.1 627061 D 668336 CDS YP_003255318.1 261867396 8536416 627836..629221 1 NC_013416.1 identified by Glimmer3; putative; HemX protein 629221 8536416 D11S_0697 Aggregatibacter actinomycetemcomitans D11S-1 HemX protein YP_003255318.1 627836 D 668336 CDS YP_003255319.1 261867397 8536417 629234..630484 1 NC_013416.1 identified by Glimmer3; putative; HemY protein 630484 8536417 D11S_0698 Aggregatibacter actinomycetemcomitans D11S-1 HemY protein YP_003255319.1 629234 D 668336 CDS YP_003255320.1 261867398 8536418 complement(630551..631288) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 631288 8536418 D11S_0699 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255320.1 630551 R 668336 CDS YP_003255321.1 261867399 8536419 631550..631831 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 631831 8536419 D11S_0700 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255321.1 631550 D 668336 CDS YP_003255322.1 261867400 8536420 632017..632604 1 NC_013416.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 632604 8536420 D11S_0701 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase sigma factor YP_003255322.1 632017 D 668336 CDS YP_003255323.1 261867401 8536421 632619..632810 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 632810 8536421 D11S_0702 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255323.1 632619 D 668336 CDS YP_003255324.1 261867402 8536422 complement(632893..633375) 1 NC_013416.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 633375 greB 8536422 greB Aggregatibacter actinomycetemcomitans D11S-1 transcription elongation factor GreB YP_003255324.1 632893 R 668336 CDS YP_003255325.1 261867403 8536423 633586..633720 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 633720 8536423 D11S_0704 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255325.1 633586 D 668336 CDS YP_003255326.1 261867404 8536424 complement(634110..634709) 1 NC_013416.1 identified by Glimmer3; putative; phosphoglycerate mutase 634709 8536424 D11S_0705 Aggregatibacter actinomycetemcomitans D11S-1 phosphoglycerate mutase YP_003255326.1 634110 R 668336 CDS YP_003255327.1 261867405 8536425 complement(634721..635707) 1 NC_013416.1 identified by Glimmer3; putative; permease 635707 8536425 D11S_0706 Aggregatibacter actinomycetemcomitans D11S-1 permease YP_003255327.1 634721 R 668336 CDS YP_003255328.1 261867406 8536426 complement(635757..635891) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 635891 8536426 D11S_0707 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255328.1 635757 R 668336 CDS YP_003255329.1 261867407 8536427 complement(635905..636189) 1 NC_013416.1 identified by Glimmer3; putative; permease 636189 8536427 D11S_0708 Aggregatibacter actinomycetemcomitans D11S-1 permease YP_003255329.1 635905 R 668336 CDS YP_003255330.1 261867408 8536428 636299..637186 1 NC_013416.1 identified by Glimmer3; putative; LysR family transcriptional regulator 637186 8536428 D11S_0709 Aggregatibacter actinomycetemcomitans D11S-1 LysR family transcriptional regulator YP_003255330.1 636299 D 668336 CDS YP_003255331.1 261867409 8536429 637403..639718 1 NC_013416.1 identified by Glimmer3; putative; protein YhgF 639718 8536429 D11S_0710 Aggregatibacter actinomycetemcomitans D11S-1 protein YhgF YP_003255331.1 637403 D 668336 CDS YP_003255332.1 261867410 8536430 complement(639766..641223) 1 NC_013416.1 identified by Glimmer3; putative; XylB protein 641223 8536430 D11S_0711 Aggregatibacter actinomycetemcomitans D11S-1 XylB protein YP_003255332.1 639766 R 668336 CDS YP_003255333.1 261867411 8536431 complement(641229..642257) 1 NC_013416.1 identified by Glimmer3; putative; monosaccharide-transporting ATPase 642257 8536431 D11S_0712 Aggregatibacter actinomycetemcomitans D11S-1 monosaccharide-transporting ATPase YP_003255333.1 641229 R 668336 CDS YP_003255334.1 261867412 8536432 complement(642273..643760) 1 NC_013416.1 identified by Glimmer3; putative; MglA protein 643760 8536432 D11S_0713 Aggregatibacter actinomycetemcomitans D11S-1 MglA protein YP_003255334.1 642273 R 668336 CDS YP_003255335.1 261867413 8536433 643923..644675 1 NC_013416.1 identified by Glimmer3; putative; monosaccharide-transporting ATPase 644675 8536433 D11S_0714 Aggregatibacter actinomycetemcomitans D11S-1 monosaccharide-transporting ATPase YP_003255335.1 643923 D 668336 CDS YP_003255336.1 261867414 8536434 644659..644862 1 NC_013416.1 identified by Glimmer3; putative; monosaccharide-transporting ATPase 644862 8536434 D11S_0715 Aggregatibacter actinomycetemcomitans D11S-1 monosaccharide-transporting ATPase YP_003255336.1 644659 D 668336 CDS YP_003255337.1 261867415 8536435 complement(644932..645426) 1 NC_013416.1 identified by Glimmer3; putative; elongation factor Tu 645426 8536435 D11S_0716 Aggregatibacter actinomycetemcomitans D11S-1 elongation factor Tu YP_003255337.1 644932 R 668336 CDS YP_003255338.1 261867416 8536436 complement(645542..646114) 1 NC_013416.1 identified by Glimmer3; putative; elongation factor Tu 646114 8536436 D11S_0717 Aggregatibacter actinomycetemcomitans D11S-1 elongation factor Tu YP_003255338.1 645542 R 668336 CDS YP_003255339.1 261867417 8536441 646847..647761 1 NC_013416.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 647761 8536441 D11S_0722 Aggregatibacter actinomycetemcomitans D11S-1 pantothenate kinase YP_003255339.1 646847 D 668336 CDS YP_003255340.1 261867418 8536442 complement(647816..650236) 1 NC_013416.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 650236 gyrB 8536442 gyrB Aggregatibacter actinomycetemcomitans D11S-1 DNA gyrase subunit B YP_003255340.1 647816 R 668336 CDS YP_003255341.1 261867419 8536443 complement(650333..652222) 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent DNA helicase RecQ 652222 8536443 D11S_0724 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent DNA helicase RecQ YP_003255341.1 650333 R 668336 CDS YP_003255342.1 261867420 8536444 complement(652219..652533) 1 NC_013416.1 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 652533 cyaY 8536444 cyaY Aggregatibacter actinomycetemcomitans D11S-1 frataxin-like protein YP_003255342.1 652219 R 668336 CDS YP_003255343.1 261867421 8536445 652656..652775 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 652775 8536445 D11S_0726 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255343.1 652656 D 668336 CDS YP_003255344.1 261867422 8536446 652793..654043 1 NC_013416.1 identified by Glimmer3; putative; diaminopimelate decarboxylase 654043 8536446 D11S_0727 Aggregatibacter actinomycetemcomitans D11S-1 diaminopimelate decarboxylase YP_003255344.1 652793 D 668336 CDS YP_003255345.1 261867423 8536447 complement(654096..654701) 1 NC_013416.1 identified by Glimmer3; putative; inner membrane protein 654701 8536447 D11S_0728 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane protein YP_003255345.1 654096 R 668336 CDS YP_003255346.1 261867424 8536448 654900..655460 1 NC_013416.1 identified by Glimmer3; putative; dna-3-methyladenine glycosylase 1 655460 8536448 D11S_0729 Aggregatibacter actinomycetemcomitans D11S-1 dna-3-methyladenine glycosylase 1 YP_003255346.1 654900 D 668336 CDS YP_003255347.1 261867425 8536449 655526..657868 1 NC_013416.1 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 657868 8536449 D11S_0730 Aggregatibacter actinomycetemcomitans D11S-1 organic solvent tolerance protein YP_003255347.1 655526 D 668336 CDS YP_003255348.1 261867426 8536450 complement(657865..657987) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 657987 8536450 D11S_0731 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255348.1 657865 R 668336 CDS YP_003255349.1 261867427 8536451 complement(657957..658421) 1 NC_013416.1 identified by Glimmer3; putative; xanthine phosphoribosyltransferase 658421 8536451 D11S_0732 Aggregatibacter actinomycetemcomitans D11S-1 xanthine phosphoribosyltransferase YP_003255349.1 657957 R 668336 CDS YP_003255350.1 261867428 8536452 658536..659996 1 NC_013416.1 identified by Glimmer3; putative; aminoacyl-histidine dipeptidase 659996 8536452 D11S_0733 Aggregatibacter actinomycetemcomitans D11S-1 aminoacyl-histidine dipeptidase YP_003255350.1 658536 D 668336 CDS YP_003255351.1 261867429 8536453 complement(660076..660831) 1 NC_013416.1 identified by Glimmer3; putative; Short-chain dehydrogenase 660831 8536453 D11S_0734 Aggregatibacter actinomycetemcomitans D11S-1 Short-chain dehydrogenase YP_003255351.1 660076 R 668336 CDS YP_003255352.1 261867430 8536454 complement(660925..661437) 1 NC_013416.1 identified by Glimmer3; putative; MobB protein 661437 8536454 D11S_0735 Aggregatibacter actinomycetemcomitans D11S-1 MobB protein YP_003255352.1 660925 R 668336 CDS YP_003255353.1 261867431 8536455 complement(661518..661955) 1 NC_013416.1 identified by Glimmer3; putative; RseC protein 661955 8536455 D11S_0736 Aggregatibacter actinomycetemcomitans D11S-1 RseC protein YP_003255353.1 661518 R 668336 CDS YP_003255354.1 261867432 8536456 complement(661965..662921) 1 NC_013416.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 662921 rseB 8536456 rseB Aggregatibacter actinomycetemcomitans D11S-1 periplasmic negative regulator of sigmaE YP_003255354.1 661965 R 668336 CDS YP_003255355.1 261867433 8536457 complement(663004..663588) 1 NC_013416.1 identified by Glimmer3; putative; MclA 663588 8536457 D11S_0738 Aggregatibacter actinomycetemcomitans D11S-1 MclA YP_003255355.1 663004 R 668336 CDS YP_003255356.1 261867434 8536458 complement(663627..664202) 1 NC_013416.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 664202 8536458 D11S_0739 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase sigma factor RpoE YP_003255356.1 663627 R 668336 CDS YP_003255357.1 261867435 8536459 complement(664335..664589) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 664589 8536459 D11S_0740 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255357.1 664335 R 668336 CDS YP_003255358.1 261867436 8536460 complement(664629..664817) 1 NC_013416.1 identified by Glimmer3; putative; DMT superfamily drug/metabolite transporter 664817 8536460 D11S_0741 Aggregatibacter actinomycetemcomitans D11S-1 DMT superfamily drug/metabolite transporter YP_003255358.1 664629 R 668336 CDS YP_003255359.1 261867437 8536461 complement(664902..666617) 1 NC_013416.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 666617 8536461 D11S_0742 Aggregatibacter actinomycetemcomitans D11S-1 prolyl-tRNA synthetase YP_003255359.1 664902 R 668336 CDS YP_003255360.1 261867438 8536462 666761..668155 1 NC_013416.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 668155 8536462 D11S_0743 Aggregatibacter actinomycetemcomitans D11S-1 selenocysteine synthase YP_003255360.1 666761 D 668336 CDS YP_003255361.1 261867439 8536463 668152..670011 1 NC_013416.1 identified by Glimmer3; putative; selenocysteine-specific translation elongation factor 670011 8536463 D11S_0744 Aggregatibacter actinomycetemcomitans D11S-1 selenocysteine-specific translation elongation factor YP_003255361.1 668152 D 668336 CDS YP_003255362.1 261867440 8536464 670057..670959 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 670959 8536464 D11S_0745 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255362.1 670057 D 668336 CDS YP_003255363.1 261867441 8536465 complement(670998..671294) 1 NC_013416.1 identified by Glimmer3; putative; protein SapB 671294 8536465 D11S_0746 Aggregatibacter actinomycetemcomitans D11S-1 protein SapB YP_003255363.1 670998 R 668336 CDS YP_003255364.1 261867442 8536466 complement(671254..671448) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 671448 8536466 D11S_0747 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255364.1 671254 R 668336 CDS YP_003255365.1 261867443 8536467 complement(671450..671725) 1 NC_013416.1 identified by Glimmer3; putative; RNA pseudouridine synthase family protein 671725 8536467 D11S_0748 Aggregatibacter actinomycetemcomitans D11S-1 RNA pseudouridine synthase family protein YP_003255365.1 671450 R 668336 CDS YP_003255366.1 261867444 8536468 672131..673633 1 NC_013416.1 identified by Glimmer3; putative; sodium-dependent transporter 673633 8536468 D11S_0749 Aggregatibacter actinomycetemcomitans D11S-1 sodium-dependent transporter YP_003255366.1 672131 D 668336 CDS YP_003255367.1 261867445 8536469 674457..674573 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 674573 8536469 D11S_0750 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255367.1 674457 D 668336 CDS YP_003255368.1 261867446 8536470 674617..674853 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 674853 8536470 D11S_0751 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255368.1 674617 D 668336 CDS YP_003255369.1 261867447 8536472 complement(675831..677468) 1 NC_013416.1 identified by Glimmer3; putative; TadG 677468 8536472 D11S_0753 Aggregatibacter actinomycetemcomitans D11S-1 TadG YP_003255369.1 675831 R 668336 CDS YP_003255370.1 261867448 8536473 complement(677484..677801) 1 NC_013416.1 identified by Glimmer3; putative; TadF 677801 8536473 D11S_0754 Aggregatibacter actinomycetemcomitans D11S-1 TadF YP_003255370.1 677484 R 668336 CDS YP_003255371.1 261867449 8536474 complement(678721..679482) 1 NC_013416.1 identified by Glimmer3; putative; TadD 679482 8536474 D11S_0755 Aggregatibacter actinomycetemcomitans D11S-1 TadD YP_003255371.1 678721 R 668336 CDS YP_003255372.1 261867450 8536475 complement(679472..680338) 1 NC_013416.1 identified by Glimmer3; putative; TadC 680338 8536475 D11S_0756 Aggregatibacter actinomycetemcomitans D11S-1 TadC YP_003255372.1 679472 R 668336 CDS YP_003255373.1 261867451 8536476 complement(680335..681222) 1 NC_013416.1 identified by Glimmer3; putative; TadB 681222 8536476 D11S_0757 Aggregatibacter actinomycetemcomitans D11S-1 TadB YP_003255373.1 680335 R 668336 CDS YP_003255374.1 261867452 8536477 complement(681222..682502) 1 NC_013416.1 identified by Glimmer3; putative; TadA 682502 8536477 D11S_0758 Aggregatibacter actinomycetemcomitans D11S-1 TadA YP_003255374.1 681222 R 668336 CDS YP_003255375.1 261867453 8536478 complement(682516..683640) 1 NC_013416.1 identified by Glimmer3; putative; TadZ 683640 8536478 D11S_0759 Aggregatibacter actinomycetemcomitans D11S-1 TadZ YP_003255375.1 682516 R 668336 CDS YP_003255376.1 261867454 8536479 complement(683656..684159) 1 NC_013416.1 identified by Glimmer3; putative; RcpB 684159 8536479 D11S_0760 Aggregatibacter actinomycetemcomitans D11S-1 RcpB YP_003255376.1 683656 R 668336 CDS YP_003255377.1 261867455 8536480 complement(684156..685418) 1 NC_013416.1 identified by Glimmer3; putative; RcpA 685418 8536480 D11S_0761 Aggregatibacter actinomycetemcomitans D11S-1 RcpA YP_003255377.1 684156 R 668336 CDS YP_003255378.1 261867456 8536481 complement(685540..686364) 1 NC_013416.1 identified by Glimmer3; putative; RcpC 686364 8536481 D11S_0762 Aggregatibacter actinomycetemcomitans D11S-1 RcpC YP_003255378.1 685540 R 668336 CDS YP_003255379.1 261867457 8536482 complement(686415..686843) 1 NC_013416.1 identified by Glimmer3; putative; TadV 686843 8536482 D11S_0763 Aggregatibacter actinomycetemcomitans D11S-1 TadV YP_003255379.1 686415 R 668336 CDS YP_003255380.1 261867458 8536483 complement(687184..687414) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 687414 8536483 D11S_0764 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255380.1 687184 R 668336 CDS YP_003255381.1 261867459 8536484 687380..687493 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 687493 8536484 D11S_0765 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255381.1 687380 D 668336 CDS YP_003255382.1 261867460 8536485 687981..688445 1 NC_013416.1 identified by Glimmer3; putative; putative metalloprotease 688445 8536485 D11S_0766 Aggregatibacter actinomycetemcomitans D11S-1 putative metalloprotease YP_003255382.1 687981 D 668336 CDS YP_003255383.1 261867461 8536486 688607..689305 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 689305 8536486 D11S_0767 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003255383.1 688607 D 668336 CDS YP_003255384.1 261867462 8536487 689309..691231 1 NC_013416.1 identified by Glimmer3; putative; acetyltransferase 691231 8536487 D11S_0768 Aggregatibacter actinomycetemcomitans D11S-1 acetyltransferase YP_003255384.1 689309 D 668336 CDS YP_003255385.1 261867463 8536488 691272..691445 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 691445 8536488 D11S_0769 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255385.1 691272 D 668336 CDS YP_003255386.1 261867464 8536489 691510..695031 1 NC_013416.1 identified by Glimmer3; putative; transcription-repair coupling factor 695031 8536489 D11S_0770 Aggregatibacter actinomycetemcomitans D11S-1 transcription-repair coupling factor YP_003255386.1 691510 D 668336 CDS YP_003255387.1 261867465 8536490 695133..695717 1 NC_013416.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 695717 gmhA 8536490 gmhA Aggregatibacter actinomycetemcomitans D11S-1 phosphoheptose isomerase YP_003255387.1 695133 D 668336 CDS YP_003255388.1 261867466 8536491 695858..696592 1 NC_013416.1 With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 696592 artP 8536491 artP Aggregatibacter actinomycetemcomitans D11S-1 arginine transporter ATP-binding subunit YP_003255388.1 695858 D 668336 CDS YP_003255389.1 261867467 8536492 696613..697332 1 NC_013416.1 identified by Glimmer3; putative; arginine-binding periplasmic protein 1 697332 8536492 D11S_0773 Aggregatibacter actinomycetemcomitans D11S-1 arginine-binding periplasmic protein 1 YP_003255389.1 696613 D 668336 CDS YP_003255390.1 261867468 8536493 697337..697999 1 NC_013416.1 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 697999 8536493 D11S_0774 Aggregatibacter actinomycetemcomitans D11S-1 arginine transporter permease subunit ArtQ YP_003255390.1 697337 D 668336 CDS YP_003255391.1 261867469 8536494 698002..698685 1 NC_013416.1 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 698685 artM 8536494 artM Aggregatibacter actinomycetemcomitans D11S-1 arginine transporter permease subunit ArtM YP_003255391.1 698002 D 668336 CDS YP_003255392.1 261867470 8536495 699227..700825 1 NC_013416.1 identified by Glimmer3; putative; transaldolase B 700825 8536495 D11S_0776 Aggregatibacter actinomycetemcomitans D11S-1 transaldolase B YP_003255392.1 699227 D 668336 CDS YP_003255393.1 261867471 8536496 701089..701547 1 NC_013416.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 701547 8536496 D11S_0777 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein MraZ YP_003255393.1 701089 D 668336 CDS YP_003255394.1 261867472 8536497 701657..702625 1 NC_013416.1 identified by Glimmer3; putative; S-adenosyl-methyltransferase MraW 702625 mraW 8536497 mraW Aggregatibacter actinomycetemcomitans D11S-1 S-adenosyl-methyltransferase MraW YP_003255394.1 701657 D 668336 CDS YP_003255395.1 261867473 8536498 702625..702942 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsL 702942 8536498 D11S_0779 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsL YP_003255395.1 702625 D 668336 CDS YP_003255396.1 261867474 8536499 702960..704783 1 NC_013416.1 identified by Glimmer3; putative; peptidoglycan synthetase FtsI 704783 8536499 D11S_0780 Aggregatibacter actinomycetemcomitans D11S-1 peptidoglycan synthetase FtsI YP_003255396.1 702960 D 668336 CDS YP_003255397.1 261867475 8536500 704801..706267 1 NC_013416.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 706267 murE 8536500 murE Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003255397.1 704801 D 668336 CDS YP_003255398.1 261867476 8536501 706274..707653 1 NC_013416.1 identified by Glimmer3; putative; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 707653 8536501 D11S_0782 Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_003255398.1 706274 D 668336 CDS YP_003255399.1 261867477 8536502 707647..708732 1 NC_013416.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 708732 mraY 8536502 mraY Aggregatibacter actinomycetemcomitans D11S-1 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003255399.1 707647 D 668336 CDS YP_003255400.1 261867478 8536503 708759..710063 1 NC_013416.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 710063 murD 8536503 murD Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_003255400.1 708759 D 668336 CDS YP_003255401.1 261867479 8536504 710078..711268 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsW 711268 8536504 D11S_0785 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsW YP_003255401.1 710078 D 668336 CDS YP_003255402.1 261867480 8536505 711309..712373 1 NC_013416.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 712373 murG 8536505 murG Aggregatibacter actinomycetemcomitans D11S-1 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_003255402.1 711309 D 668336 CDS YP_003255403.1 261867481 8536506 712444..713874 1 NC_013416.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 713874 murC 8536506 murC Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylmuramate--L-alanine ligase YP_003255403.1 712444 D 668336 CDS YP_003255404.1 261867482 8536507 713887..714816 1 NC_013416.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 714816 ddl 8536507 ddl Aggregatibacter actinomycetemcomitans D11S-1 D-alanine--D-alanine ligase YP_003255404.1 713887 D 668336 CDS YP_003255405.1 261867483 8536508 714813..715580 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsQ 715580 8536508 D11S_0789 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsQ YP_003255405.1 714813 D 668336 CDS YP_003255406.1 261867484 8536509 715605..716885 1 NC_013416.1 identified by Glimmer3; putative; cell division protein FtsA 716885 8536509 D11S_0790 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsA YP_003255406.1 715605 D 668336 CDS YP_003255407.1 261867485 8536510 716969..718252 1 NC_013416.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 718252 8536510 D11S_0791 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein FtsZ YP_003255407.1 716969 D 668336 CDS YP_003255408.1 261867486 8536511 718290..719207 1 NC_013416.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 719207 lpxC 8536511 lpxC Aggregatibacter actinomycetemcomitans D11S-1 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_003255408.1 718290 D 668336 CDS YP_003255409.1 261867487 8536512 719405..720139 1 NC_013416.1 identified by Glimmer3; putative; P-protein 720139 8536512 D11S_0793 Aggregatibacter actinomycetemcomitans D11S-1 P-protein YP_003255409.1 719405 D 668336 CDS YP_003255410.1 261867488 8536513 720114..720566 1 NC_013416.1 identified by Glimmer3; putative; P-protein 720566 8536513 D11S_0794 Aggregatibacter actinomycetemcomitans D11S-1 P-protein YP_003255410.1 720114 D 668336 CDS YP_003255411.1 261867489 8536514 720700..722580 1 NC_013416.1 molecular chaperone; heat shock protein 90 722580 8536514 D11S_0795 Aggregatibacter actinomycetemcomitans D11S-1 heat shock protein 90 YP_003255411.1 720700 D 668336 CDS YP_003255412.1 261867490 8536515 722646..722990 1 NC_013416.1 identified by Glimmer3; putative; succinyl-diaminopimelate desuccinylase 722990 8536515 D11S_0796 Aggregatibacter actinomycetemcomitans D11S-1 succinyl-diaminopimelate desuccinylase YP_003255412.1 722646 D 668336 CDS YP_003255413.1 261867491 8536516 723127..724260 1 NC_013416.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 724260 8536516 D11S_0797 Aggregatibacter actinomycetemcomitans D11S-1 succinyl-diaminopimelate desuccinylase YP_003255413.1 723127 D 668336 CDS YP_003255414.1 261867492 8536517 724262..724942 1 NC_013416.1 identified by Glimmer3; putative; bifunctional aspartokinase I/homoserine dehydrogenase I 724942 8536517 D11S_0798 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional aspartokinase I/homoserine dehydrogenase I YP_003255414.1 724262 D 668336 CDS YP_003255415.1 261867493 8536518 725188..725811 1 NC_013416.1 identified by Glimmer3; putative; adp-ribose pyrophosphatase 725811 8536518 D11S_0799 Aggregatibacter actinomycetemcomitans D11S-1 adp-ribose pyrophosphatase YP_003255415.1 725188 D 668336 CDS YP_003255416.1 261867494 8536519 725862..726686 1 NC_013416.1 identified by Glimmer3; putative; cyclic 3',5'-adenosine monophosphate phosphodiesterase 726686 8536519 D11S_0800 Aggregatibacter actinomycetemcomitans D11S-1 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_003255416.1 725862 D 668336 CDS YP_003255417.1 261867495 8536520 726783..726962 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 726962 8536520 D11S_0801 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255417.1 726783 D 668336 CDS YP_003255418.1 261867496 8536521 complement(727194..728018) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 728018 8536521 D11S_0802 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255418.1 727194 R 668336 CDS YP_003255419.1 261867497 8536522 complement(727991..728455) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 728455 8536522 D11S_0803 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255419.1 727991 R 668336 CDS YP_003255420.1 261867498 8536523 728639..728776 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 728776 8536523 D11S_0804 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255420.1 728639 D 668336 CDS YP_003255421.1 261867499 8536524 728810..729514 1 NC_013416.1 identified by Glimmer3; putative; ExsB protein 729514 8536524 D11S_0805 Aggregatibacter actinomycetemcomitans D11S-1 ExsB protein YP_003255421.1 728810 D 668336 CDS YP_003255422.1 261867500 8536525 729632..730846 1 NC_013416.1 identified by Glimmer3; putative; putative AAA+ superfamily ATPase 730846 8536525 D11S_0806 Aggregatibacter actinomycetemcomitans D11S-1 putative AAA+ superfamily ATPase YP_003255422.1 729632 D 668336 CDS YP_003255423.1 261867501 8536526 complement(730925..731953) 1 NC_013416.1 identified by Glimmer3; putative; alcohol dehydrogenase (adh-ht) protein 731953 8536526 D11S_0807 Aggregatibacter actinomycetemcomitans D11S-1 alcohol dehydrogenase (adh-ht) protein YP_003255423.1 730925 R 668336 CDS YP_003255424.1 261867502 8536527 732224..734371 1 NC_013416.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 734371 rlmL 8536527 rlmL Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA m(2)G2445 methyltransferase YP_003255424.1 732224 D 668336 CDS YP_003255425.1 261867503 8536528 complement(734468..734812) 1 NC_013416.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 734812 8536528 D11S_0809 Aggregatibacter actinomycetemcomitans D11S-1 fumarate reductase subunit D YP_003255425.1 734468 R 668336 CDS YP_003255426.1 261867504 8536529 complement(734822..735214) 1 NC_013416.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 735214 8536529 D11S_0810 Aggregatibacter actinomycetemcomitans D11S-1 fumarate reductase subunit C YP_003255426.1 734822 R 668336 CDS YP_003255427.1 261867505 8536530 complement(735226..735996) 1 NC_013416.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 735996 8536530 D11S_0811 Aggregatibacter actinomycetemcomitans D11S-1 fumarate reductase iron-sulfur subunit YP_003255427.1 735226 R 668336 CDS YP_003255428.1 261867506 8536531 complement(736001..737809) 1 NC_013416.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 737809 8536531 D11S_0812 Aggregatibacter actinomycetemcomitans D11S-1 fumarate reductase flavoprotein subunit YP_003255428.1 736001 R 668336 CDS YP_003255429.1 261867507 8536532 complement(737865..738053) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 738053 8536532 D11S_0813 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255429.1 737865 R 668336 CDS YP_003255430.1 261867508 8536533 738117..739088 1 NC_013416.1 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 739088 8536533 D11S_0814 Aggregatibacter actinomycetemcomitans D11S-1 lysyl-tRNA synthetase YP_003255430.1 738117 D 668336 CDS YP_003255431.1 261867509 8536534 complement(739154..739921) 1 NC_013416.1 Part of the FecBCDE citrate-dependent iron (III) transport system; iron-dicitrate transporter ATP-binding subunit 739921 fecE 8536534 fecE Aggregatibacter actinomycetemcomitans D11S-1 iron-dicitrate transporter ATP-binding subunit YP_003255431.1 739154 R 668336 CDS YP_003255432.1 261867510 8536535 complement(739921..740904) 1 NC_013416.1 Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter), as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter.; iron-dicitrate transporter subunit FecD 740904 fecD 8536535 fecD Aggregatibacter actinomycetemcomitans D11S-1 iron-dicitrate transporter subunit FecD YP_003255432.1 739921 R 668336 CDS YP_003255433.1 261867511 8536536 complement(740904..741893) 1 NC_013416.1 part of the FecBCDE citrate-dependent iron (III) transport system; iron-dicitrate transporter permease subunit 741893 fecC 8536536 fecC Aggregatibacter actinomycetemcomitans D11S-1 iron-dicitrate transporter permease subunit YP_003255433.1 740904 R 668336 CDS YP_003255434.1 261867512 8536537 complement(741893..742786) 1 NC_013416.1 part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); iron-dicitrate transporter substrate-binding subunit 742786 fecB 8536537 fecB Aggregatibacter actinomycetemcomitans D11S-1 iron-dicitrate transporter substrate-binding subunit YP_003255434.1 741893 R 668336 CDS YP_003255435.1 261867513 8536538 complement(742856..743926) 1 NC_013416.1 identified by Glimmer3; putative; metallophosphoesterase 743926 8536538 D11S_0819 Aggregatibacter actinomycetemcomitans D11S-1 metallophosphoesterase YP_003255435.1 742856 R 668336 CDS YP_003255436.1 261867514 8536539 743997..744440 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 744440 8536539 D11S_0820 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255436.1 743997 D 668336 CDS YP_003255437.1 261867515 8536540 744525..745127 1 NC_013416.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 745127 recR 8536540 recR Aggregatibacter actinomycetemcomitans D11S-1 recombination protein RecR YP_003255437.1 744525 D 668336 CDS YP_003255438.1 261867516 8536541 745159..747096 1 NC_013416.1 decatenates replicating daughter chromosomes; DNA topoisomerase III 747096 8536541 D11S_0822 Aggregatibacter actinomycetemcomitans D11S-1 DNA topoisomerase III YP_003255438.1 745159 D 668336 CDS YP_003255439.1 261867517 8536542 747110..747241 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 747241 8536542 D11S_0823 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255439.1 747110 D 668336 CDS YP_003255440.1 261867518 8536543 747269..747607 1 NC_013416.1 identified by Glimmer3; putative; preprotein translocase subunit SecG 747607 secG 8536543 secG Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecG YP_003255440.1 747269 D 668336 CDS YP_003255441.1 261867519 8536545 748083..748670 1 NC_013416.1 identified by Glimmer3; putative; integrase 748670 8536545 D11S_0826 Aggregatibacter actinomycetemcomitans D11S-1 integrase YP_003255441.1 748083 D 668336 CDS YP_003255442.1 261867520 8536546 748639..748944 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 748944 8536546 D11S_0827 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255442.1 748639 D 668336 CDS YP_003255443.1 261867521 8536547 749525..749779 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 749779 8536547 D11S_0828 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255443.1 749525 D 668336 CDS YP_003255444.1 261867522 8536548 complement(750035..750808) 1 NC_013416.1 identified by Glimmer3; putative; monofunctional biosynthetic peptidoglycan transglycosylase 750808 8536548 D11S_0829 Aggregatibacter actinomycetemcomitans D11S-1 monofunctional biosynthetic peptidoglycan transglycosylase YP_003255444.1 750035 R 668336 CDS YP_003255445.1 261867523 8536549 complement(750786..751094) 1 NC_013416.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 751094 8536549 D11S_0830 Aggregatibacter actinomycetemcomitans D11S-1 Trp operon repressor YP_003255445.1 750786 R 668336 CDS YP_003255446.1 261867524 8536550 complement(751127..753343) 1 NC_013416.1 identified by Glimmer3; putative; intracellular septation protein A 753343 8536550 D11S_0831 Aggregatibacter actinomycetemcomitans D11S-1 intracellular septation protein A YP_003255446.1 751127 R 668336 CDS YP_003255447.1 261867525 8536551 complement(753549..753845) 1 NC_013416.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; YciI-like protein 753845 8536551 D11S_0832 Aggregatibacter actinomycetemcomitans D11S-1 YciI-like protein YP_003255447.1 753549 R 668336 CDS YP_003255448.1 261867526 8536552 complement(753848..754318) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 754318 8536552 D11S_0833 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255448.1 753848 R 668336 CDS YP_003255449.1 261867527 8536553 complement(754322..754873) 1 NC_013416.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 754873 8536553 D11S_0834 Aggregatibacter actinomycetemcomitans D11S-1 intracellular septation protein A YP_003255449.1 754322 R 668336 CDS YP_003255450.1 261867528 8536554 complement(754879..755637) 1 NC_013416.1 identified by Glimmer3; putative; beta-methylgalactoside transporter inner membrane component 755637 8536554 D11S_0835 Aggregatibacter actinomycetemcomitans D11S-1 beta-methylgalactoside transporter inner membrane component YP_003255450.1 754879 R 668336 CDS YP_003255451.1 261867529 8536555 755909..756133 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein W 756133 8536555 D11S_0836 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein W YP_003255451.1 755909 D 668336 CDS YP_003255452.1 261867530 8536556 756137..756556 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein W 756556 8536556 D11S_0837 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein W YP_003255452.1 756137 D 668336 CDS YP_003255453.1 261867531 8536557 complement(756623..758299) 1 NC_013416.1 identified by Glimmer3; putative; RecN protein 758299 8536557 D11S_0838 Aggregatibacter actinomycetemcomitans D11S-1 RecN protein YP_003255453.1 756623 R 668336 CDS YP_003255454.1 261867532 8536558 complement(758373..759290) 1 NC_013416.1 identified by Glimmer3; putative; ATP-NAD kinase 759290 8536558 D11S_0839 Aggregatibacter actinomycetemcomitans D11S-1 ATP-NAD kinase YP_003255454.1 758373 R 668336 CDS YP_003255455.1 261867533 8536559 complement(759335..759463) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 759463 8536559 D11S_0840 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255455.1 759335 R 668336 CDS YP_003255456.1 261867534 8536560 759431..760009 1 NC_013416.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 760009 8536560 D11S_0841 Aggregatibacter actinomycetemcomitans D11S-1 heat shock protein GrpE YP_003255456.1 759431 D 668336 CDS YP_003255457.1 261867535 8536561 complement(760120..763191) 1 NC_013416.1 identified by Glimmer3; putative; hemoglobin binding protein A 763191 8536561 D11S_0842 Aggregatibacter actinomycetemcomitans D11S-1 hemoglobin binding protein A YP_003255457.1 760120 R 668336 CDS YP_003255458.1 261867536 8536562 complement(763381..765399) 1 NC_013416.1 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 765399 mnmC 8536562 mnmC Aggregatibacter actinomycetemcomitans D11S-1 5-methylaminomethyl-2-thiouridine methyltransferase YP_003255458.1 763381 R 668336 CDS YP_003255459.1 261867537 8536563 765569..766789 1 NC_013416.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase I 766789 8536563 D11S_0844 Aggregatibacter actinomycetemcomitans D11S-1 3-oxoacyl-(acyl carrier protein) synthase I YP_003255459.1 765569 D 668336 CDS YP_003255460.1 261867538 8536564 complement(766770..766904) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 766904 8536564 D11S_0845 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255460.1 766770 R 668336 CDS YP_003255461.1 261867539 8536565 766930..768789 1 NC_013416.1 identified by Glimmer3; putative; aerobic respiration control sensor protein ArcB 768789 8536565 D11S_0846 Aggregatibacter actinomycetemcomitans D11S-1 aerobic respiration control sensor protein ArcB YP_003255461.1 766930 D 668336 CDS YP_003255462.1 261867540 8536566 complement(768863..769873) 1 NC_013416.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; beta-methylgalactoside transporter inner membrane component 769873 mglC 8536566 mglC Aggregatibacter actinomycetemcomitans D11S-1 beta-methylgalactoside transporter inner membrane component YP_003255462.1 768863 R 668336 CDS YP_003255463.1 261867541 8536567 complement(769892..771430) 1 NC_013416.1 with MglBC transports galactose or methyl galactoside into the cell; contains 2 ATP binding domains; galactose/methyl galaxtoside transporter ATP-binding protein 771430 8536567 D11S_0848 Aggregatibacter actinomycetemcomitans D11S-1 galactose/methyl galaxtoside transporter ATP-binding protein YP_003255463.1 769892 R 668336 CDS YP_003255464.1 261867542 8536568 complement(771505..772497) 1 NC_013416.1 identified by Glimmer3; putative; D-galactose-binding periplasmic protein 772497 8536568 D11S_0849 Aggregatibacter actinomycetemcomitans D11S-1 D-galactose-binding periplasmic protein YP_003255464.1 771505 R 668336 CDS YP_003255465.1 261867543 8536569 complement(772712..773725) 1 NC_013416.1 identified by Glimmer3; putative; HTH-type transcriptional regulator GalS 773725 8536569 D11S_0850 Aggregatibacter actinomycetemcomitans D11S-1 HTH-type transcriptional regulator GalS YP_003255465.1 772712 R 668336 CDS YP_003255466.1 261867544 8536570 773977..775020 1 NC_013416.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 775020 8536570 D11S_0851 Aggregatibacter actinomycetemcomitans D11S-1 galactose-1-phosphate uridylyltransferase YP_003255466.1 773977 D 668336 CDS YP_003255467.1 261867545 8536571 775087..776241 1 NC_013416.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 776241 8536571 D11S_0852 Aggregatibacter actinomycetemcomitans D11S-1 galactokinase YP_003255467.1 775087 D 668336 CDS YP_003255468.1 261867546 8536572 776235..777266 1 NC_013416.1 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 777266 galM 8536572 galM Aggregatibacter actinomycetemcomitans D11S-1 aldose 1-epimerase YP_003255468.1 776235 D 668336 CDS YP_003255469.1 261867547 8536574 complement(777531..779030) 1 NC_013416.1 identified by Glimmer3; putative; DsbB family disulfide bond formation protein 779030 8536574 D11S_0855 Aggregatibacter actinomycetemcomitans D11S-1 DsbB family disulfide bond formation protein YP_003255469.1 777531 R 668336 CDS YP_003255470.1 261867548 8536575 complement(779309..780742) 1 NC_013416.1 identified by Glimmer3; putative; inner membrane protein YbhI 780742 8536575 D11S_0856 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane protein YbhI YP_003255470.1 779309 R 668336 CDS YP_003255471.1 261867549 8536576 complement(780729..782141) 1 NC_013416.1 identified by Glimmer3; putative; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase/2-(5-triphosphoribosyl)-3-dephosphocoenzyme- A synthase 782141 8536576 D11S_0857 Aggregatibacter actinomycetemcomitans D11S-1 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase/2-(5-triphosphoribosyl)-3-dephosphocoenzyme- A synthase YP_003255471.1 780729 R 668336 CDS YP_003255472.1 261867550 8536577 complement(782335..783837) 1 NC_013416.1 identified by Glimmer3; putative; citrate lyase subunit alpha 783837 8536577 D11S_0858 Aggregatibacter actinomycetemcomitans D11S-1 citrate lyase subunit alpha YP_003255472.1 782335 R 668336 CDS YP_003255473.1 261867551 8536578 complement(783852..784727) 1 NC_013416.1 identified by Glimmer3; putative; citrate lyase subunit beta 784727 8536578 D11S_0859 Aggregatibacter actinomycetemcomitans D11S-1 citrate lyase subunit beta YP_003255473.1 783852 R 668336 CDS YP_003255474.1 261867552 8536579 complement(784724..785011) 1 NC_013416.1 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 785011 8536579 D11S_0860 Aggregatibacter actinomycetemcomitans D11S-1 citrate lyase subunit gamma YP_003255474.1 784724 R 668336 CDS YP_003255475.1 261867553 8536580 complement(785051..786058) 1 NC_013416.1 identified by Glimmer3; putative; [citrate (pro-3S)-lyase] ligase 786058 8536580 D11S_0861 Aggregatibacter actinomycetemcomitans D11S-1 [citrate (pro-3S)-lyase] ligase YP_003255475.1 785051 R 668336 CDS YP_003255476.1 261867554 8536581 complement(786096..786224) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 786224 8536581 D11S_0862 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255476.1 786096 R 668336 CDS YP_003255477.1 261867555 8536582 786304..787200 1 NC_013416.1 identified by Glimmer3; putative; magnesium and cobalt efflux protein CorC 787200 8536582 D11S_0863 Aggregatibacter actinomycetemcomitans D11S-1 magnesium and cobalt efflux protein CorC YP_003255477.1 786304 D 668336 CDS YP_003255478.1 261867556 8536583 787592..789136 1 NC_013416.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 789136 lnt 8536583 lnt Aggregatibacter actinomycetemcomitans D11S-1 apolipoprotein N-acyltransferase YP_003255478.1 787592 D 668336 CDS YP_003255479.1 261867557 8536584 complement(789199..789417) 1 NC_013416.1 identified by Glimmer3; putative; translation initiation factor IF-1 789417 8536584 D11S_0865 Aggregatibacter actinomycetemcomitans D11S-1 translation initiation factor IF-1 YP_003255479.1 789199 R 668336 CDS YP_003255480.1 261867558 8536585 789472..789594 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 789594 8536585 D11S_0866 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255480.1 789472 D 668336 CDS YP_003255481.1 261867559 8536586 789637..790944 1 NC_013416.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase B 790944 8536586 D11S_0867 Aggregatibacter actinomycetemcomitans D11S-1 aminopeptidase B YP_003255481.1 789637 D 668336 CDS YP_003255482.1 261867560 8536587 790956..791381 1 NC_013416.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 791381 ndk 8536587 ndk Aggregatibacter actinomycetemcomitans D11S-1 nucleoside diphosphate kinase YP_003255482.1 790956 D 668336 CDS YP_003255483.1 261867561 8536588 791517..792662 1 NC_013416.1 identified by Glimmer3; putative; Chb protein 792662 8536588 D11S_0869 Aggregatibacter actinomycetemcomitans D11S-1 Chb protein YP_003255483.1 791517 D 668336 CDS YP_003255484.1 261867562 8536589 792655..792774 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 792774 8536589 D11S_0870 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255484.1 792655 D 668336 CDS YP_003255485.1 261867563 8536590 complement(792752..793864) 1 NC_013416.1 identified by Glimmer3; putative; putative ATPase 793864 8536590 D11S_0871 Aggregatibacter actinomycetemcomitans D11S-1 putative ATPase YP_003255485.1 792752 R 668336 CDS YP_003255486.1 261867564 8536591 794037..796097 1 NC_013416.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 796097 metG 8536591 metG Aggregatibacter actinomycetemcomitans D11S-1 methionyl-tRNA synthetase YP_003255486.1 794037 D 668336 CDS YP_003255487.1 261867565 8536592 complement(796231..796425) 1 NC_013416.1 identified by Glimmer3; putative; FeS assembly protein IscX 796425 8536592 D11S_0873 Aggregatibacter actinomycetemcomitans D11S-1 FeS assembly protein IscX YP_003255487.1 796231 R 668336 CDS YP_003255488.1 261867566 8536593 complement(796425..796766) 1 NC_013416.1 identified by Glimmer3; putative; 2Fe-2S type ferredoxin 796766 8536593 D11S_0874 Aggregatibacter actinomycetemcomitans D11S-1 2Fe-2S type ferredoxin YP_003255488.1 796425 R 668336 CDS YP_003255489.1 261867567 8536594 complement(796778..798637) 1 NC_013416.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 798637 hscA 8536594 hscA Aggregatibacter actinomycetemcomitans D11S-1 chaperone protein HscA YP_003255489.1 796778 R 668336 CDS YP_003255490.1 261867568 8536595 complement(798658..799179) 1 NC_013416.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 799179 hscB 8536595 hscB Aggregatibacter actinomycetemcomitans D11S-1 co-chaperone HscB YP_003255490.1 798658 R 668336 CDS YP_003255491.1 261867569 8536596 complement(799191..799514) 1 NC_013416.1 identified by Glimmer3; putative; iron-sulfur cluster assembly protein IscA 799514 8536596 D11S_0877 Aggregatibacter actinomycetemcomitans D11S-1 iron-sulfur cluster assembly protein IscA YP_003255491.1 799191 R 668336 CDS YP_003255492.1 261867570 8536597 complement(799646..800029) 1 NC_013416.1 identified by Glimmer3; putative; FeS cluster assembly scaffold IscU 800029 8536597 D11S_0878 Aggregatibacter actinomycetemcomitans D11S-1 FeS cluster assembly scaffold IscU YP_003255492.1 799646 R 668336 CDS YP_003255493.1 261867571 8536598 complement(800089..801303) 1 NC_013416.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 801303 8536598 D11S_0879 Aggregatibacter actinomycetemcomitans D11S-1 cysteine desulfurase YP_003255493.1 800089 R 668336 CDS YP_003255494.1 261867572 8536599 complement(801357..801830) 1 NC_013416.1 identified by Glimmer3; putative; iron-sulfur cluster assembly transcription factor IscR 801830 8536599 D11S_0880 Aggregatibacter actinomycetemcomitans D11S-1 iron-sulfur cluster assembly transcription factor IscR YP_003255494.1 801357 R 668336 CDS YP_003255495.1 261867573 8536600 complement(801908..802633) 1 NC_013416.1 identified by Glimmer3; putative; TrmH family RNA methyltransferase 802633 8536600 D11S_0881 Aggregatibacter actinomycetemcomitans D11S-1 TrmH family RNA methyltransferase YP_003255495.1 801908 R 668336 CDS YP_003255496.1 261867574 8536601 802784..803584 1 NC_013416.1 identified by Glimmer3; putative; inositol-1-monophosphatase 803584 8536601 D11S_0882 Aggregatibacter actinomycetemcomitans D11S-1 inositol-1-monophosphatase YP_003255496.1 802784 D 668336 CDS YP_003255497.1 261867575 8536602 complement(803637..805748) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 805748 8536602 D11S_0883 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255497.1 803637 R 668336 CDS YP_003255498.1 261867576 8536603 complement(806027..807073) 1 NC_013416.1 Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import; ferric transporter ATP-binding subunit 807073 fbpC 8536603 fbpC Aggregatibacter actinomycetemcomitans D11S-1 ferric transporter ATP-binding subunit YP_003255498.1 806027 R 668336 CDS YP_003255499.1 261867577 8536604 complement(807089..809146) 1 NC_013416.1 identified by Glimmer3; putative; binding-protein-dependent transport systems inner membrane component 809146 8536604 D11S_0885 Aggregatibacter actinomycetemcomitans D11S-1 binding-protein-dependent transport systems inner membrane component YP_003255499.1 807089 R 668336 CDS YP_003255500.1 261867578 8536605 complement(809174..809926) 1 NC_013416.1 identified by Glimmer3; putative; Fe3+ ABC transporter iron-binding protein 809926 8536605 D11S_0886 Aggregatibacter actinomycetemcomitans D11S-1 Fe3+ ABC transporter iron-binding protein YP_003255500.1 809174 R 668336 CDS YP_003255501.1 261867579 8536606 complement(810379..811419) 1 NC_013416.1 identified by Glimmer3; putative; cystathionine beta-lyase 811419 8536606 D11S_0887 Aggregatibacter actinomycetemcomitans D11S-1 cystathionine beta-lyase YP_003255501.1 810379 R 668336 CDS YP_003255502.1 261867580 8536607 811728..812378 1 NC_013416.1 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 812378 8536607 D11S_0888 Aggregatibacter actinomycetemcomitans D11S-1 uridine kinase YP_003255502.1 811728 D 668336 CDS YP_003255503.1 261867581 8536608 812388..812972 1 NC_013416.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 812972 dcd 8536608 dcd Aggregatibacter actinomycetemcomitans D11S-1 deoxycytidine triphosphate deaminase YP_003255503.1 812388 D 668336 CDS YP_003255504.1 261867582 8536609 812973..814175 1 NC_013416.1 identified by Glimmer3; putative; sugar efflux transporter 814175 8536609 D11S_0890 Aggregatibacter actinomycetemcomitans D11S-1 sugar efflux transporter YP_003255504.1 812973 D 668336 CDS YP_003255505.1 261867583 8536610 814177..815373 1 NC_013416.1 identified by Glimmer3; putative; sugar efflux transporter 815373 8536610 D11S_0891 Aggregatibacter actinomycetemcomitans D11S-1 sugar efflux transporter YP_003255505.1 814177 D 668336 CDS YP_003255506.1 261867584 8536611 complement(815443..816975) 1 NC_013416.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 816975 engA 8536611 engA Aggregatibacter actinomycetemcomitans D11S-1 GTP-binding protein EngA YP_003255506.1 815443 R 668336 CDS YP_003255507.1 261867585 8536612 817263..818246 1 NC_013416.1 identified by Glimmer3; putative; curved DNA-binding protein 818246 8536612 D11S_0893 Aggregatibacter actinomycetemcomitans D11S-1 curved DNA-binding protein YP_003255507.1 817263 D 668336 CDS YP_003255508.1 261867586 8536613 818269..818559 1 NC_013416.1 identified by Glimmer3; putative; MerR family regulatory protein 818559 8536613 D11S_0894 Aggregatibacter actinomycetemcomitans D11S-1 MerR family regulatory protein YP_003255508.1 818269 D 668336 CDS YP_003255509.1 261867587 8536614 complement(818624..819922) 1 NC_013416.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 819922 8536614 D11S_0895 Aggregatibacter actinomycetemcomitans D11S-1 adenylosuccinate synthetase YP_003255509.1 818624 R 668336 CDS YP_003255510.1 261867588 8536615 complement(820010..820975) 1 NC_013416.1 identified by Glimmer3; putative; methyltransferase 820975 8536615 D11S_0896 Aggregatibacter actinomycetemcomitans D11S-1 methyltransferase YP_003255510.1 820010 R 668336 CDS YP_003255511.1 261867589 8536616 complement(820989..822509) 1 NC_013416.1 identified by Glimmer3; putative; sodium/proline symporter 822509 8536616 D11S_0897 Aggregatibacter actinomycetemcomitans D11S-1 sodium/proline symporter YP_003255511.1 820989 R 668336 CDS YP_003255512.1 261867590 8536617 822650..824125 1 NC_013416.1 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 824125 8536617 D11S_0898 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease G YP_003255512.1 822650 D 668336 CDS YP_003255513.1 261867591 8536618 824242..824889 1 NC_013416.1 cofactor involved in the reduction of disulfides; glutaredoxin 2 824889 8536618 D11S_0899 Aggregatibacter actinomycetemcomitans D11S-1 glutaredoxin 2 YP_003255513.1 824242 D 668336 CDS YP_003255514.1 261867592 8536619 824905..825603 1 NC_013416.1 identified by Glimmer3; putative; Sir2 family transcriptional regulator 825603 8536619 D11S_0900 Aggregatibacter actinomycetemcomitans D11S-1 Sir2 family transcriptional regulator YP_003255514.1 824905 D 668336 CDS YP_003255515.1 261867593 8536620 825676..826047 1 NC_013416.1 identified by Glimmer3; putative; IS3/IS911 transposase 826047 8536620 D11S_0901 Aggregatibacter actinomycetemcomitans D11S-1 IS3/IS911 transposase YP_003255515.1 825676 D 668336 CDS YP_003255516.1 261867594 8536621 complement(826945..827487) 1 NC_013416.1 identified by Glimmer3; putative; relaxase 827487 8536621 D11S_0902 Aggregatibacter actinomycetemcomitans D11S-1 relaxase YP_003255516.1 826945 R 668336 CDS YP_003255517.1 261867595 8536622 827841..827960 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 827960 8536622 D11S_0903 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255517.1 827841 D 668336 CDS YP_003255518.1 261867596 8536623 828274..828453 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 828453 8536623 D11S_0904 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255518.1 828274 D 668336 CDS YP_003255519.1 261867597 8536624 829026..829280 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 829280 8536624 D11S_0905 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255519.1 829026 D 668336 CDS YP_003255520.1 261867598 8536625 829283..829627 1 NC_013416.1 identified by Glimmer3; putative; transcriptional modulator of MazE/toxin, MazF 829627 8536625 D11S_0906 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional modulator of MazE/toxin, MazF YP_003255520.1 829283 D 668336 CDS YP_003255521.1 261867599 8536626 829711..829977 1 NC_013416.1 identified by Glimmer3; putative; putative virulence protein 829977 8536626 D11S_0907 Aggregatibacter actinomycetemcomitans D11S-1 putative virulence protein YP_003255521.1 829711 D 668336 CDS YP_003255522.1 261867600 8536627 830196..830864 1 NC_013416.1 identified by Glimmer3; putative; cytolethal distending toxin protein A 830864 8536627 D11S_0908 Aggregatibacter actinomycetemcomitans D11S-1 cytolethal distending toxin protein A YP_003255522.1 830196 D 668336 CDS YP_003255523.1 261867601 8536628 830879..831730 1 NC_013416.1 identified by Glimmer3; putative; cytolethal distending toxin protein B 831730 8536628 D11S_0909 Aggregatibacter actinomycetemcomitans D11S-1 cytolethal distending toxin protein B YP_003255523.1 830879 D 668336 CDS YP_003255524.1 261867602 8536629 831741..832301 1 NC_013416.1 identified by Glimmer3; putative; cytolethal distending toxin protein C 832301 8536629 D11S_0910 Aggregatibacter actinomycetemcomitans D11S-1 cytolethal distending toxin protein C YP_003255524.1 831741 D 668336 CDS YP_003255525.1 261867603 8536630 complement(833519..833662) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 833662 8536630 D11S_0911 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255525.1 833519 R 668336 CDS YP_003255526.1 261867604 8536631 complement(833670..833831) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 833831 8536631 D11S_0912 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255526.1 833670 R 668336 CDS YP_003255527.1 261867605 8536635 complement(834555..835112) 1 NC_013416.1 identified by Glimmer3; putative; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 835112 8536635 D11S_0916 Aggregatibacter actinomycetemcomitans D11S-1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003255527.1 834555 R 668336 CDS YP_003255528.1 261867606 8536636 835367..836557 1 NC_013416.1 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 836557 8536636 D11S_0917 Aggregatibacter actinomycetemcomitans D11S-1 cystathionine beta-lyase YP_003255528.1 835367 D 668336 CDS YP_003255529.1 261867607 8536637 836771..837823 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 39 837823 8536637 D11S_0918 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein 39 YP_003255529.1 836771 D 668336 CDS YP_003255530.1 261867608 8536638 837967..838224 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 838224 8536638 D11S_0919 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255530.1 837967 D 668336 CDS YP_003255531.1 261867609 8536639 838224..838571 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 838571 8536639 D11S_0920 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255531.1 838224 D 668336 CDS YP_003255532.1 261867610 8536640 complement(838649..839776) 1 NC_013416.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 839776 8536640 D11S_0921 Aggregatibacter actinomycetemcomitans D11S-1 chaperone protein DnaJ YP_003255532.1 838649 R 668336 CDS YP_003255533.1 261867611 8536641 complement(840211..842112) 1 NC_013416.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 842112 dnaK 8536641 dnaK Aggregatibacter actinomycetemcomitans D11S-1 molecular chaperone DnaK YP_003255533.1 840211 R 668336 CDS YP_003255534.1 261867612 8536642 842398..843831 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 843831 8536642 D11S_0923 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255534.1 842398 D 668336 CDS YP_003255535.1 261867613 8536643 complement(844191..845924) 1 NC_013416.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 845924 argS 8536643 argS Aggregatibacter actinomycetemcomitans D11S-1 arginyl-tRNA synthetase YP_003255535.1 844191 R 668336 CDS YP_003255536.1 261867614 8536644 846021..846608 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 846608 8536644 D11S_0925 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255536.1 846021 D 668336 CDS YP_003255537.1 261867615 8536645 846650..847105 1 NC_013416.1 identified by Glimmer3; putative; outer membrane lipoprotein pcp 847105 8536645 D11S_0926 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane lipoprotein pcp YP_003255537.1 846650 D 668336 CDS YP_003255538.1 261867616 8536646 847245..848327 1 NC_013416.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 848327 prfA 8536646 prfA Aggregatibacter actinomycetemcomitans D11S-1 peptide chain release factor 1 YP_003255538.1 847245 D 668336 CDS YP_003255539.1 261867617 8536647 848367..849266 1 NC_013416.1 identified by Glimmer3; putative; protein-(glutamine-N5) methyltransferase 849266 8536647 D11S_0928 Aggregatibacter actinomycetemcomitans D11S-1 protein-(glutamine-N5) methyltransferase YP_003255539.1 848367 D 668336 CDS YP_003255540.1 261867618 8536648 849276..850130 1 NC_013416.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 850130 8536648 D11S_0929 Aggregatibacter actinomycetemcomitans D11S-1 2-dehydro-3-deoxyphosphooctonate aldolase YP_003255540.1 849276 D 668336 CDS YP_003255541.1 261867619 8536649 850310..850819 1 NC_013416.1 identified by Glimmer3; putative; NlpC 850819 8536649 D11S_0930 Aggregatibacter actinomycetemcomitans D11S-1 NlpC YP_003255541.1 850310 D 668336 CDS YP_003255542.1 261867620 8536650 complement(851216..851467) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 851467 8536650 D11S_0931 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255542.1 851216 R 668336 CDS YP_003255543.1 261867621 8536651 851551..852213 1 NC_013416.1 identified by Glimmer3; putative; septum site-determining protein MinC 852213 8536651 D11S_0932 Aggregatibacter actinomycetemcomitans D11S-1 septum site-determining protein MinC YP_003255543.1 851551 D 668336 CDS YP_003255544.1 261867622 8536652 complement(852235..852780) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 852780 8536652 D11S_0933 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255544.1 852235 R 668336 CDS YP_003255545.1 261867623 8536653 complement(853004..853471) 1 NC_013416.1 identified by Glimmer3; putative; phosphohistidine phosphatase SixA 853471 8536653 D11S_0934 Aggregatibacter actinomycetemcomitans D11S-1 phosphohistidine phosphatase SixA YP_003255545.1 853004 R 668336 CDS YP_003255546.1 261867624 8536654 complement(853484..854821) 1 NC_013416.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 854821 glmM 8536654 glmM Aggregatibacter actinomycetemcomitans D11S-1 phosphoglucosamine mutase YP_003255546.1 853484 R 668336 CDS YP_003255547.1 261867625 8536655 complement(854850..855677) 1 NC_013416.1 identified by Glimmer3; putative; dihydropteroate synthase 855677 8536655 D11S_0936 Aggregatibacter actinomycetemcomitans D11S-1 dihydropteroate synthase YP_003255547.1 854850 R 668336 CDS YP_003255548.1 261867626 8536656 complement(855847..856881) 1 NC_013416.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 856881 8536656 D11S_0937 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase IV YP_003255548.1 855847 R 668336 CDS YP_003255549.1 261867627 8536657 complement(857005..857259) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 857259 8536657 D11S_0938 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255549.1 857005 R 668336 CDS YP_003255550.1 261867628 8536658 857681..858130 1 NC_013416.1 identified by Glimmer3; putative; ImpA 858130 8536658 D11S_0939 Aggregatibacter actinomycetemcomitans D11S-1 ImpA YP_003255550.1 857681 D 668336 CDS YP_003255551.1 261867629 8536659 complement(858403..858567) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 858567 8536659 D11S_0940 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255551.1 858403 R 668336 CDS YP_003255552.1 261867630 8536660 complement(858862..860328) 1 NC_013416.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 860328 8536660 D11S_0941 Aggregatibacter actinomycetemcomitans D11S-1 inosine 5'-monophosphate dehydrogenase YP_003255552.1 858862 R 668336 CDS YP_003255553.1 261867631 8536661 860470..861402 1 NC_013416.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 861402 8536661 D11S_0942 Aggregatibacter actinomycetemcomitans D11S-1 biotin--protein ligase YP_003255553.1 860470 D 668336 CDS YP_003255554.1 261867632 8536662 861489..861692 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 861692 8536662 D11S_0943 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255554.1 861489 D 668336 CDS YP_003255556.1 261867634 8536668 complement(867547..868365) 1 NC_013416.1 identified by Glimmer3; putative; peptide transport system ATP-binding protein SapF 868365 8536668 D11S_0949 Aggregatibacter actinomycetemcomitans D11S-1 peptide transport system ATP-binding protein SapF YP_003255556.1 867547 R 668336 CDS YP_003255557.1 261867635 8536669 complement(868369..869421) 1 NC_013416.1 identified by Glimmer3; putative; peptide transport system ATP-binding protein SapD 869421 8536669 D11S_0950 Aggregatibacter actinomycetemcomitans D11S-1 peptide transport system ATP-binding protein SapD YP_003255557.1 868369 R 668336 CDS YP_003255558.1 261867636 8536670 complement(869429..870316) 1 NC_013416.1 identified by Glimmer3; putative; dipeptide transport system permease DppC 870316 8536670 D11S_0951 Aggregatibacter actinomycetemcomitans D11S-1 dipeptide transport system permease DppC YP_003255558.1 869429 R 668336 CDS YP_003255559.1 261867637 8536671 complement(870306..871271) 1 NC_013416.1 identified by Glimmer3; putative; peptide transport system permease SapB 871271 8536671 D11S_0952 Aggregatibacter actinomycetemcomitans D11S-1 peptide transport system permease SapB YP_003255559.1 870306 R 668336 CDS YP_003255560.1 261867638 8536672 complement(871271..872902) 1 NC_013416.1 identified by Glimmer3; putative; SapA 872902 8536672 D11S_0953 Aggregatibacter actinomycetemcomitans D11S-1 SapA YP_003255560.1 871271 R 668336 CDS YP_003255561.1 261867639 8536673 873167..874582 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 874582 8536673 D11S_0954 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255561.1 873167 D 668336 CDS YP_003255562.1 261867640 8536674 874595..875674 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 875674 8536674 D11S_0955 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255562.1 874595 D 668336 CDS YP_003255563.1 261867641 8536675 875758..876717 1 NC_013416.1 identified by Glimmer3; putative; GTP-binding proten HflX 876717 8536675 D11S_0956 Aggregatibacter actinomycetemcomitans D11S-1 GTP-binding proten HflX YP_003255563.1 875758 D 668336 CDS YP_003255564.1 261867642 8536676 complement(876714..876848) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 876848 8536676 D11S_0957 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255564.1 876714 R 668336 CDS YP_003255565.1 261867643 8536677 complement(876933..877082) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 877082 8536677 D11S_0958 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255565.1 876933 R 668336 CDS YP_003255566.1 261867644 8536678 complement(877097..877393) 1 NC_013416.1 identified by Glimmer3; putative; Host factor-I protein 877393 8536678 D11S_0959 Aggregatibacter actinomycetemcomitans D11S-1 Host factor-I protein YP_003255566.1 877097 R 668336 CDS YP_003255567.1 261867645 8536679 complement(877512..878456) 1 NC_013416.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 878456 miaA 8536679 miaA Aggregatibacter actinomycetemcomitans D11S-1 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003255567.1 877512 R 668336 CDS YP_003255568.1 261867646 8536680 complement(878471..880321) 1 NC_013416.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 880321 mutL 8536680 mutL Aggregatibacter actinomycetemcomitans D11S-1 DNA mismatch repair protein YP_003255568.1 878471 R 668336 CDS YP_003255569.1 261867647 8536681 complement(880321..881808) 1 NC_013416.1 identified by Glimmer3; putative; N-acetylmuramoyl-L-alanine amidase 881808 8536681 D11S_0962 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylmuramoyl-L-alanine amidase YP_003255569.1 880321 R 668336 CDS YP_003255570.1 261867648 8536682 complement(881805..882257) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 882257 8536682 D11S_0963 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255570.1 881805 R 668336 CDS YP_003255571.1 261867649 8536683 882256..882402 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 882402 8536683 D11S_0964 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255571.1 882256 D 668336 CDS YP_003255572.1 261867650 8536684 complement(882455..884248) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 884248 8536684 D11S_0965 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255572.1 882455 R 668336 CDS YP_003255573.1 261867651 8536685 complement(884636..885556) 1 NC_013416.1 identified by Glimmer3; putative; glycosyl transferase, family 2 885556 8536685 D11S_0966 Aggregatibacter actinomycetemcomitans D11S-1 glycosyl transferase, family 2 YP_003255573.1 884636 R 668336 CDS YP_003255574.1 261867652 8536686 complement(885564..887072) 1 NC_013416.1 identified by Glimmer3; putative; putative inner membrane protein 887072 8536686 D11S_0967 Aggregatibacter actinomycetemcomitans D11S-1 putative inner membrane protein YP_003255574.1 885564 R 668336 CDS YP_003255575.1 261867653 8536687 complement(887059..887676) 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein 887676 8536687 D11S_0968 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein YP_003255575.1 887059 R 668336 CDS YP_003255576.1 261867654 8536688 complement(887705..889219) 1 NC_013416.1 identified by Glimmer3; putative; Dca 889219 8536688 D11S_0969 Aggregatibacter actinomycetemcomitans D11S-1 Dca YP_003255576.1 887705 R 668336 CDS YP_003255577.1 261867655 8536690 complement(889738..890286) 1 NC_013416.1 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 890286 8536690 D11S_0971 Aggregatibacter actinomycetemcomitans D11S-1 oligoribonuclease YP_003255577.1 889738 R 668336 CDS YP_003255578.1 261867656 8536691 890357..891397 1 NC_013416.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 891397 8536691 D11S_0972 Aggregatibacter actinomycetemcomitans D11S-1 ribosome-associated GTPase YP_003255578.1 890357 D 668336 CDS YP_003255579.1 261867657 8536692 891618..891875 1 NC_013416.1 identified by Glimmer3; putative; phosphocarrier protein HPr 891875 8536692 D11S_0973 Aggregatibacter actinomycetemcomitans D11S-1 phosphocarrier protein HPr YP_003255579.1 891618 D 668336 CDS YP_003255580.1 261867658 8536693 891989..893716 1 NC_013416.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 893716 8536693 D11S_0974 Aggregatibacter actinomycetemcomitans D11S-1 phosphoenolpyruvate-protein phosphotransferase YP_003255580.1 891989 D 668336 CDS YP_003255581.1 261867659 8536694 893777..894277 1 NC_013416.1 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter subunit 894277 8536694 D11S_0975 Aggregatibacter actinomycetemcomitans D11S-1 PTS system glucose-specific transporter subunit YP_003255581.1 893777 D 668336 CDS YP_003255582.1 261867660 8536695 complement(894403..896442) 1 NC_013416.1 identified by Glimmer3; putative; oligopeptidase A 896442 8536695 D11S_0976 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptidase A YP_003255582.1 894403 R 668336 CDS YP_003255583.1 261867661 8536696 896584..896949 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 896949 8536696 D11S_0977 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255583.1 896584 D 668336 CDS YP_003255584.1 261867662 8536697 897005..898543 1 NC_013416.1 identified by Glimmer3; putative; periplasmic oligopeptide-binding protein 898543 8536697 D11S_0978 Aggregatibacter actinomycetemcomitans D11S-1 periplasmic oligopeptide-binding protein YP_003255584.1 897005 D 668336 CDS YP_003255585.1 261867663 8536698 complement(898818..899405) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 899405 8536698 D11S_0979 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255585.1 898818 R 668336 CDS YP_003255586.1 261867664 8536699 complement(899408..900382) 1 NC_013416.1 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I 900382 8536699 D11S_0980 Aggregatibacter actinomycetemcomitans D11S-1 para-aminobenzoate synthase component I YP_003255586.1 899408 R 668336 CDS YP_003255587.1 261867665 8536700 900484..901050 1 NC_013416.1 catalyzes the formation of anthranilate from chorismate and glutamine; functions in tryptophan biosynthesis; putative anthranilate synthase component II 901050 8536700 D11S_0981 Aggregatibacter actinomycetemcomitans D11S-1 putative anthranilate synthase component II YP_003255587.1 900484 D 668336 CDS YP_003255588.1 261867666 8536701 901206..902150 1 NC_013416.1 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 902150 8536701 D11S_0982 Aggregatibacter actinomycetemcomitans D11S-1 glycerate dehydrogenase YP_003255588.1 901206 D 668336 CDS YP_003255589.1 261867667 8536702 902693..903877 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein releasing system, transmembrane protein LolC 903877 8536702 D11S_0983 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein releasing system, transmembrane protein LolC YP_003255589.1 902693 D 668336 CDS YP_003255590.1 261867668 8536703 903892..904578 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein releasing system, ATP-binding protein 904578 8536703 D11S_0984 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein releasing system, ATP-binding protein YP_003255590.1 903892 D 668336 CDS YP_003255591.1 261867669 8536704 904578..905828 1 NC_013416.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 905828 8536704 D11S_0985 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane-specific lipoprotein transporter subunit LolE YP_003255591.1 904578 D 668336 CDS YP_003255592.1 261867670 8536705 905929..907008 1 NC_013416.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 907008 8536705 D11S_0986 Aggregatibacter actinomycetemcomitans D11S-1 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003255592.1 905929 D 668336 CDS YP_003255593.1 261867671 8536706 complement(907017..907139) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 907139 8536706 D11S_0987 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255593.1 907017 R 668336 CDS YP_003255594.1 261867672 8536707 907154..908560 1 NC_013416.1 identified by Glimmer3; putative; replicative DNA helicase 908560 8536707 D11S_0988 Aggregatibacter actinomycetemcomitans D11S-1 replicative DNA helicase YP_003255594.1 907154 D 668336 CDS YP_003255595.1 261867673 8536708 908584..909666 1 NC_013416.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 909666 alr 8536708 alr Aggregatibacter actinomycetemcomitans D11S-1 alanine racemase YP_003255595.1 908584 D 668336 CDS YP_003255596.1 261867674 8536709 909682..911331 1 NC_013416.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 911331 pgi 8536709 pgi Aggregatibacter actinomycetemcomitans D11S-1 glucose-6-phosphate isomerase YP_003255596.1 909682 D 668336 CDS YP_003255597.1 261867675 8536710 911471..911944 1 NC_013416.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 911944 ribH 8536710 ribH Aggregatibacter actinomycetemcomitans D11S-1 6,7-dimethyl-8-ribityllumazine synthase YP_003255597.1 911471 D 668336 CDS YP_003255598.1 261867676 8536711 911951..912376 1 NC_013416.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 912376 nusB 8536711 nusB Aggregatibacter actinomycetemcomitans D11S-1 transcription antitermination protein NusB YP_003255598.1 911951 D 668336 CDS YP_003255599.1 261867677 8536712 912395..913378 1 NC_013416.1 identified by Glimmer3; putative; thiamine-monophosphate kinase 913378 8536712 D11S_0993 Aggregatibacter actinomycetemcomitans D11S-1 thiamine-monophosphate kinase YP_003255599.1 912395 D 668336 CDS YP_003255600.1 261867678 8536713 913388..913879 1 NC_013416.1 identified by Glimmer3; putative; phosphatidylglycerophosphatase A 913879 8536713 D11S_0994 Aggregatibacter actinomycetemcomitans D11S-1 phosphatidylglycerophosphatase A YP_003255600.1 913388 D 668336 CDS YP_003255601.1 261867679 8536714 913888..914508 1 NC_013416.1 identified by Glimmer3; putative; threonine efflux protein 914508 8536714 D11S_0995 Aggregatibacter actinomycetemcomitans D11S-1 threonine efflux protein YP_003255601.1 913888 D 668336 CDS YP_003255602.1 261867680 8536715 914530..915342 1 NC_013416.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 915342 8536715 D11S_0996 Aggregatibacter actinomycetemcomitans D11S-1 dihydrodipicolinate reductase YP_003255602.1 914530 D 668336 CDS YP_003255603.1 261867681 8536716 915370..915501 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 915501 8536716 D11S_0997 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255603.1 915370 D 668336 CDS YP_003255604.1 261867682 8536717 complement(915454..915702) 1 NC_013416.1 identified by Glimmer3; putative; Fdx protein 915702 8536717 D11S_0998 Aggregatibacter actinomycetemcomitans D11S-1 Fdx protein YP_003255604.1 915454 R 668336 CDS YP_003255605.1 261867683 8536718 complement(915770..916039) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 916039 8536718 D11S_0999 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255605.1 915770 R 668336 CDS YP_003255606.1 261867684 8536719 complement(916061..917191) 1 NC_013416.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 917191 nrdB 8536719 nrdB Aggregatibacter actinomycetemcomitans D11S-1 ribonucleotide-diphosphate reductase subunit beta YP_003255606.1 916061 R 668336 CDS YP_003255607.1 261867685 8536720 complement(918103..920373) 1 NC_013416.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 920373 8536720 D11S_1001 Aggregatibacter actinomycetemcomitans D11S-1 ribonucleotide-diphosphate reductase subunit alpha YP_003255607.1 918103 R 668336 CDS YP_003255608.1 261867686 8536721 complement(920676..922148) 1 NC_013416.1 identified by Glimmer3; putative; similar to type I restriction enzyme EcoR124II R protein; type I restriction enzyme R protein 922148 8536721 D11S_1002 Aggregatibacter actinomycetemcomitans D11S-1 type I restriction enzyme R protein YP_003255608.1 920676 R 668336 CDS YP_003255609.1 261867687 8536722 922286..922408 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 922408 8536722 D11S_1003 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255609.1 922286 D 668336 CDS YP_003255610.1 261867688 8536723 922419..923447 1 NC_013416.1 identified by Glimmer3; putative; Fe3+ ABC transporter iron-binding protein 923447 8536723 D11S_1004 Aggregatibacter actinomycetemcomitans D11S-1 Fe3+ ABC transporter iron-binding protein YP_003255610.1 922419 D 668336 CDS YP_003255611.1 261867689 8536724 923499..925529 1 NC_013416.1 identified by Glimmer3; putative; ferric transport system permease 925529 8536724 D11S_1005 Aggregatibacter actinomycetemcomitans D11S-1 ferric transport system permease YP_003255611.1 923499 D 668336 CDS YP_003255612.1 261867690 8536725 925513..926553 1 NC_013416.1 identified by Glimmer3; putative; Fe(3+) ions import ATP-binding protein FbpC 926553 8536725 D11S_1006 Aggregatibacter actinomycetemcomitans D11S-1 Fe(3+) ions import ATP-binding protein FbpC YP_003255612.1 925513 D 668336 CDS YP_003255613.1 261867691 8536726 complement(926512..926625) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 926625 8536726 D11S_1007 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255613.1 926512 R 668336 CDS YP_003255614.1 261867692 8536727 complement(926610..928661) 1 NC_013416.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; periplasmic alpha-amylase 928661 malS 8536727 malS Aggregatibacter actinomycetemcomitans D11S-1 periplasmic alpha-amylase YP_003255614.1 926610 R 668336 CDS YP_003255615.1 261867693 8536728 complement(928756..929646) 1 NC_013416.1 with MalKFE is involved in the transport of maltose into the cell; maltose transporter permease 929646 malG 8536728 malG Aggregatibacter actinomycetemcomitans D11S-1 maltose transporter permease YP_003255615.1 928756 R 668336 CDS YP_003255616.1 261867694 8536729 complement(929668..931212) 1 NC_013416.1 with MalKGE is involved in maltose transport into the cell; maltose transporter membrane protein 931212 malF 8536729 malF Aggregatibacter actinomycetemcomitans D11S-1 maltose transporter membrane protein YP_003255616.1 929668 R 668336 CDS YP_003255617.1 261867695 8536730 complement(931236..931367) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 931367 8536730 D11S_1011 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255617.1 931236 R 668336 CDS YP_003255618.1 261867696 8536731 complement(931336..932526) 1 NC_013416.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; maltose ABC transporter periplasmic protein 932526 malE 8536731 malE Aggregatibacter actinomycetemcomitans D11S-1 maltose ABC transporter periplasmic protein YP_003255618.1 931336 R 668336 CDS YP_003255619.1 261867697 8536732 932983..934101 1 NC_013416.1 with malEFG is involved in import of maltose/maltodextrin; maltose/maltodextrin transporter ATP-binding protein 934101 8536732 D11S_1013 Aggregatibacter actinomycetemcomitans D11S-1 maltose/maltodextrin transporter ATP-binding protein YP_003255619.1 932983 D 668336 CDS YP_003255620.1 261867698 8536733 934178..935461 1 NC_013416.1 porin involved in the transport of maltose and maltodextrins; maltoporin 935461 lamB 8536733 lamB Aggregatibacter actinomycetemcomitans D11S-1 maltoporin YP_003255620.1 934178 D 668336 CDS YP_003255621.1 261867699 8536734 935547..936446 1 NC_013416.1 identified by Glimmer3; putative; maltose regulon periplasmic protein 936446 8536734 D11S_1015 Aggregatibacter actinomycetemcomitans D11S-1 maltose regulon periplasmic protein YP_003255621.1 935547 D 668336 CDS YP_003255622.1 261867700 8536735 936517..936648 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 936648 8536735 D11S_1016 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255622.1 936517 D 668336 CDS YP_003255623.1 261867701 8536736 complement(936823..937554) 1 NC_013416.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 937554 8536736 D11S_1017 Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin biosynthesis protein MoeB YP_003255623.1 936823 R 668336 CDS YP_003255624.1 261867702 8536737 complement(937570..938784) 1 NC_013416.1 identified by Glimmer3; putative; molybdopterin biosynthesis MoeA protein 938784 8536737 D11S_1018 Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin biosynthesis MoeA protein YP_003255624.1 937570 R 668336 CDS YP_003255625.1 261867703 8536738 938913..939569 1 NC_013416.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 939569 folE 8536738 folE Aggregatibacter actinomycetemcomitans D11S-1 GTP cyclohydrolase I YP_003255625.1 938913 D 668336 CDS YP_003255626.1 261867704 8536739 complement(939668..941110) 1 NC_013416.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase/endopeptidase 941110 8536739 D11S_1020 Aggregatibacter actinomycetemcomitans D11S-1 D-alanyl-D-alanine carboxypeptidase/endopeptidase YP_003255626.1 939668 R 668336 CDS YP_003255627.1 261867705 8536740 941271..941747 1 NC_013416.1 identified by Glimmer3; putative; transcription elongation factor GreA 941747 8536740 D11S_1021 Aggregatibacter actinomycetemcomitans D11S-1 transcription elongation factor GreA YP_003255627.1 941271 D 668336 CDS YP_003255628.1 261867706 8536741 complement(941822..942124) 1 NC_013416.1 identified by Glimmer3; putative; 23S rRNA methyltransferase J 942124 8536741 D11S_1022 Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA methyltransferase J YP_003255628.1 941822 R 668336 CDS YP_003255629.1 261867707 8536742 942292..942603 1 NC_013416.1 identified by Glimmer3; putative; addiction module killer protein 942603 8536742 D11S_1023 Aggregatibacter actinomycetemcomitans D11S-1 addiction module killer protein YP_003255629.1 942292 D 668336 CDS YP_003255630.1 261867708 8536743 942588..942884 1 NC_013416.1 identified by Glimmer3; putative; putative transcriptional regulator 942884 8536743 D11S_1024 Aggregatibacter actinomycetemcomitans D11S-1 putative transcriptional regulator YP_003255630.1 942588 D 668336 CDS YP_003255631.1 261867709 8536744 complement(942917..943531) 1 NC_013416.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 943531 8536744 D11S_1025 Aggregatibacter actinomycetemcomitans D11S-1 riboflavin synthase subunit alpha YP_003255631.1 942917 R 668336 CDS YP_003255632.1 261867710 8536745 943558..944955 1 NC_013416.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 944955 8536745 D11S_1026 Aggregatibacter actinomycetemcomitans D11S-1 multidrug efflux protein YP_003255632.1 943558 D 668336 CDS YP_003255633.1 261867711 8536746 complement(945260..945739) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 945739 8536746 D11S_1027 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255633.1 945260 R 668336 CDS YP_003255634.1 261867712 8536747 945800..946771 1 NC_013416.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 946771 8536747 D11S_1028 Aggregatibacter actinomycetemcomitans D11S-1 aspartate-semialdehyde dehydrogenase YP_003255634.1 945800 D 668336 CDS YP_003255635.1 261867713 8536748 946827..947150 1 NC_013416.1 identified by Glimmer3; putative; bicyclomycin/multidrug efflux system 947150 8536748 D11S_1029 Aggregatibacter actinomycetemcomitans D11S-1 bicyclomycin/multidrug efflux system YP_003255635.1 946827 D 668336 CDS YP_003255636.1 261867714 8536749 948369..948671 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 948671 8536749 D11S_1030 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255636.1 948369 D 668336 CDS YP_003255637.1 261867715 8536750 948744..949481 1 NC_013416.1 identified by Glimmer3; putative; type IV secretion system protein VirB4 949481 8536750 D11S_1031 Aggregatibacter actinomycetemcomitans D11S-1 type IV secretion system protein VirB4 YP_003255637.1 948744 D 668336 CDS YP_003255638.1 261867716 8536751 949672..951213 1 NC_013416.1 identified by Glimmer3; putative; ATPase 951213 8536751 D11S_1032 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003255638.1 949672 D 668336 CDS YP_003255639.1 261867717 8536752 complement(951308..951565) 1 NC_013416.1 identified by Glimmer3; putative; transposase 951565 8536752 D11S_1033 Aggregatibacter actinomycetemcomitans D11S-1 transposase YP_003255639.1 951308 R 668336 CDS YP_003255640.1 261867718 8536753 complement(951720..951986) 1 NC_013416.1 identified by Glimmer3; putative; putative DNA-binding protein (phage related) 951986 8536753 D11S_1034 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA-binding protein (phage related) YP_003255640.1 951720 R 668336 CDS YP_003255641.1 261867719 8536754 952107..952901 1 NC_013416.1 identified by Glimmer3; putative; putative DNA-binding protein 952901 8536754 D11S_1035 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA-binding protein YP_003255641.1 952107 D 668336 CDS YP_003255642.1 261867720 8536755 complement(953196..953381) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 953381 8536755 D11S_1036 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255642.1 953196 R 668336 CDS YP_003255643.1 261867721 8536756 953432..953671 1 NC_013416.1 identified by Glimmer3; putative; NifC 953671 8536756 D11S_1037 Aggregatibacter actinomycetemcomitans D11S-1 NifC YP_003255643.1 953432 D 668336 CDS YP_003255644.1 261867722 8536757 953674..953934 1 NC_013416.1 identified by Glimmer3; putative; sulfate/thiosulfate import ATP-binding protein CysA 953934 8536757 D11S_1038 Aggregatibacter actinomycetemcomitans D11S-1 sulfate/thiosulfate import ATP-binding protein CysA YP_003255644.1 953674 D 668336 CDS YP_003255645.1 261867723 8536758 953937..954284 1 NC_013416.1 identified by Glimmer3; putative; sulfate/thiosulfate import ATP-binding protein CysA 954284 8536758 D11S_1039 Aggregatibacter actinomycetemcomitans D11S-1 sulfate/thiosulfate import ATP-binding protein CysA YP_003255645.1 953937 D 668336 CDS YP_003255646.1 261867724 8536759 954281..955141 1 NC_013416.1 involved in molybdenum transport; molybdenum transport protein ModD 955141 8536759 D11S_1040 Aggregatibacter actinomycetemcomitans D11S-1 molybdenum transport protein ModD YP_003255646.1 954281 D 668336 CDS YP_003255647.1 261867725 8536760 955214..955360 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 955360 8536760 D11S_1041 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255647.1 955214 D 668336 CDS YP_003255648.1 261867726 8536761 955437..956885 1 NC_013416.1 identified by Glimmer3; putative; TldD 956885 8536761 D11S_1042 Aggregatibacter actinomycetemcomitans D11S-1 TldD YP_003255648.1 955437 D 668336 CDS YP_003255649.1 261867727 8536762 956936..962707 1 NC_013416.1 identified by Glimmer3; putative; alpha-2-macroglobulin domain-containing protein 962707 8536762 D11S_1043 Aggregatibacter actinomycetemcomitans D11S-1 alpha-2-macroglobulin domain-containing protein YP_003255649.1 956936 D 668336 CDS YP_003255650.1 261867728 8536763 962838..963887 1 NC_013416.1 identified by Glimmer3; putative; phosphoenolpyruvate carboxylase 963887 8536763 D11S_1044 Aggregatibacter actinomycetemcomitans D11S-1 phosphoenolpyruvate carboxylase YP_003255650.1 962838 D 668336 CDS YP_003255651.1 261867729 8536764 964007..966364 1 NC_013416.1 identified by Glimmer3; putative; penicillin-binding protein 1C 966364 8536764 D11S_1045 Aggregatibacter actinomycetemcomitans D11S-1 penicillin-binding protein 1C YP_003255651.1 964007 D 668336 CDS YP_003255652.1 261867730 8536765 complement(966474..967148) 1 NC_013416.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; 3-keto-L-gulonate-6-phosphate decarboxylase 967148 ulaD 8536765 ulaD Aggregatibacter actinomycetemcomitans D11S-1 3-keto-L-gulonate-6-phosphate decarboxylase YP_003255652.1 966474 R 668336 CDS YP_003255653.1 261867731 8536766 complement(967225..967686) 1 NC_013416.1 identified by Glimmer3; putative; PTS system ascorbate-specific transporter subunit IIA 967686 8536766 D11S_1047 Aggregatibacter actinomycetemcomitans D11S-1 PTS system ascorbate-specific transporter subunit IIA YP_003255653.1 967225 R 668336 CDS YP_003255654.1 261867732 8536767 complement(967741..969513) 1 NC_013416.1 identified by Glimmer3; putative; PTS system ascorbate-specific transporter subunits IICB 969513 8536767 D11S_1048 Aggregatibacter actinomycetemcomitans D11S-1 PTS system ascorbate-specific transporter subunits IICB YP_003255654.1 967741 R 668336 CDS YP_003255655.1 261867733 8536768 969861..970952 1 NC_013416.1 identified by Glimmer3; putative; putative L-ascorbate 6-phosphate lactonase 970952 8536768 D11S_1049 Aggregatibacter actinomycetemcomitans D11S-1 putative L-ascorbate 6-phosphate lactonase YP_003255655.1 969861 D 668336 CDS YP_003255656.1 261867734 8536769 971044..971793 1 NC_013416.1 negative regulator of ulaG and ulaABCDEF; transcriptional repressor UlaR 971793 8536769 D11S_1050 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional repressor UlaR YP_003255656.1 971044 D 668336 CDS YP_003255657.1 261867735 8536770 971834..972694 1 NC_013416.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; putative L-xylulose 5-phosphate 3-epimerase 972694 8536770 D11S_1051 Aggregatibacter actinomycetemcomitans D11S-1 putative L-xylulose 5-phosphate 3-epimerase YP_003255657.1 971834 D 668336 CDS YP_003255658.1 261867736 8536771 972688..973383 1 NC_013416.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 973383 sgbE 8536771 sgbE Aggregatibacter actinomycetemcomitans D11S-1 L-ribulose-5-phosphate 4-epimerase YP_003255658.1 972688 D 668336 CDS YP_003255659.1 261867737 8536772 complement(973371..974681) 1 NC_013416.1 identified by Glimmer3; putative; tyrosine-specific transport protein 1 974681 8536772 D11S_1053 Aggregatibacter actinomycetemcomitans D11S-1 tyrosine-specific transport protein 1 YP_003255659.1 973371 R 668336 CDS YP_003255660.1 261867738 8536773 974795..974932 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 974932 8536773 D11S_1054 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255660.1 974795 D 668336 CDS YP_003255661.1 261867739 8536774 974943..975170 1 NC_013416.1 identified by Glimmer3; putative; LacZ protein 975170 8536774 D11S_1055 Aggregatibacter actinomycetemcomitans D11S-1 LacZ protein YP_003255661.1 974943 D 668336 CDS YP_003255662.1 261867740 8536775 complement(975425..975688) 1 NC_013416.1 identified by Glimmer3; putative; glutaredoxin, GrxA family 975688 8536775 D11S_1056 Aggregatibacter actinomycetemcomitans D11S-1 glutaredoxin, GrxA family YP_003255662.1 975425 R 668336 CDS YP_003255663.1 261867741 8536776 975815..976549 1 NC_013416.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A 976549 8536776 D11S_1057 Aggregatibacter actinomycetemcomitans D11S-1 nitroreductase A YP_003255663.1 975815 D 668336 CDS YP_003255664.1 261867742 8536777 976640..977473 1 NC_013416.1 identified by Glimmer3; putative; ribosomal protein S6 modification protein 977473 8536777 D11S_1058 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein S6 modification protein YP_003255664.1 976640 D 668336 CDS YP_003255665.1 261867743 8536778 977526..977717 1 NC_013416.1 identified by Glimmer3; putative; protein YcfP 977717 8536778 D11S_1059 Aggregatibacter actinomycetemcomitans D11S-1 protein YcfP YP_003255665.1 977526 D 668336 CDS YP_003255666.1 261867744 8536779 complement(977769..978374) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 978374 8536779 D11S_1060 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255666.1 977769 R 668336 CDS YP_003255667.1 261867745 8536780 complement(978478..979872) 1 NC_013416.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 979872 fumC 8536780 fumC Aggregatibacter actinomycetemcomitans D11S-1 fumarate hydratase YP_003255667.1 978478 R 668336 CDS YP_003255668.1 261867746 8536781 980082..980531 1 NC_013416.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 980531 8536781 D11S_1062 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit chi YP_003255668.1 980082 D 668336 CDS YP_003255669.1 261867747 8536782 980570..980698 1 NC_013416.1 identified by Glimmer3; putative; valyl-tRNA synthetase 980698 8536782 D11S_1063 Aggregatibacter actinomycetemcomitans D11S-1 valyl-tRNA synthetase YP_003255669.1 980570 D 668336 CDS YP_003255670.1 261867748 8536783 980726..980875 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 980875 8536783 D11S_1064 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255670.1 980726 D 668336 CDS YP_003255671.1 261867749 8536784 981227..981490 1 NC_013416.1 identified by Glimmer3; putative; adenylosuccinate synthetase 981490 8536784 D11S_1065 Aggregatibacter actinomycetemcomitans D11S-1 adenylosuccinate synthetase YP_003255671.1 981227 D 668336 CDS YP_003255672.1 261867750 8536785 981574..984438 1 NC_013416.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 984438 valS 8536785 valS Aggregatibacter actinomycetemcomitans D11S-1 valyl-tRNA synthetase YP_003255672.1 981574 D 668336 CDS YP_003255673.1 261867751 8536786 984505..985398 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 985398 8536786 D11S_1067 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255673.1 984505 D 668336 CDS YP_003255674.1 261867752 8536787 complement(985517..985633) 1 NC_013416.1 identified by Glimmer3; putative; protein HipA 985633 8536787 D11S_1068 Aggregatibacter actinomycetemcomitans D11S-1 protein HipA YP_003255674.1 985517 R 668336 CDS YP_003255675.1 261867753 8536788 complement(985627..985965) 1 NC_013416.1 identified by Glimmer3; putative; protein HipA 985965 8536788 D11S_1069 Aggregatibacter actinomycetemcomitans D11S-1 protein HipA YP_003255675.1 985627 R 668336 CDS YP_003255676.1 261867754 8536789 complement(986015..986296) 1 NC_013416.1 identified by Glimmer3; putative; HTH-type transcriptional regulator HipB 986296 8536789 D11S_1070 Aggregatibacter actinomycetemcomitans D11S-1 HTH-type transcriptional regulator HipB YP_003255676.1 986015 R 668336 CDS YP_003255677.1 261867755 8536790 complement(986440..987957) 1 NC_013416.1 identified by Glimmer3; putative; multidrug resistance protein B 987957 8536790 D11S_1071 Aggregatibacter actinomycetemcomitans D11S-1 multidrug resistance protein B YP_003255677.1 986440 R 668336 CDS YP_003255678.1 261867756 8536791 complement(987967..988698) 1 NC_013416.1 identified by Glimmer3; putative; multidrug resistance protein A 988698 8536791 D11S_1072 Aggregatibacter actinomycetemcomitans D11S-1 multidrug resistance protein A YP_003255678.1 987967 R 668336 CDS YP_003255679.1 261867757 8536792 complement(988763..989128) 1 NC_013416.1 identified by Glimmer3; putative; multidrug resistance protein A 989128 8536792 D11S_1073 Aggregatibacter actinomycetemcomitans D11S-1 multidrug resistance protein A YP_003255679.1 988763 R 668336 CDS YP_003255680.1 261867758 8536793 989337..989819 1 NC_013416.1 identified by Glimmer3; putative; DNA protection during starvation protein 989819 8536793 D11S_1074 Aggregatibacter actinomycetemcomitans D11S-1 DNA protection during starvation protein YP_003255680.1 989337 D 668336 CDS YP_003255681.1 261867759 8536794 complement(989938..991917) 1 NC_013416.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 991917 8536794 D11S_1075 Aggregatibacter actinomycetemcomitans D11S-1 exoribonuclease II YP_003255681.1 989938 R 668336 CDS YP_003255682.1 261867760 8536795 complement(991990..992778) 1 NC_013416.1 identified by Glimmer3; putative; enoyl-[acyl-carrier-protein] reductase 992778 8536795 D11S_1076 Aggregatibacter actinomycetemcomitans D11S-1 enoyl-[acyl-carrier-protein] reductase YP_003255682.1 991990 R 668336 CDS YP_003255683.1 261867761 8536796 complement(992869..993726) 1 NC_013416.1 identified by Glimmer3; putative; NIF3-like protein 993726 8536796 D11S_1077 Aggregatibacter actinomycetemcomitans D11S-1 NIF3-like protein YP_003255683.1 992869 R 668336 CDS YP_003255684.1 261867762 8536797 complement(993849..994478) 1 NC_013416.1 identified by Glimmer3; putative; NrdG protein 994478 8536797 D11S_1078 Aggregatibacter actinomycetemcomitans D11S-1 NrdG protein YP_003255684.1 993849 R 668336 CDS YP_003255685.1 261867763 8536798 complement(994484..994909) 1 NC_013416.1 identified by Glimmer3; putative; queuosine biosynthesis protein QueD 994909 8536798 D11S_1079 Aggregatibacter actinomycetemcomitans D11S-1 queuosine biosynthesis protein QueD YP_003255685.1 994484 R 668336 CDS YP_003255686.1 261867764 8536799 complement(995099..996607) 1 NC_013416.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 996607 lysS 8536799 lysS Aggregatibacter actinomycetemcomitans D11S-1 lysyl-tRNA synthetase YP_003255686.1 995099 R 668336 CDS YP_003255687.1 261867765 8536800 complement(996664..997566) 1 NC_013416.1 identified by Glimmer3; putative; peptide chain release factor 2 997566 8536800 D11S_1081 Aggregatibacter actinomycetemcomitans D11S-1 peptide chain release factor 2 YP_003255687.1 996664 R 668336 CDS YP_003255688.1 261867766 8536801 complement(997685..997846) 1 NC_013416.1 identified by Glimmer3; putative; peptide chain release factor 2 (RF-2) 997846 8536801 D11S_1082 Aggregatibacter actinomycetemcomitans D11S-1 peptide chain release factor 2 (RF-2) YP_003255688.1 997685 R 668336 CDS YP_003255689.1 261867767 8536802 997930..998613 1 NC_013416.1 identified by Glimmer3; putative; thiol:disulfide interchange protein DsbC 998613 8536802 D11S_1083 Aggregatibacter actinomycetemcomitans D11S-1 thiol:disulfide interchange protein DsbC YP_003255689.1 997930 D 668336 CDS YP_003255690.1 261867768 8536803 998626..1000347 1 NC_013416.1 identified by Glimmer3; putative; single-stranded-DNA-specific exonuclease RecJ 1000347 8536803 D11S_1084 Aggregatibacter actinomycetemcomitans D11S-1 single-stranded-DNA-specific exonuclease RecJ YP_003255690.1 998626 D 668336 CDS YP_003255691.1 261867769 8536804 1000380..1001027 1 NC_013416.1 identified by Glimmer3; putative; thiol-disulfide interchange protein 1001027 8536804 D11S_1085 Aggregatibacter actinomycetemcomitans D11S-1 thiol-disulfide interchange protein YP_003255691.1 1000380 D 668336 CDS YP_003255692.1 261867770 8536805 1001044..1001736 1 NC_013416.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1001736 8536805 D11S_1086 Aggregatibacter actinomycetemcomitans D11S-1 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_003255692.1 1001044 D 668336 CDS YP_003255693.1 261867771 8536806 1001915..1002610 1 NC_013416.1 identified by Glimmer3; putative; putative periplasmic binding protein CbiK 1002610 8536806 D11S_1087 Aggregatibacter actinomycetemcomitans D11S-1 putative periplasmic binding protein CbiK YP_003255693.1 1001915 D 668336 CDS YP_003255694.1 261867772 8536807 1002617..1003120 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L25 1003120 8536807 D11S_1088 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L25 YP_003255694.1 1002617 D 668336 CDS YP_003255695.1 261867773 8536808 1003120..1003773 1 NC_013416.1 catalyzes the ATP-dependent transport of cobalt; cobalt transport protein CbiM 1003773 8536808 D11S_1089 Aggregatibacter actinomycetemcomitans D11S-1 cobalt transport protein CbiM YP_003255695.1 1003120 D 668336 CDS YP_003255696.1 261867774 8536809 1003770..1004435 1 NC_013416.1 identified by Glimmer3; putative; cobalt membrane transport protein CbiQ 1004435 8536809 D11S_1090 Aggregatibacter actinomycetemcomitans D11S-1 cobalt membrane transport protein CbiQ YP_003255696.1 1003770 D 668336 CDS YP_003255697.1 261867775 8536810 1004432..1005055 1 NC_013416.1 identified by Glimmer3; putative; cobalt transport ATP-binding protein CbiO 1005055 8536810 D11S_1091 Aggregatibacter actinomycetemcomitans D11S-1 cobalt transport ATP-binding protein CbiO YP_003255697.1 1004432 D 668336 CDS YP_003255698.1 261867776 8536811 1005134..1005943 1 NC_013416.1 GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 1005943 8536811 D11S_1092 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase nickel incorporation protein HypB YP_003255698.1 1005134 D 668336 CDS YP_003255699.1 261867777 8536812 1005970..1007082 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase expression/formation protein HypD 1007082 8536812 D11S_1093 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase expression/formation protein HypD YP_003255699.1 1005970 D 668336 CDS YP_003255700.1 261867778 8536813 1007082..1008095 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase expression/formation protein HypE 1008095 8536813 D11S_1094 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase expression/formation protein HypE YP_003255700.1 1007082 D 668336 CDS YP_003255701.1 261867779 8536814 1008117..1008269 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1008269 8536814 D11S_1095 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255701.1 1008117 D 668336 CDS YP_003255702.1 261867780 8536815 complement(1010059..1010874) 1 NC_013416.1 catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1010874 8536815 D11S_1096 Aggregatibacter actinomycetemcomitans D11S-1 shikimate 5-dehydrogenase YP_003255702.1 1010059 R 668336 CDS YP_003255703.1 261867781 8536816 complement(1011024..1011908) 1 NC_013416.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 1011908 metF 8536816 metF Aggregatibacter actinomycetemcomitans D11S-1 5,10-methylenetetrahydrofolate reductase YP_003255703.1 1011024 R 668336 CDS YP_003255704.1 261867782 8536817 complement(1012083..1013150) 1 NC_013416.1 identified by Glimmer3; putative; permease 1013150 8536817 D11S_1098 Aggregatibacter actinomycetemcomitans D11S-1 permease YP_003255704.1 1012083 R 668336 CDS YP_003255705.1 261867783 8536818 complement(1013155..1014273) 1 NC_013416.1 identified by Glimmer3; putative; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 1014273 8536818 D11S_1099 Aggregatibacter actinomycetemcomitans D11S-1 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_003255705.1 1013155 R 668336 CDS YP_003255706.1 261867784 8536819 1014410..1015900 1 NC_013416.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1015900 8536819 D11S_1100 Aggregatibacter actinomycetemcomitans D11S-1 leucyl aminopeptidase YP_003255706.1 1014410 D 668336 CDS YP_003255707.1 261867785 8536820 complement(1016045..1017106) 1 NC_013416.1 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1017106 modC 8536820 modC Aggregatibacter actinomycetemcomitans D11S-1 molybdate transporter ATP-binding protein YP_003255707.1 1016045 R 668336 CDS YP_003255708.1 261867786 8536821 complement(1017093..1017821) 1 NC_013416.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1017821 modB 8536821 modB Aggregatibacter actinomycetemcomitans D11S-1 molybdate ABC transporter permease YP_003255708.1 1017093 R 668336 CDS YP_003255709.1 261867787 8536822 complement(1017899..1018663) 1 NC_013416.1 identified by Glimmer3; putative; molybdate ABC transporter periplasmic molybdate-binding protein 1018663 8536822 D11S_1103 Aggregatibacter actinomycetemcomitans D11S-1 molybdate ABC transporter periplasmic molybdate-binding protein YP_003255709.1 1017899 R 668336 CDS YP_003255710.1 261867788 8536823 1018890..1019669 1 NC_013416.1 identified by Glimmer3; putative; ModE 1019669 8536823 D11S_1104 Aggregatibacter actinomycetemcomitans D11S-1 ModE YP_003255710.1 1018890 D 668336 CDS YP_003255711.1 261867789 8536824 1019890..1021233 1 NC_013416.1 identified by Glimmer3; putative; CitT protein 1021233 8536824 D11S_1105 Aggregatibacter actinomycetemcomitans D11S-1 CitT protein YP_003255711.1 1019890 D 668336 CDS YP_003255712.1 261867790 8536825 complement(1021300..1021896) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1021896 8536825 D11S_1106 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255712.1 1021300 R 668336 CDS YP_003255713.1 261867791 8536826 complement(1021905..1022933) 1 NC_013416.1 identified by Glimmer3; putative; periplasmic serine peptidase DegS 1022933 8536826 D11S_1107 Aggregatibacter actinomycetemcomitans D11S-1 periplasmic serine peptidase DegS YP_003255713.1 1021905 R 668336 CDS YP_003255714.1 261867792 8536827 complement(1022942..1024066) 1 NC_013416.1 identified by Glimmer3; putative; riboflavin biosynthesis protein RibD 1024066 8536827 D11S_1108 Aggregatibacter actinomycetemcomitans D11S-1 riboflavin biosynthesis protein RibD YP_003255714.1 1022942 R 668336 CDS YP_003255715.1 261867793 8536828 complement(1024066..1024518) 1 NC_013416.1 identified by Glimmer3; putative; transcriptional regulator NrdR 1024518 nrdR 8536828 nrdR Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulator NrdR YP_003255715.1 1024066 R 668336 CDS YP_003255716.1 261867794 8536829 complement(1024635..1025696) 1 NC_013416.1 identified by Glimmer3; putative; putative RNA 2'-O-ribose methyltransferase 1025696 8536829 D11S_1110 Aggregatibacter actinomycetemcomitans D11S-1 putative RNA 2'-O-ribose methyltransferase YP_003255716.1 1024635 R 668336 CDS YP_003255717.1 261867795 8536830 complement(1025716..1026621) 1 NC_013416.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 1026621 8536830 D11S_1111 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional activator GcvA YP_003255717.1 1025716 R 668336 CDS YP_003255718.1 261867796 8536831 1027083..1028102 1 NC_013416.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1028102 8536831 D11S_1112 Aggregatibacter actinomycetemcomitans D11S-1 branched-chain amino acid aminotransferase YP_003255718.1 1027083 D 668336 CDS YP_003255719.1 261867797 8536832 1028470..1029210 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1029210 8536832 D11S_1113 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255719.1 1028470 D 668336 CDS YP_003255720.1 261867798 8536833 complement(1029366..1030301) 1 NC_013416.1 oxidizes malate to oxaloacetate; malate dehydrogenase 1030301 8536833 D11S_1114 Aggregatibacter actinomycetemcomitans D11S-1 malate dehydrogenase YP_003255720.1 1029366 R 668336 CDS YP_003255721.1 261867799 8536834 1030557..1031024 1 NC_013416.1 identified by Glimmer3; putative; arginine repressor 1031024 8536834 D11S_1115 Aggregatibacter actinomycetemcomitans D11S-1 arginine repressor YP_003255721.1 1030557 D 668336 CDS YP_003255722.1 261867800 8536835 1031048..1031935 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1031935 8536835 D11S_1116 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255722.1 1031048 D 668336 CDS YP_003255723.1 261867801 8536836 1032126..1032707 1 NC_013416.1 identified by Glimmer3; putative; Na(+)-translocating NADH-quinone reductase subunit E 1032707 8536836 D11S_1117 Aggregatibacter actinomycetemcomitans D11S-1 Na(+)-translocating NADH-quinone reductase subunit E YP_003255723.1 1032126 D 668336 CDS YP_003255724.1 261867802 8536837 1032707..1033297 1 NC_013416.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 1033297 8536837 D11S_1118 Aggregatibacter actinomycetemcomitans D11S-1 electron transport complex protein RnfB YP_003255724.1 1032707 D 668336 CDS YP_003255725.1 261867803 8536838 1033298..1035535 1 NC_013416.1 identified by Glimmer3; putative; electron transport complex protein RnfC 1035535 8536838 D11S_1119 Aggregatibacter actinomycetemcomitans D11S-1 electron transport complex protein RnfC YP_003255725.1 1033298 D 668336 CDS YP_003255726.1 261867804 8536839 1035546..1036625 1 NC_013416.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 1036625 rnfD 8536839 rnfD Aggregatibacter actinomycetemcomitans D11S-1 electron transport complex protein RnfD YP_003255726.1 1035546 D 668336 CDS YP_003255727.1 261867805 8536840 1036632..1037252 1 NC_013416.1 identified by Glimmer3; putative; electron transport complex protein RnfG 1037252 8536840 D11S_1121 Aggregatibacter actinomycetemcomitans D11S-1 electron transport complex protein RnfG YP_003255727.1 1036632 D 668336 CDS YP_003255728.1 261867806 8536841 1037245..1038030 1 NC_013416.1 identified by Glimmer3; putative; electron transport complex protein RnfE 1038030 8536841 D11S_1122 Aggregatibacter actinomycetemcomitans D11S-1 electron transport complex protein RnfE YP_003255728.1 1037245 D 668336 CDS YP_003255729.1 261867807 8536842 1038177..1038812 1 NC_013416.1 identified by Glimmer3; putative; endonuclease III 1038812 8536842 D11S_1123 Aggregatibacter actinomycetemcomitans D11S-1 endonuclease III YP_003255729.1 1038177 D 668336 CDS YP_003255730.1 261867808 8536843 1038837..1040204 1 NC_013416.1 identified by Glimmer3; putative; SoxR-reducing system protein RsxE 1040204 8536843 D11S_1124 Aggregatibacter actinomycetemcomitans D11S-1 SoxR-reducing system protein RsxE YP_003255730.1 1038837 D 668336 CDS YP_003255731.1 261867809 8536844 complement(1040599..1041384) 1 NC_013416.1 identified by Glimmer3; putative; high-affinity zinc uptake system membrane protein ZnuB 1041384 8536844 D11S_1125 Aggregatibacter actinomycetemcomitans D11S-1 high-affinity zinc uptake system membrane protein ZnuB YP_003255731.1 1040599 R 668336 CDS YP_003255732.1 261867810 8536845 complement(1041396..1042169) 1 NC_013416.1 identified by Glimmer3; putative; zinc import ATP-binding protein ZnuC 1042169 8536845 D11S_1126 Aggregatibacter actinomycetemcomitans D11S-1 zinc import ATP-binding protein ZnuC YP_003255732.1 1041396 R 668336 CDS YP_003255733.1 261867811 8536846 1042358..1043890 1 NC_013416.1 identified by Glimmer3; putative; NlpD protein 1043890 8536846 D11S_1127 Aggregatibacter actinomycetemcomitans D11S-1 NlpD protein YP_003255733.1 1042358 D 668336 CDS YP_003255734.1 261867812 8536847 complement(1043998..1044756) 1 NC_013416.1 identified by Glimmer3; putative; iron(III) dicitrate transport ATP-binding protein FecE 1044756 8536847 D11S_1128 Aggregatibacter actinomycetemcomitans D11S-1 iron(III) dicitrate transport ATP-binding protein FecE YP_003255734.1 1043998 R 668336 CDS YP_003255735.1 261867813 8536848 complement(1044768..1045691) 1 NC_013416.1 identified by Glimmer3; putative; iron(III) transport system permease 1045691 8536848 D11S_1129 Aggregatibacter actinomycetemcomitans D11S-1 iron(III) transport system permease YP_003255735.1 1044768 R 668336 CDS YP_003255736.1 261867814 8536849 complement(1045699..1046664) 1 NC_013416.1 identified by Glimmer3; putative; ABC transport system permease 1046664 8536849 D11S_1130 Aggregatibacter actinomycetemcomitans D11S-1 ABC transport system permease YP_003255736.1 1045699 R 668336 CDS YP_003255737.1 261867815 8536850 complement(1046724..1047623) 1 NC_013416.1 identified by Glimmer3; putative; ABC transport system periplasmic protein 1047623 8536850 D11S_1131 Aggregatibacter actinomycetemcomitans D11S-1 ABC transport system periplasmic protein YP_003255737.1 1046724 R 668336 CDS YP_003255738.1 261867816 8536851 1047830..1049806 1 NC_013416.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 1049806 cpdB 8536851 cpdB Aggregatibacter actinomycetemcomitans D11S-1 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_003255738.1 1047830 D 668336 CDS YP_003255739.1 261867817 8536852 complement(1049880..1050740) 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase accessory protein FdhE 1050740 8536852 D11S_1133 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase accessory protein FdhE YP_003255739.1 1049880 R 668336 CDS YP_003255740.1 261867818 8536853 complement(1050906..1051040) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1051040 8536853 D11S_1134 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255740.1 1050906 R 668336 CDS YP_003255741.1 261867819 8536854 1051165..1051581 1 NC_013416.1 identified by Glimmer3; putative; protein YgiW 1051581 8536854 D11S_1135 Aggregatibacter actinomycetemcomitans D11S-1 protein YgiW YP_003255741.1 1051165 D 668336 CDS YP_003255742.1 261867820 8536855 1051719..1052390 1 NC_013416.1 identified by Glimmer3; putative; transcriptional regulatory protein QseB 1052390 8536855 D11S_1136 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulatory protein QseB YP_003255742.1 1051719 D 668336 CDS YP_003255743.1 261867821 8536856 1052377..1053753 1 NC_013416.1 identified by Glimmer3; putative; sensor protein QseC 1053753 8536856 D11S_1137 Aggregatibacter actinomycetemcomitans D11S-1 sensor protein QseC YP_003255743.1 1052377 D 668336 CDS YP_003255744.1 261867822 8536857 complement(1053879..1055648) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1055648 8536857 D11S_1138 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255744.1 1053879 R 668336 CDS YP_003255745.1 261867823 8536858 complement(1055881..1056126) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1056126 8536858 D11S_1139 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255745.1 1055881 R 668336 CDS YP_003255746.1 261867824 8536859 complement(1056320..1057657) 1 NC_013416.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 1057657 8536859 D11S_1140 Aggregatibacter actinomycetemcomitans D11S-1 argininosuccinate synthase YP_003255746.1 1056320 R 668336 CDS YP_003255747.1 261867825 8536860 complement(1057752..1058579) 1 NC_013416.1 identified by Glimmer3; putative; WcaG protein 1058579 8536860 D11S_1141 Aggregatibacter actinomycetemcomitans D11S-1 WcaG protein YP_003255747.1 1057752 R 668336 CDS YP_003255748.1 261867826 8536861 complement(1058750..1058866) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1058866 8536861 D11S_1142 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255748.1 1058750 R 668336 CDS YP_003255749.1 261867827 8536862 1058936..1060519 1 NC_013416.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 1060519 prfC 8536862 prfC Aggregatibacter actinomycetemcomitans D11S-1 peptide chain release factor 3 YP_003255749.1 1058936 D 668336 CDS YP_003255750.1 261867828 8536863 1060706..1061056 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1061056 8536863 D11S_1144 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255750.1 1060706 D 668336 CDS YP_003255751.1 261867829 8536864 1061053..1061352 1 NC_013416.1 identified by Glimmer3; putative; putative transcriptional regulator 1061352 8536864 D11S_1145 Aggregatibacter actinomycetemcomitans D11S-1 putative transcriptional regulator YP_003255751.1 1061053 D 668336 CDS YP_003255752.1 261867830 8536865 complement(1061388..1064321) 1 NC_013416.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1064321 8536865 D11S_1146 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_003255752.1 1061388 R 668336 CDS YP_003255753.1 261867831 8536866 1064743..1067049 1 NC_013416.1 identified by Glimmer3; putative; CRISPR-associated helicase Cas3 1067049 8536866 D11S_1147 Aggregatibacter actinomycetemcomitans D11S-1 CRISPR-associated helicase Cas3 YP_003255753.1 1064743 D 668336 CDS YP_003255754.1 261867832 8536867 1067555..1068061 1 NC_013416.1 identified by Glimmer3; putative; CRISPR-associated protein Cas4 1068061 8536867 D11S_1148 Aggregatibacter actinomycetemcomitans D11S-1 CRISPR-associated protein Cas4 YP_003255754.1 1067555 D 668336 CDS YP_003255755.1 261867833 8536868 1068051..1069805 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent OLD family endonuclease 1069805 8536868 D11S_1149 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent OLD family endonuclease YP_003255755.1 1068051 D 668336 CDS YP_003255756.1 261867834 8536869 1069859..1070872 1 NC_013416.1 identified by Glimmer3; putative; CRISPR-associated protein Cas1 1070872 8536869 D11S_1150 Aggregatibacter actinomycetemcomitans D11S-1 CRISPR-associated protein Cas1 YP_003255756.1 1069859 D 668336 CDS YP_003255757.1 261867835 8536870 1070876..1071169 1 NC_013416.1 identified by Glimmer3; putative; CRISPR-associated protein Cas2 1071169 8536870 D11S_1151 Aggregatibacter actinomycetemcomitans D11S-1 CRISPR-associated protein Cas2 YP_003255757.1 1070876 D 668336 CDS YP_003255758.1 261867836 8536871 1071794..1072174 1 NC_013416.1 identified by Glimmer3; putative; phosphomethylpyrimidine kinase 1072174 8536871 D11S_1152 Aggregatibacter actinomycetemcomitans D11S-1 phosphomethylpyrimidine kinase YP_003255758.1 1071794 D 668336 CDS YP_003255759.1 261867837 8536872 1072196..1073200 1 NC_013416.1 identified by Glimmer3; putative; thiamin/thiamin pyrophosphate ABC transporter 1073200 8536872 D11S_1153 Aggregatibacter actinomycetemcomitans D11S-1 thiamin/thiamin pyrophosphate ABC transporter YP_003255759.1 1072196 D 668336 CDS YP_003255760.1 261867838 8536873 1073266..1074837 1 NC_013416.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 1074837 thiP 8536873 thiP Aggregatibacter actinomycetemcomitans D11S-1 thiamine transporter membrane protein YP_003255760.1 1073266 D 668336 CDS YP_003255761.1 261867839 8536874 1074821..1075468 1 NC_013416.1 identified by Glimmer3; putative; thiamine ABC transporter ATP-binding protein 1075468 8536874 D11S_1155 Aggregatibacter actinomycetemcomitans D11S-1 thiamine ABC transporter ATP-binding protein YP_003255761.1 1074821 D 668336 CDS YP_003255762.1 261867840 8536875 1075513..1076517 1 NC_013416.1 identified by Glimmer3; putative; biotin synthase 1076517 8536875 D11S_1156 Aggregatibacter actinomycetemcomitans D11S-1 biotin synthase YP_003255762.1 1075513 D 668336 CDS YP_003255763.1 261867841 8536876 complement(1076615..1077997) 1 NC_013416.1 identified by Glimmer3; putative; protease DegQ 1077997 8536876 D11S_1157 Aggregatibacter actinomycetemcomitans D11S-1 protease DegQ YP_003255763.1 1076615 R 668336 CDS YP_003255764.1 261867842 8536877 1078060..1078230 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1078230 8536877 D11S_1158 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255764.1 1078060 D 668336 CDS YP_003255765.1 261867843 8536878 complement(1078188..1078598) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1078598 8536878 D11S_1159 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255765.1 1078188 R 668336 CDS YP_003255766.1 261867844 8536879 complement(1078768..1080531) 1 NC_013416.1 identified by Glimmer3; putative; protein YcaO 1080531 8536879 D11S_1160 Aggregatibacter actinomycetemcomitans D11S-1 protein YcaO YP_003255766.1 1078768 R 668336 CDS YP_003255767.1 261867845 8536880 complement(1080622..1081827) 1 NC_013416.1 identified by Glimmer3; putative; mannose-6-phosphate isomerase, class I 1081827 8536880 D11S_1161 Aggregatibacter actinomycetemcomitans D11S-1 mannose-6-phosphate isomerase, class I YP_003255767.1 1080622 R 668336 CDS YP_003255768.1 261867846 8536881 1082003..1082341 1 NC_013416.1 identified by Glimmer3; putative; protein YegP 1082341 8536881 D11S_1162 Aggregatibacter actinomycetemcomitans D11S-1 protein YegP YP_003255768.1 1082003 D 668336 CDS YP_003255769.1 261867847 8536882 1082530..1084023 1 NC_013416.1 identified by Glimmer3; putative; PTS system maltose and glucose-specific transporter subunit IIBC 1084023 8536882 D11S_1163 Aggregatibacter actinomycetemcomitans D11S-1 PTS system maltose and glucose-specific transporter subunit IIBC YP_003255769.1 1082530 D 668336 CDS YP_003255770.1 261867848 8536883 complement(1084081..1084779) 1 NC_013416.1 identified by Glimmer3; putative; SmtA protein 1084779 8536883 D11S_1164 Aggregatibacter actinomycetemcomitans D11S-1 SmtA protein YP_003255770.1 1084081 R 668336 CDS YP_003255771.1 261867849 8536884 1084800..1085501 1 NC_013416.1 identified by Glimmer3; putative; hydroxyacylglutathione hydrolase 1085501 8536884 D11S_1165 Aggregatibacter actinomycetemcomitans D11S-1 hydroxyacylglutathione hydrolase YP_003255771.1 1084800 D 668336 CDS YP_003255772.1 261867850 8536885 1085686..1086990 1 NC_013416.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1086990 hemA 8536885 hemA Aggregatibacter actinomycetemcomitans D11S-1 glutamyl-tRNA reductase YP_003255772.1 1085686 D 668336 CDS YP_003255773.1 261867851 8536886 1087052..1088275 1 NC_013416.1 identified by Glimmer3; putative; protein mlc 1088275 8536886 D11S_1167 Aggregatibacter actinomycetemcomitans D11S-1 protein mlc YP_003255773.1 1087052 D 668336 CDS YP_003255774.1 261867852 8536891 complement(1089012..1089656) 1 NC_013416.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1089656 adk 8536891 adk Aggregatibacter actinomycetemcomitans D11S-1 adenylate kinase YP_003255774.1 1089012 R 668336 CDS YP_003255775.1 261867853 8536892 complement(1089789..1091078) 1 NC_013416.1 identified by Glimmer3; putative; AmpG protein 1091078 8536892 D11S_1173 Aggregatibacter actinomycetemcomitans D11S-1 AmpG protein YP_003255775.1 1089789 R 668336 CDS YP_003255776.1 261867854 8536893 complement(1091085..1091426) 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase nickel insertion protein HypA 1091426 8536893 D11S_1174 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase nickel insertion protein HypA YP_003255776.1 1091085 R 668336 CDS YP_003255777.1 261867855 8536894 complement(1091432..1092448) 1 NC_013416.1 identified by Glimmer3; putative; UDP-glucose 4-epimerase 1092448 8536894 D11S_1175 Aggregatibacter actinomycetemcomitans D11S-1 UDP-glucose 4-epimerase YP_003255777.1 1091432 R 668336 CDS YP_003255778.1 261867856 8536895 1092642..1093028 1 NC_013416.1 identified by Glimmer3; putative; aminopeptidase C 1093028 8536895 D11S_1176 Aggregatibacter actinomycetemcomitans D11S-1 aminopeptidase C YP_003255778.1 1092642 D 668336 CDS YP_003255779.1 261867857 8536896 1093153..1094094 1 NC_013416.1 identified by Glimmer3; putative; cystathionine beta-lyase 1094094 8536896 D11S_1177 Aggregatibacter actinomycetemcomitans D11S-1 cystathionine beta-lyase YP_003255779.1 1093153 D 668336 CDS YP_003255780.1 261867858 8536897 1094048..1094173 1 NC_013416.1 identified by Glimmer3; putative; uridine kinase 1094173 8536897 D11S_1178 Aggregatibacter actinomycetemcomitans D11S-1 uridine kinase YP_003255780.1 1094048 D 668336 CDS YP_003255781.1 261867859 8536898 complement(1094201..1095547) 1 NC_013416.1 identified by Glimmer3; putative; tRNA(Ile)-lysidine synthase 1095547 8536898 D11S_1179 Aggregatibacter actinomycetemcomitans D11S-1 tRNA(Ile)-lysidine synthase YP_003255781.1 1094201 R 668336 CDS YP_003255782.1 261867860 8536899 complement(1095579..1096436) 1 NC_013416.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 1096436 8536899 D11S_1180 Aggregatibacter actinomycetemcomitans D11S-1 pyridoxamine kinase YP_003255782.1 1095579 R 668336 CDS YP_003255783.1 261867861 8536900 complement(1096499..1097452) 1 NC_013416.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1097452 8536900 D11S_1181 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_003255783.1 1096499 R 668336 CDS YP_003255784.1 261867862 8536901 1099234..1100184 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1100184 8536901 D11S_1182 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255784.1 1099234 D 668336 CDS YP_003255785.1 261867863 8536902 complement(1100685..1100861) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1100861 8536902 D11S_1183 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255785.1 1100685 R 668336 CDS YP_003255786.1 261867864 8536903 complement(1101490..1101714) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1101714 8536903 D11S_1184 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255786.1 1101490 R 668336 CDS YP_003255787.1 261867865 8536904 complement(1101779..1102135) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1102135 8536904 D11S_1185 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255787.1 1101779 R 668336 CDS YP_003255788.1 261867866 8536905 1102219..1102578 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1102578 8536905 D11S_1186 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255788.1 1102219 D 668336 CDS YP_003255789.1 261867867 8536906 complement(1102604..1103023) 1 NC_013416.1 identified by Glimmer3; putative; putative bacteriophage protein transcription regulator 1103023 8536906 D11S_1187 Aggregatibacter actinomycetemcomitans D11S-1 putative bacteriophage protein transcription regulator YP_003255789.1 1102604 R 668336 CDS YP_003255790.1 261867868 8536907 1103510..1104661 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1104661 8536907 D11S_1188 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255790.1 1103510 D 668336 CDS YP_003255791.1 261867869 8536908 1104633..1104761 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1104761 8536908 D11S_1189 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255791.1 1104633 D 668336 CDS YP_003255792.1 261867870 8536909 1104972..1106210 1 NC_013416.1 identified by Glimmer3; putative; putative antirepressor protein 1106210 8536909 D11S_1190 Aggregatibacter actinomycetemcomitans D11S-1 putative antirepressor protein YP_003255792.1 1104972 D 668336 CDS YP_003255793.1 261867871 8536910 1106210..1106821 1 NC_013416.1 identified by Glimmer3; putative; putative tail fiber assembly protein 1106821 8536910 D11S_1191 Aggregatibacter actinomycetemcomitans D11S-1 putative tail fiber assembly protein YP_003255793.1 1106210 D 668336 CDS YP_003255794.1 261867872 8536911 complement(1106818..1107576) 1 NC_013416.1 identified by Glimmer3; putative; putative integrase 1107576 8536911 D11S_1192 Aggregatibacter actinomycetemcomitans D11S-1 putative integrase YP_003255794.1 1106818 R 668336 CDS YP_003255795.1 261867873 8536912 complement(1107757..1109316) 1 NC_013416.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1109316 guaA 8536912 guaA Aggregatibacter actinomycetemcomitans D11S-1 GMP synthase YP_003255795.1 1107757 R 668336 CDS YP_003255796.1 261867874 8536913 complement(1109348..1109614) 1 NC_013416.1 identified by Glimmer3; putative; addiction module antitoxin 1109614 8536913 D11S_1194 Aggregatibacter actinomycetemcomitans D11S-1 addiction module antitoxin YP_003255796.1 1109348 R 668336 CDS YP_003255797.1 261867875 8536914 complement(1109626..1109898) 1 NC_013416.1 identified by Glimmer3; putative; putative RelB protein 1109898 8536914 D11S_1195 Aggregatibacter actinomycetemcomitans D11S-1 putative RelB protein YP_003255797.1 1109626 R 668336 CDS YP_003255798.1 261867876 8536915 complement(1109938..1110123) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1110123 8536915 D11S_1196 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255798.1 1109938 R 668336 CDS YP_003255799.1 261867877 8536916 complement(1110153..1111505) 1 NC_013416.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1111505 dcuC 8536916 dcuC Aggregatibacter actinomycetemcomitans D11S-1 C4-dicarboxylate transporter DcuC YP_003255799.1 1110153 R 668336 CDS YP_003255800.1 261867878 8536918 1111944..1112399 1 NC_013416.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1112399 8536918 D11S_1199 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255800.1 1111944 D 668336 CDS YP_003255801.1 261867879 8536919 1112423..1113919 1 NC_013416.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1113919 nusA 8536919 nusA Aggregatibacter actinomycetemcomitans D11S-1 transcription elongation factor NusA YP_003255801.1 1112423 D 668336 CDS YP_003255802.1 261867880 8536920 1113935..1116424 1 NC_013416.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1116424 infB 8536920 infB Aggregatibacter actinomycetemcomitans D11S-1 translation initiation factor IF-2 YP_003255802.1 1113935 D 668336 CDS YP_003255803.1 261867881 8536921 1116956..1117342 1 NC_013416.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1117342 rbfA 8536921 rbfA Aggregatibacter actinomycetemcomitans D11S-1 ribosome-binding factor A YP_003255803.1 1116956 D 668336 CDS YP_003255804.1 261867882 8536922 1117342..1118259 1 NC_013416.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1118259 truB 8536922 truB Aggregatibacter actinomycetemcomitans D11S-1 tRNA pseudouridine synthase B YP_003255804.1 1117342 D 668336 CDS YP_003255805.1 261867883 8536923 complement(1118301..1118453) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1118453 8536923 D11S_1204 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255805.1 1118301 R 668336 CDS YP_003255806.1 261867884 8536924 complement(1118656..1119159) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1119159 8536924 D11S_1205 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255806.1 1118656 R 668336 CDS YP_003255807.1 261867885 8536925 complement(1119286..1120473) 1 NC_013416.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1120473 8536925 D11S_1206 Aggregatibacter actinomycetemcomitans D11S-1 tyrosyl-tRNA synthetase YP_003255807.1 1119286 R 668336 CDS YP_003255808.1 261867886 8536926 complement(1120721..1121446) 1 NC_013416.1 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 1121446 8536926 D11S_1207 Aggregatibacter actinomycetemcomitans D11S-1 sugar fermentation stimulation protein A YP_003255808.1 1120721 R 668336 CDS YP_003255809.1 261867887 8536927 1121741..1123276 1 NC_013416.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 1123276 pntA 8536927 pntA Aggregatibacter actinomycetemcomitans D11S-1 NAD(P) transhydrogenase subunit alpha YP_003255809.1 1121741 D 668336 CDS YP_003255810.1 261867888 8536928 1123287..1124711 1 NC_013416.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 1124711 pntB 8536928 pntB Aggregatibacter actinomycetemcomitans D11S-1 pyridine nucleotide transhydrogenase YP_003255810.1 1123287 D 668336 CDS YP_003255811.1 261867889 8536929 1124892..1125134 1 NC_013416.1 identified by Glimmer3; putative; putative DNA repair ATPase 1125134 8536929 D11S_1210 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA repair ATPase YP_003255811.1 1124892 D 668336 CDS YP_003255812.1 261867890 8536930 complement(1125105..1125266) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1125266 8536930 D11S_1211 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255812.1 1125105 R 668336 CDS YP_003255813.1 261867891 8536931 1125735..1126583 1 NC_013416.1 identified by Glimmer3; putative; filamentation induced by cAMP protein Fic-like protein 1126583 8536931 D11S_1212 Aggregatibacter actinomycetemcomitans D11S-1 filamentation induced by cAMP protein Fic-like protein YP_003255813.1 1125735 D 668336 CDS YP_003255814.1 261867892 8536932 1127125..1128204 1 NC_013416.1 identified by Glimmer3; putative; selenide, water dikinase 1128204 8536932 D11S_1213 Aggregatibacter actinomycetemcomitans D11S-1 selenide, water dikinase YP_003255814.1 1127125 D 668336 CDS YP_003255815.1 261867893 8536933 1128442..1129512 1 NC_013416.1 identified by Glimmer3; putative; spermidine/putrescine import ATP-binding protein PotA 1129512 8536933 D11S_1214 Aggregatibacter actinomycetemcomitans D11S-1 spermidine/putrescine import ATP-binding protein PotA YP_003255815.1 1128442 D 668336 CDS YP_003255816.1 261867894 8536934 1129509..1130378 1 NC_013416.1 identified by Glimmer3; putative; PotB protein 1130378 8536934 D11S_1215 Aggregatibacter actinomycetemcomitans D11S-1 PotB protein YP_003255816.1 1129509 D 668336 CDS YP_003255817.1 261867895 8536935 1130375..1131223 1 NC_013416.1 identified by Glimmer3; putative; PotC protein 1131223 8536935 D11S_1216 Aggregatibacter actinomycetemcomitans D11S-1 PotC protein YP_003255817.1 1130375 D 668336 CDS YP_003255818.1 261867896 8536936 1131243..1132334 1 NC_013416.1 identified by Glimmer3; putative; PotD protein 1132334 8536936 D11S_1217 Aggregatibacter actinomycetemcomitans D11S-1 PotD protein YP_003255818.1 1131243 D 668336 CDS YP_003255819.1 261867897 8536937 complement(1132719..1134548) 1 NC_013416.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1134548 uvrC 8536937 uvrC Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ABC subunit C YP_003255819.1 1132719 R 668336 CDS YP_003255820.1 261867898 8536938 complement(1134687..1135460) 1 NC_013416.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 1135460 8536938 D11S_1219 Aggregatibacter actinomycetemcomitans D11S-1 3-deoxy-manno-octulosonate cytidylyltransferase YP_003255820.1 1134687 R 668336 CDS YP_003255821.1 261867899 8536939 complement(1135462..1135641) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1135641 8536939 D11S_1220 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255821.1 1135462 R 668336 CDS YP_003255822.1 261867900 8536940 complement(1135663..1136637) 1 NC_013416.1 identified by Glimmer3; putative; tetraacyldisaccharide 4'-kinase 1136637 8536940 D11S_1221 Aggregatibacter actinomycetemcomitans D11S-1 tetraacyldisaccharide 4'-kinase YP_003255822.1 1135663 R 668336 CDS YP_003255823.1 261867901 8536941 complement(1136656..1138404) 1 NC_013416.1 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding/permease 1138404 8536941 D11S_1222 Aggregatibacter actinomycetemcomitans D11S-1 lipid transporter ATP-binding/permease YP_003255823.1 1136656 R 668336 CDS YP_003255824.1 261867902 8536942 complement(1138451..1140685) 1 NC_013416.1 identified by Glimmer3; putative; DNA internalization-related competence protein ComEC/Rec2 1140685 8536942 D11S_1223 Aggregatibacter actinomycetemcomitans D11S-1 DNA internalization-related competence protein ComEC/Rec2 YP_003255824.1 1138451 R 668336 CDS YP_003255825.1 261867903 8536943 1141178..1141615 1 NC_013416.1 identified by Glimmer3; putative; RNA polymerase-binding protein DksA 1141615 8536943 D11S_1224 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase-binding protein DksA YP_003255825.1 1141178 D 668336 CDS YP_003255826.1 261867904 8536944 1141899..1143677 1 NC_013416.1 identified by Glimmer3; putative; poly(A) polymerase 1143677 8536944 D11S_1225 Aggregatibacter actinomycetemcomitans D11S-1 poly(A) polymerase YP_003255826.1 1141899 D 668336 CDS YP_003255827.1 261867905 8536945 complement(1143748..1144110) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1144110 8536945 D11S_1226 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255827.1 1143748 R 668336 CDS YP_003255828.1 261867906 8536946 complement(1144457..1146592) 1 NC_013416.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 1146592 8536946 D11S_1227 Aggregatibacter actinomycetemcomitans D11S-1 phosphate acetyltransferase YP_003255828.1 1144457 R 668336 CDS YP_003255829.1 261867907 8536947 complement(1146662..1147864) 1 NC_013416.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1147864 8536947 D11S_1228 Aggregatibacter actinomycetemcomitans D11S-1 acetate kinase YP_003255829.1 1146662 R 668336 CDS YP_003255830.1 261867908 8536948 1148132..1148575 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1148575 8536948 D11S_1229 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255830.1 1148132 D 668336 CDS YP_003255831.1 261867909 8536949 1148754..1149296 1 NC_013416.1 identified by Glimmer3; putative; CvpA family protein 1149296 8536949 D11S_1230 Aggregatibacter actinomycetemcomitans D11S-1 CvpA family protein YP_003255831.1 1148754 D 668336 CDS YP_003255832.1 261867910 8536950 complement(1149293..1149418) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1149418 8536950 D11S_1231 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255832.1 1149293 R 668336 CDS YP_003255833.1 261867911 8536951 complement(1149440..1151515) 1 NC_013416.1 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 1151515 malQ 8536951 malQ Aggregatibacter actinomycetemcomitans D11S-1 4-alpha-glucanotransferase YP_003255833.1 1149440 R 668336 CDS YP_003255834.1 261867912 8536952 complement(1151618..1154008) 1 NC_013416.1 identified by Glimmer3; putative; maltodextrin phosphorylase 1154008 8536952 D11S_1233 Aggregatibacter actinomycetemcomitans D11S-1 maltodextrin phosphorylase YP_003255834.1 1151618 R 668336 CDS YP_003255835.1 261867913 8536953 1154200..1156890 1 NC_013416.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; transcriptional regulator MalT 1156890 8536953 D11S_1234 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulator MalT YP_003255835.1 1154200 D 668336 CDS YP_003255836.1 261867914 8536954 complement(1157043..1157903) 1 NC_013416.1 with TehA confers resistance to tellurite; tellurite resistance protein TehB 1157903 8536954 D11S_1235 Aggregatibacter actinomycetemcomitans D11S-1 tellurite resistance protein TehB YP_003255836.1 1157043 R 668336 CDS YP_003255837.1 261867915 8536955 1158297..1160954 1 NC_013416.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 1160954 aceE 8536955 aceE Aggregatibacter actinomycetemcomitans D11S-1 pyruvate dehydrogenase subunit E1 YP_003255837.1 1158297 D 668336 CDS YP_003255838.1 261867916 8536956 1160983..1162653 1 NC_013416.1 identified by Glimmer3; putative; dihydrolipoamide acetyltransferase 1162653 8536956 D11S_1237 Aggregatibacter actinomycetemcomitans D11S-1 dihydrolipoamide acetyltransferase YP_003255838.1 1160983 D 668336 CDS YP_003255839.1 261867917 8536957 1162690..1164171 1 NC_013416.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1164171 8536957 D11S_1238 Aggregatibacter actinomycetemcomitans D11S-1 dihydrolipoamide dehydrogenase YP_003255839.1 1162690 D 668336 CDS YP_003255840.1 261867918 8536958 complement(1164257..1164376) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1164376 8536958 D11S_1239 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255840.1 1164257 R 668336 CDS YP_003255841.1 261867919 8536959 complement(1164601..1165155) 1 NC_013416.1 identified by Glimmer3; putative; NfnB protein 1165155 8536959 D11S_1240 Aggregatibacter actinomycetemcomitans D11S-1 NfnB protein YP_003255841.1 1164601 R 668336 CDS YP_003255842.1 261867920 8536960 1165279..1167159 1 NC_013416.1 identified by Glimmer3; putative; signal peptide peptidase SppA, 67K type 1167159 8536960 D11S_1241 Aggregatibacter actinomycetemcomitans D11S-1 signal peptide peptidase SppA, 67K type YP_003255842.1 1165279 D 668336 CDS YP_003255843.1 261867921 8536961 1167200..1168324 1 NC_013416.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 1168324 tyrA 8536961 tyrA Aggregatibacter actinomycetemcomitans D11S-1 bifunctional chorismate mutase/prephenate dehydrogenase YP_003255843.1 1167200 D 668336 CDS YP_003255844.1 261867922 8536962 1168398..1169021 1 NC_013416.1 identified by Glimmer3; putative; SUA5 protein 1169021 8536962 D11S_1243 Aggregatibacter actinomycetemcomitans D11S-1 SUA5 protein YP_003255844.1 1168398 D 668336 CDS YP_003255845.1 261867923 8536963 1169076..1170062 1 NC_013416.1 identified by Glimmer3; putative; ribosomal large subunit pseudouridine synthase B 1170062 8536963 D11S_1244 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal large subunit pseudouridine synthase B YP_003255845.1 1169076 D 668336 CDS YP_003255846.1 261867924 8536964 1170074..1171045 1 NC_013416.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 1171045 cysB 8536964 cysB Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulator CysB YP_003255846.1 1170074 D 668336 CDS YP_003255847.1 261867925 8536965 1171130..1171957 1 NC_013416.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1171957 dapD 8536965 dapD Aggregatibacter actinomycetemcomitans D11S-1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_003255847.1 1171130 D 668336 CDS YP_003255848.1 261867926 8536966 complement(1172072..1172392) 1 NC_013416.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 1172392 8536966 D11S_1247 Aggregatibacter actinomycetemcomitans D11S-1 dsDNA-mimic protein YP_003255848.1 1172072 R 668336 CDS YP_003255849.1 261867927 8536967 complement(1172426..1172560) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1172560 8536967 D11S_1248 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255849.1 1172426 R 668336 CDS YP_003255850.1 261867928 8536968 complement(1172863..1173861) 1 NC_013416.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 1173861 8536968 D11S_1249 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional repressor PurR YP_003255850.1 1172863 R 668336 CDS YP_003255851.1 261867929 8536969 complement(1174167..1175270) 1 NC_013416.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 1175270 metX 8536969 metX Aggregatibacter actinomycetemcomitans D11S-1 homoserine O-acetyltransferase YP_003255851.1 1174167 R 668336 CDS YP_003255852.1 261867930 8536970 1175463..1176176 1 NC_013416.1 identified by Glimmer3; putative; PurR protein 1176176 8536970 D11S_1251 Aggregatibacter actinomycetemcomitans D11S-1 PurR protein YP_003255852.1 1175463 D 668336 CDS YP_003255853.1 261867931 8536971 complement(1176160..1177146) 1 NC_013416.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 1177146 8536971 D11S_1252 Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding transcriptional regulator FruR YP_003255853.1 1176160 R 668336 CDS YP_003255854.1 261867932 8536972 1177981..1178238 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1178238 8536972 D11S_1253 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255854.1 1177981 D 668336 CDS YP_003255855.1 261867933 8536973 complement(1178274..1178393) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1178393 8536973 D11S_1254 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255855.1 1178274 R 668336 CDS YP_003255856.1 261867934 8536974 complement(1179410..1179892) 1 NC_013416.1 identified by Glimmer3; putative; phosphoribosylformylglycinamidine synthase 1179892 8536974 D11S_1255 Aggregatibacter actinomycetemcomitans D11S-1 phosphoribosylformylglycinamidine synthase YP_003255856.1 1179410 R 668336 CDS YP_003255857.1 261867935 8536975 complement(1179907..1180548) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type biogenesis protein CcdA 1180548 8536975 D11S_1256 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type biogenesis protein CcdA YP_003255857.1 1179907 R 668336 CDS YP_003255858.1 261867936 8536976 complement(1180552..1181622) 1 NC_013416.1 identified by Glimmer3; putative; peptide methionine sulfoxide reductase MsrA/msrB 1181622 8536976 D11S_1257 Aggregatibacter actinomycetemcomitans D11S-1 peptide methionine sulfoxide reductase MsrA/msrB YP_003255858.1 1180552 R 668336 CDS YP_003255859.1 261867937 8536977 1181838..1182530 1 NC_013416.1 identified by Glimmer3; putative; carbonate dehydratase 1182530 8536977 D11S_1258 Aggregatibacter actinomycetemcomitans D11S-1 carbonate dehydratase YP_003255859.1 1181838 D 668336 CDS YP_003255860.1 261867938 8536978 complement(1182636..1183223) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1183223 8536978 D11S_1259 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255860.1 1182636 R 668336 CDS YP_003255861.1 261867939 8536979 complement(1183288..1183872) 1 NC_013416.1 identified by Glimmer3; putative; phosphoheptose isomerase 1183872 8536979 D11S_1260 Aggregatibacter actinomycetemcomitans D11S-1 phosphoheptose isomerase YP_003255861.1 1183288 R 668336 CDS YP_003255862.1 261867940 8536980 complement(1183885..1184253) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1184253 8536980 D11S_1261 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255862.1 1183885 R 668336 CDS YP_003255863.1 261867941 8536981 complement(1184254..1185978) 1 NC_013416.1 identified by Glimmer3; putative; LppC 1185978 8536981 D11S_1262 Aggregatibacter actinomycetemcomitans D11S-1 LppC YP_003255863.1 1184254 R 668336 CDS YP_003255864.1 261867942 8536982 1186055..1186903 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1186903 8536982 D11S_1263 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255864.1 1186055 D 668336 CDS YP_003255865.1 261867943 8536983 1187173..1188762 1 NC_013416.1 identified by Glimmer3; putative; glycerol-3-phosphate dehydrogenase 1188762 8536983 D11S_1264 Aggregatibacter actinomycetemcomitans D11S-1 glycerol-3-phosphate dehydrogenase YP_003255865.1 1187173 D 668336 CDS YP_003255866.1 261867944 8536984 1188939..1190276 1 NC_013416.1 identified by Glimmer3; putative; Ndh protein 1190276 8536984 D11S_1265 Aggregatibacter actinomycetemcomitans D11S-1 Ndh protein YP_003255866.1 1188939 D 668336 CDS YP_003255867.1 261867945 8536985 complement(1190379..1190969) 1 NC_013416.1 identified by Glimmer3; putative; fmn-dependent NADH-azoreductase 1190969 8536985 D11S_1266 Aggregatibacter actinomycetemcomitans D11S-1 fmn-dependent NADH-azoreductase YP_003255867.1 1190379 R 668336 CDS YP_003255868.1 261867946 8536986 1191162..1192220 1 NC_013416.1 SohB; periplasmic protein; member of the peptidase S49 family; putative periplasmic protease 1192220 8536986 D11S_1267 Aggregatibacter actinomycetemcomitans D11S-1 putative periplasmic protease YP_003255868.1 1191162 D 668336 CDS YP_003255869.1 261867947 8536987 1192410..1193234 1 NC_013416.1 identified by Glimmer3; putative; Plp4 1193234 8536987 D11S_1268 Aggregatibacter actinomycetemcomitans D11S-1 Plp4 YP_003255869.1 1192410 D 668336 CDS YP_003255870.1 261867948 8536988 complement(1193293..1194168) 1 NC_013416.1 identified by Glimmer3; putative; fructosamine kinase 1194168 8536988 D11S_1269 Aggregatibacter actinomycetemcomitans D11S-1 fructosamine kinase YP_003255870.1 1193293 R 668336 CDS YP_003255871.1 261867949 8536989 1194409..1196340 1 NC_013416.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 1196340 8536989 D11S_1270 Aggregatibacter actinomycetemcomitans D11S-1 threonyl-tRNA synthetase YP_003255871.1 1194409 D 668336 CDS YP_003255872.1 261867950 8536990 1196591..1197037 1 NC_013416.1 might be a pseudogene; identified by Glimmer3; putative; putative type III restriction-modification system modification protein 1197037 8536990 D11S_1271 Aggregatibacter actinomycetemcomitans D11S-1 putative type III restriction-modification system modification protein YP_003255872.1 1196591 D 668336 CDS YP_003255873.1 261867951 8536991 complement(1196995..1197123) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1197123 8536991 D11S_1272 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255873.1 1196995 R 668336 CDS YP_003255874.1 261867952 8536992 1197082..1197810 1 NC_013416.1 identified by Glimmer3; putative; putative type III restriction-modification system endonuclease protein 1197810 8536992 D11S_1273 Aggregatibacter actinomycetemcomitans D11S-1 putative type III restriction-modification system endonuclease protein YP_003255874.1 1197082 D 668336 CDS YP_003255875.1 261867953 8536993 1197813..1198112 1 NC_013416.1 identified by Glimmer3; putative; type III restriction-modification system EcoPI enzyme subunit res 1198112 8536993 D11S_1274 Aggregatibacter actinomycetemcomitans D11S-1 type III restriction-modification system EcoPI enzyme subunit res YP_003255875.1 1197813 D 668336 CDS YP_003255876.1 261867954 8536994 complement(1198101..1198214) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1198214 8536994 D11S_1275 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255876.1 1198101 R 668336 CDS YP_003255877.1 261867955 8536995 complement(1198229..1199008) 1 NC_013416.1 identified by Glimmer3; putative; ferredoxin--NADP reductase 1199008 8536995 D11S_1276 Aggregatibacter actinomycetemcomitans D11S-1 ferredoxin--NADP reductase YP_003255877.1 1198229 R 668336 CDS YP_003255878.1 261867956 8536996 1199383..1199862 1 NC_013416.1 identified by Glimmer3; putative; translation initiation factor IF-3 1199862 8536996 D11S_1277 Aggregatibacter actinomycetemcomitans D11S-1 translation initiation factor IF-3 YP_003255878.1 1199383 D 668336 CDS YP_003255879.1 261867957 8536997 complement(1199863..1200006) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1200006 8536997 D11S_1278 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255879.1 1199863 R 668336 CDS YP_003255880.1 261867958 8536998 1200337..1200690 1 NC_013416.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 1200690 rplT 8536998 rplT Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L20 YP_003255880.1 1200337 D 668336 CDS YP_003255881.1 261867959 8536999 complement(1200739..1200852) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1200852 8536999 D11S_1280 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255881.1 1200739 R 668336 CDS YP_003255882.1 261867960 8537000 complement(1202020..1202139) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1202139 8537000 D11S_1281 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255882.1 1202020 R 668336 CDS YP_003255883.1 261867961 8537001 1202230..1202760 1 NC_013416.1 identified by Glimmer3; putative; tagatose-bisphosphate aldolase 1202760 8537001 D11S_1282 Aggregatibacter actinomycetemcomitans D11S-1 tagatose-bisphosphate aldolase YP_003255883.1 1202230 D 668336 CDS YP_003255884.1 261867962 8537002 1202750..1203181 1 NC_013416.1 identified by Glimmer3; putative; tagatose-bisphosphate aldolase 1203181 8537002 D11S_1283 Aggregatibacter actinomycetemcomitans D11S-1 tagatose-bisphosphate aldolase YP_003255884.1 1202750 D 668336 CDS YP_003255885.1 261867963 8537003 1203199..1203648 1 NC_013416.1 identified by Glimmer3; putative; tagatose-bisphosphate aldolase noncatalytic subunit 1203648 8537003 D11S_1284 Aggregatibacter actinomycetemcomitans D11S-1 tagatose-bisphosphate aldolase noncatalytic subunit YP_003255885.1 1203199 D 668336 CDS YP_003255886.1 261867964 8537004 1203809..1204567 1 NC_013416.1 identified by Glimmer3; putative; DeoR family transcriptional regulator 1204567 8537004 D11S_1285 Aggregatibacter actinomycetemcomitans D11S-1 DeoR family transcriptional regulator YP_003255886.1 1203809 D 668336 CDS YP_003255887.1 261867965 8537005 complement(1204687..1206537) 1 NC_013416.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1206537 8537005 D11S_1286 Aggregatibacter actinomycetemcomitans D11S-1 1-deoxy-D-xylulose-5-phosphate synthase YP_003255887.1 1204687 R 668336 CDS YP_003255888.1 261867966 8537006 complement(1206622..1207512) 1 NC_013416.1 identified by Glimmer3; putative; geranyltranstransferase 1207512 8537006 D11S_1287 Aggregatibacter actinomycetemcomitans D11S-1 geranyltranstransferase YP_003255888.1 1206622 R 668336 CDS YP_003255889.1 261867967 8537007 complement(1207523..1207768) 1 NC_013416.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1207768 8537007 D11S_1288 Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease VII small subunit YP_003255889.1 1207523 R 668336 CDS YP_003255890.1 261867968 8537008 1207993..1208889 1 NC_013416.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1208889 8537008 D11S_1289 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA carboxylase subunit beta YP_003255890.1 1207993 D 668336 CDS YP_003255891.1 261867969 8537009 1208912..1210258 1 NC_013416.1 identified by Glimmer3; putative; FolC bifunctional protein 1210258 8537009 D11S_1290 Aggregatibacter actinomycetemcomitans D11S-1 FolC bifunctional protein YP_003255891.1 1208912 D 668336 CDS YP_003255892.1 261867970 8537010 complement(1210315..1210956) 1 NC_013416.1 identified by Glimmer3; putative; phosphoglycerate mutase family protein 1210956 8537010 D11S_1291 Aggregatibacter actinomycetemcomitans D11S-1 phosphoglycerate mutase family protein YP_003255892.1 1210315 R 668336 CDS YP_003255893.1 261867971 8537011 complement(1211018..1212475) 1 NC_013416.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 1212475 cls 8537011 cls Aggregatibacter actinomycetemcomitans D11S-1 cardiolipin synthetase YP_003255893.1 1211018 R 668336 CDS YP_003255894.1 261867972 8537012 complement(1212489..1213397) 1 NC_013416.1 identified by Glimmer3; putative; membrane protein 1213397 8537012 D11S_1293 Aggregatibacter actinomycetemcomitans D11S-1 membrane protein YP_003255894.1 1212489 R 668336 CDS YP_003255895.1 261867973 8537013 1213528..1213731 1 NC_013416.1 identified by Glimmer3; putative; pseudouridine synthase Rlu family protein 1213731 8537013 D11S_1294 Aggregatibacter actinomycetemcomitans D11S-1 pseudouridine synthase Rlu family protein YP_003255895.1 1213528 D 668336 CDS YP_003255896.1 261867974 8537014 1213739..1214206 1 NC_013416.1 identified by Glimmer3; putative; pseudouridine synthase Rlu family protein 1214206 8537014 D11S_1295 Aggregatibacter actinomycetemcomitans D11S-1 pseudouridine synthase Rlu family protein YP_003255896.1 1213739 D 668336 CDS YP_003255897.1 261867975 8537015 1214251..1215114 1 NC_013416.1 identified by Glimmer3; putative; UAA transporter family 1215114 8537015 D11S_1296 Aggregatibacter actinomycetemcomitans D11S-1 UAA transporter family YP_003255897.1 1214251 D 668336 CDS YP_003255898.1 261867976 8537016 1215197..1215520 1 NC_013416.1 identified by Glimmer3; putative; alkylphosphonate utilization operon protein PhnA 1215520 8537016 D11S_1297 Aggregatibacter actinomycetemcomitans D11S-1 alkylphosphonate utilization operon protein PhnA YP_003255898.1 1215197 D 668336 CDS YP_003255899.1 261867977 8537017 complement(1215876..1216115) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1216115 8537017 D11S_1298 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255899.1 1215876 R 668336 CDS YP_003255900.1 261867978 8537018 complement(1216328..1217266) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1217266 8537018 D11S_1299 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255900.1 1216328 R 668336 CDS YP_003255901.1 261867979 8537019 1217833..1218102 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1218102 8537019 D11S_1300 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255901.1 1217833 D 668336 CDS YP_003255902.1 261867980 8537020 complement(1218412..1218651) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1218651 8537020 D11S_1301 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255902.1 1218412 R 668336 CDS YP_003255903.1 261867981 8537021 1218729..1220270 1 NC_013416.1 identified by Glimmer3; putative; alpha/beta superfamily hydrolase 1220270 8537021 D11S_1302 Aggregatibacter actinomycetemcomitans D11S-1 alpha/beta superfamily hydrolase YP_003255903.1 1218729 D 668336 CDS YP_003255904.1 261867982 8537022 complement(1220543..1221916) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1221916 8537022 D11S_1303 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255904.1 1220543 R 668336 CDS YP_003255905.1 261867983 8537023 complement(1221993..1223927) 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter-like protein 1223927 8537023 D11S_1304 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter-like protein YP_003255905.1 1221993 R 668336 CDS YP_003255906.1 261867984 8537024 complement(1223947..1225131) 1 NC_013416.1 identified by Glimmer3; putative; MacA 1225131 8537024 D11S_1305 Aggregatibacter actinomycetemcomitans D11S-1 MacA YP_003255906.1 1223947 R 668336 CDS YP_003255907.1 261867985 8537025 1225332..1227023 1 NC_013416.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1227023 8537025 D11S_1306 Aggregatibacter actinomycetemcomitans D11S-1 glutaminyl-tRNA synthetase YP_003255907.1 1225332 D 668336 CDS YP_003255908.1 261867986 8537026 1227095..1227529 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1227529 8537026 D11S_1307 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255908.1 1227095 D 668336 CDS YP_003255909.1 261867987 8537027 1227629..1228189 1 NC_013416.1 identified by Glimmer3; putative; 4-alpha-glucanotransferase 1228189 8537027 D11S_1308 Aggregatibacter actinomycetemcomitans D11S-1 4-alpha-glucanotransferase YP_003255909.1 1227629 D 668336 CDS YP_003255910.1 261867988 8537028 1228186..1230381 1 NC_013416.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching enzyme 1230381 8537028 D11S_1309 Aggregatibacter actinomycetemcomitans D11S-1 glycogen branching enzyme YP_003255910.1 1228186 D 668336 CDS YP_003255911.1 261867989 8537029 1230378..1232387 1 NC_013416.1 identified by Glimmer3; putative; glycogen debranching protein GlgX 1232387 8537029 D11S_1310 Aggregatibacter actinomycetemcomitans D11S-1 glycogen debranching protein GlgX YP_003255911.1 1230378 D 668336 CDS YP_003255912.1 261867990 8537030 1232414..1233724 1 NC_013416.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 1233724 glgC 8537030 glgC Aggregatibacter actinomycetemcomitans D11S-1 glucose-1-phosphate adenylyltransferase YP_003255912.1 1232414 D 668336 CDS YP_003255913.1 261867991 8537031 1233926..1235365 1 NC_013416.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 1235365 glgA 8537031 glgA Aggregatibacter actinomycetemcomitans D11S-1 glycogen synthase YP_003255913.1 1233926 D 668336 CDS YP_003255914.1 261867992 8537032 1235489..1237954 1 NC_013416.1 identified by Glimmer3; putative; glycogen phosphorylase 1237954 8537032 D11S_1313 Aggregatibacter actinomycetemcomitans D11S-1 glycogen phosphorylase YP_003255914.1 1235489 D 668336 CDS YP_003255915.1 261867993 8537033 complement(1237979..1238119) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1238119 8537033 D11S_1314 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255915.1 1237979 R 668336 CDS YP_003255916.1 261867994 8537034 complement(1238073..1238678) 1 NC_013416.1 identified by Glimmer3; putative; cobalt transport protein CbiM 1238678 8537034 D11S_1315 Aggregatibacter actinomycetemcomitans D11S-1 cobalt transport protein CbiM YP_003255916.1 1238073 R 668336 CDS YP_003255917.1 261867995 8537035 1238892..1239179 1 NC_013416.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1239179 8537035 D11S_1316 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L25 YP_003255917.1 1238892 D 668336 CDS YP_003255918.1 261867996 8537036 1239328..1239930 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein HlpB 1239930 8537036 D11S_1317 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein HlpB YP_003255918.1 1239328 D 668336 CDS YP_003255919.1 261867997 8537037 1240105..1240983 1 NC_013416.1 identified by Glimmer3; putative; DacC protein 1240983 8537037 D11S_1318 Aggregatibacter actinomycetemcomitans D11S-1 DacC protein YP_003255919.1 1240105 D 668336 CDS YP_003255920.1 261867998 8537038 1241163..1242491 1 NC_013416.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 1242491 8537038 D11S_1319 Aggregatibacter actinomycetemcomitans D11S-1 condesin subunit F YP_003255920.1 1241163 D 668336 CDS YP_003255921.1 261867999 8537039 1242614..1245940 1 NC_013416.1 identified by Glimmer3; putative; 2-acyl-glycerophospho-ethanolamine acyltransferase 1245940 8537039 D11S_1320 Aggregatibacter actinomycetemcomitans D11S-1 2-acyl-glycerophospho-ethanolamine acyltransferase YP_003255921.1 1242614 D 668336 CDS YP_003255922.1 261868000 8537040 1245931..1246119 1 NC_013416.1 identified by Glimmer3; putative; 2-acyl-glycerophospho-ethanolamine acyltransferase 1246119 8537040 D11S_1321 Aggregatibacter actinomycetemcomitans D11S-1 2-acyl-glycerophospho-ethanolamine acyltransferase YP_003255922.1 1245931 D 668336 CDS YP_003255923.1 261868001 8537041 1246140..1246880 1 NC_013416.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 1246880 8537041 D11S_1322 Aggregatibacter actinomycetemcomitans D11S-1 condesin subunit E YP_003255923.1 1246140 D 668336 CDS YP_003255924.1 261868002 8537042 1246880..1251370 1 NC_013416.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 1251370 mukB 8537042 mukB Aggregatibacter actinomycetemcomitans D11S-1 cell division protein MukB YP_003255924.1 1246880 D 668336 CDS YP_003255925.1 261868003 8537043 1251446..1252318 1 NC_013416.1 identified by Glimmer3; putative; cell division protein MukB 1252318 8537043 D11S_1324 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein MukB YP_003255925.1 1251446 D 668336 CDS YP_003255926.1 261868004 8537044 1252330..1253757 1 NC_013416.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 1253757 sbcB 8537044 sbcB Aggregatibacter actinomycetemcomitans D11S-1 exonuclease I YP_003255926.1 1252330 D 668336 CDS YP_003255927.1 261868005 8537045 1254005..1254178 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 1254178 8537045 D11S_1326 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003255927.1 1254005 D 668336 CDS YP_003255928.1 261868006 8537046 1254220..1254390 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 1254390 8537046 D11S_1327 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003255928.1 1254220 D 668336 CDS YP_003255929.1 261868007 8537047 1254719..1254958 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 1254958 8537047 D11S_1328 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003255929.1 1254719 D 668336 CDS YP_003255930.1 261868008 8537048 1255346..1255867 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1255867 8537048 D11S_1329 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255930.1 1255346 D 668336 CDS YP_003255931.1 261868009 8537049 1257106..1257591 1 NC_013416.1 identified by Glimmer3; putative; nonheme iron-containing ferritin 1257591 8537049 D11S_1330 Aggregatibacter actinomycetemcomitans D11S-1 nonheme iron-containing ferritin YP_003255931.1 1257106 D 668336 CDS YP_003255932.1 261868010 8537050 1257607..1258104 1 NC_013416.1 identified by Glimmer3; putative; ferritin 1258104 8537050 D11S_1331 Aggregatibacter actinomycetemcomitans D11S-1 ferritin YP_003255932.1 1257607 D 668336 CDS YP_003255933.1 261868011 8537051 complement(1258166..1258336) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1258336 8537051 D11S_1332 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255933.1 1258166 R 668336 CDS YP_003255934.1 261868012 8537052 1258444..1259217 1 NC_013416.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 1259217 8537052 D11S_1333 Aggregatibacter actinomycetemcomitans D11S-1 fumarate/nitrate reduction transcriptional regulator YP_003255934.1 1258444 D 668336 CDS YP_003255935.1 261868013 8537053 1259336..1260268 1 NC_013416.1 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 1260268 8537053 D11S_1334 Aggregatibacter actinomycetemcomitans D11S-1 universal stress protein UspE YP_003255935.1 1259336 D 668336 CDS YP_003255936.1 261868014 8537054 1260395..1261231 1 NC_013416.1 identified by Glimmer3; putative; universal stress protein UspE 1261231 8537054 D11S_1335 Aggregatibacter actinomycetemcomitans D11S-1 universal stress protein UspE YP_003255936.1 1260395 D 668336 CDS YP_003255937.1 261868015 8537055 complement(1261316..1263922) 1 NC_013416.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1263922 8537055 D11S_1336 Aggregatibacter actinomycetemcomitans D11S-1 DNA topoisomerase I YP_003255937.1 1261316 R 668336 CDS YP_003255938.1 261868016 8537056 complement(1264160..1264576) 1 NC_013416.1 identified by Glimmer3; putative; fumarate hydratase 1264576 8537056 D11S_1337 Aggregatibacter actinomycetemcomitans D11S-1 fumarate hydratase YP_003255938.1 1264160 R 668336 CDS YP_003255939.1 261868017 8537057 complement(1264676..1265695) 1 NC_013416.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 1265695 8537057 D11S_1338 Aggregatibacter actinomycetemcomitans D11S-1 dihydroorotate dehydrogenase 2 YP_003255939.1 1264676 R 668336 CDS YP_003255940.1 261868018 8537058 complement(1265768..1268377) 1 NC_013416.1 identified by Glimmer3; putative; aminopeptidase N 1268377 pepN 8537058 pepN Aggregatibacter actinomycetemcomitans D11S-1 aminopeptidase N YP_003255940.1 1265768 R 668336 CDS YP_003255941.1 261868019 8537059 1268799..1269989 1 NC_013416.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 1269989 8537059 D11S_1340 Aggregatibacter actinomycetemcomitans D11S-1 aromatic amino acid aminotransferase YP_003255941.1 1268799 D 668336 CDS YP_003255942.1 261868020 8537060 complement(1270040..1270426) 1 NC_013416.1 identified by Glimmer3; putative; AcrR protein 1270426 8537060 D11S_1341 Aggregatibacter actinomycetemcomitans D11S-1 AcrR protein YP_003255942.1 1270040 R 668336 CDS YP_003255943.1 261868021 8537061 1270480..1270656 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1270656 8537061 D11S_1342 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255943.1 1270480 D 668336 CDS YP_003255944.1 261868022 8537062 1270777..1271736 1 NC_013416.1 identified by Glimmer3; putative; AcrA protein 1271736 8537062 D11S_1343 Aggregatibacter actinomycetemcomitans D11S-1 AcrA protein YP_003255944.1 1270777 D 668336 CDS YP_003255945.1 261868023 8537063 1271739..1272968 1 NC_013416.1 identified by Glimmer3; putative; CcmA protein 1272968 8537063 D11S_1344 Aggregatibacter actinomycetemcomitans D11S-1 CcmA protein YP_003255945.1 1271739 D 668336 CDS YP_003255946.1 261868024 8537064 1272972..1274483 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter-like protein 1274483 8537064 D11S_1345 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter-like protein YP_003255946.1 1272972 D 668336 CDS YP_003255947.1 261868025 8537065 1274485..1275612 1 NC_013416.1 identified by Glimmer3; putative; ABC-2 type transporter 1275612 8537065 D11S_1346 Aggregatibacter actinomycetemcomitans D11S-1 ABC-2 type transporter YP_003255947.1 1274485 D 668336 CDS YP_003255948.1 261868026 8537066 1275632..1276492 1 NC_013416.1 identified by Glimmer3; putative; TolC protein 1276492 8537066 D11S_1347 Aggregatibacter actinomycetemcomitans D11S-1 TolC protein YP_003255948.1 1275632 D 668336 CDS YP_003255949.1 261868027 8537067 1276511..1277530 1 NC_013416.1 identified by Glimmer3; putative; HmuU protein 1277530 8537067 D11S_1348 Aggregatibacter actinomycetemcomitans D11S-1 HmuU protein YP_003255949.1 1276511 D 668336 CDS YP_003255950.1 261868028 8537068 1277530..1278324 1 NC_013416.1 identified by Glimmer3; putative; cobalamin/Fe3+-siderophore ABC transporter ATPase 1278324 8537068 D11S_1349 Aggregatibacter actinomycetemcomitans D11S-1 cobalamin/Fe3+-siderophore ABC transporter ATPase YP_003255950.1 1277530 D 668336 CDS YP_003255951.1 261868029 8537069 1278337..1279371 1 NC_013416.1 identified by Glimmer3; putative; iron chelatin ABC transporter substrate binding protein 1279371 8537069 D11S_1350 Aggregatibacter actinomycetemcomitans D11S-1 iron chelatin ABC transporter substrate binding protein YP_003255951.1 1278337 D 668336 CDS YP_003255952.1 261868030 8537070 1279453..1279662 1 NC_013416.1 identified by Glimmer3; putative; TOBE domain-containing protein 1279662 8537070 D11S_1351 Aggregatibacter actinomycetemcomitans D11S-1 TOBE domain-containing protein YP_003255952.1 1279453 D 668336 CDS YP_003255953.1 261868031 8537071 complement(1279781..1280215) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane receptor FepA 1280215 8537071 D11S_1352 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane receptor FepA YP_003255953.1 1279781 R 668336 CDS YP_003255954.1 261868032 8537072 complement(1280292..1281008) 1 NC_013416.1 identified by Glimmer3; putative; TonB dependent outer membrane siderophore receptor protein 1281008 8537072 D11S_1353 Aggregatibacter actinomycetemcomitans D11S-1 TonB dependent outer membrane siderophore receptor protein YP_003255954.1 1280292 R 668336 CDS YP_003255955.1 261868033 8537073 complement(1281036..1281896) 1 NC_013416.1 identified by Glimmer3; putative; TonB dependent outer membrane siderophore receptor protein 1281896 8537073 D11S_1354 Aggregatibacter actinomycetemcomitans D11S-1 TonB dependent outer membrane siderophore receptor protein YP_003255955.1 1281036 R 668336 CDS YP_003255956.1 261868034 8537074 complement(1281991..1282740) 1 NC_013416.1 identified by Glimmer3; putative; iron chelate uptake ABC transporter ATP-binding protein 1282740 8537074 D11S_1355 Aggregatibacter actinomycetemcomitans D11S-1 iron chelate uptake ABC transporter ATP-binding protein YP_003255956.1 1281991 R 668336 CDS YP_003255957.1 261868035 8537075 complement(1282737..1283750) 1 NC_013416.1 identified by Glimmer3; putative; FecCD family ABC transporter permease 1283750 8537075 D11S_1356 Aggregatibacter actinomycetemcomitans D11S-1 FecCD family ABC transporter permease YP_003255957.1 1282737 R 668336 CDS YP_003255958.1 261868036 8537076 complement(1283750..1284751) 1 NC_013416.1 identified by Glimmer3; putative; iron ABC transporter solute-binding protein 1284751 8537076 D11S_1357 Aggregatibacter actinomycetemcomitans D11S-1 iron ABC transporter solute-binding protein YP_003255958.1 1283750 R 668336 CDS YP_003255959.1 261868037 8537077 1284840..1285013 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1285013 8537077 D11S_1358 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255959.1 1284840 D 668336 CDS YP_003255960.1 261868038 8537078 1285015..1287027 1 NC_013416.1 identified by Glimmer3; putative; TonB-dependent receptor 1287027 8537078 D11S_1359 Aggregatibacter actinomycetemcomitans D11S-1 TonB-dependent receptor YP_003255960.1 1285015 D 668336 CDS YP_003255961.1 261868039 8537079 complement(1287117..1287533) 1 NC_013416.1 identified by Glimmer3; putative; DoxX family protein 1287533 8537079 D11S_1360 Aggregatibacter actinomycetemcomitans D11S-1 DoxX family protein YP_003255961.1 1287117 R 668336 CDS YP_003255962.1 261868040 8537080 1287674..1288516 1 NC_013416.1 identified by Glimmer3; putative; threonyl-tRNA synthetase 1288516 8537080 D11S_1361 Aggregatibacter actinomycetemcomitans D11S-1 threonyl-tRNA synthetase YP_003255962.1 1287674 D 668336 CDS YP_003255963.1 261868041 8537081 1288513..1288638 1 NC_013416.1 identified by Glimmer3; putative; threonyl-tRNA synthetase 1288638 8537081 D11S_1362 Aggregatibacter actinomycetemcomitans D11S-1 threonyl-tRNA synthetase YP_003255963.1 1288513 D 668336 CDS YP_003255964.1 261868042 8537082 complement(1288733..1289221) 1 NC_013416.1 identified by Glimmer3; putative; NlpC 1289221 8537082 D11S_1363 Aggregatibacter actinomycetemcomitans D11S-1 NlpC YP_003255964.1 1288733 R 668336 CDS YP_003255965.1 261868043 8537083 complement(1289273..1289569) 1 NC_013416.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1289569 ihfA 8537083 ihfA Aggregatibacter actinomycetemcomitans D11S-1 integration host factor subunit alpha YP_003255965.1 1289273 R 668336 CDS YP_003255966.1 261868044 8537084 complement(1289573..1291963) 1 NC_013416.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1291963 pheT 8537084 pheT Aggregatibacter actinomycetemcomitans D11S-1 phenylalanyl-tRNA synthetase subunit beta YP_003255966.1 1289573 R 668336 CDS YP_003255967.1 261868045 8537085 complement(1291983..1292972) 1 NC_013416.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1292972 pheS 8537085 pheS Aggregatibacter actinomycetemcomitans D11S-1 phenylalanyl-tRNA synthetase subunit alpha YP_003255967.1 1291983 R 668336 CDS YP_003255968.1 261868046 8537086 complement(1293234..1294109) 1 NC_013416.1 putative metalloprotease; heat shock protein HtpX 1294109 8537086 D11S_1367 Aggregatibacter actinomycetemcomitans D11S-1 heat shock protein HtpX YP_003255968.1 1293234 R 668336 CDS YP_003255969.1 261868047 8537087 1294792..1295727 1 NC_013416.1 identified by Glimmer3; putative; arabinose 5-phosphate isomerase 1295727 8537087 D11S_1368 Aggregatibacter actinomycetemcomitans D11S-1 arabinose 5-phosphate isomerase YP_003255969.1 1294792 D 668336 CDS YP_003255970.1 261868048 8537088 1295727..1296281 1 NC_013416.1 identified by Glimmer3; putative; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1296281 8537088 D11S_1369 Aggregatibacter actinomycetemcomitans D11S-1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003255970.1 1295727 D 668336 CDS YP_003255971.1 261868049 8537089 1296449..1297996 1 NC_013416.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1297996 8537089 D11S_1370 Aggregatibacter actinomycetemcomitans D11S-1 anthranilate synthase component I YP_003255971.1 1296449 D 668336 CDS YP_003255972.1 261868050 8537090 1298007..1298531 1 NC_013416.1 identified by Glimmer3; putative; anthranilate synthase component II 1298531 8537090 D11S_1371 Aggregatibacter actinomycetemcomitans D11S-1 anthranilate synthase component II YP_003255972.1 1298007 D 668336 CDS YP_003255973.1 261868051 8537091 1298670..1299062 1 NC_013416.1 identified by Glimmer3; putative; anthranilate phosphoribosyltransferase 1299062 8537091 D11S_1372 Aggregatibacter actinomycetemcomitans D11S-1 anthranilate phosphoribosyltransferase YP_003255973.1 1298670 D 668336 CDS YP_003255974.1 261868052 8537092 1299074..1300075 1 NC_013416.1 identified by Glimmer3; putative; anthranilate phosphoribosyltransferase 1300075 8537092 D11S_1373 Aggregatibacter actinomycetemcomitans D11S-1 anthranilate phosphoribosyltransferase YP_003255974.1 1299074 D 668336 CDS YP_003255975.1 261868053 8537093 1300084..1301514 1 NC_013416.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1301514 8537093 D11S_1374 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_003255975.1 1300084 D 668336 CDS YP_003255976.1 261868054 8537094 1301653..1301817 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1301817 8537094 D11S_1375 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255976.1 1301653 D 668336 CDS YP_003255977.1 261868055 8537095 1301966..1302241 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase 2 accessory protein HypG 1302241 8537095 D11S_1376 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase 2 accessory protein HypG YP_003255977.1 1301966 D 668336 CDS YP_003255978.1 261868056 8537096 complement(1302362..1302739) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1302739 8537096 D11S_1377 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255978.1 1302362 R 668336 CDS YP_003255979.1 261868057 8537097 1303064..1303222 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1303222 8537097 D11S_1378 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255979.1 1303064 D 668336 CDS YP_003255980.1 261868058 8537098 1303256..1303522 1 NC_013416.1 catalyzes the decarboxylation of oxaloacetate to form pyruvate and carbon dioxide; oxaloacetate decarboxylase subunit gamma 1303522 8537098 D11S_1379 Aggregatibacter actinomycetemcomitans D11S-1 oxaloacetate decarboxylase subunit gamma YP_003255980.1 1303256 D 668336 CDS YP_003255981.1 261868059 8537099 1303538..1305334 1 NC_013416.1 catalyzes the formation of pyruvate from oxaloacetate; oxaloacetate decarboxylase 1305334 8537099 D11S_1380 Aggregatibacter actinomycetemcomitans D11S-1 oxaloacetate decarboxylase YP_003255981.1 1303538 D 668336 CDS YP_003255982.1 261868060 8537100 1305345..1306649 1 NC_013416.1 identified by Glimmer3; putative; oxaloacetate decarboxylase subunit beta 1306649 8537100 D11S_1381 Aggregatibacter actinomycetemcomitans D11S-1 oxaloacetate decarboxylase subunit beta YP_003255982.1 1305345 D 668336 CDS YP_003255983.1 261868061 8537101 1307266..1307382 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1307382 8537101 D11S_1382 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255983.1 1307266 D 668336 CDS YP_003255984.1 261868062 8537102 complement(1308854..1309618) 1 NC_013416.1 identified by Glimmer3; putative; transferrin-binding protein 1 1309618 8537102 D11S_1383 Aggregatibacter actinomycetemcomitans D11S-1 transferrin-binding protein 1 YP_003255984.1 1308854 R 668336 CDS YP_003255985.1 261868063 8537103 complement(1309867..1309998) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1309998 8537103 D11S_1384 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003255985.1 1309867 R 668336 CDS YP_003255986.1 261868064 8537104 1310024..1310791 1 NC_013416.1 identified by Glimmer3; putative; NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg 1310791 8537104 D11S_1385 Aggregatibacter actinomycetemcomitans D11S-1 NADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg YP_003255986.1 1310024 D 668336 CDS YP_003255987.1 261868065 8537105 1310801..1311994 1 NC_013416.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1311994 8537105 D11S_1386 Aggregatibacter actinomycetemcomitans D11S-1 tryptophan synthase subunit beta YP_003255987.1 1310801 D 668336 CDS YP_003255988.1 261868066 8537106 1311997..1312803 1 NC_013416.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1312803 trpA 8537106 trpA Aggregatibacter actinomycetemcomitans D11S-1 tryptophan synthase subunit alpha YP_003255988.1 1311997 D 668336 CDS YP_003255989.1 261868067 8537107 1313079..1314764 1 NC_013416.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1314764 8537107 D11S_1388 Aggregatibacter actinomycetemcomitans D11S-1 ribonucleotide-diphosphate reductase subunit alpha YP_003255989.1 1313079 D 668336 CDS YP_003255990.1 261868068 8537108 1314895..1315884 1 NC_013416.1 identified by Glimmer3; putative; ribonucleoside-diphosphate reductase subunit beta 1315884 8537108 D11S_1389 Aggregatibacter actinomycetemcomitans D11S-1 ribonucleoside-diphosphate reductase subunit beta YP_003255990.1 1314895 D 668336 CDS YP_003255991.1 261868069 8537109 1316131..1317576 1 NC_013416.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1317576 8537109 D11S_1390 Aggregatibacter actinomycetemcomitans D11S-1 pyruvate kinase YP_003255991.1 1316131 D 668336 CDS YP_003255992.1 261868070 8537110 complement(1317680..1317982) 1 NC_013416.1 identified by Glimmer3; putative; autoinducer-2 (AI-2) modifying protein LsrG 1317982 8537110 D11S_1391 Aggregatibacter actinomycetemcomitans D11S-1 autoinducer-2 (AI-2) modifying protein LsrG YP_003255992.1 1317680 R 668336 CDS YP_003255993.1 261868071 8537111 complement(1318015..1318893) 1 NC_013416.1 identified by Glimmer3; putative; aldolase 1318893 8537111 D11S_1392 Aggregatibacter actinomycetemcomitans D11S-1 aldolase YP_003255993.1 1318015 R 668336 CDS YP_003255994.1 261868072 8537112 complement(1318917..1320014) 1 NC_013416.1 identified by Glimmer3; putative; autoinducer-2 (AI-2) kinase 1320014 8537112 D11S_1393 Aggregatibacter actinomycetemcomitans D11S-1 autoinducer-2 (AI-2) kinase YP_003255994.1 1318917 R 668336 CDS YP_003255995.1 261868073 8537113 complement(1320039..1321043) 1 NC_013416.1 identified by Glimmer3; putative; sugar ABC transporter permease 1321043 8537113 D11S_1394 Aggregatibacter actinomycetemcomitans D11S-1 sugar ABC transporter permease YP_003255995.1 1320039 R 668336 CDS YP_003255996.1 261868074 8537114 complement(1321057..1322088) 1 NC_013416.1 identified by Glimmer3; putative; inner membrane ABC transporter permease YdeY 1322088 8537114 D11S_1395 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane ABC transporter permease YdeY YP_003255996.1 1321057 R 668336 CDS YP_003255997.1 261868075 8537115 complement(1322097..1323614) 1 NC_013416.1 identified by Glimmer3; putative; ribose import ATP-binding protein RbsA 1323614 8537115 D11S_1396 Aggregatibacter actinomycetemcomitans D11S-1 ribose import ATP-binding protein RbsA YP_003255997.1 1322097 R 668336 CDS YP_003255998.1 261868076 8537116 1323858..1324823 1 NC_013416.1 identified by Glimmer3; putative; DeoR family transcriptional regulator 1324823 8537116 D11S_1397 Aggregatibacter actinomycetemcomitans D11S-1 DeoR family transcriptional regulator YP_003255998.1 1323858 D 668336 CDS YP_003255999.1 261868077 8537117 1324872..1326446 1 NC_013416.1 identified by Glimmer3; putative; autoinducer-2 (AI-2) kinase 1326446 8537117 D11S_1398 Aggregatibacter actinomycetemcomitans D11S-1 autoinducer-2 (AI-2) kinase YP_003255999.1 1324872 D 668336 CDS YP_003256000.1 261868078 8537118 complement(1326534..1327262) 1 NC_013416.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1327262 bioD 8537118 bioD Aggregatibacter actinomycetemcomitans D11S-1 dithiobiotin synthetase YP_003256000.1 1326534 R 668336 CDS YP_003256001.1 261868079 8537119 complement(1327339..1328568) 1 NC_013416.1 identified by Glimmer3; putative; Mlc 1328568 8537119 D11S_1400 Aggregatibacter actinomycetemcomitans D11S-1 Mlc YP_003256001.1 1327339 R 668336 CDS YP_003256002.1 261868080 8537120 1328764..1330167 1 NC_013416.1 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 1330167 asnC 8537120 asnC Aggregatibacter actinomycetemcomitans D11S-1 asparaginyl-tRNA synthetase YP_003256002.1 1328764 D 668336 CDS YP_003256003.1 261868081 8537121 complement(1330330..1330791) 1 NC_013416.1 identified by Glimmer3; putative; ClpXP protease specificity-enhancing factor 1330791 8537121 D11S_1402 Aggregatibacter actinomycetemcomitans D11S-1 ClpXP protease specificity-enhancing factor YP_003256003.1 1330330 R 668336 CDS YP_003256004.1 261868082 8537122 complement(1330803..1331444) 1 NC_013416.1 identified by Glimmer3; putative; Gst protein 1331444 8537122 D11S_1403 Aggregatibacter actinomycetemcomitans D11S-1 Gst protein YP_003256004.1 1330803 R 668336 CDS YP_003256005.1 261868083 8537123 complement(1331644..1332099) 1 NC_013416.1 identified by Glimmer3; putative; molybdopterin converting factor subunit 2 1332099 8537123 D11S_1404 Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin converting factor subunit 2 YP_003256005.1 1331644 R 668336 CDS YP_003256006.1 261868084 8537124 complement(1332100..1332348) 1 NC_013416.1 identified by Glimmer3; putative; molybdopterin converting factor subunit 1 1332348 8537124 D11S_1405 Aggregatibacter actinomycetemcomitans D11S-1 molybdopterin converting factor subunit 1 YP_003256006.1 1332100 R 668336 CDS YP_003256007.1 261868085 8537125 complement(1332348..1332869) 1 NC_013416.1 identified by Glimmer3; putative; molybdenum cofactor biosynthesis protein C 1332869 8537125 D11S_1406 Aggregatibacter actinomycetemcomitans D11S-1 molybdenum cofactor biosynthesis protein C YP_003256007.1 1332348 R 668336 CDS YP_003256008.1 261868086 8537126 complement(1332882..1333895) 1 NC_013416.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1333895 moaA 8537126 moaA Aggregatibacter actinomycetemcomitans D11S-1 molybdenum cofactor biosynthesis protein A YP_003256008.1 1332882 R 668336 CDS YP_003256009.1 261868087 8537127 1334253..1335221 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1335221 8537127 D11S_1408 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256009.1 1334253 D 668336 CDS YP_003256010.1 261868088 8537128 complement(1335286..1336278) 1 NC_013416.1 identified by Glimmer3; putative; death-on-curing protein 1336278 8537128 D11S_1409 Aggregatibacter actinomycetemcomitans D11S-1 death-on-curing protein YP_003256010.1 1335286 R 668336 CDS YP_003256011.1 261868089 8537129 1336461..1337165 1 NC_013416.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; peptidase E 1337165 8537129 D11S_1410 Aggregatibacter actinomycetemcomitans D11S-1 peptidase E YP_003256011.1 1336461 D 668336 CDS YP_003256012.1 261868090 8537130 complement(1337249..1338706) 1 NC_013416.1 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1338706 8537130 D11S_1411 Aggregatibacter actinomycetemcomitans D11S-1 thiamine biosynthesis protein ThiI YP_003256012.1 1337249 R 668336 CDS YP_003256013.1 261868091 8537131 1339012..1340112 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type protein TorY 1340112 8537131 D11S_1412 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type protein TorY YP_003256013.1 1339012 D 668336 CDS YP_003256014.1 261868092 8537132 1340173..1342653 1 NC_013416.1 identified by Glimmer3; putative; trimethylamiNe-n-oxide reductase 2 1342653 8537132 D11S_1413 Aggregatibacter actinomycetemcomitans D11S-1 trimethylamiNe-n-oxide reductase 2 YP_003256014.1 1340173 D 668336 CDS YP_003256015.1 261868093 8537133 complement(1342711..1343490) 1 NC_013416.1 identified by Glimmer3; putative; MmcQ protein 1343490 8537133 D11S_1414 Aggregatibacter actinomycetemcomitans D11S-1 MmcQ protein YP_003256015.1 1342711 R 668336 CDS YP_003256016.1 261868094 8537134 1343720..1345177 1 NC_013416.1 identified by Glimmer3; putative; CitT protein 1345177 8537134 D11S_1415 Aggregatibacter actinomycetemcomitans D11S-1 CitT protein YP_003256016.1 1343720 D 668336 CDS YP_003256017.1 261868095 8537135 1345268..1345390 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1345390 8537135 D11S_1416 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256017.1 1345268 D 668336 CDS YP_003256018.1 261868096 8537136 1345394..1345648 1 NC_013416.1 identified by Glimmer3; putative; putative plasmid stability protein StbD 1345648 8537136 D11S_1417 Aggregatibacter actinomycetemcomitans D11S-1 putative plasmid stability protein StbD YP_003256018.1 1345394 D 668336 CDS YP_003256019.1 261868097 8537137 1345645..1345929 1 NC_013416.1 identified by Glimmer3; putative; putative plasmid stability protein StbE 1345929 8537137 D11S_1418 Aggregatibacter actinomycetemcomitans D11S-1 putative plasmid stability protein StbE YP_003256019.1 1345645 D 668336 CDS YP_003256020.1 261868098 8537138 complement(1345942..1346727) 1 NC_013416.1 identified by Glimmer3; putative; tRNA pseudouridine synthase A 1346727 8537138 D11S_1419 Aggregatibacter actinomycetemcomitans D11S-1 tRNA pseudouridine synthase A YP_003256020.1 1345942 R 668336 CDS YP_003256021.1 261868099 8537139 1346726..1346845 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1346845 8537139 D11S_1420 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256021.1 1346726 D 668336 CDS YP_003256022.1 261868100 8537140 complement(1346890..1347282) 1 NC_013416.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1347282 rpsI 8537140 rpsI Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S9 YP_003256022.1 1346890 R 668336 CDS YP_003256023.1 261868101 8537141 complement(1347299..1347727) 1 NC_013416.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1347727 rplM 8537141 rplM Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L13 YP_003256023.1 1347299 R 668336 CDS YP_003256024.1 261868102 8537142 complement(1347971..1348567) 1 NC_013416.1 identified by Glimmer3; putative; tellurite resistance protein TehB 1348567 8537142 D11S_1423 Aggregatibacter actinomycetemcomitans D11S-1 tellurite resistance protein TehB YP_003256024.1 1347971 R 668336 CDS YP_003256025.1 261868103 8537143 complement(1348580..1350559) 1 NC_013416.1 identified by Glimmer3; putative; exodeoxyribonuclease V subunit alpha 1350559 8537143 D11S_1424 Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease V subunit alpha YP_003256025.1 1348580 R 668336 CDS YP_003256026.1 261868104 8537144 complement(1350559..1354224) 1 NC_013416.1 identified by Glimmer3; putative; exodeoxyribonuclease V subunit beta 1354224 8537144 D11S_1425 Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease V subunit beta YP_003256026.1 1350559 R 668336 CDS YP_003256027.1 261868105 8537145 complement(1354295..1354651) 1 NC_013416.1 identified by Glimmer3; putative; DsrE protein 1354651 8537145 D11S_1426 Aggregatibacter actinomycetemcomitans D11S-1 DsrE protein YP_003256027.1 1354295 R 668336 CDS YP_003256028.1 261868106 8537147 complement(1355076..1355606) 1 NC_013416.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1355606 8537147 D11S_1428 Aggregatibacter actinomycetemcomitans D11S-1 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YP_003256028.1 1355076 R 668336 CDS YP_003256029.1 261868107 8537148 complement(1355749..1357533) 1 NC_013416.1 identified by Glimmer3; putative; Putative protease La-like protein 1357533 8537148 D11S_1429 Aggregatibacter actinomycetemcomitans D11S-1 Putative protease La-like protein YP_003256029.1 1355749 R 668336 CDS YP_003256030.1 261868108 8537149 1357680..1358126 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1358126 8537149 D11S_1430 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256030.1 1357680 D 668336 CDS YP_003256031.1 261868109 8537150 complement(1358192..1358401) 1 NC_013416.1 identified by Glimmer3; putative; cold shock domain-containing protein CspD 1358401 8537150 D11S_1431 Aggregatibacter actinomycetemcomitans D11S-1 cold shock domain-containing protein CspD YP_003256031.1 1358192 R 668336 CDS YP_003256032.1 261868110 8537151 complement(1358592..1358756) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1358756 8537151 D11S_1432 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256032.1 1358592 R 668336 CDS YP_003256033.1 261868111 8537152 complement(1358810..1359523) 1 NC_013416.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 1359523 8537152 D11S_1433 Aggregatibacter actinomycetemcomitans D11S-1 tRNA pseudouridine synthase C YP_003256033.1 1358810 R 668336 CDS YP_003256034.1 261868112 8537153 complement(1359520..1359834) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1359834 8537153 D11S_1434 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256034.1 1359520 R 668336 CDS YP_003256035.1 261868113 8537154 1359929..1360723 1 NC_013416.1 identified by Glimmer3; putative; Zn-ribbon-containing protein 1360723 8537154 D11S_1435 Aggregatibacter actinomycetemcomitans D11S-1 Zn-ribbon-containing protein YP_003256035.1 1359929 D 668336 CDS YP_003256036.1 261868114 8537155 1360732..1361571 1 NC_013416.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1361571 queF 8537155 queF Aggregatibacter actinomycetemcomitans D11S-1 7-cyano-7-deazaguanine reductase YP_003256036.1 1360732 D 668336 CDS YP_003256037.1 261868115 8537156 complement(1361619..1362869) 1 NC_013416.1 identified by Glimmer3; putative; two component Fis family transcriptional regulator 1362869 8537156 D11S_1437 Aggregatibacter actinomycetemcomitans D11S-1 two component Fis family transcriptional regulator YP_003256037.1 1361619 R 668336 CDS YP_003256038.1 261868116 8537157 complement(1362862..1364844) 1 NC_013416.1 identified by Glimmer3; putative; PgtB 1364844 8537157 D11S_1438 Aggregatibacter actinomycetemcomitans D11S-1 PgtB YP_003256038.1 1362862 R 668336 CDS YP_003256039.1 261868117 8537158 complement(1364841..1366091) 1 NC_013416.1 identified by Glimmer3; putative; PgtC 1366091 8537158 D11S_1439 Aggregatibacter actinomycetemcomitans D11S-1 PgtC YP_003256039.1 1364841 R 668336 CDS YP_003256040.1 261868118 8537159 1366465..1367463 1 NC_013416.1 identified by Glimmer3; putative; extracellular solute-binding protein 1367463 8537159 D11S_1440 Aggregatibacter actinomycetemcomitans D11S-1 extracellular solute-binding protein YP_003256040.1 1366465 D 668336 CDS YP_003256041.1 261868119 8537160 1367485..1368282 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter-like protein 1368282 8537160 D11S_1441 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter-like protein YP_003256041.1 1367485 D 668336 CDS YP_003256042.1 261868120 8537161 1368288..1369457 1 NC_013416.1 identified by Glimmer3; putative; binding-protein-dependent transport systems inner membrane component 1369457 8537161 D11S_1442 Aggregatibacter actinomycetemcomitans D11S-1 binding-protein-dependent transport systems inner membrane component YP_003256042.1 1368288 D 668336 CDS YP_003256043.1 261868121 8537162 1369479..1370216 1 NC_013416.1 identified by Glimmer3; putative; MsmK 1370216 8537162 D11S_1443 Aggregatibacter actinomycetemcomitans D11S-1 MsmK YP_003256043.1 1369479 D 668336 CDS YP_003256044.1 261868122 8537163 complement(1370558..1372387) 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent metallopeptidase HflB 1372387 8537163 D11S_1444 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent metallopeptidase HflB YP_003256044.1 1370558 R 668336 CDS YP_003256045.1 261868123 8537164 complement(1372503..1373132) 1 NC_013416.1 identified by Glimmer3; putative; ribosomal RNA large subunit methyltransferase J 1373132 8537164 D11S_1445 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal RNA large subunit methyltransferase J YP_003256045.1 1372503 R 668336 CDS YP_003256046.1 261868124 8537165 complement(1373267..1374115) 1 NC_013416.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1374115 purU 8537165 purU Aggregatibacter actinomycetemcomitans D11S-1 formyltetrahydrofolate deformylase YP_003256046.1 1373267 R 668336 CDS YP_003256047.1 261868125 8537166 complement(1374184..1374582) 1 NC_013416.1 identified by Glimmer3; putative; H-NS histone family 1374582 8537166 D11S_1447 Aggregatibacter actinomycetemcomitans D11S-1 H-NS histone family YP_003256047.1 1374184 R 668336 CDS YP_003256048.1 261868126 8537167 1375023..1376555 1 NC_013416.1 identified by Glimmer3; putative; Na+/H+ antiporter family 1376555 8537167 D11S_1448 Aggregatibacter actinomycetemcomitans D11S-1 Na+/H+ antiporter family YP_003256048.1 1375023 D 668336 CDS YP_003256050.1 261868128 8537174 complement(1383160..1383987) 1 NC_013416.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1383987 8537174 D11S_1455 Aggregatibacter actinomycetemcomitans D11S-1 glutamate racemase YP_003256050.1 1383160 R 668336 CDS YP_003256051.1 261868129 8537175 complement(1384018..1384515) 1 NC_013416.1 identified by Glimmer3; putative; chorismate--pyruvate lyase 1384515 8537175 D11S_1456 Aggregatibacter actinomycetemcomitans D11S-1 chorismate--pyruvate lyase YP_003256051.1 1384018 R 668336 CDS YP_003256052.1 261868130 8537176 complement(1384508..1386589) 1 NC_013416.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1386589 8537176 D11S_1457 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent DNA helicase RecG YP_003256052.1 1384508 R 668336 CDS YP_003256053.1 261868131 8537177 complement(1386590..1388713) 1 NC_013416.1 identified by Glimmer3; putative; GTP pyrophosphokinase 1388713 8537177 D11S_1458 Aggregatibacter actinomycetemcomitans D11S-1 GTP pyrophosphokinase YP_003256053.1 1386590 R 668336 CDS YP_003256054.1 261868132 8537178 complement(1388759..1389025) 1 NC_013416.1 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 1389025 rpoZ 8537178 rpoZ Aggregatibacter actinomycetemcomitans D11S-1 DNA-directed RNA polymerase subunit omega YP_003256054.1 1388759 R 668336 CDS YP_003256055.1 261868133 8537179 complement(1389083..1389721) 1 NC_013416.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1389721 gmk 8537179 gmk Aggregatibacter actinomycetemcomitans D11S-1 guanylate kinase YP_003256055.1 1389083 R 668336 CDS YP_003256056.1 261868134 8537180 1389734..1389883 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1389883 8537180 D11S_1461 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256056.1 1389734 D 668336 CDS YP_003256057.1 261868135 8537181 1389963..1390967 1 NC_013416.1 identified by Glimmer3; putative; glyceraldehyde-3-phosphate dehydrogenase 1390967 8537181 D11S_1462 Aggregatibacter actinomycetemcomitans D11S-1 glyceraldehyde-3-phosphate dehydrogenase YP_003256057.1 1389963 D 668336 CDS YP_003256058.1 261868136 8537182 complement(1391061..1391477) 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein 1391477 8537182 D11S_1463 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein YP_003256058.1 1391061 R 668336 CDS YP_003256059.1 261868137 8537183 1391598..1391978 1 NC_013416.1 identified by Glimmer3; putative; lipid transport protein 1391978 8537183 D11S_1464 Aggregatibacter actinomycetemcomitans D11S-1 lipid transport protein YP_003256059.1 1391598 D 668336 CDS YP_003256060.1 261868138 8537184 1391971..1392264 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1392264 8537184 D11S_1465 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256060.1 1391971 D 668336 CDS YP_003256061.1 261868139 8537185 1392297..1393490 1 NC_013416.1 identified by Glimmer3; putative; exodeoxyribonuclease VII large subunit 1393490 8537185 D11S_1466 Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease VII large subunit YP_003256061.1 1392297 D 668336 CDS YP_003256062.1 261868140 8537186 1393497..1394831 1 NC_013416.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1394831 xseA 8537186 xseA Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease VII large subunit YP_003256062.1 1393497 D 668336 CDS YP_003256063.1 261868141 8537187 complement(1394837..1395691) 1 NC_013416.1 identified by Glimmer3; putative; ATPase 1395691 8537187 D11S_1468 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003256063.1 1394837 R 668336 CDS YP_003256064.1 261868142 8537188 complement(1395719..1396240) 1 NC_013416.1 identified by Glimmer3; putative; nitrogen regulatory IIA protein 1396240 8537188 D11S_1469 Aggregatibacter actinomycetemcomitans D11S-1 nitrogen regulatory IIA protein YP_003256064.1 1395719 R 668336 CDS YP_003256065.1 261868143 8537189 complement(1396244..1396969) 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter ATP-binding protein 1396969 8537189 D11S_1470 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter ATP-binding protein YP_003256065.1 1396244 R 668336 CDS YP_003256066.1 261868144 8537190 complement(1396975..1397493) 1 NC_013416.1 identified by Glimmer3; putative; lipopolysaccharide transport periplasmic protein LptA 1397493 8537190 D11S_1471 Aggregatibacter actinomycetemcomitans D11S-1 lipopolysaccharide transport periplasmic protein LptA YP_003256066.1 1396975 R 668336 CDS YP_003256067.1 261868145 8537191 complement(1397474..1398049) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1398049 8537191 D11S_1472 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256067.1 1397474 R 668336 CDS YP_003256068.1 261868146 8537192 1398333..1399130 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter ATPase 1399130 8537192 D11S_1473 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter ATPase YP_003256068.1 1398333 D 668336 CDS YP_003256069.1 261868147 8537193 1399124..1399909 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter permease 1399909 8537193 D11S_1474 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter permease YP_003256069.1 1399124 D 668336 CDS YP_003256070.1 261868148 8537194 1399932..1400441 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter periplasmic protein 1400441 8537194 D11S_1475 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter periplasmic protein YP_003256070.1 1399932 D 668336 CDS YP_003256071.1 261868149 8537195 1400470..1401111 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter 1401111 8537195 D11S_1476 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter YP_003256071.1 1400470 D 668336 CDS YP_003256072.1 261868150 8537196 1401115..1401450 1 NC_013416.1 identified by Glimmer3; putative; putative NTP binding protein, contains STAS domain 1401450 8537196 D11S_1477 Aggregatibacter actinomycetemcomitans D11S-1 putative NTP binding protein, contains STAS domain YP_003256072.1 1401115 D 668336 CDS YP_003256073.1 261868151 8537197 1401450..1401707 1 NC_013416.1 identified by Glimmer3; putative; BolA protein 1401707 8537197 D11S_1478 Aggregatibacter actinomycetemcomitans D11S-1 BolA protein YP_003256073.1 1401450 D 668336 CDS YP_003256074.1 261868152 8537198 1401724..1403001 1 NC_013416.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1403001 8537198 D11S_1479 Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003256074.1 1401724 D 668336 CDS YP_003256075.1 261868153 8537199 complement(1403063..1403353) 1 NC_013416.1 identified by Glimmer3; putative; DNA mismatch repair protein 1403353 8537199 D11S_1480 Aggregatibacter actinomycetemcomitans D11S-1 DNA mismatch repair protein YP_003256075.1 1403063 R 668336 CDS YP_003256076.1 261868154 8537200 1403556..1404986 1 NC_013416.1 identified by Glimmer3; putative; FadL protein 1404986 8537200 D11S_1481 Aggregatibacter actinomycetemcomitans D11S-1 FadL protein YP_003256076.1 1403556 D 668336 CDS YP_003256077.1 261868155 8537201 1405063..1405602 1 NC_013416.1 identified by Glimmer3; putative; methylated-DNA--protein-cysteine methyltransferase 1405602 8537201 D11S_1482 Aggregatibacter actinomycetemcomitans D11S-1 methylated-DNA--protein-cysteine methyltransferase YP_003256077.1 1405063 D 668336 CDS YP_003256078.1 261868156 8537202 1405599..1406267 1 NC_013416.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1406267 8537202 D11S_1483 Aggregatibacter actinomycetemcomitans D11S-1 DNA mismatch repair protein YP_003256078.1 1405599 D 668336 CDS YP_003256079.1 261868157 8537203 1406332..1407057 1 NC_013416.1 identified by Glimmer3; putative; protein YegH 1407057 8537203 D11S_1484 Aggregatibacter actinomycetemcomitans D11S-1 protein YegH YP_003256079.1 1406332 D 668336 CDS YP_003256080.1 261868158 8537204 complement(1407166..1408575) 1 NC_013416.1 identified by Glimmer3; putative; glutamine synthetase 1408575 8537204 D11S_1485 Aggregatibacter actinomycetemcomitans D11S-1 glutamine synthetase YP_003256080.1 1407166 R 668336 CDS YP_003256081.1 261868159 8537205 1408962..1410815 1 NC_013416.1 identified by Glimmer3; putative; TypA protein 1410815 8537205 D11S_1486 Aggregatibacter actinomycetemcomitans D11S-1 TypA protein YP_003256081.1 1408962 D 668336 CDS YP_003256082.1 261868160 8537206 complement(1410812..1410925) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1410925 8537206 D11S_1487 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256082.1 1410812 R 668336 CDS YP_003256083.1 261868161 8537207 1411041..1413551 1 NC_013416.1 identified by Glimmer3; putative; autotransporter adhesin 1413551 8537207 D11S_1488 Aggregatibacter actinomycetemcomitans D11S-1 autotransporter adhesin YP_003256083.1 1411041 D 668336 CDS YP_003256084.1 261868162 8537208 complement(1413615..1414079) 1 NC_013416.1 identified by Glimmer3; putative; peroxiredoxin Q 1414079 8537208 D11S_1489 Aggregatibacter actinomycetemcomitans D11S-1 peroxiredoxin Q YP_003256084.1 1413615 R 668336 CDS YP_003256085.1 261868163 8537209 1414237..1415130 1 NC_013416.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1415130 8537209 D11S_1490 Aggregatibacter actinomycetemcomitans D11S-1 dihydrodipicolinate synthase YP_003256085.1 1414237 D 668336 CDS YP_003256086.1 261868164 8537210 1415243..1416247 1 NC_013416.1 identified by Glimmer3; putative; NlpB protein 1416247 8537210 D11S_1491 Aggregatibacter actinomycetemcomitans D11S-1 NlpB protein YP_003256086.1 1415243 D 668336 CDS YP_003256087.1 261868165 8537211 1416382..1417893 1 NC_013416.1 identified by Glimmer3; putative; glycine betaine 1417893 8537211 D11S_1492 Aggregatibacter actinomycetemcomitans D11S-1 glycine betaine YP_003256087.1 1416382 D 668336 CDS YP_003256088.1 261868166 8537212 1418208..1419044 1 NC_013416.1 identified by Glimmer3; putative; glycine betaine transport ATP-binding protein opuAA 1419044 8537212 D11S_1493 Aggregatibacter actinomycetemcomitans D11S-1 glycine betaine transport ATP-binding protein opuAA YP_003256088.1 1418208 D 668336 CDS YP_003256089.1 261868167 8537213 complement(1419097..1419792) 1 NC_013416.1 identified by Glimmer3; putative; succinyl-diaminopimelate desuccinylase 1419792 8537213 D11S_1494 Aggregatibacter actinomycetemcomitans D11S-1 succinyl-diaminopimelate desuccinylase YP_003256089.1 1419097 R 668336 CDS YP_003256090.1 261868168 8537214 complement(1419785..1421173) 1 NC_013416.1 identified by Glimmer3; putative; putative nicotinate phosphoribosyltransferase 1421173 8537214 D11S_1495 Aggregatibacter actinomycetemcomitans D11S-1 putative nicotinate phosphoribosyltransferase YP_003256090.1 1419785 R 668336 CDS YP_003256091.1 261868169 8537215 1421312..1421443 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1421443 8537215 D11S_1496 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256091.1 1421312 D 668336 CDS YP_003256092.1 261868170 8537216 1421532..1423979 1 NC_013416.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 1423979 thrA 8537216 thrA Aggregatibacter actinomycetemcomitans D11S-1 bifunctional aspartokinase I/homoserine dehydrogenase I YP_003256092.1 1421532 D 668336 CDS YP_003256093.1 261868171 8537217 1423992..1424936 1 NC_013416.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 1424936 8537217 D11S_1498 Aggregatibacter actinomycetemcomitans D11S-1 homoserine kinase YP_003256093.1 1423992 D 668336 CDS YP_003256094.1 261868172 8537218 1424964..1425404 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1425404 8537218 D11S_1499 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256094.1 1424964 D 668336 CDS YP_003256095.1 261868173 8537219 1425460..1426734 1 NC_013416.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1426734 8537219 D11S_1500 Aggregatibacter actinomycetemcomitans D11S-1 threonine synthase YP_003256095.1 1425460 D 668336 CDS YP_003256096.1 261868174 8537220 1426793..1427512 1 NC_013416.1 identified by Glimmer3; putative; putative 4'-phosphopantetheinyl transferase 1427512 8537220 D11S_1501 Aggregatibacter actinomycetemcomitans D11S-1 putative 4'-phosphopantetheinyl transferase YP_003256096.1 1426793 D 668336 CDS YP_003256097.1 261868175 8537221 1427608..1428861 1 NC_013416.1 identified by Glimmer3; putative; HflK 1428861 8537221 D11S_1502 Aggregatibacter actinomycetemcomitans D11S-1 HflK YP_003256097.1 1427608 D 668336 CDS YP_003256098.1 261868176 8537222 1428861..1429748 1 NC_013416.1 identified by Glimmer3; putative; HflC protein 1429748 8537222 D11S_1503 Aggregatibacter actinomycetemcomitans D11S-1 HflC protein YP_003256098.1 1428861 D 668336 CDS YP_003256099.1 261868177 8537223 complement(1429881..1430036) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1430036 8537223 D11S_1504 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256099.1 1429881 R 668336 CDS YP_003256100.1 261868178 8537224 1430038..1430367 1 NC_013416.1 identified by Glimmer3; putative; ComE operon protein 1 1430367 8537224 D11S_1505 Aggregatibacter actinomycetemcomitans D11S-1 ComE operon protein 1 YP_003256100.1 1430038 D 668336 CDS YP_003256101.1 261868179 8537225 1430393..1431073 1 NC_013416.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; putative deoxyribonucleotide triphosphate pyrophosphatase 1431073 8537225 D11S_1506 Aggregatibacter actinomycetemcomitans D11S-1 putative deoxyribonucleotide triphosphate pyrophosphatase YP_003256101.1 1430393 D 668336 CDS YP_003256102.1 261868180 8537226 1431112..1431435 1 NC_013416.1 identified by Glimmer3; putative; protein YbjQ 1431435 8537226 D11S_1507 Aggregatibacter actinomycetemcomitans D11S-1 protein YbjQ YP_003256102.1 1431112 D 668336 CDS YP_003256103.1 261868181 8537227 1431435..1432604 1 NC_013416.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1432604 8537227 D11S_1508 Aggregatibacter actinomycetemcomitans D11S-1 coproporphyrinogen III oxidase YP_003256103.1 1431435 D 668336 CDS YP_003256104.1 261868182 8537228 1432703..1433359 1 NC_013416.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1433359 8537228 D11S_1509 Aggregatibacter actinomycetemcomitans D11S-1 ribose-5-phosphate isomerase A YP_003256104.1 1432703 D 668336 CDS YP_003256105.1 261868183 8537229 1433379..1434611 1 NC_013416.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1434611 8537229 D11S_1510 Aggregatibacter actinomycetemcomitans D11S-1 D-3-phosphoglycerate dehydrogenase YP_003256105.1 1433379 D 668336 CDS YP_003256106.1 261868184 8537230 1434620..1434739 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1434739 8537230 D11S_1511 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256106.1 1434620 D 668336 CDS YP_003256107.1 261868185 8537231 1434921..1435967 1 NC_013416.1 identified by Glimmer3; putative; iron chelatin ABC transporter periplasmic-binding protein 1435967 8537231 D11S_1512 Aggregatibacter actinomycetemcomitans D11S-1 iron chelatin ABC transporter periplasmic-binding protein YP_003256107.1 1434921 D 668336 CDS YP_003256108.1 261868186 8537232 1436157..1437140 1 NC_013416.1 identified by Glimmer3; putative; TRAP dicarboxylate transporter subunit DctM 1437140 8537232 D11S_1513 Aggregatibacter actinomycetemcomitans D11S-1 TRAP dicarboxylate transporter subunit DctM YP_003256108.1 1436157 D 668336 CDS YP_003256109.1 261868187 8537233 1437164..1439539 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1439539 8537233 D11S_1514 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256109.1 1437164 D 668336 CDS YP_003256110.1 261868188 8537234 1439554..1440309 1 NC_013416.1 identified by Glimmer3; putative; D-mannonate oxidoreductase 1440309 8537234 D11S_1515 Aggregatibacter actinomycetemcomitans D11S-1 D-mannonate oxidoreductase YP_003256110.1 1439554 D 668336 CDS YP_003256111.1 261868189 8537235 1440329..1441513 1 NC_013416.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1441513 8537235 D11S_1516 Aggregatibacter actinomycetemcomitans D11S-1 mannonate dehydratase YP_003256111.1 1440329 D 668336 CDS YP_003256112.1 261868190 8537236 1441551..1442108 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1442108 8537236 D11S_1517 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256112.1 1441551 D 668336 CDS YP_003256113.1 261868191 8537237 1442158..1442481 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1442481 8537237 D11S_1518 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256113.1 1442158 D 668336 CDS YP_003256114.1 261868192 8537238 1442538..1443428 1 NC_013416.1 identified by Glimmer3; putative; RhaT protein 1443428 8537238 D11S_1519 Aggregatibacter actinomycetemcomitans D11S-1 RhaT protein YP_003256114.1 1442538 D 668336 CDS YP_003256115.1 261868193 8537239 complement(1443454..1445208) 1 NC_013416.1 putative role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; putative sulfate transporter YchM 1445208 8537239 D11S_1520 Aggregatibacter actinomycetemcomitans D11S-1 putative sulfate transporter YchM YP_003256115.1 1443454 R 668336 CDS YP_003256116.1 261868194 8537241 1445639..1448056 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent protease La 1448056 8537241 D11S_1522 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent protease La YP_003256116.1 1445639 D 668336 CDS YP_003256117.1 261868195 8537242 complement(1448118..1449968) 1 NC_013416.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 1449968 8537242 D11S_1523 Aggregatibacter actinomycetemcomitans D11S-1 RNA polymerase sigma factor RpoD YP_003256117.1 1448118 R 668336 CDS YP_003256118.1 261868196 8537243 complement(1450044..1451801) 1 NC_013416.1 synthesizes RNA primers at the replication forks; DNA primase 1451801 dnaG 8537243 dnaG Aggregatibacter actinomycetemcomitans D11S-1 DNA primase YP_003256118.1 1450044 R 668336 CDS YP_003256119.1 261868197 8537244 complement(1451923..1452138) 1 NC_013416.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1452138 rpsU 8537244 rpsU Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S21 YP_003256119.1 1451923 R 668336 CDS YP_003256120.1 261868198 8537245 1452173..1452340 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1452340 8537245 D11S_1526 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256120.1 1452173 D 668336 CDS YP_003256121.1 261868199 8537246 1452363..1453391 1 NC_013416.1 identified by Glimmer3; putative; O-sialoglycoprotein endopeptidase 1453391 8537246 D11S_1527 Aggregatibacter actinomycetemcomitans D11S-1 O-sialoglycoprotein endopeptidase YP_003256121.1 1452363 D 668336 CDS YP_003256122.1 261868200 8537247 1453456..1453689 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1453689 8537247 D11S_1528 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256122.1 1453456 D 668336 CDS YP_003256123.1 261868201 8537248 1453692..1454270 1 NC_013416.1 identified by Glimmer3; putative; thymidine kinase 1454270 8537248 D11S_1529 Aggregatibacter actinomycetemcomitans D11S-1 thymidine kinase YP_003256123.1 1453692 D 668336 CDS YP_003256124.1 261868202 8537249 complement(1454338..1456350) 1 NC_013416.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1456350 ligA 8537249 ligA Aggregatibacter actinomycetemcomitans D11S-1 NAD-dependent DNA ligase LigA YP_003256124.1 1454338 R 668336 CDS YP_003256125.1 261868203 8537250 complement(1456452..1457489) 1 NC_013416.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 1457489 8537250 D11S_1531 Aggregatibacter actinomycetemcomitans D11S-1 cell division protein ZipA YP_003256125.1 1456452 R 668336 CDS YP_003256126.1 261868204 8537251 1457629..1458453 1 NC_013416.1 putative role in sulfur assimilation; putative sulfate transport protein CysZ 1458453 8537251 D11S_1532 Aggregatibacter actinomycetemcomitans D11S-1 putative sulfate transport protein CysZ YP_003256126.1 1457629 D 668336 CDS YP_003256127.1 261868205 8537252 1458554..1459501 1 NC_013416.1 identified by Glimmer3; putative; cysteine synthase A 1459501 8537252 D11S_1533 Aggregatibacter actinomycetemcomitans D11S-1 cysteine synthase A YP_003256127.1 1458554 D 668336 CDS YP_003256128.1 261868206 8537253 complement(1459466..1459579) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1459579 8537253 D11S_1534 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256128.1 1459466 R 668336 CDS YP_003256129.1 261868207 8537254 complement(1459721..1459867) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1459867 8537254 D11S_1535 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256129.1 1459721 R 668336 CDS YP_003256130.1 261868208 8537255 complement(1459943..1460524) 1 NC_013416.1 identified by Glimmer3; putative; uracil-DNA glycosylase 1460524 8537255 D11S_1536 Aggregatibacter actinomycetemcomitans D11S-1 uracil-DNA glycosylase YP_003256130.1 1459943 R 668336 CDS YP_003256131.1 261868209 8537256 complement(1460833..1461924) 1 NC_013416.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1461924 8537256 D11S_1537 Aggregatibacter actinomycetemcomitans D11S-1 GTP-dependent nucleic acid-binding protein EngD YP_003256131.1 1460833 R 668336 CDS YP_003256132.1 261868210 8537257 complement(1462113..1462796) 1 NC_013416.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1462796 8537257 D11S_1538 Aggregatibacter actinomycetemcomitans D11S-1 peptidyl-tRNA hydrolase YP_003256132.1 1462113 R 668336 CDS YP_003256134.1 261868212 8537269 complement(1469570..1470643) 1 NC_013416.1 identified by Glimmer3; putative; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 1470643 8537269 D11S_1550 Aggregatibacter actinomycetemcomitans D11S-1 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase YP_003256134.1 1469570 R 668336 CDS YP_003256135.1 261868213 8537270 1470772..1472055 1 NC_013416.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 1472055 8537270 D11S_1551 Aggregatibacter actinomycetemcomitans D11S-1 glutamate-1-semialdehyde aminotransferase YP_003256135.1 1470772 D 668336 CDS YP_003256136.1 261868214 8537271 complement(1472131..1474722) 1 NC_013416.1 identified by Glimmer3; putative; PII uridylyl-transferase 1474722 glnD 8537271 glnD Aggregatibacter actinomycetemcomitans D11S-1 PII uridylyl-transferase YP_003256136.1 1472131 R 668336 CDS YP_003256137.1 261868215 8537272 complement(1474788..1475588) 1 NC_013416.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1475588 8537272 D11S_1553 Aggregatibacter actinomycetemcomitans D11S-1 methionine aminopeptidase YP_003256137.1 1474788 R 668336 CDS YP_003256138.1 261868216 8537273 1475722..1476063 1 NC_013416.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 1476063 8537273 D11S_1554 Aggregatibacter actinomycetemcomitans D11S-1 iron-sulfur cluster insertion protein ErpA YP_003256138.1 1475722 D 668336 CDS YP_003256139.1 261868217 8537274 1476065..1476277 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1476277 8537274 D11S_1555 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256139.1 1476065 D 668336 CDS YP_003256140.1 261868218 8537275 1476323..1478716 1 NC_013416.1 identified by Glimmer3; putative; penicillin-binding protein 1B 1478716 8537275 D11S_1556 Aggregatibacter actinomycetemcomitans D11S-1 penicillin-binding protein 1B YP_003256140.1 1476323 D 668336 CDS YP_003256141.1 261868219 8537276 1479015..1480922 1 NC_013416.1 identified by Glimmer3; putative; high-affinity Fe2+/Pb2+ permease 1480922 8537276 D11S_1557 Aggregatibacter actinomycetemcomitans D11S-1 high-affinity Fe2+/Pb2+ permease YP_003256141.1 1479015 D 668336 CDS YP_003256142.1 261868220 8537277 1480965..1481486 1 NC_013416.1 identified by Glimmer3; putative; periplasmic protein 1481486 8537277 D11S_1558 Aggregatibacter actinomycetemcomitans D11S-1 periplasmic protein YP_003256142.1 1480965 D 668336 CDS YP_003256143.1 261868221 8537278 1481625..1483055 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein 1483055 8537278 D11S_1559 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein YP_003256143.1 1481625 D 668336 CDS YP_003256144.1 261868222 8537279 1483058..1484383 1 NC_013416.1 identified by Glimmer3; putative; membrane protein 1484383 8537279 D11S_1560 Aggregatibacter actinomycetemcomitans D11S-1 membrane protein YP_003256144.1 1483058 D 668336 CDS YP_003256145.1 261868223 8537280 1484394..1485509 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein-permease 1485509 8537280 D11S_1561 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein-permease YP_003256145.1 1484394 D 668336 CDS YP_003256146.1 261868224 8537281 1485511..1486182 1 NC_013416.1 identified by Glimmer3; putative; macrolide export ATP-binding/permease MacB 1486182 8537281 D11S_1562 Aggregatibacter actinomycetemcomitans D11S-1 macrolide export ATP-binding/permease MacB YP_003256146.1 1485511 D 668336 CDS YP_003256147.1 261868225 8537282 1486172..1486663 1 NC_013416.1 identified by Glimmer3; putative; ResA 1486663 8537282 D11S_1563 Aggregatibacter actinomycetemcomitans D11S-1 ResA YP_003256147.1 1486172 D 668336 CDS YP_003256148.1 261868226 8537283 1486670..1486981 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-553 1486981 8537283 D11S_1564 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-553 YP_003256148.1 1486670 D 668336 CDS YP_003256149.1 261868227 8537284 1487309..1487974 1 NC_013416.1 identified by Glimmer3; putative; putative phosphatase 1487974 8537284 D11S_1565 Aggregatibacter actinomycetemcomitans D11S-1 putative phosphatase YP_003256149.1 1487309 D 668336 CDS YP_003256150.1 261868228 8537285 complement(1487980..1488138) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1488138 8537285 D11S_1566 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256150.1 1487980 R 668336 CDS YP_003256151.1 261868229 8537286 complement(1488166..1489314) 1 NC_013416.1 identified by Glimmer3; putative; transposase (IS4 family) protein 1489314 8537286 D11S_1567 Aggregatibacter actinomycetemcomitans D11S-1 transposase (IS4 family) protein YP_003256151.1 1488166 R 668336 CDS YP_003256152.1 261868230 8537287 complement(1489414..1490466) 1 NC_013416.1 identified by Glimmer3; putative; putative inner membrane protein 1490466 8537287 D11S_1568 Aggregatibacter actinomycetemcomitans D11S-1 putative inner membrane protein YP_003256152.1 1489414 R 668336 CDS YP_003256153.1 261868231 8537288 complement(1490774..1494685) 1 NC_013416.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 1494685 8537288 D11S_1569 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent RNA helicase HrpA YP_003256153.1 1490774 R 668336 CDS YP_003256154.1 261868232 8537289 complement(1494682..1495071) 1 NC_013416.1 identified by Glimmer3; putative; membrane protein 1495071 8537289 D11S_1570 Aggregatibacter actinomycetemcomitans D11S-1 membrane protein YP_003256154.1 1494682 R 668336 CDS YP_003256155.1 261868233 8537290 complement(1495072..1495524) 1 NC_013416.1 identified by Glimmer3; putative; membrane protein YtwI 1495524 8537290 D11S_1571 Aggregatibacter actinomycetemcomitans D11S-1 membrane protein YtwI YP_003256155.1 1495072 R 668336 CDS YP_003256156.1 261868234 8537291 complement(1495649..1495978) 1 NC_013416.1 identified by Glimmer3; putative; putative glutaredoxin-like protein 1495978 8537291 D11S_1572 Aggregatibacter actinomycetemcomitans D11S-1 putative glutaredoxin-like protein YP_003256156.1 1495649 R 668336 CDS YP_003256157.1 261868235 8537292 complement(1496320..1497360) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein A 1497360 8537292 D11S_1573 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein A YP_003256157.1 1496320 R 668336 CDS YP_003256158.1 261868236 8537293 1497846..1500899 1 NC_013416.1 identified by Glimmer3; putative; FAD linked oxidase 1500899 8537293 D11S_1574 Aggregatibacter actinomycetemcomitans D11S-1 FAD linked oxidase YP_003256158.1 1497846 D 668336 CDS YP_003256159.1 261868237 8537294 1500909..1501331 1 NC_013416.1 identified by Glimmer3; putative; esterase YdiI 1501331 8537294 D11S_1575 Aggregatibacter actinomycetemcomitans D11S-1 esterase YdiI YP_003256159.1 1500909 D 668336 CDS YP_003256160.1 261868238 8537295 1501324..1502388 1 NC_013416.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1502388 hemH 8537295 hemH Aggregatibacter actinomycetemcomitans D11S-1 ferrochelatase YP_003256160.1 1501324 D 668336 CDS YP_003256161.1 261868239 8537296 1502429..1502929 1 NC_013416.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 1502929 tpx 8537296 tpx Aggregatibacter actinomycetemcomitans D11S-1 thiol peroxidase YP_003256161.1 1502429 D 668336 CDS YP_003256162.1 261868240 8537297 complement(1503134..1504279) 1 NC_013416.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 1504279 nagA 8537297 nagA Aggregatibacter actinomycetemcomitans D11S-1 N-acetylglucosamine-6-phosphate deacetylase YP_003256162.1 1503134 R 668336 CDS YP_003256163.1 261868241 8537298 complement(1504335..1505138) 1 NC_013416.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 1505138 nagB 8537298 nagB Aggregatibacter actinomycetemcomitans D11S-1 glucosamine-6-phosphate deaminase YP_003256163.1 1504335 R 668336 CDS YP_003256164.1 261868242 8537299 complement(1505293..1506171) 1 NC_013416.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; N-acetylneuraminate lyase 1506171 8537299 D11S_1580 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylneuraminate lyase YP_003256164.1 1505293 R 668336 CDS YP_003256165.1 261868243 8537300 complement(1506181..1507050) 1 NC_013416.1 identified by Glimmer3; putative; N-acetylmannosamine kinase 1507050 8537300 D11S_1581 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylmannosamine kinase YP_003256165.1 1506181 R 668336 CDS YP_003256166.1 261868244 8537301 complement(1507060..1507947) 1 NC_013416.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; N-acetylmannosamine kinase 1507947 8537301 D11S_1582 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylmannosamine kinase YP_003256166.1 1507060 R 668336 CDS YP_003256167.1 261868245 8537302 complement(1507961..1508662) 1 NC_013416.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; N-acetylmannosamine-6-phosphate 2-epimerase 1508662 8537302 D11S_1583 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylmannosamine-6-phosphate 2-epimerase YP_003256167.1 1507961 R 668336 CDS YP_003256168.1 261868246 8537303 1508903..1509889 1 NC_013416.1 identified by Glimmer3; putative; sialic acid-binding periplasmic protein SiaP 1509889 8537303 D11S_1584 Aggregatibacter actinomycetemcomitans D11S-1 sialic acid-binding periplasmic protein SiaP YP_003256168.1 1508903 D 668336 CDS YP_003256169.1 261868247 8537304 1509953..1511803 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1511803 8537304 D11S_1585 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256169.1 1509953 D 668336 CDS YP_003256170.1 261868248 8537305 1511942..1513072 1 NC_013416.1 identified by Glimmer3; putative; N-acetylneuraminic acid mutarotase 1513072 8537305 D11S_1586 Aggregatibacter actinomycetemcomitans D11S-1 N-acetylneuraminic acid mutarotase YP_003256170.1 1511942 D 668336 CDS YP_003256171.1 261868249 8537306 1513322..1514788 1 NC_013416.1 identified by Glimmer3; putative; PTS system N-acetylglucosamine-specific transporter subunit IIBC 1514788 8537306 D11S_1587 Aggregatibacter actinomycetemcomitans D11S-1 PTS system N-acetylglucosamine-specific transporter subunit IIBC YP_003256171.1 1513322 D 668336 CDS YP_003256172.1 261868250 8537307 complement(1515464..1516534) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein A 1516534 8537307 D11S_1588 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein A YP_003256172.1 1515464 R 668336 CDS YP_003256173.1 261868251 8537308 complement(1516761..1518803) 1 NC_013416.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1518803 8537308 D11S_1589 Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ABC subunit B YP_003256173.1 1516761 R 668336 CDS YP_003256174.1 261868252 8537310 complement(1519415..1520446) 1 NC_013416.1 identified by Glimmer3; putative; high-affinity nickel-transporter 1520446 8537310 D11S_1591 Aggregatibacter actinomycetemcomitans D11S-1 high-affinity nickel-transporter YP_003256174.1 1519415 R 668336 CDS YP_003256175.1 261868253 8537311 complement(1520461..1521126) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1521126 8537311 D11S_1592 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256175.1 1520461 R 668336 CDS YP_003256176.1 261868254 8537312 complement(1521144..1521290) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1521290 8537312 D11S_1593 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256176.1 1521144 R 668336 CDS YP_003256177.1 261868255 8537313 1521529..1523175 1 NC_013416.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; putative ABC transporter ATP-binding protein 1523175 8537313 D11S_1594 Aggregatibacter actinomycetemcomitans D11S-1 putative ABC transporter ATP-binding protein YP_003256177.1 1521529 D 668336 CDS YP_003256178.1 261868256 8537314 complement(1523279..1524166) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 100 1524166 8537314 D11S_1595 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein 100 YP_003256178.1 1523279 R 668336 CDS YP_003256179.1 261868257 8537315 1524669..1526567 1 NC_013416.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1526567 8537315 D11S_1596 Aggregatibacter actinomycetemcomitans D11S-1 DNA topoisomerase IV subunit B YP_003256179.1 1524669 D 668336 CDS YP_003256180.1 261868258 8537316 1526920..1527096 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1527096 8537316 D11S_1597 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256180.1 1526920 D 668336 CDS YP_003256181.1 261868259 8537317 1527104..1529359 1 NC_013416.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1529359 8537317 D11S_1598 Aggregatibacter actinomycetemcomitans D11S-1 DNA topoisomerase IV subunit A YP_003256181.1 1527104 D 668336 CDS YP_003256182.1 261868260 8537318 1529643..1530254 1 NC_013416.1 identified by Glimmer3; putative; glutathione S-transferase 1530254 8537318 D11S_1599 Aggregatibacter actinomycetemcomitans D11S-1 glutathione S-transferase YP_003256182.1 1529643 D 668336 CDS YP_003256183.1 261868261 8537319 complement(1530304..1531014) 1 NC_013416.1 identified by Glimmer3; putative; Sel1 domain-containing protein 1531014 8537319 D11S_1600 Aggregatibacter actinomycetemcomitans D11S-1 Sel1 domain-containing protein YP_003256183.1 1530304 R 668336 CDS YP_003256184.1 261868262 8537320 complement(1531020..1531736) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1531736 8537320 D11S_1601 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256184.1 1531020 R 668336 CDS YP_003256185.1 261868263 8537321 1531838..1532191 1 NC_013416.1 identified by Glimmer3; putative; putative translation initiation inhibitor 1532191 8537321 D11S_1602 Aggregatibacter actinomycetemcomitans D11S-1 putative translation initiation inhibitor YP_003256185.1 1531838 D 668336 CDS YP_003256186.1 261868264 8537322 complement(1532261..1533106) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1533106 8537322 D11S_1603 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256186.1 1532261 R 668336 CDS YP_003256187.1 261868265 8537323 complement(1533324..1533779) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1533779 8537323 D11S_1604 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256187.1 1533324 R 668336 CDS YP_003256188.1 261868266 8537324 complement(1533782..1534552) 1 NC_013416.1 identified by Glimmer3; putative; Ribonuclease III 1534552 8537324 D11S_1605 Aggregatibacter actinomycetemcomitans D11S-1 Ribonuclease III YP_003256188.1 1533782 R 668336 CDS YP_003256189.1 261868267 8537325 complement(1534878..1535768) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1535768 8537325 D11S_1606 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256189.1 1534878 R 668336 CDS YP_003256190.1 261868268 8537326 complement(1535771..1536295) 1 NC_013416.1 identified by Glimmer3; putative; DNA polymerase III subunit tau 1536295 8537326 D11S_1607 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit tau YP_003256190.1 1535771 R 668336 CDS YP_003256191.1 261868269 8537327 complement(1536412..1537815) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1537815 8537327 D11S_1608 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256191.1 1536412 R 668336 CDS YP_003256192.1 261868270 8537328 complement(1537848..1538459) 1 NC_013416.1 identified by Glimmer3; putative; adenine phosphoribosyltransferase 1538459 8537328 D11S_1609 Aggregatibacter actinomycetemcomitans D11S-1 adenine phosphoribosyltransferase YP_003256192.1 1537848 R 668336 CDS YP_003256193.1 261868271 8537329 complement(1538481..1539437) 1 NC_013416.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1539437 8537329 D11S_1610 Aggregatibacter actinomycetemcomitans D11S-1 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_003256193.1 1538481 R 668336 CDS YP_003256194.1 261868272 8537330 complement(1539553..1540320) 1 NC_013416.1 identified by Glimmer3; putative; inner membrane protein YfcA 1540320 8537330 D11S_1611 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane protein YfcA YP_003256194.1 1539553 R 668336 CDS YP_003256195.1 261868273 8537331 complement(1540324..1541196) 1 NC_013416.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 1541196 mepA 8537331 mepA Aggregatibacter actinomycetemcomitans D11S-1 penicillin-insensitive murein endopeptidase YP_003256195.1 1540324 R 668336 CDS YP_003256196.1 261868274 8537332 complement(1541218..1542291) 1 NC_013416.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1542291 8537332 D11S_1613 Aggregatibacter actinomycetemcomitans D11S-1 chorismate synthase YP_003256196.1 1541218 R 668336 CDS YP_003256197.1 261868275 8537333 complement(1542313..1545636) 1 NC_013416.1 small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer; maintains cell turgor through accumulation and release of potassium; large protein class of MscS; potassium efflux protein KefA 1545636 8537333 D11S_1614 Aggregatibacter actinomycetemcomitans D11S-1 potassium efflux protein KefA YP_003256197.1 1542313 R 668336 CDS YP_003256198.1 261868276 8537334 complement(1545645..1547060) 1 NC_013416.1 identified by Glimmer3; putative; O-succinylbenzoic acid--CoA ligase 1547060 8537334 D11S_1615 Aggregatibacter actinomycetemcomitans D11S-1 O-succinylbenzoic acid--CoA ligase YP_003256198.1 1545645 R 668336 CDS YP_003256199.1 261868277 8537335 complement(1547066..1547683) 1 NC_013416.1 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 1547683 8537335 D11S_1616 Aggregatibacter actinomycetemcomitans D11S-1 replication initiation regulator SeqA YP_003256199.1 1547066 R 668336 CDS YP_003256200.1 261868278 8537336 1547770..1548570 1 NC_013416.1 identified by Glimmer3; putative; esterase YbfF 1548570 8537336 D11S_1617 Aggregatibacter actinomycetemcomitans D11S-1 esterase YbfF YP_003256200.1 1547770 D 668336 CDS YP_003256201.1 261868279 8537337 1549002..1549526 1 NC_013416.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1549526 8537337 D11S_1618 Aggregatibacter actinomycetemcomitans D11S-1 flavodoxin FldA YP_003256201.1 1549002 D 668336 CDS YP_003256202.1 261868280 8537338 1549545..1549985 1 NC_013416.1 identified by Glimmer3; putative; ferric uptake regulation protein 1549985 8537338 D11S_1619 Aggregatibacter actinomycetemcomitans D11S-1 ferric uptake regulation protein YP_003256202.1 1549545 D 668336 CDS YP_003256203.1 261868281 8537339 1550153..1552816 1 NC_013416.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1552816 8537339 D11S_1620 Aggregatibacter actinomycetemcomitans D11S-1 DNA gyrase subunit A YP_003256203.1 1550153 D 668336 CDS YP_003256204.1 261868282 8537340 1552884..1553234 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1553234 8537340 D11S_1621 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256204.1 1552884 D 668336 CDS YP_003256205.1 261868283 8537341 complement(1553268..1553585) 1 NC_013416.1 identified by Glimmer3; putative; translation initiation factor Sui1 1553585 8537341 D11S_1622 Aggregatibacter actinomycetemcomitans D11S-1 translation initiation factor Sui1 YP_003256205.1 1553268 R 668336 CDS YP_003256206.1 261868284 8537342 complement(1553591..1554283) 1 NC_013416.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 1554283 8537342 D11S_1623 Aggregatibacter actinomycetemcomitans D11S-1 orotidine 5'-phosphate decarboxylase YP_003256206.1 1553591 R 668336 CDS YP_003256207.1 261868285 8537343 complement(1554313..1555503) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1555503 8537343 D11S_1624 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256207.1 1554313 R 668336 CDS YP_003256208.1 261868286 8537344 complement(1555503..1555799) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1555799 8537344 D11S_1625 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256208.1 1555503 R 668336 CDS YP_003256209.1 261868287 8537345 complement(1555898..1556185) 1 NC_013416.1 identified by Glimmer3; putative; integration host factor subunit beta 1556185 8537345 D11S_1626 Aggregatibacter actinomycetemcomitans D11S-1 integration host factor subunit beta YP_003256209.1 1555898 R 668336 CDS YP_003256210.1 261868288 8537346 complement(1556247..1557893) 1 NC_013416.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1557893 rpsA 8537346 rpsA Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S1 YP_003256210.1 1556247 R 668336 CDS YP_003256211.1 261868289 8537347 complement(1557991..1558668) 1 NC_013416.1 identified by Glimmer3; putative; cytidylate kinase 1558668 8537347 D11S_1628 Aggregatibacter actinomycetemcomitans D11S-1 cytidylate kinase YP_003256211.1 1557991 R 668336 CDS YP_003256212.1 261868290 8537348 complement(1558661..1559554) 1 NC_013416.1 identified by Glimmer3; putative; coproporphyrinogen III oxidase 1559554 8537348 D11S_1629 Aggregatibacter actinomycetemcomitans D11S-1 coproporphyrinogen III oxidase YP_003256212.1 1558661 R 668336 CDS YP_003256213.1 261868291 8537349 1559847..1562213 1 NC_013416.1 identified by Glimmer3; putative; TonB-dependent receptor 1562213 8537349 D11S_1630 Aggregatibacter actinomycetemcomitans D11S-1 TonB-dependent receptor YP_003256213.1 1559847 D 668336 CDS YP_003256214.1 261868292 8537350 1562291..1565065 1 NC_013416.1 identified by Glimmer3; putative; PqqL 1565065 8537350 D11S_1631 Aggregatibacter actinomycetemcomitans D11S-1 PqqL YP_003256214.1 1562291 D 668336 CDS YP_003256215.1 261868293 8537351 complement(1565132..1565464) 1 NC_013416.1 identified by Glimmer3; putative; branched-chain amino acid transport protein AzlD 1565464 8537351 D11S_1632 Aggregatibacter actinomycetemcomitans D11S-1 branched-chain amino acid transport protein AzlD YP_003256215.1 1565132 R 668336 CDS YP_003256216.1 261868294 8537352 complement(1565465..1566076) 1 NC_013416.1 identified by Glimmer3; putative; azaleucine resistance protein AzlC 1566076 8537352 D11S_1633 Aggregatibacter actinomycetemcomitans D11S-1 azaleucine resistance protein AzlC YP_003256216.1 1565465 R 668336 CDS YP_003256217.1 261868295 8537353 complement(1566073..1566192) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1566192 8537353 D11S_1634 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256217.1 1566073 R 668336 CDS YP_003256218.1 261868296 8537354 complement(1566197..1567129) 1 NC_013416.1 identified by Glimmer3; putative; MetR 1567129 8537354 D11S_1635 Aggregatibacter actinomycetemcomitans D11S-1 MetR YP_003256218.1 1566197 R 668336 CDS YP_003256219.1 261868297 8537355 1567429..1569702 1 NC_013416.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 1569702 8537355 D11S_1636 Aggregatibacter actinomycetemcomitans D11S-1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_003256219.1 1567429 D 668336 CDS YP_003256220.1 261868298 8537356 complement(1570133..1572100) 1 NC_013416.1 identified by Glimmer3; putative; putative DEAD/DEAH box helicase 1572100 8537356 D11S_1637 Aggregatibacter actinomycetemcomitans D11S-1 putative DEAD/DEAH box helicase YP_003256220.1 1570133 R 668336 CDS YP_003256221.1 261868299 8537357 complement(1572197..1572376) 1 NC_013416.1 identified by Glimmer3; putative; CRISPR-associated helicase Cas3 domain-containing protein 1572376 8537357 D11S_1638 Aggregatibacter actinomycetemcomitans D11S-1 CRISPR-associated helicase Cas3 domain-containing protein YP_003256221.1 1572197 R 668336 CDS YP_003256222.1 261868300 8537358 1572930..1573592 1 NC_013416.1 identified by Glimmer3; putative; inner membrane protein YccA 1573592 8537358 D11S_1639 Aggregatibacter actinomycetemcomitans D11S-1 inner membrane protein YccA YP_003256222.1 1572930 D 668336 CDS YP_003256223.1 261868301 8537359 1573678..1574007 1 NC_013416.1 identified by Glimmer3; putative; sulfurtransferase TusE 1574007 8537359 D11S_1640 Aggregatibacter actinomycetemcomitans D11S-1 sulfurtransferase TusE YP_003256223.1 1573678 D 668336 CDS YP_003256224.1 261868302 8537360 1574105..1574986 1 NC_013416.1 identified by Glimmer3; putative; AfeA 1574986 8537360 D11S_1641 Aggregatibacter actinomycetemcomitans D11S-1 AfeA YP_003256224.1 1574105 D 668336 CDS YP_003256225.1 261868303 8537361 1574986..1575876 1 NC_013416.1 identified by Glimmer3; putative; AfeB 1575876 8537361 D11S_1642 Aggregatibacter actinomycetemcomitans D11S-1 AfeB YP_003256225.1 1574986 D 668336 CDS YP_003256226.1 261868304 8537362 1575876..1576733 1 NC_013416.1 identified by Glimmer3; putative; AfeC 1576733 8537362 D11S_1643 Aggregatibacter actinomycetemcomitans D11S-1 AfeC YP_003256226.1 1575876 D 668336 CDS YP_003256227.1 261868305 8537363 1576730..1577578 1 NC_013416.1 identified by Glimmer3; putative; acylphosphatase 1577578 8537363 D11S_1644 Aggregatibacter actinomycetemcomitans D11S-1 acylphosphatase YP_003256227.1 1576730 D 668336 CDS YP_003256228.1 261868306 8537364 complement(1577553..1577825) 1 NC_013416.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1577825 8537364 D11S_1645 Aggregatibacter actinomycetemcomitans D11S-1 acylphosphatase YP_003256228.1 1577553 R 668336 CDS YP_003256229.1 261868307 8537365 1577970..1578644 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1578644 8537365 D11S_1646 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256229.1 1577970 D 668336 CDS YP_003256230.1 261868308 8537366 1578707..1579165 1 NC_013416.1 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 1579165 mgsA 8537366 mgsA Aggregatibacter actinomycetemcomitans D11S-1 methylglyoxal synthase YP_003256230.1 1578707 D 668336 CDS YP_003256231.1 261868309 8537367 1579165..1579638 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1579638 8537367 D11S_1648 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256231.1 1579165 D 668336 CDS YP_003256232.1 261868310 8537368 1579647..1581788 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1581788 8537368 D11S_1649 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256232.1 1579647 D 668336 CDS YP_003256233.1 261868311 8537369 complement(1581785..1582117) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1582117 8537369 D11S_1650 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256233.1 1581785 R 668336 CDS YP_003256234.1 261868312 8537370 complement(1582131..1582292) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1582292 8537370 D11S_1651 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256234.1 1582131 R 668336 CDS YP_003256235.1 261868313 8537371 1582355..1583305 1 NC_013416.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1583305 8537371 D11S_1652 Aggregatibacter actinomycetemcomitans D11S-1 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_003256235.1 1582355 D 668336 CDS YP_003256236.1 261868314 8537372 complement(1583472..1584416) 1 NC_013416.1 identified by Glimmer3; putative; transketolase, central region 1584416 8537372 D11S_1653 Aggregatibacter actinomycetemcomitans D11S-1 transketolase, central region YP_003256236.1 1583472 R 668336 CDS YP_003256237.1 261868315 8537373 complement(1584406..1585230) 1 NC_013416.1 identified by Glimmer3; putative; transketolase, N- subunit 1585230 8537373 D11S_1654 Aggregatibacter actinomycetemcomitans D11S-1 transketolase, N- subunit YP_003256237.1 1584406 R 668336 CDS YP_003256238.1 261868316 8537374 complement(1585240..1586448) 1 NC_013416.1 identified by Glimmer3; putative; ascorbate-specific PTS system enzyme IIC 1586448 8537374 D11S_1655 Aggregatibacter actinomycetemcomitans D11S-1 ascorbate-specific PTS system enzyme IIC YP_003256238.1 1585240 R 668336 CDS YP_003256239.1 261868317 8537375 complement(1586457..1586594) 1 NC_013416.1 identified by Glimmer3; putative; ascorbate-specific PTS system enzyme IIC 1586594 8537375 D11S_1656 Aggregatibacter actinomycetemcomitans D11S-1 ascorbate-specific PTS system enzyme IIC YP_003256239.1 1586457 R 668336 CDS YP_003256240.1 261868318 8537376 complement(1586611..1586880) 1 NC_013416.1 identified by Glimmer3; putative; PTS system galactitol-specific transporter subunit IIB 1586880 8537376 D11S_1657 Aggregatibacter actinomycetemcomitans D11S-1 PTS system galactitol-specific transporter subunit IIB YP_003256240.1 1586611 R 668336 CDS YP_003256241.1 261868319 8537377 complement(1587110..1588108) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1588108 8537377 D11S_1658 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256241.1 1587110 R 668336 CDS YP_003256242.1 261868320 8537378 complement(1588369..1590312) 1 NC_013416.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 1590312 8537378 D11S_1659 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter ATPase YP_003256242.1 1588369 R 668336 CDS YP_003256243.1 261868321 8537379 complement(1590354..1591706) 1 NC_013416.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1591706 8537379 D11S_1660 Aggregatibacter actinomycetemcomitans D11S-1 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_003256243.1 1590354 R 668336 CDS YP_003256244.1 261868322 8537380 complement(1591708..1592400) 1 NC_013416.1 identified by Glimmer3; putative; deoxyguanosinetriphosphate triphosphohydrolase-like protein 1592400 8537380 D11S_1661 Aggregatibacter actinomycetemcomitans D11S-1 deoxyguanosinetriphosphate triphosphohydrolase-like protein YP_003256244.1 1591708 R 668336 CDS YP_003256245.1 261868323 8537381 complement(1592400..1592810) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1592810 8537381 D11S_1662 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256245.1 1592400 R 668336 CDS YP_003256246.1 261868324 8537383 1593229..1593729 1 NC_013416.1 identified by Glimmer3; putative; protein ParB 1593729 8537383 D11S_1664 Aggregatibacter actinomycetemcomitans D11S-1 protein ParB YP_003256246.1 1593229 D 668336 CDS YP_003256247.1 261868325 8537384 1593735..1594931 1 NC_013416.1 identified by Glimmer3; putative; aminotransferase, class-V 1594931 8537384 D11S_1665 Aggregatibacter actinomycetemcomitans D11S-1 aminotransferase, class-V YP_003256247.1 1593735 D 668336 CDS YP_003256248.1 261868326 8537385 1594928..1595308 1 NC_013416.1 identified by Glimmer3; putative; Fe-S metabolism associated domain subfamily 1595308 8537385 D11S_1666 Aggregatibacter actinomycetemcomitans D11S-1 Fe-S metabolism associated domain subfamily YP_003256248.1 1594928 D 668336 CDS YP_003256249.1 261868327 8537386 complement(1595352..1596782) 1 NC_013416.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 1596782 8537386 D11S_1667 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_003256249.1 1595352 R 668336 CDS YP_003256250.1 261868328 8537387 1596896..1597831 1 NC_013416.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1597831 8537387 D11S_1668 Aggregatibacter actinomycetemcomitans D11S-1 lipid A biosynthesis lauroyl acyltransferase YP_003256250.1 1596896 D 668336 CDS YP_003256251.1 261868329 8537388 complement(1597889..1598452) 1 NC_013416.1 identified by Glimmer3; putative; TorD protein 1598452 8537388 D11S_1669 Aggregatibacter actinomycetemcomitans D11S-1 TorD protein YP_003256251.1 1597889 R 668336 CDS YP_003256252.1 261868330 8537389 complement(1598452..1599063) 1 NC_013416.1 identified by Glimmer3; putative; NAD dehydrogenase 1599063 8537389 D11S_1670 Aggregatibacter actinomycetemcomitans D11S-1 NAD dehydrogenase YP_003256252.1 1598452 R 668336 CDS YP_003256253.1 261868331 8537390 complement(1599072..1599518) 1 NC_013416.1 identified by Glimmer3; putative; nodulation efficiency protein D 1599518 8537390 D11S_1671 Aggregatibacter actinomycetemcomitans D11S-1 nodulation efficiency protein D YP_003256253.1 1599072 R 668336 CDS YP_003256254.1 261868332 8537391 complement(1599542..1600468) 1 NC_013416.1 identified by Glimmer3; putative; HflC protein 1600468 8537391 D11S_1672 Aggregatibacter actinomycetemcomitans D11S-1 HflC protein YP_003256254.1 1599542 R 668336 CDS YP_003256255.1 261868333 8537392 complement(1600990..1601811) 1 NC_013416.1 identified by Glimmer3; putative; putative glucanotransferase 1601811 8537392 D11S_1673 Aggregatibacter actinomycetemcomitans D11S-1 putative glucanotransferase YP_003256255.1 1600990 R 668336 CDS YP_003256256.1 261868334 8537393 1602320..1602511 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1602511 8537393 D11S_1674 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256256.1 1602320 D 668336 CDS YP_003256257.1 261868335 8537394 complement(1602584..1603006) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1603006 8537394 D11S_1675 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256257.1 1602584 R 668336 CDS YP_003256258.1 261868336 8537395 1603613..1604995 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c peroxidase 1604995 8537395 D11S_1676 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c peroxidase YP_003256258.1 1603613 D 668336 CDS YP_003256259.1 261868337 8537396 complement(1605083..1606240) 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease D 1606240 8537396 D11S_1677 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease D YP_003256259.1 1605083 R 668336 CDS YP_003256260.1 261868338 8537397 complement(1606323..1607999) 1 NC_013416.1 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 1607999 8537397 D11S_1678 Aggregatibacter actinomycetemcomitans D11S-1 long-chain-fatty-acid--CoA ligase YP_003256260.1 1606323 R 668336 CDS YP_003256261.1 261868339 8537398 complement(1608042..1608599) 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 1608599 8537398 D11S_1679 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein YP_003256261.1 1608042 R 668336 CDS YP_003256262.1 261868340 8537399 complement(1608632..1609354) 1 NC_013416.1 identified by Glimmer3; putative; putative M22 peptidase-like protein YeaZ 1609354 8537399 D11S_1680 Aggregatibacter actinomycetemcomitans D11S-1 putative M22 peptidase-like protein YeaZ YP_003256262.1 1608632 R 668336 CDS YP_003256263.1 261868341 8537400 complement(1609357..1611294) 1 NC_013416.1 identified by Glimmer3; putative; ATP-dependent helicase, dexd family 1611294 8537400 D11S_1681 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent helicase, dexd family YP_003256263.1 1609357 R 668336 CDS YP_003256264.1 261868342 8537401 1611370..1612188 1 NC_013416.1 identified by Glimmer3; putative; aldose 1-epimerase 1612188 8537401 D11S_1682 Aggregatibacter actinomycetemcomitans D11S-1 aldose 1-epimerase YP_003256264.1 1611370 D 668336 CDS YP_003256265.1 261868343 8537402 1612598..1613455 1 NC_013416.1 identified by Glimmer3; putative; thioredoxin domain-containing protein 1613455 8537402 D11S_1683 Aggregatibacter actinomycetemcomitans D11S-1 thioredoxin domain-containing protein YP_003256265.1 1612598 D 668336 CDS YP_003256266.1 261868344 8537403 1613515..1614468 1 NC_013416.1 identified by Glimmer3; putative; thioredoxin-disulfide reductase 1614468 8537403 D11S_1684 Aggregatibacter actinomycetemcomitans D11S-1 thioredoxin-disulfide reductase YP_003256266.1 1613515 D 668336 CDS YP_003256267.1 261868345 8537404 1614574..1616337 1 NC_013416.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1616337 8537404 D11S_1685 Aggregatibacter actinomycetemcomitans D11S-1 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_003256267.1 1614574 D 668336 CDS YP_003256268.1 261868346 8537405 1616337..1618070 1 NC_013416.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane/ATP-binding protein 1618070 8537405 D11S_1686 Aggregatibacter actinomycetemcomitans D11S-1 cysteine/glutathione ABC transporter membrane/ATP-binding protein YP_003256268.1 1616337 D 668336 CDS YP_003256269.1 261868347 8537406 complement(1618453..1618581) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1618581 8537406 D11S_1687 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256269.1 1618453 R 668336 CDS YP_003256270.1 261868348 8537407 complement(1618578..1619363) 1 NC_013416.1 identified by Glimmer3; putative; 30S ribosomal protein S15 1619363 8537407 D11S_1688 Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S15 YP_003256270.1 1618578 R 668336 CDS YP_003256271.1 261868349 8537408 complement(1619384..1620019) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1620019 8537408 D11S_1689 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256271.1 1619384 R 668336 CDS YP_003256272.1 261868350 8537409 1620107..1620691 1 NC_013416.1 identified by Glimmer3; putative; outer-membrane lipoprotein carrier protein 1620691 8537409 D11S_1690 Aggregatibacter actinomycetemcomitans D11S-1 outer-membrane lipoprotein carrier protein YP_003256272.1 1620107 D 668336 CDS YP_003256273.1 261868351 8537410 complement(1621469..1622383) 1 NC_013416.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; N-acetyl-D-glucosamine kinase 1622383 8537410 D11S_1691 Aggregatibacter actinomycetemcomitans D11S-1 N-acetyl-D-glucosamine kinase YP_003256273.1 1621469 R 668336 CDS YP_003256274.1 261868352 8537411 complement(1622433..1623161) 1 NC_013416.1 identified by Glimmer3; putative; phosphatidylglycerophosphatase B 1623161 8537411 D11S_1692 Aggregatibacter actinomycetemcomitans D11S-1 phosphatidylglycerophosphatase B YP_003256274.1 1622433 R 668336 CDS YP_003256275.1 261868353 8537412 1623250..1623903 1 NC_013416.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 1623903 ribA 8537412 ribA Aggregatibacter actinomycetemcomitans D11S-1 GTP cyclohydrolase II YP_003256275.1 1623250 D 668336 CDS YP_003256276.1 261868354 8537413 1624182..1624922 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1624922 8537413 D11S_1694 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256276.1 1624182 D 668336 CDS YP_003256277.1 261868355 8537414 complement(1625084..1625506) 1 NC_013416.1 identified by Glimmer3; putative; dTDP-glucose 4,6-dehydratase 1625506 8537414 D11S_1695 Aggregatibacter actinomycetemcomitans D11S-1 dTDP-glucose 4,6-dehydratase YP_003256277.1 1625084 R 668336 CDS YP_003256278.1 261868356 8537415 complement(1625569..1626111) 1 NC_013416.1 identified by Glimmer3; putative; dTDP-glucose 4,6-dehydratase 1626111 8537415 D11S_1696 Aggregatibacter actinomycetemcomitans D11S-1 dTDP-glucose 4,6-dehydratase YP_003256278.1 1625569 R 668336 CDS YP_003256279.1 261868357 8537416 complement(1626136..1626930) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1626930 8537416 D11S_1697 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256279.1 1626136 R 668336 CDS YP_003256280.1 261868358 8537417 complement(1626930..1627733) 1 NC_013416.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 1627733 8537417 D11S_1698 Aggregatibacter actinomycetemcomitans D11S-1 exonuclease III YP_003256280.1 1626930 R 668336 CDS YP_003256281.1 261868359 8537418 complement(1628274..1629692) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1629692 8537418 D11S_1699 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256281.1 1628274 R 668336 CDS YP_003256282.1 261868360 8537419 complement(1629655..1630611) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1630611 8537419 D11S_1700 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256282.1 1629655 R 668336 CDS YP_003256283.1 261868361 8537420 complement(1630621..1631493) 1 NC_013416.1 identified by Glimmer3; putative; glycosyltransferase 1631493 8537420 D11S_1701 Aggregatibacter actinomycetemcomitans D11S-1 glycosyltransferase YP_003256283.1 1630621 R 668336 CDS YP_003256284.1 261868362 8537421 complement(1631551..1632585) 1 NC_013416.1 identified by Glimmer3; putative; exopolysaccharide production protein EXOZ 1632585 8537421 D11S_1702 Aggregatibacter actinomycetemcomitans D11S-1 exopolysaccharide production protein EXOZ YP_003256284.1 1631551 R 668336 CDS YP_003256285.1 261868363 8537422 complement(1632589..1633401) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1633401 8537422 D11S_1703 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256285.1 1632589 R 668336 CDS YP_003256286.1 261868364 8537423 complement(1633406..1635304) 1 NC_013416.1 identified by Glimmer3; putative; lipopolysaccharide biosynthesis protein 1635304 8537423 D11S_1704 Aggregatibacter actinomycetemcomitans D11S-1 lipopolysaccharide biosynthesis protein YP_003256286.1 1633406 R 668336 CDS YP_003256287.1 261868365 8537424 complement(1635312..1636055) 1 NC_013416.1 identified by Glimmer3; putative; teichoic acids export ATP-binding protein TagH 1636055 8537424 D11S_1705 Aggregatibacter actinomycetemcomitans D11S-1 teichoic acids export ATP-binding protein TagH YP_003256287.1 1635312 R 668336 CDS YP_003256288.1 261868366 8537425 complement(1636061..1636846) 1 NC_013416.1 identified by Glimmer3; putative; ABC transporter integral membrane subunit 1636846 8537425 D11S_1706 Aggregatibacter actinomycetemcomitans D11S-1 ABC transporter integral membrane subunit YP_003256288.1 1636061 R 668336 CDS YP_003256289.1 261868367 8537426 complement(1636858..1637400) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1637400 8537426 D11S_1707 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256289.1 1636858 R 668336 CDS YP_003256290.1 261868368 8537427 complement(1637403..1638287) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1638287 8537427 D11S_1708 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256290.1 1637403 R 668336 CDS YP_003256291.1 261868369 8537428 complement(1638289..1639161) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1639161 8537428 D11S_1709 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256291.1 1638289 R 668336 CDS YP_003256292.1 261868370 8537429 complement(1639239..1640306) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1640306 8537429 D11S_1710 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256292.1 1639239 R 668336 CDS YP_003256293.1 261868371 8537430 complement(1640377..1641507) 1 NC_013416.1 identified by Glimmer3; putative; lytic transglycosylase 1641507 8537430 D11S_1711 Aggregatibacter actinomycetemcomitans D11S-1 lytic transglycosylase YP_003256293.1 1640377 R 668336 CDS YP_003256294.1 261868372 8537431 complement(1641509..1642318) 1 NC_013416.1 identified by Glimmer3; putative; amylovoran biosynthesis glycosyltransferase AmsE 1642318 8537431 D11S_1712 Aggregatibacter actinomycetemcomitans D11S-1 amylovoran biosynthesis glycosyltransferase AmsE YP_003256294.1 1641509 R 668336 CDS YP_003256295.1 261868373 8537432 complement(1642387..1643268) 1 NC_013416.1 identified by Glimmer3; putative; WcaA protein 1643268 8537432 D11S_1713 Aggregatibacter actinomycetemcomitans D11S-1 WcaA protein YP_003256295.1 1642387 R 668336 CDS YP_003256296.1 261868374 8537433 complement(1643268..1644461) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1644461 8537433 D11S_1714 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256296.1 1643268 R 668336 CDS YP_003256297.1 261868375 8537434 complement(1644470..1645246) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1645246 8537434 D11S_1715 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256297.1 1644470 R 668336 CDS YP_003256298.1 261868376 8537435 1645377..1646909 1 NC_013416.1 identified by Glimmer3; putative; polysaccharide biosynthesis protein 1646909 8537435 D11S_1716 Aggregatibacter actinomycetemcomitans D11S-1 polysaccharide biosynthesis protein YP_003256298.1 1645377 D 668336 CDS YP_003256299.1 261868377 8537436 1646906..1647862 1 NC_013416.1 identified by Glimmer3; putative; polysaccharide pyruvyl transferase YvfF 1647862 8537436 D11S_1717 Aggregatibacter actinomycetemcomitans D11S-1 polysaccharide pyruvyl transferase YvfF YP_003256299.1 1646906 D 668336 CDS YP_003256300.1 261868378 8537437 1647971..1648222 1 NC_013416.1 identified by Glimmer3; putative; Prevent-host-death protein 1648222 8537437 D11S_1718 Aggregatibacter actinomycetemcomitans D11S-1 Prevent-host-death protein YP_003256300.1 1647971 D 668336 CDS YP_003256301.1 261868379 8537438 1648219..1648473 1 NC_013416.1 identified by Glimmer3; putative; toxin 1648473 8537438 D11S_1719 Aggregatibacter actinomycetemcomitans D11S-1 toxin YP_003256301.1 1648219 D 668336 CDS YP_003256302.1 261868380 8537439 1648486..1649229 1 NC_013416.1 identified by Glimmer3; putative; molybdate ABC transporter permease 1649229 8537439 D11S_1720 Aggregatibacter actinomycetemcomitans D11S-1 molybdate ABC transporter permease YP_003256302.1 1648486 D 668336 CDS YP_003256303.1 261868381 8537440 1649202..1649363 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1649363 8537440 D11S_1721 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256303.1 1649202 D 668336 CDS YP_003256304.1 261868382 8537441 1649523..1650233 1 NC_013416.1 catalyzes the formation of a phosphodiester at the site of a single-strand break in duplex DNA; DNA ligase 1650233 8537441 D11S_1722 Aggregatibacter actinomycetemcomitans D11S-1 DNA ligase YP_003256304.1 1649523 D 668336 CDS YP_003256305.1 261868383 8537442 complement(1650366..1652540) 1 NC_013416.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 1652540 uvrD 8537442 uvrD Aggregatibacter actinomycetemcomitans D11S-1 DNA-dependent helicase II YP_003256305.1 1650366 R 668336 CDS YP_003256306.1 261868384 8537443 complement(1652708..1654057) 1 NC_013416.1 identified by Glimmer3; putative; gluconate permease 1654057 8537443 D11S_1724 Aggregatibacter actinomycetemcomitans D11S-1 gluconate permease YP_003256306.1 1652708 R 668336 CDS YP_003256307.1 261868385 8537444 1654275..1654793 1 NC_013416.1 identified by Glimmer3; putative; shikimate kinase 1654793 8537444 D11S_1725 Aggregatibacter actinomycetemcomitans D11S-1 shikimate kinase YP_003256307.1 1654275 D 668336 CDS YP_003256308.1 261868386 8537445 complement(1654790..1654912) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1654912 8537445 D11S_1726 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256308.1 1654790 R 668336 CDS YP_003256309.1 261868387 8537446 complement(1654863..1655861) 1 NC_013416.1 identified by Glimmer3; putative; PurR protein 1655861 8537446 D11S_1727 Aggregatibacter actinomycetemcomitans D11S-1 PurR protein YP_003256309.1 1654863 R 668336 CDS YP_003256310.1 261868388 8537447 complement(1655910..1656734) 1 NC_013416.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 1656734 8537447 D11S_1728 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase accessory protein YP_003256310.1 1655910 R 668336 CDS YP_003256311.1 261868389 8537448 1657042..1657194 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase subunit alpha 1657194 8537448 D11S_1729 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase subunit alpha YP_003256311.1 1657042 D 668336 CDS YP_003256312.1 261868390 8537449 1657271..1657588 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase subunit alpha 1657588 8537449 D11S_1730 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase subunit alpha YP_003256312.1 1657271 D 668336 CDS YP_003256313.1 261868391 8537450 1657637..1660066 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase subunit alpha 1660066 8537450 D11S_1731 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase subunit alpha YP_003256313.1 1657637 D 668336 CDS YP_003256314.1 261868392 8537451 1660068..1660994 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase accessory protein 1660994 8537451 D11S_1732 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase accessory protein YP_003256314.1 1660068 D 668336 CDS YP_003256315.1 261868393 8537452 1660987..1661700 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase subunit gamma 1661700 8537452 D11S_1733 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase subunit gamma YP_003256315.1 1660987 D 668336 CDS YP_003256316.1 261868394 8537453 1661857..1661973 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1661973 8537453 D11S_1734 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256316.1 1661857 D 668336 CDS YP_003256317.1 261868395 8537454 complement(1662328..1664613) 1 NC_013416.1 identified by Glimmer3; putative; [NiFe] hydrogenase maturation protein HypF 1664613 8537454 D11S_1735 Aggregatibacter actinomycetemcomitans D11S-1 [NiFe] hydrogenase maturation protein HypF YP_003256317.1 1662328 R 668336 CDS YP_003256318.1 261868396 8537455 1664909..1665508 1 NC_013416.1 identified by Glimmer3; putative; electron transport protein HydN 1665508 8537455 D11S_1736 Aggregatibacter actinomycetemcomitans D11S-1 electron transport protein HydN YP_003256318.1 1664909 D 668336 CDS YP_003256319.1 261868397 8537456 1665541..1665969 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit B 1665969 8537456 D11S_1737 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit B YP_003256319.1 1665541 D 668336 CDS YP_003256320.1 261868398 8537457 1665941..1667563 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit B 1667563 8537457 D11S_1738 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit B YP_003256320.1 1665941 D 668336 CDS YP_003256321.1 261868399 8537458 1667574..1668536 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit C 1668536 8537458 D11S_1739 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit C YP_003256321.1 1667574 D 668336 CDS YP_003256322.1 261868400 8537459 1668549..1669994 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit D 1669994 8537459 D11S_1740 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit D YP_003256322.1 1668549 D 668336 CDS YP_003256323.1 261868401 8537460 1670005..1670643 1 NC_013416.1 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit 1670643 hyfE 8537460 hyfE Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase 4 membrane subunit YP_003256323.1 1670005 D 668336 CDS YP_003256324.1 261868402 8537461 1670648..1672186 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit F 1672186 8537461 D11S_1742 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit F YP_003256324.1 1670648 D 668336 CDS YP_003256325.1 261868403 8537462 1672206..1673936 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit G 1673936 8537462 D11S_1743 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit G YP_003256325.1 1672206 D 668336 CDS YP_003256326.1 261868404 8537463 1673950..1674597 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit H 1674597 8537463 D11S_1744 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit H YP_003256326.1 1673950 D 668336 CDS YP_003256327.1 261868405 8537464 1674594..1675370 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit I 1675370 8537464 D11S_1745 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit I YP_003256327.1 1674594 D 668336 CDS YP_003256328.1 261868406 8537465 1675505..1675909 1 NC_013416.1 identified by Glimmer3; putative; hydrogenase-4 subunit J 1675909 8537465 D11S_1746 Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase-4 subunit J YP_003256328.1 1675505 D 668336 CDS YP_003256329.1 261868407 8537466 1675899..1676360 1 NC_013416.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 1676360 hycI 8537466 hycI Aggregatibacter actinomycetemcomitans D11S-1 hydrogenase 3 maturation protease YP_003256329.1 1675899 D 668336 CDS YP_003256330.1 261868408 8537467 1676952..1677377 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase H 1677377 8537467 D11S_1748 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase H YP_003256330.1 1676952 D 668336 CDS YP_003256331.1 261868409 8537468 1677426..1679111 1 NC_013416.1 identified by Glimmer3; putative; formate dehydrogenase subunit alpha 1679111 8537468 D11S_1749 Aggregatibacter actinomycetemcomitans D11S-1 formate dehydrogenase subunit alpha YP_003256331.1 1677426 D 668336 CDS YP_003256332.1 261868410 8537469 complement(1679282..1680154) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1680154 8537469 D11S_1750 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256332.1 1679282 R 668336 CDS YP_003256333.1 261868411 8537470 complement(1680165..1681334) 1 NC_013416.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1681334 sucC 8537470 sucC Aggregatibacter actinomycetemcomitans D11S-1 succinyl-CoA synthetase subunit beta YP_003256333.1 1680165 R 668336 CDS YP_003256334.1 261868412 8537471 complement(1681391..1681531) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1681531 8537471 D11S_1752 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256334.1 1681391 R 668336 CDS YP_003256335.1 261868413 8537472 complement(1681521..1682744) 1 NC_013416.1 identified by Glimmer3; putative; dihydrolipoyllysine-residue succinyltransferase 1682744 8537472 D11S_1753 Aggregatibacter actinomycetemcomitans D11S-1 dihydrolipoyllysine-residue succinyltransferase YP_003256335.1 1681521 R 668336 CDS YP_003256336.1 261868414 8537473 complement(1682870..1685677) 1 NC_013416.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1685677 sucA 8537473 sucA Aggregatibacter actinomycetemcomitans D11S-1 2-oxoglutarate dehydrogenase E1 component YP_003256336.1 1682870 R 668336 CDS YP_003256337.1 261868415 8537474 1685762..1685884 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1685884 8537474 D11S_1755 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256337.1 1685762 D 668336 CDS YP_003256338.1 261868416 8537475 complement(1685956..1686594) 1 NC_013416.1 identified by Glimmer3; putative; carboxy- protease 1686594 8537475 D11S_1756 Aggregatibacter actinomycetemcomitans D11S-1 carboxy- protease YP_003256338.1 1685956 R 668336 CDS YP_003256339.1 261868417 8537476 complement(1686671..1687117) 1 NC_013416.1 identified by Glimmer3; putative; twin-arginine translocation pathway signal 1687117 8537476 D11S_1757 Aggregatibacter actinomycetemcomitans D11S-1 twin-arginine translocation pathway signal YP_003256339.1 1686671 R 668336 CDS YP_003256340.1 261868418 8537477 complement(1687296..1688804) 1 NC_013416.1 identified by Glimmer3; putative; periplasmic protein 1688804 8537477 D11S_1758 Aggregatibacter actinomycetemcomitans D11S-1 periplasmic protein YP_003256340.1 1687296 R 668336 CDS YP_003256341.1 261868419 8537478 complement(1688882..1690942) 1 NC_013416.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 1690942 8537478 D11S_1759 Aggregatibacter actinomycetemcomitans D11S-1 carboxy-terminal protease YP_003256341.1 1688882 R 668336 CDS YP_003256342.1 261868420 8537479 complement(1691016..1691624) 1 NC_013416.1 affects solute and DNA transport through an unknown mechanism; putative solute/DNA competence effector 1691624 8537479 D11S_1760 Aggregatibacter actinomycetemcomitans D11S-1 putative solute/DNA competence effector YP_003256342.1 1691016 R 668336 CDS YP_003256343.1 261868421 8537480 1691842..1693125 1 NC_013416.1 identified by Glimmer3; putative; PqiA family integral membrane protein 1693125 8537480 D11S_1761 Aggregatibacter actinomycetemcomitans D11S-1 PqiA family integral membrane protein YP_003256343.1 1691842 D 668336 CDS YP_003256344.1 261868422 8537481 1693088..1695745 1 NC_013416.1 identified by Glimmer3; putative; mce-like protein 1695745 8537481 D11S_1762 Aggregatibacter actinomycetemcomitans D11S-1 mce-like protein YP_003256344.1 1693088 D 668336 CDS YP_003256345.1 261868423 8537482 complement(1695821..1697065) 1 NC_013416.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 1697065 8537482 D11S_1763 Aggregatibacter actinomycetemcomitans D11S-1 peptidase T YP_003256345.1 1695821 R 668336 CDS YP_003256346.1 261868424 8537483 1697329..1698447 1 NC_013416.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase protein 1698447 potA 8537483 potA Aggregatibacter actinomycetemcomitans D11S-1 putrescine/spermidine ABC transporter ATPase protein YP_003256346.1 1697329 D 668336 CDS YP_003256347.1 261868425 8537484 1698431..1699291 1 NC_013416.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter membrane protein 1699291 potB 8537484 potB Aggregatibacter actinomycetemcomitans D11S-1 spermidine/putrescine ABC transporter membrane protein YP_003256347.1 1698431 D 668336 CDS YP_003256348.1 261868426 8537485 1699291..1700064 1 NC_013416.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter membrane protein 1700064 potC 8537485 potC Aggregatibacter actinomycetemcomitans D11S-1 spermidine/putrescine ABC transporter membrane protein YP_003256348.1 1699291 D 668336 CDS YP_003256349.1 261868427 8537486 1700195..1701292 1 NC_013416.1 identified by Glimmer3; putative; PotD protein 1701292 8537486 D11S_1767 Aggregatibacter actinomycetemcomitans D11S-1 PotD protein YP_003256349.1 1700195 D 668336 CDS YP_003256350.1 261868428 8537487 1701414..1702310 1 NC_013416.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 1702310 8537487 D11S_1768 Aggregatibacter actinomycetemcomitans D11S-1 cytidine deaminase YP_003256350.1 1701414 D 668336 CDS YP_003256351.1 261868429 8537488 complement(1702295..1702408) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1702408 8537488 D11S_1769 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256351.1 1702295 R 668336 CDS YP_003256352.1 261868430 8537489 complement(1702389..1703705) 1 NC_013416.1 identified by Glimmer3; putative; seryl-tRNA synthetase 1703705 8537489 D11S_1770 Aggregatibacter actinomycetemcomitans D11S-1 seryl-tRNA synthetase YP_003256352.1 1702389 R 668336 CDS YP_003256353.1 261868431 8537490 1704013..1705680 1 NC_013416.1 identified by Glimmer3; putative; C4-dicarboxylate membrane transporter 1705680 8537490 D11S_1771 Aggregatibacter actinomycetemcomitans D11S-1 C4-dicarboxylate membrane transporter YP_003256353.1 1704013 D 668336 CDS YP_003256354.1 261868432 8537491 complement(1706177..1707517) 1 NC_013416.1 identified by Glimmer3; putative; recombination factor protein RarA 1707517 8537491 D11S_1772 Aggregatibacter actinomycetemcomitans D11S-1 recombination factor protein RarA YP_003256354.1 1706177 R 668336 CDS YP_003256355.1 261868433 8537492 complement(1707530..1708147) 1 NC_013416.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 1708147 lolA 8537492 lolA Aggregatibacter actinomycetemcomitans D11S-1 outer-membrane lipoprotein carrier protein YP_003256355.1 1707530 R 668336 CDS YP_003256356.1 261868434 8537493 complement(1708240..1710984) 1 NC_013416.1 identified by Glimmer3; putative; outer-membrane lipoprotein carrier protein 1710984 8537493 D11S_1774 Aggregatibacter actinomycetemcomitans D11S-1 outer-membrane lipoprotein carrier protein YP_003256356.1 1708240 R 668336 CDS YP_003256357.1 261868435 8537494 complement(1710988..1711467) 1 NC_013416.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 1711467 8537494 D11S_1775 Aggregatibacter actinomycetemcomitans D11S-1 leucine-responsive transcriptional regulator YP_003256357.1 1710988 R 668336 CDS YP_003256358.1 261868436 8537495 complement(1712006..1713379) 1 NC_013416.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1713379 8537495 D11S_1776 Aggregatibacter actinomycetemcomitans D11S-1 DNA repair protein RadA YP_003256358.1 1712006 R 668336 CDS YP_003256359.1 261868437 8537496 complement(1713382..1714536) 1 NC_013416.1 identified by Glimmer3; putative; adenylate cyclase 1714536 8537496 D11S_1777 Aggregatibacter actinomycetemcomitans D11S-1 adenylate cyclase YP_003256359.1 1713382 R 668336 CDS YP_003256360.1 261868438 8537497 1714701..1715381 1 NC_013416.1 identified by Glimmer3; putative; phosphate transport regulator 1715381 8537497 D11S_1778 Aggregatibacter actinomycetemcomitans D11S-1 phosphate transport regulator YP_003256360.1 1714701 D 668336 CDS YP_003256361.1 261868439 8537498 1715407..1716672 1 NC_013416.1 identified by Glimmer3; putative; phosphate permease 1716672 8537498 D11S_1779 Aggregatibacter actinomycetemcomitans D11S-1 phosphate permease YP_003256361.1 1715407 D 668336 CDS YP_003256362.1 261868440 8537499 1716741..1717352 1 NC_013416.1 identified by Glimmer3; putative; SH3 domain-containing protein 1717352 8537499 D11S_1780 Aggregatibacter actinomycetemcomitans D11S-1 SH3 domain-containing protein YP_003256362.1 1716741 D 668336 CDS YP_003256363.1 261868441 8537500 1717352..1718656 1 NC_013416.1 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 1718656 cca 8537500 cca Aggregatibacter actinomycetemcomitans D11S-1 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_003256363.1 1717352 D 668336 CDS YP_003256364.1 261868442 8537501 1718691..1719314 1 NC_013416.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 1719314 lolB 8537501 lolB Aggregatibacter actinomycetemcomitans D11S-1 outer membrane lipoprotein LolB YP_003256364.1 1718691 D 668336 CDS YP_003256365.1 261868443 8537502 1719314..1720225 1 NC_013416.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1720225 ipk 8537502 ipk Aggregatibacter actinomycetemcomitans D11S-1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_003256365.1 1719314 D 668336 CDS YP_003256366.1 261868444 8537503 1720266..1721216 1 NC_013416.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1721216 8537503 D11S_1784 Aggregatibacter actinomycetemcomitans D11S-1 ribose-phosphate pyrophosphokinase YP_003256366.1 1720266 D 668336 CDS YP_003256367.1 261868445 8537504 1721392..1721538 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1721538 8537504 D11S_1785 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256367.1 1721392 D 668336 CDS YP_003256368.1 261868446 8537505 1721844..1722989 1 NC_013416.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 1722989 lldD 8537505 lldD Aggregatibacter actinomycetemcomitans D11S-1 L-lactate dehydrogenase YP_003256368.1 1721844 D 668336 CDS YP_003256369.1 261868447 8537506 1723232..1724821 1 NC_013416.1 identified by Glimmer3; putative; L-lactate transport 1724821 8537506 D11S_1787 Aggregatibacter actinomycetemcomitans D11S-1 L-lactate transport YP_003256369.1 1723232 D 668336 CDS YP_003256370.1 261868448 8537507 1724868..1725014 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1725014 8537507 D11S_1788 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256370.1 1724868 D 668336 CDS YP_003256371.1 261868449 8537508 complement(1724976..1725308) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1725308 8537508 D11S_1789 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256371.1 1724976 R 668336 CDS YP_003256372.1 261868450 8537509 1725333..1725449 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1725449 8537509 D11S_1790 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256372.1 1725333 D 668336 CDS YP_003256373.1 261868451 8537510 1725508..1726590 1 NC_013416.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 1726590 8537510 D11S_1791 Aggregatibacter actinomycetemcomitans D11S-1 phosphoserine aminotransferase YP_003256373.1 1725508 D 668336 CDS YP_003256374.1 261868452 8537511 1726617..1727762 1 NC_013416.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 1727762 8537511 D11S_1792 Aggregatibacter actinomycetemcomitans D11S-1 histidinol-phosphate aminotransferase YP_003256374.1 1726617 D 668336 CDS YP_003256375.1 261868453 8537512 1727773..1729104 1 NC_013416.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1729104 8537512 D11S_1793 Aggregatibacter actinomycetemcomitans D11S-1 3-phosphoshikimate 1-carboxyvinyltransferase YP_003256375.1 1727773 D 668336 CDS YP_003256376.1 261868454 8537513 complement(1729183..1729650) 1 NC_013416.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 1729650 rnhA 8537513 rnhA Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease H YP_003256376.1 1729183 R 668336 CDS YP_003256377.1 261868455 8537514 1729718..1730479 1 NC_013416.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1730479 8537514 D11S_1795 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit epsilon YP_003256377.1 1729718 D 668336 CDS YP_003256378.1 261868456 8537517 1730927..1731181 1 NC_013416.1 identified by Glimmer3; putative; Stability protein StbD 1731181 8537517 D11S_1798 Aggregatibacter actinomycetemcomitans D11S-1 Stability protein StbD YP_003256378.1 1730927 D 668336 CDS YP_003256379.1 261868457 8537518 1731171..1731461 1 NC_013416.1 identified by Glimmer3; putative; putative relE protein 1731461 8537518 D11S_1799 Aggregatibacter actinomycetemcomitans D11S-1 putative relE protein YP_003256379.1 1731171 D 668336 CDS YP_003256380.1 261868458 8537519 complement(1731519..1731857) 1 NC_013416.1 identified by Glimmer3; putative; cupin 2 1731857 8537519 D11S_1800 Aggregatibacter actinomycetemcomitans D11S-1 cupin 2 YP_003256380.1 1731519 R 668336 CDS YP_003256381.1 261868459 8537520 1732285..1732650 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1732650 8537520 D11S_1801 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256381.1 1732285 D 668336 CDS YP_003256382.1 261868460 8537521 1732821..1734209 1 NC_013416.1 identified by Glimmer3; putative; peptidase U32 1734209 8537521 D11S_1802 Aggregatibacter actinomycetemcomitans D11S-1 peptidase U32 YP_003256382.1 1732821 D 668336 CDS YP_003256383.1 261868461 8537522 1734506..1735597 1 NC_013416.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1735597 queA 8537522 queA Aggregatibacter actinomycetemcomitans D11S-1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003256383.1 1734506 D 668336 CDS YP_003256384.1 261868462 8537523 complement(1735641..1736777) 1 NC_013416.1 identified by Glimmer3; putative; aminotransferase, class I and II 1736777 8537523 D11S_1804 Aggregatibacter actinomycetemcomitans D11S-1 aminotransferase, class I and II YP_003256384.1 1735641 R 668336 CDS YP_003256385.1 261868463 8537524 1737250..1738401 1 NC_013416.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1738401 tgt 8537524 tgt Aggregatibacter actinomycetemcomitans D11S-1 queuine tRNA-ribosyltransferase YP_003256385.1 1737250 D 668336 CDS YP_003256386.1 261868464 8537525 1738693..1738992 1 NC_013416.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1738992 yajC 8537525 yajC Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit YajC YP_003256386.1 1738693 D 668336 CDS YP_003256387.1 261868465 8537526 1739023..1740873 1 NC_013416.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1740873 secD 8537526 secD Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecD YP_003256387.1 1739023 D 668336 CDS YP_003256388.1 261868466 8537527 1740890..1741855 1 NC_013416.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1741855 secF 8537527 secF Aggregatibacter actinomycetemcomitans D11S-1 preprotein translocase subunit SecF YP_003256388.1 1740890 D 668336 CDS YP_003256389.1 261868467 8537528 1742075..1744702 1 NC_013416.1 identified by Glimmer3; putative; heme acquisition system receptor 1744702 8537528 D11S_1809 Aggregatibacter actinomycetemcomitans D11S-1 heme acquisition system receptor YP_003256389.1 1742075 D 668336 CDS YP_003256390.1 261868468 8537529 complement(1744773..1744949) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1744949 8537529 D11S_1810 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256390.1 1744773 R 668336 CDS YP_003256391.1 261868469 8537530 1745052..1747673 1 NC_013416.1 identified by Glimmer3; putative; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 1747673 8537530 D11S_1811 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_003256391.1 1745052 D 668336 CDS YP_003256392.1 261868470 8537531 complement(1747756..1748709) 1 NC_013416.1 identified by Glimmer3; putative; monosaccharide-transporting ATPase 1748709 8537531 D11S_1812 Aggregatibacter actinomycetemcomitans D11S-1 monosaccharide-transporting ATPase YP_003256392.1 1747756 R 668336 CDS YP_003256393.1 261868471 8537532 1748848..1749756 1 NC_013416.1 identified by Glimmer3; putative; inositol 2-dehydrogenase 1749756 8537532 D11S_1813 Aggregatibacter actinomycetemcomitans D11S-1 inositol 2-dehydrogenase YP_003256393.1 1748848 D 668336 CDS YP_003256394.1 261868472 8537533 complement(1749860..1750372) 1 NC_013416.1 Acts as a repressor of the mtlAD operon; mannitol repressor protein 1750372 mtlR 8537533 mtlR Aggregatibacter actinomycetemcomitans D11S-1 mannitol repressor protein YP_003256394.1 1749860 R 668336 CDS YP_003256395.1 261868473 8537534 complement(1750450..1751598) 1 NC_013416.1 identified by Glimmer3; putative; mannitol-1-phosphate 5-dehydrogenase 1751598 8537534 D11S_1815 Aggregatibacter actinomycetemcomitans D11S-1 mannitol-1-phosphate 5-dehydrogenase YP_003256395.1 1750450 R 668336 CDS YP_003256396.1 261868474 8537535 complement(1751676..1753556) 1 NC_013416.1 identified by Glimmer3; putative; PTS system, mannitol-specific IIC subunit 1753556 8537535 D11S_1816 Aggregatibacter actinomycetemcomitans D11S-1 PTS system, mannitol-specific IIC subunit YP_003256396.1 1751676 R 668336 CDS YP_003256397.1 261868475 8537536 complement(1753967..1755400) 1 NC_013416.1 identified by Glimmer3; putative; hemolysin D 1755400 8537536 D11S_1817 Aggregatibacter actinomycetemcomitans D11S-1 hemolysin D YP_003256397.1 1753967 R 668336 CDS YP_003256398.1 261868476 8537537 complement(1755415..1757538) 1 NC_013416.1 identified by Glimmer3; putative; hemolysin secretion protein HlyB 1757538 8537537 D11S_1818 Aggregatibacter actinomycetemcomitans D11S-1 hemolysin secretion protein HlyB YP_003256398.1 1755415 R 668336 CDS YP_003256399.1 261868477 8537538 complement(1757607..1760774) 1 NC_013416.1 identified by Glimmer3; putative; hemolysin A 1760774 8537538 D11S_1819 Aggregatibacter actinomycetemcomitans D11S-1 hemolysin A YP_003256399.1 1757607 R 668336 CDS YP_003256400.1 261868478 8537539 complement(1760787..1761293) 1 NC_013416.1 identified by Glimmer3; putative; hemolysin-activating lysine-acyltransferase HlyC 1761293 8537539 D11S_1820 Aggregatibacter actinomycetemcomitans D11S-1 hemolysin-activating lysine-acyltransferase HlyC YP_003256400.1 1760787 R 668336 CDS YP_003256401.1 261868479 8537540 complement(1762400..1763662) 1 NC_013416.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1763662 glyA 8537540 glyA Aggregatibacter actinomycetemcomitans D11S-1 serine hydroxymethyltransferase YP_003256401.1 1762400 R 668336 CDS YP_003256402.1 261868480 8537541 complement(1763797..1764339) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1764339 8537541 D11S_1822 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256402.1 1763797 R 668336 CDS YP_003256403.1 261868481 8537542 complement(1764577..1764717) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1764717 8537542 D11S_1823 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256403.1 1764577 R 668336 CDS YP_003256404.1 261868482 8537543 complement(1764720..1764869) 1 NC_013416.1 identified by Glimmer3; putative; PTS system sucrose-specific transporter subunit IIBC 1764869 8537543 D11S_1824 Aggregatibacter actinomycetemcomitans D11S-1 PTS system sucrose-specific transporter subunit IIBC YP_003256404.1 1764720 R 668336 CDS YP_003256405.1 261868483 8537544 complement(1764956..1765960) 1 NC_013416.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 1765960 rsmC 8537544 rsmC Aggregatibacter actinomycetemcomitans D11S-1 16S ribosomal RNA m2G1207 methyltransferase YP_003256405.1 1764956 R 668336 CDS YP_003256406.1 261868484 8537545 1766016..1766465 1 NC_013416.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 1766465 8537545 D11S_1826 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit psi YP_003256406.1 1766016 D 668336 CDS YP_003256407.1 261868485 8537546 1766475..1766918 1 NC_013416.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 1766918 rimI 8537546 rimI Aggregatibacter actinomycetemcomitans D11S-1 ribosomal-protein-alanine N-acetyltransferase YP_003256407.1 1766475 D 668336 CDS YP_003256408.1 261868486 8537547 complement(1766920..1770336) 1 NC_013416.1 identified by Glimmer3; putative; exodeoxyribonuclease V subunit gamma 1770336 8537547 D11S_1828 Aggregatibacter actinomycetemcomitans D11S-1 exodeoxyribonuclease V subunit gamma YP_003256408.1 1766920 R 668336 CDS YP_003256409.1 261868487 8537548 complement(1770348..1770650) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1770650 8537548 D11S_1829 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256409.1 1770348 R 668336 CDS YP_003256410.1 261868488 8537549 complement(1770625..1771320) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1771320 8537549 D11S_1830 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256410.1 1770625 R 668336 CDS YP_003256411.1 261868489 8537550 complement(1771349..1771708) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1771708 8537550 D11S_1831 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256411.1 1771349 R 668336 CDS YP_003256412.1 261868490 8537551 complement(1771722..1772339) 1 NC_013416.1 identified by Glimmer3; putative; type II secretory pathway, pseudopilin 1772339 8537551 D11S_1832 Aggregatibacter actinomycetemcomitans D11S-1 type II secretory pathway, pseudopilin YP_003256412.1 1771722 R 668336 CDS YP_003256413.1 261868491 8537555 complement(1772948..1773415) 1 NC_013416.1 identified by Glimmer3; putative; peptidoglycan-associated lipoprotein 1773415 8537555 D11S_1836 Aggregatibacter actinomycetemcomitans D11S-1 peptidoglycan-associated lipoprotein YP_003256413.1 1772948 R 668336 CDS YP_003256414.1 261868492 8537556 complement(1773430..1774710) 1 NC_013416.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1774710 tolB 8537556 tolB Aggregatibacter actinomycetemcomitans D11S-1 translocation protein TolB YP_003256414.1 1773430 R 668336 CDS YP_003256415.1 261868493 8537557 complement(1774745..1775953) 1 NC_013416.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1775953 tolA 8537557 tolA Aggregatibacter actinomycetemcomitans D11S-1 cell envelope integrity inner membrane protein TolA YP_003256415.1 1774745 R 668336 CDS YP_003256416.1 261868494 8537558 complement(1775970..1776392) 1 NC_013416.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1776392 8537558 D11S_1839 Aggregatibacter actinomycetemcomitans D11S-1 colicin uptake protein TolR YP_003256416.1 1775970 R 668336 CDS YP_003256417.1 261868495 8537559 complement(1776478..1777167) 1 NC_013416.1 identified by Glimmer3; putative; protein TolQ 1777167 8537559 D11S_1840 Aggregatibacter actinomycetemcomitans D11S-1 protein TolQ YP_003256417.1 1776478 R 668336 CDS YP_003256418.1 261868496 8537560 complement(1777197..1777601) 1 NC_013416.1 identified by Glimmer3; putative; tol-pal system-associated acyl-CoA thioesterase 1777601 8537560 D11S_1841 Aggregatibacter actinomycetemcomitans D11S-1 tol-pal system-associated acyl-CoA thioesterase YP_003256418.1 1777197 R 668336 CDS YP_003256419.1 261868497 8537561 1777666..1777785 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1777785 8537561 D11S_1842 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256419.1 1777666 D 668336 CDS YP_003256420.1 261868498 8537562 complement(1778110..1779246) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome D ubiquinol oxidase subunit II 1779246 8537562 D11S_1843 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome D ubiquinol oxidase subunit II YP_003256420.1 1778110 R 668336 CDS YP_003256421.1 261868499 8537563 complement(1779261..1780730) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome D ubiquinol oxidase subunit 1 1780730 8537563 D11S_1844 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome D ubiquinol oxidase subunit 1 YP_003256421.1 1779261 R 668336 CDS YP_003256422.1 261868500 8537564 1781278..1781589 1 NC_013416.1 identified by Glimmer3; putative; holliday junction DNA helicase B 1781589 8537564 D11S_1845 Aggregatibacter actinomycetemcomitans D11S-1 holliday junction DNA helicase B YP_003256422.1 1781278 D 668336 CDS YP_003256423.1 261868501 8537565 complement(1781643..1782662) 1 NC_013416.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 1782662 ruvB 8537565 ruvB Aggregatibacter actinomycetemcomitans D11S-1 Holliday junction DNA helicase RuvB YP_003256423.1 1781643 R 668336 CDS YP_003256424.1 261868502 8537566 complement(1782671..1783285) 1 NC_013416.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 1783285 ruvA 8537566 ruvA Aggregatibacter actinomycetemcomitans D11S-1 Holliday junction DNA helicase RuvA YP_003256424.1 1782671 R 668336 CDS YP_003256425.1 261868503 8537567 complement(1783349..1783921) 1 NC_013416.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1783921 ruvC 8537567 ruvC Aggregatibacter actinomycetemcomitans D11S-1 Holliday junction resolvase YP_003256425.1 1783349 R 668336 CDS YP_003256426.1 261868504 8537568 complement(1783977..1784387) 1 NC_013416.1 identified by Glimmer3; putative; excinuclease ABC subunit A 1784387 8537568 D11S_1849 Aggregatibacter actinomycetemcomitans D11S-1 excinuclease ABC subunit A YP_003256426.1 1783977 R 668336 CDS YP_003256427.1 261868505 8537569 complement(1784399..1785139) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1785139 8537569 D11S_1850 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256427.1 1784399 R 668336 CDS YP_003256428.1 261868506 8537570 complement(1785173..1785619) 1 NC_013416.1 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 1785619 ntpA 8537570 ntpA Aggregatibacter actinomycetemcomitans D11S-1 dATP pyrophosphohydrolase YP_003256428.1 1785173 R 668336 CDS YP_003256429.1 261868507 8537571 complement(1785725..1786993) 1 NC_013416.1 identified by Glimmer3; putative; aspartyl-tRNA synthetase 1786993 8537571 D11S_1852 Aggregatibacter actinomycetemcomitans D11S-1 aspartyl-tRNA synthetase YP_003256429.1 1785725 R 668336 CDS YP_003256430.1 261868508 8537572 complement(1787114..1787302) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1787302 8537572 D11S_1853 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256430.1 1787114 R 668336 CDS YP_003256431.1 261868509 8537573 complement(1787385..1789163) 1 NC_013416.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1789163 aspS 8537573 aspS Aggregatibacter actinomycetemcomitans D11S-1 aspartyl-tRNA synthetase YP_003256431.1 1787385 R 668336 CDS YP_003256432.1 261868510 8537574 1789371..1789898 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease T 1789898 8537574 D11S_1855 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease T YP_003256432.1 1789371 D 668336 CDS YP_003256433.1 261868511 8537575 1789970..1790695 1 NC_013416.1 identified by Glimmer3; putative; methyltransferase 1790695 8537575 D11S_1856 Aggregatibacter actinomycetemcomitans D11S-1 methyltransferase YP_003256433.1 1789970 D 668336 CDS YP_003256434.1 261868512 8537576 complement(1790982..1791122) 1 NC_013416.1 identified by Glimmer3; putative; transposase 1791122 8537576 D11S_1857 Aggregatibacter actinomycetemcomitans D11S-1 transposase YP_003256434.1 1790982 R 668336 CDS YP_003256435.1 261868513 8537577 complement(1791391..1793868) 1 NC_013416.1 identified by Glimmer3; putative; putative N-6 DNA methylase 1793868 8537577 D11S_1858 Aggregatibacter actinomycetemcomitans D11S-1 putative N-6 DNA methylase YP_003256435.1 1791391 R 668336 CDS YP_003256436.1 261868514 8537578 complement(1794078..1794410) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1794410 8537578 D11S_1859 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256436.1 1794078 R 668336 CDS YP_003256437.1 261868515 8537579 1794638..1795618 1 NC_013416.1 identified by Glimmer3; putative; putative transposase 1795618 8537579 D11S_1860 Aggregatibacter actinomycetemcomitans D11S-1 putative transposase YP_003256437.1 1794638 D 668336 CDS YP_003256438.1 261868516 8537580 1795618..1795776 1 NC_013416.1 identified by Glimmer3; putative; DNA repair ATPase 1795776 8537580 D11S_1861 Aggregatibacter actinomycetemcomitans D11S-1 DNA repair ATPase YP_003256438.1 1795618 D 668336 CDS YP_003256439.1 261868517 8537581 complement(1796199..1798766) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1798766 8537581 D11S_1862 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256439.1 1796199 R 668336 CDS YP_003256440.1 261868518 8537582 complement(1798909..1800240) 1 NC_013416.1 identified by Glimmer3; putative; glycerol-3-phosphate transporter 1800240 8537582 D11S_1863 Aggregatibacter actinomycetemcomitans D11S-1 glycerol-3-phosphate transporter YP_003256440.1 1798909 R 668336 CDS YP_003256441.1 261868519 8537583 1800641..1802593 1 NC_013416.1 identified by Glimmer3; putative; outer membrane protein 64 1802593 8537583 D11S_1864 Aggregatibacter actinomycetemcomitans D11S-1 outer membrane protein 64 YP_003256441.1 1800641 D 668336 CDS YP_003256442.1 261868520 8537584 1802752..1803159 1 NC_013416.1 identified by Glimmer3; putative; lactoylglutathione lyase 1803159 8537584 D11S_1865 Aggregatibacter actinomycetemcomitans D11S-1 lactoylglutathione lyase YP_003256442.1 1802752 D 668336 CDS YP_003256443.1 261868521 8537585 1803246..1803899 1 NC_013416.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 1803899 8537585 D11S_1866 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease T YP_003256443.1 1803246 D 668336 CDS YP_003256444.1 261868522 8537586 1804251..1805603 1 NC_013416.1 identified by Glimmer3; putative; Na+/H+ antiporter NhaC 1805603 8537586 D11S_1867 Aggregatibacter actinomycetemcomitans D11S-1 Na+/H+ antiporter NhaC YP_003256444.1 1804251 D 668336 CDS YP_003256445.1 261868523 8537587 1805667..1806233 1 NC_013416.1 identified by Glimmer3; putative; primosomal replication protein N 1806233 8537587 D11S_1868 Aggregatibacter actinomycetemcomitans D11S-1 primosomal replication protein N YP_003256445.1 1805667 D 668336 CDS YP_003256446.1 261868524 8537588 complement(1806290..1807714) 1 NC_013416.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1807714 8537588 D11S_1869 Aggregatibacter actinomycetemcomitans D11S-1 (dimethylallyl)adenosine tRNA methylthiotransferase YP_003256446.1 1806290 R 668336 CDS YP_003256447.1 261868525 8537589 1807822..1807950 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1807950 8537589 D11S_1870 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256447.1 1807822 D 668336 CDS YP_003256448.1 261868526 8537590 1808058..1808201 1 NC_013416.1 identified by Glimmer3; putative; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1808201 8537590 D11S_1871 Aggregatibacter actinomycetemcomitans D11S-1 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_003256448.1 1808058 D 668336 CDS YP_003256449.1 261868527 8537591 complement(1808915..1809646) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1809646 8537591 D11S_1872 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256449.1 1808915 R 668336 CDS YP_003256450.1 261868528 8537592 complement(1809648..1810637) 1 NC_013416.1 identified by Glimmer3; putative; octaprenyl-diphosphate synthase 1810637 8537592 D11S_1873 Aggregatibacter actinomycetemcomitans D11S-1 octaprenyl-diphosphate synthase YP_003256450.1 1809648 R 668336 CDS YP_003256451.1 261868529 8537593 1810885..1811196 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L21 1811196 rplU 8537593 rplU Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L21 YP_003256451.1 1810885 D 668336 CDS YP_003256452.1 261868530 8537594 1811217..1811474 1 NC_013416.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 1811474 rpmA 8537594 rpmA Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L27 YP_003256452.1 1811217 D 668336 CDS YP_003256453.1 261868531 8537595 1811546..1812469 1 NC_013416.1 identified by Glimmer3; putative; GTPase ObgE 1812469 8537595 D11S_1876 Aggregatibacter actinomycetemcomitans D11S-1 GTPase ObgE YP_003256453.1 1811546 D 668336 CDS YP_003256454.1 261868532 8537596 1812547..1813464 1 NC_013416.1 identified by Glimmer3; putative; 50S ribosomal protein L27 1813464 8537596 D11S_1877 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L27 YP_003256454.1 1812547 D 668336 CDS YP_003256455.1 261868533 8537597 1813501..1814676 1 NC_013416.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 1814676 obgE 8537597 obgE Aggregatibacter actinomycetemcomitans D11S-1 GTPase ObgE YP_003256455.1 1813501 D 668336 CDS YP_003256456.1 261868534 8537598 complement(1814673..1814792) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1814792 8537598 D11S_1879 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256456.1 1814673 R 668336 CDS YP_003256457.1 261868535 8537599 complement(1814744..1815226) 1 NC_013416.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1815226 smpB 8537599 smpB Aggregatibacter actinomycetemcomitans D11S-1 SsrA-binding protein YP_003256457.1 1814744 R 668336 CDS YP_003256458.1 261868536 8537600 complement(1815434..1815571) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1815571 8537600 D11S_1881 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256458.1 1815434 R 668336 CDS YP_003256459.1 261868537 8537601 1815594..1816442 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide ABC transporter periplasmic oligopeptide-binding protein 1816442 8537601 D11S_1882 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003256459.1 1815594 D 668336 CDS YP_003256460.1 261868538 8537602 1816519..1817217 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide ABC transporter periplasmic oligopeptide-binding protein 1817217 8537602 D11S_1883 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide ABC transporter periplasmic oligopeptide-binding protein YP_003256460.1 1816519 D 668336 CDS YP_003256461.1 261868539 8537603 1817318..1818238 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide transporter permease 1818238 oppB 8537603 oppB Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide transporter permease YP_003256461.1 1817318 D 668336 CDS YP_003256462.1 261868540 8537604 1818248..1819186 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide transport system permease OppC 1819186 8537604 D11S_1885 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide transport system permease OppC YP_003256462.1 1818248 D 668336 CDS YP_003256463.1 261868541 8537605 1819196..1820179 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide transporter ATP-binding protein 1820179 oppD 8537605 oppD Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide transporter ATP-binding protein YP_003256463.1 1819196 D 668336 CDS YP_003256464.1 261868542 8537606 1820176..1821174 1 NC_013416.1 identified by Glimmer3; putative; oligopeptide transport ATP-binding protein OppF 1821174 8537606 D11S_1887 Aggregatibacter actinomycetemcomitans D11S-1 oligopeptide transport ATP-binding protein OppF YP_003256464.1 1820176 D 668336 CDS YP_003256465.1 261868543 8537607 complement(1821281..1821988) 1 NC_013416.1 identified by Glimmer3; putative; two-component response regulator 1821988 8537607 D11S_1888 Aggregatibacter actinomycetemcomitans D11S-1 two-component response regulator YP_003256465.1 1821281 R 668336 CDS YP_003256466.1 261868544 8537608 complement(1822399..1822665) 1 NC_013416.1 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 type B 1822665 rpmE2 8537608 rpmE2 Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L31 type B YP_003256466.1 1822399 R 668336 CDS YP_003256467.1 261868545 8537609 complement(1822877..1823446) 1 NC_013416.1 identified by Glimmer3; putative; decarboxylase family protein Rossmann fold nucleotide-binding protein 1823446 8537609 D11S_1890 Aggregatibacter actinomycetemcomitans D11S-1 decarboxylase family protein Rossmann fold nucleotide-binding protein YP_003256467.1 1822877 R 668336 CDS YP_003256468.1 261868546 8537610 1823589..1825379 1 NC_013416.1 identified by Glimmer3; putative; thiol:disulfide interchange protein DsbD 1825379 8537610 D11S_1891 Aggregatibacter actinomycetemcomitans D11S-1 thiol:disulfide interchange protein DsbD YP_003256468.1 1823589 D 668336 CDS YP_003256469.1 261868547 8537611 complement(1825368..1825481) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1825481 8537611 D11S_1892 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256469.1 1825368 R 668336 CDS YP_003256470.1 261868548 8537612 1825459..1825848 1 NC_013416.1 identified by Glimmer3; putative; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 1825848 8537612 D11S_1893 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003256470.1 1825459 D 668336 CDS YP_003256471.1 261868549 8537614 complement(1826246..1829128) 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease E 1829128 8537614 D11S_1895 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease E YP_003256471.1 1826246 R 668336 CDS YP_003256472.1 261868550 8537615 complement(1829404..1829544) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1829544 8537615 D11S_1896 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256472.1 1829404 R 668336 CDS YP_003256473.1 261868551 8537616 1829603..1830562 1 NC_013416.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C 1830562 8537616 D11S_1897 Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA pseudouridylate synthase C YP_003256473.1 1829603 D 668336 CDS YP_003256474.1 261868552 8537617 complement(1830761..1830976) 1 NC_013416.1 identified by Glimmer3; putative; thioredoxin 1830976 8537617 D11S_1898 Aggregatibacter actinomycetemcomitans D11S-1 thioredoxin YP_003256474.1 1830761 R 668336 CDS YP_003256475.1 261868553 8537618 complement(1831184..1832179) 1 NC_013416.1 identified by Glimmer3; putative; D-lactate dehydrogenase 1832179 8537618 D11S_1899 Aggregatibacter actinomycetemcomitans D11S-1 D-lactate dehydrogenase YP_003256475.1 1831184 R 668336 CDS YP_003256476.1 261868554 8537619 complement(1832203..1833333) 1 NC_013416.1 catalyzes the formation of cysteine from cystathionine; in B. subtilis also has O-acetylhomoserine thiolyase activity; cystathionine gamma-synthase 1833333 8537619 D11S_1900 Aggregatibacter actinomycetemcomitans D11S-1 cystathionine gamma-synthase YP_003256476.1 1832203 R 668336 CDS YP_003256477.1 261868555 8537622 1834313..1835014 1 NC_013416.1 identified by Glimmer3; putative; Lytic transglycosylase catalytic 1835014 8537622 D11S_1903 Aggregatibacter actinomycetemcomitans D11S-1 Lytic transglycosylase catalytic YP_003256477.1 1834313 D 668336 CDS YP_003256478.1 261868556 8537623 1835029..1835331 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1835331 8537623 D11S_1904 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256478.1 1835029 D 668336 CDS YP_003256479.1 261868557 8537624 1835608..1836342 1 NC_013416.1 identified by Glimmer3; putative; type IV secretion system protein VirB4 1836342 8537624 D11S_1905 Aggregatibacter actinomycetemcomitans D11S-1 type IV secretion system protein VirB4 YP_003256479.1 1835608 D 668336 CDS YP_003256480.1 261868558 8537625 1836305..1837294 1 NC_013416.1 identified by Glimmer3; putative; ATPase 1837294 8537625 D11S_1906 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003256480.1 1836305 D 668336 CDS YP_003256481.1 261868559 8537626 1837297..1837494 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1837494 8537626 D11S_1907 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256481.1 1837297 D 668336 CDS YP_003256482.1 261868560 8537627 complement(1837927..1838475) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1838475 8537627 D11S_1908 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256482.1 1837927 R 668336 CDS YP_003256483.1 261868561 8537628 1838462..1838596 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1838596 8537628 D11S_1909 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256483.1 1838462 D 668336 CDS YP_003256484.1 261868562 8537629 1838611..1839375 1 NC_013416.1 identified by Glimmer3; putative; gamma-glutamyl phosphate reductase 1839375 8537629 D11S_1910 Aggregatibacter actinomycetemcomitans D11S-1 gamma-glutamyl phosphate reductase YP_003256484.1 1838611 D 668336 CDS YP_003256485.1 261868563 8537630 complement(1839639..1840646) 1 NC_013416.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1840646 8537630 D11S_1911 Aggregatibacter actinomycetemcomitans D11S-1 fructose-1,6-bisphosphatase YP_003256485.1 1839639 R 668336 CDS YP_003256486.1 261868564 8537631 1840804..1842177 1 NC_013416.1 identified by Glimmer3; putative; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 1842177 8537631 D11S_1912 Aggregatibacter actinomycetemcomitans D11S-1 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_003256486.1 1840804 D 668336 CDS YP_003256487.1 261868565 8537633 1842557..1843675 1 NC_013416.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 1843675 mltA 8537633 mltA Aggregatibacter actinomycetemcomitans D11S-1 murein transglycosylase A YP_003256487.1 1842557 D 668336 CDS YP_003256488.1 261868566 8537634 1843675..1844445 1 NC_013416.1 identified by Glimmer3; putative; ThiF family protein 1844445 8537634 D11S_1915 Aggregatibacter actinomycetemcomitans D11S-1 ThiF family protein YP_003256488.1 1843675 D 668336 CDS YP_003256489.1 261868567 8537635 1844545..1845564 1 NC_013416.1 identified by Glimmer3; putative; high-affinity zinc uptake system protein ZnuA 1845564 8537635 D11S_1916 Aggregatibacter actinomycetemcomitans D11S-1 high-affinity zinc uptake system protein ZnuA YP_003256489.1 1844545 D 668336 CDS YP_003256490.1 261868568 8537636 1845692..1846504 1 NC_013416.1 identified by Glimmer3; putative; 5'-nucleotidase 1846504 8537636 D11S_1917 Aggregatibacter actinomycetemcomitans D11S-1 5'-nucleotidase YP_003256490.1 1845692 D 668336 CDS YP_003256491.1 261868569 8537637 complement(1846584..1847075) 1 NC_013416.1 putative nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; putative nucleotide-binding protein 1847075 8537637 D11S_1918 Aggregatibacter actinomycetemcomitans D11S-1 putative nucleotide-binding protein YP_003256491.1 1846584 R 668336 CDS YP_003256492.1 261868570 8537638 complement(1847086..1848030) 1 NC_013416.1 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 1848030 serB 8537638 serB Aggregatibacter actinomycetemcomitans D11S-1 phosphoserine phosphatase YP_003256492.1 1847086 R 668336 CDS YP_003256493.1 261868571 8537639 1848106..1848783 1 NC_013416.1 identified by Glimmer3; putative; protein AhpA 1848783 8537639 D11S_1920 Aggregatibacter actinomycetemcomitans D11S-1 protein AhpA YP_003256493.1 1848106 D 668336 CDS YP_003256494.1 261868572 8537640 complement(1848740..1848859) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1848859 8537640 D11S_1921 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256494.1 1848740 R 668336 CDS YP_003256495.1 261868573 8537641 complement(1848893..1849156) 1 NC_013416.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1849156 rpsT 8537641 rpsT Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S20 YP_003256495.1 1848893 R 668336 CDS YP_003256496.1 261868574 8537642 1849424..1851001 1 NC_013416.1 identified by Glimmer3; putative; integral membrane protein MviN 1851001 8537642 D11S_1923 Aggregatibacter actinomycetemcomitans D11S-1 integral membrane protein MviN YP_003256496.1 1849424 D 668336 CDS YP_003256497.1 261868575 8537643 1851079..1852005 1 NC_013416.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 1852005 8537643 D11S_1924 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional riboflavin kinase/FMN adenylyltransferase YP_003256497.1 1851079 D 668336 CDS YP_003256498.1 261868576 8537644 1852219..1852383 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1852383 8537644 D11S_1925 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256498.1 1852219 D 668336 CDS YP_003256499.1 261868577 8537645 1852421..1855243 1 NC_013416.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1855243 ileS 8537645 ileS Aggregatibacter actinomycetemcomitans D11S-1 isoleucyl-tRNA synthetase YP_003256499.1 1852421 D 668336 CDS YP_003256500.1 261868578 8537646 1855356..1855817 1 NC_013416.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1855817 lspA 8537646 lspA Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein signal peptidase YP_003256500.1 1855356 D 668336 CDS YP_003256501.1 261868579 8537647 1855817..1856761 1 NC_013416.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1856761 ispH 8537647 ispH Aggregatibacter actinomycetemcomitans D11S-1 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_003256501.1 1855817 D 668336 CDS YP_003256502.1 261868580 8537648 complement(1857226..1858524) 1 NC_013416.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1858524 tig 8537648 tig Aggregatibacter actinomycetemcomitans D11S-1 trigger factor YP_003256502.1 1857226 R 668336 CDS YP_003256503.1 261868581 8537649 complement(1858688..1859581) 1 NC_013416.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 1859581 xerD 8537649 xerD Aggregatibacter actinomycetemcomitans D11S-1 site-specific tyrosine recombinase XerD YP_003256503.1 1858688 R 668336 CDS YP_003256504.1 261868582 8537650 complement(1859584..1860744) 1 NC_013416.1 putative transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; putative 3-phenylpropionic acid transporter 1860744 8537650 D11S_1931 Aggregatibacter actinomycetemcomitans D11S-1 putative 3-phenylpropionic acid transporter YP_003256504.1 1859584 R 668336 CDS YP_003256505.1 261868583 8537651 complement(1860744..1860983) 1 NC_013416.1 identified by Glimmer3; putative; pyrroline-5-carboxylate reductase 1860983 8537651 D11S_1932 Aggregatibacter actinomycetemcomitans D11S-1 pyrroline-5-carboxylate reductase YP_003256505.1 1860744 R 668336 CDS YP_003256506.1 261868584 8537652 complement(1860989..1861447) 1 NC_013416.1 identified by Glimmer3; putative; pyrroline-5-carboxylate reductase 1861447 8537652 D11S_1933 Aggregatibacter actinomycetemcomitans D11S-1 pyrroline-5-carboxylate reductase YP_003256506.1 1860989 R 668336 CDS YP_003256507.1 261868585 8537653 1861510..1862415 1 NC_013416.1 Required for efficient pilin antigenic variation; recombination associated protein 1862415 rdgC 8537653 rdgC Aggregatibacter actinomycetemcomitans D11S-1 recombination associated protein YP_003256507.1 1861510 D 668336 CDS YP_003256508.1 261868586 8537654 complement(1862506..1862880) 1 NC_013416.1 identified by Glimmer3; putative; opacity-associated protein OapB 1862880 8537654 D11S_1935 Aggregatibacter actinomycetemcomitans D11S-1 opacity-associated protein OapB YP_003256508.1 1862506 R 668336 CDS YP_003256509.1 261868587 8537655 complement(1862942..1864255) 1 NC_013416.1 identified by Glimmer3; putative; opacity-associated protein OapA 1864255 8537655 D11S_1936 Aggregatibacter actinomycetemcomitans D11S-1 opacity-associated protein OapA YP_003256509.1 1862942 R 668336 CDS YP_003256510.1 261868588 8537656 complement(1864426..1865457) 1 NC_013416.1 identified by Glimmer3; putative; DNA repair protein RecO 1865457 8537656 D11S_1937 Aggregatibacter actinomycetemcomitans D11S-1 DNA repair protein RecO YP_003256510.1 1864426 R 668336 CDS YP_003256511.1 261868589 8537657 1865522..1866043 1 NC_013416.1 identified by Glimmer3; putative; elongation factor P 1866043 8537657 D11S_1938 Aggregatibacter actinomycetemcomitans D11S-1 elongation factor P YP_003256511.1 1865522 D 668336 CDS YP_003256512.1 261868590 8537658 1866123..1866290 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1866290 8537658 D11S_1939 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256512.1 1866123 D 668336 CDS YP_003256513.1 261868591 8537659 1866373..1867749 1 NC_013416.1 catalyzes the formation of phenol and pyruvate from tyrosine; tyrosine phenol-lyase 1867749 8537659 D11S_1940 Aggregatibacter actinomycetemcomitans D11S-1 tyrosine phenol-lyase YP_003256513.1 1866373 D 668336 CDS YP_003256514.1 261868592 8537660 1867911..1869125 1 NC_013416.1 identified by Glimmer3; putative; TyrP 1869125 8537660 D11S_1941 Aggregatibacter actinomycetemcomitans D11S-1 TyrP YP_003256514.1 1867911 D 668336 CDS YP_003256515.1 261868593 8537661 complement(1869191..1869868) 1 NC_013416.1 identified by Glimmer3; putative; helix-turn-helix containing protein 1869868 8537661 D11S_1942 Aggregatibacter actinomycetemcomitans D11S-1 helix-turn-helix containing protein YP_003256515.1 1869191 R 668336 CDS YP_003256516.1 261868594 8537662 complement(1869931..1870437) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1870437 8537662 D11S_1943 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256516.1 1869931 R 668336 CDS YP_003256517.1 261868595 8537663 complement(1870430..1871161) 1 NC_013416.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 1871161 8537663 D11S_1944 Aggregatibacter actinomycetemcomitans D11S-1 UDP-2,3-diacylglucosamine hydrolase YP_003256517.1 1870430 R 668336 CDS YP_003256518.1 261868596 8537664 1871272..1872015 1 NC_013416.1 identified by Glimmer3; putative; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1872015 8537664 D11S_1945 Aggregatibacter actinomycetemcomitans D11S-1 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003256518.1 1871272 D 668336 CDS YP_003256519.1 261868597 8537665 1872023..1873435 1 NC_013416.1 identified by Glimmer3; putative; protein SufI 1873435 8537665 D11S_1946 Aggregatibacter actinomycetemcomitans D11S-1 protein SufI YP_003256519.1 1872023 D 668336 CDS YP_003256520.1 261868598 8537666 complement(1873506..1874369) 1 NC_013416.1 identified by Glimmer3; putative; ribosomal protein L11 methyltransferase 1874369 8537666 D11S_1947 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein L11 methyltransferase YP_003256520.1 1873506 R 668336 CDS YP_003256521.1 261868599 8537667 complement(1874511..1875251) 1 NC_013416.1 identified by Glimmer3; putative; pyruvate formate-lyase 1-activating enzyme 1875251 8537667 D11S_1948 Aggregatibacter actinomycetemcomitans D11S-1 pyruvate formate-lyase 1-activating enzyme YP_003256521.1 1874511 R 668336 CDS YP_003256522.1 261868600 8537668 complement(1875396..1877708) 1 NC_013416.1 identified by Glimmer3; putative; formate acetyltransferase 1877708 8537668 D11S_1949 Aggregatibacter actinomycetemcomitans D11S-1 formate acetyltransferase YP_003256522.1 1875396 R 668336 CDS YP_003256523.1 261868601 8537669 complement(1877807..1878658) 1 NC_013416.1 identified by Glimmer3; putative; putative formate transporter 1 1878658 8537669 D11S_1950 Aggregatibacter actinomycetemcomitans D11S-1 putative formate transporter 1 YP_003256523.1 1877807 R 668336 CDS YP_003256524.1 261868602 8537670 1878971..1879321 1 NC_013416.1 identified by Glimmer3; putative; histidine triad nucleotide-binding protein 2 1879321 8537670 D11S_1951 Aggregatibacter actinomycetemcomitans D11S-1 histidine triad nucleotide-binding protein 2 YP_003256524.1 1878971 D 668336 CDS YP_003256525.1 261868603 8537671 1879322..1879675 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1879675 8537671 D11S_1952 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256525.1 1879322 D 668336 CDS YP_003256526.1 261868604 8537672 1879677..1880723 1 NC_013416.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1880723 8537672 D11S_1953 Aggregatibacter actinomycetemcomitans D11S-1 beta-hexosaminidase YP_003256526.1 1879677 D 668336 CDS YP_003256527.1 261868605 8537673 1880725..1881285 1 NC_013416.1 identified by Glimmer3; putative; 23S rRNA (uracil-5-)-methyltransferase RumB 1881285 8537673 D11S_1954 Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA (uracil-5-)-methyltransferase RumB YP_003256527.1 1880725 D 668336 CDS YP_003256528.1 261868606 8537674 1881405..1881902 1 NC_013416.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 1881902 rumB 8537674 rumB Aggregatibacter actinomycetemcomitans D11S-1 23S rRNA methyluridine methyltransferase YP_003256528.1 1881405 D 668336 CDS YP_003256529.1 261868607 8537675 complement(1882002..1882967) 1 NC_013416.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 1882967 8537675 D11S_1956 Aggregatibacter actinomycetemcomitans D11S-1 6-phosphofructokinase YP_003256529.1 1882002 R 668336 CDS YP_003256530.1 261868608 8537676 complement(1883029..1883949) 1 NC_013416.1 identified by Glimmer3; putative; ferrous-iron efflux pump FieF 1883949 8537676 D11S_1957 Aggregatibacter actinomycetemcomitans D11S-1 ferrous-iron efflux pump FieF YP_003256530.1 1883029 R 668336 CDS YP_003256531.1 261868609 8537677 complement(1883949..1884515) 1 NC_013416.1 identified by Glimmer3; putative; 6-phosphofructokinase 1884515 8537677 D11S_1958 Aggregatibacter actinomycetemcomitans D11S-1 6-phosphofructokinase YP_003256531.1 1883949 R 668336 CDS YP_003256532.1 261868610 8537678 complement(1884517..1885296) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1885296 8537678 D11S_1959 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256532.1 1884517 R 668336 CDS YP_003256533.1 261868611 8537679 complement(1885318..1885986) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1885986 8537679 D11S_1960 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256533.1 1885318 R 668336 CDS YP_003256534.1 261868612 8537680 1886272..1886655 1 NC_013416.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 1886655 8537680 D11S_1961 Aggregatibacter actinomycetemcomitans D11S-1 autonomous glycyl radical cofactor GrcA YP_003256534.1 1886272 D 668336 CDS YP_003256535.1 261868613 8537681 1886819..1888615 1 NC_013416.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1888615 8537681 D11S_1962 Aggregatibacter actinomycetemcomitans D11S-1 GTP-binding protein LepA YP_003256535.1 1886819 D 668336 CDS YP_003256536.1 261868614 8537682 1888626..1889648 1 NC_013416.1 identified by Glimmer3; putative; signal peptidase I 1889648 8537682 D11S_1963 Aggregatibacter actinomycetemcomitans D11S-1 signal peptidase I YP_003256536.1 1888626 D 668336 CDS YP_003256537.1 261868615 8537683 1889655..1890335 1 NC_013416.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1890335 rnc 8537683 rnc Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease III YP_003256537.1 1889655 D 668336 CDS YP_003256538.1 261868616 8537684 1890332..1891240 1 NC_013416.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1891240 era 8537684 era Aggregatibacter actinomycetemcomitans D11S-1 GTP-binding protein Era YP_003256538.1 1890332 D 668336 CDS YP_003256539.1 261868617 8537685 complement(1891344..1892699) 1 NC_013416.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1892699 trmE 8537685 trmE Aggregatibacter actinomycetemcomitans D11S-1 tRNA modification GTPase TrmE YP_003256539.1 1891344 R 668336 CDS YP_003256540.1 261868618 8537686 complement(1892827..1894458) 1 NC_013416.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 1894458 8537686 D11S_1967 Aggregatibacter actinomycetemcomitans D11S-1 putative inner membrane protein translocase component YidC YP_003256540.1 1892827 R 668336 CDS YP_003256541.1 261868619 8537687 complement(1894458..1894721) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1894721 8537687 D11S_1968 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256541.1 1894458 R 668336 CDS YP_003256542.1 261868620 8537688 complement(1894676..1895011) 1 NC_013416.1 identified by Glimmer3; putative; ribonuclease P protein component 1895011 8537688 D11S_1969 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease P protein component YP_003256542.1 1894676 R 668336 CDS YP_003256543.1 261868621 8537689 complement(1895057..1895191) 1 NC_013416.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 1895191 rpmH 8537689 rpmH Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L34 YP_003256543.1 1895057 R 668336 CDS YP_003256544.1 261868622 8537690 complement(1895386..1895523) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1895523 8537690 D11S_1971 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256544.1 1895386 R 668336 CDS YP_003256545.1 261868623 8537691 1895609..1896970 1 NC_013416.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1896970 dnaA 8537691 dnaA Aggregatibacter actinomycetemcomitans D11S-1 chromosomal replication initiation protein YP_003256545.1 1895609 D 668336 CDS YP_003256546.1 261868624 8537692 1896978..1898081 1 NC_013416.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1898081 8537692 D11S_1973 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit beta YP_003256546.1 1896978 D 668336 CDS YP_003256547.1 261868625 8537693 1898085..1899161 1 NC_013416.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 1899161 recF 8537693 recF Aggregatibacter actinomycetemcomitans D11S-1 recombination protein F YP_003256547.1 1898085 D 668336 CDS YP_003256548.1 261868626 8537694 complement(1899208..1899963) 1 NC_013416.1 identified by Glimmer3; putative; methyltransferase domain-containing protein 1899963 8537694 D11S_1975 Aggregatibacter actinomycetemcomitans D11S-1 methyltransferase domain-containing protein YP_003256548.1 1899208 R 668336 CDS YP_003256549.1 261868627 8537695 1900151..1900726 1 NC_013416.1 identified by Glimmer3; putative; copper/zinc superoxide dismutase 1900726 8537695 D11S_1976 Aggregatibacter actinomycetemcomitans D11S-1 copper/zinc superoxide dismutase YP_003256549.1 1900151 D 668336 CDS YP_003256550.1 261868628 8537696 1900993..1901166 1 NC_013416.1 identified by Glimmer3; putative; ISPsy8, transposase OrfA 1901166 8537696 D11S_1977 Aggregatibacter actinomycetemcomitans D11S-1 ISPsy8, transposase OrfA YP_003256550.1 1900993 D 668336 CDS YP_003256551.1 261868629 8537697 1901553..1901960 1 NC_013416.1 identified by Glimmer3; putative; integrase catalytic subunit 1901960 8537697 D11S_1978 Aggregatibacter actinomycetemcomitans D11S-1 integrase catalytic subunit YP_003256551.1 1901553 D 668336 CDS YP_003256552.1 261868630 8537698 complement(1902157..1902420) 1 NC_013416.1 identified by Glimmer3; putative; helix-turn-helix domain-containing protein 1902420 8537698 D11S_1979 Aggregatibacter actinomycetemcomitans D11S-1 helix-turn-helix domain-containing protein YP_003256552.1 1902157 R 668336 CDS YP_003256553.1 261868631 8537699 1902571..1904208 1 NC_013416.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 1904208 8537699 D11S_1980 Aggregatibacter actinomycetemcomitans D11S-1 malate dehydrogenase YP_003256553.1 1902571 D 668336 CDS YP_003256554.1 261868632 8537700 complement(1904428..1905627) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1905627 8537700 D11S_1981 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256554.1 1904428 R 668336 CDS YP_003256555.1 261868633 8537701 complement(1905624..1906673) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome C-type biogenesis protein 1906673 8537701 D11S_1982 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome C-type biogenesis protein YP_003256555.1 1905624 R 668336 CDS YP_003256556.1 261868634 8537702 complement(1906670..1907200) 1 NC_013416.1 identified by Glimmer3; putative; thiol-disulfide interchange protein 1907200 8537702 D11S_1983 Aggregatibacter actinomycetemcomitans D11S-1 thiol-disulfide interchange protein YP_003256556.1 1906670 R 668336 CDS YP_003256557.1 261868635 8537703 complement(1907193..1909103) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type biogenesis protein CcmF 1909103 8537703 D11S_1984 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type biogenesis protein CcmF YP_003256557.1 1907193 R 668336 CDS YP_003256558.1 261868636 8537704 1909125..1909493 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1909493 8537704 D11S_1985 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256558.1 1909125 D 668336 CDS YP_003256559.1 261868637 8537705 complement(1909690..1910655) 1 NC_013416.1 identified by Glimmer3; putative; NrfD protein 1910655 8537705 D11S_1986 Aggregatibacter actinomycetemcomitans D11S-1 NrfD protein YP_003256559.1 1909690 R 668336 CDS YP_003256560.1 261868638 8537706 complement(1910652..1911329) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c nitrite reductase, Fe-S protein 1911329 8537706 D11S_1987 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c nitrite reductase, Fe-S protein YP_003256560.1 1910652 R 668336 CDS YP_003256561.1 261868639 8537707 complement(1911326..1911991) 1 NC_013416.1 part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; cytochrome c nitrite reductase pentaheme subunit 1911991 8537707 D11S_1988 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c nitrite reductase pentaheme subunit YP_003256561.1 1911326 R 668336 CDS YP_003256562.1 261868640 8537708 complement(1912065..1913588) 1 NC_013416.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 1913588 nrfA 8537708 nrfA Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c552 YP_003256562.1 1912065 R 668336 CDS YP_003256563.1 261868641 8537709 complement(1914165..1914455) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1914455 8537709 D11S_1990 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256563.1 1914165 R 668336 CDS YP_003256564.1 261868642 8537710 complement(1914473..1915096) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1915096 8537710 D11S_1991 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256564.1 1914473 R 668336 CDS YP_003256565.1 261868643 8537711 complement(1915231..1916154) 1 NC_013416.1 identified by Glimmer3; putative; TPR-repeat-containing protein 1916154 8537711 D11S_1992 Aggregatibacter actinomycetemcomitans D11S-1 TPR-repeat-containing protein YP_003256565.1 1915231 R 668336 CDS YP_003256566.1 261868644 8537712 complement(1916154..1916606) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type biogenesis protein CcmH 1916606 8537712 D11S_1993 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type biogenesis protein CcmH YP_003256566.1 1916154 R 668336 CDS YP_003256567.1 261868645 8537713 complement(1916705..1917250) 1 NC_013416.1 identified by Glimmer3; putative; thiol-disulfide interchange protein 1917250 8537713 D11S_1994 Aggregatibacter actinomycetemcomitans D11S-1 thiol-disulfide interchange protein YP_003256567.1 1916705 R 668336 CDS YP_003256568.1 261868646 8537714 complement(1917279..1919237) 1 NC_013416.1 identified by Glimmer3; putative; cytochrome c-type biogenesis protein CcmF 1919237 8537714 D11S_1995 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type biogenesis protein CcmF YP_003256568.1 1917279 R 668336 CDS YP_003256569.1 261868647 8537715 complement(1919237..1919755) 1 NC_013416.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1919755 8537715 D11S_1996 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c-type biogenesis protein CcmE YP_003256569.1 1919237 R 668336 CDS YP_003256570.1 261868648 8537716 complement(1919752..1919958) 1 NC_013416.1 identified by Glimmer3; putative; Heme exporter protein CcmD 1919958 8537716 D11S_1997 Aggregatibacter actinomycetemcomitans D11S-1 Heme exporter protein CcmD YP_003256570.1 1919752 R 668336 CDS YP_003256571.1 261868649 8537717 complement(1919976..1920713) 1 NC_013416.1 identified by Glimmer3; putative; CcmC 1920713 8537717 D11S_1998 Aggregatibacter actinomycetemcomitans D11S-1 CcmC YP_003256571.1 1919976 R 668336 CDS YP_003256572.1 261868650 8537718 complement(1920724..1921389) 1 NC_013416.1 identified by Glimmer3; putative; heme exporter protein CcmB 1921389 8537718 D11S_1999 Aggregatibacter actinomycetemcomitans D11S-1 heme exporter protein CcmB YP_003256572.1 1920724 R 668336 CDS YP_003256573.1 261868651 8537719 complement(1921394..1922029) 1 NC_013416.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 1922029 8537719 D11S_2000 Aggregatibacter actinomycetemcomitans D11S-1 cytochrome c biogenesis protein CcmA YP_003256573.1 1921394 R 668336 CDS YP_003256574.1 261868652 8537720 complement(1922201..1922986) 1 NC_013416.1 identified by Glimmer3; putative; bicyclomycin resistance protein 1922986 8537720 D11S_2001 Aggregatibacter actinomycetemcomitans D11S-1 bicyclomycin resistance protein YP_003256574.1 1922201 R 668336 CDS YP_003256575.1 261868653 8537721 complement(1922983..1923393) 1 NC_013416.1 identified by Glimmer3; putative; bicyclomycin resistance protein 1923393 8537721 D11S_2002 Aggregatibacter actinomycetemcomitans D11S-1 bicyclomycin resistance protein YP_003256575.1 1922983 R 668336 CDS YP_003256576.1 261868654 8537722 complement(1923398..1924099) 1 NC_013416.1 identified by Glimmer3; putative; ribosomal small subunit pseudouridine synthase A 1924099 8537722 D11S_2003 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal small subunit pseudouridine synthase A YP_003256576.1 1923398 R 668336 CDS YP_003256577.1 261868655 8537723 1924141..1924323 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1924323 8537723 D11S_2004 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256577.1 1924141 D 668336 CDS YP_003256578.1 261868656 8537724 1924316..1926580 1 NC_013416.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1926580 8537724 D11S_2005 Aggregatibacter actinomycetemcomitans D11S-1 malic enzyme YP_003256578.1 1924316 D 668336 CDS YP_003256579.1 261868657 8537725 1926725..1927369 1 NC_013416.1 identified by Glimmer3; putative; superoxide dismutase 1927369 8537725 D11S_2006 Aggregatibacter actinomycetemcomitans D11S-1 superoxide dismutase YP_003256579.1 1926725 D 668336 CDS YP_003256580.1 261868658 8537726 1927780..1928571 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 1928571 8537726 D11S_2007 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256580.1 1927780 D 668336 CDS YP_003256581.1 261868659 8537727 complement(1928773..1929600) 1 NC_013416.1 identified by Glimmer3; putative; zinc protease 1929600 8537727 D11S_2008 Aggregatibacter actinomycetemcomitans D11S-1 zinc protease YP_003256581.1 1928773 R 668336 CDS YP_003256582.1 261868660 8537728 1929740..1930183 1 NC_013416.1 identified by Glimmer3; putative; LysM domain/BON superfamily protein 1930183 8537728 D11S_2009 Aggregatibacter actinomycetemcomitans D11S-1 LysM domain/BON superfamily protein YP_003256582.1 1929740 D 668336 CDS YP_003256583.1 261868661 8537729 complement(1930273..1930869) 1 NC_013416.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 1930869 8537729 D11S_2010 Aggregatibacter actinomycetemcomitans D11S-1 putative glycerol-3-phosphate acyltransferase PlsY YP_003256583.1 1930273 R 668336 CDS YP_003256584.1 261868662 8537730 1930966..1931319 1 NC_013416.1 identified by Glimmer3; putative; dihydroneopterin aldolase 1931319 8537730 D11S_2011 Aggregatibacter actinomycetemcomitans D11S-1 dihydroneopterin aldolase YP_003256584.1 1930966 D 668336 CDS YP_003256585.1 261868663 8537731 1931340..1932770 1 NC_013416.1 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; putative transglycosylase 1932770 8537731 D11S_2012 Aggregatibacter actinomycetemcomitans D11S-1 putative transglycosylase YP_003256585.1 1931340 D 668336 CDS YP_003256586.1 261868664 8537732 1932781..1932927 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1932927 8537732 D11S_2013 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256586.1 1932781 D 668336 CDS YP_003256587.1 261868665 8537733 complement(1932970..1933509) 1 NC_013416.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1933509 8537733 D11S_2014 Aggregatibacter actinomycetemcomitans D11S-1 disulfide bond formation protein B YP_003256587.1 1932970 R 668336 CDS YP_003256588.1 261868666 8537734 complement(1933533..1935077) 1 NC_013416.1 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 1935077 nhaB 8537734 nhaB Aggregatibacter actinomycetemcomitans D11S-1 sodium/proton antiporter YP_003256588.1 1933533 R 668336 CDS YP_003256589.1 261868667 8537735 1935272..1936003 1 NC_013416.1 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 1936003 8537735 D11S_2016 Aggregatibacter actinomycetemcomitans D11S-1 fatty acid metabolism regulator YP_003256589.1 1935272 D 668336 CDS YP_003256590.1 261868668 8537736 complement(1936124..1937338) 1 NC_013416.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 1937338 8537736 D11S_2017 Aggregatibacter actinomycetemcomitans D11S-1 aminotransferase AlaT YP_003256590.1 1936124 R 668336 CDS YP_003256591.1 261868669 8537737 1937455..1938759 1 NC_013416.1 identified by Glimmer3; putative; menaquinone-specific isochorismate synthase 1938759 8537737 D11S_2018 Aggregatibacter actinomycetemcomitans D11S-1 menaquinone-specific isochorismate synthase YP_003256591.1 1937455 D 668336 CDS YP_003256592.1 261868670 8537738 1938750..1940456 1 NC_013416.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1940456 8537738 D11S_2019 Aggregatibacter actinomycetemcomitans D11S-1 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_003256592.1 1938750 D 668336 CDS YP_003256593.1 261868671 8537739 1940509..1941258 1 NC_013416.1 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase YfbB 1941258 8537739 D11S_2020 Aggregatibacter actinomycetemcomitans D11S-1 acyl-CoA thioester hydrolase YfbB YP_003256593.1 1940509 D 668336 CDS YP_003256594.1 261868672 8537740 1941354..1941623 1 NC_013416.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 1941623 rpsO 8537740 rpsO Aggregatibacter actinomycetemcomitans D11S-1 30S ribosomal protein S15 YP_003256594.1 1941354 D 668336 CDS YP_003256595.1 261868673 8537741 1941831..1942985 1 NC_013416.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1942985 8537741 D11S_2022 Aggregatibacter actinomycetemcomitans D11S-1 S-adenosylmethionine synthetase YP_003256595.1 1941831 D 668336 CDS YP_003256596.1 261868674 8537742 1943013..1943555 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1943555 8537742 D11S_2023 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256596.1 1943013 D 668336 CDS YP_003256597.1 261868675 8537743 1943712..1944953 1 NC_013416.1 identified by Glimmer3; putative; serine transporter 1944953 8537743 D11S_2024 Aggregatibacter actinomycetemcomitans D11S-1 serine transporter YP_003256597.1 1943712 D 668336 CDS YP_003256598.1 261868676 8537744 1945046..1946410 1 NC_013416.1 identified by Glimmer3; putative; L-serine ammonia-lyase 1946410 8537744 D11S_2025 Aggregatibacter actinomycetemcomitans D11S-1 L-serine ammonia-lyase YP_003256598.1 1945046 D 668336 CDS YP_003256599.1 261868677 8537745 complement(1946591..1947640) 1 NC_013416.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; L-asparaginase II 1947640 ansB 8537745 ansB Aggregatibacter actinomycetemcomitans D11S-1 L-asparaginase II YP_003256599.1 1946591 R 668336 CDS YP_003256600.1 261868678 8537746 1947935..1949074 1 NC_013416.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1949074 8537746 D11S_2027 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal RNA large subunit methyltransferase N YP_003256600.1 1947935 D 668336 CDS YP_003256601.1 261868679 8537747 1949096..1949647 1 NC_013416.1 identified by Glimmer3; putative; type IV pilus biogenesis/stability protein PilW 1949647 8537747 D11S_2028 Aggregatibacter actinomycetemcomitans D11S-1 type IV pilus biogenesis/stability protein PilW YP_003256601.1 1949096 D 668336 CDS YP_003256602.1 261868680 8537748 1949791..1950846 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1950846 8537748 D11S_2029 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256602.1 1949791 D 668336 CDS YP_003256603.1 261868681 8537749 1950858..1951961 1 NC_013416.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1951961 ispG 8537749 ispG Aggregatibacter actinomycetemcomitans D11S-1 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_003256603.1 1950858 D 668336 CDS YP_003256604.1 261868682 8537750 1951983..1953260 1 NC_013416.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1953260 hisS 8537750 hisS Aggregatibacter actinomycetemcomitans D11S-1 histidyl-tRNA synthetase YP_003256604.1 1951983 D 668336 CDS YP_003256605.1 261868683 8537751 1953271..1953885 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1953885 8537751 D11S_2032 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256605.1 1953271 D 668336 CDS YP_003256606.1 261868684 8537752 1953938..1954390 1 NC_013416.1 identified by Glimmer3; putative; isoprenylcysteine carboxyl methyltransferase 1954390 8537752 D11S_2033 Aggregatibacter actinomycetemcomitans D11S-1 isoprenylcysteine carboxyl methyltransferase YP_003256606.1 1953938 D 668336 CDS YP_003256607.1 261868685 8537753 complement(1954396..1955100) 1 NC_013416.1 identified by Glimmer3; putative; DnaA regulatory inactivator Hda 1955100 8537753 D11S_2034 Aggregatibacter actinomycetemcomitans D11S-1 DnaA regulatory inactivator Hda YP_003256607.1 1954396 R 668336 CDS YP_003256608.1 261868686 8537754 1955086..1955223 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1955223 8537754 D11S_2035 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256608.1 1955086 D 668336 CDS YP_003256609.1 261868687 8537755 complement(1955220..1956473) 1 NC_013416.1 identified by Glimmer3; putative; uracil permease 1956473 8537755 D11S_2036 Aggregatibacter actinomycetemcomitans D11S-1 uracil permease YP_003256609.1 1955220 R 668336 CDS YP_003256610.1 261868688 8537756 complement(1956597..1957223) 1 NC_013416.1 identified by Glimmer3; putative; uracil phosphoribosyltransferase 1957223 8537756 D11S_2037 Aggregatibacter actinomycetemcomitans D11S-1 uracil phosphoribosyltransferase YP_003256610.1 1956597 R 668336 CDS YP_003256611.1 261868689 8537757 complement(1957358..1959205) 1 NC_013416.1 identified by Glimmer3; putative; peptidyl-prolyl cis-trans isomerase D 1959205 8537757 D11S_2038 Aggregatibacter actinomycetemcomitans D11S-1 peptidyl-prolyl cis-trans isomerase D YP_003256611.1 1957358 R 668336 CDS YP_003256612.1 261868690 8537758 complement(1959338..1961611) 1 NC_013416.1 Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; bifunctional glutamate--cysteine ligase/glutathione synthetase 1961611 8537758 D11S_2039 Aggregatibacter actinomycetemcomitans D11S-1 bifunctional glutamate--cysteine ligase/glutathione synthetase YP_003256612.1 1959338 R 668336 CDS YP_003256613.1 261868691 8537759 complement(1961608..1961739) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1961739 8537759 D11S_2040 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256613.1 1961608 R 668336 CDS YP_003256614.1 261868692 8537760 1961843..1963444 1 NC_013416.1 identified by Glimmer3; putative; Dca 1963444 8537760 D11S_2041 Aggregatibacter actinomycetemcomitans D11S-1 Dca YP_003256614.1 1961843 D 668336 CDS YP_003256615.1 261868693 8537761 1963701..1964267 1 NC_013416.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1964267 clpP 8537761 clpP Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent Clp protease proteolytic subunit YP_003256615.1 1963701 D 668336 CDS YP_003256616.1 261868694 8537762 1964277..1965518 1 NC_013416.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1965518 clpX 8537762 clpX Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent protease ATP-binding subunit ClpX YP_003256616.1 1964277 D 668336 CDS YP_003256617.1 261868695 8537763 complement(1965581..1965904) 1 NC_013416.1 identified by Glimmer3; putative; putative DNA-binding protein 1965904 8537763 D11S_2044 Aggregatibacter actinomycetemcomitans D11S-1 putative DNA-binding protein YP_003256617.1 1965581 R 668336 CDS YP_003256618.1 261868696 8537764 complement(1965897..1966061) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1966061 8537764 D11S_2045 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256618.1 1965897 R 668336 CDS YP_003256619.1 261868697 8537765 complement(1966364..1967209) 1 NC_013416.1 identified by Glimmer3; putative; membrane protein YoaT 1967209 8537765 D11S_2046 Aggregatibacter actinomycetemcomitans D11S-1 membrane protein YoaT YP_003256619.1 1966364 R 668336 CDS YP_003256620.1 261868698 8537766 complement(1967282..1969441) 1 NC_013416.1 identified by Glimmer3; putative; copper-translocating P-type ATPase 1969441 8537766 D11S_2047 Aggregatibacter actinomycetemcomitans D11S-1 copper-translocating P-type ATPase YP_003256620.1 1967282 R 668336 CDS YP_003256621.1 261868699 8537767 complement(1969528..1969740) 1 NC_013416.1 identified by Glimmer3; putative; heavy metal-binding protein 1969740 8537767 D11S_2048 Aggregatibacter actinomycetemcomitans D11S-1 heavy metal-binding protein YP_003256621.1 1969528 R 668336 CDS YP_003256622.1 261868700 8537768 1969835..1970221 1 NC_013416.1 identified by Glimmer3; putative; transcriptional regulator MerR family protein 1970221 8537768 D11S_2049 Aggregatibacter actinomycetemcomitans D11S-1 transcriptional regulator MerR family protein YP_003256622.1 1969835 D 668336 CDS YP_003256623.1 261868701 8537769 1970492..1971574 1 NC_013416.1 identified by Glimmer3; putative; type I modification enzyme 1971574 8537769 D11S_2050 Aggregatibacter actinomycetemcomitans D11S-1 type I modification enzyme YP_003256623.1 1970492 D 668336 CDS YP_003256624.1 261868702 8537770 1971588..1971809 1 NC_013416.1 identified by Glimmer3; putative; type I restriction enzyme 1971809 8537770 D11S_2051 Aggregatibacter actinomycetemcomitans D11S-1 type I restriction enzyme YP_003256624.1 1971588 D 668336 CDS YP_003256625.1 261868703 8537771 complement(1972137..1972973) 1 NC_013416.1 identified by Glimmer3; putative; protein YaeB 1972973 8537771 D11S_2052 Aggregatibacter actinomycetemcomitans D11S-1 protein YaeB YP_003256625.1 1972137 R 668336 CDS YP_003256626.1 261868704 8537772 1973101..1974006 1 NC_013416.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 1974006 8537772 D11S_2053 Aggregatibacter actinomycetemcomitans D11S-1 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003256626.1 1973101 D 668336 CDS YP_003256627.1 261868705 8537773 1974057..1974557 1 NC_013416.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1974557 8537773 D11S_2054 Aggregatibacter actinomycetemcomitans D11S-1 ribonuclease activity regulator protein RraA YP_003256627.1 1974057 D 668336 CDS YP_003256628.1 261868706 8537774 1974578..1974742 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1974742 8537774 D11S_2055 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256628.1 1974578 D 668336 CDS YP_003256629.1 261868707 8537775 1974747..1975712 1 NC_013416.1 identified by Glimmer3; putative; transporter, NadC family 1975712 8537775 D11S_2056 Aggregatibacter actinomycetemcomitans D11S-1 transporter, NadC family YP_003256629.1 1974747 D 668336 CDS YP_003256630.1 261868708 8537776 complement(1975686..1976219) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1976219 8537776 D11S_2057 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256630.1 1975686 R 668336 CDS YP_003256631.1 261868709 8537777 1976340..1977701 1 NC_013416.1 identified by Glimmer3; putative; PmbA protein 1977701 8537777 D11S_2058 Aggregatibacter actinomycetemcomitans D11S-1 PmbA protein YP_003256631.1 1976340 D 668336 CDS YP_003256632.1 261868710 8537778 1977940..1978479 1 NC_013416.1 identified by Glimmer3; putative; hypoxanthine-guanine phosphoribosyltransferase 1978479 8537778 D11S_2059 Aggregatibacter actinomycetemcomitans D11S-1 hypoxanthine-guanine phosphoribosyltransferase YP_003256632.1 1977940 D 668336 CDS YP_003256633.1 261868711 8537779 complement(1978549..1979688) 1 NC_013416.1 identified by Glimmer3; putative; glycerate kinase 1979688 8537779 D11S_2060 Aggregatibacter actinomycetemcomitans D11S-1 glycerate kinase YP_003256633.1 1978549 R 668336 CDS YP_003256634.1 261868712 8537780 complement(1979685..1980959) 1 NC_013416.1 identified by Glimmer3; putative; gluconate:H+ symporter transporter 1980959 8537780 D11S_2061 Aggregatibacter actinomycetemcomitans D11S-1 gluconate:H+ symporter transporter YP_003256634.1 1979685 R 668336 CDS YP_003256635.1 261868713 8537781 complement(1981091..1982194) 1 NC_013416.1 identified by Glimmer3; putative; carbohydrate diacid regulator 1982194 8537781 D11S_2062 Aggregatibacter actinomycetemcomitans D11S-1 carbohydrate diacid regulator YP_003256635.1 1981091 R 668336 CDS YP_003256636.1 261868714 8537782 1982415..1983110 1 NC_013416.1 identified by Glimmer3; putative; nucleotide sugar dehydrogenase 1983110 8537782 D11S_2063 Aggregatibacter actinomycetemcomitans D11S-1 nucleotide sugar dehydrogenase YP_003256636.1 1982415 D 668336 CDS YP_003256637.1 261868715 8537783 complement(1983194..1984981) 1 NC_013416.1 identified by Glimmer3; putative; cold-shock deAd box protein a 1984981 8537783 D11S_2064 Aggregatibacter actinomycetemcomitans D11S-1 cold-shock deAd box protein a YP_003256637.1 1983194 R 668336 CDS YP_003256638.1 261868716 8537784 complement(1985108..1986010) 1 NC_013416.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 1986010 8537784 D11S_2065 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein NlpI YP_003256638.1 1985108 R 668336 CDS YP_003256639.1 261868717 8537785 complement(1986095..1988326) 1 NC_013416.1 identified by Glimmer3; putative; polynucleotide phosphorylase/polyadenylase 1988326 8537785 D11S_2066 Aggregatibacter actinomycetemcomitans D11S-1 polynucleotide phosphorylase/polyadenylase YP_003256639.1 1986095 R 668336 CDS YP_003256640.1 261868718 8537786 1988518..1988988 1 NC_013416.1 identified by Glimmer3; putative; EbgC protein 1988988 8537786 D11S_2067 Aggregatibacter actinomycetemcomitans D11S-1 EbgC protein YP_003256640.1 1988518 D 668336 CDS YP_003256641.1 261868719 8537787 complement(1988977..1989102) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 1989102 8537787 D11S_2068 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256641.1 1988977 R 668336 CDS YP_003256642.1 261868720 8537788 complement(1989462..1990115) 1 NC_013416.1 identified by Glimmer3; putative; N-acetyl-anhydromuranmyl-L-alanine amidase 1990115 8537788 D11S_2069 Aggregatibacter actinomycetemcomitans D11S-1 N-acetyl-anhydromuranmyl-L-alanine amidase YP_003256642.1 1989462 R 668336 CDS YP_003256643.1 261868721 8537789 1990138..1990590 1 NC_013416.1 identified by Glimmer3; putative; PilA 1990590 8537789 D11S_2070 Aggregatibacter actinomycetemcomitans D11S-1 PilA YP_003256643.1 1990138 D 668336 CDS YP_003256644.1 261868722 8537790 1990617..1992026 1 NC_013416.1 identified by Glimmer3; putative; type IV pilus assembly protein 1992026 8537790 D11S_2071 Aggregatibacter actinomycetemcomitans D11S-1 type IV pilus assembly protein YP_003256644.1 1990617 D 668336 CDS YP_003256645.1 261868723 8537791 1992019..1993242 1 NC_013416.1 identified by Glimmer3; putative; PilC 1993242 8537791 D11S_2072 Aggregatibacter actinomycetemcomitans D11S-1 PilC YP_003256645.1 1992019 D 668336 CDS YP_003256646.1 261868724 8537792 1993242..1993928 1 NC_013416.1 identified by Glimmer3; putative; HopD 1993928 8537792 D11S_2073 Aggregatibacter actinomycetemcomitans D11S-1 HopD YP_003256646.1 1993242 D 668336 CDS YP_003256647.1 261868725 8537793 1993978..1994601 1 NC_013416.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1994601 coaE 8537793 coaE Aggregatibacter actinomycetemcomitans D11S-1 dephospho-CoA kinase YP_003256647.1 1993978 D 668336 CDS YP_003256648.1 261868726 8537794 1994591..1994803 1 NC_013416.1 identified by Glimmer3; putative; zinc-binding protein 1994803 8537794 D11S_2075 Aggregatibacter actinomycetemcomitans D11S-1 zinc-binding protein YP_003256648.1 1994591 D 668336 CDS YP_003256649.1 261868727 8537795 1994803..1995075 1 NC_013416.1 identified by Glimmer3; putative; acetyltransferase 1995075 8537795 D11S_2076 Aggregatibacter actinomycetemcomitans D11S-1 acetyltransferase YP_003256649.1 1994803 D 668336 CDS YP_003256650.1 261868728 8537796 1995472..1996845 1 NC_013416.1 identified by Glimmer3; putative; AlsT protein 1996845 8537796 D11S_2077 Aggregatibacter actinomycetemcomitans D11S-1 AlsT protein YP_003256650.1 1995472 D 668336 CDS YP_003256651.1 261868729 8537797 1997074..1997397 1 NC_013416.1 identified by Glimmer3; putative; sigma 54 modulation protein/ribosomal protein S30EA 1997397 8537797 D11S_2078 Aggregatibacter actinomycetemcomitans D11S-1 sigma 54 modulation protein/ribosomal protein S30EA YP_003256651.1 1997074 D 668336 CDS YP_003256652.1 261868730 8537798 1997546..1998100 1 NC_013416.1 identified by Glimmer3; putative; naphthoate synthase 1998100 8537798 D11S_2079 Aggregatibacter actinomycetemcomitans D11S-1 naphthoate synthase YP_003256652.1 1997546 D 668336 CDS YP_003256653.1 261868731 8537799 complement(1998716..1999015) 1 NC_013416.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 1999015 fis 8537799 fis Aggregatibacter actinomycetemcomitans D11S-1 DNA-binding protein Fis YP_003256653.1 1998716 R 668336 CDS YP_003256654.1 261868732 8537800 complement(1999009..2000058) 1 NC_013416.1 identified by Glimmer3; putative; tRNA-dihydrouridine synthase B 2000058 8537800 D11S_2081 Aggregatibacter actinomycetemcomitans D11S-1 tRNA-dihydrouridine synthase B YP_003256654.1 1999009 R 668336 CDS YP_003256655.1 261868733 8537801 complement(2000303..2001187) 1 NC_013416.1 identified by Glimmer3; putative; ribosomal protein L11 methyltransferase 2001187 8537801 D11S_2082 Aggregatibacter actinomycetemcomitans D11S-1 ribosomal protein L11 methyltransferase YP_003256655.1 2000303 R 668336 CDS YP_003256656.1 261868734 8537802 complement(2001200..2001742) 1 NC_013416.1 identified by Glimmer3; putative; sodium/panthothenate symporter 2001742 8537802 D11S_2083 Aggregatibacter actinomycetemcomitans D11S-1 sodium/panthothenate symporter YP_003256656.1 2001200 R 668336 CDS YP_003256657.1 261868735 8537803 complement(2001761..2003197) 1 NC_013416.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 2003197 panF 8537803 panF Aggregatibacter actinomycetemcomitans D11S-1 sodium/panthothenate symporter YP_003256657.1 2001761 R 668336 CDS YP_003256658.1 261868736 8537804 complement(2003194..2003466) 1 NC_013416.1 identified by Glimmer3; putative; acetyl-CoA carboxylase biotin carboxylase subunit 2003466 8537804 D11S_2085 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA carboxylase biotin carboxylase subunit YP_003256658.1 2003194 R 668336 CDS YP_003256659.1 261868737 8537805 complement(2003490..2004878) 1 NC_013416.1 identified by Glimmer3; putative; chromosomal replication initiation protein 2004878 8537805 D11S_2086 Aggregatibacter actinomycetemcomitans D11S-1 chromosomal replication initiation protein YP_003256659.1 2003490 R 668336 CDS YP_003256660.1 261868738 8537806 complement(2004997..2005761) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2005761 8537806 D11S_2087 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256660.1 2004997 R 668336 CDS YP_003256661.1 261868739 8537807 complement(2005816..2005950) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2005950 8537807 D11S_2088 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256661.1 2005816 R 668336 CDS YP_003256662.1 261868740 8537808 complement(2006059..2007405) 1 NC_013416.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2007405 8537808 D11S_2089 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA carboxylase biotin carboxylase subunit YP_003256662.1 2006059 R 668336 CDS YP_003256663.1 261868741 8537809 complement(2007448..2007915) 1 NC_013416.1 identified by Glimmer3; putative; acetyl-CoA carboxylase, biotin carboxyl carrier protein 2007915 8537809 D11S_2090 Aggregatibacter actinomycetemcomitans D11S-1 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_003256663.1 2007448 R 668336 CDS YP_003256664.1 261868742 8537810 2007932..2008084 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2008084 8537810 D11S_2091 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256664.1 2007932 D 668336 CDS YP_003256665.1 261868743 8537811 complement(2008039..2008515) 1 NC_013416.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2008515 8537811 D11S_2092 Aggregatibacter actinomycetemcomitans D11S-1 3-dehydroquinate dehydratase YP_003256665.1 2008039 R 668336 CDS YP_003256666.1 261868744 8537812 complement(2008614..2009615) 1 NC_013416.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 2009615 8537812 D11S_2093 Aggregatibacter actinomycetemcomitans D11S-1 O-succinylbenzoate synthase YP_003256666.1 2008614 R 668336 CDS YP_003256667.1 261868745 8537813 complement(2009596..2009925) 1 NC_013416.1 identified by Glimmer3; putative; DNA polymerase, beta domain-containing protein 2009925 8537813 D11S_2094 Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase, beta domain-containing protein YP_003256667.1 2009596 R 668336 CDS YP_003256668.1 261868746 8537814 complement(2009907..2010326) 1 NC_013416.1 identified by Glimmer3; putative; similar to HI0074; Nucleotidyltransferase substrate binding protein 2010326 8537814 D11S_2095 Aggregatibacter actinomycetemcomitans D11S-1 Nucleotidyltransferase substrate binding protein YP_003256668.1 2009907 R 668336 CDS YP_003256669.1 261868747 8537815 complement(2010366..2011223) 1 NC_013416.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 2011223 8537815 D11S_2096 Aggregatibacter actinomycetemcomitans D11S-1 naphthoate synthase YP_003256669.1 2010366 R 668336 CDS YP_003256670.1 261868748 8537816 complement(2011335..2012102) 1 NC_013416.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 2012102 tpiA 8537816 tpiA Aggregatibacter actinomycetemcomitans D11S-1 triosephosphate isomerase YP_003256670.1 2011335 R 668336 CDS YP_003256671.1 261868749 8537817 2012275..2012718 1 NC_013416.1 identified by Glimmer3; putative; WecD protein 2012718 8537817 D11S_2098 Aggregatibacter actinomycetemcomitans D11S-1 WecD protein YP_003256671.1 2012275 D 668336 CDS YP_003256672.1 261868750 8537818 complement(2012792..2014159) 1 NC_013416.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2014159 8537818 D11S_2099 Aggregatibacter actinomycetemcomitans D11S-1 coproporphyrinogen III oxidase YP_003256672.1 2012792 R 668336 CDS YP_003256673.1 261868751 8537819 complement(2014178..2014612) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2014612 8537819 D11S_2100 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256673.1 2014178 R 668336 CDS YP_003256674.1 261868752 8537820 complement(2014625..2015185) 1 NC_013416.1 identified by Glimmer3; putative protein in HemN 3'region; hypothetical protein 2015185 8537820 D11S_2101 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256674.1 2014625 R 668336 CDS YP_003256675.1 261868753 8537821 complement(2015286..2015813) 1 NC_013416.1 identified by Glimmer3; putative; tRNA-specific adenosine deaminase 2015813 8537821 D11S_2102 Aggregatibacter actinomycetemcomitans D11S-1 tRNA-specific adenosine deaminase YP_003256675.1 2015286 R 668336 CDS YP_003256676.1 261868754 8537822 complement(2016139..2016990) 1 NC_013416.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2016990 thyA 8537822 thyA Aggregatibacter actinomycetemcomitans D11S-1 thymidylate synthase YP_003256676.1 2016139 R 668336 CDS YP_003256677.1 261868755 8537823 complement(2016987..2017784) 1 NC_013416.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2017784 8537823 D11S_2104 Aggregatibacter actinomycetemcomitans D11S-1 prolipoprotein diacylglyceryl transferase YP_003256677.1 2016987 R 668336 CDS YP_003256678.1 261868756 8537824 complement(2017793..2018590) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2018590 8537824 D11S_2105 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256678.1 2017793 R 668336 CDS YP_003256679.1 261868757 8537825 complement(2018593..2019192) 1 NC_013416.1 identified by Glimmer3; putative; (Di)nucleoside polyphosphate hydrolase 2019192 8537825 D11S_2106 Aggregatibacter actinomycetemcomitans D11S-1 (Di)nucleoside polyphosphate hydrolase YP_003256679.1 2018593 R 668336 CDS YP_003256680.1 261868758 8537826 2019412..2019831 1 NC_013416.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 2019831 8537826 D11S_2107 Aggregatibacter actinomycetemcomitans D11S-1 D-ribose pyranase YP_003256680.1 2019412 D 668336 CDS YP_003256681.1 261868759 8537827 2019842..2021350 1 NC_013416.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP binding protein 2021350 8537827 D11S_2108 Aggregatibacter actinomycetemcomitans D11S-1 D-ribose transporter ATP binding protein YP_003256681.1 2019842 D 668336 CDS YP_003256682.1 261868760 8537828 2021347..2022243 1 NC_013416.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 2022243 rbsC 8537828 rbsC Aggregatibacter actinomycetemcomitans D11S-1 ribose ABC transporter permease YP_003256682.1 2021347 D 668336 CDS YP_003256683.1 261868761 8537829 2022333..2023214 1 NC_013416.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 2023214 8537829 D11S_2110 Aggregatibacter actinomycetemcomitans D11S-1 D-ribose transporter subunit RbsB YP_003256683.1 2022333 D 668336 CDS YP_003256684.1 261868762 8537830 2023297..2024229 1 NC_013416.1 identified by Glimmer3; putative; ribokinase 2024229 8537830 D11S_2111 Aggregatibacter actinomycetemcomitans D11S-1 ribokinase YP_003256684.1 2023297 D 668336 CDS YP_003256685.1 261868763 8537831 complement(2024327..2024536) 1 NC_013416.1 identified by Glimmer3; putative; cold-shock DNA-binding domain-containing protein 2024536 8537831 D11S_2112 Aggregatibacter actinomycetemcomitans D11S-1 cold-shock DNA-binding domain-containing protein YP_003256685.1 2024327 R 668336 CDS YP_003256686.1 261868764 8537832 complement(2024800..2024946) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2024946 8537832 D11S_2113 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256686.1 2024800 R 668336 CDS YP_003256687.1 261868765 8537833 complement(2024983..2026428) 1 NC_013416.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2026428 gltX 8537833 gltX Aggregatibacter actinomycetemcomitans D11S-1 glutamyl-tRNA synthetase YP_003256687.1 2024983 R 668336 CDS YP_003256688.1 261868766 8537837 2027116..2027904 1 NC_013416.1 identified by Glimmer3; putative; glycosyltransferase sugar-binding domain-containing protein 2027904 8537837 D11S_2118 Aggregatibacter actinomycetemcomitans D11S-1 glycosyltransferase sugar-binding domain-containing protein YP_003256688.1 2027116 D 668336 CDS YP_003256689.1 261868767 8537839 2028017..2029393 1 NC_013416.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2029393 8537839 D11S_2119 Aggregatibacter actinomycetemcomitans D11S-1 argininosuccinate lyase YP_003256689.1 2028017 D 668336 CDS YP_003256690.1 261868768 8537840 2029694..2031043 1 NC_013416.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 2031043 8537840 D11S_2120 Aggregatibacter actinomycetemcomitans D11S-1 glutamate dehydrogenase YP_003256690.1 2029694 D 668336 CDS YP_003256691.1 261868769 8537841 2031532..2032986 1 NC_013416.1 identified by Glimmer3; putative; catalase 2032986 8537841 D11S_2121 Aggregatibacter actinomycetemcomitans D11S-1 catalase YP_003256691.1 2031532 D 668336 CDS YP_003256692.1 261868770 8537842 complement(2033660..2033818) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2033818 8537842 D11S_2122 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256692.1 2033660 R 668336 CDS YP_003256693.1 261868771 8537843 complement(2034116..2037592) 1 NC_013416.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 2037592 dnaE 8537843 dnaE Aggregatibacter actinomycetemcomitans D11S-1 DNA polymerase III subunit alpha YP_003256693.1 2034116 R 668336 CDS YP_003256694.1 261868772 8537844 2037557..2037736 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2037736 8537844 D11S_2124 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256694.1 2037557 D 668336 CDS YP_003256695.1 261868773 8537845 2037791..2039578 1 NC_013416.1 identified by Glimmer3; putative; putative long-chain-fatty-acid--CoA ligase-like protein 2039578 8537845 D11S_2125 Aggregatibacter actinomycetemcomitans D11S-1 putative long-chain-fatty-acid--CoA ligase-like protein YP_003256695.1 2037791 D 668336 CDS YP_003256696.1 261868774 8537846 2039595..2039711 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2039711 8537846 D11S_2126 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256696.1 2039595 D 668336 CDS YP_003256697.1 261868775 8537847 2040461..2045824 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2045824 8537847 D11S_2127 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256697.1 2040461 D 668336 CDS YP_003256698.1 261868776 8537848 2046078..2048204 1 NC_013416.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2048204 8537848 D11S_2128 Aggregatibacter actinomycetemcomitans D11S-1 anaerobic ribonucleoside triphosphate reductase YP_003256698.1 2046078 D 668336 CDS YP_003256699.1 261868777 8537849 2048385..2048504 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2048504 8537849 D11S_2129 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256699.1 2048385 D 668336 CDS YP_003256700.1 261868778 8537850 complement(2048647..2048772) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2048772 8537850 D11S_2130 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256700.1 2048647 R 668336 CDS YP_003256701.1 261868779 8537851 2048806..2049273 1 NC_013416.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 2049273 nrdG 8537851 nrdG Aggregatibacter actinomycetemcomitans D11S-1 anaerobic ribonucleotide reductase-activating protein YP_003256701.1 2048806 D 668336 CDS YP_003256702.1 261868780 8537852 complement(2049300..2050088) 1 NC_013416.1 identified by Glimmer3; putative; putative deoxyribonuclease YjjV 2050088 8537852 D11S_2132 Aggregatibacter actinomycetemcomitans D11S-1 putative deoxyribonuclease YjjV YP_003256702.1 2049300 R 668336 CDS YP_003256703.1 261868781 8537853 complement(2050091..2050372) 1 NC_013416.1 identified by Glimmer3; putative; plasmid stabilization system protein 2050372 8537853 D11S_2133 Aggregatibacter actinomycetemcomitans D11S-1 plasmid stabilization system protein YP_003256703.1 2050091 R 668336 CDS YP_003256704.1 261868782 8537854 complement(2050365..2050520) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2050520 8537854 D11S_2134 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256704.1 2050365 R 668336 CDS YP_003256705.1 261868783 8537855 complement(2050614..2051126) 1 NC_013416.1 identified by Glimmer3; putative; peptidyl-prolyl cis-trans isomerase B 2051126 8537855 D11S_2135 Aggregatibacter actinomycetemcomitans D11S-1 peptidyl-prolyl cis-trans isomerase B YP_003256705.1 2050614 R 668336 CDS YP_003256706.1 261868784 8537856 2051196..2052605 1 NC_013416.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 2052605 cysS 8537856 cysS Aggregatibacter actinomycetemcomitans D11S-1 cysteinyl-tRNA synthetase YP_003256706.1 2051196 D 668336 CDS YP_003256707.1 261868785 8537857 complement(2052753..2053715) 1 NC_013416.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2053715 8537857 D11S_2137 Aggregatibacter actinomycetemcomitans D11S-1 lipoyl synthase YP_003256707.1 2052753 R 668336 CDS YP_003256708.1 261868786 8537858 complement(2053780..2054418) 1 NC_013416.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 2054418 8537858 D11S_2138 Aggregatibacter actinomycetemcomitans D11S-1 lipoate-protein ligase B YP_003256708.1 2053780 R 668336 CDS YP_003256709.1 261868787 8537859 complement(2054464..2054763) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2054763 8537859 D11S_2139 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256709.1 2054464 R 668336 CDS YP_003256710.1 261868788 8537860 complement(2054836..2056026) 1 NC_013416.1 identified by Glimmer3; putative; DacC protein 2056026 8537860 D11S_2140 Aggregatibacter actinomycetemcomitans D11S-1 DacC protein YP_003256710.1 2054836 R 668336 CDS YP_003256711.1 261868789 8537861 complement(2056057..2056914) 1 NC_013416.1 identified by Glimmer3; putative; lipoprotein 2056914 8537861 D11S_2141 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003256711.1 2056057 R 668336 CDS YP_003256712.1 261868790 8537862 complement(2056963..2058084) 1 NC_013416.1 identified by Glimmer3; putative; rod shape-determining protein RodA 2058084 8537862 D11S_2142 Aggregatibacter actinomycetemcomitans D11S-1 rod shape-determining protein RodA YP_003256712.1 2056963 R 668336 CDS YP_003256713.1 261868791 8537863 complement(2058071..2060032) 1 NC_013416.1 identified by Glimmer3; putative; penicillin-binding protein 2 2060032 8537863 D11S_2143 Aggregatibacter actinomycetemcomitans D11S-1 penicillin-binding protein 2 YP_003256713.1 2058071 R 668336 CDS YP_003256714.1 261868792 8537864 complement(2060045..2060581) 1 NC_013416.1 identified by Glimmer3; putative; SPOUT methyltransferase superfamily protein 2060581 8537864 D11S_2144 Aggregatibacter actinomycetemcomitans D11S-1 SPOUT methyltransferase superfamily protein YP_003256714.1 2060045 R 668336 CDS YP_003256715.1 261868793 8537865 complement(2060572..2060880) 1 NC_013416.1 identified by Glimmer3; putative; iojap-like protein 2060880 8537865 D11S_2145 Aggregatibacter actinomycetemcomitans D11S-1 iojap-like protein YP_003256715.1 2060572 R 668336 CDS YP_003256716.1 261868794 8537866 complement(2060947..2062203) 1 NC_013416.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 2062203 8537866 D11S_2146 Aggregatibacter actinomycetemcomitans D11S-1 ATP-dependent RNA helicase RhlB YP_003256716.1 2060947 R 668336 CDS YP_003256717.1 261868795 8537867 2062528..2063766 1 NC_013416.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 2063766 rho 8537867 rho Aggregatibacter actinomycetemcomitans D11S-1 transcription termination factor Rho YP_003256717.1 2062528 D 668336 CDS YP_003256718.1 261868796 8537868 complement(2063891..2065126) 1 NC_013416.1 identified by Glimmer3; putative; transporter protein 2065126 8537868 D11S_2148 Aggregatibacter actinomycetemcomitans D11S-1 transporter protein YP_003256718.1 2063891 R 668336 CDS YP_003256719.1 261868797 8537869 2065213..2065326 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2065326 8537869 D11S_2149 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256719.1 2065213 D 668336 CDS YP_003256720.1 261868798 8537870 complement(2065361..2065591) 1 NC_013416.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2065591 acpP 8537870 acpP Aggregatibacter actinomycetemcomitans D11S-1 acyl carrier protein YP_003256720.1 2065361 R 668336 CDS YP_003256721.1 261868799 8537871 complement(2065865..2066593) 1 NC_013416.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 2066593 fabG 8537871 fabG Aggregatibacter actinomycetemcomitans D11S-1 3-ketoacyl-(acyl-carrier-protein) reductase YP_003256721.1 2065865 R 668336 CDS YP_003256722.1 261868800 8537872 complement(2066618..2067556) 1 NC_013416.1 identified by Glimmer3; putative; malonyl CoA-acyl carrier protein transacylase 2067556 8537872 D11S_2152 Aggregatibacter actinomycetemcomitans D11S-1 malonyl CoA-acyl carrier protein transacylase YP_003256722.1 2066618 R 668336 CDS YP_003256723.1 261868801 8537873 complement(2067663..2068613) 1 NC_013416.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 2068613 8537873 D11S_2153 Aggregatibacter actinomycetemcomitans D11S-1 3-oxoacyl-(acyl carrier protein) synthase III YP_003256723.1 2067663 R 668336 CDS YP_003256724.1 261868802 8537874 complement(2068660..2069679) 1 NC_013416.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 2069679 8537874 D11S_2154 Aggregatibacter actinomycetemcomitans D11S-1 putative glycerol-3-phosphate acyltransferase PlsX YP_003256724.1 2068660 R 668336 CDS YP_003256725.1 261868803 8537875 complement(2069706..2069876) 1 NC_013416.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2069876 rpmF 8537875 rpmF Aggregatibacter actinomycetemcomitans D11S-1 50S ribosomal protein L32 YP_003256725.1 2069706 R 668336 CDS YP_003256726.1 261868804 8537876 complement(2069893..2070417) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2070417 8537876 D11S_2156 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256726.1 2069893 R 668336 CDS YP_003256727.1 261868805 8537877 complement(2070489..2071016) 1 NC_013416.1 identified by Glimmer3; putative; dethiobiotin synthase 2071016 8537877 D11S_2157 Aggregatibacter actinomycetemcomitans D11S-1 dethiobiotin synthase YP_003256727.1 2070489 R 668336 CDS YP_003256728.1 261868806 8537878 complement(2071125..2071865) 1 NC_013416.1 identified by Glimmer3; putative; biotin biosynthesis protein BioC 2071865 8537878 D11S_2158 Aggregatibacter actinomycetemcomitans D11S-1 biotin biosynthesis protein BioC YP_003256728.1 2071125 R 668336 CDS YP_003256729.1 261868807 8537879 complement(2071883..2072464) 1 NC_013416.1 identified by Glimmer3; putative; dithiobiotin synthetase 2072464 8537879 D11S_2159 Aggregatibacter actinomycetemcomitans D11S-1 dithiobiotin synthetase YP_003256729.1 2071883 R 668336 CDS YP_003256730.1 261868808 8537880 complement(2072920..2073177) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2073177 8537880 D11S_2160 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256730.1 2072920 R 668336 CDS YP_003256731.1 261868809 8537881 complement(2073251..2073457) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2073457 8537881 D11S_2161 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256731.1 2073251 R 668336 CDS YP_003256732.1 261868810 8537882 complement(2073458..2073799) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2073799 8537882 D11S_2162 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256732.1 2073458 R 668336 CDS YP_003256733.1 261868811 8537883 complement(2073959..2074648) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2074648 8537883 D11S_2163 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256733.1 2073959 R 668336 CDS YP_003256734.1 261868812 8537884 complement(2074666..2074932) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2074932 8537884 D11S_2164 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256734.1 2074666 R 668336 CDS YP_003256735.1 261868813 8537885 complement(2075099..2075929) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2075929 8537885 D11S_2165 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256735.1 2075099 R 668336 CDS YP_003256736.1 261868814 8537886 complement(2076055..2078838) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2078838 8537886 D11S_2166 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256736.1 2076055 R 668336 CDS YP_003256737.1 261868815 8537887 complement(2078838..2079014) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2079014 8537887 D11S_2167 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256737.1 2078838 R 668336 CDS YP_003256738.1 261868816 8537888 complement(2079048..2079293) 1 NC_013416.1 identified by Glimmer3; putative; tail assembly protein 2079293 8537888 D11S_2168 Aggregatibacter actinomycetemcomitans D11S-1 tail assembly protein YP_003256738.1 2079048 R 668336 CDS YP_003256739.1 261868817 8537889 complement(2079306..2080115) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2080115 8537889 D11S_2169 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256739.1 2079306 R 668336 CDS YP_003256740.1 261868818 8537890 complement(2080179..2081858) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2081858 8537890 D11S_2170 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256740.1 2080179 R 668336 CDS YP_003256741.1 261868819 8537891 complement(2081862..2082845) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2082845 8537891 D11S_2171 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256741.1 2081862 R 668336 CDS YP_003256742.1 261868820 8537892 complement(2082845..2083801) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2083801 8537892 D11S_2172 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256742.1 2082845 R 668336 CDS YP_003256743.1 261868821 8537893 complement(2083809..2087093) 1 NC_013416.1 identified by Glimmer3; putative; tail length tape measure protein 2087093 8537893 D11S_2173 Aggregatibacter actinomycetemcomitans D11S-1 tail length tape measure protein YP_003256743.1 2083809 R 668336 CDS YP_003256744.1 261868822 8537894 2087106..2087321 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2087321 8537894 D11S_2174 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256744.1 2087106 D 668336 CDS YP_003256745.1 261868823 8537895 complement(2087337..2087522) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2087522 8537895 D11S_2175 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256745.1 2087337 R 668336 CDS YP_003256746.1 261868824 8537896 complement(2087525..2087950) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2087950 8537896 D11S_2176 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256746.1 2087525 R 668336 CDS YP_003256747.1 261868825 8537897 complement(2088036..2088782) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2088782 8537897 D11S_2177 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256747.1 2088036 R 668336 CDS YP_003256748.1 261868826 8537898 complement(2088769..2088960) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2088960 8537898 D11S_2178 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256748.1 2088769 R 668336 CDS YP_003256749.1 261868827 8537899 complement(2088962..2089396) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2089396 8537899 D11S_2179 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256749.1 2088962 R 668336 CDS YP_003256750.1 261868828 8537900 complement(2089396..2089803) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like prophage protein GP36 2089803 8537900 D11S_2180 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like prophage protein GP36 YP_003256750.1 2089396 R 668336 CDS YP_003256751.1 261868829 8537901 complement(2089803..2090234) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2090234 8537901 D11S_2181 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256751.1 2089803 R 668336 CDS YP_003256752.1 261868830 8537902 complement(2090311..2091237) 1 NC_013416.1 identified by Glimmer3; putative; putative phage major head subunit 2091237 8537902 D11S_2182 Aggregatibacter actinomycetemcomitans D11S-1 putative phage major head subunit YP_003256752.1 2090311 R 668336 CDS YP_003256753.1 261868831 8537903 complement(2091230..2092309) 1 NC_013416.1 identified by Glimmer3; putative; I protein 2092309 8537903 D11S_2183 Aggregatibacter actinomycetemcomitans D11S-1 I protein YP_003256753.1 2091230 R 668336 CDS YP_003256754.1 261868832 8537904 complement(2092509..2092952) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage G protein 1 2092952 8537904 D11S_2184 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage G protein 1 YP_003256754.1 2092509 R 668336 CDS YP_003256755.1 261868833 8537905 complement(2093087..2094391) 1 NC_013416.1 identified by Glimmer3; putative; F protein 2094391 8537905 D11S_2185 Aggregatibacter actinomycetemcomitans D11S-1 F protein YP_003256755.1 2093087 R 668336 CDS YP_003256756.1 261868834 8537906 complement(2094399..2095973) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage gp29 2095973 8537906 D11S_2186 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage gp29 YP_003256756.1 2094399 R 668336 CDS YP_003256757.1 261868835 8537907 complement(2095983..2097587) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage gp28 2097587 8537907 D11S_2187 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage gp28 YP_003256757.1 2095983 R 668336 CDS YP_003256758.1 261868836 8537908 complement(2097587..2098162) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage gp27 2098162 8537908 D11S_2188 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage gp27 YP_003256758.1 2097587 R 668336 CDS YP_003256759.1 261868837 8537909 complement(2098185..2098484) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage gp26 2098484 8537909 D11S_2189 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage gp26 YP_003256759.1 2098185 R 668336 CDS YP_003256760.1 261868838 8537910 complement(2098488..2098823) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage gp25 2098823 8537910 D11S_2190 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage gp25 YP_003256760.1 2098488 R 668336 CDS YP_003256761.1 261868839 8537911 complement(2098820..2099038) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2099038 8537911 D11S_2191 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256761.1 2098820 R 668336 CDS YP_003256762.1 261868840 8537912 complement(2099031..2099195) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2099195 8537912 D11S_2192 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256762.1 2099031 R 668336 CDS YP_003256763.1 261868841 8537913 complement(2099158..2099442) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2099442 8537913 D11S_2193 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256763.1 2099158 R 668336 CDS YP_003256764.1 261868842 8537914 complement(2099435..2099668) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2099668 8537914 D11S_2194 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256764.1 2099435 R 668336 CDS YP_003256765.1 261868843 8537915 complement(2099971..2100516) 1 NC_013416.1 identified by Glimmer3; putative; putative N-acetylmuramoyl-L-alanine amidase 2100516 8537915 D11S_2195 Aggregatibacter actinomycetemcomitans D11S-1 putative N-acetylmuramoyl-L-alanine amidase YP_003256765.1 2099971 R 668336 CDS YP_003256766.1 261868844 8537916 complement(2100599..2101018) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage C protein, positive regulator of late transcription 2101018 8537916 D11S_2196 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage C protein, positive regulator of late transcription YP_003256766.1 2100599 R 668336 CDS YP_003256767.1 261868845 8537917 complement(2101015..2101476) 1 NC_013416.1 identified by Glimmer3; putative; Mu-like phage E16 protein 2101476 8537917 D11S_2197 Aggregatibacter actinomycetemcomitans D11S-1 Mu-like phage E16 protein YP_003256767.1 2101015 R 668336 CDS YP_003256768.1 261868846 8537918 complement(2101454..2101996) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2101996 8537918 D11S_2198 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256768.1 2101454 R 668336 CDS YP_003256769.1 261868847 8537919 complement(2102593..2103072) 1 NC_013416.1 identified by Glimmer3; putative; metal dependent phosphohydrolase 2103072 8537919 D11S_2199 Aggregatibacter actinomycetemcomitans D11S-1 metal dependent phosphohydrolase YP_003256769.1 2102593 R 668336 CDS YP_003256770.1 261868848 8537920 2103079..2103192 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2103192 8537920 D11S_2200 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256770.1 2103079 D 668336 CDS YP_003256771.1 261868849 8537921 complement(2103172..2103732) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2103732 8537921 D11S_2201 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256771.1 2103172 R 668336 CDS YP_003256772.1 261868850 8537922 complement(2103751..2104011) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2104011 8537922 D11S_2202 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256772.1 2103751 R 668336 CDS YP_003256773.1 261868851 8537923 complement(2104015..2104560) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2104560 8537923 D11S_2203 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256773.1 2104015 R 668336 CDS YP_003256774.1 261868852 8537924 complement(2104557..2104742) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2104742 8537924 D11S_2204 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256774.1 2104557 R 668336 CDS YP_003256775.1 261868853 8537925 complement(2104739..2104906) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2104906 8537925 D11S_2205 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256775.1 2104739 R 668336 CDS YP_003256776.1 261868854 8537926 complement(2105050..2105259) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2105259 8537926 D11S_2206 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256776.1 2105050 R 668336 CDS YP_003256777.1 261868855 8537927 complement(2105262..2105465) 1 NC_013416.1 identified by Glimmer3; putative; hypothetical protein 2105465 8537927 D11S_2207 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003256777.1 2105262 R 668336 CDS YP_003264481.1 261876183 8537998 21..437 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 437 8537998 D11S_2274 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264481.1 21 D 668336 CDS YP_003264482.1 261876184 8537956 431..568 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 568 8537956 D11S_2275 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264482.1 431 D 668336 CDS YP_003264483.1 261876185 8537957 652..819 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 819 8537957 D11S_2276 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264483.1 652 D 668336 CDS YP_003264484.1 261876186 8537958 complement(1029..1154) 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 1154 8537958 D11S_2277 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264484.1 1029 R 668336 CDS YP_003264485.1 261876187 8537959 1554..2531 1 NC_013438.1 identified by Glimmer3; putative; replication initiator protein 2531 8537959 D11S_2278 Aggregatibacter actinomycetemcomitans D11S-1 replication initiator protein YP_003264485.1 1554 D 668336 CDS YP_003264486.1 261876188 8537960 2714..2902 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 2902 8537960 D11S_2279 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264486.1 2714 D 668336 CDS YP_003264487.1 261876189 8537961 2902..3564 1 NC_013438.1 identified by Glimmer3; putative; VirB1 3564 8537961 D11S_2280 Aggregatibacter actinomycetemcomitans D11S-1 VirB1 YP_003264487.1 2902 D 668336 CDS YP_003264488.1 261876190 8537962 3577..3909 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 3909 8537962 D11S_2281 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264488.1 3577 D 668336 CDS YP_003264489.1 261876191 8537963 4049..6832 1 NC_013438.1 identified by Glimmer3; putative; ATPase 6832 8537963 D11S_2282 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003264489.1 4049 D 668336 CDS YP_003264490.1 261876192 8537964 6918..7649 1 NC_013438.1 identified by Glimmer3; putative; Cmgb5 7649 8537964 D11S_2283 Aggregatibacter actinomycetemcomitans D11S-1 Cmgb5 YP_003264490.1 6918 D 668336 CDS YP_003264491.1 261876193 8537965 7659..7850 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 7850 8537965 D11S_2284 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264491.1 7659 D 668336 CDS YP_003264492.1 261876194 8537966 7869..8795 1 NC_013438.1 identified by Glimmer3; putative; TriE protein 8795 8537966 D11S_2285 Aggregatibacter actinomycetemcomitans D11S-1 TriE protein YP_003264492.1 7869 D 668336 CDS YP_003264493.1 261876195 8537967 8808..8987 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 8987 8537967 D11S_2286 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264493.1 8808 D 668336 CDS YP_003264494.1 261876196 8537968 8991..9698 1 NC_013438.1 identified by Glimmer3; putative; CmgB8 9698 8537968 D11S_2287 Aggregatibacter actinomycetemcomitans D11S-1 CmgB8 YP_003264494.1 8991 D 668336 CDS YP_003264495.1 261876197 8537969 9710..10597 1 NC_013438.1 identified by Glimmer3; putative; Cmgb9 10597 8537969 D11S_2288 Aggregatibacter actinomycetemcomitans D11S-1 Cmgb9 YP_003264495.1 9710 D 668336 CDS YP_003264496.1 261876198 8537970 10608..11792 1 NC_013438.1 identified by Glimmer3; putative; conjugal transfer protein TrbI/VirB10 11792 8537970 D11S_2289 Aggregatibacter actinomycetemcomitans D11S-1 conjugal transfer protein TrbI/VirB10 YP_003264496.1 10608 D 668336 CDS YP_003264497.1 261876199 8537971 11857..12891 1 NC_013438.1 identified by Glimmer3; putative; ATPase 12891 8537971 D11S_2290 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003264497.1 11857 D 668336 CDS YP_003264498.1 261876200 8537972 12888..13286 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 13286 8537972 D11S_2291 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264498.1 12888 D 668336 CDS YP_003264499.1 261876201 8537973 13333..13713 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 13713 8537973 D11S_2292 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264499.1 13333 D 668336 CDS YP_003264500.1 261876202 8537974 13706..15607 1 NC_013438.1 identified by Glimmer3; putative; conjugal transfer protein TraG/VirD4 15607 8537974 D11S_2293 Aggregatibacter actinomycetemcomitans D11S-1 conjugal transfer protein TraG/VirD4 YP_003264500.1 13706 D 668336 CDS YP_003264501.1 261876203 8537975 15620..16036 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 16036 8537975 D11S_2294 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264501.1 15620 D 668336 CDS YP_003264502.1 261876204 8537976 16048..16371 1 NC_013438.1 identified by Glimmer3; putative; TraR protein 16371 8537976 D11S_2295 Aggregatibacter actinomycetemcomitans D11S-1 TraR protein YP_003264502.1 16048 D 668336 CDS YP_003264503.1 261876205 8537977 16380..16949 1 NC_013438.1 identified by Glimmer3; putative; TrbM mating pair formation protein-like protein 16949 8537977 D11S_2296 Aggregatibacter actinomycetemcomitans D11S-1 TrbM mating pair formation protein-like protein YP_003264503.1 16380 D 668336 CDS YP_003264504.1 261876206 8537978 17274..17417 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 17417 8537978 D11S_2297 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264504.1 17274 D 668336 CDS YP_003264505.1 261876207 8537979 17731..17991 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 17991 8537979 D11S_2298 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264505.1 17731 D 668336 CDS YP_003264506.1 261876208 8537980 18006..18578 1 NC_013438.1 identified by Glimmer3; putative; resolvase/integrase-like protein 18578 8537980 D11S_2299 Aggregatibacter actinomycetemcomitans D11S-1 resolvase/integrase-like protein YP_003264506.1 18006 D 668336 CDS YP_003264507.1 261876209 8537981 18688..18927 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 18927 8537981 D11S_2300 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264507.1 18688 D 668336 CDS YP_003264508.1 261876210 8537982 18937..21219 1 NC_013438.1 identified by Glimmer3; putative; TraE-like protein 21219 8537982 D11S_2301 Aggregatibacter actinomycetemcomitans D11S-1 TraE-like protein YP_003264508.1 18937 D 668336 CDS YP_003264509.1 261876211 8537983 21239..21550 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 21550 8537983 D11S_2302 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264509.1 21239 D 668336 CDS YP_003264510.1 261876212 8537984 21551..21748 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 21748 8537984 D11S_2303 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264510.1 21551 D 668336 CDS YP_003264511.1 261876213 8537985 21778..22182 1 NC_013438.1 identified by Glimmer3; putative; single-strand binding protein 22182 8537985 D11S_2304 Aggregatibacter actinomycetemcomitans D11S-1 single-strand binding protein YP_003264511.1 21778 D 668336 CDS YP_003264512.1 261876214 8537986 complement(22229..22465) 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 22465 8537986 D11S_2305 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264512.1 22229 R 668336 CDS YP_003264513.1 261876215 8537987 22742..22897 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 22897 8537987 D11S_2306 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264513.1 22742 D 668336 CDS YP_003264514.1 261876216 8537988 22906..23523 1 NC_013438.1 identified by Glimmer3; putative; cobyrinic acid a,c-diamide synthase 23523 8537988 D11S_2307 Aggregatibacter actinomycetemcomitans D11S-1 cobyrinic acid a,c-diamide synthase YP_003264514.1 22906 D 668336 CDS YP_003264515.1 261876217 8537989 23565..23738 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 23738 8537989 D11S_2308 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264515.1 23565 D 668336 CDS YP_003264516.1 261876218 8537990 23832..23957 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 23957 8537990 D11S_2309 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264516.1 23832 D 668336 CDS YP_003264517.1 261876219 8537991 complement(23959..25239) 1 NC_013438.1 identified by Glimmer3; putative; nickase 25239 8537991 D11S_2310 Aggregatibacter actinomycetemcomitans D11S-1 nickase YP_003264517.1 23959 R 668336 CDS YP_003264518.1 261876220 8537992 complement(25246..25746) 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 25746 8537992 D11S_2311 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264518.1 25246 R 668336 CDS YP_003264519.1 261876221 8537993 25917..26159 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 26159 8537993 D11S_2312 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264519.1 25917 D 668336 CDS YP_003264520.1 261876222 8537994 26170..27489 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 27489 8537994 D11S_2313 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264520.1 26170 D 668336 CDS YP_003264521.1 261876223 8537995 27514..28977 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 28977 8537995 D11S_2314 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264521.1 27514 D 668336 CDS YP_003264522.1 261876224 8537996 29041..30354 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 30354 8537996 D11S_2315 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264522.1 29041 D 668336 CDS YP_003264523.1 261876225 8537997 30474..30926 1 NC_013438.1 identified by Glimmer3; putative; hypothetical protein 30926 8537997 D11S_2316 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003264523.1 30474 D 668336 CDS YP_003344781.1 273809543 8672843 complement(248..565) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 565 8672843 D11S_2208 Aggregatibacter phage S1249 hypothetical protein YP_003344781.1 248 R 683735 CDS YP_003344782.1 273809544 8672778 complement(534..662) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 662 8672778 D11S_2209 Aggregatibacter phage S1249 hypothetical protein YP_003344782.1 534 R 683735 CDS YP_003344783.1 273809545 8672779 complement(709..1080) 1 NC_013597.1 identified by Glimmer3; putative; putative tail fiber assembly protein 1080 8672779 D11S_2210 Aggregatibacter phage S1249 putative tail fiber assembly protein YP_003344783.1 709 R 683735 CDS YP_003344784.1 273809546 8672780 complement(1080..2564) 1 NC_013597.1 identified by Glimmer3; putative; putative tail fiber protein 2564 8672780 D11S_2211 Aggregatibacter phage S1249 putative tail fiber protein YP_003344784.1 1080 R 683735 CDS YP_003344785.1 273809547 8672781 complement(2575..3150) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 3150 8672781 D11S_2212 Aggregatibacter phage S1249 hypothetical protein YP_003344785.1 2575 R 683735 CDS YP_003344786.1 273809548 8672782 complement(3150..4292) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 4292 8672782 D11S_2213 Aggregatibacter phage S1249 hypothetical protein YP_003344786.1 3150 R 683735 CDS YP_003344787.1 273809549 8672783 complement(4323..4682) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 4682 8672783 D11S_2214 Aggregatibacter phage S1249 hypothetical protein YP_003344787.1 4323 R 683735 CDS YP_003344788.1 273809550 8672784 complement(4679..5323) 1 NC_013597.1 identified by Glimmer3; putative; putative baseplate protein 5323 8672784 D11S_2215 Aggregatibacter phage S1249 putative baseplate protein YP_003344788.1 4679 R 683735 CDS YP_003344789.1 273809551 8672785 complement(5320..6174) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 6174 8672785 D11S_2216 Aggregatibacter phage S1249 hypothetical protein YP_003344789.1 5320 R 683735 CDS YP_003344790.1 273809552 8672786 complement(6190..6369) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 6369 8672786 D11S_2217 Aggregatibacter phage S1249 hypothetical protein YP_003344790.1 6190 R 683735 CDS YP_003344791.1 273809553 8672787 complement(6462..6776) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 6776 8672787 D11S_2218 Aggregatibacter phage S1249 hypothetical protein YP_003344791.1 6462 R 683735 CDS YP_003344792.1 273809554 8672788 complement(6787..7554) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 7554 8672788 D11S_2219 Aggregatibacter phage S1249 hypothetical protein YP_003344792.1 6787 R 683735 CDS YP_003344793.1 273809555 8672789 complement(7558..9642) 1 NC_013597.1 identified by Glimmer3; putative; putative tail length tape measure protein 9642 8672789 D11S_2220 Aggregatibacter phage S1249 putative tail length tape measure protein YP_003344793.1 7558 R 683735 CDS YP_003344794.1 273809556 8672790 complement(9793..10212) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 10212 8672790 D11S_2221 Aggregatibacter phage S1249 hypothetical protein YP_003344794.1 9793 R 683735 CDS YP_003344795.1 273809557 8672791 complement(10212..10643) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 10643 8672791 D11S_2222 Aggregatibacter phage S1249 hypothetical protein YP_003344795.1 10212 R 683735 CDS YP_003344796.1 273809558 8672792 complement(10693..12201) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 12201 8672792 D11S_2223 Aggregatibacter phage S1249 hypothetical protein YP_003344796.1 10693 R 683735 CDS YP_003344797.1 273809559 8672793 complement(12206..12847) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 12847 8672793 D11S_2224 Aggregatibacter phage S1249 hypothetical protein YP_003344797.1 12206 R 683735 CDS YP_003344798.1 273809560 8672794 complement(12633..13004) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 13004 8672794 D11S_2225 Aggregatibacter phage S1249 hypothetical protein YP_003344798.1 12633 R 683735 CDS YP_003344799.1 273809561 8672795 complement(13001..13447) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 13447 8672795 D11S_2226 Aggregatibacter phage S1249 hypothetical protein YP_003344799.1 13001 R 683735 CDS YP_003344800.1 273809562 8672796 complement(13448..13807) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 13807 8672796 D11S_2227 Aggregatibacter phage S1249 hypothetical protein YP_003344800.1 13448 R 683735 CDS YP_003344801.1 273809563 8672797 complement(13818..14732) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 14732 8672797 D11S_2228 Aggregatibacter phage S1249 hypothetical protein YP_003344801.1 13818 R 683735 CDS YP_003344802.1 273809564 8672798 complement(14744..15193) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 15193 8672798 D11S_2229 Aggregatibacter phage S1249 hypothetical protein YP_003344802.1 14744 R 683735 CDS YP_003344803.1 273809565 8672799 complement(15207..16319) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 16319 8672799 D11S_2230 Aggregatibacter phage S1249 hypothetical protein YP_003344803.1 15207 R 683735 CDS YP_003344804.1 273809566 8672800 complement(16379..16801) 1 NC_013597.1 identified by Glimmer3; putative; metal dependent phosphohydrolase, HD region 16801 8672800 D11S_2231 Aggregatibacter phage S1249 metal dependent phosphohydrolase, HD region YP_003344804.1 16379 R 683735 CDS YP_003344805.1 273809567 8672801 complement(16804..17022) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 17022 8672801 D11S_2232 Aggregatibacter phage S1249 hypothetical protein YP_003344805.1 16804 R 683735 CDS YP_003344806.1 273809568 8672802 complement(17019..19292) 1 NC_013597.1 identified by Glimmer3; putative; putative minor head protein 19292 8672802 D11S_2233 Aggregatibacter phage S1249 putative minor head protein YP_003344806.1 17019 R 683735 CDS YP_003344807.1 273809569 8672803 complement(19321..20655) 1 NC_013597.1 identified by Glimmer3; putative; phage-related protein HI1409 20655 8672803 D11S_2234 Aggregatibacter phage S1249 phage-related protein HI1409 YP_003344807.1 19321 R 683735 CDS YP_003344808.1 273809570 8672804 complement(20657..22039) 1 NC_013597.1 identified by Glimmer3; putative; putative terminase large subunit TerL 22039 8672804 D11S_2235 Aggregatibacter phage S1249 putative terminase large subunit TerL YP_003344808.1 20657 R 683735 CDS YP_003344809.1 273809571 8672805 complement(22065..22625) 1 NC_013597.1 identified by Glimmer3; putative; putative terminase small subunit TerS 22625 8672805 D11S_2236 Aggregatibacter phage S1249 putative terminase small subunit TerS YP_003344809.1 22065 R 683735 CDS YP_003344810.1 273809572 8672806 complement(22782..23048) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 23048 8672806 D11S_2237 Aggregatibacter phage S1249 hypothetical protein YP_003344810.1 22782 R 683735 CDS YP_003344811.1 273809573 8672807 complement(23052..23264) 1 NC_013597.1 identified by Glimmer3; putative; putative lytic protein Rz1 23264 8672807 D11S_2238 Aggregatibacter phage S1249 putative lytic protein Rz1 YP_003344811.1 23052 R 683735 CDS YP_003344812.1 273809574 8672808 complement(23245..23577) 1 NC_013597.1 identified by Glimmer3; putative; putative lytic protein Rz 23577 8672808 D11S_2239 Aggregatibacter phage S1249 putative lytic protein Rz YP_003344812.1 23245 R 683735 CDS YP_003344813.1 273809575 8672809 complement(23580..24161) 1 NC_013597.1 identified by Glimmer3; putative; putative Lys protein 24161 8672809 D11S_2240 Aggregatibacter phage S1249 putative Lys protein YP_003344813.1 23580 R 683735 CDS YP_003344814.1 273809576 8672810 complement(24230..24541) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 24541 8672810 D11S_2241 Aggregatibacter phage S1249 hypothetical protein YP_003344814.1 24230 R 683735 CDS YP_003344815.1 273809577 8672811 complement(24504..24872) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 24872 8672811 D11S_2242 Aggregatibacter phage S1249 hypothetical protein YP_003344815.1 24504 R 683735 CDS YP_003344816.1 273809578 8672812 complement(24869..25315) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 25315 8672812 D11S_2243 Aggregatibacter phage S1249 hypothetical protein YP_003344816.1 24869 R 683735 CDS YP_003344817.1 273809579 8672813 complement(25514..26383) 1 NC_013597.1 identified by Glimmer3; putative; putative antirepressor protein Ant 26383 8672813 D11S_2244 Aggregatibacter phage S1249 putative antirepressor protein Ant YP_003344817.1 25514 R 683735 CDS YP_003344818.1 273809580 8672814 complement(26667..27038) 1 NC_013597.1 identified by Glimmer3; putative; putative anti-termination protein Q 27038 8672814 D11S_2245 Aggregatibacter phage S1249 putative anti-termination protein Q YP_003344818.1 26667 R 683735 CDS YP_003344819.1 273809581 8672815 complement(27038..27598) 1 NC_013597.1 identified by Glimmer3; putative; NinG recombination protein 27598 8672815 D11S_2246 Aggregatibacter phage S1249 NinG recombination protein YP_003344819.1 27038 R 683735 CDS YP_003344820.1 273809582 8672816 complement(27598..27801) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 27801 8672816 D11S_2247 Aggregatibacter phage S1249 hypothetical protein YP_003344820.1 27598 R 683735 CDS YP_003344821.1 273809583 8672817 complement(27788..27967) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 27967 8672817 D11S_2248 Aggregatibacter phage S1249 hypothetical protein YP_003344821.1 27788 R 683735 CDS YP_003344822.1 273809584 8672818 complement(27967..28194) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 28194 8672818 D11S_2249 Aggregatibacter phage S1249 hypothetical protein YP_003344822.1 27967 R 683735 CDS YP_003344823.1 273809585 8672819 complement(28191..28688) 1 NC_013597.1 identified by Glimmer3; putative; putative recombination protein NinB 28688 8672819 D11S_2250 Aggregatibacter phage S1249 putative recombination protein NinB YP_003344823.1 28191 R 683735 CDS YP_003344824.1 273809586 8672820 complement(28695..29195) 1 NC_013597.1 identified by Glimmer3; putative; DNA adenine methylase 29195 8672820 D11S_2251 Aggregatibacter phage S1249 DNA adenine methylase YP_003344824.1 28695 R 683735 CDS YP_003344825.1 273809587 8672821 complement(29192..29866) 1 NC_013597.1 identified by Glimmer3; putative; possible bacteriophage replication protein P 29866 8672821 D11S_2252 Aggregatibacter phage S1249 possible bacteriophage replication protein P YP_003344825.1 29192 R 683735 CDS YP_003344826.1 273809588 8672822 complement(29863..30585) 1 NC_013597.1 identified by Glimmer3; putative; replication protein 30585 8672822 D11S_2253 Aggregatibacter phage S1249 replication protein YP_003344826.1 29863 R 683735 CDS YP_003344827.1 273809589 8672823 complement(30582..31289) 1 NC_013597.1 COG3646; identified by Glimmer3; putative; uncharacterized phage-encoded protein 31289 8672823 D11S_2254 Aggregatibacter phage S1249 uncharacterized phage-encoded protein YP_003344827.1 30582 R 683735 CDS YP_003344828.1 273809590 8672824 complement(31342..31458) 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 31458 8672824 D11S_2255 Aggregatibacter phage S1249 hypothetical protein YP_003344828.1 31342 R 683735 CDS YP_003344829.1 273809591 8672825 complement(31538..31777) 1 NC_013597.1 identified by Glimmer3; putative; phage protein 31777 8672825 D11S_2256 Aggregatibacter phage S1249 phage protein YP_003344829.1 31538 R 683735 CDS YP_003344830.1 273809592 8672826 31908..32567 1 NC_013597.1 identified by Glimmer3; putative; cI repressor protein 32567 8672826 D11S_2257 Aggregatibacter phage S1249 cI repressor protein YP_003344830.1 31908 D 683735 CDS YP_003344831.1 273809593 8672827 32592..34289 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 34289 8672827 D11S_2258 Aggregatibacter phage S1249 hypothetical protein YP_003344831.1 32592 D 683735 CDS YP_003344832.1 273809594 8672828 34707..34865 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 34865 8672828 D11S_2259 Aggregatibacter phage S1249 hypothetical protein YP_003344832.1 34707 D 683735 CDS YP_003344833.1 273809595 8672829 35586..35789 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 35789 8672829 D11S_2260 Aggregatibacter phage S1249 hypothetical protein YP_003344833.1 35586 D 683735 CDS YP_003344834.1 273809596 8672830 36265..36705 1 NC_013597.1 identified by Glimmer3; putative; phage-associated protein 36705 8672830 D11S_2261 Aggregatibacter phage S1249 phage-associated protein YP_003344834.1 36265 D 683735 CDS YP_003344835.1 273809597 8672831 36692..37036 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 37036 8672831 D11S_2262 Aggregatibacter phage S1249 hypothetical protein YP_003344835.1 36692 D 683735 CDS YP_003344836.1 273809598 8672832 37748..38401 1 NC_013597.1 identified by Glimmer3; putative; possible bacteriophage antirepressor 38401 8672832 D11S_2263 Aggregatibacter phage S1249 possible bacteriophage antirepressor YP_003344836.1 37748 D 683735 CDS YP_003344837.1 273809599 8672833 38488..38763 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 38763 8672833 D11S_2264 Aggregatibacter phage S1249 hypothetical protein YP_003344837.1 38488 D 683735 CDS YP_003344838.1 273809600 8672834 38768..39007 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 39007 8672834 D11S_2265 Aggregatibacter phage S1249 hypothetical protein YP_003344838.1 38768 D 683735 CDS YP_003344839.1 273809601 8672835 39010..39309 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 39309 8672835 D11S_2266 Aggregatibacter phage S1249 hypothetical protein YP_003344839.1 39010 D 683735 CDS YP_003344840.1 273809602 8672836 39321..40214 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 40214 8672836 D11S_2267 Aggregatibacter phage S1249 hypothetical protein YP_003344840.1 39321 D 683735 CDS YP_003344841.1 273809603 8672837 40211..40834 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 40834 8672837 D11S_2268 Aggregatibacter phage S1249 hypothetical protein YP_003344841.1 40211 D 683735 CDS YP_003344842.1 273809604 8672838 40878..41009 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 41009 8672838 D11S_2269 Aggregatibacter phage S1249 hypothetical protein YP_003344842.1 40878 D 683735 CDS YP_003344843.1 273809605 8672839 41042..41527 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 41527 8672839 D11S_2270 Aggregatibacter phage S1249 hypothetical protein YP_003344843.1 41042 D 683735 CDS YP_003344844.1 273809606 8672840 41594..42250 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 42250 8672840 D11S_2271 Aggregatibacter phage S1249 hypothetical protein YP_003344844.1 41594 D 683735 CDS YP_003344845.1 273809607 8672841 42266..42619 1 NC_013597.1 identified by Glimmer3; putative; hypothetical protein 42619 8672841 D11S_2272 Aggregatibacter phage S1249 hypothetical protein YP_003344845.1 42266 D 683735 CDS YP_003344846.1 273809608 8672842 42856..43902 1 NC_013597.1 identified by Glimmer3; putative; putative integrase 43902 8672842 D11S_2273 Aggregatibacter phage S1249 putative integrase YP_003344846.1 42856 D 683735 CDS YP_003966090.1 312193365 9970327 260..586 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 586 9970327 D11S_2317 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966090.1 260 D 668336 CDS YP_003966091.1 312193366 9970287 complement(583..870) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 870 9970287 D11S_2318 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966091.1 583 R 668336 CDS YP_003966092.1 312193367 9970288 complement(897..1544) 1 NC_014629.1 identified by Glimmer3; putative; lytic transglycosylase catalytic 1544 9970288 D11S_2319 Aggregatibacter actinomycetemcomitans D11S-1 lytic transglycosylase catalytic YP_003966092.1 897 R 668336 CDS YP_003966093.1 312193368 9970289 complement(1560..1997) 1 NC_014629.1 identified by Glimmer3; putative; single-strand binding protein 1997 9970289 D11S_2320 Aggregatibacter actinomycetemcomitans D11S-1 single-strand binding protein YP_003966093.1 1560 R 668336 CDS YP_003966094.1 312193369 9970290 2176..2754 1 NC_014629.1 identified by Glimmer3; putative; site-specific recombinase 2754 9970290 D11S_2321 Aggregatibacter actinomycetemcomitans D11S-1 site-specific recombinase YP_003966094.1 2176 D 668336 CDS YP_003966095.1 312193370 9970291 complement(2758..2898) 1 NC_014629.1 identified by Glimmer3; putative; nickase 2898 9970291 D11S_2322 Aggregatibacter actinomycetemcomitans D11S-1 nickase YP_003966095.1 2758 R 668336 CDS YP_003966096.1 312193371 9970292 complement(2966..3922) 1 NC_014629.1 identified by Glimmer3; putative; nickase 3922 9970292 D11S_2323 Aggregatibacter actinomycetemcomitans D11S-1 nickase YP_003966096.1 2966 R 668336 CDS YP_003966097.1 312193372 9970293 complement(3892..4434) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 4434 9970293 D11S_2324 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966097.1 3892 R 668336 CDS YP_003966098.1 312193373 9970294 4622..4741 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 4741 9970294 D11S_2325 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966098.1 4622 D 668336 CDS YP_003966099.1 312193374 9970295 5049..5333 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 5333 9970295 D11S_2326 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966099.1 5049 D 668336 CDS YP_003966100.1 312193375 9970296 5614..6003 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 6003 9970296 D11S_2327 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966100.1 5614 D 668336 CDS YP_003966101.1 312193376 9970297 6029..6418 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 6418 9970297 D11S_2328 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966101.1 6029 D 668336 CDS YP_003966102.1 312193377 9970298 6375..7085 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 7085 9970298 D11S_2329 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966102.1 6375 D 668336 CDS YP_003966104.1 312193378 9970299 7063..7680 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 7680 9970299 D11S_2331 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966104.1 7063 D 668336 CDS YP_003966105.1 312193379 9970300 7670..7867 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 7867 9970300 D11S_2332 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966105.1 7670 D 668336 CDS YP_003966106.1 312193380 9970301 8146..8334 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 8334 9970301 D11S_2333 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966106.1 8146 D 668336 CDS YP_003966107.1 312193381 9970302 8327..8443 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 8443 9970302 D11S_2334 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966107.1 8327 D 668336 CDS YP_003966108.1 312193382 9970303 complement(8404..8712) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 8712 9970303 D11S_2335 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966108.1 8404 R 668336 CDS YP_003966109.1 312193383 9970304 complement(9019..10026) 1 NC_014629.1 identified by Glimmer3; putative; replication protein 10026 9970304 D11S_2336 Aggregatibacter actinomycetemcomitans D11S-1 replication protein YP_003966109.1 9019 R 668336 CDS YP_003966110.1 312193384 9970305 complement(10038..10166) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 10166 9970305 D11S_2337 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966110.1 10038 R 668336 CDS YP_003966111.1 312193385 9970306 10409..10612 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 10612 9970306 D11S_2338 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966111.1 10409 D 668336 CDS YP_003966112.1 312193386 9970307 complement(10736..10972) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 10972 9970307 D11S_2339 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966112.1 10736 R 668336 CDS YP_003966113.1 312193387 9970308 complement(11082..11357) 1 NC_014629.1 identified by Glimmer3; putative; filamentation induced by cAMP protein Fic-like protein 11357 9970308 D11S_2340 Aggregatibacter actinomycetemcomitans D11S-1 filamentation induced by cAMP protein Fic-like protein YP_003966113.1 11082 R 668336 CDS YP_003966114.1 312193388 9970309 complement(11410..11649) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 11649 9970309 D11S_2341 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966114.1 11410 R 668336 CDS YP_003966115.1 312193389 9970310 complement(11642..12283) 1 NC_014629.1 identified by Glimmer3; putative; partition protein 12283 9970310 D11S_2342 Aggregatibacter actinomycetemcomitans D11S-1 partition protein YP_003966115.1 11642 R 668336 CDS YP_003966116.1 312193390 9970311 complement(12306..12437) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 12437 9970311 D11S_2343 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966116.1 12306 R 668336 CDS YP_003966117.1 312193391 9970312 complement(12434..12583) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 12583 9970312 D11S_2344 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966117.1 12434 R 668336 CDS YP_003966118.1 312193392 9970313 12700..12867 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 12867 9970313 D11S_2345 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966118.1 12700 D 668336 CDS YP_003966119.1 312193393 9970314 12864..13148 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 13148 9970314 D11S_2346 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966119.1 12864 D 668336 CDS YP_003966120.1 312193394 9970315 complement(13225..13557) 1 NC_014629.1 identified by Glimmer3; putative; YggA-like protein 13557 9970315 D11S_2347 Aggregatibacter actinomycetemcomitans D11S-1 YggA-like protein YP_003966120.1 13225 R 668336 CDS YP_003966121.1 312193395 9970316 complement(13541..13978) 1 NC_014629.1 identified by Glimmer3; putative; lipoprotein 13978 9970316 D11S_2348 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003966121.1 13541 R 668336 CDS YP_003966122.1 312193396 9970317 complement(14024..15763) 1 NC_014629.1 identified by Glimmer3; putative; ATPase 15763 9970317 D11S_2349 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003966122.1 14024 R 668336 CDS YP_003966123.1 312193397 9970318 complement(15763..16794) 1 NC_014629.1 identified by Glimmer3; putative; ATPase 16794 9970318 D11S_2350 Aggregatibacter actinomycetemcomitans D11S-1 ATPase YP_003966123.1 15763 R 668336 CDS YP_003966124.1 312193398 9970319 complement(16807..17916) 1 NC_014629.1 identified by Glimmer3; putative; conjugal transfer protein TrbI/VirB10 17916 9970319 D11S_2351 Aggregatibacter actinomycetemcomitans D11S-1 conjugal transfer protein TrbI/VirB10 YP_003966124.1 16807 R 668336 CDS YP_003966125.1 312193399 9970320 complement(17926..18783) 1 NC_014629.1 identified by Glimmer3; putative; P-type conjugative transfer protein VirB9 18783 9970320 D11S_2352 Aggregatibacter actinomycetemcomitans D11S-1 P-type conjugative transfer protein VirB9 YP_003966125.1 17926 R 668336 CDS YP_003966126.1 312193400 9970321 complement(18785..19474) 1 NC_014629.1 identified by Glimmer3; putative; CmgB8 19474 9970321 D11S_2353 Aggregatibacter actinomycetemcomitans D11S-1 CmgB8 YP_003966126.1 18785 R 668336 CDS YP_003966127.1 312193401 9970322 complement(19471..19617) 1 NC_014629.1 identified by Glimmer3; putative; lipoprotein 19617 9970322 D11S_2354 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003966127.1 19471 R 668336 CDS YP_003966128.1 312193402 9970323 complement(19687..20688) 1 NC_014629.1 identified by Glimmer3; putative; TriE protein 20688 9970323 D11S_2355 Aggregatibacter actinomycetemcomitans D11S-1 TriE protein YP_003966128.1 19687 R 668336 CDS YP_003966129.1 312193403 9970324 complement(20700..20924) 1 NC_014629.1 identified by Glimmer3; putative; lipoprotein 20924 9970324 D11S_2356 Aggregatibacter actinomycetemcomitans D11S-1 lipoprotein YP_003966129.1 20700 R 668336 CDS YP_003966130.1 312193404 9970325 complement(20946..21674) 1 NC_014629.1 identified by Glimmer3; putative; transport associated protein 4 21674 9970325 D11S_2357 Aggregatibacter actinomycetemcomitans D11S-1 transport associated protein 4 YP_003966130.1 20946 R 668336 CDS YP_003966131.1 312193405 9970326 complement(21685..23856) 1 NC_014629.1 identified by Glimmer3; putative; hypothetical protein 23856 9970326 D11S_2358 Aggregatibacter actinomycetemcomitans D11S-1 hypothetical protein YP_003966131.1 21685 R 668336 CDS