-- dump date 20240506_055601 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP023032.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP023032.1.REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362xREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinIONREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9 Pseudo Genes (incomplete) :: 3 of 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9 Pseudo Genes (incomplete) :: 3 of 9 Pseudo Genes (internal stop) :: 2 of 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9 Pseudo Genes (incomplete) :: 3 of 9 Pseudo Genes (internal stop) :: 2 of 9 Pseudo Genes (multiple problems) :: 2 of 9REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9 Pseudo Genes (incomplete) :: 3 of 9 Pseudo Genes (internal stop) :: 2 of 9 Pseudo Genes (multiple problems) :: 2 of 9 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP023032.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Method :: Unicycler v. 0.4.7 Genome Coverage :: 362x Sequencing Technology :: Illumina MiSeq; ONT MinION ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 05/07/2023 05:41:45 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.5 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 4,343 CDSs (total) :: 4,221 Genes (coding) :: 4,213 CDSs (with protein) :: 4,213 Genes (RNA) :: 122 rRNAs :: 7, 7, 7 (5S, 16S, 23S) complete rRNAs :: 7, 7, 7 (5S, 16S, 23S) tRNAs :: 97 ncRNAs :: 4 Pseudo Genes (total) :: 9 CDSs (without protein) :: 8 Pseudo Genes (ambiguous residues) :: 0 of 9 Pseudo Genes (frameshifted) :: 5 of 9 Pseudo Genes (incomplete) :: 3 of 9 Pseudo Genes (internal stop) :: 2 of 9 Pseudo Genes (multiple problems) :: 2 of 9 ##Genome-Annotation-Data-END## COMPLETENESS: full length.