-- dump date 20140618_191813 -- class Genbank::CDS -- table cds_note -- id note YP_003097821.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_003097822.1 binds the polymerase to DNA and acts as a sliding clamp YP_003097823.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_003097824.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA YP_003097825.1 PFAM: protein of unknown function DUF721; KEGG: protein of unknown function DUF721 YP_003097826.1 KEGG: bha:BH0006 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003097827.1 negatively supercoils closed circular double-stranded DNA YP_003097828.1 KEGG: hypothetical protein YP_003097830.1 PFAM: DoxX family protein; KEGG: gur:Gura_3338 DoxX family protein YP_003097831.1 KEGG: similar to Host cell factor C1 YP_003097832.1 KEGG: rpt:Rpal_3590 histon H1 YP_003097833.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: bba:Bd0177 peptidyl-prolyl cis-trans isomerase YP_003097834.1 PFAM: rhomboid family protein; KEGG: bsu:BSU24870 hypothetical protein YP_003097836.1 integral membrane protein involved in inhibition of the Z-ring formation YP_003097837.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sus:Acid_5377 sortase family protein YP_003097839.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ade:Adeh_3296 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003097840.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: swi:Swit_3227 anthranilate synthase, component II YP_003097841.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase YP_003097842.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ade:Adeh_3649 serine/threonine protein kinase YP_003097843.1 PFAM: penicillin-binding protein transpeptidase; KEGG: penicillin-binding protein 2; K05515 penicillin binding protein 2 YP_003097844.1 PFAM: cell cycle protein; KEGG: bcb:BCB4264_A4012 stage V sporulation protein E YP_003097845.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: tgr:Tgr7_0952 protein phosphatase 2C-like protein YP_003097846.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: mxa:MXAN_4649 FHA domain protein YP_003097847.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: eba:ebA2155 hypothetical protein YP_003097849.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: xca:xccb100_0085 hypothetical protein YP_003097850.1 KEGG: bur:Bcep18194_B3008 FAD-linked oxidoreductase; TIGRFAM: FAD-linked oxidoreductase; PFAM: D-arabinono-14-lactone oxidase; FAD linked oxidase domain protein YP_003097851.1 PFAM: alanine racemase domain protein; KEGG: bur:Bcep18194_B3007 amino acid aldolase or racemase-like YP_003097852.1 PFAM: regulatory protein TetR; KEGG: scl:sce5559 HTH-type transcriptional regulator BetI YP_003097853.1 TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1; KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase YP_003097854.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccs:CCNA_02400 transporter, major facilitator superfamily YP_003097855.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: hypothetical protein YP_003097857.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; hypothetical protein; KEGG: hypothetical protein YP_003097858.1 PFAM: aminoglycoside phosphotransferase; KEGG: bcz:BCZK4351 homoserine kinase type II (protein kinase fold) YP_003097860.1 PFAM: copper resistance D domain protein; KEGG: bja:bll4878 copper export protein YP_003097861.1 PFAM: copper resistance protein CopC; KEGG: bra:BRADO4155 copper resistance protein YP_003097862.1 PFAM: nuclear export factor GLE1; KEGG: sme:SMa1200 hypothetical protein YP_003097863.1 KEGG: bxe:Bxe_B0776 membrane glycoprotein YP_003097864.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: ppw:PputW619_2676 choline/carnitine/betaine transporter YP_003097867.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bac:BamMC406_2467 short-chain dehydrogenase/reductase SDR YP_003097869.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bbt:BBta_2852 gamma- glutamyltranspeptidase YP_003097872.1 KEGG: azc:AZC_0951 hypothetical protein YP_003097873.1 KEGG: FAP262; flagellar associated protein YP_003097874.1 PFAM: glycosyl transferase family 2; KEGG: rce:RC1_0824 glycosyl transferase family protein YP_003097875.1 PFAM: glycosyl transferase family 2; methyltransferase type 12; methyltransferase type 11; KEGG: ppf:Pput_3926 glycosyl transferase family protein YP_003097876.1 KEGG: sus:Acid_4178 ribonuclease YP_003097877.1 PFAM: glycosyl transferase group 1; KEGG: xcb:XC_3634 glycosyltransferase YP_003097878.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: swi:Swit_4011 methyltransferase type 12 YP_003097880.1 PFAM: OsmC family protein; KEGG: mlo:mlr4254 osmotically inducible protein C, ATP/GTP binding protein YP_003097882.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: afw:Anae109_0839 ECF subfamily RNA polymerase sigma-24 factor YP_003097884.1 PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: signal transduction histidine kinase, LytS; K07704 two-component system, LytT family, sensor histidine kinase LytS YP_003097886.1 PFAM: peptidase S49; KEGG: rce:RC1_1672 proteinase SohB YP_003097887.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: gur:Gura_2791 LytTR family two component transcriptional regulator YP_003097889.1 PFAM: Na+/solute symporter; KEGG: dac:Daci_5957 SSS family solute/sodium (Na+) symporter YP_003097890.1 PFAM: protein of unknown function DUF485; KEGG: gme:Gmet_3287 hypothetical protein YP_003097891.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bca:BCE_1726 sodium/solute symporter family protein YP_003097892.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: maq:Maqu_3385 DNA binding domain-containing protein YP_003097893.1 KEGG: lpc:LPC_2191 hypothetical protein YP_003097894.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: rfr:Rfer_3913 rhodanese-like protein YP_003097895.1 KEGG: sfu:Sfum_2194 hypothetical protein YP_003097896.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: hypothetical protein YP_003097897.1 PFAM: cytochrome P450; KEGG: jan:Jann_1726 cytochrome P450 YP_003097898.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: gbm:Gbem_3150 glycerophosphoryl diester phosphodiesterase YP_003097899.1 PFAM: SEC-C motif domain protein YP_003097900.1 PFAM: protein of unknown function DUF952; KEGG: rru:Rru_A0513 hypothetical protein YP_003097901.1 KEGG: xau:Xaut_1560 phenylacetaldoxime dehydratase YP_003097902.1 PFAM: Ferritin Dps family protein; KEGG: hypothetical protein YP_003097903.1 catalyzes the degradation of arginine to citruline and ammonia YP_003097904.1 KEGG: bha:BH0832 hypothetical protein YP_003097905.1 PFAM: abortive infection protein; KEGG: dal:Dalk_0566 abortive infection protein YP_003097906.1 KEGG: scl:sce4194 hypothetical protein YP_003097908.1 PFAM: homogentisate 12-dioxygenase; KEGG: bcz:BCZK0217 homogentisate 1,2-dioxygenase YP_003097909.1 KEGG: sus:Acid_6517 hypothetical protein YP_003097910.1 PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF1969; KEGG: jan:Jann_1436 fumarylacetoacetate hydrolase YP_003097911.1 PFAM: regulatory protein IclR; SMART: regulatory protein IclR; KEGG: dac:Daci_0951 IclR family transcriptional regulator YP_003097912.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: bsu:BSU38760 cytochrome bd ubiquinol oxidase (subunit I) YP_003097913.1 KEGG: glo:Glov_1209 cytochrome D ubiquinol oxidase, subunit II; TIGRFAM: cytochrome D ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_003097914.1 SMART: TIR protein; KEGG: vvy:VV1926 hypothetical protein YP_003097915.1 KEGG: bpt:Bpet3362 HlyB/MsbA family ABC transporter; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA YP_003097916.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; GAF domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: pna:Pnap_3765 multi-sensor signal transduction histidine kinase YP_003097917.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xca:xccb100_3213 two-component system regulatory protein YP_003097918.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bca:BCE_4174 acetyltransferase YP_003097919.1 PFAM: Appr-1-p processing domain protein; KEGG: dal:Dalk_0690 Appr-1-p processing domain protein YP_003097920.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: ank:AnaeK_2061 prephenate dehydratase YP_003097921.1 PFAM: phosphoglycerate mutase; KEGG: lch:Lcho_3955 phosphoglycerate mutase YP_003097925.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003097926.1 PFAM: protein of unknown function DUF397 YP_003097927.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: ade:Adeh_1652 peptidylprolyl isomerase YP_003097928.1 PFAM: glycoside hydrolase family 31; carbohydrate binding family 6; Ricin B lectin; SMART: cellulose binding type IV; Ricin B lectin; KEGG: aba:Acid345_1956 glycoside hydrolase, family 31 YP_003097929.1 PFAM: protein of unknown function DUF1025; KEGG: eli:ELI_09390 hypothetical protein YP_003097930.1 KEGG: YALI0F05786p YP_003097931.1 KEGG: hypothetical protein YP_003097932.1 PFAM: glutathionylspermidine synthase; KEGG: sus:Acid_7141 glutathionylspermidine synthase YP_003097933.1 PFAM: protein of unknown function DUF350; KEGG: met:M446_5403 hypothetical protein YP_003097935.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003097936.1 PFAM: FAD dependent oxidoreductase; HI0933 family protein; KEGG: sus:Acid_5855 FAD dependent oxidoreductase YP_003097937.1 PFAM: luciferase-like monooxygenase; KEGG: rpb:RPB_4411 luciferase-like YP_003097938.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: mno:Mnod_7133 Cof-like hydrolase YP_003097939.1 KEGG: sml:Smlt0624 transmembrane protein YP_003097940.1 PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_6128 glycosyl transferase, family 2 YP_003097941.1 PFAM: GtrA family protein; KEGG: GtrA family protein YP_003097942.1 PFAM: acyltransferase 3; KEGG: acr:Acry_1134 acyltransferase 3 YP_003097943.1 PFAM: glycosyl transferase group 1; KEGG: pae:PA1391 glycosyl transferase YP_003097944.1 PFAM: glycosyl transferase family 2; KEGG: bcj:BCAL3234 glycosyltransferase YP_003097945.1 KEGG: gox:GOX1488 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like YP_003097946.1 KEGG: pna:Pnap_3593 hypothetical protein YP_003097947.1 KEGG: dac:Daci_5514 hypothetical protein YP_003097948.1 KEGG: jan:Jann_1080 metallophosphoesterase YP_003097949.1 PFAM: glycosyl transferase family 2; KEGG: apl:APL_1469 glycosyl transferase family protein YP_003097950.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cbc:CbuK_1550 polysaccharide export ATP- binding protein YP_003097951.1 PFAM: ABC transporter; KEGG: tbd:Tbd_1878 ABC transporter permease protein YP_003097953.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: mlo:mlr0102 aminotransferase YP_003097954.1 KEGG: mes:Meso_0486 hypothetical protein YP_003097955.1 KEGG: scl:sce7164 hypothetical protein YP_003097956.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: hypothetical protein YP_003097957.1 PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_C_5049 hypothetical protein YP_003097958.1 PFAM: peptidase M28; protease-associated PA domain protein; KEGG: pag:PLES_21241 aminopeptidase YP_003097959.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: rfr:Rfer_2725 protein of unknown function, zinc metallopeptidase YP_003097960.1 PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: scl:sce7039 5'-nucleotidase family protein YP_003097961.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: acp:A2cp1_4259 transcriptional regulator, MarR family YP_003097962.1 PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_1521 protein of unknown function DUF81 YP_003097963.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: scl:sce8915 histidinol-phosphate transaminase YP_003097964.1 PFAM: dienelactone hydrolase; KEGG: cvi:CV_3204 carboxymethylenebutenolidase YP_003097965.1 KEGG: GK21229 gene product from transcript GK21229- RA YP_003097966.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003097967.1 KEGG: reu:Reut_B5390 glycin-rich signal peptide protein YP_003097969.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: sil:SPO1959 acetoacetyl-CoA synthetase YP_003097970.1 KEGG: SAMD1; sterile alpha motif domain containing 1 YP_003097971.1 PFAM: beta-lactamase; KEGG: sml:Smlt3132 beta-lactamase YP_003097972.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: bur:Bcep18194_A5663 DNA translocase FtsK YP_003097973.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: hha:Hhal_0769 UDP-glucose 4-epimerase YP_003097976.1 KEGG: scl:sce4085 hypothetical protein YP_003097977.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: nmc:NMC1992 modification methylase (cytosine- specific DNA methylase) YP_003097978.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: ADR019Cp; K01066 esterase / lipase YP_003097980.1 PFAM: protein of unknown function DUF1089; KEGG: sme:SMc03980 hypothetical protein YP_003097981.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: gbm:Gbem_1434 acetyl-CoA acetyltransferase YP_003097982.1 KEGG: CG32656 YP_003097984.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_003097985.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate YP_003097986.1 KEGG: sal:Sala_2314 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerization domain protein YP_003097988.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: gur:Gura_0055 CMP/dCMP deaminase, zinc- binding YP_003097989.1 PFAM: integrase family protein; KEGG: sus:Acid_5994 phage integrase family protein YP_003097990.1 TIGRFAM: DNA binding domain protein, excisionase family YP_003097991.1 KEGG: rso:RSc2483 hypothetical protein YP_003097994.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bac:BamMC406_0006 cell divisionFtsK/SpoIIIE YP_003097995.1 KEGG: bmv:BMASAVP1_A1237 hypothetical protein YP_003097999.1 SMART: helix-turn-helix domain protein YP_003098000.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003098001.1 PFAM: aminotransferase class IV; KEGG: smt:Smal_1152 hypothetical protein YP_003098002.1 PFAM: protein of unknown function DUF323; SMART: helix-turn-helix domain protein; KEGG: scl:sce5487 protein kinase YP_003098004.1 KEGG: rsq:Rsph17025_0912 hypothetical protein YP_003098005.1 KEGG: bxe:Bxe_C1257 hypothetical protein YP_003098006.1 PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: bcr:BCAH187_E0055 peptidase C14 caspase catalytic subunit P20 YP_003098007.1 PFAM: Domain of unknown function DUF1863; KEGG: sbm:Shew185_4383 hypothetical protein YP_003098008.1 PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase; methyltransferase type 11; KEGG: bmj:BMULJ_02352 protein-L-isoaspartate (D- aspartate) O-methyltransferase YP_003098009.1 KEGG: scl:sce7176 hypothetical protein YP_003098011.1 PFAM: helix-turn-helix domain protein; hypothetical protein; SMART: helix-turn-helix domain protein; KEGG: eca:ECA3401 phage regulatory protein YP_003098012.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: scl:sce0688 endonuclease/exonuclease/phosphatase family protein YP_003098013.1 PFAM: endoribonuclease L-PSP; KEGG: scl:sce5646 hypothetical protein YP_003098014.1 KEGG: mlo:mlr3102 transcriptional regulator YP_003098015.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: pca:Pcar_1336 methyl-accepting chemotaxis protein (MCP) YP_003098016.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003098017.1 PFAM: periplasmic binding protein; KEGG: atc:AGR_pAT_447 DtxR/iron regulated lipoprotein precursor YP_003098018.1 KEGG: gbm:Gbem_0212 DNA polymerase III subunits gamma/tau; TIGRFAM: DNA polymerase III subunits gamma/tau; PFAM: ATPase AAA; SMART: ATPase AAA YP_003098019.1 PFAM: conserved hypothetical protein; KEGG: gme:Gmet_3421 hypothetical protein YP_003098020.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_003098021.1 KEGG: bcz:BCZK2509 hypothetical protein YP_003098022.1 PFAM: transcriptional activator domain; TPR repeat- containing protein; hypothetical protein; NB-ARC domain protein; transcriptional regulator domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003098023.1 PFAM: extracellular solute-binding protein family 5; KEGG: hap:HAPS_0936 periplasmic dipeptide transport protein DppA YP_003098024.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_1670 binding-protein-dependent transport systems inner membrane component YP_003098025.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH3642 dipeptide ABC transporter (permease) YP_003098026.1 KEGG: bja:bll2870 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098027.1 KEGG: bja:blr1357 peptide ABC transporter ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098028.1 PFAM: N-6 DNA methylase; KEGG: xom:XOO_3262 type I restriction system adenine methylase YP_003098029.1 KEGG: pol:Bpro_3150 DedA YP_003098030.1 KEGG: csa:Csal_2535 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain YP_003098032.1 PFAM: nitroreductase; KEGG: ank:AnaeK_1659 nitroreductase YP_003098033.1 KEGG: mxa:MXAN_5370 lipoprotein YP_003098034.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation. YP_003098035.1 KEGG: bcb:BCB4264_A3899 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerization region; Semialdehyde dehydrogenase NAD - binding YP_003098036.1 PFAM: carbohydrate kinase FGGY; KEGG: bcb:BCB4264_A2253 gluconate kinase YP_003098037.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: vsa:VSAL_II0614 cold shock-like protein YP_003098038.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_3286 major facilitator transporter YP_003098039.1 PFAM: Catalase domain protein; KEGG: eta:ETA_17240 catalase YP_003098040.1 PFAM: OsmC family protein; KEGG: bpy:Bphyt_6798 OsmC family protein YP_003098041.1 PFAM: Ferritin Dps family protein; KEGG: mpo:Mpop_0322 ferritin Dps family protein YP_003098042.1 PFAM: NADPH-dependent FMN reductase; KEGG: bpl:BURPS1106A_A1934 NADPH-dependent FMN reductase YP_003098043.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: rce:RC1_2418 lipase YP_003098044.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: pzu:PHZ_c2763 dipeptidyl aminopeptidase/acylaminoacyl-peptidase YP_003098045.1 PFAM: methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; methyltransferase type 12; KEGG: hha:Hhal_0984 methyltransferase type 11 YP_003098046.1 SYNPO2L; KEGG: SYNPO2L; synaptopodin 2-like YP_003098048.1 PFAM: metallophosphoesterase; KEGG: hch:HCH_04892 phosphohydrolase YP_003098049.1 KEGG: mxa:MXAN_5202 GatB/YqeY domain protein YP_003098050.1 PFAM: glycosyl transferase family 51; PASTA domain containing protein; penicillin-binding protein transpeptidase; SMART: PASTA domain containing protein; KEGG: azc:AZC_0337 penicillin-binding protein 1A YP_003098051.1 PFAM: transcription factor WhiB YP_003098052.1 PFAM: anion-transporting ATPase; KEGG: acp:A2cp1_0984 adventurous gliding motility protein R YP_003098053.1 PFAM: anion-transporting ATPase; KEGG: afw:Anae109_0972 chromosome partitioning-like ATPase YP_003098056.1 PFAM: endoribonuclease L-PSP; KEGG: rce:RC1_1921 endoribonuclease L-PSP YP_003098058.1 KEGG: predicted protein YP_003098059.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003098060.1 PFAM: oxidoreductase domain protein; KEGG: rec:RHECIAT_PC0000780 oxidoreductase protein YP_003098062.1 PFAM: NUDIX hydrolase; KEGG: rpd:RPD_3111 NUDIX hydrolase YP_003098063.1 PFAM: beta-lactamase domain protein; KEGG: aav:Aave_0793 beta-lactamase domain protein YP_003098064.1 KEGG: mlo:mlr3017 5'-nucleotidase YP_003098066.1 KEGG: sus:Acid_0002 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003098067.1 PFAM: major facilitator superfamily MFS_1; KEGG: sml:Smlt0548 MFS family transporter YP_003098068.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bbt:BBta_5745 transcriptional regulator YP_003098070.1 KEGG: pca:Pcar_0009 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003098071.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: xop:PXO_04554 thioredoxin YP_003098072.1 PFAM: NUDIX hydrolase; KEGG: mch:Mchl_1739 NUDIX hydrolase YP_003098073.1 PFAM: Colicin V production protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: hypothetical protein YP_003098074.1 PFAM: alpha/beta hydrolase fold; KEGG: acp:A2cp1_0551 alpha/beta hydrolase fold protein YP_003098075.1 PFAM: protein of unknown function DUF1469; KEGG: mpo:Mpop_1689 protein of unknown function DUF1469 YP_003098076.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; KEGG: mlo:mlr5309 Na+/H+ antiporter YP_003098077.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_003098078.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_3953 GCN5-related N- acetyltransferase YP_003098079.1 KEGG: mxa:MXAN_6904 hypothetical protein YP_003098080.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: pde:Pden_2620 kynureninase YP_003098081.1 PFAM: tryptophan 23-dioxygenase; KEGG: reh:H16_B1418 tryptophan 2,3-dioxygenase YP_003098082.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bam:Bamb_3888 AsnC family transcriptional regulator YP_003098083.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway YP_003098084.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: reh:H16_B1066 transcriptional regulator YP_003098085.1 PFAM: beta-lactamase; KEGG: beta-lactamase YP_003098086.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein YP_003098087.1 KEGG: similar to mucin 17 YP_003098088.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH0675 beta-hexosamidase A precursor YP_003098089.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); KEGG: pap:PSPA7_0428 hypothetical protein YP_003098090.1 KEGG: ank:AnaeK_2914 Flp pilus assembly protein ATPase CpaE-like protein YP_003098091.1 PFAM: type II secretion system protein E; KEGG: bav:BAV2285 pilus assembly protein YP_003098092.1 PFAM: type II secretion system protein; KEGG: acp:A2cp1_3010 type II secretion system protein YP_003098093.1 PFAM: type II secretion system protein; KEGG: Hcn2; hyperpolarization activated cyclic nucleotide-gated potassium channel 2; K04955 hyperpolarization activated cyclic nucleotide-gated potassium channel 2 YP_003098096.1 KEGG: nwi:Nwi_2535 hypothetical protein YP_003098097.1 PFAM: Bifunctional DNA primase/polymerase YP_003098098.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: dvu:DVU0256 DEAD-box ATP dependent DNA helicase YP_003098099.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_003098100.1 KEGG: hypothetical protein YP_003098102.1 KEGG: bac:BamMC406_1732 peptidase M23 YP_003098103.1 KEGG: YALI0D24365p YP_003098104.1 KEGG: mucin-associated surface protein (MASP) YP_003098105.1 KEGG: swi:Swit_0780 branched-chain alpha-keto acid dehydrogenase E2 component YP_003098106.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_003098107.1 KEGG: hypothetical protein YP_003098108.1 PFAM: major facilitator superfamily MFS_1; thymidylate kinase; KEGG: eli:ELI_06215 thymidylate kinase YP_003098109.1 KEGG: dal:Dalk_0024 DNA-directed DNA polymerase YP_003098110.1 PFAM: glycosyl transferase family 2; KEGG: dal:Dalk_4823 glycosyl transferase family 2 YP_003098111.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome YP_003098112.1 PFAM: periplasmic binding protein; KEGG: bcb:BCB4264_A4636 iron compound ABC transporter, iron compound-binding protein YP_003098113.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ent:Ent638_1120 iron-enterobactin transporter ATP-binding protein YP_003098115.1 PFAM: luciferase-like monooxygenase; KEGG: swi:Swit_1615 coenzyme F420-dependent N5 N10- methylene tetrahydromethanopterin reductase-like protein YP_003098116.1 PFAM: Excalibur domain protein; KEGG: GE20613 gene product from transcript GE20613- RA YP_003098117.1 PFAM: Excalibur domain protein; KEGG: sal:Sala_0134 excalibur YP_003098118.1 PFAM: nuclease (SNase domain protein); SMART: nuclease (SNase domain protein); KEGG: mno:Mnod_4939 hypothetical protein YP_003098119.1 KEGG: pzu:PHZ_c1913 hypothetical protein YP_003098120.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: atc:AGR_C_1531 hypothetical protein YP_003098121.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: ppg:PputGB1_3285 EmrB/QacA family drug resistance transporter YP_003098122.1 PFAM: inorganic pyrophosphatase; KEGG: gdi:GDI3491 inorganic pyrophosphatase YP_003098123.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D- alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: bpm:BURPS1710b_1102 lipoprotein YP_003098125.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: ade:Adeh_1494 tRNA(Ile)-lysidine synthetase- like YP_003098126.1 KEGG: spe:Spro_3998 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003098127.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dac:Daci_0766 von Willebrand factor type A YP_003098128.1 KEGG: bcy:Bcer98_0060 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; SMART: ATPase AAA YP_003098129.1 KEGG: bha:BH1646 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I YP_003098130.1 KEGG: afw:Anae109_2337 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003098131.1 TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: oca:OCAR_6643 dihydroneopterin aldolase YP_003098132.1 KEGG: mex:Mext_1812 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003098133.1 KEGG: afw:Anae109_2860 cytochrome C oxidase subunit III YP_003098134.1 KEGG: mgm:Mmc1_2162 hypothetical protein YP_003098135.1 PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: bcz:BCZK4997 NADH dehydrogenase subunit D YP_003098136.1 PFAM: protein of unknown function DUF1203; KEGG: rle:RL1972 hypothetical protein YP_003098137.1 PFAM: protein of unknown function DUF185; KEGG: lch:Lcho_0104 hypothetical protein YP_003098138.1 KEGG: scl:sce5075 hypothetical protein YP_003098139.1 KEGG: sat:SYN_02774 cytoplasmic protein YP_003098140.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_003098141.1 KEGG: bcb:BCB4264_A1597 aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003098142.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: ank:AnaeK_1477 transcriptional acitvator, Baf family YP_003098143.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: mno:Mnod_8065 methyltransferase type 11 YP_003098144.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dal:Dalk_1784 lysyl-tRNA synthetase YP_003098146.1 PFAM: transport system permease protein; KEGG: pde:Pden_3523 transport system permease protein YP_003098147.1 PFAM: transport system permease protein; KEGG: ppg:PputGB1_1806 transport system permease protein YP_003098148.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cvi:CV_2234 enterobactin-iron transport system ATP-binding protein YP_003098149.1 KEGG: hypothetical protein YP_003098150.1 PFAM: ATPase AAA; ATPase AAA; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA; KEGG: bha:BH0103 class III stress response-related ATPase YP_003098151.1 KEGG: saz:Sama_0018 pyroglutamyl-peptidase I; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_003098152.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: afw:Anae109_1227 endonuclease/exonuclease/phosphatase YP_003098153.1 PFAM: Silent information regulator protein Sir2; KEGG: afw:Anae109_4302 silent information regulator protein Sir2 YP_003098154.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: afr:AFE_2662 antibiotic biosynthesis monooxygenase family protein YP_003098155.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: mxa:MXAN_0644 peptidase, M1 (aminopeptidase N) family YP_003098156.1 PFAM: alpha/beta hydrolase fold; KEGG: ppg:PputGB1_4047 alpha/beta hydrolase fold YP_003098158.1 PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: scl:sce3935 A/G-specific adenine glycosylase YP_003098159.1 PFAM: carbonic anhydrase; KEGG: aba:Acid345_1601 carbonic anhydrase YP_003098160.1 KEGG: hypothetical protein; K05747 Wiskott-Aldrich syndrome protein YP_003098161.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gox:GOX0577 transcriptional regulator YP_003098162.1 KEGG: pen:PSEEN1955 ribose operon repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003098163.1 PFAM: extracellular solute-binding protein family 1; KEGG: oan:Oant_3895 extracellular solute-binding protein family 1 YP_003098164.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ade:Adeh_4135 ABC sugar transporter, inner membrane subunit YP_003098165.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acp:A2cp1_4287 binding-protein-dependent transport systems inner membrane component YP_003098166.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: rlt:Rleg2_5484 ABC transporter YP_003098167.1 PFAM: periplasmic solute binding protein; KEGG: bpy:Bphyt_0292 periplasmic solute binding protein YP_003098168.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bvi:Bcep1808_2715 ABC transporter YP_003098169.1 PFAM: ABC transporter; KEGG: bxe:Bxe_A0715 ABC Mn2+/Zn2+ transporter, inner membrane subunit YP_003098170.1 KEGG: cvi:CV_3252 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003098171.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B2569 MFS transporter YP_003098173.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: ppw:PputW619_0881 membrane bound O-acyl transferase MBOAT family protein YP_003098174.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: afw:Anae109_2230 RNA methyltransferase YP_003098175.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_003098176.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: haloacid dehalogenase-like hydrolase family protein YP_003098177.1 KEGG: eli:ELI_06290 bifunctional 2-C-methyl-D- erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D- erythritol 2,4-cyclodiphosphate synthase protein; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003098178.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bcr:BCAH187_A0116 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase YP_003098179.1 PFAM: transcription factor CarD; KEGG: bcb:BCB4264_A4827 transcriptional regulator, CarD family YP_003098180.1 KEGG: YALI0C03894p YP_003098181.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_003098182.1 SMART: helix-turn-helix domain protein; KEGG: bur:Bcep18194_B2467 XRE family transcriptional regulator YP_003098183.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1910 short chain dehydrogenase YP_003098184.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: glycoside hydrolase 15-related; trehalose- phosphatase; KEGG: nmu:Nmul_A2309 glycoside hydrolase 15-like protein YP_003098185.1 PFAM: glycosyl transferase family 20; KEGG: scl:sce0488 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_003098186.1 PFAM: protein of unknown function DUF1212; KEGG: rpt:Rpal_1546 protein of unknown function DUF1212 YP_003098187.1 SMART: regulatory protein ArsR; KEGG: ajs:Ajs_2855 ArsR family transcriptional regulator YP_003098188.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003098189.1 PFAM: chemotaxis sensory transducer; GAF domain protein; SMART: chemotaxis sensory transducer; GAF domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003098190.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mxa:MXAN_6334 hypothetical protein YP_003098191.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase YP_003098192.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bat:BAS2056 DNA-binding response regulator YP_003098193.1 PFAM: Ferric reductase domain protein transmembrane component domain; oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding domain protein; FAD-binding 8 domain protein; KEGG: ank:AnaeK_0310 oxidoreductase FAD/NAD(P)- binding domain protein YP_003098194.1 PFAM: FMN-binding domain protein; KEGG: mlo:mll6621 hypothetical protein YP_003098195.1 PFAM: ApbE family lipoprotein; KEGG: mlo:mll6620 thiamine biosynthesis lipoprotein YP_003098197.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: dol:Dole_0265 ADP-ribosylation/crystallin J1 YP_003098198.1 PFAM: transcriptional activator domain; NB-ARC domain protein; transcriptional regulator domain protein; KEGG: scl:sce8759 hypothetical protein YP_003098199.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bcb:BCB4264_A2458 hypothetical protein YP_003098202.1 PFAM: luciferase-like monooxygenase; KEGG: sme:SM_b21003 oxidoreductase protein YP_003098203.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: acr:Acry_2830 LysR family transcriptional regulator YP_003098204.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: slo:Shew_1116 ATPase, BadF/BadG/BcrA/BcrD type YP_003098205.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: glo:Glov_1721 peptidase S8 and S53 subtilisin kexin sedolisin YP_003098206.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rle:RL0016 FAA hydrolase family protein YP_003098207.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: xca:xccb100_4271 phosphopyruvate hydratase YP_003098208.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bpe:BP1923 short chain dehydrogenase YP_003098209.1 PFAM: aldo/keto reductase; KEGG: xac:XAC4184 oxidoreductase YP_003098210.1 PFAM: amidohydrolase 2; KEGG: mes:Meso_1610 amidohydrolase 2 YP_003098211.1 PFAM: beta-lactamase; KEGG: bcz:pE33L466_0099 D-stereospecific peptide hydrolase YP_003098212.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: csa:Csal_0365 transcriptional regulator, GntR family YP_003098213.1 PFAM: sugar isomerase (SIS); KEGG: sus:Acid_1598 glutamine--fructose-6-phosphate transaminase (isomerizing) YP_003098214.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: jan:Jann_3555 binding-protein-dependent transport systems inner membrane component YP_003098215.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B0419 ABC sugar transporter, inner membrane subunit YP_003098216.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll4149 sugar ABC transporter, (sugar- binding protein) YP_003098217.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcy:Bcer98_2752 GntR family transcriptional regulator YP_003098218.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aba:Acid345_2084 pyridoxal-5'-phosphate- dependent enzyme, beta subunit YP_003098219.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: scl:sce0163 hypothetical protein YP_003098220.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate YP_003098221.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: azc:AZC_3554 glycine oxidase precursor YP_003098222.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mms:mma_0316 thiamine biosynthesis protein ThiS YP_003098223.1 PFAM: thiazole biosynthesis family protein; KEGG: rce:RC1_3100 thiazole biosynthesis protein ThiG YP_003098224.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcm:Bcenmc03_5734 MarR family transcriptional regulator YP_003098225.1 PFAM: O-methyltransferase; KEGG: mlo:mll3178 hypothetical protein YP_003098226.1 PFAM: protein of unknown function DUF397 YP_003098227.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003098228.1 KEGG: hypothetical protein YP_003098231.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bph:Bphy_4607 short-chain dehydrogenase/reductase SDR YP_003098232.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B1146 TetR family transcriptional regulator YP_003098233.1 KEGG: rec:RHECIAT_CH0002869 hydrolase protein YP_003098234.1 PFAM: regulatory protein TetR; KEGG: smd:Smed_4442 transcriptional regulator, TetR family YP_003098235.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: cak:Caul_0434 alcohol dehydrogenase YP_003098236.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_0435 TetR family transcriptional regulator YP_003098237.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase YP_003098238.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_003098240.1 KEGG: pmr:PMI2825 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003098242.1 KEGG: hypothetical protein YP_003098243.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mes:Meso_0568 transcriptional regulator, GntR family YP_003098244.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: gme:Gmet_2577 NADH:flavin oxidoreductase/NADH oxidase YP_003098245.1 KEGG: mrd:Mrad2831_5798 AAA family ATPase, CDC48 subfamily protein; PFAM: ATPase AAA; SMART: ATPase AAA YP_003098246.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: scl:sce7901 ECF family RNA polymerase sigma factor YP_003098247.1 KEGG: mxa:MXAN_3349 DnaJ domain protein YP_003098248.1 KEGG: mag:amb0603 phosphatidylserine synthase; TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_003098249.1 KEGG: rce:RC1_1432 phosphatidylserine decarboxylase- like protein, TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_003098250.1 PFAM: peptidase M48 Ste24p; KEGG: sfu:Sfum_1032 peptidase M48, Ste24p YP_003098251.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: afw:Anae109_1445 molybdenum cofactor synthesis domain-containing protein YP_003098252.1 PFAM: protein of unknown function DUF124; KEGG: hypothetical protein YP_003098253.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ank:AnaeK_2630 cold-shock DNA-binding domain protein YP_003098254.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ade:Adeh_1074 serine/threonine protein kinase YP_003098255.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bcb:BCB4264_A0298 chaperonin GroL YP_003098257.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: sus:Acid_3132 ECF subfamily RNA polymerase sigma-24 factor YP_003098258.1 PFAM: CutC family protein; KEGG: bcj:BCAL0655 CutC family protein YP_003098259.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100263 substrate-binding component of ABC transporter YP_003098260.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mxa:MXAN_7294 sugar ABC transporter, permease protein YP_003098261.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_3667 binding-protein-dependent transport systems inner membrane component YP_003098262.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: nar:Saro_2417 beta-N-acetylhexosaminidase YP_003098263.1 PFAM: PspC domain protein; KEGG: cbc:CbuK_0644 stress-responsive transcriptional regulator YP_003098264.1 PFAM: protein of unknown function DUF182; KEGG: msl:Msil_0236 protein of unknown function DUF182 YP_003098265.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate YP_003098266.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: SSL2; DNA helicase; K10843 DNA excision repair protein ERCC-3 YP_003098269.1 KEGG: Prp2; proline rich protein 2 YP_003098270.1 KEGG: twin-arginine translocation pathway signal; K02051 sulfonate/nitrate/taurine transport system substrate-binding protein YP_003098271.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; nitrate and nitrite sensing domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mag:amb3383 methyl-accepting chemotaxis protein YP_003098272.1 PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein YP_003098273.1 PFAM: protein of unknown function DUF742 YP_003098274.1 PFAM: protein of unknown function ATP binding; KEGG: nmn:NMCC_1665 hypothetical protein YP_003098275.1 KEGG: dac:Daci_2082 hypothetical protein YP_003098276.1 KEGG: acp:A2cp1_2891 response regulator receiver YP_003098278.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sat:SYN_00517 NAD-dependent malic enzyme YP_003098279.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: eli:ELI_06520 molybdopterin cofactor biosynthesis MoaC region YP_003098280.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sfu:Sfum_0070 molybdenum cofactor synthesis domain YP_003098281.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: scl:sce2941 molybdopterin-converting factor chain 2 YP_003098282.1 PFAM: transglycosylase domain protein; SMART: peptidoglycan-binding LysM; KEGG: vei:Veis_4083 peptidoglycan-binding LysM YP_003098283.1 PFAM: thiamineS protein; KEGG: ade:Adeh_1120 molybdopterin synthase subunit MoaE / molybdopterin synthase subunit MoaD YP_003098284.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z YP_003098285.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bja:bll4976 transcriptional regulatory protein YP_003098286.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: csa:Csal_0794 HAD-superfamily hydrolase, subfamily IIA YP_003098287.1 PFAM: protein of unknown function DUF1503; KEGG: scl:sce8705 hypothetical protein YP_003098288.1 PFAM: metallophosphoesterase; KEGG: serine/threonine protein phosphatase YP_003098289.1 PFAM: protein of unknown function DUF307; KEGG: rpa:RPA0774 hypothetical protein YP_003098290.1 PFAM: oxidoreductase domain protein; homoserine dehydrogenase NAD-binding; oxidoreductase domain; KEGG: similar to dimeric dihydrodiol dehydrogenase YP_003098291.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_0237 OmpA family protein YP_003098292.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_2037 HAD family hydrolase YP_003098294.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bcy:Bcer98_3497 cold-shock DNA-binding domain- containing protein YP_003098296.1 PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_4876 major facilitator transporter YP_003098297.1 PFAM: glutamine cyclotransferase; KEGG: sus:Acid_3566 glutamine cyclotransferase YP_003098298.1 KEGG: GL17023 gene product from transcript GL17023- RA YP_003098299.1 KEGG: nha:Nham_3709 hypothetical protein YP_003098301.1 PFAM: xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: acp:A2cp1_3490 xanthine/uracil/vitamin C permease YP_003098302.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bvi:Bcep1808_5100 MarR family transcriptional regulator YP_003098303.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: bpy:Bphyt_5813 major facilitator superfamily MFS_1 YP_003098304.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: gdi:GDI0684 major facilitator transporter YP_003098305.1 PFAM: manganese and iron superoxide dismutase; KEGG: hypothetical protein YP_003098306.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6528 ABC transporter, ATP-binding protein YP_003098308.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: scl:sce0051 hypothetical protein YP_003098309.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mes:Meso_2208 tRNA/rRNA methyltransferase (SpoU) YP_003098310.1 KEGG: hypothetical protein YP_003098311.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; phospholipase/carboxylesterase; KEGG: hypothetical protein YP_003098312.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: lpp:lpp1608 hypothetical protein YP_003098313.1 PFAM: polysaccharide lyase family 8; polysaccharide lyase 8 alpha-helical; KEGG: vvy:VVA1636 hypothetical protein YP_003098314.1 KEGG: rpi:Rpic_0717 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003098315.1 KEGG: scl:sce6547 urease accessory protein UreD YP_003098317.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: scl:sce6551 urease accessory protein G YP_003098318.1 KEGG: ank:AnaeK_0974 hypothetical protein YP_003098319.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_003098320.1 KEGG: atu:Atu2405 urease subunit beta; TIGRFAM: urease subunit beta; PFAM: Urease beta subunit YP_003098321.1 KEGG: oan:Oant_0332 urease subunit gamma; TIGRFAM: urease subunit gamma; PFAM: Urease gamma subunit region YP_003098322.1 forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle YP_003098323.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sus:Acid_0079 ABC transporter YP_003098324.1 PFAM: ABC transporter; KEGG: mxa:MXAN_1598 ABC transporter, permease protein, ABC-2 family YP_003098325.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sus:Acid_1273 integral membrane sensor signal transduction histidine kinase YP_003098326.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sus:Acid_2683 two component LuxR family transcriptional regulator YP_003098327.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_003098330.1 KEGG: similar to hedgehog protein YP_003098332.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: rce:RC1_1837 ABC transporter, ATP-binding YP_003098333.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bha:BH1126 ABC transporter ATP-binding protein YP_003098334.1 PFAM: regulatory protein TetR; KEGG: gdj:Gdia_1592 regulatory protein TetR YP_003098335.1 PFAM: amino acid permease-associated region; KEGG: bpt:Bpet1644 amino acid transporter YP_003098336.1 PFAM: Aldose 1-epimerase; KEGG: sfv:SFV_3620 aldose-1-epimerase YP_003098337.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bha:BH3008 hypothetical protein YP_003098338.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bat:BAS5190 acyl-CoA dehydrogenase YP_003098339.1 PFAM: regulatory protein TetR; KEGG: rme:Rmet_3794 transcriptional regulator, TetR family YP_003098340.1 PFAM: PfkB domain protein; KEGG: sit:TM1040_3042 PfkB YP_003098341.1 KEGG: scl:sce8281 hypothetical protein; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_003098342.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: cvi:CV_3481 deoxyribodipyrimidine photo-lyase YP_003098343.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family YP_003098344.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: mmr:Mmar10_2544 signal transduction histidine kinase YP_003098345.1 KEGG: scl:sce9075 hypothetical protein YP_003098346.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH1166 ABC transporter ATP-binding protein YP_003098347.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gdi:GDI1973 HTH-type transcriptional regulator YP_003098348.1 PFAM: conserved hypothetical protein; KEGG: lpn:lpg2755 hypothetical protein YP_003098350.1 KEGG: predicted gene, 100041170 YP_003098351.1 PFAM: Amidohydrolase 3; KEGG: bac:BamMC406_5450 N-isopropylammelide isopropylaminohydrolase YP_003098352.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: pzu:PHZ_c1983 alcohol dehydrogenase, zinc- containing YP_003098353.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_A4874 GCN5-related N- acetyltransferase YP_003098354.1 KEGG: tgr:Tgr7_2517 hypothetical protein YP_003098355.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bpt:Bpet4245 hypothetical protein YP_003098358.1 KEGG: hypothetical protein YP_003098360.1 PFAM: alpha/beta hydrolase fold; KEGG: spe:Spro_0615 alpha/beta hydrolase fold YP_003098361.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dvm:DvMF_0511 transcriptional regulator, LysR family YP_003098362.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: phenazine biosynthesis PhzC/PhzF protein; KEGG: aha:AHA_2368 phenazine biosynthesis protein PhzF YP_003098363.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_5299 LysR family transcriptional regulator YP_003098364.1 PFAM: NmrA family protein; short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_5100 NmrA family protein YP_003098365.1 PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_5099 transcriptional regulator YP_003098366.1 PFAM: AIG2 family protein; KEGG: pae:PA4164 hypothetical protein YP_003098367.1 KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20 YP_003098368.1 KEGG: hha:Hhal_1735 ABC transporter YP_003098369.1 PFAM: GTP-binding protein HSR1-related; KEGG: scl:sce0387 hypothetical protein YP_003098370.1 KEGG: bcj:BCAS0321a hypothetical protein YP_003098371.1 KEGG: hha:Hhal_0145 heat shock protein 70 YP_003098372.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein YP_003098373.1 KEGG: hch:HCH_05440 small integral membrane protein YP_003098374.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce4551 protein kinase YP_003098375.1 KEGG: similar to zinc finger protein 607 YP_003098376.1 PFAM: AlkA domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6205 regulatory protein Ada YP_003098378.1 PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein YP_003098380.1 PFAM: protein of unknown function DUF397 YP_003098382.1 KEGG: hypothetical LOC586091 YP_003098383.1 TIGRFAM: hypothetical protein; LPXTG- motif cell wall anchor domain protein; PFAM: Cna B domain protein; Pericardin like; KEGG: gme:Gmet_2043 hypothetical protein YP_003098384.1 TIGRFAM: YD repeat protein; KEGG: rso:RS05482 rhs-related transmembrane protein YP_003098387.1 PFAM: NUDIX hydrolase; KEGG: bbt:BBta_3942 NUDIX-like hydrolase YP_003098388.1 PFAM: transcriptional activator domain; hypothetical protein; hypothetical protein; NB- ARC domain protein; transcriptional regulator domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003098389.1 KEGG: xcv:XCV0585 hypothetical protein YP_003098392.1 KEGG: hypothetical protein YP_003098393.1 KEGG: pca:Pcar_0786 hypothetical protein YP_003098394.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003098396.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003098398.1 KEGG: ppr:PBPRA2228 carboxynorspermidine decarboxylase YP_003098400.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: swi:Swit_5329 phosphoadenosine phosphosulfate reductase YP_003098401.1 KEGG: swi:Swit_5328 hypothetical protein YP_003098402.1 KEGG: swi:Swit_5327 hypothetical protein YP_003098403.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afw:Anae109_1098 aminotransferase class V YP_003098404.1 PFAM: type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: nha:Nham_3708 helicase-like YP_003098405.1 KEGG: rpe:RPE_2170 hypothetical protein YP_003098406.1 KEGG: bbr:BB2173 bifunctional riboflavin kinase/FMN adenylyltransferase YP_003098407.1 PFAM: integrase family protein; KEGG: cjd:JJD26997_0344 phage integrase YP_003098409.1 PFAM: peptidase S45 penicillin amidase; KEGG: abc:ACICU_01963 protein related to penicillin acylase YP_003098410.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003098411.1 KEGG: mgm:Mmc1_3430 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003098412.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase; KEGG: ajs:Ajs_3177 cob(II)yrinic acid a,c-diamide reductase YP_003098413.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: bha:BH4048 30S ribosomal protein S18 YP_003098414.1 PFAM: ribosomal protein S14; KEGG: ilo:IL1903 ribosomal protein S14 YP_003098415.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: bpe:BP2050 50S ribosomal protein L33 YP_003098416.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: tcx:Tcr_1918 ribosomal protein L28 YP_003098417.1 PFAM: phosphoglycerate mutase; KEGG: phosphoglycerate/bisphosphoglycerate mutase family protein YP_003098418.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: bha:BH0200 hypothetical protein YP_003098419.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: scl:sce7905 hypothetical protein YP_003098420.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_5851 acetyltransferase, GNAT family YP_003098421.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family YP_003098422.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase YP_003098423.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_2010 binding-protein-dependent transport systems inner membrane component YP_003098424.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120384 permease component of ABC transporter YP_003098425.1 PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter YP_003098426.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase YP_003098427.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: glpRb; glycerol-3-phosphate transcriptional regulator protein YP_003098428.1 KEGG: nmu:Nmul_A1939 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003098429.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: gox:GOX0798 serine protease YP_003098431.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sfu:Sfum_0070 molybdenum cofactor synthesis domain YP_003098433.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: spe:Spro_4515 large-conductance mechanosensitive channel YP_003098434.1 PFAM: SAF domain protein; KEGG: dvm:DvMF_2742 Flp pilus assembly protein CpaB YP_003098435.1 TIGRFAM: regulatory protein, FmdB family; KEGG: scl:sce1745 hypothetical protein YP_003098436.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: ade:Adeh_1046 5-formyltetrahydrofolate cyclo- ligase YP_003098437.1 PFAM: Nucleotidyl transferase; KEGG: mag:amb4451 UDP-glucose pyrophosphorylase YP_003098438.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: hha:Hhal_0242 molybdenum cofactor synthesis domain YP_003098439.1 PFAM: GCN5-related N-acetyltransferase; KEGG: smd:Smed_0534 GCN5-related N- acetyltransferase YP_003098441.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: nwi:Nwi_3032 Crp family transcriptional regulator YP_003098443.1 PFAM: UvrD/REP helicase; KEGG: scl:sce3530 ATP-dependent DNA helicase YP_003098444.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_4017 serine/threonine protein kinase YP_003098445.1 PFAM: glycosyl transferase family 39; KEGG: glycosyl transferase family 39 YP_003098446.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tgr:Tgr7_0758 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_003098451.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content YP_003098452.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: bcz:BCZK0035 TatD related DNase YP_003098453.1 PFAM: transglycosylase domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: bsu:BSU00400 hypothetical protein YP_003098454.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_003098455.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rce:RC1_3351 ABC transporter, ATP-binding protein YP_003098456.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vsp:VS_2383 probable D-methionine transport system permease protein MetI YP_003098457.1 PFAM: NLPA lipoprotein; KEGG: pst:PSPTO_5216 NlpA family lipoprotein YP_003098458.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis YP_003098459.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcb:BCB4264_A2173 ABC transporter, ATP- binding protein YP_003098460.1 KEGG: WIP homolog YP_003098461.1 activates fatty acids by binding to coenzyme A YP_003098462.1 KEGG: mxa:MXAN_5077 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003098464.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: aeh:Mlg_0284 50S ribosomal protein L25P YP_003098465.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP YP_003098466.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: glo:Glov_0702 UDP-N-acetylglucosamine pyrophosphorylase YP_003098467.1 KEGG: hha:Hhal_1304 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003098468.1 KEGG: hne:HNE_1191 hypothetical protein YP_003098469.1 PFAM: fatty acid desaturase; KEGG: pfl:PFL_0262 fatty acid desaturase family proteiin YP_003098470.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_5545 transcriptional regulator, TetR family YP_003098471.1 KEGG: hypothetical protein YP_003098472.1 PFAM: glucose sorbosone dehydrogenase; KEGG: ppd:Ppro_1990 hypothetical protein YP_003098474.1 KEGG: gsu:GSU0017 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein YP_003098476.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: rce:RC1_0140 MazG family protein YP_003098477.1 PFAM: peptidase S41; SMART: peptidase S41; KEGG: swd:Swoo_3891 peptidase S41 YP_003098478.1 KEGG: scl:sce1066 hypothetical protein YP_003098479.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: azc:AZC_2926 hypothetical protein YP_003098480.1 KEGG: nar:Saro_2223 enolase; TIGRFAM: enolase; PFAM: enolase YP_003098481.1 PFAM: septum formation initiator YP_003098482.1 PFAM: protein of unknown function DUF501; KEGG: csa:Csal_3040 hypothetical protein YP_003098483.1 KEGG: GI22470 gene product from transcript GI22470- RA YP_003098484.1 PFAM: Ppx/GppA phosphatase; KEGG: scl:sce1705 hypothetical protein YP_003098485.1 PFAM: extracellular solute-binding protein family 5; KEGG: bsu:BSU11430 oligopeptide ABC transporter (binding protein) YP_003098486.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1184 dipeptide ABC transporter, permease protein YP_003098487.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet2850 ABC transporter inner membrane protein YP_003098488.1 KEGG: mrd:Mrad2831_4369 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098489.1 KEGG: bbt:BBta_6951 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098490.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: gur:Gura_2114 peptidase S10, serine carboxypeptidase YP_003098491.1 PFAM: uracil-DNA glycosylase; KEGG: ank:AnaeK_3689 uracil-DNA glycosylase protein YP_003098492.1 KEGG: gur:Gura_0189 transglutaminase domain- containing protein YP_003098494.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sml:Smlt4485 ATPase YP_003098495.1 PFAM: protein of unknown function DUF58; KEGG: mmr:Mmar10_2677 hypothetical protein YP_003098496.1 KEGG: GK24882 gene product from transcript GK24882- RA YP_003098497.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rsh:Rsph17029_3442 cyclic nucleotide- regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003098499.1 KEGG: hypothetical protein YP_003098500.1 PFAM: nitroreductase; KEGG: bcz:pE33L466_0413 NADH oxidase YP_003098501.1 PFAM: protein of unknown function DUF885; KEGG: nar:Saro_2356 hypothetical protein YP_003098502.1 KEGG: bid:Bind_2941 hypothetical protein YP_003098503.1 KEGG: scl:sce7515 hypothetical protein YP_003098504.1 PFAM: peptidase C60 sortase A and B YP_003098505.1 KEGG: bmn:BMA10247_0315 cell division protein FtsK YP_003098506.1 PFAM: protein of unknown function DUF1112; KEGG: xfa:XF2760 hypothetical protein YP_003098508.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_003098509.1 KEGG: afw:Anae109_3846 pyridoxal-5'-phosphate- dependent protein beta subunit; TIGRFAM: cystathionine beta-synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein YP_003098510.1 PFAM: hypothetical protein; KEGG: GI11778 gene product from transcript GI11778- RA YP_003098511.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afw:Anae109_3845 cystathionine gamma-lyase YP_003098512.1 KEGG: scl:sce7470 hypothetical protein YP_003098514.1 KEGG: bcy:Bcer98_0228 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003098515.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: ppg:PputGB1_0412 AsnC family transcriptional regulator YP_003098516.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: wol:WD0654 transcription elongation factor GreA YP_003098518.1 TIGRFAM: mycothiol conjugate amidase Mca; PFAM: LmbE family protein; KEGG: aba:Acid345_2880 LmbE-like protein YP_003098519.1 KEGG: SAT2; serine O-acetyl transferase; K00640 serine O-acetyltransferase YP_003098520.1 PFAM: protein of unknown function DUF1526; KEGG: rru:Rru_A1986 hypothetical protein YP_003098521.1 PFAM: protein of unknown function DUF255; KEGG: xau:Xaut_1832 hypothetical protein YP_003098522.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: afw:Anae109_1200 hemolysin III family channel protein YP_003098523.1 KEGG: bcj:BCAM2067 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003098524.1 KEGG: abb:ABBFA_000474 outer membrane protein A precursor (190 kDa antigen) YP_003098525.1 KEGG: sal:Sala_0599 hypothetical protein YP_003098526.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: dal:Dalk_3397 PhoH family protein YP_003098527.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_003098528.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA YP_003098529.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_003098530.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH3408 thioredoxin reductase YP_003098531.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: xca:xccb100_2984 hypothetical protein YP_003098532.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hypothetical protein YP_003098533.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_003098534.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: exonuclease VII small subunit; KEGG: AGAP012846-PA YP_003098535.1 KEGG: scl:sce2186 hypothetical protein YP_003098536.1 KEGG: hha:Hhal_1683 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_003098537.1 KEGG: GM22731 gene product from transcript GM22731- RA YP_003098538.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_003098539.1 KEGG: DNA helicase (SGS1 homologue); K03654 ATP- dependent DNA helicase RecQ YP_003098540.1 PFAM: protein of unknown function DUF195; KEGG: afw:Anae109_0527 hypothetical protein YP_003098541.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: afw:Anae109_2145 nuclease SbcCD, D subunit YP_003098542.1 KEGG: afw:Anae109_2144 DNA repair exonuclease, SbcC YP_003098543.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: sus:Acid_4002 methylated-DNA--protein- cysteine methyltransferase YP_003098544.1 KEGG: scl:sce6205 regulatory protein Ada; PFAM: AlkA domain protein; Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type YP_003098545.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_003098548.1 KEGG: hypothetical protein YP_003098552.1 involved in the fifth mannose transfer of phosphatidylinositol mannoside synthesis YP_003098553.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mxa:MXAN_6773 pterin-4-alpha- carbinolamine dehydratase YP_003098554.1 TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; KEGG: cvi:CV_3164 thiamin-binding periplasmic protein YP_003098555.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rfr:Rfer_3245 binding-protein-dependent transport systems inner membrane component YP_003098556.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bra:BRADO7092 spermidine/putrescine ABC transporter ATP-binding protein YP_003098557.1 KEGG: aeh:Mlg_1077 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_003098558.1 KEGG: proteophosphoglycan 5 YP_003098559.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0445 ABC transporter ATP-binding protein YP_003098560.1 KEGG: pau:PA14_50860 hypothetical protein YP_003098561.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: met:M446_6140 two component transcriptional regulator YP_003098562.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase YP_003098563.1 PFAM: NUDIX hydrolase; KEGG: scl:sce8529 Nudix/MutT family protein YP_003098564.1 KEGG: hsm:HSM_0044 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003098565.1 PFAM: YCII-related; KEGG: bpy:Bphyt_0556 YCII-related YP_003098567.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: aba:Acid345_4404 GTP-binding protein TypA YP_003098568.1 PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_1835 extracellular solute-binding protein, family 5 YP_003098569.1 PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_1835 extracellular solute-binding protein, family 5 YP_003098570.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1834 binding-protein-dependent transport systems inner membrane component YP_003098571.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_1833 binding-protein-dependent transport systems inner membrane component YP_003098572.1 KEGG: bcs:BCAN_B1102 oligopeptide/dipeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098573.1 KEGG: bra:BRADO1097 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003098574.1 TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha- D- glucopyranosidedeacetylase; PFAM: LmbE family protein; KEGG: aba:Acid345_2880 LmbE-like protein YP_003098576.1 KEGG: met:M446_5119 flagellar hook-length control protein YP_003098577.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ccs:CCNA_02292 acetyltransferase YP_003098578.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vei:Veis_3502 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_003098579.1 PFAM: aminotransferase class I and II; KEGG: afw:Anae109_3944 aminotransferase class I and II YP_003098580.1 KEGG: vch:VC2329 2,3,4,5-tetrahydropyridine-2- carboxylate N-succinyltransferase YP_003098581.1 catalyzes the formation of succinate and diaminoheptanedioate from succinyldiaminoheptanedioate YP_003098582.1 PFAM: conserved hypothetical protein; KEGG: hypothetical protein YP_003098583.1 PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_A2111 hypothetical protein YP_003098584.1 PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; acetyl xylan esterase; KEGG: sml:Smlt2609 X-Pro dipeptidyl- peptidase protein YP_003098585.1 KEGG: ade:Adeh_1496 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003098586.1 PFAM: transcriptional regulator PadR family protein; KEGG: aba:Acid345_4626 transcriptional regulator, PadR family YP_003098587.1 KEGG: GD17417 gene product from transcript GD17417- RA YP_003098589.1 KEGG: tmz:Tmz1t_2227 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_003098590.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02424 transcriptional regulator, TetR family YP_003098591.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bph:Bphy_2359 alcohol dehydrogenase YP_003098592.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_3929 TetR family transcriptional regulator YP_003098593.1 KEGG: met:M446_0017 binding-protein-dependent transport systems inner membrane component YP_003098594.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dac:Daci_0568 enoyl-CoA hydratase/isomerase YP_003098595.1 PFAM: PaaX domain protein domain; PaaX domain protein; KEGG: bha:BH0194 repressor in the phenylacetic acid catabolic pathway YP_003098597.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: rce:RC1_1566 leucyl aminopeptidase PepA YP_003098598.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU40670 hypothetical protein YP_003098599.1 PFAM: major facilitator superfamily MFS_1; KEGG: acr:Acry_1491 major facilitator transporter YP_003098600.1 TIGRFAM: glycogen synthase; PFAM: glycosyl transferase group 1; KEGG: bmj:BMULJ_06045 glycosyltransferase YP_003098601.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mxa:MXAN_1524 glucose-1-phosphate adenylyltransferase YP_003098602.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sus:Acid_0793 ECF subfamily RNA polymerase sigma-24 factor YP_003098603.1 KEGG: similar to sperm associated antigen 8 isoform 2 YP_003098604.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rfr:Rfer_2959 peptidase S1 and S6, chymotrypsin/Hap YP_003098605.1 mediates the export of protein precursors bearing twin-arginine signal peptides YP_003098606.1 PFAM: protein of unknown function DUF59; KEGG: bcr:BCAH187_A3588 mrp protein YP_003098607.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pst:PSPTO_3861 MarR family transcriptional regulator YP_003098608.1 PFAM: protein of unknown function DUF1003; KEGG: ppf:Pput_1917 hypothetical protein YP_003098609.1 PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: gur:Gura_2041 MgtE intracellular region YP_003098610.1 PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; KEGG: pap:PSPA7_3432 streptomycin 3''-kinase (streptomycin 3''-phosphotransferase) (SPH) YP_003098612.1 PFAM: HpcH/HpaI aldolase; KEGG: sil:SPO1565 citrate lyase YP_003098613.1 KEGG: har:HEAR2359 permease YP_003098614.1 PFAM: extracellular solute-binding protein family 1; KEGG: noc:Noc_0282 extracellular solute-binding protein YP_003098615.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0281 ABC transporter, inner membrane subunit YP_003098616.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: noc:Noc_0280 ABC transporter, inner membrane subunit YP_003098617.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: noc:Noc_0279 ABC transporter, ATPase subunit YP_003098618.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpb:RPB_3589 short-chain dehydrogenase/reductase SDR YP_003098620.1 PFAM: transcriptional regulator PadR family protein; KEGG: bmj:BMULJ_03145 PadR-like family transcriptional regulator YP_003098621.1 KEGG: mno:Mnod_7454 hypothetical protein YP_003098623.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: reh:H16_A0087 Mg2+ and Co2+ transporter YP_003098624.1 KEGG: sil:SPO0916 hypothetical protein YP_003098626.1 PFAM: membrane-flanked domain; KEGG: acr:Acry_0579 membrane-flanked domain- containing protein YP_003098627.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mxa:MXAN_2739 hypothetical protein YP_003098628.1 KEGG: mxa:MXAN_1877 hypothetical protein YP_003098629.1 PFAM: alpha/beta hydrolase fold; KEGG: met:M446_0531 alpha/beta hydrolase fold YP_003098630.1 KEGG: dno:DNO_0690 hypothetical protein YP_003098631.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: rle:RL3597 DEAD box ATP-dependent RNA helicase protein YP_003098635.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_5545 transcriptional regulator, TetR family YP_003098636.1 KEGG: afr:AFE_2323 hypothetical protein YP_003098637.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_5545 transcriptional regulator, TetR family YP_003098638.1 PFAM: alpha/beta hydrolase fold; KEGG: rsp:RSP_1258 hydrolase YP_003098640.1 The proteins in this cluster have high sequence similarity to MoeB and are possibly involved in the synthesis of molybdopterin, but there has been no biochemical or physiological characterization. There is also no genetic linkage to other molybdopterin cofactor synthesis proteins. These proteins are similar to a Pseudomonas stutzeri protein which is essential to pyridine-2,6-bis(thiocarboxylic acid) synthesis that possibly activates a substrate by adenylation YP_003098641.1 PFAM: aminoglycoside phosphotransferase; KEGG: rle:RL1223 hypothetical protein YP_003098642.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: msl:Msil_3772 molybdopterin oxidoreductase YP_003098643.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: scl:sce3488 nitrite reductase YP_003098644.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr2806 nitrite extrusion protein YP_003098645.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: bam:Bamb_3936 nitrite reductase (NAD(P)H), large subunit YP_003098646.1 TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_0318 nitrite reductase (NAD(P)H) large subunit, NirD YP_003098647.1 PFAM: uroporphyrinogen III synthase HEM4; transcriptional regulator domain protein; KEGG: scl:sce6449 transcriptional regulator YP_003098648.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rso:RS03744 transmembrane protein YP_003098651.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pst:PSPTO_1307 DNA-binding heavy metal response regulator YP_003098652.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gsu:GSU0452 sensor histidine kinase YP_003098654.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: bpy:Bphyt_4906 TrkA-N domain protein YP_003098655.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: mgm:Mmc1_1548 peptidase M20 YP_003098656.1 KEGG: mxa:MXAN_6481 hypothetical protein YP_003098658.1 PFAM: UvrD/REP helicase; KEGG: xau:Xaut_0776 UvrD/REP helicase YP_003098659.1 PFAM: UvrD/REP helicase; KEGG: ank:AnaeK_0104 UvrD/REP helicase YP_003098660.1 PFAM: methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: aci:ACIAD2864 methyltransferase YP_003098661.1 SMART: hypothetical protein; KEGG: oca:OCAR_7425 TPR repeat protein YP_003098662.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2196 short chain oxidoreductase YP_003098663.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: scl:sce1423 LysR family transcriptional regulator YP_003098664.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: atc:AGR_C_3948 conserved hypothetical protein PA4717 YP_003098665.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: dno:DNO_0928 hypothetical protein YP_003098666.1 KEGG: hypothetical protein YP_003098667.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: pen:PSEEN1871 DNA-binding protein HU-beta YP_003098668.1 PFAM: protein of unknown function DUF1470; KEGG: bcm:Bcenmc03_4753 hypothetical protein YP_003098669.1 PFAM: alpha/beta hydrolase fold; KEGG: msl:Msil_2561 alpha/beta hydrolase fold protein YP_003098670.1 PFAM: peptidase M16 domain protein; KEGG: afw:Anae109_0081 peptidase M16 domain- containing protein YP_003098671.1 PFAM: peptidase M16 domain protein; KEGG: mxa:MXAN_1624 peptidase, M16 (pitrilysin) family YP_003098672.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; Zinc ribbon NADH pyrophosphatase; KEGG: xcv:XCV0537 NUDIX hydrolase family protein YP_003098673.1 PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon YP_003098674.1 PFAM: regulatory protein TetR; KEGG: scl:sce8247 TetR family transcriptional regulator YP_003098675.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sus:Acid_6576 amidohydrolase YP_003098676.1 KEGG: scl:sce2125 hypothetical protein YP_003098677.1 KEGG: afw:Anae109_1073 hypothetical protein YP_003098678.1 KEGG: scl:sce2127 hypothetical protein YP_003098679.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: glo:Glov_3553 cobalamin biosynthesis protein CobD YP_003098680.1 KEGG: bbt:BBta_2034 SURF1 family protein YP_003098681.1 PFAM: fructosamine kinase; aminoglycoside phosphotransferase; KEGG: hch:HCH_00321 fructosamine-3-kinase YP_003098682.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: rru:Rru_A3646 protein tyrosine phosphatase YP_003098683.1 SMART: HNH nuclease; KEGG: ank:AnaeK_4158 HNH nuclease YP_003098685.1 PFAM: aminotransferase class I and II; KEGG: cko:CKO_02518 threonine-phosphate decarboxylase YP_003098686.1 PFAM: protein of unknown function DUF34; KEGG: pca:Pcar_2677 hypothetical protein YP_003098687.1 PFAM: protein of unknown function DUF164; KEGG: wsu:WS2117 hypothetical protein YP_003098688.1 PFAM: phosphoglycerate mutase; ribonuclease H; KEGG: mxa:MXAN_5728 ribonuclease H YP_003098689.1 PFAM: NADPH-dependent FMN reductase; KEGG: cti:RALTA_A1785 NAD(P)H-dependent FMN reductase, sulfate starvation-induced protein YP_003098690.1 KEGG: hypothetical protein YP_003098692.1 KEGG: GJ12100 gene product from transcript GJ12100- RA YP_003098693.1 KEGG: bcr:BCAH187_E0044 hypothetical protein YP_003098694.1 KEGG: ajs:Ajs_4066 single-strand binding protein YP_003098695.1 KEGG: hypothetical protein YP_003098696.1 PFAM: NLP/P60 protein; KEGG: gme:Gmet_2365 NLP/P60:sporulation-related protein YP_003098697.1 KEGG: scl:sce1554 prolipoprotein diacylglyceryl transferase YP_003098699.1 TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; Semialdehyde dehydrogenase NAD - binding; 6- phosphogluconate dehydrogenase NAD-binding; KEGG: oca:OCAR_5001 NADPH-dependent f420 reductase YP_003098700.1 KEGG: scl:sce7051 periplasmic substrate- binding protein YP_003098701.1 KEGG: bte:BTH_II2193 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003098702.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: GK16139 gene product from transcript GK16139- RA YP_003098703.1 SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein YP_003098704.1 PFAM: aminoglycoside phosphotransferase YP_003098705.1 SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein YP_003098706.1 PFAM: Radical SAM domain protein; KEGG: rpd:RPD_4322 radical SAM family protein YP_003098708.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003098709.1 PFAM: protein of unknown function DUF397 YP_003098710.1 KEGG: glo:Glov_0957 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: ketopantoate hydroxymethyltransferase YP_003098711.1 KEGG: bmj:BMULJ_04515 predicted hydrolase or acyltransferase YP_003098712.1 catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003098713.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: spe:Spro_2416 TAP domain-containing protein YP_003098714.1 KEGG: csa:Csal_0495 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003098715.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: sat:SYN_01628 glutamine synthetase YP_003098716.1 TIGRFAM: methyltransferase FkbM family; KEGG: pzu:PHZ_c0476 hypothetical protein YP_003098717.1 PFAM: phosphate transporter; KEGG: glo:Glov_0587 phosphate transporter YP_003098719.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme YP_003098721.1 KEGG: sml:Smlt3524 autotransporter subtilisin-like protease YP_003098722.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aha:AHA_2241 HAD family hydrolase YP_003098723.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: yen:YE1303 hypothetical protein YP_003098727.1 KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein YP_003098730.1 PFAM: integrase family protein; KEGG: bcb:BCB4264_A2589 DNA integration/recombination/invertion protein YP_003098731.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: gur:Gura_2228 glutamine synthetase, type I YP_003098732.1 PFAM: hypothetical protein; KEGG: shl:Shal_2580 RDD domain-containing protein YP_003098734.1 PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: bam:Bamb_1322 UvrD/REP helicase YP_003098735.1 PFAM: transcription factor WhiB; HMG-I and HMG-Y DNA-binding domain protein YP_003098737.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: smt:Smal_2740 ubiquinone biosynthesis O- methyltransferase YP_003098739.1 PFAM: ABC-1 domain protein; KEGG: mxa:MXAN_0725 ABC1 domain protein YP_003098740.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ank:AnaeK_3014 UBA/ThiF-type NAD/FAD binding protein YP_003098742.1 PFAM: protein of unknown function DUF45; KEGG: gox:GOX1405 hypothetical protein YP_003098743.1 KEGG: met:M446_4394 NADH-quinone oxidoreductase, E subunit YP_003098744.1 PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: bha:BH2586 hypothetical protein YP_003098746.1 PFAM: protein of unknown function UPF0182; KEGG: reh:H16_A1615 hypothetical membrane spanning protein YP_003098748.1 PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce6005 transcriptional regulator YP_003098749.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: gsu:GSU2278 peptide chain release factor 2 YP_003098750.1 KEGG: bsu:BSU35260 cell-division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; SMART: ATPase AAA YP_003098751.1 PFAM: protein of unknown function DUF214; KEGG: ppd:Ppro_2411 hypothetical protein YP_003098752.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: ppd:Ppro_1314 SsrA-binding protein YP_003098753.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: tgr:Tgr7_2171 two component transcriptional regulator, LuxR family YP_003098754.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sus:Acid_2792 PAS/PAC sensor signal transduction histidine kinase YP_003098756.1 KEGG: rce:RC1_1438 ATP-dependent helicase protein, TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003098757.1 PFAM: glycosyl transferase family 2; KEGG: gbe:GbCGDNIH1_1979 HpnB protein YP_003098758.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr0192 hypothetical protein YP_003098759.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: afw:Anae109_0137 major facilitator transporter YP_003098760.1 KEGG: maq:Maqu_3013 DsbA oxidoreductase YP_003098761.1 KEGG: dps:DP1266 coenzyme F390 synthetase II YP_003098762.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: bsu:BSU15770 protein kinase YP_003098763.1 PFAM: protein of unknown function DUF450; SMART: DEAD-like helicase; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase YP_003098764.1 PFAM: restriction modification system DNA specificity domain; KEGG: rsh:Rsph17029_1858 restriction modification system DNA specificity subunit YP_003098765.1 PFAM: N-6 DNA methylase; KEGG: hha:Hhal_1155 N-6 DNA methylase YP_003098766.1 PFAM: N-6 DNA methylase; RNA methylase; KEGG: bvi:Bcep1808_0009 N-6 DNA methylase YP_003098767.1 KEGG: hypothetical protein YP_003098769.1 KEGG: rde:RD1_2154 hypothetical protein YP_003098770.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_4295 response regulator receiver modulated serine phosphatase YP_003098771.1 PFAM: cobalamin B12-binding domain protein; KEGG: rpc:RPC_1467 cobalamin B12-binding YP_003098772.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: swi:Swit_1492 anti-sigma-factor antagonist YP_003098774.1 PFAM: extracellular solute-binding protein family 1; KEGG: smd:Smed_3329 extracellular solute-binding protein family 1 YP_003098775.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein YP_003098776.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04137 transport system permease ABC transporter protein YP_003098777.1 KEGG: acp:A2cp1_3283 hypothetical protein YP_003098778.1 PFAM: protein of unknown function DUF718; KEGG: bcm:Bcenmc03_6232 L-rhamnose 1-epimerase YP_003098779.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: aav:Aave_4199 transcriptional regulator, LacI family YP_003098780.1 PFAM: hypothetical protein; hypothetical protein; hypothetical protein; SMART: helix-turn-helix domain protein; hypothetical protein; KEGG: scl:sce6858 hypothetical protein YP_003098781.1 PFAM: terpene synthase; KEGG: mxa:MXAN_6247 terpene synthase, metal binding domain protein YP_003098782.1 PFAM: NUDIX hydrolase; KEGG: oan:Oant_4146 NUDIX hydrolase YP_003098784.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: afw:Anae109_0769 heat shock protein DnaJ domain-containing protein YP_003098785.1 KEGG: scl:sce6462 hypothetical protein YP_003098786.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: azc:AZC_3175 FMNH2-dependent monooxygenase YP_003098787.1 KEGG: aba:Acid345_1175 translation initiation factor 2B subunit I family (IF-2BI); TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_003098788.1 TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: tgr:Tgr7_2625 2,3-diketo-5-methylthio-1- phosphopentane phosphatase YP_003098789.1 TIGRFAM: methylthioribulose-1-phosphate dehydratase; PFAM: class II aldolase/adducin family protein; KEGG: tgr:Tgr7_2623 methylthioribulose-1-phosphate dehydratase YP_003098790.1 PFAM: acireductone dioxygenase ARD; KEGG: tgr:Tgr7_2624 acireductone dioxygenase ARD YP_003098791.1 PFAM: aminoglycoside phosphotransferase; KEGG: cvi:CV_1007 serine/threonine protein kinase YP_003098792.1 KEGG: bha:BH2614 cytochrome Caa3 oxidase (subunit I); TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I YP_003098793.1 KEGG: scl:sce0663 hypothetical protein; TIGRFAM: phosphoserine phosphatase SerB; HAD- superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; amino acid-binding ACT domain protein YP_003098794.1 PFAM: protein of unknown function UPF0099; KEGG: predicted protein; K04794 peptidyl-tRNA hydrolase, PTH2 family YP_003098796.1 KEGG: phospholipase/phosphatidylserine synthase; PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase YP_003098797.1 SMART: helicase c2; DEAD-like helicase; KEGG: mxa:MXAN_6717 ATP-dependent helicase YP_003098798.1 PFAM: BioY protein; KEGG: mxa:MXAN_2207 BioY family protein YP_003098799.1 KEGG: cak:Caul_0228 polysaccharide deacetylase YP_003098801.1 KEGG: ect:ECIAI39_4258 invasin/intimin protein YP_003098802.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein YP_003098803.1 KEGG: rso:RSp0510 UDP-N-acetylglucosamine 2- epimerase protein; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003098805.1 PFAM: isochorismatase hydrolase; KEGG: sme:SMc02275 pyrazinamidase/nicotinamidase (includes: pyrazinamidase, nicotinamidase) protein YP_003098806.1 TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: rpi:Rpic_4654 nicotinate phosphoribosyltransferase YP_003098807.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: bbr:BB2017 ATP-dependent Clp protease adaptor protein ClpS YP_003098809.1 KEGG: aav:Aave_1804 peptidase S58, DmpA YP_003098810.1 KEGG: scl:sce7049 hypothetical protein YP_003098811.1 PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: nmu:Nmul_A0971 Mov34/MPN/PAD-1 YP_003098812.1 PFAM: thiamineS protein; KEGG: hch:HCH_02849 molybdopterin converting factor, small subunit YP_003098813.1 TIGRFAM: cysteine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: reh:H16_A0807 cysteine synthase YP_003098814.1 PFAM: beta-lactamase domain protein; KEGG: bcr:BCAH187_A1247 metallo-beta-lactamase family protein YP_003098815.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sal:Sala_3160 senescence marker protein-30 (SMP-30) YP_003098816.1 PFAM: rhomboid family protein; KEGG: amc:MADE_01334 rhomboid-like protein YP_003098817.1 converts L-glutamate to D-glutamate, a component of peptidoglycan YP_003098818.1 PFAM: beta-lactamase domain protein; KEGG: dal:Dalk_3435 beta-lactamase domain protein YP_003098819.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: scl:sce7477 hypothetical protein YP_003098820.1 PFAM: OsmC family protein; KEGG: mxa:MXAN_2740 OsmC/Ohr family protein YP_003098821.1 KEGG: afw:Anae109_3915 hypothetical protein YP_003098822.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_003098823.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: dds:Ddes_1892 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_003098824.1 KEGG: bph:Bphy_3741 hypothetical protein YP_003098825.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: yen:YE1135 thioredoxin-dependent thiol peroxidase YP_003098826.1 KEGG: aba:Acid345_1279 hypothetical protein YP_003098827.1 PFAM: luciferase-like monooxygenase; KEGG: bvi:Bcep1808_1087 luciferase family protein YP_003098828.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: oan:Oant_2127 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003098829.1 PFAM: hypothetical protein; KEGG: pde:Pden_3867 DedA family protein YP_003098830.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: vvu:VV1_0002 GTPase YP_003098832.1 PFAM: regulatory protein TetR; KEGG: bat:BAS3063 TetR family transcriptional regulator YP_003098833.1 PFAM: esterase; KEGG: mxa:MXAN_4935 esterase YP_003098834.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RSc0624 zinc-dependent alcohol dehydrogenase oxidoreductase protein YP_003098835.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: rsh:Rsph17029_3564 cobyric acid synthase YP_003098836.1 PFAM: domain of unknown function DUF1727; Mur ligase middle domain protein; KEGG: ilo:IL0432 UDP-N-acetylmuramyl pentapeptide synthase YP_003098837.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: reu:Reut_A1326 anaerobic benzoate catabolism transcriptional regulator YP_003098838.1 PFAM: protein of unknown function DUF218; KEGG: mxa:MXAN_6927 SanA protein YP_003098839.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bce:BC5265 membrane-bound transcriptional regulator LytR YP_003098840.1 KEGG: hypothetical protein; K01878 glycyl-tRNA synthetase alpha chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl- tRNA synthetase beta subunit YP_003098841.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003098842.1 KEGG: rpi:Rpic_4074 D-xylose ABC transporter, periplasmic substrate-binding protein YP_003098843.1 KEGG: aba:Acid345_1276 hypothetical protein YP_003098844.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mpt:Mpe_A2202 cold-shock DNA-binding protein family protein YP_003098845.1 KEGG: cak:Caul_1308 hypothetical protein YP_003098846.1 KEGG: aba:Acid345_1677 alpha-galactosidase; PFAM: glycosyl hydrolase family 98 carbohydrate binding module; glycoside hydrolase clan GH- D; SMART: glycosyl hydrolase family 98 carbohydrate binding module YP_003098847.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: sse:Ssed_3347 acyl-CoA dehydrogenase-like protein YP_003098848.1 PFAM: hypothetical protein; KEGG: mxa:MXAN_7273 SWIM zinc finger domain protein YP_003098849.1 KEGG: scl:sce3369 SWF/SNF family helicase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003098850.1 KEGG: gbm:Gbem_1481 transglycosylase-associated protein YP_003098851.1 KEGG: Hypothetical protein CBG18987 YP_003098852.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: sfu:Sfum_2797 DNA-cytosine methyltransferase YP_003098853.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: ajs:Ajs_2197 very short patch repair protein YP_003098854.1 KEGG: scl:sce2746 protein kinase YP_003098856.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein YP_003098857.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ank:AnaeK_1721 ABC transporter-related protein YP_003098858.1 3'-5' exoribonuclease specific for small oligoribonuclotides YP_003098859.1 PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_0079 major facilitator transporter YP_003098860.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_2532 AraC family transcriptional regulator YP_003098861.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: cak:Caul_0312 DeoR family transcriptional regulator YP_003098862.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: gbm:Gbem_3234 1-phosphofructokinase YP_003098863.1 TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: vco:VC0395_A1421 PTS system, fructose- specific IIABC component YP_003098864.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; KEGG: rsh:Rsph17029_0435 PTS system, fructose subfamily, IIC subunit YP_003098865.1 PFAM: membrane-flanked domain; KEGG: bha:BH1721 hypothetical protein YP_003098866.1 PFAM: membrane-flanked domain; KEGG: bsu:BSU04590 hypothetical protein YP_003098868.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bur:Bcep18194_C6898 AMP-dependent synthetase and ligase YP_003098870.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: atc:AGR_C_466 hypothetical protein YP_003098871.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH- dependent FMN reductase; KEGG: pmy:Pmen_1298 NAD(P)H dehydrogenase (quinone) YP_003098872.1 KEGG: CG13731 YP_003098873.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: bcm:Bcenmc03_0217 hypothetical protein YP_003098875.1 part of the preprotein secretory system; forms a complex with protein YajC; SecDFyajC stimulates the proton motive force-driven protein translocation, seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF YP_003098876.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: hypothetical protein; K00101 L-lactate dehydrogenase (cytochrome) YP_003098877.1 KEGG: bha:BH1891 hypothetical protein YP_003098878.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: xca:xccb100_0257 transcriptional regulator, AraC family YP_003098879.1 PFAM: carbohydrate binding family 6; glycoside hydrolase family 16; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003098880.1 PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; KEGG: hha:Hhal_2421 DNA polymerase I YP_003098881.1 PFAM: hypothetical protein; KEGG: bid:Bind_1912 hypothetical protein YP_003098882.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: smd:Smed_6054 methyltransferase type 11 YP_003098883.1 PFAM: proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase YP_003098884.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce4459 1-pyrroline-5-carboxylate dehydrogenase YP_003098885.1 KEGG: bha:BH1072 hypothetical protein YP_003098886.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: gox:GOX1827 inner membrane protein translocase component YidC YP_003098888.1 KEGG: bbt:BBta_0026 uridine kinase YP_003098889.1 PFAM: protein of unknown function DUF402 YP_003098890.1 PFAM: GAF domain protein; transcriptional regulator domain protein; KEGG: rme:Rmet_4104 sigma54 specific transcriptional regulator with GAF sensor, fis family YP_003098891.1 PFAM: Aldehyde Dehydrogenase; KEGG: mxa:MXAN_5040 aldehyde dehydrogenase family protein YP_003098892.1 PFAM: protein of unknown function DUF779; KEGG: mxa:MXAN_5039 hypothetical protein YP_003098893.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: cak:Caul_0293 beta-N-acetylhexosaminidase YP_003098894.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: reh:H16_B1017 protein of the adenylate cyclase family YP_003098895.1 KEGG: mxa:MXAN_2991 adventurous gliding motility protein AglZ YP_003098896.1 KEGG: hypothetical protein YP_003098897.1 PFAM: formyl transferase domain protein; KEGG: kpe:KPK_0268 UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_003098898.1 PFAM: Amidohydrolase 3; amidohydrolase; KEGG: smd:Smed_5168 amidohydrolase 3 YP_003098899.1 KEGG: scl:sce4531 hypothetical protein YP_003098900.1 PFAM: peptidase S14 ClpP; KEGG: dal:Dalk_1458 ATP-dependent Clp protease, proteolytic subunit ClpP YP_003098901.1 PFAM: peptidase S14 ClpP; KEGG: pmu:PM1976 ATP-dependent Clp protease proteolytic subunit YP_003098903.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: pol:Bpro_0315 filamentation induced by cAMP protein Fic YP_003098904.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: gur:Gura_1136 helix-turn-helix domain- containing protein YP_003098905.1 PFAM: NUDIX hydrolase; KEGG: bba:Bd2755 ATP/GTP-binding protein YP_003098908.1 PFAM: aminoglycoside phosphotransferase; KEGG: sal:Sala_1765 aminoglycoside phosphotransferase YP_003098909.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003098910.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dac:Daci_0148 histidine utilization repressor YP_003098915.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: abu:Abu_1159 cell division protein FtsK YP_003098916.1 PFAM: transcription factor WhiB YP_003098919.1 PFAM: integrase family protein; KEGG: xau:Xaut_0620 integrase family protein YP_003098920.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: gox:GOX0577 transcriptional regulator YP_003098921.1 PFAM: major facilitator superfamily MFS_1; KEGG: rce:RC1_3733 major facilitator superfamily (MSF) transporter YP_003098923.1 PFAM: copper resistance D domain protein; KEGG: csa:Csal_0081 hypothetical protein YP_003098924.1 PFAM: ABC transporter; KEGG: ank:AnaeK_4023 ABC transporter YP_003098925.1 KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003098926.1 PFAM: regulatory protein TetR; KEGG: scl:sce5643 TetR family transcriptional regulator YP_003098927.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ajs:Ajs_4211 single-strand binding protein YP_003098928.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_003098929.1 KEGG: apomucin YP_003098930.1 PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 glutamate dehydrogenase (NAD) YP_003098931.1 PFAM: alpha amylase catalytic region; glycoside hydrolase starch-binding; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase all-beta; KEGG: sde:Sde_2938 ATPase YP_003098932.1 KEGG: aav:Aave_4199 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003098933.1 PFAM: thioesterase superfamily protein; KEGG: xau:Xaut_1411 thioesterase superfamily protein YP_003098935.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: alpha-glucosidase; K01187 alpha-glucosidase YP_003098936.1 PFAM: globin; KEGG: bha:BH2854 hypothetical protein YP_003098937.1 PFAM: MscS Mechanosensitive ion channel; KEGG: tbd:Tbd_0499 mechanosensitive ion channel YP_003098938.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: scl:sce8590 prolyl oligopeptidase YP_003098939.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: aba:Acid345_4201 HNH endonuclease YP_003098940.1 KEGG: RGD1561483, RGD1561483_predicted; similar to ankyrin repeat domain 26 YP_003098943.1 TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: scl:sce2331 membrane alanyl aminopeptidase YP_003098945.1 KEGG: rpi:Rpic_1101 lipoprotein YP_003098946.1 TIGRFAM: ribose 5-phosphate isomerase; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase; KEGG: mca:MCA0043 ribose 5-phosphate isomerase B YP_003098948.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: hypothetical protein YP_003098949.1 KEGG: mno:Mnod_0189 periplasmic ligand- binding sensor protein YP_003098950.1 KEGG: scl:sce0310 acetyltransferase YP_003098952.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bsu:BSU36160 hypothetical protein YP_003098953.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: bcr:BCAH187_A4609 trigger factor YP_003098954.1 PFAM: peptidase S14 ClpP; KEGG: aba:Acid345_1560 ATP-dependent Clp protease proteolytic subunit ClpP YP_003098955.1 binds and unfolds substrates as part of the ClpXP protease YP_003098956.1 PFAM: protein of unknown function DUF1234; KEGG: nis:NIS_1664 hypothetical protein YP_003098957.1 PFAM: esterase; KEGG: endo-1,4-beta-xylanase YP_003098958.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: ade:Adeh_0826 formate dehydrogenase family accessory protein FdhD YP_003098959.1 PFAM: major facilitator superfamily MFS_1; KEGG: nma:NMA1574 integral membrane transporter YP_003098961.1 PFAM: FAD dependent oxidoreductase; KEGG: acp:A2cp1_3444 amine oxidase YP_003098963.1 KEGG: mxa:MXAN_4341 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_003098965.1 KEGG: ade:Adeh_3310 zinc finger/thioredoxin YP_003098966.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain YP_003098967.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: gme:Gmet_2475 folylpolyglutamate synthetase YP_003098970.1 KEGG: aba:Acid345_2329 alpha-1,6-glucosidases, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: alpha amylase catalytic region; pullanase- associated protein; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_003098972.1 KEGG: bsu:BSU22730 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003098973.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mgm:Mmc1_3306 ABC transporter YP_003098974.1 PFAM: ABC transporter; KEGG: hha:Hhal_0239 ABC transporter, NodJ family YP_003098975.1 PFAM: ABC transporter; KEGG: afr:AFE_3235 ABC transporter, permease protein, NodJ family YP_003098976.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pca:Pcar_2585 Fe-S oxidoreductase YP_003098977.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: aba:Acid345_1825 sigma-24, ECF subfamily YP_003098978.1 PFAM: regulatory protein LuxR; hypothetical protein; hypothetical protein; SMART: regulatory protein LuxR; hypothetical protein; KEGG: ade:Adeh_3797 hypothetical protein YP_003098979.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: prw:PsycPRwf_0697 ferric reductase-like protein YP_003098980.1 PFAM: ApbE family lipoprotein; KEGG: mca:MCA2411 thiamine biosynthesis lipoprotein ApbE YP_003098981.1 KEGG: HYR10; hyphally-regulated cell wall protein YP_003098982.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: acp:A2cp1_0256 peptidase S8 and S53 subtilisin kexin sedolisin YP_003098983.1 KEGG: glo:Glov_0470 radical SAM domain protein YP_003098984.1 KEGG: sde:Sde_3188 RNAse G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: translation initiation factor IF-2 domain protein; SMART: RNA binding S1 domain protein YP_003098985.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: tbd:Tbd_0864 50S ribosomal protein L21P YP_003098986.1 involved in the peptidyltransferase reaction during translation YP_003098987.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication YP_003098988.1 KEGG: mxa:MXAN_1357 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003098989.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bav:BAV1823 alpha-ketoglutarate permease YP_003098990.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bpl:BURPS1106A_2024 acetyltransferase YP_003098991.1 KEGG: maq:Maqu_0559 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003098992.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_003098993.1 PFAM: cytochrome P450; KEGG: scl:sce8913 cytochrome P450 CYP109C2 YP_003098994.1 KEGG: bha:BH1605 ferredoxin YP_003098995.1 KEGG: bsu:BSU25640 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003098996.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: ank:AnaeK_0226 iojap-like protein YP_003098997.1 PFAM: phosphoglycerate mutase; KEGG: reh:H16_A0493 phosphoglycerate mutase 2 protein YP_003098999.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bsu:BSU35480 hypothetical protein YP_003099000.1 TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein; PFAM: helix-hairpin-helix motif; KEGG: bsu:BSU25590 unspecific high-affinity DNA- binding protein YP_003099001.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: ank:AnaeK_2593 DNA internalization-related competence protein ComEC/Rec2 YP_003099003.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine YP_003099004.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: gbm:Gbem_0755 DNA polymerase III, delta subunit YP_003099005.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: bha:BH1339 30S ribosomal protein S20 YP_003099006.1 PFAM: protein of unknown function DUF81; KEGG: ppg:PputGB1_3567 hypothetical protein YP_003099007.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sfr:Sfri_0263 glyoxalase/bleomycin resistance protein/dioxygenase YP_003099008.1 KEGG: sal:Sala_0218 hypothetical protein YP_003099009.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sml:Smlt1263 transmembrane protein YP_003099011.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: aba:Acid345_3320 protein of unknown function DUF404 YP_003099012.1 PFAM: protein of unknown function DUF403; KEGG: aba:Acid345_3319 protein of unknown function DUF403 YP_003099013.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: ccs:CCNA_01672 transglutaminase-like enzyme, cysteine YP_003099014.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: bcy:Bcer98_3046 GTP-binding protein LepA YP_003099017.1 KEGG: pen:PSEEN1948 hypothetical protein YP_003099018.1 PFAM: carbohydrate-binding CenC domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: cja:CJA_2993 endo-chitinase, , chi18C YP_003099019.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: bpt:Bpet3829 2-nitropropane dioxygenase YP_003099020.1 PFAM: protein of unknown function DUF885; KEGG: sal:Sala_0679 hypothetical protein YP_003099021.1 PFAM: amino acid permease-associated region; KEGG: bsu:BSU07340 hypothetical protein YP_003099022.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_A1464 enoyl-CoA hydratase YP_003099023.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: xcv:XCV2170 oxidoreductase YP_003099025.1 PFAM: guanine-specific ribonuclease N1 and T1; KEGG: tmz:Tmz1t_1168 guanine-specific ribonuclease N1 and T1 YP_003099026.1 PFAM: Barstar (barnase inhibitor); KEGG: tmz:Tmz1t_1167 barstar (barnase inhibitor) YP_003099027.1 PFAM: protein of unknown function UPF0150; KEGG: dar:Daro_3012 hypothetical protein YP_003099028.1 PFAM: YcfA family protein; KEGG: abu:Abu_0898 hypothetical protein YP_003099029.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: cvi:CV_1567 precorrin-8X methylmutase YP_003099030.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aba:Acid345_0827 ABC aliphatic sulfonate transporter, inner membrane subunit YP_003099031.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0826 ABC transporter, ATPase subunit YP_003099032.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: afw:Anae109_0427 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein YP_003099033.1 KEGG: afw:Anae109_1643 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003099034.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_003099035.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: bsu:BSU15570 phosphoadenosine phosphosulfate YP_003099037.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: aba:Acid345_2373 nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like YP_003099038.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_003099039.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_003099040.1 PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: afr:AFE_2664 chaperone protein DnaJ YP_003099041.1 PFAM: protein of unknown function DUF558; KEGG: xca:xccb100_1268 hypothetical protein YP_003099042.1 PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce5221 hypothetical protein YP_003099043.1 PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce5221 hypothetical protein YP_003099044.1 KEGG: mxa:MXAN_0913 hypothetical protein YP_003099045.1 PFAM: histidine triad (HIT) protein; KEGG: afw:Anae109_0197 histidine triad (HIT) protein YP_003099046.1 PFAM: GCN5-related N-acetyltransferase; KEGG: atc:AGR_L_2832 hypothetical protein YP_003099047.1 PFAM: PhoH family protein; SMART: Hedgehog/intein hint domain protein; KEGG: mxa:MXAN_4738 PhoH family protein YP_003099048.1 PFAM: protein of unknown function UPF0054; KEGG: bsu:BSU25320 metalloprotease YP_003099049.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: scl:sce4286 hypothetical protein YP_003099050.1 KEGG: acp:A2cp1_0654 cytidine deaminase YP_003099051.1 KEGG: net:Neut_1332 ferredoxin 2fe-2s protein YP_003099052.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome YP_003099053.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA YP_003099054.1 KEGG: acr:Acry_2555 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003099057.1 PFAM: permease; KEGG: bcy:Bcer98_1540 permease YP_003099058.1 KEGG: bcy:Bcer98_1541 hypothetical protein YP_003099059.1 PFAM: ferric-uptake regulator; KEGG: gur:Gura_3002 ferric uptake regulator family protein YP_003099060.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pla:Plav_2471 regulatory protein ArsR YP_003099061.1 PFAM: Antibiotic biosynthesis monooxygenase YP_003099064.1 Catalyzes a two-step reaction, first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003099066.1 PFAM: carbonic anhydrase; KEGG: bac:BamMC406_5701 carbonate dehydratase YP_003099067.1 PFAM: sulphate transporter; xanthine/uracil/vitamin C permease; KEGG: psa:PST_4161 probable sulfate transporter YP_003099068.1 PFAM: proteinase inhibitor I4 serpin; SMART: proteinase inhibitor I4 serpin; KEGG: scl:sce5377 hypothetical protein YP_003099069.1 KEGG: aba:Acid345_0225 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003099070.1 PFAM: protein of unknown function DUF218; KEGG: aba:Acid345_2611 protein of unknown function DUF218 YP_003099071.1 PFAM: peptidase S51 dipeptidase E; KEGG: bsu:BSU08780 hypothetical protein YP_003099072.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: mno:Mnod_3704 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003099073.1 KEGG: DNA primase; K02316 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase DnaG DnaB-binding; SMART: zinc finger CHC2-family protein; DNA primase DnaG DnaB-binding; Toprim sub domain protein YP_003099074.1 KEGG: reu:Reut_A2115 DNA helicase/exodeoxyribonuclease V, subunit B YP_003099076.1 PFAM: NUDIX hydrolase; KEGG: kpn:KPN_04028 hypothetical protein YP_003099077.1 PFAM: protein of unknown function DUF218; KEGG: ppr:PBPRB0680 hypothetical protein YP_003099078.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rme:Rmet_2856 transcriptional regulator, histidine utilization repressor, GntR family YP_003099079.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: afw:Anae109_2699 response regulator receiver YP_003099080.1 PFAM: NUDIX hydrolase; KEGG: rpi:Rpic_3754 NUDIX hydrolase YP_003099081.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: hypothetical protein YP_003099082.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dar:Daro_2866 GntR family transcriptional regulator YP_003099086.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bac:BamMC406_0006 cell divisionFtsK/SpoIIIE YP_003099088.1 KEGG: hypothetical protein; K11233 osomolarity two- component system, response regulator SSK1 YP_003099091.1 PFAM: regulatory protein MerR; KEGG: nwi:Nwi_0824 hypothetical protein YP_003099092.1 PFAM: integrase family protein; KEGG: bat:BAS0415 prophage LambdaBa04, site- specific recombinase phage integrase family protein protein YP_003099093.1 KEGG: scl:sce5771 hypothetical protein YP_003099095.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate YP_003099097.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bce:BC5265 membrane-bound transcriptional regulator LytR YP_003099098.1 KEGG: afw:Anae109_0856 hypothetical protein YP_003099099.1 PFAM: glycosyl transferase family 2; polysaccharide deacetylase; KEGG: mno:Mnod_3023 polysaccharide deacetylase YP_003099100.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003099101.1 PFAM: nitric oxide synthase NOS; KEGG: scl:sce1582 nitric-oxide synthase, oxygenase subunit YP_003099102.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: eba:ebA4497 pyridine nucleotide transhydrogenase alpha subunit YP_003099104.1 KEGG: dvm:DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; EAL domain protein; PAS domain containing protein YP_003099105.1 PFAM: protein of unknown function DUF574; methyltransferase type 12; KEGG: scl:sce6070 hypothetical protein YP_003099106.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmj:BMULJ_04432 MarR family transcriptional regulator YP_003099107.1 PFAM: camphor resistance CrcB protein; KEGG: eli:ELI_01350 hypothetical protein YP_003099108.1 TIGRFAM: CrcB protein; PFAM: camphor resistance CrcB protein; KEGG: smd:Smed_1020 CrcB protein YP_003099109.1 KEGG: bcr:BCAH187_A2861 UvrD/Rep helicase family protein YP_003099110.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: dvm:DvMF_2927 2-hydroxy-3-oxopropionate reductase YP_003099111.1 KEGG: hypothetical protein YP_003099112.1 PFAM: regulatory protein TetR; KEGG: mlo:mll3939 TetR family transcriptional regulator YP_003099113.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0278 mercuric reductase, truncated YP_003099115.1 KEGG: hypothetical protein YP_003099117.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pzu:PHZ_c3203 ABC transporter, HlyB/MsbA family YP_003099118.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pzu:PHZ_c3203 ABC transporter, HlyB/MsbA family YP_003099120.1 PFAM: lanthionine synthetase C family protein; SMART: serine/threonine protein kinase; KEGG: smt:Smal_2130 serine/threonine protein kinase YP_003099122.1 PFAM: beta-ketoacyl synthase; KEGG: ade:Adeh_2746 3-oxoacyl-[acyl-carrier- protein] synthase II YP_003099123.1 carries the fatty acid chain in fatty acid biosynthesis YP_003099124.1 KEGG: bha:BH2883 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003099125.1 PFAM: acyl transferase; KEGG: bvi:Bcep1808_1041 [acyl-carrier-protein] S- malonyltransferase YP_003099126.1 KEGG: reu:Reut_B5661 CdaR family transcriptional regulator YP_003099127.1 PFAM: Conserved hypothetical protein; KEGG: pfo:Pfl01_1775 TM helix protein YP_003099128.1 TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; KEGG: mpt:Mpe_A2849 transporter YP_003099129.1 PFAM: extracellular solute-binding protein family 1; KEGG: mxa:MXAN_7295 sugar ABC transporter, periplasmic sugar-binding protein YP_003099130.1 KEGG: hypothetical protein YP_003099131.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC YP_003099133.1 KEGG: ccs:CCNA_02657 hypothetical protein YP_003099134.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pzu:PHZ_p0072 peroxiredoxin YP_003099137.1 PFAM: saccharopine dehydrogenase; KEGG: pfl:PFL_3454 hypothetical protein YP_003099138.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_003099139.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR YP_003099140.1 PFAM: luciferase-like monooxygenase; KEGG: rpi:Rpic_0157 luciferase-like monooxygenase YP_003099141.1 KEGG: afw:Anae109_3917 hypothetical protein YP_003099142.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: aba:Acid345_4305 lipoate-protein ligase B YP_003099143.1 SMART: helix-turn-helix domain protein; KEGG: bxe:Bxe_B0902 XRE family transcriptional regulator YP_003099144.1 KEGG: bsu:BSU06870 hypothetical protein YP_003099145.1 PFAM: NmrA family protein; KEGG: scl:sce0707 hypothetical protein YP_003099146.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: ade:Adeh_2905 phosphoesterase, PA-phosphatase related YP_003099147.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: dal:Dalk_2335 domain of unknown function DUF1731 YP_003099148.1 KEGG: aba:Acid345_4350 2-oxoglutarate dehydrogenase E2 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein YP_003099149.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_003099151.1 KEGG: scl:sce9254 secreted protein YP_003099152.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: pst:PSPTO_1271 leucyl aminopeptidase YP_003099153.1 KEGG: bph:Bphy_0096 amino acid permease-associated region YP_003099154.1 KEGG: swi:Swit_0778 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_003099155.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: pde:Pden_1566 cobalamin 5'-phosphate synthase YP_003099156.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole YP_003099157.1 PFAM: cobalbumin biosynthesis protein; KEGG: bbt:BBta_3140 adenosylcobinamide kinase YP_003099158.1 PFAM: aldo/keto reductase; KEGG: mxa:MXAN_6482 oxidoreductase, aldo/keto reductase family YP_003099162.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: bvi:Bcep1808_0647 iron-sulfur cluster insertion protein ErpA YP_003099164.1 KEGG: bsu:BSU30540 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003099165.1 TIGRFAM: cytochrome C oxidase, subunit II; PFAM: cytochrome C oxidase subunit II; KEGG: aeh:Mlg_0293 cytochrome C oxidase, subunit II YP_003099167.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gsu:GSU3116 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003099168.1 KEGG: mno:Mnod_5575 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_003099169.1 KEGG: rpc:RPC_3025 two component transcriptional regulator YP_003099171.1 PFAM: cytochrome C oxidase subunit III; KEGG: nar:Saro_0918 cytochrome C oxidase, subunit III YP_003099172.1 PFAM: cytochrome C class I; KEGG: pne:Pnec_1360 cytochrome C oxidase, cbb3- type, subunit III YP_003099173.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mpt:Mpe_A0364 Rieske iron-sulfur protein YP_003099174.1 PFAM: Cytochrome b/b6 domain; KEGG: hha:Hhal_2108 cytochrome b/b6, N-terminal domain YP_003099175.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: dps:DP0751 transcription regulator YP_003099176.1 contains 3'-5'exonuclease domain YP_003099177.1 PFAM: protein of unknown function DUF901; KEGG: ank:AnaeK_0136 methyltransferase type 11 YP_003099178.1 PFAM: NLP/P60 protein; KEGG: dvu:DVU1392 NLP/P60 family protein YP_003099179.1 KEGG: ppd:Ppro_1566 hypothetical protein YP_003099180.1 PFAM: glycosyl transferase group 1; KEGG: acr:Acry_1803 glycosyl transferase, group 1 YP_003099181.1 PFAM: AMP-dependent synthetase and ligase; KEGG: acp:A2cp1_1619 AMP-dependent synthetase and ligase YP_003099183.1 PFAM: metallophosphoesterase; KEGG: sit:TM1040_3062 metallophosphoesterase YP_003099184.1 PFAM: cyclase/dehydrase; KEGG: acp:A2cp1_2307 cyclase/dehydrase YP_003099185.1 PFAM: anion-transporting ATPase; KEGG: bcz:BCZK0288 arsenite-transporting ATPase YP_003099186.1 KEGG: scl:sce1096 cell wall surface anchor family protein YP_003099187.1 PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase YP_003099188.1 PFAM: ATP-binding region ATPase domain protein; KEGG: predicted gene, 100042292 YP_003099189.1 KEGG: EP2 procyclin YP_003099190.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: phospholipid/glycerol acyltransferase YP_003099191.1 KEGG: reu:Reut_C6145 hypothetical protein YP_003099192.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis YP_003099193.1 KEGG: rce:RC1_0952 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_003099194.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: bha:BH2504 serine/threonine protein kinase YP_003099196.1 KEGG: met:M446_4899 hypothetical protein YP_003099197.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0895 phytoene desaturase YP_003099198.1 PFAM: polyprenyl synthetase; KEGG: scl:sce4204 geranyltranstransferase YP_003099199.1 KEGG: acr:Acry_0219 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003099200.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: ade:Adeh_3128 alkylhydroperoxidase AhpD core YP_003099202.1 PFAM: protein of unknown function DUF885; KEGG: scl:sce1630 hypothetical protein YP_003099204.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bce:BC2347 acetyltransferase YP_003099205.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bur:Bcep18194_A6310 YbaK/prolyl-tRNA synthetase like protein YP_003099206.1 PFAM: protein of unknown function DUF1503 YP_003099207.1 KEGG: vsp:VS_1778 hypothetical protein YP_003099208.1 KEGG: rle:RL3033 hypothetical protein YP_003099209.1 PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: gme:Gmet_0062 GntR family transcriptional regulator YP_003099210.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate YP_003099211.1 PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; ATPase AAA; KEGG: scl:sce3970 ATP-dependent helicase YP_003099213.1 PFAM: Heat shock protein 70; KEGG: hha:Hhal_0145 heat shock protein 70 YP_003099214.1 PFAM: major facilitator superfamily MFS_1; KEGG: bca:BCE_1913 major facilitator superfamily protein YP_003099217.1 KEGG: bha:BH2383 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_003099218.1 PFAM: regulatory protein RecX; KEGG: scl:sce0207 hypothetical protein YP_003099219.1 KEGG: bsu:BSU25740 hypothetical protein YP_003099220.1 KEGG: sil:SPO3031 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_003099221.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_003099223.1 KEGG: aba:Acid345_1383 integral membrane protein YP_003099224.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_003099225.1 catalyzes the fumarate and succinate interconversion; fumarate reductase is used under anaerobic conditions with glucose or glycerol as carbon source YP_003099226.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: predicted protein; K05521 ADP- ribosylglycohydrolase YP_003099228.1 catalyzes the reduction of ribonucleotides to deoxyribonucleotides; the rate-limiting step in dNTP synthesis YP_003099229.1 PFAM: ATP-cone domain protein; KEGG: mxa:MXAN_4765 hypothetical protein YP_003099230.1 PFAM: peptidoglycan-binding LysM; KEGG: bpa:BPP0017 hypothetical protein YP_003099231.1 KEGG: bha:BH2356 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_003099232.1 KEGG: scl:sce0154 hypothetical protein YP_003099233.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: GTP-binding family protein; K03665 GTP- binding protein HflX YP_003099234.1 PFAM: regulatory protein ArsR YP_003099235.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_2815 major facilitator transporter YP_003099236.1 KEGG: ade:Adeh_0570 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003099237.1 KEGG: bha:BH2366 tRNA delta(2)- isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003099238.1 KEGG: ade:Adeh_1392 flagellar biosynthesis/type III secretory pathway protein-like YP_003099239.1 PFAM: protein of unknown function DUF349; KEGG: pha:PSHAa1895 hypothetical protein YP_003099240.1 KEGG: hypothetical protein YP_003099241.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_003099242.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: tmz:Tmz1t_0431 TRAP transporter solute receptor, TAXI family YP_003099243.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pfl:PFL_3853 sensor histidine kinase YP_003099244.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: tbd:Tbd_2791 two component transcriptional regulator YP_003099245.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pde:Pden_5082 ABC transporter YP_003099246.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bce:BC0640 glutamine-binding protein YP_003099247.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bca:BCE_0709 amino acid ABC transporter, permease protein YP_003099248.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aav:Aave_3754 polar amino acid ABC transporter, inner membrane subunit YP_003099249.1 KEGG: psb:Psyr_0113 hypothetical protein YP_003099251.1 PFAM: protein of unknown function DUF1470; KEGG: xau:Xaut_0954 hypothetical protein YP_003099252.1 KEGG: pde:Pden_0168 hypothetical protein YP_003099253.1 KEGG: sus:Acid_4767 hypothetical protein YP_003099254.1 PFAM: endonuclease V; KEGG: sde:Sde_3689 endonuclease V YP_003099255.1 PFAM: glycoside hydrolase family 4; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sus:Acid_1925 glycoside hydrolase family protein YP_003099256.1 catalyzes the formation of inosine from adenosine YP_003099257.1 catalyzes the removal of N-terminal dipeptides when proline is the penultimate residue YP_003099258.1 KEGG: afw:Anae109_2566 H+transporting two-sector ATPase C (AC39) subunit YP_003099259.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: ade:Adeh_0114 peptidase S9, prolyl oligopeptidase YP_003099260.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: bha:BH1108 UDP-glucose 4-epimerase YP_003099261.1 TIGRFAM: galactokinase; PFAM: GHMP kinase domain protein; GHMP kinase; KEGG: scl:sce2225 hypothetical protein YP_003099262.1 PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; KEGG: sus:Acid_2178 DtxR family iron dependent repressor YP_003099263.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: tbd:Tbd_2489 3-mercaptopyruvate sulfurtransferase YP_003099264.1 KEGG: scl:sce4324 hypothetical protein YP_003099265.1 PFAM: histone deacetylase superfamily; KEGG: bha:BH3237 acetoin dehydrogenase YP_003099266.1 PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; KEGG: mgm:Mmc1_1098 CoA-binding domain protein YP_003099267.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) YP_003099268.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH3323 GntR family transcriptional regulator YP_003099270.1 KEGG: aba:Acid345_3970 hypothetical protein YP_003099271.1 KEGG: gbm:Gbem_2014 secreted protein YP_003099272.1 PFAM: protein of unknown function UPF0027; KEGG: scl:sce1307 hypothetical protein YP_003099273.1 PFAM: ABC transporter; KEGG: aeh:Mlg_2716 ABC transporter YP_003099274.1 KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003099275.1 PFAM: GCN5-related N-acetyltransferase; KEGG: smt:Smal_2582 GCN5-related N- acetyltransferase YP_003099277.1 PFAM: protein of unknown function DUF397 YP_003099278.1 KEGG: ade:Adeh_2732 heat repeat-containing PBS lyase YP_003099280.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_003099281.1 PFAM: Aldehyde Dehydrogenase; KEGG: ppw:PputW619_1998 aldehyde dehydrogenase YP_003099282.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; KEGG: pst:PSPTO_1053 hypothetical protein YP_003099283.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet4676 IclR family transcriptional regulator YP_003099284.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate YP_003099285.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: hypothetical protein; K01706 glucarate dehydratase YP_003099286.1 KEGG: rle:pRL100423 hypothetical protein YP_003099288.1 KEGG: hypothetical protein YP_003099289.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: mxa:MXAN_3162 fumarate hydratase, class I YP_003099290.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma factors in this cluster are active during stationary phase YP_003099291.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_003099292.1 PFAM: methyltransferase small; KEGG: sus:Acid_0229 methyltransferase small YP_003099293.1 KEGG: bha:BH1072 hypothetical protein YP_003099295.1 PFAM: PfkB domain protein; KEGG: oan:Oant_2477 PfkB domain protein YP_003099296.1 PFAM: Indigoidine synthase A family protein; KEGG: swd:Swoo_1446 indigoidine synthase A family protein YP_003099298.1 PFAM: ribonuclease BN; KEGG: ppu:PP_4560 ribonuclease BN YP_003099299.1 PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: sde:Sde_1925 GGDEF family protein YP_003099300.1 KEGG: scl:sce6008 xylose binding protein transport system YP_003099301.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acr:Acry_1972 ABC transporter YP_003099302.1 PFAM: inner-membrane translocator; KEGG: xylH; ABC transporter membrane spanning protein (xylose) YP_003099303.1 PFAM: ROK family protein; KEGG: bha:BH2758 transcriptional repressor of the xylose operon YP_003099305.1 KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit YP_003099306.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released YP_003099307.1 PFAM: ROK family protein; KEGG: asa:ASA_3376 ROK family protein YP_003099308.1 PFAM: inositol monophosphatase; KEGG: noc:Noc_0719 inositol-1(or 4)-monophosphatase YP_003099312.1 KEGG: eli:ELI_10525 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003099314.1 KEGG: mlo:mlr7232 hypothetical protein YP_003099315.1 PFAM: nucleic acid binding OB-fold tRNA/helicase- type YP_003099317.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rru:Rru_A1681 potassium transporter peripheral membrane component YP_003099318.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: asa:ASA_4143 potassium transporter peripheral membrane component YP_003099319.1 KEGG: bcb:BCB4264_A1880 hypothetical protein YP_003099320.1 PFAM: deoxyribonuclease/rho motif-related TRAM; (uracil-5)-methyltransferase; KEGG: sus:Acid_5841 23S rRNA (uracil-5-)- methyltransferase RumA YP_003099321.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_003099322.1 PFAM: hypothetical protein; KEGG: bja:bll5629 hypothetical protein YP_003099323.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mca:MCA2330 DNA-binding response regulator YP_003099324.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase YP_003099326.1 KEGG: scl:sce7642 hypothetical protein YP_003099327.1 PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: azo:azo2136 hypothetical protein YP_003099329.1 KEGG: nha:Nham_3622 OmpA/MotB YP_003099333.1 KEGG: vvy:VV1763 hypothetical protein YP_003099334.1 PFAM: protein of unknown function DUF72; KEGG: xac:XAC2920 hypothetical protein YP_003099335.1 TIGRFAM: prevent-host-death family protein; KEGG: rlt:Rleg2_2735 prevent-host-death family protein YP_003099336.1 PFAM: PilT protein domain protein; KEGG: bcm:Bcenmc03_4257 PilT domain-containing protein YP_003099338.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ank:AnaeK_0030 NAD-dependent epimerase/dehydratase YP_003099339.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sfu:Sfum_1404 3-hydroxyacyl-CoA dehydrogenase, NAD-binding YP_003099340.1 KEGG: sfu:Sfum_1403 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003099341.1 KEGG: scl:sce6782 hypothetical protein YP_003099342.1 KEGG: scl:sce6783 hypothetical protein YP_003099343.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: smt:Smal_2399 transcriptional regulator, MerR family YP_003099344.1 PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; KEGG: ade:Adeh_1602 3'-5' exonuclease YP_003099345.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mfa:Mfla_0447 two component LuxR family transcriptional regulator YP_003099346.1 PFAM: peptidase M19 renal dipeptidase; KEGG: eli:ELI_09665 dipeptidase YP_003099348.1 KEGG: scl:sce8628 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: uroporphyrinogen decarboxylase (URO-D) YP_003099349.1 KEGG: aba:Acid345_0695 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003099350.1 PFAM: Chlorite dismutase; KEGG: bha:BH3825 heme peroxidase YP_003099351.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: shn:Shewana3_1740 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003099354.1 PFAM: protein of unknown function DUF692; xylose isomerase; KEGG: scl:sce1885 hypothetical protein YP_003099355.1 KEGG: hypothetical protein YP_003099356.1 KEGG: scl:sce6895 hypothetical protein YP_003099357.1 KEGG: erythrocyte membrane protein 1 (PfEMP1) YP_003099358.1 KEGG: hypothetical protein YP_003099359.1 KEGG: met:M446_2019 hypothetical protein YP_003099360.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: methionine sulfoxide reductase B; KEGG: methionine-R-sulfoxide reductase SelR YP_003099362.1 PFAM: L-asparaginase II; KEGG: sil:SPO3349 L-asparaginase YP_003099363.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pde:Pden_4617 transcriptional regulator, GntR family YP_003099364.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bja:blr3304 acyl-CoA dehydrogenase YP_003099365.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: gur:Gura_3313 acyl-CoA dehydrogenase domain- containing protein YP_003099366.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: afw:Anae109_2830 DNA primase small subunit YP_003099369.1 KEGG: bpy:Bphyt_2395 haemagluttinin domain protein YP_003099371.1 KEGG: mpt:Mpe_A1758 hypothetical protein YP_003099372.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: hypothetical protein YP_003099373.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mrd:Mrad2831_3085 hypothetical protein YP_003099374.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth YP_003099375.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: jan:Jann_3421 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_003099376.1 PFAM: AFG1-family ATPase; KEGG: shn:Shewana3_0691 AFG1 family ATPase YP_003099378.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ade:Adeh_0830 ABC transporter, duplicated ATPase subunits YP_003099379.1 KEGG: nar:Saro_1805 hypothetical protein YP_003099380.1 KEGG: sus:Acid_6335 hypothetical protein YP_003099381.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: gbe:GbCGDNIH1_1948 ornithine--oxo-acid transaminase YP_003099382.1 KEGG: mrd:Mrad2831_2396 hypothetical protein YP_003099383.1 PFAM: phosphoglycerate mutase; KEGG: xca:xccb100_3271 hypothetical protein YP_003099384.1 KEGG: mxa:MXAN_0652 hypothetical protein YP_003099385.1 KEGG: ank:AnaeK_1723 hypothetical protein YP_003099386.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bcz:BCZK4892 LytR family transcriptional regulator YP_003099388.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: hypothetical protein YP_003099390.1 SecA2; functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond to SecA2; which is non-essential and seems to play a role in secretion of a subset of proteins YP_003099391.1 KEGG: cak:Caul_3403 hypothetical protein YP_003099392.1 PFAM: SpoOM family protein; Arrestin-like-like; KEGG: shm:Shewmr7_2729 SpoOM family protein YP_003099393.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: pfo:Pfl01_4696 acyl-CoA dehydrogenase-like YP_003099394.1 KEGG: dac:Daci_0764 hypothetical protein YP_003099395.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: dac:Daci_0766 von Willebrand factor type A YP_003099397.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: scl:sce4229 exonuclease YP_003099398.1 PFAM: regulatory protein TetR; KEGG: bph:Bphy_4824 TetR family transcriptional regulator YP_003099401.1 PFAM: MaoC domain protein dehydratase; KEGG: pol:Bpro_1240 MaoC-like dehydratase YP_003099402.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB0613 short chain dehydrogenase YP_003099403.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pau:PA14_43180 short chain dehydrogenase YP_003099404.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: qor; quinone oxidoreductase protein YP_003099405.1 KEGG: mucin-associated surface protein (MASP) YP_003099406.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mno:Mnod_8803 peptidase S8 and S53 subtilisin kexin sedolisin YP_003099407.1 PFAM: sodium/hydrogen exchanger; KEGG: bcb:BCB4264_A4853 sodium/hydrogen exchanger family protein YP_003099408.1 PFAM: TrkA-C domain protein; KEGG: bcz:BCZK4776 potassium channel, C-terminus YP_003099409.1 KEGG: gur:Gura_1465 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_003099410.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: bha:BH1635 hypothetical protein YP_003099411.1 synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_003099412.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003099413.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003099414.1 PFAM: integrase family protein; KEGG: scl:sce4427 site-specific recombinase YP_003099422.1 PFAM: protein of unknown function DUF397 YP_003099424.1 KEGG: bcr:BCAH187_A3991 phage minor structural protein, N-region YP_003099426.1 KEGG: mgm:Mmc1_2162 hypothetical protein YP_003099433.1 KEGG: bpy:Bphyt_0835 hypothetical protein YP_003099434.1 PFAM: lipolytic protein G-D-S-L family; KEGG: similar to hCG2041257 YP_003099436.1 KEGG: mno:Mnod_2529 hypothetical protein YP_003099440.1 KEGG: bcr:BCAH187_A3735 hypothetical protein YP_003099441.1 KEGG: azc:AZC_1123 hypothetical protein YP_003099442.1 KEGG: nwi:Nwi_1556 hypothetical protein YP_003099445.1 KEGG: ade:Adeh_2705 response regulator receiver YP_003099448.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: protein of unknown function DUF264 YP_003099451.1 KEGG: seg:SG1189 predicted phage regulatory protein YP_003099453.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_003099454.1 PFAM: NUDIX hydrolase; KEGG: dar:Daro_0963 NUDIX hydrolase YP_003099456.1 PFAM: MHYT domain protein; KEGG: sde:Sde_0524 integral membrane sensor protein YP_003099457.1 PFAM: ribonuclease H; KEGG: bte:BTH_I2790 RNase H YP_003099458.1 KEGG: hypothetical protein YP_003099459.1 KEGG: bcj:BCAM2418 haemagglutinin-related autotransporter protein YP_003099460.1 KEGG: alpha-galactosidase, / melibiase, / alpha-D-galactoside galactohydrolase, ; K07407 alpha-galactosidase; PFAM: Ricin B lectin; glycoside hydrolase clan GH- D; SMART: Ricin B lectin YP_003099461.1 SMART: helix-turn-helix domain protein; KEGG: scl:sce8759 hypothetical protein YP_003099463.1 KEGG: msl:Msil_3349 hypothetical protein YP_003099464.1 KEGG: mag:amb3212 periplasmic protein TonB, links inner and outer membranes YP_003099465.1 KEGG: rso:RSc2037 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter; SMART: ATPase AAA YP_003099466.1 KEGG: scl:sce5582 ABC transporter ATP- binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter; SMART: ATPase AAA YP_003099467.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: scl:sce5581 branched-chain amino acid ABC transporter, permease protein YP_003099468.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: scl:sce5580 branched-chain amino acid ABC transporter, permease protein YP_003099469.1 TIGRFAM: urea ABC transporter, urea binding protein; PFAM: Extracellular ligand-binding receptor; KEGG: scl:sce5579 branched-chain amino acid transport system substrate-binding protein YP_003099470.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: bha:BH0583 hypothetical protein YP_003099471.1 KEGG: sde:Sde_0054 adenylyl cyclase class- 3/4/guanylyl cyclase YP_003099472.1 PFAM: ROK family protein; KEGG: rlt:Rleg2_2328 ROK family protein YP_003099473.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce8424 ABC-type dipeptide transport system, periplasmic component YP_003099474.1 KEGG: scl:sce4298 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003099475.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4301 peptide ABC transporter, permease protein YP_003099476.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sit:TM1040_2743 binding-protein-dependent transport systems inner membrane component YP_003099477.1 KEGG: scl:sce4299 peptide ABC transporter, ATP- binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_003099478.1 KEGG: rfr:Rfer_1102 beta-glucosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003099479.1 KEGG: hypothetical protein LOC758923 YP_003099480.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cti:RALTA_A2171 serine/threonine protein phosphatase, P2C family YP_003099483.1 PFAM: TspO/MBR family protein; KEGG: xca:xccb100_2086 peripheral-type benzodiazepine receptor YP_003099484.1 PFAM: protein of unknown function DUF664 YP_003099485.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration YP_003099486.1 KEGG: ade:Adeh_0952 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003099487.1 KEGG: tgr:Tgr7_2236 crossover junction endodeoxyribonuclease; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003099488.1 KEGG: dvm:DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003099489.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mag:amb2515 preprotein translocase subunit YajC YP_003099490.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: oca:OCAR_6254 protein-export membrane protein SecD YP_003099491.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: cbc:CbuK_1009 protein translocase subunit YP_003099492.1 PFAM: phosphoribosyltransferase; KEGG: scl:sce2983 adenine phosphoribosyltransferase YP_003099493.1 KEGG: bha:BH1242 GTP pyrophosphokinase (stringent response); TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003099494.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: hypothetical protein; K01802 peptidylprolyl isomerase YP_003099495.1 PFAM: beta-lactamase domain protein; KEGG: glo:Glov_3342 beta-lactamase domain protein YP_003099496.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_003099499.1 KEGG: mxa:MXAN_2295 hypothetical protein YP_003099500.1 PFAM: protein of unknown function DUF1304; KEGG: atc:AGR_L_3168 hypothetical protein YP_003099501.1 PFAM: YibE/F family protein; KEGG: mgm:Mmc1_2300 YibE/F family protein YP_003099503.1 KEGG: acp:A2cp1_3441 hypothetical protein YP_003099504.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_0079 transcriptional regulator, TetR family YP_003099505.1 KEGG: dal:Dalk_2661 wyosine base formation YP_003099506.1 PFAM: carboxyl transferase; KEGG: ppu:PP_4065 propionyl-CoA carboxylase YP_003099507.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; protein of unknown function DUF201; biotin/lipoyl attachment domain- containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: bra:BRADO6875 biotin carboxylase YP_003099508.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bxe:Bxe_C0513 acyl-CoA dehydrogenase YP_003099509.1 KEGG: ccs:CCNA_00655 hypothetical protein YP_003099511.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003099512.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: swd:Swoo_2373 peptidase S8 and S53 subtilisin kexin sedolisin YP_003099513.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes YP_003099514.1 KEGG: lpp:plpp0130 hypothetical protein YP_003099515.1 PFAM: glycosyl transferase family 2; GtrA family protein; KEGG: ppd:Ppro_2693 glycosyl transferase family protein YP_003099516.1 PFAM: glycosyl transferase family 39; KEGG: bsu:BSU12880 hypothetical protein YP_003099517.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sus:Acid_6896 heavy metal sensor signal transduction histidine kinase YP_003099518.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bat:BAS2056 DNA-binding response regulator YP_003099519.1 KEGG: bce:BC0440 surface protein YP_003099520.1 PFAM: copper resistance protein CopC; KEGG: rpc:RPC_2426 copper resistance D YP_003099521.1 PFAM: uracil-DNA glycosylase; KEGG: scl:sce5098 G/U mismatch-specific DNA glycosylase YP_003099522.1 PFAM: protein of unknown function DUF742; KEGG: hypothetical protein YP_003099523.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: dps:DP2177 hypothetical protein YP_003099524.1 KEGG: ank:AnaeK_2858 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003099525.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: ret:RHE_CH01364 oxidoreductase protein YP_003099526.1 KEGG: cvi:CV_4013 dTDP-6-deoxy-D-glucose-3,5 epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003099527.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: rlt:Rleg2_6416 NAD-dependent epimerase/dehydratase YP_003099528.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mrd:Mrad2831_4616 DegT/DnrJ/EryC1/StrS aminotransferase YP_003099529.1 KEGG: rle:pRL90161 hypothetical protein YP_003099530.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: acetyltransferase YP_003099531.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_1081 DegT/DnrJ/EryC1/StrS aminotransferase YP_003099532.1 KEGG: xcv:XCV3714 bifunctional isomerase / acetyl transferase YP_003099533.1 PFAM: O-antigen polymerase; KEGG: mxa:MXAN_3026 O-antigen polymerase family protein YP_003099534.1 KEGG: dvu:DVU0508 translation initiation factor IF- 2 YP_003099535.1 KEGG: sus:Acid_4999 peptidase S9B dipeptidylpeptidase IV subunit YP_003099537.1 PFAM: transposase IS4 family protein; KEGG: rme:Rmet_4154 transposase, IS4 family YP_003099538.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nar:Saro_3542 short-chain dehydrogenase/reductase SDR YP_003099539.1 KEGG: smd:Smed_4803 glycosyl transferase group 1 YP_003099540.1 PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: pol:Bpro_1890 polysaccharide biosynthesis protein YP_003099541.1 PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4802 glycosyl transferase family 2 YP_003099542.1 KEGG: pat:Patl_2044 hypothetical protein YP_003099543.1 KEGG: smd:Smed_4798 hypothetical protein YP_003099544.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: bca:BCE_2353 triple helix repeat-containing COllagen YP_003099545.1 PFAM: major facilitator superfamily MFS_1; KEGG: rce:RC1_3626 major facilitator superfamily transport protein YP_003099546.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: lch:Lcho_2341 WecB/TagA/CpsF family glycosyl transferase YP_003099547.1 PFAM: glycosyl transferase family 2; KEGG: ank:AnaeK_2727 hypothetical protein YP_003099548.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; protein of unknown function RIO1; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: tbd:Tbd_1700 serine/threonine protein kinase YP_003099549.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003099550.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_2630 enoyl-CoA hydratase YP_003099551.1 PFAM: GCN5-related N-acetyltransferase; KEGG: met:M446_1745 MarR family transcriptional regulator YP_003099552.1 PFAM: YCII-related; regulatory protein LuxR; Sigma- 70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: reu:Reut_B5221 YCII-related YP_003099553.1 PFAM: thioesterase superfamily protein; KEGG: acp:A2cp1_3885 thioesterase superfamily protein YP_003099555.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: scl:sce3770 phytoene dehydrogenase- related protein YP_003099556.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: bja:bll7280 hypothetical protein YP_003099557.1 PFAM: aldo/keto reductase; KEGG: rle:RL2983 aldo/keto reductase YP_003099558.1 KEGG: rfr:Rfer_1474 hypothetical protein YP_003099559.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nar:Saro_3457 enoyl-CoA hydratase/isomerase YP_003099560.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vei:Veis_4651 glyoxalase/bleomycin resistance protein/dioxygenase YP_003099562.1 KEGG: bmn:BMA10247_A2255 hypothetical protein YP_003099563.1 KEGG: SNF2 superfamily protein YP_003099564.1 PFAM: ribonuclease BN; KEGG: ppu:PP_4560 ribonuclease BN YP_003099565.1 KEGG: noc:Noc_1876 hypothetical protein YP_003099566.1 PFAM: YheO domain protein; aminotransferase class V; KEGG: mxa:MXAN_1570 aminotransferase, class V YP_003099567.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bac:BamMC406_6166 ABC transporter YP_003099568.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_2097 ABC transporter permease YP_003099569.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rle:RL0985 solute-binding component of ABC transporter YP_003099570.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: ank:AnaeK_2254 thioredoxin YP_003099571.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003099572.1 KEGG: bch:Bcen2424_1675 precorrin-6y C5,15- methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003099573.1 KEGG: bov:BOV_1262 precorrin-4 C11- methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003099574.1 KEGG: rru:Rru_A2988 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_003099575.1 TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: met:M446_2442 precorrin-3B C17- methyltransferase YP_003099576.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: pmy:Pmen_4572 precorrin-8X methylmutase YP_003099577.1 KEGG: bja:blr3264 hypothetical protein YP_003099578.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_003099579.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein) YP_003099580.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1925 sugar transport system (permease) YP_003099581.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH1926 sugar transport system (permease) YP_003099582.1 KEGG: hch:HCH_06907 beta-glucosidase/6-phospho-beta- glucosidase/beta-galactosidase; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_003099583.1 KEGG: aav:Aave_4199 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003099584.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: psp:PSPPH_B0015 prevent-host-death family protein YP_003099585.1 PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: cja:CJA_2477 endo-1,4-beta- glucanase/xyloglucanase, , gly74A YP_003099587.1 PFAM: hypothetical protein; SMART: helix-turn-helix domain protein; hypothetical protein; KEGG: scl:sce5991 protein kinase YP_003099588.1 PFAM: ROK family protein; KEGG: acr:Acry_0116 ROK family protein YP_003099589.1 catalyzes the interconversion of D-xylose to D-xylulose YP_003099590.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: pen:PSEEN1988 xylulokinase YP_003099592.1 KEGG: afw:Anae109_0147 hypothetical protein YP_003099594.1 PFAM: metallophosphoesterase; KEGG: mes:Meso_2768 metallophosphoesterase YP_003099595.1 PFAM: cyclase/dehydrase; KEGG: mfa:Mfla_0007 cyclase/dehydrase YP_003099596.1 PFAM: transcription activator effector binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU05170 hypothetical protein YP_003099597.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mrd:Mrad2831_6253 alcohol dehydrogenase YP_003099598.1 KEGG: azo:azo1781 hypothetical protein YP_003099599.1 PFAM: transcriptional regulator domain protein; KEGG: glo:Glov_0588 two component transcriptional regulator, winged helix family YP_003099601.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1009 sugar transport sugar binding protein YP_003099602.1 KEGG: sus:Acid_1791 amino acid transporter YP_003099603.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mex:Mext_0562 kojibiose phosphorylase YP_003099604.1 TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_2161 beta-phosphoglucomutase family hydrolase YP_003099605.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rsh:Rsph17029_3442 cyclic nucleotide- regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003099606.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mxa:MXAN_5617 transcriptional regulator, ArsR family YP_003099608.1 KEGG: PODXL2; podocalyxin-like 2 YP_003099609.1 KEGG: rpi:Rpic_3996 alanine-rich signal peptide protein YP_003099610.1 PFAM: transcription factor WhiB YP_003099611.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: scl:sce0579 MerR family transcriptional regulator YP_003099613.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: pde:Pden_0820 anti-sigma-factor antagonist YP_003099614.1 PFAM: NLP/P60 protein; KEGG: dvu:DVU1392 NLP/P60 family protein YP_003099615.1 KEGG: sit:TM1040_2323 hypothetical protein YP_003099616.1 PFAM: chitin-binding domain 3 protein; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: pag:PLES_44661 chitin-binding protein CbpD precursor YP_003099618.1 KEGG: yen:YE0107 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003099619.1 KEGG: aav:Aave_4199 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003099620.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: esa:ESA_02100 hypothetical protein YP_003099622.1 PFAM: acetyl xylan esterase; peptidase S15; KEGG: mlo:mlr6993 acetyl xylan esterase YP_003099624.1 PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: sde:Sde_0064 secreted beta- mannosidase YP_003099625.1 PFAM: cellulose-binding family II; lipolytic protein G-D-S-L family; SMART: cellulose-binding family II; KEGG: hypothetical protein YP_003099626.1 PFAM: YCII-related; KEGG: scl:sce5148 hypothetical protein YP_003099627.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: scl:sce5149 ECF subfamily RNA polymerase sigma-70 factor YP_003099628.1 PFAM: protein of unknown function DUF397 YP_003099629.1 SMART: helix-turn-helix domain protein YP_003099631.1 SMART: helix-turn-helix domain protein; KEGG: hypothetical protein YP_003099633.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: Foxred2; FAD-dependent oxidoreductase domain containing 2 YP_003099634.1 KEGG: pca:Pcar_0512 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase YP_003099635.1 KEGG: rsh:Rsph17029_3026 hypothetical protein YP_003099636.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bvi:Bcep1808_3829 LacI family transcription regulator YP_003099637.1 PFAM: pectate lyase/Amb allergen; pectinesterase; SMART: pectate lyase/Amb allergen; KEGG: bsu:BSU07560 pectate lyase YP_003099638.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_0187 binding-protein-dependent transport systems inner membrane component YP_003099639.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_2422 binding-protein-dependent transport systems inner membrane component YP_003099640.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL110364 substrate-binding component of ABC transporter YP_003099641.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: ent:Ent638_2707 mandelate racemase/muconate lactonizing protein YP_003099642.1 PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; Parallel beta- helix repeat; KEGG: pectate lyase YP_003099643.1 PFAM: ketopantoate reductase ApbA/PanE domain protein; KEGG: gdi:GDI0989 2-dehydropantoate 2- reductase YP_003099644.1 PFAM: Ricin B lectin; peptidase alpha-lytic pro domain; peptidase S1 and S6 chymotrypsin/Hap; SMART: Ricin B lectin; KEGG: mxa:MXAN_5466 peptidase, S1E (streptogrisin A) subfamily YP_003099645.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dde:Dde_3083 glyoxalase family protein YP_003099646.1 PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease protein YjfF YP_003099647.1 PFAM: inner-membrane translocator; KEGG: scl:sce3306 ribose/xylose/arabinose/galactoside ABC-type transporter permease YP_003099648.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bvi:Bcep1808_6551 ABC transporter YP_003099649.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rpi:Rpic_4095 periplasmic binding protein/LacI transcriptional regulator YP_003099650.1 KEGG: hypothetical protein YP_003099651.1 PFAM: alpha-L-arabinofuranosidase domain protein; carbohydrate-binding CenC domain protein; KEGG: ASD1; ASD1 (ALPHA-L-ARABINOFURANOSIDASE); hydrolase, acting on glycosyl bonds YP_003099652.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003099653.1 PFAM: protein of unknown function DUF1680; SMART: LamG domain protein jellyroll fold domain protein; KEGG: hypothetical protein YP_003099654.1 KEGG: scl:sce3317 HTH-type transcriptional repressor PurR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003099655.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate YP_003099656.1 catalyzes the formation of D-xylulose 5-phosphate from L-ribulose 5-phosphate YP_003099657.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism YP_003099658.1 KEGG: rle:RL3617 solute-binding component of ABC transporter YP_003099659.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH3441 L-arabinose ABC transporter ATP- binding protein YP_003099660.1 PFAM: inner-membrane translocator; KEGG: bha:BH3440 L-arabinose ABC transporter (permease) YP_003099662.1 PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: cja:CJA_3559 rhamnogalacturonan lyase, rgl11A YP_003099663.1 SMART: Parallel beta-helix repeat; KEGG: scl:sce5350 secreted protein YP_003099664.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rme:Rmet_5441 antibiotic biosynthesis monooxygenase YP_003099665.1 KEGG: aav:Aave_4199 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003099666.1 PFAM: alpha-L-arabinofuranosidase B; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003099667.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: sml:Smlt2180 hypothetical protein YP_003099668.1 KEGG: scl:sce2753 protein kinase YP_003099669.1 KEGG: dol:Dole_0415 filamentation induced by cAMP protein Fic YP_003099671.1 PFAM: endonuclease I; KEGG: bsu:BSU32540 hypothetical protein YP_003099672.1 KEGG: hypothetical protein LOC100078772 YP_003099673.1 PFAM: ATP-binding region ATPase domain protein; KEGG: vei:Veis_0031 multi-sensor signal transduction histidine kinase YP_003099675.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: azo:azo0569 DNA-binding response regulator YP_003099676.1 KEGG: YALI0F00990p YP_003099677.1 KEGG: hch:HCH_00912 phosphoribosylpyrophosphate synthetase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003099678.1 PFAM: hypothetical protein; KEGG: mrd:Mrad2831_1392 zinc finger SWIM domain- containing protein YP_003099679.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: bur:Bcep18194_B1557 VWA containing CoxE-like protein YP_003099680.1 KEGG: bur:Bcep18194_B1556 hypothetical protein YP_003099681.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: MoxR-like ATPase YP_003099682.1 KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003099683.1 KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003099684.1 KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003099685.1 PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet2351 glycosyltransferase YP_003099686.1 PFAM: OsmC family protein; KEGG: bch:Bcen2424_5605 OsmC family protein YP_003099687.1 KEGG: hypothetical protein YP_003099688.1 KEGG: nar:Saro_1805 hypothetical protein YP_003099689.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sme:SMc01159 oxidoreductase protein YP_003099690.1 PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bbt:BBta_0011 UDP-N-acetylglucosamine 1- carboxyvinyltransferase YP_003099693.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_003099694.1 PFAM: protein of unknown function DUF344; KEGG: tgr:Tgr7_0141 hypothetical protein YP_003099695.1 PFAM: transglycosylase-associated protein; KEGG: csa:Csal_2587 transglycosylase-associated protein YP_003099697.1 KEGG: hch:HCH_06998 hypothetical protein YP_003099698.1 KEGG: acp:A2cp1_0343 hypothetical protein YP_003099699.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: sal:Sala_2455 alcohol dehydrogenase GroES- like protein YP_003099700.1 PFAM: nitroreductase; KEGG: afw:Anae109_0827 hypothetical protein YP_003099701.1 PFAM: GAF domain protein; histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: scl:sce2236 two-component system sensor kinase YP_003099704.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcy:Bcer98_0214 two component LuxR family transcriptional regulator YP_003099705.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: pau:PA14_40540 CBS domain-containing protein YP_003099706.1 PFAM: UspA domain protein; KEGG: hha:Hhal_2190 UspA domain protein YP_003099707.1 PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; KEGG: mgm:Mmc1_1098 CoA-binding domain protein YP_003099708.1 KEGG: aeh:Mlg_0315 UspA domain-containing protein YP_003099709.1 KEGG: bbt:BBta_6725 hypothetical protein YP_003099711.1 PFAM: nitroreductase; KEGG: rce:RC1_3281 hypothetical protein YP_003099712.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 phosphoketolase YP_003099713.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: nwi:Nwi_1948 acetate kinase YP_003099714.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce5315 protein kinase YP_003099716.1 PFAM: acyltransferase 3; KEGG: mes:Meso_0485 acyltransferase 3 YP_003099717.1 PFAM: glycosyl transferase family 2; KEGG: ppd:Ppro_2693 glycosyl transferase family protein YP_003099718.1 PFAM: glycosyl transferase family 39; KEGG: bsu:BSU40490 hypothetical protein YP_003099720.1 KEGG: pen:PSEEN1955 ribose operon repressor RbsR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003099721.1 PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter; K10188 lactose/L- arabinose transport system substrate-binding protein YP_003099722.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K10189 lactose/L- arabinose transport system permease protein YP_003099723.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sml:Smlt3250 sugar transporter, permease protein YP_003099724.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: vei:Veis_3457 alpha-N-arabinofuranosidase YP_003099725.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: glo:Glov_0487 NAD-dependent epimerase/dehydratase YP_003099726.1 PFAM: cyclase/dehydrase YP_003099727.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF YP_003099728.1 PFAM: UspA domain protein; KEGG: afw:Anae109_3830 universal stress family protein YP_003099729.1 PFAM: UspA domain protein; KEGG: hha:Hhal_2190 UspA domain protein YP_003099731.1 PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xcv:XCV4086 LuxR family two-component response regulator YP_003099732.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: ccs:CCNA_01207 two-component sensor histidine kinase YP_003099733.1 PFAM: ABC transporter; KEGG: bca:BCE_5484 ABC transporter, permease protein YP_003099734.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein YP_003099735.1 KEGG: scl:sce6219 hypothetical protein YP_003099737.1 PFAM: protein of unknown function DUF397 YP_003099738.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cko:CKO_01491 hypothetical protein YP_003099739.1 KEGG: chromosome segregation protein SMC; K03529 chromosome segregation protein YP_003099740.1 KEGG: bpt:Bpet3209 spermidine synthase (putrescine aminopropyltransferase) YP_003099741.1 KEGG: hypothetical protein YP_003099742.1 PFAM: ABC transporter; TOBE domain protein; SMART: ATPase AAA; KEGG: bac:BamMC406_1610 ABC transporter YP_003099743.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce1134 ABC-type molybdate transporter, permease protein YP_003099744.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce1135 ABC-type molybdate transporter, substrate-binding protein YP_003099745.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: TOBE domain protein; regulatory protein MerR; KEGG: aba:Acid345_1548 molybdenum-pterin binding protein YP_003099746.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: pst:PSPTO_2646 TetR family transcriptional regulator YP_003099747.1 PFAM: major facilitator superfamily MFS_1; KEGG: smt:Smal_2153 major facilitator superfamily MFS_1 YP_003099748.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: hypothetical protein YP_003099749.1 PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_0205 osmosensitive K+ channel signal transduction histidine kinase YP_003099750.1 KEGG: hypothetical protein YP_003099751.1 PFAM: PAS fold-3 domain protein; chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; PAC repeat- containing protein; KEGG: psp:PSPPH_4230 methyl-accepting chemotaxis protein YP_003099752.1 KEGG: rso:RS05496 oxidoreductase protein YP_003099753.1 PFAM: regulatory protein TetR; KEGG: acr:Acry_0512 TetR family transcriptional regulator YP_003099754.1 PFAM: protein of unknown function DUF1271; KEGG: bpy:Bphyt_4246 hypothetical protein YP_003099755.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003099756.1 PFAM: Silent information regulator protein Sir2; KEGG: scl:sce3874 hypothetical protein YP_003099758.1 KEGG: mxa:MXAN_5876 hypothetical protein YP_003099760.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bra:BRADO0101 organic hydroperoxide resistance transcriptional regulator YP_003099762.1 PFAM: major facilitator superfamily MFS_1; KEGG: jan:Jann_0419 major facilitator transporter YP_003099763.1 KEGG: pmy:Pmen_4204 hypothetical protein YP_003099764.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: acp:A2cp1_3940 hypothetical protein YP_003099765.1 PFAM: alpha-L-arabinofuranosidase B; glycosyl hydrolase family 32 domain protein; KEGG: scl:sce1247 hypothetical protein YP_003099766.1 PFAM: regulatory protein TetR; KEGG: aha:AHA_0553 TetR family transcriptional regulator YP_003099767.1 PFAM: saccharopine dehydrogenase; KEGG: bha:BH3388 hypothetical protein YP_003099768.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bja:bll4939 methyltransferase YP_003099769.1 PFAM: glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein; KEGG: bha:BH1061 alpha-glucuronidase YP_003099770.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase YP_003099771.1 KEGG: afw:Anae109_4026 glycosyltransferase 36 YP_003099772.1 PFAM: glycoside hydrolase family 39; KEGG: bha:BH1068 beta-xylosidase YP_003099773.1 PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_3560 AlgQ1, multiple sugar transport system substrate-binding protein YP_003099774.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU07120 transmembrane lipoprotein YP_003099775.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_3564 AlgM1, multiple sugar transport system permease protein YP_003099776.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: vei:Veis_0942 glycoside hydrolase, family 3 domain protein YP_003099777.1 KEGG: rpi:Rpic_0879 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003099778.1 PFAM: acetyl xylan esterase; KEGG: mlo:mlr6993 acetyl xylan esterase YP_003099779.1 PFAM: Clp domain protein; KEGG: ATP-dependent clp protease ATP-binding subunit YP_003099780.1 KEGG: ank:AnaeK_3385 hypothetical protein YP_003099781.1 KEGG: scl:sce0848 protein kinase YP_003099782.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein YP_003099784.1 PFAM: aminoglycoside phosphotransferase; KEGG: sme:SMc02722 aminoglycoside 3'- phosphotransferase protein YP_003099785.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hypothetical protein YP_003099786.1 KEGG: hypothetical protein YP_003099787.1 PFAM: protein of unknown function DUF1469; KEGG: gbm:Gbem_1384 protein of unknown function DUF1469 YP_003099788.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pfo:Pfl01_4350 ribonuclease BN YP_003099789.1 PFAM: alcohol dehydrogenase GroES domain protein; KEGG: scl:sce5062 hypothetical protein YP_003099790.1 PFAM: aminotransferase class-III; KEGG: sat:SYN_01215 4-aminobutyrate aminotransferase YP_003099791.1 PFAM: glycosyl transferase family 20; KEGG: ank:AnaeK_0483 HAD-superfamily hydrolase, subfamily IIB YP_003099792.1 PFAM: dTDP-4-dehydrorhamnose reductase; NAD- dependent epimerase/dehydratase; KEGG: acp:A2cp1_4446 dTDP-4-dehydrorhamnose reductase YP_003099793.1 PFAM: major facilitator superfamily MFS_1; KEGG: major facilitator superfamily MFS_1 precursor YP_003099794.1 PFAM: 3-dehydroquinate synthase; KEGG: reh:H16_A3434 3-dehydroquinate synthase YP_003099795.1 PFAM: xylose isomerase; ATPase BadF/BadG/BcrA/BcrD type; KEGG: vei:Veis_3268 xylose isomerase domain protein TIM barrel YP_003099796.1 PFAM: Nucleotidyl transferase; KEGG: cja:CJA_3254 glucose-1-phosphate adenylyltransferase YP_003099797.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: lch:Lcho_1958 glyoxalase/bleomycin resistance protein/dioxygenase YP_003099798.1 PFAM: regulatory protein TetR; KEGG: rle:RL2982 TetR family transcriptional regulator YP_003099799.1 KEGG: rce:RC1_2688 malate synthase A; TIGRFAM: malate synthase A; PFAM: malate synthase YP_003099800.1 TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: sml:Smlt0232 isocitrate lyase YP_003099801.1 PFAM: protein of unknown function DUF955; helix- turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rpt:Rpal_2644 transcriptional regulator, XRE family YP_003099802.1 KEGG: rec:RHECIAT_PC0000040 hypothetical protein YP_003099803.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003099804.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003099805.1 KEGG: sfu:Sfum_3154 hypothetical protein YP_003099806.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003099807.1 PFAM: monooxygenase FAD-binding; KEGG: scl:sce4973 monooxygenase YP_003099809.1 PFAM: sporulation and cell division protein SsgA YP_003099810.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpi:Rpic_2575 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003099811.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003099812.1 KEGG: swp:swp_2864 hypothetical protein swp_2864 YP_003099813.1 KEGG: bvi:Bcep1808_7197 integrase catalytic subunit YP_003099814.1 KEGG: bid:Bind_1964 non-specific serine/threonine protein kinase YP_003099815.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_003099816.1 KEGG: rec:RHECIAT_PB0000363 hypothetical protein YP_003099817.1 PFAM: tryptophan 23-dioxygenase; KEGG: cak:Caul_5244 tryptophan 23-dioxygenase YP_003099818.1 PFAM: aminotransferase class V; KEGG: swi:Swit_0679 kynureninase YP_003099819.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: bpd:BURPS668_0791 biotin carboxylase YP_003099820.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: rpc:RPC_4715 major facilitator transporter YP_003099821.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bmb:BruAb2_0285 amino acid ABC transporter, periplasmic amino acid-binding protein YP_003099822.1 PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_C7638 amino acid transporter YP_003099824.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce7656 carbohydrate ABC transporter YP_003099825.1 PFAM: peptidase S24 and S26 domain protein; KEGG: dal:Dalk_4340 signal peptidase I YP_003099826.1 SMART: helix-turn-helix domain protein YP_003099827.1 PFAM: integral membrane protein TerC; KEGG: ade:Adeh_2303 integral membrane protein TerC YP_003099828.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mex:Mext_0724 monooxygenase FAD-binding YP_003099829.1 KEGG: bcb:BCB4264_A2138 respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: nitrate reductase gamma subunit YP_003099830.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase delta subunit; KEGG: bsu:BSU37260 nitrate reductase (protein J) YP_003099831.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: bsu:BSU37270 nitrate reductase (beta subunit) YP_003099832.1 KEGG: bcb:BCB4264_A2135 respiratory nitrate reductase, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region YP_003099833.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_2929 major facilitator transporter YP_003099834.1 KEGG: bcm:Bcenmc03_1697 hypothetical protein YP_003099838.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis YP_003099839.1 PFAM: alpha-L-rhamnosidase; alpha-L-rhamnosidase domain protein; KEGG: hypothetical protein YP_003099840.1 PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: cak:Caul_2415 alpha-N-arabinofuranosidase YP_003099841.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pst:PSPTO_4577 glycine betaine/choline OpuC ABC transporter, periplasmic substrate-binding protein YP_003099842.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU33720 choline ABC transporter membrane protein YP_003099843.1 KEGG: pol:Bpro_1154 glycine betaine/L-proline transport ATP binding subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003099844.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMa1467 inner-membrane permease YP_003099845.1 KEGG: gsu:GSU0139 hypothetical protein YP_003099846.1 KEGG: acr:Acry_0984 extracellular solute-binding protein YP_003099847.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_0983 binding-protein-dependent transport systems inner membrane component YP_003099848.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cvi:CV_1679 ABC transporter permease YP_003099849.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: acr:Acry_0981 ABC transporter YP_003099850.1 KEGG: sus:Acid_3131 secreted protein YP_003099851.1 PFAM: protein of unknown function DUF305; KEGG: eli:ELI_14360 secreted protein YP_003099853.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sus:Acid_2535 guanine deaminase YP_003099854.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: transthyretin; KEGG: hypothetical protein YP_003099855.1 PFAM: purine catabolism PurC domain protein; KEGG: GK24882 gene product from transcript GK24882- RA YP_003099856.1 KEGG: aav:Aave_4523 superoxide dismutase YP_003099858.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: lch:Lcho_0275 histidine kinase YP_003099859.1 PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein YP_003099860.1 PFAM: protein of unknown function DUF742 YP_003099861.1 PFAM: protein of unknown function ATP binding; KEGG: dac:Daci_0776 protein of unknown function ATP binding YP_003099862.1 PFAM: flavin-containing monooxygenase FMO; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pla:Plav_0443 flavin-containing monooxygenase YP_003099863.1 KEGG: met:M446_0097 hypothetical protein YP_003099864.1 PFAM: protein of unknown function UPF0157; KEGG: mxa:MXAN_5238 hypothetical protein YP_003099865.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: gbm:Gbem_1461 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_003099866.1 PFAM: SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein YP_003099867.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: ppg:PputGB1_0589 ethanolamine transproter YP_003099868.1 PFAM: glutamine synthetase catalytic region; KEGG: acr:Acry_2393 glutamine synthetase, catalytic region YP_003099869.1 PFAM: peptidase C26; glutamine amidotransferase class-I; KEGG: rru:Rru_A0651 glutamine amidotransferase class-I YP_003099870.1 PFAM: Aldehyde Dehydrogenase; KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor) YP_003099871.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: hypothetical protein YP_003099872.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; Helix-turn-helix type 11 domain protein; SMART: regulatory protein GntR HTH; KEGG: swi:Swit_1674 GntR family transcriptional regulator YP_003099873.1 KEGG: bav:BAV1541 competence protein YP_003099875.1 KEGG: ank:AnaeK_2798 response regulator receiver YP_003099876.1 KEGG: saz:Sama_0820 lipoprotein YP_003099877.1 KEGG: acp:A2cp1_4055 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003099878.1 PFAM: ABC transporter; KEGG: bcz:BCZK3149 ABC transporter efflux permease; daunorubicin resistance transmembrane protein YP_003099880.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_003099881.1 PFAM: histidine triad (HIT) protein; KEGG: pca:Pcar_1504 HIT (HINT, histidine triad) family protein YP_003099883.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: noc:Noc_2982 CDP-alcohol phosphatidyltransferase YP_003099884.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_003099885.1 PFAM: glycosyl transferase group 1; KEGG: acp:A2cp1_4300 phosphatidylinositol alpha- mannosyltransferase YP_003099886.1 PFAM: NUDIX hydrolase; KEGG: pzu:PHZ_c0948 mutator MutT protein YP_003099887.1 PFAM: protein of unknown function DUF1696; KEGG: vpa:VPA1559 hypothetical protein YP_003099889.1 PFAM: luciferase-like monooxygenase; KEGG: pde:Pden_1120 luciferase family protein YP_003099890.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_003099891.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sus:Acid_7663 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003099892.1 TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sus:Acid_7658 NCS1 nucleoside transporter YP_003099894.1 PFAM: purine catabolism PurC domain protein; KEGG: pag:PLES_34081 regulatory protein YP_003099895.1 PFAM: aminotransferase class-III; KEGG: sus:Acid_7662 aminotransferase YP_003099896.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: sus:Acid_0680 methylmalonate-semialdehyde dehydrogenase [acylating] YP_003099898.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_003099899.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_003099900.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dds:Ddes_1897 SNO glutamine amidotransferase YP_003099901.1 PFAM: protein of unknown function DUF28; KEGG: gme:Gmet_0743 hypothetical protein YP_003099902.1 KEGG: pna:Pnap_0373 hypothetical protein YP_003099904.1 PFAM: regulatory protein TetR; KEGG: smt:Smal_2152 transcriptional regulator, TetR family YP_003099905.1 PFAM: major facilitator superfamily MFS_1; KEGG: smt:Smal_2153 major facilitator superfamily MFS_1 YP_003099906.1 PFAM: cytochrome P450; KEGG: mrd:Mrad2831_3880 cytochrome P450 YP_003099907.1 PFAM: cytochrome P450; KEGG: pag:PLES_17331 cytochrome P450 YP_003099908.1 PFAM: regulatory protein TetR; KEGG: sus:Acid_6248 TetR family transcriptional regulator YP_003099909.1 PFAM: thioesterase superfamily protein; KEGG: mxa:MXAN_4456 thioesterase family protein YP_003099910.1 PFAM: major facilitator superfamily MFS_1; KEGG: nmu:Nmul_A1807 hypothetical protein YP_003099911.1 PFAM: regulatory protein TetR; KEGG: azo:azo0243 TetR family transcriptional regulator YP_003099912.1 KEGG: hypothetical protein LOC761802 YP_003099913.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: acp:A2cp1_3936 glutamate--cysteine ligase YP_003099914.1 PFAM: protein of unknown function DUF323; KEGG: mxa:MXAN_7471 hypothetical protein YP_003099915.1 KEGG: mch:Mchl_5354 glutamine amidotransferase class-II YP_003099916.1 TIGRFAM: methyltransferase; KEGG: mxa:MXAN_7473 hypothetical protein YP_003099918.1 SMART: helix-turn-helix domain protein YP_003099919.1 PFAM: protein of unknown function DUF397 YP_003099921.1 PFAM: peptidoglycan-binding domain 1 protein YP_003099922.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_0085 peptidoglycan-binding domain 1 YP_003099923.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: eba:ebA6773 aconitate hydratase YP_003099924.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bat:BAS4648 ABC transporter, ATP-binding protein YP_003099925.1 KEGG: bce:BC4749 ABC transporter permease protein YP_003099926.1 KEGG: ade:Adeh_3822 AraC family transcriptional regulator YP_003099927.1 KEGG: bch:Bcen2424_6766 PE-PGRS family protein YP_003099928.1 PFAM: Silent information regulator protein Sir2; KEGG: sat:SYN_00042 sir2 family protein YP_003099929.1 PFAM: carbonic anhydrase; KEGG: xau:Xaut_2228 carbonate dehydratase YP_003099930.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sus:Acid_7357 AMP-dependent synthetase and ligase YP_003099931.1 PFAM: NLP/P60 protein; KEGG: NlpC/P60-like cell-wall peptidase YP_003099932.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mmr:Mmar10_0581 ECF subfamily RNA polymerase sigma-24 factor YP_003099933.1 KEGG: rle:RL0353 transmembrane transport protein YP_003099934.1 KEGG: pfl:PFL_3722 molybdopterin-guanine dinucleotide biosynthesis protein A YP_003099935.1 PFAM: thiopurine S-methyltransferase; KEGG: psa:PST_2541 thiopurine S-methyltransferase YP_003099936.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: reh:H16_B1613 MoxR-like ATPase YP_003099937.1 PFAM: protein of unknown function DUF58; KEGG: pna:Pnap_3246 protein of unknown function DUF58 YP_003099938.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: azo:azo2864 hypothetical protein YP_003099939.1 KEGG: swp:swp_0140 hypothetical protein YP_003099940.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: psa:PST_4124 periplasmic binding protein YP_003099941.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: scl:sce7107 sensor histidine kinase YP_003099942.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: afw:Anae109_0880 two component transcriptional regulator YP_003099943.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: sus:Acid_4463 GAF sensor protein YP_003099944.1 KEGG: dvm:DvMF_1072 hypothetical protein YP_003099945.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: maq:Maqu_2160 hypothetical protein YP_003099946.1 KEGG: maq:Maqu_2160 hypothetical protein YP_003099947.1 KEGG: maq:Maqu_2160 hypothetical protein YP_003099948.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: bph:Bphy_2768 hypothetical protein YP_003099949.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sfu:Sfum_0474 mammalian cell entry related domain protein YP_003099950.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: gme:Gmet_1272 virulence factor MCE-like protein-related protein YP_003099951.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_003099952.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_003099953.1 TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_003099955.1 PFAM: aminoglycoside phosphotransferase; KEGG: bra:BRADO6829 phosphotransferase YP_003099956.1 KEGG: tgr:Tgr7_1062 sec-C motif domain protein YP_003099957.1 KEGG: mxa:MXAN_4837 endoglucanase; PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II YP_003099958.1 PFAM: glycoside hydrolase family 48; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: hch:HCH_02465 RTX toxins and related Ca2+- binding protein YP_003099959.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bha:BH1908 glucan 1,4-beta-glucosidase YP_003099960.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bam:Bamb_4929 LacI family transcription regulator YP_003099961.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein YP_003099962.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0484 transmembrane lipoprotein YP_003099963.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BSU30170 hypothetical protein YP_003099964.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: bha:BH3701 beta-galactosidase YP_003099965.1 KEGG: xcv:XCV1806 hypothetical protein YP_003099966.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: bbr:BB0060 periplasmic divalent cation tolerance protein YP_003099967.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: gur:Gura_3524 MerR family transcriptional regulator YP_003099969.1 PFAM: beta-lactamase; KEGG: bcj:BCAM2165 beta-lactamase, class A YP_003099970.1 PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ade:Adeh_0810 hypothetical protein YP_003099971.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: prw:PsycPRwf_0457 3-oxoacyl-(acyl-carrier- protein) reductase YP_003099972.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_003099973.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic YP_003099974.1 KEGG: hypothetical protein YP_003099975.1 KEGG: bph:Bphy_2507 hypothetical protein YP_003099976.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: hne:HNE_0018 short chain dehydrogenase/reductase family oxidoreductase YP_003099977.1 KEGG: BSM; submaxillary mucin 2 YP_003099980.1 KEGG: GH21940 gene product from transcript GH21940- RA YP_003099982.1 PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: sde:Sde_2272 cellobiohydrolase A (1 4-beta- cellobiosidase A)-like YP_003099983.1 KEGG: sus:Acid_2208 magnesium protoporphyrin chelatase YP_003099984.1 SMART: von Willebrand factor type A; KEGG: aba:Acid345_3257 von Willebrand factor, type A YP_003099985.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: GA27442 gene product from transcript GA27442- RA YP_003099986.1 PFAM: NUDIX hydrolase; KEGG: eca:ECA2974 MutT-like protein YP_003099987.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003099988.1 KEGG: bha:BH2614 cytochrome Caa3 oxidase (subunit I); TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I YP_003099989.1 KEGG: afw:Anae109_2496 cysteinyl-tRNA synthetase; TIGRFAM: cysteine/1-D-myo-inosityl 2-amino-2-deoxy- alpha-D-glucopyranoside ligase; PFAM: Cysteinyl-tRNA synthetase class Ia YP_003099990.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proprotein convertase P; Ig family protein; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003099991.1 KEGG: scl:sce6114 hypothetical protein YP_003099992.1 KEGG: sus:Acid_6164 Ig family protein YP_003099993.1 KEGG: similar to glycoprotein (predicted) YP_003099994.1 TIGRFAM: peptidase S26B, signal peptidase; PFAM: peptidase S24 and S26 domain protein; KEGG: similar to trefoil factor YP_003099995.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: dvm:DvMF_0882 two component transcriptional regulator, winged helix family YP_003099996.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aba:Acid345_3504 response regulator receiver protein YP_003099997.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; KEGG: amc:MADE_03205 histidine kinase response regulator hybrid protein YP_003099998.1 PFAM: protein of unknown function DUF75; KEGG: sfu:Sfum_3209 hypothetical protein YP_003099999.1 TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; vitamin B12 dependent methionine synthase activation region; KEGG: gdi:GDI3502 methionine synthase YP_003100000.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: smt:Smal_0452 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_003100001.1 PFAM: ferric iron reductase; KEGG: aav:Aave_3725 ferric iron reductase protein FhuF YP_003100002.1 PFAM: regulatory protein TetR; KEGG: acr:Acry_3038 TetR family transcriptional regulator YP_003100003.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pag:PLES_23881 FMN oxidoreductase YP_003100004.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pau:PA14_08440 short chain alcohol dehydrogenase YP_003100005.1 KEGG: sdn:Sden_0673 hypothetical protein YP_003100006.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: xfn:XfasM23_1346 phosphoribosyl-ATP diphosphatase YP_003100007.1 PFAM: auxin Efflux Carrier; KEGG: dvm:DvMF_1323 auxin efflux carrier YP_003100008.1 KEGG: smt:Smal_1417 hypothetical protein YP_003100009.1 KEGG: hypothetical protein YP_003100010.1 PFAM: peptidase M50; KEGG: aeh:Mlg_1368 peptidase M50 YP_003100011.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100012.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100013.1 KEGG: bat:BAS2996 hypothetical protein YP_003100014.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: sfu:Sfum_2514 SAM-dependent methyltransferase YP_003100015.1 KEGG: scl:sce5792 hypothetical protein YP_003100016.1 KEGG: scl:sce5792 hypothetical protein YP_003100017.1 PFAM: ATPase AAA; SMART: ATPase AAA; KEGG: gur:Gura_2842 AAA family ATPase, CDC48 subfamily protein YP_003100018.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100019.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100020.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cak:Caul_1642 ABC transporter YP_003100021.1 KEGG: rpb:RPB_1462 binding-protein-dependent transport systems inner membrane component YP_003100022.1 PFAM: aldo/keto reductase; KEGG: ank:AnaeK_3196 aldo/keto reductase YP_003100023.1 PFAM: NUDIX hydrolase; KEGG: pmr:PMI1779 NUDIX hydrolase YP_003100024.1 PFAM: protein of unknown function DUF214; KEGG: ade:Adeh_2042 hypothetical protein YP_003100025.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein YP_003100026.1 PFAM: protein of unknown function DUF797 YP_003100027.1 PFAM: 20S proteasome A and B subunits; KEGG: GI10892 gene product from transcript GI10892- RA YP_003100028.1 PFAM: 20S proteasome A and B subunits; KEGG: proteasome subunit alpha type 2; K02726 20S proteasome subunit alpha 2 YP_003100029.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr4790 oxidoreductase YP_003100030.1 PFAM: regulatory protein TetR; KEGG: azc:AZC_1061 transcriptional regulator YP_003100031.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; ATPase AAA; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003100032.1 PFAM: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region; SMART: phosphoesterase PA-phosphatase related; diacylglycerol kinase catalytic region; KEGG: scl:sce9292 hypothetical protein YP_003100033.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein YP_003100034.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_0483 activator of HSP90 ATPase 1 family protein YP_003100035.1 KEGG: mxa:MXAN_1359 hypothetical protein YP_003100036.1 KEGG: mxa:MXAN_1360 hypothetical protein YP_003100037.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: GG15783 gene product from transcript GG15783- RA YP_003100038.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: nar:Saro_1096 sec-independent protein translocase TatC YP_003100039.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: mxa:MXAN_6724 lipid kinase YP_003100040.1 PFAM: DEAD/DEAH box helicase domain protein; DSH domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: predicted protein YP_003100041.1 KEGG: scl:sce8934 hypothetical protein YP_003100042.1 KEGG: hypothetical protein YP_003100043.1 PFAM: 5'-3' exonuclease; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: rce:RC1_2483 DNA polymerase I YP_003100044.1 PFAM: peptidase M24; creatinase; KEGG: xca:xccb100_1756 proline dipeptidase YP_003100045.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: scl:sce5626 leucine responsive regulatory protein YP_003100046.1 PFAM: aminotransferase class IV; KEGG: xac:XAC1291 hypothetical protein YP_003100047.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_3713 transmembrane protein YP_003100048.1 KEGG: cvi:CV_1143 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003100049.1 KEGG: similar to CG6915-PA YP_003100050.1 PFAM: peptidase S58 DmpA; KEGG: xau:Xaut_4121 peptidase S58 DmpA YP_003100051.1 KEGG: apl:APL_1681 hypothetical protein YP_003100052.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: spe:Spro_3049 pyridoxal-dependent decarboxylase YP_003100053.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: scl:sce0700 ATP-independent RNA helicase YP_003100054.1 PFAM: RelA/SpoT domain protein; KEGG: bha:BH1885 hypothetical protein YP_003100055.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: gbm:Gbem_3934 protein of unknown function DUF6 transmembrane YP_003100057.1 PFAM: YceI family protein; KEGG: afw:Anae109_3638 YceI family protein YP_003100058.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rpa:RPA0821 MarR family transcriptional regulator YP_003100059.1 PFAM: ATPase associated with various cellular activities AAA_3; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; KEGG: gur:Gura_0187 ATPase YP_003100060.1 PFAM: protein of unknown function DUF58; KEGG: scl:sce4442 hypothetical protein YP_003100061.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA1206 acetyl-coenzyme A synthetase YP_003100063.1 KEGG: reu:Reut_A0253 methylmalonyl-CoA mutase, N- terminal:methylmalonyl-CoA mutase, C-terminal; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12- binding domain protein; ArgK protein YP_003100064.1 PFAM: hypothetical protein; hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: bid:Bind_3201 hypothetical protein YP_003100065.1 KEGG: GH15499 gene product from transcript GH15499- RA YP_003100066.1 PFAM: DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; KEGG: bsu:BSU00060 DNA gyrase subunit B YP_003100067.1 KEGG: bcz:BCZK0006 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; Hedgehog/intein hint domain protein YP_003100068.1 PFAM: xylose isomerase; KEGG: atc:AGR_L_3397 hypothetical protein YP_003100069.1 KEGG: scl:sce8945 hypothetical protein YP_003100070.1 PFAM: luciferase-like monooxygenase; KEGG: pfo:Pfl01_0703 luciferase-like YP_003100071.1 PFAM: NADPH-dependent FMN reductase; KEGG: rsq:Rsph17025_0771 NADPH-dependent FMN reductase YP_003100072.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_003100073.1 KEGG: msl:Msil_2593 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; EAL domain protein YP_003100074.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: pol:Bpro_1654 hypothetical protein YP_003100076.1 KEGG: bcy:Bcer98_2113 hypothetical protein YP_003100077.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcy:Bcer98_2114 ABC transporter-related protein YP_003100078.1 PFAM: cobalt transport protein; KEGG: hha:Hhal_0811 NADH/ubiquinone/plastoquinone (complex I) YP_003100080.1 KEGG: MTA2; hydroxyproline-rich glycoprotein YP_003100081.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: hypothetical protein YP_003100082.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: bur:Bcep18194_A5869 hypothetical protein YP_003100084.1 PFAM: ROK family protein; KEGG: vei:Veis_3275 ROK family protein YP_003100085.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein YP_003100086.1 PFAM: xylose isomerase; AP endonuclease 2 domain protein; KEGG: vei:Veis_3268 xylose isomerase domain protein TIM barrel YP_003100087.1 PFAM: FAD linked oxidase domain protein; D- arabinono-14-lactone oxidase; KEGG: hypothetical protein YP_003100088.1 PFAM: major facilitator superfamily MFS_1; KEGG: swi:Swit_4414 protein of unknown function DUF894, DitE YP_003100090.1 PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_0103 transcriptional regulator, TetR family YP_003100092.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rpe:RPE_3910 anti-sigma-factor antagonist YP_003100093.1 TIGRFAM: methylase; PFAM: methyltransferase small; KEGG: acp:A2cp1_0395 modification methylase, HemK family YP_003100094.1 SMART: hypothetical protein YP_003100095.1 KEGG: pzu:PHZ_c0782 hypothetical protein YP_003100096.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: dsh:Dshi_1749 carboxylate-amine ligase YP_003100097.1 PFAM: luciferase-like monooxygenase; KEGG: bbt:BBta_7516 alkanal monooxygenase YP_003100098.1 KEGG: mxa:MXAN_2785 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003100100.1 KEGG: SNF2 superfamily protein YP_003100101.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: bha:BH2438 flagellar biosynthesis protein FlhA YP_003100103.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dds:Ddes_0324 response regulator receiver protein YP_003100104.1 KEGG: aba:Acid345_1530 hypothetical protein YP_003100105.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: aba:Acid345_1527 response regulator receiver protein, CheY YP_003100106.1 KEGG: aba:Acid345_1529 MCP methyltransferase, CheR- type; PFAM: MCP methyltransferase CheR-type; methyltransferase type 12; SMART: MCP methyltransferase CheR-type YP_003100107.1 KEGG: mmr:Mmar10_0661 chemotaxis-specific methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_003100109.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1526 methyl-accepting chemotaxis sensory transducer YP_003100110.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: aba:Acid345_1525 CheW protein YP_003100111.1 PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP- binding region ATPase domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases YP_003100113.1 KEGG: bxe:Bxe_B0776 membrane glycoprotein YP_003100114.1 PFAM: type III secretion exporter; KEGG: cti:RALTA_B0268 FlhB: flagellar biosynthetic protein. FlhB/HrpN/YscU/SpaS family. YP_003100115.1 PFAM: type III secretion system inner membrane R protein; KEGG: tbd:Tbd_1612 flagellar biosynthesis protein FliR YP_003100116.1 PFAM: export protein FliQ family 3; KEGG: tgr:Tgr7_1332 flagellar biosynthetic protein FliQ YP_003100117.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_003100118.1 KEGG: hypothetical protein YP_003100119.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: bvi:Bcep1808_0049 flagellar motor switch protein FliN YP_003100120.1 PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: hhe:HH1147 flagellar motor switch protein FliM YP_003100121.1 PFAM: flagellar basal body-associated protein FliL; KEGG: rso:RSp0379 flagellar basal body-associated protein FliL YP_003100122.1 PFAM: OmpA/MotB domain protein; KEGG: ppd:Ppro_3470 OmpA/MotB domain-containing protein YP_003100123.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: glo:Glov_0031 MotA/TolQ/ExbB proton channel YP_003100124.1 PFAM: flagellar FlbD family protein; KEGG: bha:BH2448 hypothetical protein YP_003100125.1 PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: bha:BH2449 flagellar basal body rod protein FlgG YP_003100126.1 PFAM: flagellar hook capping protein; KEGG: rpe:RPE_1177 flagellar basal body rod modification protein YP_003100127.1 PFAM: flagellar hook-length control protein; KEGG: SNF2 superfamily protein YP_003100128.1 PFAM: lytic transglycosylase catalytic; NLP/P60 protein; KEGG: bsu:BSU11570 hypothetical protein YP_003100129.1 KEGG: bra:BRADO2721 TolA family protein YP_003100130.1 KEGG: afw:Anae109_2216 FliI/YscN family ATPase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: ATPase AAA YP_003100131.1 PFAM: flagellar assembly protein FliH; KEGG: azo:azo2718 flagellar assembly protein FliH YP_003100132.1 TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: bha:BH2457 flagellar motor switch protein G YP_003100133.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: gbm:Gbem_3838 flagellar M-ring protein FliF YP_003100134.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: pca:Pcar_1193 flagellar hook-basal body complex protein FliE YP_003100135.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: efe:EFER_1855 flagellar component of cell- proximal portion of basal-body rod YP_003100136.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: eta:ETA_20410 flagellar basal-body rod protein YP_003100138.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: pca:Pcar_1111 flagellar protein FliS YP_003100139.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook- associated protein 2 domain protein; KEGG: xcb:XC_2246 flagellar protein YP_003100140.1 PFAM: flagellin domain protein; KEGG: nmu:Nmul_A1337 flagellin-like YP_003100141.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 3 domain protein; KEGG: gbm:Gbem_3764 RNA polymerase, sigma 28 subunit, FliA/WhiG YP_003100142.1 PFAM: FlgN family protein; KEGG: gur:Gura_4100 hypothetical protein YP_003100143.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ppd:Ppro_3455 flagellar hook-associated protein FlgK YP_003100144.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: gur:Gura_4098 flagellar hook-associated protein 3 YP_003100145.1 PFAM: protein of unknown function DUF180; KEGG: dps:DP2692 flagellar assembly protein FliW YP_003100146.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: mca:MCA0391 carbon storage regulator YP_003100147.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proprotein convertase P; KEGG: mca:MCA0875 serine protease YP_003100148.1 KEGG: sus:Acid_3859 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS domain containing protein YP_003100149.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rce:RC1_0432 KDP operon transcriptional regulatory protein KdpE YP_003100150.1 PFAM: NmrA family protein; KEGG: sus:Acid_6298 NmrA family protein YP_003100151.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mxa:MXAN_6486 transcriptional regulator, MarR family YP_003100152.1 KEGG: bmj:BMULJ_06047 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: histidine kinase A domain protein; PAS domain containing protein YP_003100153.1 KEGG: mag:amb2954 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_003100154.1 PFAM: Metal-dependent hydrolase HDOD; response regulator receiver; SMART: response regulator receiver; KEGG: dvu:DVU0330 response regulator YP_003100155.1 KEGG: hypothetical protein YP_003100156.1 KEGG: dal:Dalk_3918 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; PAS fold- 4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein YP_003100157.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sat:SYN_01373 hydrogenase transcriptional regulatory protein YP_003100158.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_0417 transcriptional regulator, GntR family YP_003100160.1 PFAM: CHRD domain containing protein; SMART: CHRD domain containing protein; KEGG: pzu:PHZ_c0812 hypothetical protein YP_003100161.1 KEGG: bja:blr0122 hypothetical protein YP_003100162.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: efe:EFER_2801 MarR-family regulatory protein YP_003100163.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003100164.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein YP_003100165.1 KEGG: hypothetical protein YP_003100166.1 KEGG: pen:PSEEN0086 alginate biosynthesis sensor protein KinB; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; MASE1 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003100167.1 PFAM: branched-chain amino acid transport; KEGG: pin:Ping_3723 branched-chain amino acid transport YP_003100168.1 PFAM: AzlC family protein; KEGG: sbl:Sbal_4248 AzlC family protein YP_003100169.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: spe:Spro_3514 AsnC family transcriptional regulator YP_003100170.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr5567 hypothetical protein YP_003100171.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr3465 TetR family transcriptional regulator YP_003100173.1 PFAM: RbsD or FucU transport; KEGG: csa:Csal_0367 RbsD or FucU transport YP_003100174.1 KEGG: predicted gene, 672682 YP_003100175.1 SMART: helix-turn-helix domain protein; KEGG: bac:BamMC406_3547 XRE family transcriptional regulator YP_003100176.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bpy:Bphyt_6333 short-chain dehydrogenase/reductase SDR YP_003100178.1 molecular chaperone YP_003100179.1 KEGG: rpi:Rpic_3955 transcriptional regulator, MarR family YP_003100181.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: pde:Pden_1769 3-oxoacyl-(acyl-carrier- protein) reductase YP_003100183.1 PFAM: luciferase-like monooxygenase; KEGG: oxidoreductase protein YP_003100184.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: tcx:Tcr_0016 RNA-binding S4 YP_003100185.1 KEGG: gbm:Gbem_1481 transglycosylase-associated protein YP_003100186.1 PFAM: luciferase-like monooxygenase; KEGG: swi:Swit_2098 luciferase family protein YP_003100187.1 PFAM: siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: smt:Smal_2998 FAD-binding 9 siderophore- interacting domain protein YP_003100188.1 KEGG: pde:Pden_0727 MotA/TolQ/ExbB proton channel YP_003100189.1 KEGG: aha:AHA_2314 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003100190.1 PFAM: extracellular solute-binding protein family 1; KEGG: mmw:Mmwyl1_2762 extracellular solute-binding protein YP_003100191.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein YP_003100192.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL2327 transmembrane component of ABC transporter YP_003100193.1 KEGG: GK24108 gene product from transcript GK24108- RA YP_003100194.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein YP_003100195.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100196.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100198.1 KEGG: bpy:Bphyt_5600 nitroreductase YP_003100199.1 KEGG: hypothetical protein YP_003100200.1 PFAM: nitroreductase; KEGG: rce:RC1_3281 hypothetical protein YP_003100202.1 PFAM: UspA domain protein; KEGG: hha:Hhal_2190 UspA domain protein YP_003100203.1 KEGG: zmo:ZMO1569 pyruvate-formate lyase activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein YP_003100204.1 KEGG: rru:Rru_A3000 formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical YP_003100205.1 KEGG: ade:Adeh_0129 methyltransferase type 11 YP_003100207.1 TIGRFAM: hypothetical protein; PFAM: Cna B domain protein; protein of unknown function DUF11; KEGG: colA; Cna B-type domain-containing protein YP_003100208.1 PFAM: regulatory protein TetR; KEGG: rso:RS05498 transcription regulator protein YP_003100209.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: scl:sce6363 short chain dehydrogenase YP_003100211.1 KEGG: prw:PsycPRwf_0069 cholesterol oxidase YP_003100212.1 PFAM: Ion transport protein; KEGG: tmz:Tmz1t_1575 ion transport protein YP_003100213.1 PFAM: alpha/beta hydrolase fold; KEGG: rlt:Rleg2_6302 alpha/beta hydrolase fold YP_003100214.1 PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 glycolate oxidase YP_003100215.1 PFAM: protein of unknown function DUF397 YP_003100216.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rlt:Rleg2_3945 transcriptional regulator, XRE family YP_003100217.1 KEGG: hypothetical protein YP_003100220.1 PFAM: hypothetical protein; KEGG: nmu:Nmul_A2438 hypothetical protein YP_003100221.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: aba:Acid345_0656 transcriptional regulator, DeoR family YP_003100222.1 PFAM: sodium/hydrogen exchanger; KEGG: mrd:Mrad2831_1143 Na+/H+ antiporter YP_003100223.1 KEGG: rru:Rru_A1270 hypothetical protein YP_003100224.1 PFAM: metallophosphoesterase; KEGG: scl:sce7166 DNA repair exonuclease family protein YP_003100225.1 KEGG: ade:Adeh_1847 chromosome segregation ATPase YP_003100227.1 SMART: helix-turn-helix domain protein; KEGG: bja:bll4873 hypothetical protein YP_003100228.1 PFAM: siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: jan:Jann_2126 FAD-binding 9, siderophore- interacting YP_003100229.1 PFAM: regulatory protein TetR; KEGG: rpb:RPB_4514 TetR family transcriptional regulator YP_003100230.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: ccs:CCNA_02438 quinone oxidoreductase YP_003100231.1 KEGG: scl:sce8913 cytochrome P450 CYP109C2 YP_003100232.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_4546 LysR family transcriptional regulator YP_003100233.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dvm:DvMF_1193 protein of unknown function DUF6 transmembrane YP_003100234.1 PFAM: protein of unknown function UPF0016; KEGG: sat:SYN_01349 hypothetical protein YP_003100236.1 KEGG: mag:amb4032 hypothetical protein YP_003100239.1 KEGG: gbm:Gbem_1185 hypothetical protein YP_003100240.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; SMART: regulatory protein MarR; KEGG: atc:AGR_C_466 hypothetical protein YP_003100241.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: reh:H16_A0077 predicted PecM protein YP_003100242.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: rsq:Rsph17025_3273 acetamidase/formamidase YP_003100243.1 PFAM: extracellular solute-binding protein family 5; KEGG: gbe:GbCGDNIH1_0125 amide-UreA binding protein YP_003100244.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_4148 binding-protein-dependent transport systems inner membrane component YP_003100245.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pca:Pcar_1867 ABC-type transport system protein YP_003100246.1 PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator, HxlR family YP_003100247.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: ank:AnaeK_3358 alcohol dehydrogenase zinc- binding domain protein YP_003100250.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rce:RC1_3267 phosphate regulon transcriptional regulatory protein PhoB YP_003100251.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: scl:sce2655 two-component hybrid sensor and regulator YP_003100252.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sat:SYN_02356 anti-sigma F factor antagonist YP_003100253.1 PFAM: glycoside hydrolase family 2 sugar binding; PA14 domain protein; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; SMART: PA14 domain protein; LamG domain protein jellyroll fold domain protein; KEGG: sus:Acid_6668 glycoside hydrolase family protein YP_003100254.1 PFAM: major facilitator superfamily MFS_1; KEGG: maq:Maqu_2048 major facilitator superfamily transporter YP_003100255.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: met:M446_5037 GntR family transcriptional regulator YP_003100256.1 KEGG: GF15944 gene product from transcript GF15944- RA YP_003100258.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dvl:Dvul_2983 anti-sigma-factor antagonist YP_003100259.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: dvl:Dvul_0672 peptidase M20 YP_003100260.1 KEGG: afw:Anae109_0106 integral membrane sensor signal transduction histidine kinase YP_003100261.1 PFAM: chitin-binding domain 3 protein; KEGG: sml:Smlt4515 cellulose/chitin- binding protein YP_003100262.1 PFAM: integral membrane protein TerC; KEGG: csa:Csal_1104 integral membrane protein TerC YP_003100263.1 PFAM: isochorismatase hydrolase; KEGG: bid:Bind_1386 isochorismatase hydrolase YP_003100264.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: mes:Meso_0085 peptidoglycan-binding domain 1 YP_003100266.1 KEGG: rso:RS02209 transmembrane protein YP_003100267.1 TIGRFAM: hypothetical protein; PFAM: protein of unknown function DUF11; KEGG: bce:BC1592 cell surface protein YP_003100269.1 KEGG: similar to mucin 2; K10955 intestinal mucin- 2 YP_003100270.1 SMART: von Willebrand factor type A; KEGG: dac:Daci_0766 von Willebrand factor type A YP_003100271.1 KEGG: dac:Daci_0764 hypothetical protein YP_003100273.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ank:AnaeK_0122 serine/threonine protein kinase YP_003100274.1 KEGG: rce:RC1_0257 puromycin N-acetyltransferase YP_003100275.1 KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003100276.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: eca:ECA1488 non-ribosomal peptide synthetase YP_003100277.1 PFAM: beta-ketoacyl synthase; acyl transferase; KR domain protein; short-chain dehydrogenase/reductase SDR; 2- nitropropane dioxygenase NPD; phosphopantetheine-binding; KEGG: sus:Acid_1972 beta-ketoacyl synthase YP_003100278.1 PFAM: beta-ketoacyl synthase; acyl transferase; 4'- phosphopantetheinyl transferase; KEGG: sus:Acid_1973 beta-ketoacyl synthase YP_003100279.1 KEGG: pub:SAR11_0708 acyl carrier protein (ACP) YP_003100280.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_1444 beta-ketoadipate enol-lactone hydrolase protein YP_003100281.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: bcm:Bcenmc03_1778 glycosyl transferase family protein YP_003100282.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: rce:RC1_1837 ABC transporter, ATP-binding YP_003100283.1 PFAM: lipolytic protein G-D-S-L family; KEGG: nar:Saro_1805 hypothetical protein YP_003100284.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mxa:MXAN_0345 N-acetylmuramoyl-L- alanine amidase YP_003100285.1 SMART: CHRD domain containing protein; KEGG: scl:sce5878 hypothetical protein YP_003100287.1 PFAM: YCII-related; KEGG: scl:sce5148 hypothetical protein YP_003100288.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: sus:Acid_3701 RNA polymerase ECF-subfamily sigma factor YP_003100289.1 KEGG: scl:sce4774 peptidase M10A YP_003100290.1 PFAM: Aldehyde Dehydrogenase; KEGG: bcm:Bcenmc03_6120 aldehyde dehydrogenase YP_003100292.1 KEGG: acp:A2cp1_3940 hypothetical protein YP_003100293.1 KEGG: hypothetical protein YP_003100294.1 KEGG: MUC17; mucin 17, cell surface associated YP_003100295.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: ATPase AAA; KEGG: mrd:Mrad2831_1397 ATPase YP_003100296.1 PFAM: VWA containing CoxE family protein; KEGG: ecs:ECs2930 hypothetical protein YP_003100297.1 KEGG: mrd:Mrad2831_1392 zinc finger SWIM domain- containing protein YP_003100299.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1222 AraC-like transcription regulator YP_003100300.1 PFAM: DoxX family protein; KEGG: mes:Meso_2920 DoxX YP_003100301.1 PFAM: Catalase domain protein; KEGG: psa:PST_0039 hydroperoxidase II YP_003100302.1 PFAM: endoribonuclease L-PSP; KEGG: hypothetical protein YP_003100303.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: phenazine biosynthesis PhzC/PhzF protein; KEGG: psb:Psyr_3359 phenazine biosynthesis PhzC/PhzF protein YP_003100304.1 SMART: prolyl 4-hydroxylase alpha subunit; KEGG: bha:BH2933 hypothetical protein YP_003100306.1 PFAM: hypothetical protein; KEGG: hypothetical protein YP_003100307.1 PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_3357 EmrB/QacA family drug resistance transporter YP_003100308.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: ppw:PputW619_3117 MarR family transcriptional regulator YP_003100309.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein YP_003100310.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: dac:Daci_3143 intradiol ring-cleavage dioxygenase YP_003100311.1 PFAM: transcription activator effector binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcb:BCB4264_A2545 transcriptional regulator, MerR family YP_003100312.1 PFAM: metallophosphoesterase; KEGG: xcb:XC_4140 hypothetical protein YP_003100313.1 KEGG: mxa:MXAN_5493 WD domain G-beta repeat protein YP_003100314.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: scl:sce5109 protein kinase YP_003100315.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: mpo:Mpop_1395 LPXTG-motif cell wall anchor domain protein YP_003100316.1 KEGG: GK23348 gene product from transcript GK23348- RA YP_003100317.1 PFAM: extracellular solute-binding protein family 1; KEGG: ret:RHE_CH00696 alpha-glucoside ABC transporter, substrate-binding protein YP_003100318.1 PFAM: cytochrome P450; KEGG: hypothetical protein YP_003100319.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:blr7343 short-chain dehydrogenase YP_003100320.1 PFAM: major facilitator superfamily MFS_1; KEGG: efe:EFER_2257 lactose/glucose efflux system YP_003100321.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mag:amb1485 transcriptional regulator YP_003100322.1 KEGG: hypothetical protein LOC743833 YP_003100323.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: ABR142Wp; K01529 YP_003100324.1 KEGG: hch:HCH_03911 hypothetical protein YP_003100325.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: aha:AHA_0491 AsnC family transcriptional regulator YP_003100326.1 KEGG: scl:sce1853 hypothetical protein YP_003100330.1 KEGG: hypothetical protein YP_003100331.1 PFAM: acriflavin resistance protein; KEGG: bcb:BCB4264_A5560 transporter, AcrB/AcrD/AcrF family YP_003100332.1 KEGG: afw:Anae109_0827 hypothetical protein YP_003100333.1 KEGG: AGAP007349-PA YP_003100334.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1465 major facilitator transporter YP_003100335.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: scl:sce6060 hypothetical protein YP_003100336.1 PFAM: cytochrome oxidase assembly; KEGG: tgr:Tgr7_3001 cytochrome oxidase assembly YP_003100337.1 KEGG: sf3a2; splicing factor 3a, subunit 2, 66kDa YP_003100338.1 KEGG: met:M446_2712 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003100339.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: dsh:Dshi_3592 Cna B domain-containing protein YP_003100340.1 PFAM: regulatory protein TetR; KEGG: ank:AnaeK_2446 transcriptional regulator, TetR family YP_003100341.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2445 short-chain dehydrogenase/reductase SDR YP_003100342.1 KEGG: bpt:Bpet3133 translation initiation factor IF- 2 YP_003100343.1 PFAM: Ricin B lectin; KEGG: scl:sce0966 hypothetical protein YP_003100344.1 KEGG: pap:PSPA7_4431 hypothetical protein YP_003100345.1 KEGG: rde:RD1_A0036 hypothetical protein YP_003100346.1 PFAM: pectate lyase; KEGG: hypothetical protein YP_003100347.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: atc:AGR_L_1807 hypothetical protein YP_003100348.1 PFAM: alanine racemase domain protein; KEGG: atc:AGR_L_1808 hypothetical protein YP_003100349.1 PFAM: YheO domain protein; KEGG: pfl:PFL_2666 hypothetical protein YP_003100350.1 KEGG: bxe:Bxe_A2027 acyl-CoA dehydrogenase- related protein YP_003100351.1 PFAM: LmbE family protein; methyltransferase type 11; NodS family protein; methyltransferase type 12; KEGG: psb:Psyr_3000 methyltransferase YP_003100352.1 PFAM: glycosyl transferase family 2; KEGG: xcb:XC_2588 glycosyl transferase-related protein YP_003100353.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003100354.1 PFAM: pectate lyase; KEGG: hypothetical protein YP_003100355.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein YP_003100356.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smt:Smal_2681 monosaccharide-transporting ATPase YP_003100357.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH1924 sugar transport system (sugar- binding protein) YP_003100358.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: vei:Veis_3457 alpha-N-arabinofuranosidase YP_003100359.1 PFAM: glycoside hydrolase family 35; glycoside hydrolase family 42 domain protein; KEGG: glb1l; galactosidase, beta 1-like YP_003100360.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: scl:sce3081 lactose operon repressor YP_003100362.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dal:Dalk_4824 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003100363.1 KEGG: SL44-1; basic proline-rich protein YP_003100368.1 KEGG: ank:AnaeK_0087 hypothetical protein YP_003100369.1 KEGG: XylD; endoxylanase D; PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II YP_003100370.1 PFAM: propeptide PepSY amd peptidase M4; PepSY- associated TM helix domain protein; KEGG: psb:Psyr_2687 PepSY-associated TM helix YP_003100371.1 KEGG: acp:A2cp1_3455 tetratricopeptide TPR_2 repeat protein YP_003100372.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: kpe:KPK_3281 tetracycline repressor protein class A from transposon 1721 YP_003100374.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_003100376.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: reu:Reut_A1417 Appr-1-p processing YP_003100377.1 PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase YP_003100379.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bpe:BP2620 membrane efflux protein YP_003100380.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_0388 TetR family transcriptional regulator YP_003100382.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sus:Acid_1594 GntR family transcriptional regulator YP_003100383.1 KEGG: hypothetical protein LOC100018482 YP_003100385.1 PFAM: Sigma-70 region 4 type 2; KEGG: ajs:Ajs_2554 ECF subfamily RNA polymerase sigma-24 factor YP_003100386.1 PFAM: sigma-70 region 2 domain protein; KEGG: scl:sce6054 ECF family RNA polymerase sigma factor YP_003100387.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: tgr:Tgr7_0733 NAD-dependent epimerase/dehydratase YP_003100388.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_003100389.1 PFAM: ANTAR domain protein; KEGG: mpo:Mpop_5014 response regulator receiver and ANTAR domain protein YP_003100390.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_1958 short-chain dehydrogenase/reductase SDR YP_003100391.1 PFAM: regulatory protein TetR; KEGG: gdi:GDI0313 TetR family transcriptional regulator YP_003100392.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: scl:sce0163 hypothetical protein YP_003100393.1 PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: mxa:MXAN_5100 NmrA family protein YP_003100394.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bpt:Bpet2994 MarR family transcriptional regulator YP_003100396.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003100397.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_4437 TetR family transcriptional regulator YP_003100398.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mrd:Mrad2831_2095 ABC transporter YP_003100399.1 KEGG: mxa:MXAN_6120 hypothetical protein YP_003100400.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rpd:RPD_3981 helix-turn-helix, type 11 YP_003100401.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ppw:PputW619_2963 glyoxalase/bleomycin resistance protein/dioxygenase YP_003100402.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: pat:Patl_3506 inosine/uridine-preferring nucleoside hydrolase YP_003100403.1 PFAM: major facilitator superfamily MFS_1; riboflavin kinase; flavin reductase domain protein FMN- binding; KEGG: xfa:XF1765 drug:proton antiporter YP_003100404.1 KEGG: mms:mma_3466 xenobiotic compound monooxygenase A subunit YP_003100405.1 PFAM: isochorismatase hydrolase; KEGG: pla:Plav_0992 isochorismatase hydrolase YP_003100406.1 PFAM: luciferase-like monooxygenase; KEGG: ccs:CCNA_01227 nitrilotriacetate monooxygenase YP_003100407.1 PFAM: NMT1/THI5 like domain protein; KEGG: oan:Oant_0280 NMT1/THI5 like domain protein YP_003100408.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbr:BB0643 transport system permease protein YP_003100409.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pla:Plav_0892 ABC transporter YP_003100411.1 KEGG: bch:Bcen2424_2530 hypothetical protein YP_003100412.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rso:RS02380 two-component sensor histidine kinase transcription regulator protein YP_003100413.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sfu:Sfum_2007 two component transcriptional regulator, winged helix family YP_003100414.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: sal:Sala_3102 hypothetical protein YP_003100415.1 KEGG: hypothetical protein YP_003100416.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: pla:Plav_2411 alcohol dehydrogenase YP_003100417.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mno:Mnod_4658 molybdopterin dehydrogenase FAD- binding YP_003100418.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: azc:AZC_4623 dehydrogenase YP_003100419.1 PFAM: FAD dependent oxidoreductase; KEGG: scl:sce3282 monooxygenase flavin-binding family protein YP_003100420.1 PFAM: regulatory protein TetR; KEGG: lch:Lcho_1914 TetR family transcriptional regulator YP_003100422.1 PFAM: conserved hypothetical protein; KEGG: lch:Lcho_0031 hypothetical protein YP_003100424.1 KEGG: hypothetical protein YP_003100425.1 KEGG: hypothetical protein YP_003100426.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: pol:Bpro_0095 transcriptional regulator NanR YP_003100427.1 PFAM: major facilitator superfamily MFS_1; KEGG: eca:ECA0865 transport protein YP_003100428.1 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone YP_003100429.1 TIGRFAM: ribose 5-phosphate isomerase; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: ribose/galactose isomerase; KEGG: similar to ribose 5-phosphate isomerase; K01808 ribose 5-phosphate isomerase B YP_003100430.1 PFAM: triosephosphate isomerase; KEGG: eca:ECA0867 triosephosphate isomerase YP_003100431.1 PFAM: xylose isomerase; KEGG: eca:ECA0868 hypothetical protein YP_003100432.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Acetohydroxy acid isomeroreductase catalytic domain protein; KEGG: eca:ECA0869 hypothetical protein YP_003100433.1 TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; KEGG: scl:sce0560 hypothetical protein YP_003100435.1 KEGG: gbe:GbCGDNIH1_0912 phosphate transport system permease protein PstA YP_003100436.1 KEGG: scl:sce2943 phosphate ABC transporter, ATP- binding protein PstB YP_003100437.1 KEGG: yen:YE4124 isochorismatase family hydrolase YP_003100439.1 PFAM: FAD dependent oxidoreductase; KEGG: azo:azo0209 sarcosine oxidase, beta subunit YP_003100440.1 KEGG: bha:BH1846 acyl-carrier protein YP_003100441.1 KEGG: bmv:BMASAVP1_A1623 L-ornithine 5- monooxygenase YP_003100442.1 PFAM: cupin; KEGG: psp:PSPPH_2411 hypothetical protein YP_003100443.1 PFAM: tRNA synthetase class I (M); KEGG: pen:PSEEN0982 methionine--tRNA ligase YP_003100444.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; KEGG: plu:plu0116 hypothetical protein YP_003100445.1 PFAM: amidinotransferase; KEGG: aeh:Mlg_0130 amidinotransferase YP_003100446.1 KEGG: gbm:Gbem_0509 hypothetical protein YP_003100447.1 PFAM: extracellular solute-binding protein family 5; KEGG: acr:Acry_1185 extracellular solute-binding protein YP_003100448.1 PFAM: sodium/hydrogen exchanger; KEGG: mno:Mnod_3112 sodium/hydrogen exchanger YP_003100449.1 PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: plu:plu0116 hypothetical protein YP_003100450.1 PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_4388 major facilitator superfamily MFS_1 YP_003100452.1 PFAM: O-methyltransferase; KEGG: mxa:MXAN_2296 O-methyltransferase family protein YP_003100453.1 KEGG: ade:Adeh_0244 LigA YP_003100454.1 KEGG: hypothetical protein YP_003100455.1 KEGG: hch:HCH_01940 phytoene dehydrogenase and related protein YP_003100456.1 PFAM: hypothetical protein; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003100457.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bca:BCE_2589 ATP-binding transport protein NatA YP_003100459.1 PFAM: Thioesterase; KEGG: bpd:BURPS668_A0873 pyochelin biosynthetic protein PchC YP_003100460.1 PFAM: regulatory protein TetR; KEGG: tmz:Tmz1t_0804 transcriptional regulator, TetR family YP_003100461.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1 YP_003100462.1 PFAM: short-chain dehydrogenase/reductase SDR; beta- ketoacyl synthase; KR domain protein; acyl transferase; erythronolide synthase docking; phosphopantetheine- binding; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA0602 type I polyketide synthase YP_003100463.1 PFAM: short-chain dehydrogenase/reductase SDR; beta- ketoacyl synthase; acyl transferase; KR domain protein; erythronolide synthase docking; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003100464.1 PFAM: acyl transferase; beta-ketoacyl synthase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; erythronolide synthase docking; NAD-dependent epimerase/dehydratase; phosphopantetheine- binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003100465.1 PFAM: short-chain dehydrogenase/reductase SDR; beta- ketoacyl synthase; acyl transferase; KR domain protein; erythronolide synthase docking; Thioesterase; NAD- dependent epimerase/dehydratase; phosphopantetheine- binding; KEGG: met:M446_0170 beta-ketoacyl synthase YP_003100466.1 TIGRFAM: proline-specific peptidase; PFAM: alpha/beta hydrolase fold; KEGG: rru:Rru_A2180 peptidase S33, tricorn interacting factor 1 YP_003100468.1 KEGG: mrd:Mrad2831_0184 phosphopantetheine-binding YP_003100469.1 PFAM: AMP-dependent synthetase and ligase; KEGG: gbm:Gbem_0542 amino acid adenylation domain protein YP_003100470.1 PFAM: AMP-dependent synthetase and ligase; KEGG: aeh:Mlg_0131 amino acid adenylation domain- containing protein YP_003100471.1 KEGG: plu:plu2834 acyl carrier protein S- malonyltransferase YP_003100472.1 PFAM: aminotransferase class I and II; KEGG: aeh:Mlg_2554 aminotransferase YP_003100473.1 KEGG: mxa:MXAN_6263 hypothetical protein YP_003100474.1 PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome P450 YP_003100475.1 KEGG: cak:Caul_1918 hypothetical protein YP_003100476.1 PFAM: short-chain dehydrogenase/reductase SDR; beta- ketoacyl synthase; Male sterility domain; acyl transferase; KR domain protein; phosphopantetheine- binding; NAD-dependent epimerase/dehydratase; KEGG: met:M446_0170 beta-ketoacyl synthase YP_003100477.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: reh:H16_A1278 ATP-dependent transcriptional regulator containing adenylate cyclase related domains YP_003100478.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_3629 ABC transporter YP_003100479.1 PFAM: protein of unknown function DUF214; KEGG: gme:Gmet_1517 hypothetical protein YP_003100480.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: psb:Psyr_1940 LuxR response regulator receiver YP_003100481.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: cps:CPS_1261 sensor histidine kinase YP_003100483.1 KEGG: hypothetical protein YP_003100484.1 PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein YP_003100485.1 PFAM: O-methyltransferase; KEGG: mlo:mlr0279 O-methyltransferase YP_003100486.1 KEGG: afw:Anae109_2424 DNA mismatch repair protein MutS domain-containing protein YP_003100487.1 PFAM: periplasmic binding protein; KEGG: rle:RL3052 cationic solute-binding component of ABC transporter YP_003100488.1 PFAM: transport system permease protein; ABC transporter; KEGG: rec:RHECIAT_PC0000463 iron ABC transporter, permease protein YP_003100489.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mpo:Mpop_4222 ABC transporter YP_003100490.1 PFAM: regulatory protein TetR; KEGG: bcr:BCAH187_A5151 transcriptional regulator, TetR family YP_003100491.1 PFAM: beta-lactamase domain protein; KEGG: Zn-dependent hydrolases, including glyoxylases YP_003100492.1 KEGG: sal:Sala_0018 hypothetical protein YP_003100493.1 KEGG: jan:Jann_1769 mucin-associated surface protein YP_003100494.1 PFAM: NB-ARC domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003100495.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_2145 transcriptional regulator, TetR family YP_003100496.1 PFAM: luciferase-like monooxygenase; KEGG: rpb:RPB_4431 coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin YP_003100497.1 PFAM: regulatory protein LuxR; hypothetical protein; SMART: regulatory protein LuxR; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003100498.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive YP_003100499.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gdj:Gdia_2404 drug resistance transporter, EmrB/QacA subfamily YP_003100500.1 TIGRFAM: amino acid adenylation domain protein; non- ribosomal peptide synthase; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: pap:PSPA7_2858 peptide synthase YP_003100501.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dac:Daci_3149 ABC transporter YP_003100502.1 PFAM: transport system permease protein; KEGG: yen:YE3620 iron-enterobactin transporter permease YP_003100503.1 PFAM: transport system permease protein; KEGG: cvi:CV_2236 iron-enterobactin transporter membrane protein YP_003100504.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU39610 hypothetical protein YP_003100505.1 PFAM: siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: cti:RALTA_B1102 siderophore-interacting protein YP_003100506.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce3880 (2,3-dihydroxybenzoyl)adenylate synthase YP_003100507.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: mxa:MXAN_3646 isochorismate synthase DhbC YP_003100508.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcy:Bcer98_1754 2,3-dihydroxybenzoate-2,3- dehydrogenase YP_003100509.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: hypothetical protein YP_003100510.1 PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein YP_003100511.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bte:BTH_I1413 iron compound ABC transporter, ATP-binding protein YP_003100512.1 PFAM: periplasmic binding protein; KEGG: bpd:BURPS668_3152 iron chelate uptake ABC transporter, periplasmic solute-binding protein YP_003100513.1 SMART: helix-turn-helix domain protein; KEGG: bcr:BCAH187_A3038 DNA-binding protein YP_003100515.1 KEGG: bpl:BURPS1106A_1193 DNA translocase FtsK YP_003100516.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100517.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100518.1 KEGG: azc:AZC_3061 enolase; TIGRFAM: enolase; PFAM: enolase YP_003100521.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bsu:BSU09890 hypothetical protein YP_003100522.1 KEGG: bha:BH1167 hypothetical protein YP_003100523.1 KEGG: hypothetical protein YP_003100524.1 PFAM: chemotaxis sensory transducer; GAF domain protein; SMART: chemotaxis sensory transducer; GAF domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003100525.1 PFAM: GAF domain protein; KEGG: tmz:Tmz1t_1845 multi-sensor hybrid histidine kinase YP_003100526.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: gbm:Gbem_1372 hypothetical protein YP_003100529.1 KEGG: bcb:BCB4264_A3445 wall-associated protein; TIGRFAM: YD repeat protein; PFAM: PA14 domain protein; YD repeat-containing protein; SMART: PA14 domain protein; LamG domain protein jellyroll fold domain protein YP_003100532.1 PFAM: sugar isomerase (SIS); KEGG: rso:RSc1377 hypothetical protein YP_003100533.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: bpy:Bphyt_2088 major facilitator superfamily MFS_1 YP_003100534.1 KEGG: vei:Veis_0546 GAF sensor protein YP_003100535.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rru:Rru_A3412 amidohydrolase YP_003100536.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bxe:Bxe_A1815 two component LuxR family transcriptional regulator YP_003100537.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mch:Mchl_4713 histidine kinase YP_003100538.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pla:Plav_1100 ABC transporter YP_003100539.1 PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_6766 ABC transporter, permease protein YP_003100540.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003100542.1 KEGG: sdn:Sden_2265 hypothetical protein YP_003100543.1 PFAM: hypothetical protein; hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: sdn:Sden_2266 hypothetical protein YP_003100544.1 PFAM: ROK family protein; KEGG: mxa:MXAN_6549 transcriptional regulator, ROK family YP_003100546.1 KEGG: scl:sce5225 protein kinase YP_003100547.1 KEGG: hypothetical protein YP_003100548.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: mxa:MXAN_3422 copper-translocating P-type ATPase YP_003100549.1 PFAM: copper resistance D domain protein; KEGG: csa:Csal_0081 hypothetical protein YP_003100550.1 PFAM: DSBA oxidoreductase; KEGG: mxa:MXAN_3206 DsbA-like thioredoxin domain protein YP_003100551.1 PFAM: vitamin K epoxide reductase; SMART: vitamin K epoxide reductase; KEGG: scl:sce9005 hypothetical protein YP_003100552.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: bid:Bind_3241 ECF subfamily RNA polymerase sigma-24 factor YP_003100553.1 KEGG: rso:RS02209 transmembrane protein YP_003100554.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcm:Bcenmc03_1936 GCN5-related N- acetyltransferase YP_003100555.1 PFAM: regulatory protein TetR; KEGG: bha:BH2103 hypothetical protein YP_003100556.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bcb:BCB4264_A1961 ABC transporter, permease/ATP-binding protein YP_003100557.1 PFAM: luciferase-like monooxygenase; KEGG: rpb:RPB_4431 coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin YP_003100558.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_1768 TetR family transcriptional regulator YP_003100559.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpn:KPN_00876 DeoR-type transcriptional regulator YP_003100560.1 PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; cellulose-binding family II; SMART: cellulose-binding family II; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B) YP_003100561.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mxa:MXAN_1575 transcriptional regulator, LysR family YP_003100562.1 catalyzes the formation of 2-oxobutanoate from L-threonine YP_003100563.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein YP_003100564.1 PFAM: Aldehyde Dehydrogenase; KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor) YP_003100567.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: rpc:RPC_1740 RNA polymerase sigma factor YP_003100568.1 KEGG: bsu:BSU05430 hypothetical protein YP_003100569.1 PFAM: regulatory protein TetR; KEGG: bav:BAV3196 TetR-family trasncriptional regulator YP_003100571.1 PFAM: GAF domain protein; ANTAR domain protein; SMART: GAF domain protein; KEGG: sus:Acid_4463 GAF sensor protein YP_003100572.1 PFAM: protein of unknown function DUF322; KEGG: bha:BH2786 hypothetical protein YP_003100573.1 KEGG: GH15499 gene product from transcript GH15499- RA YP_003100575.1 PFAM: protein of unknown function DUF322; KEGG: mes:Meso_4196 protein of unknown function DUF1403 YP_003100580.1 PFAM: glycosyl transferase group 1; KEGG: bmn:BMA10247_A2262 glycosyl transferase, group 1 family protein YP_003100581.1 PFAM: GAF domain protein; ANTAR domain protein; SMART: GAF domain protein; KEGG: sus:Acid_4463 GAF sensor protein YP_003100582.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: azo:azo1490 signaling protein YP_003100583.1 KEGG: afw:Anae109_0792 GAF sensor signal transduction histidine kinase YP_003100584.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mag:amb0333 anti-anti-sigma regulatory factor YP_003100585.1 KEGG: hypothetical protein YP_003100587.1 KEGG: GA27442 gene product from transcript GA27442- RA YP_003100588.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: scl:sce5431 two-component system response regulator YP_003100589.1 KEGG: hypothetical protein YP_003100590.1 KEGG: hypothetical protein YP_003100591.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: sus:Acid_5291 methyltransferase type 11 YP_003100592.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: nwi:Nwi_2406 NAD-dependent epimerase/dehydratase YP_003100593.1 PFAM: Radical SAM domain protein; KEGG: bma:BMAA1862 radical SAM domain-containing protein YP_003100594.1 KEGG: smd:Smed_3106 hypothetical protein YP_003100595.1 PFAM: glycosyl transferase group 1; KEGG: scl:sce0549 glycogen synthase YP_003100596.1 PFAM: LmbE family protein; KEGG: dar:Daro_1249 LmbE-like protein YP_003100597.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KR domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short- chain dehydrogenase/reductase SDR; KEGG: bcj:BCAM2033 UDP-glucose 4-epimerase YP_003100598.1 PFAM: phosphoglycerate mutase; KEGG: afr:AFE_0621 phosphoglycerate mutase family protein YP_003100599.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: predicted protein YP_003100600.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mch:Mchl_0500 ABC transporter YP_003100601.1 PFAM: ABC transporter; KEGG: bte:BTH_I2328 transporter YP_003100602.1 PFAM: phosphopantetheine-binding; KEGG: pol:Bpro_3393 AMP-dependent synthetase and ligase YP_003100603.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_2144 NmrA-like family protein YP_003100604.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_2145 transcriptional regulator, TetR family YP_003100605.1 KEGG: smd:Smed_4158 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003100606.1 PFAM: protein of unknown function DUF1680; KEGG: ret:RHE_CH03841 hypothetical protein YP_003100607.1 PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr2244 sugar binding protein of sugar ABC transporter YP_003100608.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein YP_003100609.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:RL4375 transmembrane component of ABC transporter YP_003100610.1 KEGG: hypothetical protein YP_003100611.1 PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein YP_003100612.1 PFAM: glycoside hydrolase family 43; KEGG: scl:sce4598 endo-1,4-beta-xylanase YP_003100613.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: xcv:XCV2729 secreted protein YP_003100614.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bph:Bphy_7397 TAP domain-containing protein YP_003100615.1 PFAM: ethyl tert-butyl ether degradation EthD; KEGG: cak:Caul_5271 ethyl tert-butyl ether degradation EthD YP_003100616.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcr:BCAH187_A5339 transcriptional regulator, MerR family YP_003100617.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: acp:A2cp1_0906 transcriptional regulator, LuxR family YP_003100618.1 PFAM: endoribonuclease L-PSP; KEGG: bja:bll4888 hypothetical protein YP_003100620.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: dvm:DvMF_1479 transcriptional regulator, GntR family YP_003100621.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: rme:Rmet_5039 acetolactate synthase, large subunit YP_003100622.1 KEGG: sal:Sala_2314 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerization domain protein YP_003100623.1 PFAM: luciferase-like monooxygenase; KEGG: rpb:RPB_4411 luciferase-like YP_003100624.1 PFAM: hydantoinase B/oxoprolinase; KEGG: mes:Meso_3732 hydantoinase B/oxoprolinase YP_003100625.1 PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: mno:Mnod_8488 hydantoinase/oxoprolinase YP_003100626.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100063 ABC transporter permease component YP_003100627.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oca:OCAR_6772 ABC transporter YP_003100628.1 PFAM: ABC transporter; transport-associated OB domain protein; SMART: ATPase AAA; KEGG: azc:AZC_2725 ABC transporter ATP-binding protein YP_003100629.1 KEGG: bph:Bphy_6624 extracellular solute-binding protein YP_003100630.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mmw:Mmwyl1_4073 short-chain dehydrogenase/reductase SDR YP_003100631.1 KEGG: hch:HCH_03068 lysophospholipase YP_003100632.1 PFAM: Helix-turn-helix type 11 domain protein; protein of unknown function UPF0074; KEGG: pol:Bpro_0147 helix-turn-helix, type 11 YP_003100633.1 PFAM: major facilitator superfamily MFS_1; KEGG: eum:ECUMN_4826 conserved hypothetical protein mrx YP_003100634.1 PFAM: regulatory protein TetR; KEGG: ccs:CCNA_02884 transcriptional regulator, TetR family YP_003100635.1 KEGG: mxa:MXAN_2224 hypothetical protein YP_003100636.1 KEGG: similar to bromodomain adjacent to zinc finger domain, 1B; K11658 bromodomain adjacent to zinc finger domain protein 1B YP_003100637.1 PFAM: Extracellular ligand-binding receptor; KEGG: cvi:CV_0405 amino acid ABC transporter YP_003100638.1 KEGG: hypothetical protein YP_003100639.1 KEGG: eca:ECA4303 hypothetical protein YP_003100641.1 KEGG: mpo:Mpop_2368 GLUG domain protein YP_003100644.1 TIGRFAM: YD repeat protein; KEGG: ypp:YPDSF_0222 membrane protein YP_003100645.1 PFAM: Domain of unknown function DUF1814; KEGG: scl:sce3078 hydrolase YP_003100646.1 PFAM: Rare lipoprotein A; KEGG: lipoprotein A domain-containing protein YP_003100647.1 PFAM: periplasmic binding protein; KEGG: dsh:Dshi_0573 periplasmic binding protein YP_003100648.1 PFAM: transport system permease protein; KEGG: rce:RC1_3860 hemin transport system permease protein HmuU YP_003100649.1 with HmuTU is involved in the transport of hemin YP_003100650.1 KEGG: cti:RALTA_B2062 conserved hypothetical protein; exported protein YP_003100651.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: Htaa domain protein; KEGG: GJ12556 gene product from transcript GJ12556- RA YP_003100652.1 PFAM: monooxygenase FAD-binding; KEGG: gdj:Gdia_2837 monooxygenase FAD-binding YP_003100653.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bur:Bcep18194_B0744 TetR family transcriptional regulator YP_003100654.1 PFAM: protein of unknown function DUF916 cell surface KEGG: mex:Mext_2409 hypothetical protein YP_003100655.1 KEGG: hypothetical protein YP_003100656.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mpt:Mpe_A2158 phosphoribosylanthranilate isomerase YP_003100657.1 TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein YP_003100658.1 KEGG: YALI0B09867p YP_003100659.1 KEGG: nar:Saro_1805 hypothetical protein YP_003100660.1 PFAM: small multidrug resistance protein; KEGG: pzu:PHZ_c0240 small multidrug resistance protein YP_003100661.1 PFAM: major facilitator superfamily MFS_1; KEGG: sal:Sala_0898 major facilitator transporter YP_003100662.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_0388 TetR family transcriptional regulator YP_003100663.1 KEGG: cell wall protein YP_003100664.1 PFAM: regulatory protein TetR; KEGG: swi:Swit_1768 regulatory protein, TetR YP_003100665.1 PFAM: protein of unknown function DUF1271; KEGG: bxe:Bxe_C0944 ferredoxin YP_003100666.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: met:M446_4600 cyclic nucleotide-binding protein YP_003100667.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003100668.1 PFAM: cytochrome P450; KEGG: CYP55B1; cytochrome P450, nitric oxide reductase YP_003100669.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; glycosyltransferase 28 domain; KEGG: ses:SARI_00205 hypothetical protein YP_003100670.1 PFAM: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bxe:Bxe_A0786 lipoprotein YP_003100671.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcz:pE33L466_0331 MerR family transcriptional regulator YP_003100672.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: reu:Reut_C6231 hypothetical protein YP_003100673.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_3070 TetR family transcriptional regulator YP_003100674.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pen:PSEEN2716 non-ribosomal peptide synthetase YP_003100675.1 KEGG: GD20599 gene product from transcript GD20599- RA YP_003100676.1 PFAM: extracellular solute-binding protein family 5; KEGG: extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein YP_003100677.1 KEGG: efe:EFER_2201 molybdate metabolism regulator (MolR) YP_003100678.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-2 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; KEGG: sml:Smlt2382 two-component sensor histidine kinase protein YP_003100679.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sus:Acid_5974 serine phosphatase YP_003100680.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mag:amb3470 FOG: CheY-like receiver YP_003100682.1 PFAM: helix-turn-helix HxlR type; KEGG: mxa:MXAN_5099 transcriptional regulator YP_003100683.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cak:Caul_1370 short-chain dehydrogenase/reductase SDR YP_003100684.1 KEGG: hypothetical protein LOC686639 YP_003100685.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120663 permease component of ABC transporter YP_003100686.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter membrane spanning protein (sugar); K02025 multiple sugar transport system permease protein YP_003100687.1 PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL120659 substrate-binding component of ABC transporter YP_003100688.1 KEGG: ret:RHE_CH00075 hypothetical protein YP_003100689.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rlt:Rleg2_4009 D-isomer specific 2- hydroxyacid dehydrogenase NAD-binding YP_003100690.1 PFAM: regulatory protein DeoR; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein DeoR; KEGG: ppw:PputW619_1959 LacI family transcription regulator YP_003100691.1 PFAM: conserved hypothetical protein; KEGG: ade:Adeh_2416 hypothetical protein YP_003100692.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003100696.1 KEGG: GM17356 gene product from transcript GM17356- RA YP_003100697.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bcy:Bcer98_1160 two component LuxR family transcriptional regulator YP_003100698.1 PFAM: hypothetical protein; KEGG: ade:Adeh_2230 hypothetical protein YP_003100699.1 KEGG: plu:plu1715 hypothetical protein YP_003100700.1 PFAM: ATPase AAA; SMART: ATPase AAA; KEGG: noc:Noc_1879 ATPase AAA YP_003100701.1 KEGG: aci:ACIAD3520 hypothetical protein YP_003100703.1 PFAM: transcriptional activator domain; TPR repeat- containing protein; hypothetical protein; transcriptional regulator domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce6858 hypothetical protein YP_003100704.1 KEGG: bpy:Bphyt_1629 pseudouridine synthase YP_003100705.1 PFAM: tail sheath protein; KEGG: mlo:mlr6548 hypothetical protein YP_003100706.1 TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0979 hypothetical protein YP_003100707.1 KEGG: gsu:GSU0977 hypothetical protein YP_003100708.1 KEGG: mlo:msr6553 hypothetical protein YP_003100709.1 KEGG: proteophosphoglycan 5 YP_003100710.1 TIGRFAM: conserved hypothetical protein; KEGG: noc:Noc_1873 phage tail region protein YP_003100711.1 PFAM: peptidoglycan-binding LysM; KEGG: gsu:GSU0981 hypothetical protein YP_003100712.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: gbm:Gbem_2550 rhs element Vgr protein YP_003100713.1 PFAM: hypothetical protein; KEGG: sde:Sde_1043 hypothetical protein YP_003100714.1 PFAM: GPW/gp25 family protein; KEGG: gsu:GSU0986 tail lysozyme YP_003100715.1 KEGG: gsu:GSU0988 hypothetical protein YP_003100716.1 TIGRFAM: phage tail protein; KEGG: rsq:Rsph17025_4353 hypothetical protein YP_003100717.1 KEGG: similar to Enabled protein homolog; K05746 enabled YP_003100718.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mgm:Mmc1_2871 NAD-dependent epimerase/dehydratase YP_003100719.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bcy:Bcer98_0214 two component LuxR family transcriptional regulator YP_003100721.1 PFAM: transcriptional activator domain; hypothetical protein; transcriptional regulator domain protein; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003100722.1 KEGG: bbr:BB2134 hypothetical protein YP_003100723.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: bpm:BURPS1710b_1102 lipoprotein YP_003100724.1 PFAM: UspA domain protein; KEGG: hha:Hhal_2190 UspA domain protein YP_003100726.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pat:Patl_1928 NADH:flavin oxidoreductase/NADH oxidase YP_003100728.1 KEGG: cvi:CV_3666 acetyltransferase YP_003100729.1 KEGG: GM10273 gene product from transcript GM10273- RA YP_003100731.1 KEGG: cti:RALTA_A1696 DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD- dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003100732.1 KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003100733.1 PFAM: aminotransferase class I and II; KEGG: dvl:Dvul_2797 aminotransferase, class I and II YP_003100734.1 KEGG: xca:xccb100_4160 secreted hydrolase YP_003100735.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mpt:Mpe_A0358 two-component sensor histidine kinase-like protein YP_003100736.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: sde:Sde_0644 hypothetical protein YP_003100737.1 KEGG: hypothetical protein; K10592 E3 ubiquitin- protein ligase HUWE1 YP_003100738.1 PFAM: xylose isomerase; KEGG: lch:Lcho_4327 xylose isomerase domain- containing protein YP_003100739.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: rec:RHECIAT_CH0002098 dehydrogenase protein YP_003100740.1 PFAM: regulatory protein TetR; KEGG: pst:PSPTO_3319 TetR family transcriptional regulator YP_003100742.1 PFAM: NUDIX hydrolase; KEGG: bce:BC3339 phosphohydrolase (MutT/NUDIX family protein) YP_003100743.1 PFAM: regulatory protein TetR; KEGG: psb:Psyr_3154 regulatory protein, TetR YP_003100744.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: beta-glucosidase-related glycosidases YP_003100745.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: floR; florfenicol/chloramphenicol resistance transporter protein YP_003100746.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein YP_003100747.1 PFAM: protein of unknown function DUF1684; KEGG: acp:A2cp1_0109 protein of unknown function DUF1684 YP_003100748.1 KEGG: eli:ELI_10905 hypothetical protein YP_003100749.1 PFAM: extracellular solute-binding protein family 1; KEGG: sugar ABC transporter YP_003100750.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sugar ABC transporter; K02025 multiple sugar transport system permease protein YP_003100751.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rec:RHECIAT_PC0000203 sugar ABC transporter, permease protein YP_003100752.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_003100753.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mmr:Mmar10_0065 ArsR family transcriptional regulator YP_003100754.1 PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bam:Bamb_4929 LacI family transcription regulator YP_003100756.1 KEGG: bcb:BCB4264_A3230 hypothetical cytosolic protein YP_003100757.1 KEGG: dol:Dole_2720 hypothetical protein YP_003100758.1 PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator protein YP_003100759.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: acp:A2cp1_1436 methyltransferase type 11 YP_003100760.1 KEGG: hch:HCH_03879 hypothetical protein YP_003100762.1 PFAM: alpha/beta hydrolase fold; KEGG: bcj:BCAM1529 hydrolase YP_003100763.1 PFAM: protein of unknown function DUF664 YP_003100764.1 PFAM: methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S- methyltransferase; methyltransferase type 12; KEGG: methyltransferase type 12 YP_003100765.1 PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: reh:H16_B1998 transcriptional regulator, XRE- family YP_003100766.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc0215 short chain dehydrogenase YP_003100767.1 PFAM: regulatory protein TetR; KEGG: afw:Anae109_0884 TetR family transcriptional regulator YP_003100768.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: tmz:Tmz1t_2342 exonuclease RNase T and DNA polymerase III YP_003100769.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: cja:CJA_2025 MerR-family transcriptional regulator YP_003100770.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100771.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100772.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit YP_003100773.1 PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1312 hypothetical protein YP_003100774.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; PglZ domain protein; KEGG: tbd:Tbd_1468 hypothetical protein YP_003100775.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: lch:Lcho_3323 alpha amylase catalytic region YP_003100776.1 KEGG: pag:PLES_32071 hypothetical protein YP_003100777.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: afw:Anae109_2808 NADP oxidoreductase coenzyme F420-dependent YP_003100778.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_0873 TetR family transcriptional regulator YP_003100781.1 PFAM: sodium/calcium exchanger membrane region; KEGG: dvl:Dvul_0633 sodium/calcium exchanger membrane region YP_003100782.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; siderophore-interacting protein; KEGG: pag:PLES_28941 SIP YP_003100783.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: phenazine biosynthesis PhzC/PhzF protein; KEGG: acr:Acry_0325 PhzF family phenazine biosynthesis protein YP_003100784.1 PFAM: regulatory protein TetR; KEGG: bmu:Bmul_5991 TetR family transcriptional regulator YP_003100785.1 PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: rsp:RSP_3069 NADPH-dependent FMN reductase YP_003100786.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003100788.1 KEGG: gme:Gmet_1196 PASTA YP_003100789.1 PFAM: inositol monophosphatase; KEGG: mgm:Mmc1_0078 inositol-phosphate phosphatase YP_003100790.1 PFAM: ABC transporter transmembrane protein; ABC transporter; KEGG: mpo:Mpop_2313 lipid A ABC exporter family, fused ATPase and inner membrane subunits YP_003100791.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: maq:Maqu_2187 ABC transporter YP_003100792.1 PFAM: glycoside hydrolase family 12; KEGG: bja:blr1964 hypothetical protein YP_003100793.1 KEGG: xcb:XC_4318 avirulence protein YP_003100794.1 KEGG: similar to DNA Helicase YP_003100796.1 PFAM: GCN5-related N-acetyltransferase; KEGG: swi:Swit_1410 GCN5-related N- acetyltransferase YP_003100797.1 KEGG: rsh:Rsph17029_3222 hypothetical protein YP_003100798.1 PFAM: endonuclease/exonuclease/phosphatase; phosphoesterase HXTX; DNA polymerase beta domain protein region; KEGG: scl:sce0152 polynucleotide adenyltransferase YP_003100799.1 KEGG: rle:RL3033 hypothetical protein YP_003100801.1 PFAM: protein of unknown function DUF162; KEGG: eba:ebA3914 hypothetical protein YP_003100802.1 PFAM: protein of unknown function DUF162; KEGG: rru:Rru_A1412 4Fe-4S ferredoxin, iron-sulfur binding YP_003100803.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: sus:Acid_5763 hypothetical protein YP_003100804.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: scl:sce0751 GntR family transcriptional regulator YP_003100805.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ppw:PputW619_1959 LacI family transcription regulator YP_003100806.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bph:Bphy_3463 ABC transporter YP_003100807.1 PFAM: inner-membrane translocator; KEGG: bac:BamMC406_1213 monosaccharide-transporting ATPase YP_003100808.1 PFAM: inner-membrane translocator; KEGG: bxe:Bxe_B1037 ABC sugar transporter, inner membrane subunit YP_003100809.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; KEGG: bph:Bphy_3460 rhamnose ABC transporter, periplasmic rhamnose-binding protein YP_003100810.1 TIGRFAM: L-rhamnose isomerase; PFAM: xylose isomerase; KEGG: acr:Acry_2987 L-rhamnose isomerase YP_003100811.1 TIGRFAM: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: class II aldolase/adducin family protein; KR domain protein; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: rde:RD1_3083 short chain dehydrogenase YP_003100812.1 PFAM: carbohydrate kinase FGGY; KEGG: sus:Acid_3424 carbohydrate kinase, FGGY YP_003100813.1 KEGG: smt:Smal_1180 glyoxalase/bleomycin resistance protein/dioxygenase YP_003100814.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: azc:AZC_1412 hypothetical protein YP_003100815.1 KEGG: mpo:Mpop_1143 hypothetical protein YP_003100816.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_0276 transcriptional regulator, LysR family YP_003100817.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100818.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr3851 TetR family transcriptional regulator YP_003100819.1 KEGG: hypothetical protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_003100820.1 KEGG: ses:SARI_03963 hypothetical protein YP_003100821.1 PFAM: protein of unknown function DUF202; KEGG: pmy:Pmen_1718 hypothetical protein YP_003100822.1 PFAM: cytochrome P450; KEGG: mlo:mll6125 cytochrome P450-family protein YP_003100823.1 SMART: regulatory protein ArsR; KEGG: ade:Adeh_4096 serine/threonine protein kinase YP_003100825.1 PFAM: Haem oxygenase-like; KEGG: rpa:RPA1539 heme oxygenase (decyclizing) YP_003100826.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bha:BH2806 carboxylesterase YP_003100827.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bcb:BCB4264_A2458 hypothetical protein YP_003100828.1 PFAM: extracellular solute-binding protein family 5; KEGG: dde:Dde_1329 dipeptide ABC transporter, solute-binding protein YP_003100829.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1328 dipeptide ABC transporter, permease protein YP_003100830.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dde:Dde_1327 dipeptide ABC transporter, permease protein YP_003100831.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1326 ATPase YP_003100832.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dde:Dde_1325 ATPase YP_003100833.1 KEGG: scl:sce4939 hypothetical protein; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003100835.1 KEGG: mgm:Mmc1_2162 hypothetical protein YP_003100836.1 PFAM: small multidrug resistance protein; KEGG: acr:Acry_0986 small multidrug resistance protein YP_003100837.1 PFAM: aminotransferase class-III; KEGG: rsq:Rsph17025_3685 hypothetical protein YP_003100838.1 PFAM: aminotransferase class-III; KEGG: aba:Acid345_3989 4-aminobutyrate aminotransferase YP_003100839.1 PFAM: Aldehyde Dehydrogenase; KEGG: sfu:Sfum_2203 aldehyde dehydrogenase YP_003100840.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine YP_003100841.1 PFAM: O-methyltransferase; KEGG: mxa:MXAN_2296 O-methyltransferase family protein YP_003100842.1 PFAM: beta-lactamase; KEGG: aba:Acid345_4043 beta-lactamase YP_003100844.1 KEGG: mex:Mext_2409 hypothetical protein YP_003100846.1 PFAM: conserved hypothetical protein; KEGG: ade:Adeh_0726 hypothetical protein YP_003100847.1 KEGG: mrd:Mrad2831_6137 transposase YP_003100848.1 PFAM: endoribonuclease L-PSP; KEGG: mms:mma_1646 hypothetical protein YP_003100849.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc2325 transcription regulator protein YP_003100850.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003100851.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: kpe:KPK_2589 transcriptional regulator, LysR family YP_003100852.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: hypothetical protein YP_003100853.1 SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003100854.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmv:BMASAVP1_A0386 transporter YP_003100856.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dal:Dalk_3679 transcriptional regulator, ArsR family YP_003100857.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afe:Lferr_0209 heavy metal translocating P- type ATPase YP_003100858.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aba:Acid345_3929 HAD-superfamily hydrolase subfamily IA, variant 3 YP_003100859.1 PFAM: ROK family protein; KEGG: sme:SMa2303 ROK family transcriptional regulator YP_003100861.1 KEGG: ade:Adeh_0992 Vgr-related protein YP_003100862.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_003100863.1 KEGG: bha:BH3300 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003100864.1 KEGG: dal:Dalk_4624 hypothetical protein YP_003100866.1 PFAM: Ricin B lectin; glycoside hydrolase clan GH- D; SMART: Ricin B lectin; KEGG: cak:Caul_2129 alpha-galactosidase YP_003100867.1 PFAM: protein of unknown function DUF1680; Ricin B lectin; KEGG: hypothetical protein YP_003100868.1 PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein YP_003100869.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: eta:ETA_13590 flavoprotein monooxygenase YP_003100870.1 PFAM: aminotransferase class I and II; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mxa:MXAN_2571 aminotransferase, class II YP_003100871.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bav:BAV1824 transcriptional regulator YP_003100872.1 KEGG: similar to ODAG protein YP_003100873.1 KEGG: xcb:XC_2636 plasmid-related protein YP_003100874.1 KEGG: bps:BPSL0769 hypothetical protein YP_003100875.1 KEGG: xcb:XC_2635 hypothetical protein YP_003100877.1 PFAM: regulatory protein TetR; KEGG: dol:Dole_0928 TetR family transcriptional regulator YP_003100878.1 PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: mlo:mlr0239 hypothetical protein YP_003100879.1 PFAM: luciferase-like monooxygenase; KEGG: swi:Swit_2098 luciferase family protein YP_003100880.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: xau:Xaut_2796 cyclic nucleotide-binding protein YP_003100882.1 KEGG: mxa:MXAN_5493 WD domain G-beta repeat protein YP_003100883.1 KEGG: hne:HNE_0890 TRAP dicarboxylate transporter, DctM subunit YP_003100884.1 KEGG: mxa:MXAN_6144 oxygen-dependent FAD- linked oxidoreductase YP_003100885.1 PFAM: FAD linked oxidase domain protein; KEGG: mxa:MXAN_6144 oxygen-dependent FAD- linked oxidoreductase YP_003100886.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: scl:sce1114 LysR family transcriptional regulator YP_003100887.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; KEGG: scl:sce8821 hypothetical protein YP_003100888.1 KEGG: dal:Dalk_3308 acyl carrier protein YP_003100889.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; KEGG: gdi:GDI3075 3-oxoacyl-[acyl-carrier- protein] synthase 3 (3-oxoacyl [acyl-carrier-protein] synthase III) (beta-ketoacyl-ACP synthase III (KAS III) YP_003100890.1 PFAM: cytochrome P450; KEGG: mxa:MXAN_3943 cytochrome P450 family protein YP_003100891.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: bpy:Bphyt_6246 3-oxoacyl-(acyl-carrier- protein (ACP)) synthase III domain protein YP_003100892.1 PFAM: aminotransferase class-III; protein of unknown function RIO1; aminoglycoside phosphotransferase; ABC-1 domain protein; KEGG: sus:Acid_1674 aminotransferase YP_003100893.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bur:Bcep18194_C6793 beta-hydroxyacid dehydrogenase YP_003100894.1 KEGG: mpo:Mpop_0225 hypothetical protein YP_003100895.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ret:RHE_PE00158 methyltransferase protein YP_003100897.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: 3-oxoacyl-(acyl-carrier-protein) reductase protein; K00059 3-oxoacyl- YP_003100898.1 PFAM: regulatory protein TetR; KEGG: bid:Bind_1892 TetR family transcriptional regulator YP_003100899.1 PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase; KEGG: bur:Bcep18194_C6861 fructose-bisphosphate aldolase YP_003100900.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: reu:Reut_C6082 zinc-containing alcohol dehydrogenase superfamily protein YP_003100901.1 PFAM: regulatory protein TetR; KEGG: scl:sce6308 TetR family transcriptional regulator YP_003100902.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: esa:ESA_00979 hypothetical protein YP_003100903.1 PFAM: B3/4 domain protein; KEGG: hypothetical protein YP_003100904.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003100905.1 PFAM: regulatory protein TetR; KEGG: bat:BAS4873 transcriptional regulator YP_003100906.1 PFAM: ThiJ/PfpI domain protein; KEGG: pfo:Pfl01_1835 ThiJ/PfpI YP_003100907.1 PFAM: abortive infection protein; KEGG: sdn:Sden_1909 abortive infection protein YP_003100908.1 PFAM: arsenical pump membrane protein; Citrate transporter; KEGG: bvi:Bcep1808_6442 arsenical pump membrane protein YP_003100909.1 PFAM: metallophosphoesterase; KEGG: rpi:Rpic_2954 metallophosphoesterase YP_003100910.1 PFAM: regulatory protein TetR; KEGG: bid:Bind_0033 TetR family transcriptional regulator YP_003100911.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3022 hypothetical protein YP_003100914.1 KEGG: mes:Meso_2703 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP- cone domain protein; ribonucleotide reductase large subunit domain protein YP_003100915.1 PFAM: ribonucleotide reductase; KEGG: oca:OCAR_6755 ribonucleoside-diphosphate reductase, beta subunit YP_003100916.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: bcb:BCB4264_A1874 transport protein, NRAMP family YP_003100917.1 PFAM: protein of unknown function DUF955; helix- turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ppd:Ppro_0104 helix-turn-helix domain- containing protein YP_003100919.1 PFAM: MMPL domain protein; KEGG: bsu:BSU05430 hypothetical protein YP_003100920.1 PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce8862 BKRF1 encodes EBNA-1 protein, latent cycle gene YP_003100921.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist YP_003100922.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: acr:Acry_0624 enoyl-CoA hydratase/isomerase YP_003100923.1 KEGG: pzu:PHZ_p0176 hypothetical protein YP_003100926.1 KEGG: kpn:KPN_01215 ABC transporter membrane protein YP_003100927.1 KEGG: hypothetical protein YP_003100928.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein YP_003100929.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_4515 TetR family transcriptional regulator YP_003100930.1 KEGG: mca:MCA1086 hypothetical protein YP_003100931.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: neu:NE0720 ABC transporter permease/ATP- binding protein YP_003100932.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_0260 cation transporter/universal stress family protein YP_003100933.1 KEGG: cak:Caul_0156 ricin B lectin YP_003100934.1 PFAM: O-methyltransferase; KEGG: mno:Mnod_7639 O-methyltransferase YP_003100935.1 PFAM: regulatory protein LuxR; hypothetical protein; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: GK24882 gene product from transcript GK24882- RA YP_003100936.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; erythronolide synthase docking; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_4527 polyketide synthase YP_003100937.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; erythronolide synthase docking; NAD- dependent epimerase/dehydratase; phosphopantetheine- binding; KEGG: met:M446_0170 beta-ketoacyl synthase YP_003100938.1 PFAM: N-acetyltransferase; KEGG: mxa:MXAN_1194 N-acetyltransferase family protein YP_003100939.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase; KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 YP_003100940.1 PFAM: monooxygenase FAD-binding; KEGG: gbe:GbCGDNIH1_1787 hypothetical protein YP_003100941.1 PFAM: tryptophan halogenase; monooxygenase FAD- binding; FAD dependent oxidoreductase; KEGG: scl:sce7303 dehyrogenase YP_003100942.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bid:Bind_3102 3-hydroxybutyryl-CoA dehydrogenase YP_003100943.1 KEGG: gbm:Gbem_0719 hypothetical protein YP_003100944.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: hch:HCH_03452 acyl-CoA dehydrogenase YP_003100945.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: nmu:Nmul_A2515 FkbH domain-containing protein YP_003100946.1 PFAM: O-methyltransferase; KEGG: rce:RC1_1081 O-methyltransferase YP_003100947.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: sme:SMa0464 adenylate/guanylate cyclase YP_003100948.1 PFAM: acyltransferase 3; KEGG: acp:A2cp1_3016 acyltransferase 3 YP_003100949.1 PFAM: YCII-related; KEGG: bja:bll6613 hypothetical protein YP_003100950.1 PFAM: carbamoyltransferase; KEGG: mlo:mlr6171 nodulation protein NolO YP_003100952.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_003100953.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rpb:RPB_2068 DegT/DnrJ/EryC1/StrS aminotransferase YP_003100954.1 PFAM: acyl transferase; AMP-dependent synthetase and ligase; beta-ketoacyl synthase; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: met:M446_0172 beta-ketoacyl synthase YP_003100955.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003100956.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; KEGG: cak:Caul_2842 glycosyl transferase family protein YP_003100957.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: ank:AnaeK_2751 short-chain dehydrogenase/reductase SDR YP_003100958.1 KEGG: sde:Sde_2765 TonB-dependent siderophore receptor YP_003100959.1 PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C6787 TetR family transcriptional regulator YP_003100960.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: bha:BH1376 RNA polymerase sigma factor RpoD YP_003100961.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sil:SPO3211 hypothetical protein YP_003100962.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mxa:MXAN_1250 RibD domain protein YP_003100963.1 PFAM: regulatory protein TetR; KEGG: psa:PST_0620 hypothetical protein YP_003100964.1 KEGG: scl:sce8854 secreted protein YP_003100965.1 KEGG: rce:RC1_3059 hypothetical protein YP_003100966.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: noc:Noc_1128 protocatechuate 3 4-dioxygenase beta subunit like protein YP_003100967.1 PFAM: glycoside hydrolase family 43; carbohydrate binding family 6; SMART: cellulose binding type IV; KEGG: hypothetical protein YP_003100968.1 KEGG: XylD; endoxylanase D; PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II YP_003100969.1 PFAM: glycoside hydrolase family 6; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: mxa:MXAN_4837 endoglucanase YP_003100970.1 PFAM: glycoside hydrolase family 5; Fibronectin type III domain protein; cellulose-binding family II; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: azc:AZC_1301 endoglucanase YP_003100971.1 PFAM: proteinase inhibitor I13 potato inhibitor I; KEGG: similar to chymotrypsin inhibitor 2 YP_003100972.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003100973.1 PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003100974.1 KEGG: pap:PSPA7_2550 hypothetical protein YP_003100975.1 KEGG: rde:RD1_3606 hypothetical protein YP_003100976.1 PFAM: cellulose-binding family II; Spore coat protein CotH; SMART: cellulose-binding family II; KEGG: scl:sce0771 hypothetical protein YP_003100977.1 PFAM: VanZ family protein YP_003100978.1 KEGG: hne:HNE_2077 hypothetical protein YP_003100979.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpy:Bphyt_6660 short-chain dehydrogenase/reductase SDR YP_003100980.1 PFAM: aldo/keto reductase; KEGG: spe:Spro_1178 aldo/keto reductase YP_003100981.1 SMART: helix-turn-helix domain protein; KEGG: sml:Smlt2229 hypothetical protein YP_003100982.1 PFAM: Osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; UspA domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mno:Mnod_0197 osmosensitive K+ channel signal transduction histidine kinase YP_003100983.1 PFAM: K transporting ATPase KdpC subunit; KEGG: xop:PXO_04385 K+-transporting ATPase, C subunit YP_003100984.1 TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: sus:Acid_0074 K+-transporting ATPase, B subunit YP_003100985.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_003100986.1 TIGRFAM: K+-transporting ATPase, F subunit YP_003100987.1 KEGG: sus:Acid_1791 amino acid transporter YP_003100988.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bcy:Bcer98_1141 diaminopimelate decarboxylase YP_003100989.1 PFAM: ATP-binding region ATPase domain protein; KEGG: ade:Adeh_0021 periplasmic sensor signal transduction histidine kinase YP_003100990.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sfu:Sfum_4033 anti-sigma-factor antagonist YP_003100991.1 KEGG: jan:Jann_4076 secreted protein YP_003100992.1 PFAM: protein of unknown function DUF218; KEGG: bat:BAS4694 hypothetical protein YP_003100993.1 PFAM: Recombinase; KEGG: bca:BCE_4599 DNA recombinase YP_003100997.1 PFAM: glycoside hydrolase family 25; peptidoglycan- binding LysM; SMART: peptidoglycan-binding LysM; glycoside hydrolase family 25; KEGG: mxa:MXAN_7387 chitinase, class I YP_003100998.1 KEGG: ade:Adeh_2705 response regulator receiver YP_003100999.1 KEGG: rso:RS05070 hemagglutinin/hemolysin- related protein YP_003101001.1 KEGG: bce:BC1906 phage protein YP_003101002.1 KEGG: rsp:RSP_3854 ICE nucleation protein YP_003101012.1 KEGG: bbt:BBta_5785 phage major head protein YP_003101014.1 KEGG: hypothetical protein YP_003101015.1 PFAM: protein of unknown function DUF1483 YP_003101017.1 PFAM: terminase; KEGG: bca:BCE_0397 phage terminase, large subunit YP_003101018.1 TIGRFAM: phage terminase, small subunit, P27 family; PFAM: terminase small subunit P27; KEGG: rsh:Rsph17029_0646 P27 family phage terminase small subunit YP_003101023.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003101025.1 PFAM: aminoglycoside phosphotransferase YP_003101026.1 PFAM: methyltransferase type 11; Cyclopropane-fatty- acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: hypothetical protein YP_003101027.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; Cyclopropane-fatty-acyl-phospholipid synthase; methyltransferase type 12; KEGG: hypothetical protein YP_003101028.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003101029.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003101030.1 PFAM: O-methyltransferase; KEGG: rce:RC1_1081 O-methyltransferase YP_003101031.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: aba:Acid345_4328 3-hydroxyacyl-CoA dehydrogenase YP_003101032.1 KEGG: gbm:Gbem_0719 hypothetical protein YP_003101033.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: hch:HCH_03452 acyl-CoA dehydrogenase YP_003101034.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: nmu:Nmul_A2515 FkbH domain-containing protein YP_003101035.1 PFAM: carbamoyltransferase; KEGG: mlo:mlr6171 nodulation protein NolO YP_003101036.1 KEGG: mag:amb2610 O-linked N-acetylglucosamine transferase YP_003101037.1 PFAM: ROK family protein; KEGG: met:M446_2296 ROK family protein YP_003101038.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_003101039.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: rpb:RPB_2068 DegT/DnrJ/EryC1/StrS aminotransferase YP_003101040.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; KEGG: rpb:RPB_2066 oxidoreductase-like YP_003101041.1 TIGRFAM: AHBA synthesis associated protein; HAD- superfamily hydrolase, subfamily IA, variant 3; HAD- superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rpb:RPB_2065 HAD-superfamily hydrolase YP_003101042.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate YP_003101043.1 PFAM: N-acetyltransferase; KEGG: si:rp71-1f1.6 YP_003101044.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; beta-ketoacyl synthase; acyl transferase; alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: met:M446_0172 beta-ketoacyl synthase YP_003101045.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; erythronolide synthase docking; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: mxa:MXAN_4527 polyketide synthase YP_003101046.1 PFAM: acyl transferase; AMP-dependent synthetase and ligase; beta-ketoacyl synthase; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I YP_003101048.1 PFAM: 3-dehydroquinate synthase; KEGG: gsu:GSU2025 3-dehydroquinate synthase YP_003101049.1 PFAM: regulatory protein LuxR; hypothetical protein; SMART: regulatory protein LuxR; KEGG: vei:Veis_2932 regulatory protein, LuxR YP_003101050.1 PFAM: GCN5-related N-acetyltransferase; KEGG: GNAT family acetyltransferase YP_003101051.1 SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003101052.1 KEGG: aav:Aave_4523 superoxide dismutase YP_003101053.1 PFAM: glycoside hydrolase family 62; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: glycosyl hydrolase family 62 protein YP_003101054.1 PFAM: glycoside hydrolase family 43; KEGG: xylosidase/glycosyl hydrolase YP_003101055.1 PFAM: glycoside hydrolase family 62; cellulose- binding family II; SMART: cellulose-binding family II; KEGG: hypothetical protein YP_003101056.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bur:Bcep18194_B2373 LacI family transcription regulator YP_003101057.1 KEGG: mxa:MXAN_1686 acetyltransferase, GNAT family YP_003101058.1 PFAM: regulatory protein TetR; KEGG: bcy:Bcer98_3256 TetR family transcriptional regulator YP_003101059.1 PFAM: isochorismatase hydrolase; KEGG: bxe:Bxe_C0259 isochorismatase hydrolase family protein YP_003101060.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: scl:sce5225 protein kinase YP_003101061.1 KEGG: scl:sce8587 hypothetical protein YP_003101062.1 PFAM: regulatory protein TetR; KEGG: bid:Bind_1892 TetR family transcriptional regulator YP_003101063.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: short-chain oxidoreductase protein YP_003101064.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bcm:Bcenmc03_4438 4-oxalocrotonate tautomerase YP_003101065.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mes:Meso_4307 bifunctional deaminase- reductase-like YP_003101066.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003101067.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003101068.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: atu:Atu2171 hydrolase YP_003101069.1 KEGG: eli:ELI_05955 beta-lactamase YP_003101071.1 KEGG: dvm:DvMF_2570 hypothetical protein YP_003101072.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: dde:Dde_0483 ATPase YP_003101073.1 KEGG: rsq:Rsph17025_0280 sporulation domain- containing protein YP_003101075.1 PFAM: regulatory protein MarR; KEGG: scl:sce6114 hypothetical protein YP_003101076.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: sus:Acid_0469 peptidase S9B dipeptidylpeptidase IV subunit YP_003101077.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: aeh:Mlg_1632 AraC family transcriptional regulator YP_003101078.1 PFAM: asparagine synthase; KEGG: swi:Swit_4548 asparagine synthase YP_003101080.1 KEGG: cak:Caul_5192 hypothetical protein YP_003101082.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pfl:PFL_2250 transcriptional activator FtrA YP_003101083.1 PFAM: cupin; KEGG: bja:blr5564 hypothetical protein YP_003101084.1 PFAM: regulatory protein TetR; KEGG: bid:Bind_0033 TetR family transcriptional regulator YP_003101085.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR YP_003101086.1 PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; KEGG: bha:BH0603 endo-beta-1,4-glucanase (celulase B) YP_003101087.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH0482 lipoprotein YP_003101088.1 KEGG: aav:Aave_4199 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003101089.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: scl:sce8968 nucleotide-diphosphate-sugar epimerase YP_003101090.1 PFAM: helix-turn-helix HxlR type; KEGG: aav:Aave_1296 transcriptional regulator, HxlR family YP_003101093.1 PFAM: alpha/beta hydrolase fold; KEGG: pzu:PHZ_c1878 hypothetical protein YP_003101096.1 PFAM: alpha/beta hydrolase fold; KEGG: bat:BAS3592 alpha/beta fold family hydrolase YP_003101097.1 KEGG: sus:Acid_6922 natural resistance-associated macrophage protein YP_003101098.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: rso:RS05496 oxidoreductase protein YP_003101099.1 KEGG: afw:Anae109_3772 hypothetical protein YP_003101100.1 PFAM: carboxylesterase type B; KEGG: swi:Swit_1148 carboxylesterase, type B YP_003101101.1 PFAM: beta-lactamase domain protein; KEGG: nar:Saro_2457 beta-lactamase-like YP_003101103.1 PFAM: TAP domain protein; KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit YP_003101104.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003101105.1 PFAM: GCN5-related N-acetyltransferase; KEGG: swi:Swit_3205 GCN5-related N- acetyltransferase YP_003101107.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bid:Bind_1144 alcohol dehydrogenase YP_003101108.1 PFAM: regulatory protein TetR; KEGG: scl:sce7471 TetR family transcriptional regulator YP_003101109.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bac:BamMC406_4517 GCN5-related N- acetyltransferase YP_003101110.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mlo:mlr0926 hypothetical protein YP_003101111.1 PFAM: aldo/keto reductase; KEGG: bxe:Bxe_B0085 norsolorinic acid reductase YP_003101112.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7080 AraC family transcriptional regulator YP_003101114.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: mno:Mnod_8717 D-xylulose 5-phosphate/D- fructose 6-phosphate phosphoketolase YP_003101115.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: bsu:BSU29470 acetate kinase YP_003101117.1 PFAM: NUDIX hydrolase; KEGG: oan:Oant_1677 NUDIX hydrolase YP_003101120.1 KEGG: ccv:CCV52592_2062 hypothetical protein YP_003101122.1 PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: scl:sce2120 pyruvate decarboxylase YP_003101123.1 PFAM: alcohol dehydrogenase GroES domain protein; KEGG: noc:Noc_0592 zinc-containing alcohol dehydrogenase superfamily protein YP_003101124.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: spe:Spro_1223 glycoside hydrolase family protein YP_003101125.1 PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_3232 major facilitator superfamily MFS_1 YP_003101126.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: smt:Smal_0276 transcriptional regulator, LysR family YP_003101127.1 KEGG: hypothetical protein YP_003101128.1 PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: atc:AGR_L_1215 hypothetical protein YP_003101129.1 KEGG: atu:Atu4253 hypothetical protein YP_003101130.1 PFAM: hydantoinase/oxoprolinase; hydantoinaseoxoprolinase domain protein; KEGG: scl:sce2622 N-methylhydantoinase A, beta subunit YP_003101132.1 PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: azc:AZC_1182 H+/citrate symporter YP_003101133.1 KEGG: Muc19; mucin 19 YP_003101134.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH- dependent FMN reductase; KEGG: aav:Aave_3540 NAD(P)H dehydrogenase (quinone) YP_003101135.1 PFAM: regulatory protein TetR; KEGG: bpt:Bpet2251 TetR family transcriptional regulator YP_003101136.1 PFAM: GCN5-related N-acetyltransferase; KEGG: scl:sce1138 acetyltransferase YP_003101138.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF471; protein of unknown function DUF472; KEGG: acp:A2cp1_1693 protein of unknown function DUF470 YP_003101139.1 PFAM: esterase; KEGG: bcm:Bcenmc03_5695 esterase YP_003101141.1 PFAM: Amidohydrolase 3; KEGG: rce:RC1_3136 amidohydrolase family protein YP_003101142.1 KEGG: mxa:MXAN_4385 beta-alanyl-CoA:ammonia lyase YP_003101143.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bcy:Bcer98_1077 regulatory protein GntR HTH YP_003101144.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: mxa:MXAN_2794 transcriptional regulator, TetR family YP_003101145.1 PFAM: PspC domain protein; KEGG: xom:XOO_2087 hypothetical protein YP_003101146.1 PFAM: glycosyl transferase family 2; KEGG: ank:AnaeK_2710 glycosyl transferase family 2 YP_003101148.1 PFAM: NUDIX hydrolase; KEGG: nha:Nham_1987 NUDIX hydrolase YP_003101150.1 KEGG: hypothetical protein YP_003101151.1 PFAM: helix-turn-helix domain protein; cupin; SMART: helix-turn-helix domain protein; KEGG: scl:sce6511 transcriptional regulator YP_003101152.1 catalyzes the formation of thymidine 5'-phosphate from thymidine YP_003101153.1 PFAM: transcriptional regulator PadR family protein; KEGG: sus:Acid_0652 PadR family transcriptional regulator YP_003101154.1 KEGG: ret:RHE_CH02708 hypothetical protein YP_003101155.1 PFAM: major facilitator superfamily MFS_1; KEGG: pca:Pcar_1854 major facilitator superfamily permease/BtlA-like YP_003101156.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rce:RC1_2887 glycerophosphoryl diester phosphodiesterase YP_003101157.1 KEGG: scl:sce6697 transcriptional regulator YP_003101158.1 KEGG: tbd:Tbd_2428 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003101159.1 KEGG: she:Shewmr4_3786 glyoxalase/bleomycin resistance protein/dioxygenase YP_003101160.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003101161.1 KEGG: afw:Anae109_1008 Ku family containing protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein YP_003101162.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hne:HNE_3215 acetyltransferase YP_003101164.1 PFAM: protein of unknown function DUF107; KEGG: sfu:Sfum_2309 protein of unknown function DUF107 YP_003101165.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bcy:Bcer98_1560 hypothetical protein YP_003101167.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hha:Hhal_1112 regulatory protein, ArsR YP_003101168.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: arsenical-resistance protein precursor; K03325 arsenite transporter, ACR3 family YP_003101169.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: arsenate reductase ArsC; K03741 arsenate reductase YP_003101170.1 KEGG: bph:Bphy_3936 zinc finger SWIM domain- containing protein YP_003101171.1 PFAM: ANTAR domain protein YP_003101172.1 PFAM: amidase; KEGG: met:M446_0555 amidase YP_003101173.1 KEGG: mag:amb0998 hypothetical protein YP_003101174.1 KEGG: ppg:PputGB1_1457 hypothetical protein YP_003101175.1 PFAM: protein of unknown function DUF1470; KEGG: jan:Jann_2411 hypothetical protein YP_003101177.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_2880 TetR family transcriptional regulator YP_003101179.1 KEGG: hypothetical protein YP_003101180.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azc:AZC_4194 dehydrogenases YP_003101181.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: ank:AnaeK_1955 methionine aminopeptidase, type I YP_003101182.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mxa:MXAN_2709 transcriptional regulator YP_003101183.1 PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; protein of unknown function UPF0074; SMART: regulatory protein DeoR; KEGG: scl:sce5223 DeoR family transcriptional regulator YP_003101184.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bbt:BBta_2587 monoxygenase YP_003101185.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: kpe:KPK_3034 transcriptional regulator, DeoR family YP_003101186.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein LOC100149318 YP_003101188.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: scl:sce7572 DNA polymerase III, epsilon subunit YP_003101190.1 PFAM: integrase family protein; KEGG: mag:amb4250 site-specific tyrosine recombinase XerC YP_003101191.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce1871 AraC family transcriptional regulator YP_003101192.1 KEGG: cvi:CV_3295 hypothetical protein YP_003101196.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: msl:Msil_1579 peptidase S9 prolyl oligopeptidase active site domain protein YP_003101197.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: dal:Dalk_3806 peptidase U61 LD- carboxypeptidase A YP_003101200.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hypothetical protein YP_003101201.1 PFAM: aminoglycoside phosphotransferase; KEGG: mrd:Mrad2831_1820 aminoglycoside phosphotransferase YP_003101202.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: pen:PSEEN3343 acyl-CoA dehydrogenase YP_003101203.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: cti:RALTA_B1385 dipeptide ABC transporter atp_binding domain YP_003101204.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6084 ABC transporter, permease YP_003101205.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr6083 ABC transporter, permease YP_003101206.1 PFAM: extracellular solute-binding protein family 5; KEGG: mlo:mlr6082 ABC transporter, binding protein component YP_003101207.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: mrd:Mrad2831_3239 peptidase M55 D- aminopeptidase YP_003101208.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: dal:Dalk_4445 peptidase M20 YP_003101210.1 KEGG: sml:Smlt2568 LacI-family transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003101211.1 KEGG: scl:sce1247 hypothetical protein YP_003101212.1 PFAM: extracellular solute-binding protein family 1; KEGG: bur:Bcep18194_C6933 ABC sugar transporter, periplasmic ligand binding protein YP_003101213.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C6934 ABC sugar transporter, inner membrane subunit YP_003101214.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bur:Bcep18194_C6935 ABC sugar transporter, inner membrane subunit YP_003101215.1 PFAM: integrase family protein; KEGG: gme:Gmet_1427 tyrosine recombinase XerD subunit YP_003101216.1 KEGG: hypothetical protein YP_003101217.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: scl:sce3873 WD repeat-containing protein YP_003101218.1 PFAM: esterase; KEGG: mxa:MXAN_4935 esterase YP_003101219.1 KEGG: bcj:BCAS0321a hypothetical protein YP_003101222.1 KEGG: pzu:PHZ_c2693 cytochrome C-type biogenesis protein CycH YP_003101224.1 KEGG: scl:sce3028 protein kinase YP_003101225.1 KEGG: pau:PA14_07050 hypothetical protein YP_003101226.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: scl:sce5223 DeoR family transcriptional regulator YP_003101227.1 PFAM: aldo/keto reductase; KEGG: rle:RL2983 aldo/keto reductase YP_003101228.1 KEGG: afw:Anae109_3510 hypothetical protein YP_003101229.1 PFAM: regulatory protein TetR; KEGG: gdi:GDI2777 transcription regulator YP_003101230.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bid:Bind_1477 alcohol dehydrogenase YP_003101232.1 PFAM: NUDIX hydrolase; KEGG: bba:Bd2755 ATP/GTP-binding protein YP_003101233.1 PFAM: endoribonuclease L-PSP; KEGG: mch:Mchl_5535 endoribonuclease L-PSP YP_003101234.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: mxa:MXAN_2553 hypothetical protein YP_003101235.1 PFAM: cellulose-binding family II; lipolytic protein G-D-S-L family; SMART: cellulose-binding family II; KEGG: ccs:CCNA_02538 endoglucanase E YP_003101236.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: hha:Hhal_0914 transcriptional regulator, MerR family YP_003101237.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bcj:BCAM0093 MerR family regulatory protein YP_003101238.1 PFAM: erythromycin esterase; KEGG: swi:Swit_1817 erythromycin esterase YP_003101240.1 KEGG: aeh:Mlg_0162 hypothetical protein YP_003101241.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: scl:sce2734 ubiquinone/menaquinone biosynthesis methyltransferase UbiE YP_003101242.1 PFAM: metallophosphoesterase; KEGG: scl:sce2733 bis(5'-nucleosyl)- tetraphosphatase (symmetrical) YP_003101243.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: scl:sce2276 hypothetical protein YP_003101244.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: scl:sce4973 monooxygenase YP_003101245.1 PFAM: conserved hypothetical protein; KEGG: dac:Daci_5761 hypothetical protein YP_003101246.1 PFAM: metallophosphoesterase; KEGG: azc:AZC_0786 ICC protein YP_003101247.1 KEGG: hypothetical protein YP_003101248.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: bcy:Bcer98_0541 extracellular solute-binding protein YP_003101249.1 PFAM: tyrosine protein kinase; SMART: serine/threonine protein kinase; KEGG: scl:sce1432 protein kinase YP_003101250.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: xau:Xaut_0996 protein phosphatase 2C-like protein YP_003101251.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: cti:RALTA_A0035 transcriptional regulator, MarR family YP_003101252.1 KEGG: rpt:Rpal_0425 cytochrome P450 YP_003101253.1 PFAM: aminoglycoside phosphotransferase YP_003101254.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: pla:Plav_0381 alcohol dehydrogenase YP_003101255.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mpt:Mpe_A3662 AraC family transcriptional regulator YP_003101256.1 KEGG: ses:SARI_01345 ATP-dependent RNA helicase HrpA; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; ATPase AAA YP_003101257.1 KEGG: cvi:CV_0390 hypothetical protein YP_003101258.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr4238 hypothetical protein YP_003101259.1 PFAM: phosphoglycerate mutase; KEGG: met:M446_2115 phosphoglycerate mutase YP_003101260.1 KEGG: atc:AGR_C_1833 undecaprenyl-diphosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_003101261.1 PFAM: luciferase-like monooxygenase; KEGG: pzu:PHZ_c2543 5,10- methylenetetrahydromethanopterin reductase YP_003101262.1 PFAM: aldo/keto reductase; KEGG: scl:sce4235 oxidoreductase YP_003101263.1 KEGG: FAP75; flagellar associated protein YP_003101264.1 KEGG: scl:sce2139 hypothetical protein YP_003101266.1 PFAM: protein of unknown function DUF450; KEGG: pmy:Pmen_3692 hypothetical protein YP_003101267.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpd:RPD_1351 GCN5-related N-acetyltransferase YP_003101268.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: scl:sce6697 transcriptional regulator YP_003101269.1 PFAM: ABC transporter; KEGG: scl:sce6315 excinuclease ABC subunit A YP_003101270.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; siderophore-interacting protein; KEGG: mxa:MXAN_3639 iron-chelator utilization protein YP_003101271.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; hypothetical protein; SMART: regulatory protein LuxR; KEGG: SNF2 superfamily protein YP_003101272.1 PFAM: transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: lch:Lcho_2886 IclR family transcriptional regulator YP_003101274.1 PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: hypothetical protein YP_003101275.1 PFAM: Ricin B lectin; lipolytic protein G-D-S-L family; SMART: Ricin B lectin; KEGG: hypothetical protein YP_003101276.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) YP_003101279.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: sil:SPO3307 saccharopine dehydrogenase YP_003101280.1 PFAM: saccharopine dehydrogenase; 6- phosphogluconate dehydrogenase NAD-binding; KEGG: sit:TM1040_0106 saccharopine dehydrogenase (NADP+, L-glutamate forming) YP_003101281.1 KEGG: scl:sce3550 hypothetical protein YP_003101282.1 PFAM: uracil-DNA glycosylase; KEGG: met:M446_1657 uracil-DNA glycosylase protein YP_003101284.1 PFAM: major facilitator superfamily MFS_1; KEGG: atc:AGR_C_1839 hypothetical protein YP_003101286.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mrd:Mrad2831_3652 GCN5-related N- acetyltransferase YP_003101287.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: hypothetical protein YP_003101288.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003101289.1 PFAM: alpha/beta hydrolase fold; KEGG: predicted protein YP_003101290.1 PFAM: glycosyl transferase family 2; KEGG: rru:Rru_A2348 glycosyl transferase YP_003101291.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA2757 benzoate-CoA ligase YP_003101295.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: xau:Xaut_0976 ECF subfamily RNA polymerase sigma-24 factor YP_003101296.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bha:BH3670 attenuator for lytABC and LytR expression YP_003101297.1 PFAM: luciferase-like monooxygenase; KEGG: alkanal monooxygenase (bacterial liciferase alpha chain) like protein YP_003101298.1 PFAM: Bile acid:sodium symporter; KEGG: gox:GOX0688 efflux protein YP_003101299.1 PFAM: aminoglycoside phosphotransferase; KEGG: smt:Smal_1721 aminoglycoside phosphotransferase YP_003101300.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: shn:Shewana3_1740 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003101301.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003101302.1 PFAM: aldo/keto reductase; KEGG: hne:HNE_2225 aldo/keto reductase family oxidoreductase YP_003101303.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bur:Bcep18194_B0145 esterase/lipase/thioesterase YP_003101304.1 PFAM: GCN5-related N-acetyltransferase; KEGG: scl:sce0310 acetyltransferase YP_003101305.1 PFAM: glycoside hydrolase family 43; glycosyl hydrolase family 32 domain protein; KEGG: pzu:PHZ_c2480 xylosidase/arabinosidase YP_003101307.1 PFAM: transcriptional activator domain; hypothetical protein; NB-ARC domain protein; transcriptional regulator domain protein; SMART: hypothetical protein; KEGG: scl:sce6858 hypothetical protein YP_003101308.1 KEGG: hypothetical protein YP_003101309.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: afw:Anae109_0915 two component LuxR family transcriptional regulator YP_003101310.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_0902 two component transcriptional regulator, LuxR family YP_003101311.1 PFAM: major facilitator superfamily MFS_1; KEGG: gbm:Gbem_1224 major facilitator superfamily MFS_1 YP_003101312.1 PFAM: cytochrome P450; KEGG: scl:sce0675 cytochrome P450 CYP267A1 YP_003101313.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3618 non-ribosomal peptide synthetase YP_003101314.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003101315.1 PFAM: MbtH domain protein; KEGG: scl:sce3255 hypothetical protein YP_003101316.1 PFAM: Lantibiotic dehydratase domain protein; KEGG: scl:sce2385 hypothetical protein YP_003101317.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_1089 non-ribosomal peptide synthase YP_003101318.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_3217 pyridoxal-5'-phosphate- dependent enzyme, beta subunit YP_003101319.1 PFAM: Lantibiotic dehydratase domain protein; KEGG: scl:sce2385 hypothetical protein YP_003101320.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: ornithine cyclodeaminase YP_003101323.1 KEGG: mxa:MXAN_2219 hypothetical protein YP_003101324.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: glo:Glov_3660 cobalamin biosynthesis protein CbiM YP_003101325.1 PFAM: cobalt transport protein CbiN; KEGG: kpn:KPN_03187 cobalt transport protein CbiN YP_003101326.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: mag:amb0277 ABC-type cobalt transport system YP_003101327.1 KEGG: mag:amb0278 ABC-type cobalt transport system; TIGRFAM: cobalt ABC transporter ATPase; PFAM: ABC transporter; SMART: ATPase AAA YP_003101328.1 KEGG: bbt:BBta_2404 hypothetical protein YP_003101329.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: azc:AZC_1457 transcriptional regulator YP_003101330.1 KEGG: bha:BH1072 hypothetical protein YP_003101331.1 PFAM: FAD dependent oxidoreductase; KEGG: xca:xccb100_1581 D-amino-acid dehydrogenase YP_003101332.1 PFAM: transcription elongation factor GreA/GreB domain protein YP_003101334.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: scl:sce2341 hypothetical protein YP_003101335.1 PFAM: cytochrome P450; KEGG: scl:sce0675 cytochrome P450 CYP267A1 YP_003101336.1 PFAM: MbtH domain protein; KEGG: bcy:Bcer98_1759 MbtH domain-containing protein YP_003101337.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; methyltransferase type 11; methyltransferase type 12; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: smd:Smed_6472 amino acid adenylation domain YP_003101338.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: neu:NE0720 ABC transporter permease/ATP- binding protein YP_003101339.1 KEGG: nmu:Nmul_A0032 hypothetical protein YP_003101340.1 KEGG: mex:Mext_0734 hypothetical protein YP_003101341.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_2453 serine phosphatase YP_003101343.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ade:Adeh_0027 NAD-dependent epimerase/dehydratase YP_003101344.1 PFAM: regulatory protein TetR; KEGG: mes:Meso_0701 transcriptional regulator, TetR family YP_003101345.1 PFAM: extracellular solute-binding protein family 1; KEGG: thuE; trehalosemaltose ABC transporter YP_003101346.1 PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1416 protein of unknown function DUF214 YP_003101347.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: shl:Shal_1616 lipoprotein releasing system, ATP-binding protein YP_003101348.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_5165 GMC oxidoreductase family protein YP_003101349.1 PFAM: cyclase/dehydrase; KEGG: psp:PSPPH_4312 hypothetical protein YP_003101350.1 PFAM: aminotransferase class-III; KEGG: esa:ESA_03492 putrescine--2-oxoglutarate aminotransferase YP_003101351.1 KEGG: bph:Bphy_6313 isobutylamine N-hydroxylase YP_003101352.1 PFAM: Aldehyde Dehydrogenase; KEGG: pca:Pcar_1701 aldehyde dehydrogenase, NAD- linked YP_003101353.1 KEGG: plu:plu4388 hypothetical protein YP_003101354.1 PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: bph:Bphy_6311 hypothetical protein YP_003101355.1 KEGG: bph:Bphy_6310 integral membrane protein YP_003101356.1 KEGG: kpe:KPK_3424 hypothetical protein YP_003101357.1 PFAM: alpha/beta hydrolase fold; KEGG: hch:HCH_00758 alpha/beta hydrolase YP_003101358.1 PFAM: AMP-dependent synthetase and ligase; KEGG: acp:A2cp1_1619 AMP-dependent synthetase and ligase YP_003101359.1 KEGG: bac:BamMC406_2852 hexapaptide repeat- containing transferase YP_003101360.1 PFAM: regulatory protein LysR; KEGG: mxa:MXAN_5480 transcriptional regulator, LysR family YP_003101361.1 KEGG: nar:Saro_3714 hypothetical protein YP_003101364.1 PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3577 major facilitator transporter YP_003101365.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: mmr:Mmar10_1955 methyltransferase type 11 YP_003101370.1 KEGG: bbr:BB2304 competence protein YP_003101371.1 KEGG: gbm:Gbem_2481 hypothetical protein YP_003101374.1 PFAM: transcription factor WhiB YP_003101376.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein YP_003101377.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003101379.1 SMART: helix-turn-helix domain protein YP_003101380.1 PFAM: protein of unknown function DUF397 YP_003101381.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003101382.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hypothetical protein YP_003101384.1 PFAM: endonuclease/exonuclease/phosphatase; KEGG: rru:Rru_A2021 endonuclease/exonuclease/phosphatase YP_003101385.1 PFAM: aldo/keto reductase; KEGG: ecp:ECP_1719 oxidoreductase YdjG YP_003101386.1 PFAM: Radical SAM domain protein; KEGG: rpb:RPB_2074 radical SAM binding protein YP_003101390.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003101391.1 PFAM: glycosyl transferase group 1; KEGG: sal:Sala_1921 glycosyl transferase, group 1 YP_003101392.1 PFAM: cytochrome P450; KEGG: bxe:Bxe_C0945 cytochrome P450 YP_003101393.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cak:Caul_3937 GCN5-related N- acetyltransferase YP_003101394.1 TIGRFAM: crotonyl-CoA reductase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: dds:Ddes_1332 crotonyl-CoA reductase YP_003101395.1 PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: similar to aspartyl/asparaginyl beta- hydroxylase YP_003101396.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: Os03g0655500; hypothetical protein YP_003101397.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: pca:Pcar_1259 ATP-binding transport protein; multicopy suppressor of HtrB YP_003101398.1 PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: hypothetical protein YP_003101399.1 TIGRFAM: cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: nmu:Nmul_A1792 bifunctional ADP-heptose synthase YP_003101400.1 PFAM: carbamoyltransferase; KEGG: bra:BRADO2235 carbamoyltransferase family protein YP_003101401.1 PFAM: glycosyl transferase family 9; KEGG: rso:RSc0565 ADP-heptose--lipopolysaccharide heptosyltransferase II protein YP_003101402.1 PFAM: MbtH domain protein; KEGG: bbt:BBta_1084 hypothetical protein YP_003101403.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN3233 SyrP protein YP_003101404.1 PFAM: AMP-dependent synthetase and ligase; nitroreductase; phosphopantetheine-binding; KEGG: pen:PSEEN2716 non-ribosomal peptide synthetase YP_003101405.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; Non-ribosomal peptide synthetase; condensation domain protein; KEGG: psb:Psyr_1792 amino acid adenylation YP_003101406.1 KEGG: bbt:BBta_3705 asparagine synthase, glutamine- hydrolyzing; TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003101407.1 PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: hypothetical protein YP_003101408.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: aba:Acid345_0895 NAD-dependent epimerase/dehydratase YP_003101409.1 PFAM: condensation domain protein; phosphopantetheine-binding; KEGG: peptide synthetase YP_003101410.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase YP_003101411.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: eca:ECA1487 non-ribosomal peptide synthetase YP_003101412.1 PFAM: KR domain protein; beta-ketoacyl synthase; acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_3631 polyketide synthase type I YP_003101413.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003101414.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase YP_003101415.1 PFAM: peptidase S45 penicillin amidase; KEGG: mxa:MXAN_2906 penicillin acylase family protein YP_003101416.1 PFAM: condensation domain protein; KEGG: reh:H16_B1685 non-ribosomal peptide synthetase YP_003101417.1 PFAM: helix-turn-helix HxlR type; KEGG: mlo:mlr2600 hypothetical protein YP_003101418.1 KEGG: bmv:BMASAVP1_0867 RemN protein YP_003101420.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003101421.1 PFAM: cytochrome P450; KEGG: hypothetical protein YP_003101422.1 PFAM: protein of unknown function DUF1271; KEGG: bha:BH1605 ferredoxin YP_003101423.1 KEGG: dsh:Dshi_1841 hypothetical protein YP_003101424.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bpa:BPP2159 ABC transporter, ATP-binding protein YP_003101425.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003101426.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; KEGG: scl:sce5432 two-component system sensor kinase YP_003101427.1 PFAM: beta-lactamase; KEGG: bat:BAS2400 penicillin-binding protein YP_003101428.1 PFAM: monooxygenase FAD-binding; KEGG: gdj:Gdia_2837 monooxygenase FAD-binding YP_003101429.1 PFAM: regulatory protein TetR; KEGG: acp:A2cp1_1650 regulatory protein TetR YP_003101430.1 KEGG: nar:Saro_3538 hypothetical protein YP_003101431.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: smd:Smed_0363 protein of unknown function DUF112 transmembrane YP_003101432.1 KEGG: hypothetical protein YP_003101433.1 PFAM: conserved hypothetical protein; KEGG: azc:AZC_4334 hypothetical protein YP_003101434.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sfu:Sfum_3991 signal transduction histidine kinase regulating citrate/malate metabolism YP_003101435.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: vco:VC0395_A1209 response regulator YP_003101436.1 PFAM: YCII-related; KEGG: scl:sce5148 hypothetical protein YP_003101437.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rsq:Rsph17025_2978 alpha amylase, catalytic region YP_003101438.1 PFAM: luciferase-like monooxygenase; KEGG: mex:Mext_1273 dehydrogenase protein YP_003101439.1 SMART: ATPase AAA; KEGG: rme:Rmet_4896 SMC protein-like protein YP_003101440.1 PFAM: regulatory protein TetR; KEGG: tmz:Tmz1t_0804 transcriptional regulator, TetR family YP_003101441.1 PFAM: ketopantoate reductase ApbA/PanE domain protein; KEGG: scl:sce9123 oxidoreductase YP_003101442.1 KEGG: mno:Mnod_4965 hypothetical protein YP_003101443.1 PFAM: regulatory protein TetR; KEGG: baa:BA_3806 bacterial regulatory proteins, TetR family YP_003101444.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: mxa:MXAN_5566 FxsA-like protein YP_003101445.1 PFAM: Radical SAM domain protein; KEGG: mxa:MXAN_4699 L-lysine 2,3- aminomutase YP_003101447.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: rle:pRL120701 transmembrane magnesium and cobalt transport protein YP_003101448.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: lch:Lcho_0755 Crp/FNR family transcriptional regulator YP_003101450.1 KEGG: ade:Adeh_3311 hypothetical protein YP_003101453.1 KEGG: bha:BH2614 cytochrome Caa3 oxidase (subunit I); TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I YP_003101454.1 KEGG: dac:Daci_4530 acyl protein synthase/acyl-CoA reductase-like protein YP_003101455.1 PFAM: acyl-CoA reductase; KEGG: aav:Aave_4516 acyl-CoA reductase YP_003101456.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6315 excinuclease ABC subunit A YP_003101457.1 PFAM: dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: matC; dicarboxylate-carrier protein YP_003101458.1 PFAM: SAF domain protein; homoserine dehydrogenase NAD-binding; KEGG: rru:Rru_A3141 homoserine dehydrogenase, NAD- binding YP_003101459.1 PFAM: type III effector Hrp-dependent outers; KEGG: pde:Pden_3383 type III effector Hrp-dependent outers YP_003101460.1 PFAM: class II aldolase/adducin family protein; KEGG: hiq:CGSHiGG_08670 aldolase YP_003101461.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: psp:PSPPH_4844 DeoR family transcriptional regulator YP_003101462.1 PFAM: Bifunctional DNA primase/polymerase; KEGG: bbt:BBta_1244 phage / plasmid primase P4 YP_003101463.1 PFAM: aminoglycoside phosphotransferase; KEGG: mch:Mchl_5542 aminoglycoside phosphotransferase YP_003101464.1 PFAM: sodium/calcium exchanger membrane region; KEGG: bph:Bphy_3245 sodium/calcium exchanger membrane region YP_003101465.1 KEGG: met:M446_3626 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-3 domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein YP_003101466.1 PFAM: hypothetical protein; hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce3550 hypothetical protein YP_003101467.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1431 anti-anti-sigma factor family protein YP_003101468.1 PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; KEGG: pfo:Pfl01_3138 multi-sensor hybrid histidine kinase YP_003101469.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: afw:Anae109_0803 histidine kinase YP_003101470.1 PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; KEGG: mch:Mchl_3342 anti-sigma regulatory factor, serine/threonine protein kinase YP_003101471.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: xca:xccb100_3165 sigma-B negative effector YP_003101472.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_4410 anti-sigma-factor antagonist YP_003101473.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: xac:XAC1269 positive regulator of sigma-B YP_003101474.1 KEGG: met:M446_0126 hypothetical protein YP_003101475.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: scl:sce0787 hypothetical protein YP_003101476.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_B2514 lipolytic protein YP_003101477.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pag:PLES_32251 transcriptional regulator YP_003101478.1 KEGG: afw:Anae109_3301 hypothetical protein YP_003101479.1 PFAM: glycoside hydrolase family 43; KEGG: hypothetical protein YP_003101480.1 KEGG: mxa:MXAN_5281 hypothetical protein YP_003101483.1 PFAM: ABC transporter transmembrane protein; ABC transporter; SMART: ATPase AAA; KEGG: scl:sce5645 carbohydrate ABC transporter YP_003101485.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: scl:sce5644 carbohydrate ABC transporter YP_003101486.1 PFAM: regulatory protein TetR; KEGG: gdj:Gdia_1592 regulatory protein TetR YP_003101487.1 KEGG: bcz:BCZK2871 hypothetical protein YP_003101489.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: dar:Daro_0364 ABC transporter YP_003101490.1 PFAM: SpoOM family protein; KEGG: vha:VIBHAR_02077 hypothetical protein YP_003101491.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: esa:ESA_01491 hypothetical protein YP_003101492.1 TIGRFAM: DGQHR domain protein; KEGG: spl:Spea_2305 hypothetical protein YP_003101494.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: afw:Anae109_0119 protein kinase YP_003101495.1 TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_0183 alcohol dehydrogenase YP_003101496.1 PFAM: beta-lactamase domain protein; KEGG: glo:Glov_3342 beta-lactamase domain protein YP_003101497.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sus:Acid_3087 TonB-dependent receptor YP_003101498.1 PFAM: major facilitator superfamily MFS_1; KEGG: dol:Dole_0353 major facilitator transporter YP_003101499.1 PFAM: pyridoxal-dependent decarboxylase; aminotransferase class V; KEGG: dal:Dalk_0154 pyridoxal-dependent decarboxylase YP_003101500.1 KEGG: psb:Psyr_1929 hypothetical protein YP_003101501.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpd:BURPS668_A2325 major facilitator superfamily permease YP_003101506.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: xca:xccb100_3974 hypothetical protein YP_003101508.1 KEGG: mgm:Mmc1_3605 MJ0042 family finger-like protein YP_003101512.1 PFAM: FR47 domain protein; GCN5-related N- acetyltransferase; KEGG: swi:Swit_4396 GCN5-related N- acetyltransferase YP_003101515.1 KEGG: bbr:BB0423 hydrolase YP_003101518.1 KEGG: impN; serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial YP_003101519.1 KEGG: hypothetical protein YP_003101520.1 KEGG: rec:RHECIAT_CH0004205 adenylosuccinate synthase protein; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003101521.1 PFAM: NUDIX hydrolase; KEGG: aeh:Mlg_0745 NUDIX hydrolase YP_003101522.1 PFAM: Ricin B lectin; glycoside hydrolase clan GH- D; SMART: Ricin B lectin; KEGG: cak:Caul_2129 alpha-galactosidase YP_003101523.1 KEGG: sde:Sde_1986 hypothetical protein YP_003101524.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003101525.1 PFAM: helix-turn-helix HxlR type; KEGG: bur:Bcep18194_A4724 HxlR family transcriptional regulator YP_003101526.1 PFAM: transketolase; transketolase; KEGG: tgr:Tgr7_0832 1-deoxy-D-xylulose-5-phosphate synthase YP_003101527.1 KEGG: scl:sce8552 terpene cyclase YP_003101528.1 KEGG: hypothetical protein YP_003101529.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cvi:CV_3487 hypothetical protein YP_003101530.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; oxidoreductase FAD-binding domain protein; KEGG: rso:RSc3398 flavohemoprotein (hemoglobin- like) transmembrane YP_003101531.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: aav:Aave_2096 transcriptional regulator, ArsR family YP_003101532.1 PFAM: Roadblock/LC7 family protein; KEGG: sml:Smlt4270 hypothetical protein YP_003101533.1 KEGG: sml:Smlt4269 hypothetical protein YP_003101534.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_0895 phytoene desaturase YP_003101535.1 PFAM: polyprenyl synthetase; KEGG: scl:sce4204 geranyltranstransferase YP_003101536.1 PFAM: squalene/phytoene synthase; KEGG: PSY; PSY (PHYTOENE SYNTHASE); geranylgeranyl- diphosphate geranylgeranyltransferase; K02291 phytoene synthase YP_003101537.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bur:Bcep18194_B0420 Rieske (2Fe-2S) protein YP_003101538.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: hypothetical protein YP_003101539.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: mno:Mnod_7055 ubiquinone/menaquinone biosynthesis methyltransferase YP_003101540.1 TIGRFAM: lycopene cyclase domain protein YP_003101541.1 TIGRFAM: lycopene cyclase domain protein; KEGG: mxa:MXAN_0901 hypothetical protein YP_003101542.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: sme:SMc01715 hypothetical protein YP_003101543.1 PFAM: monooxygenase FAD-binding; KEGG: gdj:Gdia_2837 monooxygenase FAD-binding YP_003101544.1 PFAM: aldo/keto reductase; KEGG: bur:Bcep18194_B1321 aldo/keto reductase YP_003101545.1 KEGG: hypothetical protein YP_003101546.1 KEGG: calcium-binding protein YP_003101547.1 PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein YP_003101548.1 PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein YP_003101550.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B0126 5-carboxymethyl-2- hydroxymuconate isomerase YP_003101551.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: ajs:Ajs_3259 alkylhydroperoxidase YP_003101552.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hch:HCH_02847 peptide arylation protein YP_003101553.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: nmu:Nmul_A0969 L-carnitine dehydratase/bile acid-inducible protein F YP_003101554.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: scl:sce8893 hypothetical protein YP_003101555.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_1766 cyclohexanecarboxylate-CoA ligase YP_003101556.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cvi:CV_1653 protoporphyrinogen oxidase YP_003101557.1 PFAM: UbiA prenyltransferase; KEGG: hha:Hhal_1173 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003101558.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: gur:Gura_3006 methyltransferase type 11 YP_003101559.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: DegT/DnrJ/EryC1/StrS aminotransferase YP_003101560.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: scl:sce7344 NDP-sugar aminotransferase YP_003101561.1 PFAM: oxidoreductase domain protein; KEGG: xac:XAC0681 oxidoreductase YP_003101562.1 PFAM: xylose isomerase; KEGG: sus:Acid_2233 xylose isomerase domain- containing protein YP_003101563.1 PFAM: peptidase M20; KEGG: sus:Acid_2224 acetylornithine deacetylase YP_003101564.1 PFAM: malate/L-lactate dehydrogenase; KEGG: bpt:Bpet2680 malate dehydrogenase YP_003101565.1 PFAM: oxidoreductase domain protein; KEGG: met:M446_2288 oxidoreductase domain- containing protein YP_003101567.1 PFAM: calcium-binding EF-hand-containing protein; SMART: calcium-binding EF-hand-containing protein; KEGG: bbt:BBta_5331 calcium-binding domain- containing protein YP_003101568.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sus:Acid_4597 UDP-glucose 6-dehydrogenase YP_003101570.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr3236 oxidoreductase YP_003101571.1 PFAM: regulatory protein TetR; KEGG: scl:sce6308 TetR family transcriptional regulator YP_003101572.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dsh:Dshi_2951 pyridoxal-5'-phosphate- dependent protein beta subunit YP_003101573.1 KEGG: mrd:Mrad2831_3526 PRC-barrel domain- containing protein YP_003101574.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; KEGG: cps:CPS_2650 alpha-1,2-mannosidase family protein YP_003101576.1 PFAM: alpha/beta hydrolase fold; KEGG: rle:RL1000 hydrolase YP_003101577.1 KEGG: rle:RL0999 two-component regulator sensor histidine kinase protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_003101578.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist YP_003101579.1 KEGG: psb:Psyr_0893 hypothetical protein YP_003101580.1 KEGG: nha:Nham_0965 ChrB domain-containing protein YP_003101581.1 PFAM: major facilitator superfamily MFS_1; KEGG: afw:Anae109_0137 major facilitator transporter YP_003101582.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: hne:HNE_1728 signal peptidase II YP_003101583.1 KEGG: rle:RL3033 hypothetical protein YP_003101584.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: afw:Anae109_1735 SARP family transcriptional regulator YP_003101586.1 PFAM: Lantibiotic dehydratase domain protein; KEGG: scl:sce9070 hypothetical protein YP_003101588.1 KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase YP_003101589.1 PFAM: protein of unknown function DUF181; KEGG: bca:BCE_1377 hypothetical protein YP_003101591.1 KEGG: rsh:Rsph17029_3715 nitroreductase YP_003101592.1 KEGG: rme:Rmet_5057 transcriptional regulator, TetR family YP_003101593.1 KEGG: swi:Swit_4207 esterase YP_003101594.1 KEGG: nar:Saro_1805 hypothetical protein YP_003101596.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF YP_003101597.1 KEGG: met:M446_2237 hypothetical protein YP_003101598.1 PFAM: integrase family protein; KEGG: afw:Anae109_4219 phage integrase family protein YP_003101599.1 KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase YP_003101602.1 PFAM: protein of unknown function DUF312; KEGG: hso:HS_1058 large adhesin YP_003101604.1 PFAM: protein of unknown function DUF312; KEGG: hso:HS_1058 large adhesin YP_003101605.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hypothetical protein YP_003101606.1 PFAM: condensation domain protein; KEGG: bam:Bamb_1537 amino acid adenylation domain- containing protein YP_003101607.1 KEGG: cak:Caul_1058 hypothetical protein YP_003101608.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ank:AnaeK_2445 short-chain dehydrogenase/reductase SDR YP_003101609.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003101610.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: hypothetical protein YP_003101611.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: pen:PSEEN2717 non-ribosomal peptide synthetase YP_003101612.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; condensation domain protein; KR domain protein; Thioesterase; phosphopantetheine-binding; KEGG: pen:PSEEN2718 polyketide synthase (terminal component) YP_003101613.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: pen:PSEEN2720 dioxygenase, TauD YP_003101614.1 PFAM: cytochrome P450; KEGG: scl:sce7167 hypothetical protein YP_003101615.1 KEGG: mes:Meso_2739 UDP-glucose pyrophosphorylase YP_003101616.1 PFAM: beta-lactamase; KEGG: xac:XAC0134 beta-lactamase YP_003101617.1 PFAM: glycosyl transferase family 28; KEGG: scl:sce8970 glycosyl transferase YP_003101619.1 PFAM: NmrA family protein; KEGG: scl:sce1557 hypothetical protein YP_003101620.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bma:BMAA0201 transcriptional regulator CatR YP_003101622.1 PFAM: cupin; KEGG: hypothetical protein YP_003101623.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rme:Rmet_4293 alcohol dehydrogenase, zinc- binding YP_003101624.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcj:BCAM0680 DNA-binding protein YP_003101626.1 KEGG: hypothetical protein YP_003101627.1 PFAM: glycoside hydrolase family 18; KEGG: hypothetical protein YP_003101628.1 PFAM: transport system permease protein; KEGG: pmy:Pmen_4564 transport system permease protein YP_003101629.1 PFAM: periplasmic binding protein; KEGG: pen:PSEEN3067 Fe uptake ABC transporter, periplasmic binding protein YP_003101630.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: pau:PA14_39660 hypothetical protein YP_003101631.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pmy:Pmen_4566 ABC transporter YP_003101632.1 PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein YP_003101633.1 PFAM: periplasmic binding protein; KEGG: bpm:BURPS1710b_3208 periplasmic binding protein YP_003101634.1 PFAM: major facilitator superfamily MFS_1; KEGG: dsh:Dshi_2354 major facilitator transporter YP_003101635.1 KEGG: bha:BH2073 hypothetical protein YP_003101636.1 KEGG: bha:BH2072 hypothetical protein YP_003101637.1 KEGG: bha:BH2071 hypothetical protein YP_003101639.1 KEGG: rso:RS03054 hypothetical protein YP_003101640.1 KEGG: bpy:Bphyt_0257 hypothetical protein YP_003101641.1 PFAM: carbamoyltransferase; KEGG: bpy:Bphyt_0258 carbamoyltransferase YP_003101642.1 PFAM: glycoside hydrolase family 43; KEGG: cja:CJA_0819 alpha-L-arabinfuranosidase, , abf43M YP_003101643.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: sde:Sde_3710 arabinogalactan endo-1,4-beta- galactosidase YP_003101644.1 PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mfa:Mfla_0439 aminomethyltransferase YP_003101645.1 PFAM: FAD dependent oxidoreductase; KEGG: sus:Acid_5898 N-methyltryptophan oxidase YP_003101646.1 PFAM: aldo/keto reductase; KEGG: gur:Gura_3526 aldo/keto reductase YP_003101648.1 PFAM: carbamoyltransferase; KEGG: nha:Nham_2127 carbamoyltransferase YP_003101649.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: tbd:Tbd_2162 hypothetical protein YP_003101650.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppu:PP_3961 major facilitator transporter YP_003101652.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: cvi:CV_3295 hypothetical protein YP_003101653.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: afw:Anae109_0511 activator of HSP90 ATPase 1 family protein YP_003101654.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: afw:Anae109_0512 regulatory protein ArsR YP_003101655.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ent:Ent638_3529 XRE family transcriptional regulator YP_003101656.1 PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_5551 hypothetical protein YP_003101657.1 KEGG: sde:Sde_0791 alpha-L-arabinofuranosidase; PFAM: glycoside hydrolase family 43; Ricin B lectin; SMART: Ricin B lectin YP_003101658.1 PFAM: aldo/keto reductase; KEGG: mes:Meso_3900 aldo/keto reductase YP_003101659.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sus:Acid_5261 anti-sigma-factor antagonist YP_003101660.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: acp:A2cp1_0906 transcriptional regulator, LuxR family YP_003101661.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_3357 EmrB/QacA family drug resistance transporter YP_003101662.1 PFAM: regulatory protein TetR; KEGG: transcriptional regulator protein YP_003101663.1 KEGG: acp:A2cp1_0909 translation initiation factor SUI1 YP_003101665.1 KEGG: YALI0E33891p YP_003101666.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: azc:AZC_4213 anti-sigma factor antagonist YP_003101667.1 KEGG: cti:RALTA_B0128 multi-site sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003101668.1 PFAM: ATP-binding region ATPase domain protein YP_003101669.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003101670.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; cyclic nucleotide- binding; KEGG: swi:Swit_2706 Crp/FNR family transcriptional regulator YP_003101671.1 PFAM: pectate lyase/Amb allergen; SMART: pectate lyase/Amb allergen; KEGG: sde:Sde_0943 ribosomal protein S5 YP_003101672.1 KEGG: acetyl xylan esterase; K01567; TIGRFAM: esterase, PHB depolymerase family; PFAM: cellulose-binding family II; SMART: cellulose-binding family II YP_003101673.1 KEGG: vvu:VV2_0700 beta-lactamase class A YP_003101674.1 PFAM: regulatory protein LysR; KEGG: bmj:BMULJ_04428 LysR family transcriptional regulator YP_003101675.1 PFAM: beta-lactamase; penicillin-binding protein transpeptidase; KEGG: bsu:BSU18800 beta-lactamase precursor YP_003101676.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sml:Smlt2229 hypothetical protein YP_003101677.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: sme:SMc00680 zinc-type alcohol dehydrogenase protein YP_003101679.1 KEGG: dac:Daci_4779 SPW repeat-containing protein YP_003101680.1 KEGG: scl:sce6003 protein kinase YP_003101682.1 PFAM: pyrrolo-quinoline quinone; SMART: pyrrolo-quinoline quinone; KEGG: rso:RSc1218 lipoprotein transmembrane YP_003101683.1 PFAM: monooxygenase FAD-binding; KEGG: pde:Pden_1503 hypothetical protein YP_003101684.1 PFAM: extracellular solute-binding protein family 5; KEGG: ABC-type dipeptide transport system, periplasmic component; K02035 peptide/nickel transport system substrate-binding protein YP_003101685.1 Represses a number of genes involved in the response to DNA damage YP_003101686.1 PFAM: regulatory protein TetR; KEGG: bja:bll7174 transcriptional regulatory protein YP_003101687.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpy:Bphyt_1098 short-chain dehydrogenase/reductase SDR YP_003101688.1 KEGG: hypothetical protein YP_003101689.1 PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_2233 major facilitator family transporter YP_003101690.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_1768 TetR family transcriptional regulator YP_003101691.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate YP_003101692.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: oan:Oant_4026 transcriptional regulator, MarR family YP_003101693.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; KEGG: xca:xccb100_3664 riboflavin biosynthesis protein RibD (diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-[5-phosphoribosylamino]uracil reductase) YP_003101694.1 PFAM: peptidase dimerization domain protein; peptidase M20; KEGG: aba:Acid345_0237 peptidase M20 YP_003101695.1 PFAM: PBS lyase HEAT domain protein repeat- containing protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat- containing protein; KEGG: afw:Anae109_2123 heat repeat-containing PBS lyase YP_003101696.1 KEGG: hypothetical protein LOC100014234 YP_003101697.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xcv:XCV1204 oxidoreductase YP_003101698.1 PFAM: glycoside hydrolase family 12; KEGG: hypothetical protein YP_003101699.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psb:Psyr_0904 short-chain dehydrogenase/reductase SDR YP_003101700.1 KEGG: tgr:Tgr7_0702 glutathione S- transferase YP_003101701.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: atc:AGR_pAT_269 hypothetical protein YP_003101702.1 PFAM: NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: bpa:BPP3249 hypothetical protein YP_003101703.1 PFAM: hypothetical protein; KEGG: mlo:mll8365 hypothetical protein YP_003101704.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bph:Bphy_7397 TAP domain-containing protein YP_003101705.1 KEGG: rpb:RPB_1369 hypothetical protein YP_003101706.1 KEGG: ank:AnaeK_1205 protein of unknown function DUF1028 YP_003101707.1 PFAM: SEFIR domain protein; KEGG: gme:Gmet_1793 hypothetical protein YP_003101709.1 KEGG: nwi:Nwi_1916 hypothetical protein YP_003101710.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003101711.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003101713.1 PFAM: Thioesterase; KEGG: pau:PA14_09230 pyochelin biosynthetic protein PchC YP_003101714.1 KEGG: hypothetical protein YP_003101715.1 PFAM: monooxygenase FAD-binding; KEGG: msl:Msil_0387 monooxygenase FAD-binding YP_003101716.1 PFAM: regulatory protein TetR; KEGG: acp:A2cp1_2482 transcriptional regulator, TetR family YP_003101717.1 PFAM: xylose isomerase; KEGG: smd:Smed_3334 xylose isomerase domain protein TIM barrel YP_003101718.1 KEGG: sme:SMc04132 hypothetical protein YP_003101719.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: atc:AGR_L_3386 hypothetical protein YP_003101720.1 PFAM: superoxide dismutase copper/zinc binding YP_003101721.1 KEGG: rlt:Rleg2_2895 heat domain containing protein YP_003101722.1 PFAM: alpha/beta hydrolase fold; KEGG: pde:Pden_1042 alpha/beta hydrolase fold YP_003101723.1 PFAM: transcriptional regulator domain protein; KEGG: bcb:BCB4264_A1351 DNA-binding response regulator YP_003101724.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: sde:Sde_1920 methenyltetrahydrofolate cyclohydrolase YP_003101725.1 KEGG: sus:Acid_5487 O-acetylhomoserine/O- acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003101726.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bbt:BBta_7223 short-chain dehydrogenase/reductase SDR YP_003101727.1 KEGG: jan:Jann_0393 NAD-dependent epimerase/dehydratase YP_003101728.1 PFAM: acyl transferase; beta-ketoacyl synthase; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; phosphopantetheine-binding; KEGG: pst:PSPTO_4686 coronafacic acid polyketide synthase I YP_003101729.1 PFAM: luciferase-like monooxygenase; KEGG: oca:OCAR_4999 hypothetical protein YP_003101730.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dde:Dde_2559 beta-N-acetylhexosaminidase YP_003101731.1 KEGG: acp:A2cp1_0462 exonuclease SbcC YP_003101737.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sus:Acid_7020 WD-40 repeat-containing serine/threonin protein kinase YP_003101738.1 KEGG: rle:pRL90161 hypothetical protein YP_003101739.1 KEGG: bba:Bd3647 hypothetical protein YP_003101740.1 KEGG: hypothetical protein; PFAM: Ricin B lectin; SMART: Ricin B lectin YP_003101741.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_4674 acyl-CoA synthetase YP_003101742.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: RCJMB04_10a6, FOXRED2; FAD-dependent oxidoreductase domain containing 2 YP_003101743.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: scl:sce7671 (S)-2-hydroxy-acid oxidase YP_003101744.1 KEGG: predicted protein YP_003101745.1 PFAM: sodium/hydrogen exchanger; KEGG: pzu:PHZ_c2901 Kef-type K+ transport system, membrane component YP_003101746.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: histidine kinase YP_003101747.1 KEGG: similar to mucin 2; K10955 intestinal mucin- 2 YP_003101748.1 KEGG: asa:ASA_3456 hypothetical protein YP_003101749.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003101750.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: reu:Reut_B4643 mandelate racemase/muconate lactonizing protein YP_003101751.1 PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; KEGG: hch:HCH_05909 hypothetical protein YP_003101752.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: rru:Rru_A2339 ABC transporter component YP_003101753.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: rru:Rru_A2340 ABC transporter, transmembrane region YP_003101754.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr7883 transcription regulator YP_003101755.1 PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_1773 hypothetical protein YP_003101756.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit YP_003101758.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003101759.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: mmr:Mmar10_2544 signal transduction histidine kinase YP_003101760.1 KEGG: afw:Anae109_4407 hypothetical protein YP_003101761.1 PFAM: Helix-turn-helix type 11 domain protein; protein of unknown function UPF0074; KEGG: afw:Anae109_3752 helix-turn-helix type 11 domain-containing protein YP_003101762.1 KEGG: CG32198 YP_003101763.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: bph:Bphy_6164 TetR family transcriptional regulator YP_003101764.1 PFAM: protein of unknown function DUF1486; KEGG: cak:Caul_1308 hypothetical protein YP_003101765.1 PFAM: beta-lactamase domain protein; KEGG: bja:blr3078 hypothetical protein YP_003101768.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcn:Bcen_3699 GCN5-related N- acetyltransferase YP_003101769.1 PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator YP_003101770.1 KEGG: lch:Lcho_2475 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_003101771.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sus:Acid_5032 two component transcriptional regulator YP_003101772.1 PFAM: peptidoglycan-binding domain 1 protein; KEGG: gur:Gura_3473 peptidoglycan binding domain- containing protein YP_003101773.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: vco:VC0395_A1173 ABC transporter, ATP-binding protein YP_003101774.1 PFAM: protein of unknown function DUF214; KEGG: gur:Gura_3474 ABC transporter YP_003101777.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: spe:Spro_3869 cysteine desulfurase family protein YP_003101778.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: scl:sce3486 choline dehydrogenase YP_003101779.1 PFAM: O-methyltransferase; methyltransferase type 12; methyltransferase type 11; KEGG: sfu:Sfum_0920 O-methyltransferase, family 2 YP_003101780.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: mxa:MXAN_3277 peroxidase, selenocysteine-containing YP_003101781.1 KEGG: cbg:CbuG_0320 hypothetical membrane spanning protein YP_003101782.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KR domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; KEGG: ade:Adeh_0777 NAD-dependent epimerase/dehydratase YP_003101783.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pde:Pden_2689 flavin reductase domain protein, FMN-binding YP_003101784.1 KEGG: pau:PA14_51770 hypothetical protein YP_003101785.1 PFAM: beta-ketoacyl synthase; acyl transferase; KR domain protein; short-chain dehydrogenase/reductase SDR; KEGG: mca:MCA1238 polyketide synthase YP_003101786.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like YP_003101787.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like YP_003101788.1 PFAM: major facilitator superfamily MFS_1; KEGG: aha:AHA_1643 major facilitator transporter YP_003101789.1 PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02225 hypothetical protein YP_003101790.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr8188 dehalogenase YP_003101791.1 KEGG: mxa:MXAN_0277 hypothetical protein YP_003101792.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1049 glycosyl transferase family 2 YP_003101793.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: bur:Bcep18194_B1567 acyl-CoA dehydrogenase- like YP_003101794.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bja:bll7368 hydrolase YP_003101795.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pmy:Pmen_1335 protein of unknown function DUF899, thioredoxin family protein YP_003101796.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bha:BH0710 hypothetical protein YP_003101797.1 KEGG: bpt:Bpet4347 hypothetical protein YP_003101799.1 PFAM: ABC-1 domain protein; KEGG: rsh:Rsph17029_0006 2-polyprenylphenol 6- hydroxylase YP_003101800.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: gur:Gura_3352 uncharacterized peroxidase- related enzyme YP_003101801.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: msl:Msil_2581 short-chain dehydrogenase/reductase SDR YP_003101802.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: scl:sce3486 choline dehydrogenase YP_003101803.1 PFAM: protein of unknown function DUF1702 YP_003101804.1 PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein YP_003101805.1 KEGG: acp:A2cp1_3940 hypothetical protein YP_003101806.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0851 AraC/XylS family transcriptional regulator YP_003101807.1 PFAM: regulatory protein TetR; KEGG: rfr:Rfer_0325 TetR family transcriptional regulator YP_003101808.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: swi:Swit_1657 alcohol dehydrogenase YP_003101809.1 PFAM: regulatory protein TetR; KEGG: cak:Caul_4437 TetR family transcriptional regulator YP_003101810.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pde:Pden_2689 flavin reductase domain protein, FMN-binding YP_003101811.1 PFAM: acyl transferase; KEGG: dsh:Dshi_1963 beta-ketoacyl synthase YP_003101812.1 KEGG: mxa:MXAN_7127 FG-GAP repeat protein YP_003101813.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein YP_003101814.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpi:Rpic_1138 short-chain dehydrogenase/reductase SDR YP_003101815.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: pmy:Pmen_1335 protein of unknown function DUF899, thioredoxin family protein YP_003101816.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0253 AMP-dependent synthetase and ligase YP_003101817.1 catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA YP_003101818.1 PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; KEGG: mxa:MXAN_7127 FG-GAP repeat protein YP_003101819.1 KEGG: mxa:MXAN_7127 FG-GAP repeat protein YP_003101820.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bha:BH0851 AraC/XylS family transcriptional regulator YP_003101822.1 KEGG: GK18511 gene product from transcript GK18511- RA YP_003101823.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: azc:AZC_2089 hypothetical protein YP_003101824.1 PFAM: PEP-utilizing protein; KEGG: ccs:CCNA_00571 phosphoenolpyruvate-protein phosphotransferase/phosphocarrier protein HPr/PTS system, glucose-specific IIA subunit YP_003101825.1 KEGG: ade:Adeh_3102 molybdopterin-binding xanthine dehydrogenase YP_003101826.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mxa:MXAN_1751 isoquinoline 1-oxidoreductase, alpha subunit YP_003101828.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: scl:sce2990 hypothetical protein YP_003101829.1 PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase; KEGG: xau:Xaut_2988 helicase domain-containing protein YP_003101830.1 KEGG: hypothetical protein YP_003101831.1 KEGG: scl:sce0662 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003101832.1 KEGG: scl:sce0661 mannan endo-1,4-beta-mannosidase YP_003101833.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: ccs:CCNA_02903 starvation sensing protein RspA YP_003101835.1 PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: scl:sce2212 topoisomerase YP_003101836.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: met:M446_1000 hypothetical protein YP_003101837.1 PFAM: calcium/calmodulin dependent protein kinase II association-domain protein; KEGG: pfl:PFL_3821 hypothetical protein YP_003101838.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ppu:PP_4505 integral membrane sensor signal transduction histidine kinase YP_003101839.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bte:BTH_II1765 DNA-binding response regulator YP_003101840.1 KEGG: fibrocystin-L-like protein YP_003101842.1 PFAM: aminoglycoside phosphotransferase; KEGG: bps:BPSL0571 hypothetical protein YP_003101843.1 KEGG: dac:Daci_2301 hypothetical protein YP_003101844.1 SMART: von Willebrand factor type A; KEGG: dac:Daci_2300 hypothetical protein YP_003101845.1 PFAM: pirin; KEGG: pap:PSPA7_4173 hypothetical protein YP_003101846.1 KEGG: mxa:MXAN_0224 hypothetical protein YP_003101849.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: sml:Smlt0507 arylesterase (aryl- ester hydrolase) YP_003101850.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: dsh:Dshi_3592 Cna B domain-containing protein YP_003101851.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: hypothetical protein YP_003101852.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: hdu:HD0746 endo-1,4-beta-xylanase A YP_003101853.1 PFAM: cellulose-binding family II; glycoside hydrolase family 5; SMART: cellulose-binding family II; KEGG: sde:Sde_0064 secreted beta- mannosidase YP_003101854.1 KEGG: mno:Mnod_3288 hypothetical protein YP_003101855.1 KEGG: pap:PSPA7_4431 hypothetical protein YP_003101856.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bvi:Bcep1808_2033 allergen V5/TPX-1 family protein YP_003101857.1 KEGG: hypothetical LOC100006405 YP_003101858.1 KEGG: hypothetical protein YP_003101859.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_003101860.1 KEGG: rme:Rmet_4144 citrate synthase YP_003101861.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rme:Rmet_4145 L-carnitine dehydratase/bile acid-inducible protein F YP_003101862.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: bpt:Bpet0754 hypothetical protein YP_003101863.1 KEGG: bja:blr3162 hypothetical protein YP_003101864.1 PFAM: conserved hypothetical protein; KEGG: oan:Oant_3917 uncharacterized protein UPF0065 YP_003101865.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_B1947 transcriptional regulator, IclR family YP_003101866.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: mrd:Mrad2831_3497 dimethylmenaquinone methyltransferase YP_003101867.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ppf:Pput_1368 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003101868.1 KEGG: hypothetical protein YP_003101869.1 PFAM: protein of unknown function DUF1177; KEGG: vei:Veis_1102 protein of unknown function DUF1177 YP_003101870.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: jan:Jann_1486 Asp/Glu racemase YP_003101871.1 PFAM: AroM family protein; KEGG: spe:Spro_1025 hypothetical protein YP_003101872.1 PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: vei:Veis_1103 oligopeptide transporter OPT superfamily protein YP_003101873.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reu:Reut_B5545 regulatory protein, IclR YP_003101874.1 alpha-aspartyl dipeptidase; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family YP_003101875.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; cellulose-binding family II; SMART: serine/threonine protein kinase; cellulose- binding family II; tyrosine protein kinase; KEGG: acp:A2cp1_2229 serine/threonine protein kinase with TPR repeats YP_003101878.1 PFAM: pectate lyase; Ricin B lectin; SMART: Ricin B lectin; KEGG: hypothetical protein YP_003101879.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: msl:Msil_0872 alcohol dehydrogenase GroES domain protein YP_003101880.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: abo:ABO_0014 MarR family transcriptional regulator YP_003101881.1 PFAM: FAD dependent oxidoreductase; KEGG: similar to D-aspartate oxidase; K00272 D- aspartate oxidase YP_003101882.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: afw:Anae109_1933 methionine aminopeptidase, type I YP_003101883.1 SMART: ATPase AAA; hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003101884.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: bcu:BCAH820_0093 DNA-binding protein YP_003101885.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003101886.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: abo:ABO_1940 apolipoprotein N-acyltransferase YP_003101887.1 KEGG: met:M446_3732 von Willebrand factor type A YP_003101888.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: oxidoreductase protein YP_003101889.1 SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003101890.1 PFAM: alpha/beta hydrolase fold; KEGG: alpha/beta hydrolase protein YP_003101891.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: scl:sce8843 MarR family transcriptional regulator YP_003101892.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003101893.1 PFAM: ferric-uptake regulator; KEGG: hhe:HH0942 transcriptional regulator YP_003101894.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: pol:Bpro_0678 catalase/peroxidase HPI YP_003101895.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: she:Shewmr4_1596 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003101896.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: she:Shewmr4_1596 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003101897.1 TIGRFAM: hypothetical protein; PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein YP_003101899.1 KEGG: xca:xccb100_0130 exported pectinesterase; PFAM: pectinesterase; Ricin B lectin; SMART: Ricin B lectin YP_003101900.1 PFAM: Ricin B lectin; pectate lyase/Amb allergen; SMART: Ricin B lectin; Parallel beta-helix repeat; pectate lyase/Amb allergen; KEGG: bha:BH0698 pectate lyase YP_003101902.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_003101903.1 PFAM: regulatory protein TetR; KEGG: sus:Acid_4679 TetR family transcriptional regulator YP_003101904.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bsu:BSU10500 hypothetical protein YP_003101905.1 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde YP_003101906.1 KEGG: bmj:BMULJ_04091 APA family basic amino acid/polyamine antiporter YP_003101907.1 KEGG: rso:RSp1425 L-ornithine 5-monooxygenase oxidoreductase protein YP_003101908.1 PFAM: FAD dependent oxidoreductase; KEGG: bpy:Bphyt_0284 FAD dependent oxidoreductase YP_003101909.1 PFAM: tRNA synthetase class I (M); cupin; KEGG: pen:PSEEN0982 methionine--tRNA ligase YP_003101910.1 KEGG: hypothetical protein YP_003101911.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: tmz:Tmz1t_1271 hypothetical protein YP_003101912.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RS03119 transmembrane protein YP_003101913.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: rso:RS03114 hypothetical protein YP_003101914.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS03108 hypothetical protein YP_003101915.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RS03113 esterase protein YP_003101916.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS03108 hypothetical protein YP_003101917.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS03106 acetyltransferase protein YP_003101918.1 KEGG: rso:RS03105 hypothetical protein YP_003101919.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: aha:AHA_4117 regulatory protein, LysR:LysR, substrate-binding YP_003101920.1 PFAM: inositol monophosphatase; KEGG: rru:Rru_A1076 inositol monophosphatase YP_003101921.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: dsh:Dshi_0026 NAD-dependent epimerase/dehydratase YP_003101922.1 KEGG: hypothetical protein YP_003101924.1 KEGG: GK21128 gene product from transcript GK21128- RA YP_003101926.1 PFAM: glycoside hydrolase family 5; KEGG: hypothetical protein YP_003101927.1 KEGG: hypothetical protein YP_003101928.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bcz:pE33L466_0439 transcriptional regulator YP_003101929.1 PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: net:Neut_0352 sulphate transporter YP_003101930.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: atc:AGR_pAT_269 hypothetical protein YP_003101932.1 PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_5854 hypothetical protein YP_003101934.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003101935.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase; KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 YP_003101936.1 PFAM: cytochrome P450; KEGG: bca:BCE_2696 cytochrome P450 YP_003101937.1 KEGG: sus:Acid_0740 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein YP_003101938.1 PFAM: glycoside hydrolase family 11; KEGG: sde:Sde_3061 xylanase/chitin deacetylase-like YP_003101939.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carboxyl transferase; biotin/lipoyl attachment domain- containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: aba:Acid345_0466 carbamoyl-phosphate synthase L chain, ATP-binding YP_003101940.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_2483 binding-protein-dependent transport systems inner membrane component YP_003101941.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xfm:Xfasm12_1606 ABC transporter sugar permease YP_003101942.1 PFAM: extracellular solute-binding protein family 1; KEGG: sit:TM1040_3216 extracellular solute-binding protein YP_003101944.1 PFAM: aldo/keto reductase; KEGG: cak:Caul_4616 aldo/keto reductase YP_003101945.1 SMART: helix-turn-helix domain protein; KEGG: rle:RL4049 hypothetical protein YP_003101946.1 KEGG: sml:Smlt3526 outer membrane lipoprotein YP_003101947.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0303 transcriptional regulator, LysR family YP_003101948.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: rpb:RPB_0526 short chain dehydrogenase YP_003101951.1 KEGG: bvi:Bcep1808_7108 ATPase YP_003101952.1 KEGG: mxa:MXAN_1171 oxidoreductase, short chain dehydrogenase/reductase family YP_003101953.1 KEGG: sme:SMa0312 hypothetical protein YP_003101954.1 KEGG: scl:sce1386 galactoside O-acetyltransferase YP_003101956.1 KEGG: excinuclease ABC C subunit domain protein YP_003101957.1 KEGG: rce:RC1_0609 D-alanine--D-alanine ligase B YP_003101958.1 KEGG: predicted protein YP_003101959.1 PFAM: O-methyltransferase; KEGG: zgc:113054 YP_003101960.1 PFAM: 3-dehydroquinate synthase; KEGG: hypothetical protein; K01735 3- dehydroquinate synthase YP_003101961.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003101962.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003101963.1 PFAM: beta-lactamase; KEGG: swi:Swit_4612 beta-lactamase YP_003101966.1 KEGG: bur:Bcep18194_B1559 hypothetical protein YP_003101967.1 KEGG: bur:Bcep18194_B1559 hypothetical protein YP_003101969.1 PFAM: endoribonuclease L-PSP; KEGG: scl:sce5646 hypothetical protein YP_003101970.1 PFAM: protein of unknown function DUF124; KEGG: protein of unknown function DUF124 YP_003101972.1 PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_1445 alpha/beta hydrolase fold YP_003101973.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rpb:RPB_1659 MarR family transcriptional regulator YP_003101974.1 KEGG: aba:Acid345_2268 hypothetical protein YP_003101975.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: afw:Anae109_3347 transcriptional activator domain-containing protein YP_003101977.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: pfl:PFL_0942 Oye family NADH-dependent flavin oxidoreductase YP_003101978.1 PFAM: regulatory protein TetR; KEGG: bbt:BBta_0873 TetR family transcriptional regulator YP_003101979.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce5395 aminoglycoside phosphotransferase YP_003101980.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: scl:sce5396 hypothetical protein YP_003101981.1 KEGG: spe:Spro_1475 hydrolase family protein YP_003101982.1 KEGG: bha:BH0194 repressor in the phenylacetic acid catabolic pathway YP_003101983.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bsu:BSU19120 hypothetical protein YP_003101984.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: afe:Lferr_0209 heavy metal translocating P- type ATPase YP_003101985.1 PFAM: major facilitator superfamily MFS_1; KEGG: smd:Smed_5611 major facilitator superfamily MFS_1 YP_003101986.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dvm:DvMF_1207 transcriptional regulator, ArsR family YP_003101987.1 PFAM: iron permease FTR1; KEGG: pde:Pden_1733 iron permease FTR1 YP_003101988.1 KEGG: nmn:NMCC_0036 hypothetical protein YP_003101989.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: bur:Bcep18194_A3951 Dyp-type peroxidase YP_003101990.1 PFAM: Penicillinase repressor; KEGG: mxa:MXAN_7319 transcriptional regulator YP_003101991.1 PFAM: protein of unknown function DUF1470; KEGG: bbr:BB0827 hypothetical protein YP_003101992.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: bpy:Bphyt_5343 epoxide hydrolase domain protein YP_003101993.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: pde:Pden_3525 ABC transporter YP_003101994.1 PFAM: transport system permease protein; KEGG: oan:Oant_2825 transport system permease protein YP_003101995.1 PFAM: transport system permease protein; KEGG: oan:Oant_2826 transport system permease protein YP_003101996.1 PFAM: periplasmic binding protein; KEGG: pde:Pden_3522 periplasmic binding protein YP_003101997.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: hypothetical protein YP_003101998.1 KEGG: PT repeat family protein YP_003101999.1 PFAM: ANTAR domain protein; KEGG: afw:Anae109_3912 multi-sensor signal transduction histidine kinase YP_003102000.1 PFAM: Orn/Lys/Arg decarboxylase domain protein; Orn/Lys/Arg decarboxylase major region; KEGG: bha:BH2640 lysine decarboxylase YP_003102001.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: azo:azo0656 LuxR family transcriptional regulator YP_003102002.1 PFAM: protein of unknown function DUF88; KEGG: dal:Dalk_1950 cold-shock DNA-binding domain protein YP_003102003.1 KEGG: nmu:Nmul_A2202 hypothetical protein YP_003102005.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: scl:sce6912 thiosulfate sulfurtransferase YP_003102006.1 PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 glycolate oxidase YP_003102007.1 KEGG: reh:H16_A2809 peptidase, S33 family YP_003102008.1 KEGG: mrd:Mrad2831_1394 hypothetical protein YP_003102009.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: flavoprotein oxidoreductase protein YP_003102010.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rpi:Rpic_3636 transcriptional regulator, LysR family YP_003102011.1 PFAM: luciferase-like monooxygenase; KEGG: ssuD; alkanesulfonate monooxygenase protein YP_003102012.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: bja:bll6452 acyl-CoA dehydrogenase YP_003102014.1 PFAM: ThiJ/PfpI domain protein; KEGG: scl:sce8831 ThiJ/PfpI family protein YP_003102015.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6302 AraC family transcriptional regulator YP_003102016.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A3489 transcriptional regulator, AraC- family YP_003102018.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_4832 ABC transporter (substrate binding protein) YP_003102019.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_4833 ABC transporter (permease protein) YP_003102020.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_4834 ABC transporter (permease protein) YP_003102021.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: peptide ABC transporter YP_003102022.1 TIGRFAM: hypothetical protein; PFAM: Cna B domain protein; KEGG: gme:Gmet_2043 hypothetical protein YP_003102024.1 KEGG: hypothetical protein YP_003102026.1 KEGG: scl:sce0948 hypothetical protein YP_003102027.1 SMART: helix-turn-helix domain protein; KEGG: bra:BRADO4150 hypothetical protein YP_003102028.1 KEGG: scl:sce8953 hypothetical protein YP_003102029.1 PFAM: glycoside hydrolase family 46; Ricin B lectin; SMART: Ricin B lectin; KEGG: bsu:BSU26890 chitosanase YP_003102030.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: dvm:DvMF_2540 response regulator receiver protein YP_003102031.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: oxidoreductase protein; K07077 YP_003102032.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: aha:AHA_0491 AsnC family transcriptional regulator YP_003102034.1 PFAM: integral membrane protein TerC; KEGG: integral membrane protein TerC YP_003102035.1 PFAM: regulatory protein TetR; KEGG: nha:Nham_3206 TetR family transcriptional regulator YP_003102036.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sme:SMc02891 oxidoreductase transmembrane protein YP_003102037.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_3850 major facilitator transporter YP_003102038.1 KEGG: met:M446_2055 methyl-accepting chemotaxis sensory transducer YP_003102039.1 PFAM: sodium/hydrogen exchanger; KEGG: mxa:MXAN_0260 cation transporter/universal stress family protein YP_003102040.1 KEGG: ade:Adeh_2705 response regulator receiver YP_003102042.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bcb:BCB4264_A0206 drug resistance transporter, Bcr/CflA family YP_003102043.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dac:Daci_5402 transcriptional regulator, TrmB YP_003102044.1 SMART: ATPase AAA; KEGG: scl:sce3623 hypothetical protein YP_003102045.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rru:Rru_A3685 AsnC family transcriptional regulator YP_003102046.1 PFAM: protein of unknown function DUF161; KEGG: rpi:Rpic_4668 protein of unknown function DUF161 YP_003102047.1 KEGG: nha:Nham_0826 hypothetical protein YP_003102048.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bxe:Bxe_A0699 two component transcriptional regulator YP_003102049.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2943 histidine kinase YP_003102050.1 PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rsh:Rsph17029_1579 histidine ammonia-lyase YP_003102051.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: RCJMB04_10a6, FOXRED2; FAD-dependent oxidoreductase domain containing 2 YP_003102052.1 PFAM: AMP-dependent synthetase and ligase; KEGG: vei:Veis_4674 acyl-CoA synthetase YP_003102053.1 PFAM: KR domain protein; beta-ketoacyl synthase; acyl transferase; erythronolide synthase docking; short- chain dehydrogenase/reductase SDR; phosphopantetheine- binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003102054.1 PFAM: beta-ketoacyl synthase; KEGG: eca:ECA0603 type I polyketide synthase YP_003102055.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: scl:sce4847 hypothetical protein YP_003102056.1 PFAM: acyl transferase; KR domain protein; beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003102057.1 PFAM: glycosyl transferase family 28; KEGG: ses:SARI_00205 hypothetical protein YP_003102058.1 PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; KEGG: ses:SARI_00205 hypothetical protein YP_003102059.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: glo:Glov_3377 methyltransferase type 11 YP_003102061.1 KEGG: afw:Anae109_1986 extracellular HAF YP_003102062.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rpt:Rpal_2151 2-nitropropane dioxygenase NPD YP_003102063.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: IVD; IVD (ISOVALERYL-COA-DEHYDROGENASE); K00253 isovaleryl-CoA dehydrogenase YP_003102064.1 PFAM: regulatory protein TetR; KEGG: rpd:RPD_4359 regulatory protein, TetR YP_003102065.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce8696 long-chain fatty-acid-- CoA ligase YP_003102066.1 KEGG: mxa:MXAN_6988 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003102067.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_6987 fatty oxidation complex, alpha subunit YP_003102068.1 PFAM: regulatory protein TetR; KEGG: sme:SMa2387 transcriptional regulator, TetR family YP_003102069.1 KEGG: scl:sce5500 hypothetical protein YP_003102070.1 KEGG: scl:sce5500 hypothetical protein YP_003102071.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mxa:MXAN_1752 isoquinoline 1-oxidoreductase, beta subunit YP_003102072.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: mxa:MXAN_1751 isoquinoline 1-oxidoreductase, alpha subunit YP_003102073.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: atc:AGR_pAT_269 hypothetical protein YP_003102074.1 PFAM: polyprenyl synthetase; KEGG: hne:HNE_0678 polyprenyl synthetase YP_003102075.1 PFAM: UbiA prenyltransferase; KEGG: bbt:BBta_6422 bacteriochlorophyll/chlorophyll a synthase YP_003102076.1 PFAM: monooxygenase FAD-binding; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: bmn:BMA10247_A1734 monooxygenase YP_003102077.1 PFAM: O-methyltransferase; KEGG: sus:Acid_5654 hydroxyneurosporene-O- methyltransferase YP_003102078.1 PFAM: taurine catabolism dioxygenase TauD/TfdA; KEGG: pla:Plav_2004 taurine dioxygenase YP_003102079.1 PFAM: cytochrome P450; KEGG: bca:BCE_2654 cytochrome P450 YP_003102080.1 PFAM: Prenyltransferase/squalene oxidase; KEGG: afw:Anae109_4079 squalene-hopene cyclase YP_003102081.1 PFAM: aminotransferase class I and II; KEGG: scl:sce8915 histidinol-phosphate transaminase YP_003102082.1 PFAM: major facilitator superfamily MFS_1; KEGG: floR; florfenicol/chloramphenicol resistance transporter protein YP_003102083.1 KEGG: dal:Dalk_2807 hypothetical protein YP_003102084.1 KEGG: mxa:MXAN_1195 hypothetical protein YP_003102085.1 KEGG: bcz:BCZK1172 signal peptidase I; TIGRFAM: peptidase S26B, signal peptidase; PFAM: peptidase S24 and S26 domain protein; SMART: LamG domain protein jellyroll fold domain protein YP_003102086.1 KEGG: MUC1.3; hypothetical protein, likely cell wall localized and GPI-anchored mucin like YP_003102087.1 PFAM: SCP-like extracellular; KEGG: noc:Noc_1373 hypothetical protein YP_003102088.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6740 AraC family transcriptional regulator YP_003102090.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4360 regulatory protein TetR YP_003102091.1 PFAM: ThiJ/PfpI domain protein; KEGG: reu:Reut_A0026 ThiJ/PfpI YP_003102093.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: esa:ESA_01962 hypothetical protein YP_003102094.1 PFAM: regulatory protein TetR; KEGG: afw:Anae109_3254 TetR family transcriptional regulator YP_003102095.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: har:HEAR1617 transcriptional regulator (CadR) YP_003102096.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mes:Meso_2933 transcriptional regulator, GntR family YP_003102097.1 PFAM: PEBP family protein; KEGG: PEBP family protein YP_003102098.1 KEGG: bur:Bcep18194_B1559 hypothetical protein YP_003102099.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_A3378 transcriptional regulator, AraC- family YP_003102101.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: swi:Swit_1492 anti-sigma-factor antagonist YP_003102102.1 PFAM: glycosyl transferase group 1; KEGG: cti:RALTA_A0583 glycosyl transferase, group 1 YP_003102103.1 KEGG: lpc:LPC_2297 hypothetical protein YP_003102104.1 KEGG: nar:Saro_3607 short-chain dehydrogenase/reductase SDR YP_003102106.1 PFAM: ferric-uptake regulator; KEGG: afw:Anae109_2251 ferric uptake regulator family protein YP_003102107.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_003102108.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: bha:BH3780 50S ribosomal protein L31 type B YP_003102109.1 PFAM: cobalamin synthesis CobW domain protein; KEGG: bxe:Bxe_A4503 cobalamin synthesis protein/P47K YP_003102110.1 PFAM: Catalase domain protein; KEGG: ppd:Ppro_1932 catalase YP_003102111.1 PFAM: glutamine amidotransferase class-I; KEGG: rpi:Rpic_0998 glutamine amidotransferase class-I YP_003102112.1 PFAM: MOSC domain containing protein; KEGG: rsh:Rsph17029_0572 MOSC domain-containing protein YP_003102113.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: oca:OCAR_6549 MIP YP_003102114.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: oca:OCAR_6548 transcriptional regulator, MarR family YP_003102115.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: reh:H16_B0937 transcriptional regulator, AraC- family YP_003102116.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr3236 oxidoreductase YP_003102117.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B0761 transcriptional regulator, AraC family YP_003102118.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: mlo:mlr3236 oxidoreductase YP_003102119.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: cti:RALTA_A2171 serine/threonine protein phosphatase, P2C family YP_003102120.1 PFAM: NmrA family protein; KEGG: mxa:MXAN_7053 NmrA-like family protein YP_003102121.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: scl:sce1423 LysR family transcriptional regulator YP_003102122.1 PFAM: stress responsive alpha-beta barrel domain protein YP_003102123.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: ccs:CCNA_02209 quinone oxidoreductase YP_003102125.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003102126.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: gdi:GDI1194 two-component system sensor protein YP_003102127.1 KEGG: bcr:BCAH187_A2835 HIT family hydrolase YP_003102128.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0856 L-amino-acid oxidase YP_003102129.1 PFAM: ABC transporter; KEGG: rpb:RPB_3405 hypothetical protein YP_003102130.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: plu:plu2673 iron transport system ATP-binding protein YfeB YP_003102131.1 PFAM: periplasmic solute binding protein; KEGG: rsq:Rsph17025_0249 periplasmic solute binding protein YP_003102132.1 TIGRFAM: thioester reductase domain protein; PFAM: short-chain dehydrogenase/reductase SDR; beta- ketoacyl synthase; Male sterility domain; KR domain protein; acyl transferase; erythronolide synthase docking; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: eca:ECA0602 type I polyketide synthase YP_003102133.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; erythronolide synthase docking; phosphopantetheine-binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003102134.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; erythronolide synthase docking; NAD- dependent epimerase/dehydratase; phosphopantetheine- binding; KEGG: mxa:MXAN_4527 polyketide synthase YP_003102135.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; NAD-dependent epimerase/dehydratase; phosphopantetheine-binding; KEGG: eca:ECA0602 type I polyketide synthase YP_003102136.1 KEGG: bur:Bcep18194_C6844 regulator of polyketide synthase expression YP_003102137.1 PFAM: aminotransferase class-III; KEGG: ppu:PP_2782 pyridoxalphosphate dependent aminotransferase, class III YP_003102138.1 KEGG: pap:PSPA7_2619 hypothetical protein YP_003102139.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: pol:Bpro_2060 acyl-CoA dehydrogenase, C- terminal type2 YP_003102140.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: nar:Saro_1462 flavin reductase-like, FMN- binding YP_003102142.1 PFAM: ribonucleotide reductase; KEGG: bba:Bd1983 ribonucleotide-diphosphate reductase small chain YP_003102143.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: ade:Adeh_3289 SARP family transcriptional regulator YP_003102144.1 SMART: regulatory protein LuxR; KEGG: nha:Nham_1032 LuxR family transcriptional regulator YP_003102145.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0856 L-amino-acid oxidase YP_003102146.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: rpd:RPD_2341 NmrA-like YP_003102147.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mno:Mnod_1588 transcriptional regulator, AraC family YP_003102148.1 PFAM: protein of unknown function DUF81; KEGG: sfu:Sfum_1521 protein of unknown function DUF81 YP_003102150.1 SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003102151.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: xcv:XCV0256 short chain dehydrogenase YP_003102152.1 KEGG: bbt:BBta_5025 hypothetical protein YP_003102153.1 PFAM: regulatory protein TetR; KEGG: bcz:BCZK4730 TetR family transcriptional regulator YP_003102154.1 PFAM: alpha/beta hydrolase fold; KEGG: hypothetical protein YP_003102155.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: afw:Anae109_2808 NADP oxidoreductase coenzyme F420-dependent YP_003102156.1 PFAM: regulatory protein TetR; KEGG: atc:AGR_pAT_729 hypothetical protein YP_003102157.1 PFAM: oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: scl:sce7711 hypothetical protein YP_003102158.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_1079 TetR family transcriptional regulator YP_003102159.1 KEGG: scl:sce9100 hypothetical protein YP_003102160.1 PFAM: AMP-dependent synthetase and ligase; KEGG: afw:Anae109_0968 AMP-dependent synthetase and ligase YP_003102161.1 KEGG: similar to hyphally regulated cell wall protein HYR1p YP_003102163.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: jan:Jann_1295 antibiotic biosynthesis monooxygenase YP_003102164.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_2611 TetR family transcriptional regulator YP_003102165.1 PFAM: nitroreductase; KEGG: pla:Plav_2473 nitroreductase YP_003102167.1 KEGG: rle:RL4432 hypothetical protein YP_003102168.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: pap:PSPA7_0145 serine/threonine protein kinase PpkA YP_003102169.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: zinc-binding dehydrogenase YP_003102170.1 KEGG: rle:pRL120266 hypothetical protein YP_003102171.1 PFAM: major facilitator superfamily MFS_1; KEGG: cvi:CV_1398 hypothetical protein YP_003102172.1 PFAM: ROK family protein; KEGG: scl:sce7667 ROK family transcriptional regulator YP_003102173.1 KEGG: mpo:Mpop_1521 short-chain dehydrogenase/reductase SDR YP_003102174.1 KEGG: bja:blr2505 hypothetical protein YP_003102175.1 KEGG: ade:Adeh_2548 L-lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_003102176.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: scl:sce8257 non-ribosomal peptide synthetase YP_003102177.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: afw:Anae109_4239 monooxygenase FAD-binding YP_003102178.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pen:PSEEN0980 L-ornithine 5-/L-lysine 6- monooxygenase YP_003102179.1 PFAM: Negative transcriptional regulator; KEGG: pmy:Pmen_0131 FMN-binding negative transcriptional regulator YP_003102180.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; KEGG: hch:HCH_03445 non-ribosomal peptide synthetase modules and related protein YP_003102181.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_2815 major facilitator transporter YP_003102182.1 KEGG: rpe:RPE_0078 carbamoyltransferase YP_003102183.1 PFAM: Thioesterase; KEGG: mxa:MXAN_4290 thioesterase YP_003102184.1 PFAM: cytochrome P450; KEGG: scl:sce7867 cytochrome P450 CYP124E1 YP_003102185.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: mxa:MXAN_4601 non-ribosomal peptide synthase YP_003102186.1 KEGG: bja:blr5743 hypothetical protein YP_003102187.1 PFAM: GHMP kinase; KEGG: bvi:Bcep1808_5165 GHMP kinase YP_003102188.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3618 non-ribosomal peptide synthetase YP_003102189.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: bpd:BURPS668_2111 L-allo-threonine aldolase YP_003102190.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; protein of unknown function DUF201; phosphoribosylglycinamide synthetase; KEGG: bps:BPSL1715 argininosuccinate lyase YP_003102191.1 PFAM: fumarate lyase; KEGG: rsq:Rsph17025_3642 hypothetical protein YP_003102192.1 PFAM: MbtH domain protein; KEGG: rpc:RPC_1861 MbtH-like protein YP_003102193.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: aav:Aave_3731 amino acid adenylation domain YP_003102195.1 PFAM: condensation domain protein; KEGG: mxa:MXAN_4415 non-ribosomal peptide synthetase/polyketide synthase YP_003102196.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: mxa:MXAN_3779 non-ribosomal peptide synthetase/polyketide synthase YP_003102197.1 KEGG: mlo:mlr3218 hypothetical protein YP_003102198.1 KEGG: bcz:BCZK2539 UvrD/Rep helicase family protein YP_003102199.1 PFAM: MMPL domain protein; KEGG: bsu:BSU05430 hypothetical protein YP_003102200.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003102201.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003102202.1 PFAM: VanZ family protein; KEGG: bha:BH2294 hypothetical protein YP_003102203.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: sfu:Sfum_2006 integral membrane sensor signal transduction histidine kinase YP_003102204.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sus:Acid_5477 two component transcriptional regulator YP_003102205.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mxa:MXAN_5466 peptidase, S1E (streptogrisin A) subfamily YP_003102206.1 PFAM: cellulose-binding family II; lipolytic protein G-D-S-L family; SMART: cellulose-binding family II; KEGG: scl:sce7021 endoglucanase YP_003102209.1 KEGG: GG22683 gene product from transcript GG22683- RA YP_003102210.1 KEGG: rru:Rru_A3404 TrkA domain-containing protein YP_003102211.1 PFAM: alpha/beta hydrolase fold; KEGG: bsu:BSU03260 hypothetical protein YP_003102212.1 KEGG: bsu:BSU02240 extracellular metalloprotease YP_003102213.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sit:TM1040_1898 twin-arginine translocation pathway signal YP_003102215.1 KEGG: Gpr125; G protein-coupled receptor 125; K08462 G protein-coupled receptor 125 YP_003102220.1 KEGG: rso:RS03147 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; SMART: PAS domain containing protein; regulatory protein LuxR YP_003102221.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce5395 aminoglycoside phosphotransferase YP_003102223.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: hne:HNE_0812 oxidoreductase, NAD-binding YP_003102224.1 KEGG: scl:sce0971 hypothetical protein YP_003102225.1 KEGG: sfu:Sfum_3460 acyl carrier protein YP_003102226.1 PFAM: Radical SAM domain protein; KEGG: sfu:Sfum_2252 radical SAM domain protein YP_003102227.1 PFAM: condensation domain protein; KEGG: bmn:BMA10247_A0621 peptide synthetase YP_003102232.1 TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: rso:RS05482 rhs-related transmembrane protein YP_003102234.1 PFAM: integrase family protein; KEGG: aeh:Mlg_1488 tyrosine recombinase XerD YP_003102235.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; FG-GAP repeat protein; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: acp:A2cp1_3748 hypothetical protein YP_003102236.1 PFAM: protein of unknown function DUF312; KEGG: SNF2 superfamily protein YP_003102238.1 KEGG: bxe:Bxe_A3516 transposase YP_003102239.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: afw:Anae109_3372 hypothetical protein YP_003102240.1 KEGG: mucin-associated surface protein (MASP) YP_003102241.1 KEGG: mca:MCA2681 hypothetical protein YP_003102251.1 KEGG: hypothetical protein LOC743833 YP_003102254.1 SMART: helix-turn-helix domain protein; KEGG: pin:Ping_0445 colicin uptake-like protein YP_003102257.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pmy:Pmen_3998 phosphoglycolate phosphatase YP_003102259.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mno:Mnod_6944 phosphoglycolate phosphatase YP_003102260.1 KEGG: sus:Acid_3202 alpha/beta hydrolase fold YP_003102261.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003102262.1 KEGG: numb; numb homolog (Drosophila); K06057 numb YP_003102264.1 KEGG: scl:sce2557 secreted protein YP_003102265.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kpn:KPN_01751 acetyltransferase YP_003102266.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: pfo:Pfl01_3628 hypothetical protein YP_003102267.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein; KEGG: pap:PSPA7_2859 peptide synthase YP_003102268.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: dac:Daci_4753 amino acid adenylation domain- containing protein YP_003102269.1 KEGG: sus:Acid_4167 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase YP_003102270.1 PFAM: aminotransferase class I and II; KEGG: hch:HCH_01676 transcriptional regulator YP_003102271.1 PFAM: major facilitator superfamily MFS_1; KEGG: kpe:KPK_3480 multidrug resistance protein MdtH YP_003102272.1 PFAM: MbtH domain protein; KEGG: scl:sce3255 hypothetical protein YP_003102273.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_2357 D-cysteine desulfhydrase YP_003102274.1 KEGG: bte:BTH_II0297 LpqC YP_003102275.1 PFAM: cytochrome P450; KEGG: rpd:RPD_0041 cytochrome P450 YP_003102276.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: scl:sce8759 hypothetical protein YP_003102277.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: scl:sce7671 (S)-2-hydroxy-acid oxidase YP_003102278.1 PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein YP_003102279.1 PFAM: MbtH domain protein; KEGG: cvi:CV_2232 MbtH-like protein YP_003102280.1 KEGG: hypothetical protein YP_003102281.1 PFAM: monooxygenase FAD-binding; KEGG: pag:PLES_17361 FAD-dependent monooxygenase YP_003102282.1 PFAM: short-chain dehydrogenase/reductase SDR; condensation domain protein; KEGG: pau:PA14_21000 hypothetical protein YP_003102283.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; beta- ketoacyl synthase; alcohol dehydrogenase GroES domain protein; short-chain dehydrogenase/reductase SDR; condensation domain protein; acyl transferase; KR domain protein; alcohol dehydrogenase zinc-binding domain protein; Thioesterase; phosphopantetheine-binding; KEGG: pae:PA3327 non-ribosomal peptide synthetase YP_003102284.1 PFAM: cytochrome P450; KEGG: rde:RD1_3506 cytochrome P450 family protein YP_003102285.1 PFAM: carboxylesterase type B; KEGG: rpe:RPE_0251 carboxylesterase, type B YP_003102286.1 KEGG: scl:sce0661 mannan endo-1,4-beta-mannosidase YP_003102287.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: scl:sce0662 LacI family transcription regulator YP_003102288.1 PFAM: extracellular solute-binding protein family 1; KEGG: bha:BH3845 ABC transporter (substrate-binding protein) YP_003102289.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rlt:Rleg2_5350 binding-protein-dependent transport systems inner membrane component YP_003102290.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0946 binding-protein-dependent transport systems inner membrane component YP_003102291.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: sus:Acid_6936 glycoside hydrolase family 3 protein YP_003102292.1 PFAM: conserved hypothetical protein; KEGG: hypothetical LOC367592; K09704 hypothetical protein YP_003102293.1 PFAM: regulatory protein TetR; KEGG: mlo:mll1924 transcription regulator YP_003102294.1 PFAM: monooxygenase FAD-binding; KEGG: sme:SMc02891 oxidoreductase transmembrane protein YP_003102295.1 KEGG: gur:Gura_2349 hypothetical protein YP_003102297.1 PFAM: major facilitator superfamily MFS_1; KEGG: pst:PSPTO_4522 hypothetical protein YP_003102298.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpe:BP2854 short chain dehydrogenase YP_003102299.1 PFAM: regulatory protein TetR; KEGG: acp:A2cp1_2482 transcriptional regulator, TetR family YP_003102300.1 PFAM: Ricin B lectin; glycoside hydrolase family 5; SMART: Ricin B lectin; KEGG: scl:sce0748 Ricin precursor and poly(3- hydroxybutyrate) depolymerase fusion YP_003102301.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: scl:sce7498 short chain dehydrogenase YP_003102302.1 PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; KEGG: cvi:CV_4236 MerR family transcriptional regulator YP_003102303.1 PFAM: regulatory protein MerR; PBS lyase HEAT domain protein repeat-containing protein; SMART: regulatory protein MerR; PBS lyase HEAT domain protein repeat-containing protein; KEGG: bur:Bcep18194_B2665 MerR family transcriptional regulator YP_003102304.1 KEGG: ppw:PputW619_5008 heat repeat-containing PBS lyase YP_003102305.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pzu:PHZ_c2512 long-chain-fatty-acid--CoA ligase YP_003102306.1 KEGG: bsu:BSU35070 hypothetical protein YP_003102307.1 PFAM: methyltransferase type 12; methyltransferase type 11; MCP methyltransferase CheR-type; KEGG: pfl:PFL_1036 ToxA protein YP_003102308.1 PFAM: protein of unknown function DUF1330; KEGG: pde:Pden_4583 protein of unknown function DUF1330 YP_003102309.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator, XRE family YP_003102310.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpt:Bpet4146 LysR family transcriptional regulator YP_003102311.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: met:M446_6836 threonine dehydratase YP_003102312.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 42 domain 5 loop region; glycosyl hydrolase family 98 carbohydrate binding module; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; SMART: glycosyl hydrolase family 98 carbohydrate binding module; LamG domain protein jellyroll fold domain protein; KEGG: sus:Acid_4607 beta-galactosidase YP_003102314.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_0902 two component transcriptional regulator, LuxR family YP_003102315.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mlo:mlr2819 oxidoreductase YP_003102316.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bch:Bcen2424_4743 MarR family transcriptional regulator YP_003102317.1 PFAM: amino acid permease-associated region; KEGG: lpc:LPC_0052 amino acid transporter, permease YP_003102318.1 KEGG: sat:SYN_02434 hydrolase or acyltransferase YP_003102320.1 PFAM: glycosyl transferase group 1; KEGG: gur:Gura_3220 glycosyl transferase, group 1 YP_003102321.1 PFAM: glycosyl transferase family 2; KEGG: bcm:Bcenmc03_0849 glycosyl transferase family protein YP_003102324.1 TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3 YP_003102325.1 PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B3953 major facilitator transporter YP_003102326.1 PFAM: protein of unknown function DUF201; phosphoribosylglycinamide synthetase; KEGG: scl:sce5193 hypothetical protein YP_003102327.1 PFAM: major facilitator superfamily MFS_1; KEGG: ank:AnaeK_4388 major facilitator superfamily MFS_1 YP_003102328.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sdn:Sden_3736 AMP-dependent synthetase and ligase YP_003102329.1 PFAM: phosphopantetheine-binding; KEGG: mxa:MXAN_3631 polyketide synthase type I YP_003102330.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bcy:Bcer98_3668 alpha/beta hydrolase domain- containing protein YP_003102331.1 PFAM: transketolase; KEGG: bbt:BBta_4462 pyruvate dehydrogenase subunit beta YP_003102332.1 TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: reu:Reut_B5023 3-carboxy-cis,cis-muconate cycloisomerase YP_003102333.1 KEGG: hypothetical protein YP_003102334.1 KEGG: bcz:BCZK1714 hypothetical protein YP_003102335.1 KEGG: bja:blr1218 hypothetical protein YP_003102336.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: short chain dehydrogenase protein YP_003102338.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dps:DP1551 hypothetical protein YP_003102339.1 PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: bcy:Bcer98_3668 alpha/beta hydrolase domain- containing protein YP_003102340.1 KEGG: xcb:XC_3673 hypothetical protein YP_003102341.1 PFAM: pectinesterase; KEGG: xop:PXO_00373 pectinesterase YP_003102342.1 PFAM: lipolytic protein G-D-S-L family; KEGG: bsu:BSU07020 hypothetical protein YP_003102343.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rlt:Rleg2_1526 hypothetical protein YP_003102344.1 KEGG: bha:BH0581 two-component response regulator YP_003102346.1 KEGG: ilo:IL0311 ABC-type multidrug transport system, permease component YP_003102347.1 PFAM: ABC transporter; KEGG: ccs:CCNA_01205 ABC transporter ATP-binding protein YP_003102348.1 KEGG: atc:AGR_pAT_397 hypothetical protein YP_003102349.1 PFAM: luciferase-like monooxygenase; KEGG: bcj:BCAM1565 monooxygenase YP_003102350.1 KEGG: sun:SUN_0435 hypothetical protein YP_003102351.1 PFAM: lipolytic protein G-D-S-L family; KEGG: hypothetical protein YP_003102352.1 PFAM: lipolytic protein G-D-S-L family; KEGG: scl:sce5722 endo-1,4-beta-glucanase YP_003102354.1 KEGG: scl:sce8365 hypothetical protein YP_003102356.1 KEGG: abo:ABO_1927 hypothetical protein YP_003102357.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_5176 serine/threonine protein kinase YP_003102358.1 PFAM: cellulose-binding family II; SMART: cellulose-binding family II; KEGG: ccs:CCNA_03254 pectate lyase YP_003102359.1 PFAM: regulatory protein TetR; KEGG: cvi:CV_0711 TetR family transcriptional regulator YP_003102360.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eba:ebA2050 ADP-producing CoA ligase, feruloyl-CoA synthetase YP_003102361.1 NADP-dependent semialdehyde dehydrogenase; part of alternative pathway from alpha-ketoglutarate to succinate YP_003102362.1 KEGG: scl:sce5500 hypothetical protein YP_003102363.1 PFAM: beta-lactamase; KEGG: scl:sce3869 hypothetical protein YP_003102364.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: bme:BMEI1583 sensor protein DegS YP_003102365.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: bsu:BSU08300 hypothetical protein YP_003102367.1 PFAM: beta-lactamase; KEGG: scl:sce3868 alkaline D-peptidase YP_003102368.1 KEGG: eba:ebA5037 hypothetical protein YP_003102369.1 PFAM: chitin-binding domain 3 protein; KEGG: cvi:CV_0554 carbohydrate-binding protein YP_003102370.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: sme:SMa0464 adenylate/guanylate cyclase YP_003102371.1 PFAM: aminotransferase class-III; KEGG: ppu:PP_2782 pyridoxalphosphate dependent aminotransferase, class III YP_003102372.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bsu:BSU18260 hypothetical protein YP_003102373.1 KEGG: pap:PSPA7_2619 hypothetical protein YP_003102374.1 TIGRFAM: thioester reductase domain protein; PFAM: Male sterility domain; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; 3- beta hydroxysteroid dehydrogenase/isomerase; acyl transferase; KR domain protein; erythronolide synthase docking; phosphopantetheine-binding; NAD-dependent epimerase/dehydratase; KEGG: pst:PSPTO_4687 coronafacic acid polyketide synthetase II YP_003102375.1 PFAM: acyl transferase; short-chain dehydrogenase/reductase SDR; beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding; KEGG: met:M446_0170 beta-ketoacyl synthase YP_003102376.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bpy:Bphyt_1723 flavin reductase domain protein FMN-binding YP_003102377.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding YP_003102378.1 PFAM: NmrA family protein; KEGG: afw:Anae109_3754 NmrA family protein YP_003102379.1 PFAM: acyl-CoA dehydrogenase type 2 domain; KEGG: rsh:Rsph17029_3744 acyl-CoA dehydrogenase type 2 YP_003102380.1 PFAM: major facilitator superfamily MFS_1; KEGG: transporter protein YP_003102381.1 PFAM: helix-turn-helix HxlR type; KEGG: hypothetical protein YP_003102382.1 KEGG: pap:PSPA7_2619 hypothetical protein YP_003102383.1 PFAM: acyl-CoA dehydrogenase type 2 domain; acyl- CoA dehydrogenase domain protein; KEGG: rlt:Rleg2_5725 acyl-CoA dehydrogenase type 2 domain YP_003102384.1 KEGG: sus:Acid_5966 hypothetical protein YP_003102385.1 KEGG: aav:Aave_2096 transcriptional regulator, ArsR family YP_003102386.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: sde:Sde_0644 hypothetical protein YP_003102387.1 KEGG: rme:Rmet_4641 ATP-dependent endonuclease of the OLD family-like protein YP_003102388.1 PFAM: protein of unknown function DUF1680; KEGG: hypothetical protein YP_003102389.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: scl:sce8667 hypothetical protein YP_003102390.1 PFAM: alpha/beta hydrolase fold; KEGG: rle:pRL100270 proline iminopeptidase YP_003102391.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: dol:Dole_0940 oligopeptide/dipeptide ABC transporter, ATPase subunit YP_003102392.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: bja:bll2870 ABC transporter ATP-binding protein YP_003102393.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: peptide transport system permease protein; K02033 peptide/nickel transport system permease protein YP_003102394.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gme:Gmet_1236 binding-protein dependent transport system inner membrane protein YP_003102395.1 PFAM: extracellular solute-binding protein family 5; KEGG: rle:pRL110448 substrate-binding ABC transporter protein YP_003102396.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bbr:BB0470 GntR family transcriptional regulator YP_003102397.1 PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_02881 oxoglutarate semialdehyde dehydrogenase YP_003102398.1 PFAM: proline racemase; KEGG: bat:BAS2643 proline racemase YP_003102399.1 PFAM: dihydrodipicolinate synthetase; KEGG: swd:Swoo_2822 dihydrodipicolinate synthetase YP_003102400.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bph:Bphy_4670 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003102401.1 KEGG: vei:Veis_0721 FAD dependent oxidoreductase YP_003102402.1 PFAM: FAD dependent oxidoreductase; KEGG: bce:BC2836 sarcosine oxidase beta subunit YP_003102404.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate YP_003102405.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bac:BamMC406_6022 LacI family transcription regulator YP_003102406.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_003102407.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: scl:sce1158 hypothetical protein YP_003102408.1 KEGG: glycosyl hydrolase family 10 protein; PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II YP_003102411.1 KEGG: ade:Adeh_2319 hypothetical protein YP_003102412.1 KEGG: pzu:PHZ_c0663 type II secretion system protein N YP_003102413.1 KEGG: smd:Smed_1835 hypothetical protein YP_003102415.1 KEGG: ank:AnaeK_3866 hypothetical protein YP_003102416.1 KEGG: pna:Pnap_3074 hypothetical protein YP_003102417.1 KEGG: ank:AnaeK_1466 hypothetical protein YP_003102418.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmr:Mmar10_2631 ABC transporter YP_003102419.1 KEGG: mpo:Mpop_3497 integral membrane protein MviN YP_003102420.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pla:Plav_1868 RNA polymerase sigma factor RpoE YP_003102421.1 KEGG: rme:Rmet_3224 hypothetical protein YP_003102422.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: abo:ABO_1327 pyridine nucleotide transhydrogenase, B subunit YP_003102423.1 KEGG: afw:Anae109_2972 pyridine nucleotide transhydrogenase alpha subunit-like protein YP_003102424.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: tgr:Tgr7_0268 NAD(P)(+) transhydrogenase (AB- specific) YP_003102425.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sus:Acid_0202 hypothetical protein YP_003102426.1 KEGG: bha:BH0230 hypothetical protein YP_003102427.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: oca:OCAR_7249 copper-containing nitrite reductase YP_003102428.1 KEGG: tbd:Tbd_2176 hypothetical protein YP_003102429.1 KEGG: dar:Daro_3949 hypothetical protein YP_003102430.1 KEGG: ank:AnaeK_1843 SpoIID/LytB domain protein YP_003102431.1 PFAM: peptidase M48 Ste24p; KEGG: acp:A2cp1_3025 peptidase M48 Ste24p YP_003102432.1 KEGG: pla:Plav_2920 ubiquinol-cytochrome C chaperone YP_003102433.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bba:Bd3234 carboxypeptidase T precursor YP_003102435.1 SMART: calcium-binding EF-hand-containing protein; KEGG: Hypothetical protein CBG02402 YP_003102436.1 TIGRFAM: methyltransferase; PFAM: O-methyltransferase; KEGG: bur:Bcep18194_B1573 protein of unknown function Mtu_121 YP_003102437.1 KEGG: bvi:Bcep1808_5626 transposase, IS4 family protein YP_003102438.1 PFAM: DoxX family protein; KEGG: scl:sce3628 hypothetical protein YP_003102439.1 PFAM: regulatory protein TetR; KEGG: met:M446_2111 TetR family transcriptional regulator YP_003102440.1 KEGG: dar:Daro_3601 hypothetical protein YP_003102442.1 PFAM: periplasmic solute binding protein; KEGG: bra:BRADO6268 ABC transporter substrate- binding protein YP_003102443.1 KEGG: GK21128 gene product from transcript GK21128- RA YP_003102444.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcz:pE33L54_0038 manganese ABC transporter, ATP-binding protein YP_003102445.1 PFAM: ABC transporter; KEGG: bha:BH1390 hypothetical protein YP_003102446.1 KEGG: pin:Ping_0445 colicin uptake-like protein YP_003102447.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: cko:CKO_00925 hypothetical protein YP_003102448.1 PFAM: protein of unknown function DUF916 cell surface KEGG: bcj:BCAM2172 patatin-like phospholipase YP_003102449.1 KEGG: mno:Mnod_2545 hypothetical protein YP_003102450.1 KEGG: similar to mucin 2; K10955 intestinal mucin- 2 YP_003102451.1 PFAM: major facilitator superfamily MFS_1; KEGG: yen:YE2035 membrane transport protein YP_003102452.1 PFAM: methyltransferase small; KEGG: rpe:RPE_0637 methyltransferase small YP_003102453.1 KEGG: pca:Pcar_1737 hypothetical protein YP_003102454.1 PFAM: GHMP kinase; KEGG: mlo:mlr9540 hypothetical protein YP_003102455.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bpd:BURPS668_2001 cysteine synthase YP_003102456.1 PFAM: periplasmic binding protein; KEGG: ABC transporter substrate binding protein (iron); K02016 iron complex transport system substrate-binding protein YP_003102457.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcj:BCAL1346 Fe uptake system ATP- binding protein YP_003102458.1 PFAM: transport system permease protein; KEGG: dac:Daci_3791 transport system permease protein YP_003102459.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: mca:MCA3003 UbiE/COQ5 family methlytransferase YP_003102460.1 PFAM: regulatory protein TetR; KEGG: rec:RHECIAT_CH0000638 probable transcriptional regulator protein, TetR family YP_003102461.1 PFAM: amidase; KEGG: bpt:Bpet1417 glutamyl-tRNA(Gln) amidotransferase subunit A YP_003102462.1 PFAM: beta-lactamase domain protein; KEGG: rpt:Rpal_4911 beta-lactamase domain protein YP_003102463.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: aba:Acid345_1672 methyl-accepting chemotaxis sensory transducer YP_003102464.1 KEGG: reh:H16_A1489 DNA topoisomerase IB YP_003102465.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pag:PLES_56121 transcriptional regulator YP_003102466.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sus:Acid_6073 short-chain dehydrogenase/reductase SDR YP_003102467.1 PFAM: amidohydrolase 2; KEGG: hypothetical protein; K07046 YP_003102468.1 PFAM: regulatory protein TetR; KEGG: ank:AnaeK_1572 regulatory protein TetR YP_003102469.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: acp:A2cp1_1649 NAD-dependent epimerase/dehydratase YP_003102470.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: par:Psyc_1255 TolB periplamsic protein YP_003102472.1 PFAM: monooxygenase FAD-binding; KEGG: pde:Pden_3048 hypothetical protein YP_003102473.1 PFAM: transcriptional regulator domain protein; transcriptional activator domain; KEGG: afw:Anae109_3667 ATPase-like protein YP_003102474.1 PFAM: hypothetical protein; KEGG: gdi:GDI1794 hypothetical protein YP_003102475.1 PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_1369 major facilitator superfamily MFS_1 YP_003102476.1 PFAM: regulatory protein TetR; KEGG: bac:BamMC406_5866 TetR family transcriptional regulator YP_003102477.1 PFAM: regulatory protein TetR; KEGG: sml:Smlt4073 TetR family regulatory protein YP_003102478.1 KEGG: afw:Anae109_0991 major facilitator transporter YP_003102479.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein YP_003102480.1 KEGG: mxa:MXAN_2741 hypothetical protein YP_003102481.1 KEGG: swi:Swit_3769 NAD-dependent epimerase/dehydratase YP_003102482.1 PFAM: restriction endonuclease; KEGG: acr:Acry_3352 restriction endonuclease YP_003102484.1 KEGG: pmy:Pmen_1048 signal transduction protein YP_003102485.1 KEGG: mlo:mll6125 cytochrome P450-family protein YP_003102486.1 PFAM: protein of unknown function ATP binding; KEGG: dac:Daci_0776 protein of unknown function ATP binding YP_003102487.1 PFAM: protein of unknown function DUF742 YP_003102488.1 PFAM: Roadblock/LC7 family protein YP_003102489.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: hypothetical protein YP_003102490.1 KEGG: ppw:PputW619_3130 hypothetical protein YP_003102491.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: atc:AGR_L_1778 hypothetical protein YP_003102492.1 PFAM: cupin YP_003102493.1 KEGG: sus:Acid_2874 transmembrane prediction YP_003102494.1 KEGG: spe:Spro_1142 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003102495.1 PFAM: xylose isomerase; KEGG: hypothetical protein YP_003102496.1 KEGG: ilo:IL1495 hypothetical protein YP_003102497.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pol:Bpro_4368 transcriptional regulator, LysR family YP_003102498.1 PFAM: aminotransferase class-III; KEGG: bxe:Bxe_B2675 aminotransferase YP_003102499.1 KEGG: rsq:Rsph17025_0144 chromosome segregation protein SMC YP_003102501.1 PFAM: Ricin B lectin; SMART: Ricin B lectin; KEGG: bha:BH0494 exopolygalacturonate lyase YP_003102503.1 KEGG: rfr:Rfer_3942 serine/threonine protein kinase with CHASE2 sensor YP_003102504.1 KEGG: YALI0B22110p YP_003102505.1 KEGG: hypothetical protein YP_003102506.1 PFAM: protein of unknown function DUF1697; KEGG: cak:Caul_2927 hypothetical protein YP_003102507.1 PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein YP_003102508.1 KEGG: Eln; elastin YP_003102509.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1276 glycosyl transferase family 2 YP_003102510.1 PFAM: regulatory protein TetR; KEGG: msl:Msil_3313 transcriptional regulator, TetR family YP_003102511.1 PFAM: NmrA family protein; KEGG: scl:sce0707 hypothetical protein YP_003102512.1 KEGG: bcr:BCAH187_A3347 hypothetical protein YP_003102514.1 PFAM: glycosyl transferase family 28; KEGG: afw:Anae109_0485 glycosyl transferase family protein YP_003102515.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: scl:sce8590 prolyl oligopeptidase YP_003102516.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short- chain dehydrogenase/reductase SDR; KEGG: ppd:Ppro_3571 NAD-dependent epimerase/dehydratase YP_003102517.1 PFAM: glycosyl transferase family 28; KEGG: afw:Anae109_0485 glycosyl transferase family protein YP_003102518.1 PFAM: cytochrome P450; KEGG: scl:sce8913 cytochrome P450 CYP109C2 YP_003102521.1 PFAM: lanthionine synthetase C family protein; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; KEGG: smt:Smal_2130 serine/threonine protein kinase YP_003102522.1 PFAM: flavoprotein; KEGG: tgr:Tgr7_0102 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_003102523.1 PFAM: MaoC domain protein dehydratase; KEGG: reu:Reut_A1571 MaoC-like dehydratase YP_003102524.1 Catalyzes a key regulatory step in fatty acid biosynthesis YP_003102525.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tbd:Tbd_1549 3-oxoacyl-[acyl-carrier-protein] reductase YP_003102526.1 PFAM: acyl transferase; beta-ketoacyl synthase; KR domain protein; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_4528 polyketide synthase YP_003102527.1 KEGG: gox:GOX1622 transposase YP_003102528.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bvi:Bcep1808_2651 AMP-dependent synthetase and ligase YP_003102529.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: mgm:Mmc1_1872 3-oxoacyl-[acyl-carrier- protein] synthase II YP_003102530.1 PFAM: Aldehyde Dehydrogenase; KEGG: plu:plu3928 hypothetical protein YP_003102531.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: eba:ebA4751 acetolactate synthase catalytic subunit YP_003102532.1 PFAM: AMP-dependent synthetase and ligase; KEGG: scl:sce8262 non-ribosomal peptide synthetase YP_003102533.1 PFAM: phosphopantetheine-binding; KEGG: pcr:Pcryo_0517 acyl carrier protein YP_003102534.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: bsu:BSU34820 hypothetical protein YP_003102535.1 PFAM: regulatory protein TetR; KEGG: bha:BH2103 hypothetical protein YP_003102536.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1779 major facilitator superfamily multidrug efflux transporter YP_003102537.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmv:BMASAVP1_0279 EmrB/QacA family drug resistance transporter YP_003102538.1 PFAM: NHL repeat containing protein; KEGG: bxe:Bxe_C0275 hypothetical protein YP_003102539.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pzu:PHZ_c1832 monooxygenase YP_003102540.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: kpe:KPK_1169 DNA-binding protein YP_003102541.1 TIGRFAM: YD repeat protein; SMART: Hedgehog/intein hint domain protein; KEGG: dal:Dalk_1487 YD repeat protein YP_003102542.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: bat:BAS1022 wall-associated protein YP_003102544.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: glycoside hydrolase, family 3, N- terminal:glycoside hydrolase, family 3, C-terminal YP_003102545.1 PFAM: regulatory protein TetR; KEGG: psb:Psyr_3154 regulatory protein, TetR YP_003102546.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rlt:Rleg2_6394 GCN5-related N- acetyltransferase YP_003102549.1 SMART: ATPase AAA; KEGG: mxa:MXAN_4188 adenylate/guanylate cyclase domain protein YP_003102551.1 KEGG: mxa:MXAN_2888 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003102552.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_3769 hydrolase, NUDIX family YP_003102553.1 KEGG: pla:Plav_1718 shikimate kinase YP_003102554.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: dal:Dalk_4445 peptidase M20 YP_003102556.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: sus:Acid_3105 IclR family transcriptional regulator YP_003102557.1 PFAM: purine or other phosphorylase family 1; KEGG: aha:AHA_3168 uridine phosphorylase YP_003102558.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sat:SYN_00367 sulfate transport ATP-binding protein YP_003102559.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bav:BAV0644 ABC transporter, permease protein YP_003102560.1 PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: mes:Meso_0815 sulfonate transport system substrate-binding protein YP_003102561.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1169 ABC transporter permease protein YP_003102562.1 KEGG: type I polyketide synthase; K09936 hypothetical protein YP_003102563.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: scl:sce4269 dihydroorotase YP_003102564.1 PFAM: Kelch repeat-containing protein; Kelch repeat protein; SMART: Kelch repeat-containing protein; KEGG: mex:Mext_0574 kelch repeat-containing protein YP_003102565.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ade:Adeh_2212 LysR family transcriptional regulator YP_003102566.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: scl:sce5237 protein kinase YP_003102568.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: bam:Bamb_4722 NADH:flavin oxidoreductase/NADH oxidase YP_003102569.1 PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: azc:AZC_0116 regulatory protein YP_003102570.1 KEGG: bsu:BSU26920 hypothetical protein YP_003102572.1 KEGG: bce:BC3289 hypothetical protein YP_003102573.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: reu:Reut_A1539 LuxR family transcriptional regulator YP_003102575.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: jan:Jann_4133 GntR family transcriptional regulator YP_003102576.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rsq:Rsph17025_3334 hypothetical protein YP_003102577.1 PFAM: transport system permease protein; KEGG: dac:Daci_3152 transport system permease protein YP_003102578.1 PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD YP_003102579.1 PFAM: periplasmic binding protein; KEGG: bsu:BSU08440 hypothetical protein YP_003102580.1 KEGG: mxa:MXAN_2857 lantibiotic modification protein YP_003102581.1 PFAM: aminotransferase class IV; KEGG: afw:Anae109_1102 branched-chain amino acid aminotransferase YP_003102582.1 PFAM: luciferase-like monooxygenase; KEGG: mxa:MXAN_4001 non-ribosomal peptide synthase/polyketide synthase YP_003102583.1 PFAM: beta-ketoacyl synthase; KR domain protein; acyl transferase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KEGG: mxa:MXAN_3620 polyketide synthase type I YP_003102584.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_4414 non-ribosomal peptide synthase YP_003102585.1 PFAM: peptidase S45 penicillin amidase; KEGG: scl:sce8259 penicillin amidase YP_003102586.1 PFAM: condensation domain protein; KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA YP_003102587.1 PFAM: aldo/keto reductase; KEGG: hypothetical protein YP_003102588.1 PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_3134 major facilitator superfamily MFS_1 YP_003102590.1 PFAM: thiazole biosynthesis family protein; KEGG: esa:ESA_03683 thiazole synthase YP_003102591.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_003102592.1 PFAM: cobalamin B12-binding domain protein; KEGG: rpc:RPC_1467 cobalamin B12-binding YP_003102593.1 PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: sus:Acid_6601 serine phosphatase YP_003102594.1 KEGG: rsq:Rsph17025_3833 hypothetical protein YP_003102595.1 KEGG: nar:Saro_3082 protein tyrosine/serine phosphatase YP_003102596.1 KEGG: mxa:MXAN_6381 hypothetical protein YP_003102597.1 KEGG: nar:Saro_1805 hypothetical protein YP_003102598.1 KEGG: bxe:Bxe_B2117 CdaR family transcriptional regulator YP_003102599.1 PFAM: extracellular solute-binding protein family 5; KEGG: eca:ECA1549 ABC transporter substrate-binding protein YP_003102600.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_2742 binding-protein-dependent transport systems inner membrane component YP_003102601.1 PFAM: major facilitator superfamily MFS_1; KEGG: ent:Ent638_3208 major facilitator transporter YP_003102602.1 SMART: helix-turn-helix domain protein; KEGG: bvi:Bcep1808_6371 transcriptional regulator YP_003102603.1 PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: pde:Pden_4560 sodium/sulphate symporter YP_003102604.1 KEGG: pde:Pden_4561 glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003102605.1 KEGG: scl:sce2447 transcriptional regulator YP_003102606.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase YP_003102607.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: two component heavy metal response transcriptional regulator, winged helix family YP_003102608.1 PFAM: lytic transglycosylase catalytic; KEGG: bsu:BSU26030 hypothetical protein YP_003102609.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: rpe:RPE_0181 Na+/H+ antiporter YP_003102610.1 PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_1465 major facilitator transporter YP_003102611.1 PFAM: alpha/beta hydrolase fold; KEGG: bvi:Bcep1808_3804 alpha/beta hydrolase fold YP_003102612.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ade:Adeh_2212 LysR family transcriptional regulator YP_003102614.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: short-chain dehydrogenase/reductase (SDR) family protein YP_003102615.1 PFAM: survival protein SurE; KEGG: rce:RC1_0808 5'/3'-nucleotidase SurE YP_003102616.1 PFAM: PfkB domain protein; KEGG: bha:BH0827 fructose 1-phosphate kinase YP_003102617.1 KEGG: scl:sce9313 hypothetical protein YP_003102618.1 KEGG: hypothetical protein YP_003102619.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: hypothetical protein YP_003102620.1 KEGG: bid:Bind_2275 membrane protein-like protein YP_003102621.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3434 glycosyl transferase family protein YP_003102622.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ank:AnaeK_2943 CDP-alcohol phosphatidyltransferase YP_003102623.1 KEGG: dsh:Dshi_1005 ribonuclease BN YP_003102624.1 KEGG: mxa:MXAN_1566 hypothetical protein YP_003102625.1 PFAM: peptidase M28; peptidase M20; KEGG: pap:PSPA7_2223 aminopeptidase YP_003102626.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: psb:Psyr_1799 hypothetical protein YP_003102627.1 PFAM: regulatory protein TetR; KEGG: bxe:Bxe_B3018 TetR family transcriptional regulator YP_003102628.1 PFAM: glycosyl transferase family 2; KEGG: aba:Acid345_0505 glycosyl transferase, family 2 YP_003102629.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1425 glycosyl transferase group 1 YP_003102630.1 PFAM: glycosyl transferase group 1; KEGG: ade:Adeh_3504 phosphatidylinositol alpha- mannosyltransferase YP_003102631.1 KEGG: tgr:Tgr7_3096 glycosyl transferase family 39 YP_003102632.1 PFAM: acyltransferase 3; KEGG: cak:Caul_2329 acyltransferase 3 YP_003102633.1 KEGG: dal:Dalk_1860 hypothetical protein YP_003102634.1 PFAM: regulatory protein TetR; KEGG: rme:Rmet_4903 transcriptional regulator, TetR family YP_003102635.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: rfr:Rfer_1113 glycoside hydrolase family protein YP_003102636.1 PFAM: pectinesterase; Ricin B lectin; pectate lyase/Amb allergen; SMART: Ricin B lectin; Parallel beta-helix repeat; pectate lyase/Amb allergen; KEGG: bha:BH0698 pectate lyase YP_003102637.1 KEGG: pip; proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold YP_003102638.1 KEGG: hypothetical protein; PFAM: glycoside hydrolase family 62; Ricin B lectin; SMART: Ricin B lectin YP_003102641.1 KEGG: acr:Acry_0972 methionyl-tRNA synthetase YP_003102642.1 PFAM: methyltransferase type 12; methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S-methyltransferase; KEGG: scl:sce2146 methyltransferase YP_003102643.1 PFAM: monooxygenase FAD-binding; KEGG: bur:Bcep18194_A4891 monooxygenase, FAD- binding YP_003102644.1 KEGG: MYH3; myosin, heavy chain 3, skeletal muscle, embryonic; K10352 myosin heavy chain YP_003102645.1 PFAM: MMPL domain protein; KEGG: bcz:BCZK2163 MmpL family integral membrane protein YP_003102646.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: cak:Caul_0809 MarR family transcriptional regulator YP_003102647.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: protein of unknown function DUF1205; KEGG: bsu:BSU12220 hypothetical protein YP_003102648.1 TIGRFAM: glycosyltransferase, MGT family; PFAM: protein of unknown function DUF1205; glycosyl transferase family 28; KEGG: ecf:ECH74115_1369 glycosyl transferase YP_003102649.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: scl:sce2495 hemolysin YP_003102651.1 KEGG: GA24328 gene product from transcript GA24328- RA YP_003102652.1 KEGG: hne:HNE_2114 hypothetical protein YP_003102654.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003102655.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003102656.1 PFAM: protein of unknown function DUF397 YP_003102657.1 SMART: helix-turn-helix domain protein YP_003102658.1 KEGG: bra:BRADO4970 hypothetical protein YP_003102660.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: nmc:NMC1726 hypothetical protein YP_003102661.1 KEGG: hypothetical protein YP_003102662.1 PFAM: hypothetical protein; KEGG: mch:Mchl_4966 hypothetical protein YP_003102664.1 KEGG: esa:ESA_01086 hypothetical protein YP_003102665.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003102666.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: mch:Mchl_4713 histidine kinase YP_003102667.1 KEGG: bte:BTH_II2362 esterase EstC YP_003102668.1 KEGG: HDA1511; class II RPD3 type histone deacetylase protein; K11407 histone deacetylase 6/10 YP_003102669.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pla:Plav_1643 GCN5-related N- acetyltransferase YP_003102670.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: bpt:Bpet3509 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_003102671.1 PFAM: transketolase; transketolase; KEGG: nha:Nham_3108 transketolase, central region YP_003102672.1 KEGG: ank:AnaeK_1422 pyruvate dehydrogenase (acetyl- transferring); TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003102673.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: har:HEAR0121 leucine-responsive regulatory protein YP_003102674.1 PFAM: SCP-like extracellular; KEGG: SCP-like extracellular YP_003102675.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ent:Ent638_4061 two-component sensor protein YP_003102676.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pap:PSPA7_3717 KDP operon transcriptional regulatory protein KdpE YP_003102677.1 KEGG: similar to Ras GTPase-activating protein- binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2) YP_003102678.1 KEGG: cti:RALTA_A3069 membrane bound protein, weak cytochrome C domains YP_003102679.1 PFAM: aminoglycoside phosphotransferase; KEGG: bxe:Bxe_A3516 transposase YP_003102681.1 KEGG: mrd:Mrad2831_4352 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003102682.1 PFAM: cyclase family protein; KEGG: hch:HCH_01555 metal-dependent hydrolase YP_003102683.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: smd:Smed_2747 alcohol dehydrogenase GroES domain protein YP_003102684.1 PFAM: thioesterase superfamily protein; KEGG: bmj:BMULJ_01339 thioesterase YP_003102685.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: mxa:MXAN_6248 cyclic nucleotide-binding domain protein YP_003102686.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: scl:sce1442 nucleotide-binding protein YP_003102687.1 PFAM: polyprenyl synthetase; KEGG: sfu:Sfum_1417 polyprenyl synthetase YP_003102688.1 KEGG: acr:Acry_1832 hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003102689.1 PFAM: transketolase; transketolase; KEGG: mgm:Mmc1_1048 1-deoxy-D-xylulose-5-phosphate synthase YP_003102690.1 KEGG: rsr-1; SR protein related YP_003102691.1 PFAM: protein of unknown function DUF742 YP_003102693.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpe:RPE_0795 RNA polymerase sigma factor RpoE YP_003102694.1 PFAM: glycosyl transferase family 2; KEGG: sfu:Sfum_0186 glycosyl transferase, family 2 YP_003102695.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RSc0632 NADP-dependent alcohol dehydrogenase oxidoreductase protein YP_003102696.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003102697.1 PFAM: protein of unknown function DUF1232; KEGG: mca:MCA0116 hypothetical protein YP_003102698.1 PFAM: conserved hypothetical protein; KEGG: afw:Anae109_3197 hypothetical protein YP_003102700.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dar:Daro_0405 phospholipid/glycerol acyltransferase YP_003102701.1 PFAM: Stage II sporulation E family protein; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; KEGG: mag:amb3537 serine phosphatase RsbU, regulator of sigma subunit YP_003102702.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: dal:Dalk_3400 histidine kinase YP_003102703.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mag:amb2979 FOG: CheY-like receiver YP_003102704.1 KEGG: ade:Adeh_3125 alpha/beta hydrolase fold-1 YP_003102705.1 PFAM: protein of unknown function DUF397 YP_003102706.1 SMART: helix-turn-helix domain protein YP_003102709.1 KEGG: hypothetical protein YP_003102711.1 KEGG: aeh:Mlg_1110 hypothetical protein YP_003102712.1 KEGG: afw:Anae109_1986 extracellular HAF YP_003102714.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003102715.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_1825 short-chain dehydrogenase/reductase SDR YP_003102716.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bur:Bcep18194_B1012 short-chain dehydrogenase/reductase SDR YP_003102717.1 PFAM: amidohydrolase; hypothetical protein; KEGG: ade:Adeh_2230 hypothetical protein YP_003102719.1 PFAM: transposase IS4 family protein; KEGG: mno:Mnod_8094 transposase IS4 family protein YP_003102720.1 KEGG: bcz:BCZK2539 UvrD/Rep helicase family protein YP_003102721.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: spe:Spro_3426 ABC transporter-related protein YP_003102722.1 PFAM: transport system permease protein; KEGG: ppg:PputGB1_1806 transport system permease protein YP_003102723.1 PFAM: transport system permease protein; KEGG: atc:AGR_pAT_449 ferric enterobactin transport protein FepD YP_003102724.1 PFAM: PfkB domain protein; KEGG: bha:BH3724 2-keto-3-deoxygluconate kinase YP_003102725.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: gdi:GDI1202 L-idonate 5-dehydrogenase YP_003102726.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0919 transport protein YP_003102727.1 PFAM: mannitol dehydrogenase domain; mannitol dehydrogenase rossman domain; KEGG: mmr:Mmar10_0223 mannitol dehydrogenase YP_003102728.1 PFAM: mandelate racemase/muconate lactonizing protein; KEGG: eca:ECA0917 starvation sensing mandelate racemase / muconate lactonizing enzyme YP_003102729.1 PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: sme:SMa0065 GntR family transcriptional regulator YP_003102731.1 PFAM: MbtH domain protein; KEGG: bbt:BBta_4111 hypothetical protein YP_003102732.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; condensation domain protein; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase YP_003102733.1 PFAM: periplasmic binding protein; KEGG: atc:AGR_pAT_447 DtxR/iron regulated lipoprotein precursor YP_003102734.1 KEGG: dac:Daci_4749 L-lysine 6-monooxygenase (NADPH) YP_003102735.1 PFAM: ABC transporter; ABC transporter transmembrane protein; KEGG: met:M446_4330 lipid ABC transporter ATPase/inner membrane protein YP_003102736.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: afw:Anae109_3226 ABC transporter YP_003102737.1 PFAM: beta-lactamase domain protein; KEGG: beta-lactamase domain protein YP_003102738.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: similar to PGRP-SC1a protein YP_003102739.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_6060 amine oxidase, flavin- containing YP_003102740.1 KEGG: endo-1,4-beta-xylanase; K01181 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; cellulose- binding family II; SMART: glycoside hydrolase family 10; cellulose- binding family II YP_003102742.1 PFAM: glycoside hydrolase family 16; KEGG: glycoside hydrolase YP_003102743.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport YP_003102745.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: smt:Smal_1176 lysine exporter protein (LysE/YggA) YP_003102746.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ade:Adeh_1010 bifunctional deaminase- reductase-like YP_003102747.1 KEGG: bcm:Bcenmc03_6355 outer membrane autotransporter YP_003102748.1 KEGG: bac:BamMC406_5247 IclR family transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR YP_003102749.1 PFAM: carboxymuconolactone decarboxylase; KEGG: mlo:mlr7207 gamma carboxymuconolactone decarboxylase YP_003102751.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: swi:Swit_0978 3-oxoadipate enol-lactonase YP_003102752.1 KEGG: reh:H16_B2290 protocatechuate 3,4-dioxygenase alpha chain; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003102753.1 KEGG: pfo:Pfl01_1270 protocatechuate 3,4- dioxygenase, beta subunit; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003102754.1 PFAM: coenzyme A transferase; KEGG: xcv:XCV0379 glutaconate CoA transferase subunit B YP_003102755.1 PFAM: coenzyme A transferase; KEGG: pag:PLES_02231 CoA transferase, subunit A YP_003102756.1 KEGG: noc:Noc_2708 hypothetical protein YP_003102757.1 SMART: ATPase AAA; KEGG: met:M446_5114 ATPase AAA YP_003102758.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: gsu:GSU0700 sensory box/response regulator YP_003102759.1 KEGG: ank:AnaeK_4253 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; GAF domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; GAF domain protein; histidine kinase HAMP region domain protein YP_003102760.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mca:MCA1686 anti-sigma B factor antagonist YP_003102761.1 PFAM: ATP-binding region ATPase domain protein; KEGG: met:M446_2753 signal transduction histidine kinase YP_003102762.1 PFAM: Ppx/GppA phosphatase; KEGG: acp:A2cp1_0693 Ppx/GppA phosphatase YP_003102763.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sus:Acid_2843 anti-sigma-factor antagonist YP_003102765.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c2921 acetyltransferase, GNAT family YP_003102766.1 PFAM: luciferase-like monooxygenase; KEGG: mpo:Mpop_1275 dehydrogenase protein YP_003102768.1 KEGG: TIMP2; TIMP metallopeptidase inhibitor 2 YP_003102770.1 KEGG: vei:Veis_1391 periplasmic binding protein/LacI transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003102771.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: peptidase U61, LD-carboxypeptidase A YP_003102772.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pag:PLES_17341 short chain dehydrogenase YP_003102773.1 PFAM: regulatory protein TetR; KEGG: met:M446_2111 TetR family transcriptional regulator YP_003102775.1 PFAM: chitin-binding domain 3 protein; KEGG: hch:HCH_03973 N-acetylglucosamine-binding protein A YP_003102777.1 KEGG: GK22681 gene product from transcript GK22681- RA YP_003102778.1 PFAM: CsbD family protein; KEGG: pen:PSEEN4005 hypothetical protein YP_003102779.1 PFAM: ANTAR domain protein YP_003102780.1 KEGG: gsu:GSU2358 isoamylase family protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003102781.1 KEGG: reu:Reut_B4234 alpha amylase domain- containing protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003102782.1 KEGG: nmu:Nmul_A1401 glycogen debranching protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003102784.1 KEGG: bpt:Bpet2366 hypothetical protein; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_003102785.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: sme:SM_b20014 transcriptional regulator protein YP_003102786.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: afw:Anae109_2778 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_003102787.1 PFAM: luciferase-like monooxygenase; KEGG: pzu:PHZ_c2545 5,10- methylenetetrahydromethanopterin reductase YP_003102788.1 PFAM: peptidase M23; KEGG: pde:Pden_4473 peptidase M23B YP_003102789.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rce:RC1_2700 penicillin-binding protein, 1A family YP_003102790.1 PFAM: PfkB domain protein; KEGG: sme:SM_b21462 sugar kinase protein YP_003102791.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pla:Plav_0951 ECF subfamily RNA polymerase sigma-24 factor YP_003102792.1 PFAM: alpha/beta hydrolase fold; KEGG: mrd:Mrad2831_0619 alpha/beta hydrolase fold YP_003102793.1 KEGG: pap:PSPA7_5262 hypothetical protein YP_003102794.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: ade:Adeh_2212 LysR family transcriptional regulator YP_003102795.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mlo:mll2997 short chain dehydrogenase YP_003102796.1 PFAM: regulatory protein DeoR; regulatory protein GntR HTH; SMART: regulatory protein DeoR; KEGG: aba:Acid345_0659 transcriptional regulator, DeoR family YP_003102797.1 KEGG: bha:BH0227 hypothetical protein YP_003102798.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter YP_003102799.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dal:Dalk_3354 enoyl-CoA hydratase/isomerase YP_003102801.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6041 ABC transporter, ATP-binding protein YP_003102802.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003102803.1 KEGG: scl:sce9133 secreted protein YP_003102804.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: xau:Xaut_1595 ECF subfamily RNA polymerase sigma-24 factor YP_003102805.1 KEGG: similar to mucin 2; K10955 intestinal mucin- 2 YP_003102806.1 KEGG: bur:Bcep18194_A4859 hypothetical protein YP_003102808.1 PFAM: proprotein convertase P; KEGG: aba:Acid345_4222 hypothetical protein YP_003102809.1 KEGG: aba:Acid345_0225 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003102810.1 PFAM: MASE1 domain protein; KEGG: sse:Ssed_3344 signal transduction protein YP_003102811.1 TIGRFAM: lycopene cyclase family protein; PFAM: Lycopene beta and epsilon cyclase; KEGG: hypothetical protein; K06443 lycopene beta cyclase YP_003102812.1 KEGG: cti:RALTA_B1157 diguanylate cyclase (GGDEF domain) and C-di-GMP phosphodiesterase (EAL domain)); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003102813.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: jan:Jann_1911 carboxylate-amine ligase YP_003102814.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: bph:Bphy_4760 CBS domain-containing protein YP_003102815.1 PFAM: protein of unknown function DUF59; KEGG: eli:ELI_12745 metal-sulfur cluster biosynthetic enzyme YP_003102816.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: bsu:BSU32680 hypothetical protein YP_003102817.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: acr:Acry_2269 SufS subfamily cysteine desulfurase YP_003102818.1 KEGG: bat:BAS4851 ABC transporter, ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA YP_003102819.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmn:BMA10247_A0236 aromatic-ring- hydroxylating dioxygenase, ferredoxin subunit YP_003102820.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: mxa:MXAN_1155 FeS assembly protein SufD YP_003102821.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: bcz:BCZK4703 iron-regulated ABC transporter YP_003102822.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: ypk:y4095 hypothetical protein YP_003102823.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_0865 oxidoreductase, short chain dehydrogenase/reductase family YP_003102824.1 PFAM: regulatory protein TetR; KEGG: msl:Msil_3313 transcriptional regulator, TetR family YP_003102825.1 KEGG: met:M446_4899 hypothetical protein YP_003102826.1 PFAM: Patatin; KEGG: bpm:BURPS1710b_1675 patatin family phospholipase YP_003102827.1 PFAM: glycosyl transferase group 1; KEGG: lpc:LPC_1061 glycosyltransferase YP_003102828.1 KEGG: dvm:DvMF_2468 molybdopterin-containing oxidoreductase membrane anchor subunit YP_003102829.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mxa:MXAN_1597 ABC transporter, ATP-binding protein YP_003102830.1 PFAM: ABC transporter; KEGG: scl:sce5572 integral membrane transport protein YP_003102831.1 KEGG: Sfrs15; splicing factor, arginine/serine-rich 15 YP_003102833.1 KEGG: pfo:Pfl01_4833 chemotaxis sensory transducer YP_003102835.1 PFAM: cytochrome oxidase assembly; KEGG: noc:Noc_3040 cytochrome oxidase assembly YP_003102836.1 SMART: regulatory protein ArsR; KEGG: scl:sce6114 hypothetical protein YP_003102837.1 PFAM: protein of unknown function DUF742; KEGG: Hypothetical protein CBG22207 YP_003102838.1 PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_0367 roadblock/LC7 family protein YP_003102839.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20 YP_003102840.1 PFAM: protein of unknown function DUF485; KEGG: sus:Acid_0924 hypothetical protein YP_003102841.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: dvm:DvMF_0315 SSS sodium solute transporter superfamily YP_003102842.1 KEGG: tmz:Tmz1t_1794 hypothetical protein YP_003102844.1 PFAM: protein of unknown function DUF885; KEGG: mxa:MXAN_0186 lipoprotein YP_003102845.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bte:BTH_II0233 quinone oxidoreductase YP_003102846.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: scl:sce3796 FKBP-type peptidyl-prolyl cis- trans isomerase YP_003102849.1 KEGG: bsu:BSU21890 hypothetical protein YP_003102850.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mno:Mnod_5360 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003102851.1 KEGG: eca:ECA0122 hypothetical protein YP_003102852.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: rce:RC1_3632 protoheme IX farnesyltransferase YP_003102853.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_003102854.1 TIGRFAM: transaldolase; PFAM: transaldolase; KEGG: aba:Acid345_2810 bifunctional transaldolase/phosoglucose isomerase YP_003102855.1 PFAM: phosphoglucose isomerase (PGI); KEGG: mno:Mnod_7445 transaldolase YP_003102856.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_003102857.1 TIGRFAM: OpcA protein; KEGG: sus:Acid_5280 glucose-6-P dehydrogenase subunit-like protein YP_003102858.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: gdi:GDI0291 6-phosphogluconolactonase YP_003102859.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003102860.1 KEGG: GI19648 gene product from transcript GI19648- RA YP_003102861.1 KEGG: YALI0C10450p YP_003102863.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pne:Pnec_0820 preprotein translocase, SecG subunit YP_003102864.1 KEGG: bsu:BSU33920 triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase YP_003102865.1 PFAM: phosphoglycerate kinase; KEGG: bsu:BSU33930 phosphoglycerate kinase YP_003102866.1 KEGG: bha:BH3560 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003102867.1 KEGG: PHC10; cell wall protein pherophorin-C10 YP_003102869.1 KEGG: scl:sce6476 hypothetical protein YP_003102870.1 PFAM: protein of unknown function DUF199; KEGG: bsu:BSU34750 hypothetical protein YP_003102871.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: afw:Anae109_2613 protein of unknown function UPF0052 and CofD YP_003102872.1 PFAM: conserved hypothetical protein; KEGG: afw:Anae109_0152 hypothetical protein YP_003102873.1 KEGG: tgr:Tgr7_1907 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; helix-hairpin- helix motif; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003102874.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1329 dioxygenase, ferredoxin reductase component YP_003102875.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: xcv:XCV3420 Rieske 2Fe-2S family protein YP_003102878.1 KEGG: bxe:Bxe_C1257 hypothetical protein YP_003102879.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: scl:sce5223 DeoR family transcriptional regulator YP_003102881.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor YP_003102882.1 PFAM: peptidase M28; peptidase M20; KEGG: bcy:Bcer98_3876 peptidase M28 YP_003102884.1 KEGG: dds:Ddes_1621 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003102885.1 KEGG: ATGCH; ATGCH (ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II); 3,4-dihydroxy-2-butanone-4-phosphate synthase/ GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_003102886.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: hap:HAPS_1135 riboflavin synthase subunit alpha YP_003102887.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate YP_003102888.1 KEGG: acp:A2cp1_3940 hypothetical protein YP_003102889.1 PFAM: flavoprotein; KEGG: xau:Xaut_0078 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_003102890.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: ade:Adeh_3970 NusB/RsmB/TIM44 family protein YP_003102891.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mca:MCA2844 methionyl-tRNA formyltransferase YP_003102892.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_003102895.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pla:Plav_1868 RNA polymerase sigma factor RpoE YP_003102897.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: pzu:PHZ_c1529 RNA polymerase sigma-70 factor,ECF subfamily YP_003102899.1 KEGG: scl:sce1211 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003102900.1 KEGG: hypothetical protein YP_003102901.1 KEGG: bav:BAV3210 primosomal protein N' YP_003102902.1 KEGG: bha:BH3300 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003102903.1 KEGG: acp:A2cp1_1587 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003102904.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: rma:Rmag_0405 DNA-directed RNA polymerase, omega subunit YP_003102905.1 KEGG: bcy:Bcer98_2523 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003102907.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: mxa:MXAN_5910 orotidine 5'-phosphate decarboxylase YP_003102908.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: carbamoyl-phosphate synthase L chain ATP- binding; RimK domain protein ATP-grasp; MGS domain protein; ATP-grasp domain protein; carbamoyl-phosphate synthetase large chain oligomerisation; carbamoyl- phosphate synthetase large chain domain protein; KEGG: gur:Gura_1864 carbamoyl-phosphate synthase, large subunit YP_003102909.1 KEGG: smt:Smal_1811 carbamoyl-phosphate synthase, small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003102911.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_003102912.1 TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; KEGG: scl:sce3822 hypothetical protein YP_003102913.1 PFAM: phosphoribosyltransferase; KEGG: gsu:GSU1270 pyrimidine regulatory protein pyrR YP_003102914.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pzu:PHZ_c2067 transcriptional regulator, Cro/CI family YP_003102915.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mxa:MXAN_4761 transcription antitermination factor NusB YP_003102916.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor KOW domain protein; Elongation factor P; Elongation factor P/YeiP protein; KEGG: bha:BH2799 elongation factor P YP_003102917.1 PFAM: peptidase M24; creatinase; KEGG: sus:Acid_7433 peptidase M24 YP_003102918.1 KEGG: mrd:Mrad2831_3019 hypothetical protein YP_003102919.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_003102920.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis YP_003102921.1 PFAM: shikimate kinase; KEGG: pen:PSEEN0334 shikimate kinase YP_003102922.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_003102923.1 PFAM: peptidase A24A prepilin type IV; KEGG: hha:Hhal_2022 prepilin peptidase YP_003102924.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bsu:BSU39270 phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component YP_003102925.1 PFAM: phosphotransferase system PTS EIIB protein; KEGG: esa:ESA_00528 hypothetical protein YP_003102926.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bha:BH0419 GntR family transcriptional regulator YP_003102927.1 PFAM: phosphotransferase system EIIC; KEGG: bha:BH0422 PTS system, N-acetylglucosamine- specific enzyme II, ABC component YP_003102928.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: aeh:Mlg_2234 HPr family phosphocarrier protein YP_003102929.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate YP_003102930.1 PFAM: aminodeoxychorismate lyase; KEGG: gme:Gmet_3021 aminodeoxychorismate lyase YP_003102931.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: bha:BH1269 hypothetical protein YP_003102932.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_003102936.1 PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: jan:Jann_0385 cupin 4 YP_003102937.1 PFAM: sucraseferredoxin; KEGG: hch:HCH_03459 hypothetical protein YP_003102938.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: sfu:Sfum_2834 methyltransferase type 12 YP_003102939.1 PFAM: ATPase AAA; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: gsu:GSU2067 recombination factor protein RarA YP_003102940.1 KEGG: hypothetical protein; K00876 uridine kinase YP_003102941.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: scl:sce4364 ATP-dependent helicase YP_003102942.1 PFAM: transcriptional activator domain; TPR repeat- containing protein; NB-ARC domain protein; transcriptional regulator domain protein; SMART: ATPase AAA; hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003102943.1 PFAM: transglycosylase domain protein; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: ade:Adeh_2701 peptidoglycan-binding LysM YP_003102945.1 PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: rpi:Rpic_1227 two component transcriptional regulator, LytTR family YP_003102946.1 PFAM: protein of unknown function DUF485 YP_003102947.1 PFAM: Na+/solute symporter; KEGG: ade:Adeh_3696 SSS family solute/sodium (Na+) symporter YP_003102948.1 PFAM: histidine kinase internal region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: gme:Gmet_2698 histidine kinase internal region YP_003102949.1 KEGG: rle:RL1216 hypothetical protein YP_003102950.1 PFAM: regulatory protein TetR; KEGG: rlt:Rleg2_5162 transcriptional regulator, TetR family YP_003102951.1 KEGG: bvi:Bcep1808_7569 transposase and inactivated derivatives-like protein YP_003102952.1 PFAM: metallophosphoesterase; KEGG: scl:sce5059 metallophosphoesterase YP_003102953.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: gdi:GDI2832 phosphopantetheinyl transferase PptA YP_003102954.1 KEGG: swd:Swoo_0692 CBS domain-containing protein YP_003102955.1 PFAM: hypothetical protein; KEGG: ecw:EcE24377A_3363 hypothetical protein YP_003102956.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: spe:Spro_3591 enoyl-CoA hydratase/isomerase YP_003102957.1 PFAM: helix-turn-helix HxlR type; KEGG: transcriptional regulator protein YP_003102960.1 KEGG: xcv:XCV1426 hypothetical protein YP_003102961.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate YP_003102962.1 PFAM: regulatory protein TetR; KEGG: mno:Mnod_1181 transcriptional regulator, TetR family YP_003102963.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: rlt:Rleg2_1533 methyltransferase type 12 YP_003102964.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: bxe:Bxe_C1266 alcohol dehydrogenase YP_003102965.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mmw:Mmwyl1_2496 helix-turn-helix domain- containing protein YP_003102968.1 KEGG: rpc:RPC_1516 hypothetical protein YP_003102969.1 KEGG: Trpm4; transient receptor potential cation channel, subfamily M, member 4; K04979 transient receptor potential cation channel, subfamily M, member 4 YP_003102970.1 KEGG: xca:xccb100_0630 oxidoreductase YP_003102971.1 SMART: ATPase AAA; KEGG: bbr:BB2829 hypothetical protein YP_003102972.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: predicted protein YP_003102973.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce9297 zinc-binding dehydrogenase YP_003102974.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gdi:GDI2636 transporter protein YP_003102975.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bam:Bamb_2642 binding-protein-dependent transport systems inner membrane component YP_003102976.1 PFAM: extracellular solute-binding protein family 1; KEGG: bac:BamMC406_2511 extracellular solute- binding protein YP_003102977.1 PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; KEGG: cak:Caul_0312 DeoR family transcriptional regulator YP_003102978.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cvi:CV_1553 enoyl-CoA hydratase YP_003102980.1 PFAM: lanthionine synthetase C family protein; KEGG: mxa:MXAN_6388 lanthionine synthetase C family protein YP_003102981.1 KEGG: hypothetical protein YP_003102982.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: ade:Adeh_3289 SARP family transcriptional regulator YP_003102983.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_4291 MOSC domain-containing protein YP_003102984.1 PFAM: aldo/keto reductase; KEGG: aba:Acid345_2253 aldo/keto reductase YP_003102985.1 KEGG: rso:RS03172 signal peptide protein YP_003102986.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA YP_003102987.1 PFAM: glycoside hydrolase family 16; Ricin B lectin; SMART: Ricin B lectin; KEGG: cja:CJA_2759 beta glucanase, , glu16F YP_003102988.1 KEGG: hypothetical protein YP_003102989.1 PFAM: transcriptional activator domain; TPR repeat- containing protein; hypothetical protein; NB-ARC domain protein; transcriptional regulator domain protein; hypothetical protein; SMART: hypothetical protein; KEGG: scl:sce6858 hypothetical protein YP_003102990.1 PFAM: acyltransferase 3; KEGG: mes:Meso_0485 acyltransferase 3 YP_003102991.1 PFAM: protein of unknown function DUF75; KEGG: sfu:Sfum_3209 hypothetical protein YP_003102992.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: sat:SYN_01564 phospholipid-lipopolysaccharide ABC transporter YP_003102993.1 KEGG: mch:Mchl_4435 methyl-accepting chemotaxis sensory transducer YP_003102994.1 KEGG: bxe:Bxe_B2117 CdaR family transcriptional regulator YP_003102995.1 KEGG: aba:Acid345_2313 hypothetical protein YP_003102996.1 PFAM: regulatory protein TetR; KEGG: ade:Adeh_2298 TetR family transcriptional regulator YP_003102997.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: acp:A2cp1_1649 NAD-dependent epimerase/dehydratase YP_003102998.1 PFAM: pseudouridine synthase; KEGG: pmy:Pmen_1453 pseudouridine synthase YP_003102999.1 PFAM: protein of unknown function DUF305; KEGG: pag:PLES_26381 hypothetical protein YP_003103000.1 PFAM: chitin-binding domain 3 protein; carbohydrate- binding family V/XII; SMART: carbohydrate-binding family V/XII; KEGG: hypothetical protein YP_003103001.1 KEGG: glo:Glov_2382 alpha/beta hydrolase fold YP_003103002.1 PFAM: glycoside hydrolase family 19; KEGG: cja:CJA_0996 chitinase, , chi19A YP_003103003.1 KEGG: hha:Hhal_2194 alcohol dehydrogenase, zinc- binding domain protein YP_003103004.1 KEGG: mlo:mll2594 quinone oxidoreductase YP_003103005.1 PFAM: glycoside hydrolase family 9; cellulose- binding family II; glycoside hydrolase family 9 domain protein Ig domain protein; carbohydrate-binding CenC domain protein; SMART: cellulose-binding family II; KEGG: scl:sce2234 cellulase YP_003103006.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: psa:PST_1446 oxidoreductase, short-chain dehydrogenase/reductase family YP_003103007.1 KEGG: sus:Acid_4466 beta-lactamase YP_003103008.1 TIGRFAM: Dyp-type peroxidase family; KEGG: aba:Acid345_1379 hypothetical protein YP_003103009.1 KEGG: pzu:PHZ_c2158 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_003103010.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: pde:Pden_3115 protein of unknown function DUF21 YP_003103011.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: hps:HPSH_07635 hypothetical protein YP_003103013.1 SMART: von Willebrand factor type A; KEGG: hypothetical protein YP_003103015.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: mlo:mlr0745 transcriptional regulator YP_003103016.1 PFAM: major facilitator superfamily MFS_1; KEGG: sil:SPO1430 antibiotic efflux protein YP_003103017.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine YP_003103018.1 SMART: regulatory protein MerR; KEGG: afw:Anae109_4225 MerR family transcriptional regulator YP_003103019.1 PFAM: protein of unknown function DUF151; KEGG: dal:Dalk_2411 protein of unknown function DUF151 YP_003103020.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ade:Adeh_3310 zinc finger/thioredoxin YP_003103021.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: scl:sce2902 GGDEF domain-containing protein YP_003103022.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: ank:AnaeK_2621 glycine cleavage system H protein YP_003103023.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: tmz:Tmz1t_2031 CDP-diacylglycerol/glycerol-3- phosphate 3-phosphatidyltransferase YP_003103025.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mag:amb0333 anti-anti-sigma regulatory factor YP_003103026.1 PFAM: ATP-binding region ATPase domain protein; KEGG: dvm:DvMF_0253 signal transduction histidine kinase YP_003103027.1 KEGG: bsu:BSU04720 serine-protein kinase RsbW YP_003103028.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma- B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 4 domain protein; KEGG: bha:BH0529 RNA polymerase sigma factor SigB YP_003103029.1 PFAM: transcription factor WhiB YP_003103030.1 KEGG: mxa:MXAN_2497 hypothetical protein YP_003103031.1 PFAM: aldo/keto reductase; KEGG: mrd:Mrad2831_0318 aldo/keto reductase YP_003103032.1 KEGG: hypothetical protein YP_003103033.1 KEGG: afw:Anae109_0266 response regulator receiver YP_003103034.1 KEGG: ank:AnaeK_0242 Fe-S oxidoreductase YP_003103035.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpb:RPB_0486 RNA polymerase sigma factor RpoE YP_003103036.1 KEGG: hypothetical protein YP_003103037.1 PFAM: transcriptional regulator PadR family protein; KEGG: rpt:Rpal_2803 transcriptional regulator, PadR- like family YP_003103038.1 PFAM: Radical SAM domain protein; KEGG: sat:SYN_02268 radical SAM superfamily protein YP_003103039.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: oca:OCAR_4624 signal transduction histidine kinase containing PAS/PAC sensor domain YP_003103040.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bcr:BCAH187_A1601 DNA-binding response regulator YP_003103041.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bcy:Bcer98_1160 two component LuxR family transcriptional regulator YP_003103042.1 KEGG: mucin-associated surface protein (MASP) YP_003103043.1 PFAM: hypothetical protein; KEGG: hypothetical protein YP_003103044.1 KEGG: mrd:Mrad2831_3727 translation initiation factor IF-2 YP_003103045.1 TIGRFAM: phage tail protein; KEGG: gsu:GSU0989 NHL repeat-containing protein YP_003103046.1 KEGG: gsu:GSU0988 hypothetical protein YP_003103047.1 PFAM: GPW/gp25 family protein; KEGG: gsu:GSU0986 tail lysozyme YP_003103048.1 PFAM: hypothetical protein; KEGG: dar:Daro_3608 PaaR YP_003103049.1 TIGRFAM: Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: dsh:Dshi_2462 rhs element Vgr protein YP_003103050.1 PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: sde:Sde_1041 hypothetical protein YP_003103051.1 TIGRFAM: conserved hypothetical protein; KEGG: noc:Noc_1873 phage tail region protein YP_003103052.1 KEGG: NACA, TEBP; nascent polypeptide-associated complex alpha subunit YP_003103053.1 KEGG: mlo:msr6553 hypothetical protein YP_003103054.1 KEGG: gsu:GSU0977 hypothetical protein YP_003103055.1 TIGRFAM: conserved hypothetical protein; KEGG: gsu:GSU0976 hypothetical protein YP_003103056.1 PFAM: tail sheath protein; KEGG: mlo:mlr6548 hypothetical protein YP_003103057.1 KEGG: nha:Nham_0826 hypothetical protein YP_003103058.1 PFAM: ATPase AAA; SMART: ATPase AAA; KEGG: gsu:GSU0972 AAA family ATPase YP_003103059.1 KEGG: noc:Noc_1875 hypothetical protein YP_003103060.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003103061.1 PFAM: protein of unknown function DUF397 YP_003103062.1 KEGG: scl:sce3623 hypothetical protein YP_003103064.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma- B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 3 domain protein; KEGG: bha:BH0529 RNA polymerase sigma factor SigB YP_003103065.1 KEGG: mpt:Mpe_A0228 hypothetical protein YP_003103066.1 KEGG: mca:MCA0157 hypothetical protein YP_003103067.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: sus:Acid_3926 carboxylate-amine ligase YP_003103068.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: swi:Swit_1492 anti-sigma-factor antagonist YP_003103070.1 KEGG: rru:Rru_A3720 polysaccharide biosynthesis protein YP_003103071.1 PFAM: ThiJ/PfpI domain protein; KEGG: bca:BCE_3203 ThiJ/PfpI family protein YP_003103072.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce6302 AraC family transcriptional regulator YP_003103073.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_3338 serine/threonine protein kinase YP_003103074.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: smt:Smal_3461 CMP/dCMP deaminase zinc-binding YP_003103075.1 KEGG: ade:Adeh_3063 VCBS YP_003103076.1 PFAM: hypothetical protein; SMART: hypothetical protein; KEGG: sus:Acid_3454 tetratricopeptide TPR_4 YP_003103077.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: ade:Adeh_0234 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003103078.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: sus:Acid_3455 ECF subfamily RNA polymerase sigma-24 factor YP_003103080.1 KEGG: azo:azo0950 GGEF/EAL/PAS/PAC-domain- containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein YP_003103081.1 PFAM: protein of unknown function ATP binding; Miro domain protein; KEGG: dac:Daci_0776 protein of unknown function ATP binding YP_003103082.1 PFAM: Roadblock/LC7 family protein; KEGG: pna:Pnap_2813 roadblock/LC7 family protein YP_003103083.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dvm:DvMF_1114 methyl-accepting chemotaxis sensory transducer YP_003103084.1 PFAM: NMT1/THI5 like domain protein; KEGG: bbt:BBta_5981 ABC transporter substrate- binding protein YP_003103085.1 catalyzes the formation of protocatechuate from 4-hydroxybenzoate YP_003103086.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ABC transporter YP_003103087.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter, permease protein YP_003103088.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_1369 ABC transporter membrane protein YP_003103090.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: sat:SYN_02856 RNA pseudouridylate synthase S4 domain-containing protein YP_003103091.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: sus:Acid_6490 condensin subunit ScpB YP_003103092.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: mxa:MXAN_3841 segregation and condensation protein A YP_003103093.1 KEGG: similar to Williams syndrome transcription factor YP_003103094.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bcb:BCB4264_A5607 sporulation initiation inhibitor protein Soj YP_003103095.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bca:BCE_2079 ArsR family transcriptional regulator YP_003103096.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: acp:A2cp1_2258 tyrosine recombinase XerD YP_003103097.1 PFAM: protein of unknown function DUF1707; TM2 domain containing protein?; KEGG: scl:sce7607 TM2 domain-containing protein YP_003103098.1 KEGG: pca:Pcar_0371 hypothetical protein YP_003103099.1 PFAM: NUDIX hydrolase; KEGG: dol:Dole_1905 NUDIX hydrolase YP_003103100.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_003103101.1 KEGG: acp:A2cp1_3214 PE-PGRS family protein YP_003103102.1 KEGG: bha:BH2771 hypothetical protein YP_003103104.1 TIGRFAM: DNA repair protein RecN; PFAM: hypothetical protein; KEGG: acp:A2cp1_0769 DNA repair protein RecN YP_003103105.1 PFAM: ATP-NAD/AcoX kinase; KEGG: ATP-NAD/AcoX kinase; K00858 NAD+ kinase YP_003103106.1 KEGG: acp:A2cp1_1226 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_003103108.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bat:BAS4827 phosphatase YP_003103109.1 KEGG: dvu:DVU0907 hypothetical protein YP_003103110.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr) YP_003103112.1 PFAM: calcium-binding EF-hand-containing protein; SMART: calcium-binding EF-hand-containing protein; KEGG: Scp2; Sarcoplasmic calcium-binding protein 2 YP_003103113.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: bmu:Bmul_0540 3-methyladenine DNA glycosylase YP_003103114.1 catalyzes the formation of arginine from (N-L-arginino)succinate YP_003103115.1 PFAM: argininosuccinate synthase; KEGG: bha:BH3187 argininosuccinate synthase YP_003103116.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: afw:Anae109_0631 arginine repressor, ArgR YP_003103117.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: afr:AFE_0405 ornithine carbamoyltransferase YP_003103118.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine YP_003103119.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate YP_003103120.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate YP_003103121.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate YP_003103122.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: scl:sce1535 alcohol dehydrogenase YP_003103123.1 PFAM: transposase IS4 family protein; KEGG: sbc:SbBS512_A0291 transposase (IS4 family) YP_003103124.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mmr:Mmar10_0512 XRE family transcriptional regulator YP_003103125.1 KEGG: cak:Caul_3518 hypothetical protein YP_003103126.1 catalyzes the conversion of NADPH to NADH YP_003103128.1 KEGG: pca:Pcar_1423 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003103129.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: cja:CJA_2526 phenylalanyl-tRNA synthetase, alpha subunit YP_003103130.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mxa:MXAN_1393 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein YP_003103131.1 PFAM: hypothetical protein; hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: mxa:MXAN_1392 hypothetical protein YP_003103132.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sus:Acid_5477 two component transcriptional regulator YP_003103133.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: psa:PST_4043 sensor histidine kinase TctE YP_003103134.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: ret:RHE_CH00393 rRNA methylase YP_003103135.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: pfo:Pfl01_1934 50S ribosomal protein L20 YP_003103136.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: aba:Acid345_0714 LSU ribosomal protein L35P YP_003103137.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: ftm:FTM_1017 translation initiation factor IF- 3 YP_003103140.1 PFAM: helix-turn-helix domain protein; NB-ARC domain protein; SMART: helix-turn-helix domain protein; ATPase AAA; KEGG: scl:sce5225 protein kinase YP_003103141.1 TIGRFAM: endoribonuclease L-PSP; PFAM: endoribonuclease L-PSP; KEGG: mmw:Mmwyl1_4387 endoribonuclease L- PSP YP_003103142.1 PFAM: transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bha:BH2137 IclR family transcriptional regulator YP_003103143.1 PFAM: PfkB domain protein; KEGG: bha:BH3724 2-keto-3-deoxygluconate kinase YP_003103144.1 PFAM: alanine racemase domain protein; KEGG: lch:Lcho_0086 D-serine deaminase YP_003103145.1 PFAM: Amidohydrolase 3; D-aminoacylase domain protein; amidohydrolase; KEGG: hypothetical protein YP_003103146.1 TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: oan:Oant_4271 gluconate transporter YP_003103147.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate YP_003103148.1 in Corynebacterium glutamicum this enzyme catalyzes the conversion of maleylpyruvate into fumarylpyruvate in a glutathione-independent gentisate pathway; dependent on mycothiol YP_003103149.1 PFAM: acyltransferase 3; KEGG: maq:Maqu_3475 acyltransferase 3 YP_003103150.1 PFAM: beta-lactamase domain protein; KEGG: gme:Gmet_2674 beta-lactamase-like YP_003103153.1 KEGG: hypothetical protein LOC762973 YP_003103154.1 PFAM: aminotransferase class I and II; KEGG: mxa:MXAN_0212 aminotransferase, class I and II family protein YP_003103155.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bpt:Bpet3500 ArsR family transcriptional regulator YP_003103156.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: ank:AnaeK_2658 activator of HSP90 ATPase 1 family protein YP_003103157.1 KEGG: hypothetical protein YP_003103158.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cti:RALTA_B0884 transcriptional regulator, AraC family, isolated domain YP_003103159.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cti:RALTA_B0885 lyase YP_003103160.1 PFAM: protein of unknown function DUF309; KEGG: dvm:DvMF_2231 protein of unknown function DUF309 YP_003103161.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pla:Plav_0958 GCN5-related N- acetyltransferase YP_003103164.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: acp:A2cp1_3940 hypothetical protein YP_003103165.1 PFAM: protein of unknown function DUF540; KEGG: maq:Maqu_3616 hypothetical protein YP_003103166.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: AGAP008296-PA YP_003103167.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: tbd:Tbd_2152 peptidyl-prolyl cis-trans isomerase YP_003103168.1 KEGG: hypothetical protein YP_003103169.1 KEGG: predicted gene, EG114600 YP_003103170.1 KEGG: hne:HNE_2077 hypothetical protein YP_003103171.1 KEGG: pla:Plav_3469 hypothetical protein YP_003103172.1 PFAM: hypothetical protein; KEGG: rsh:Rsph17029_3025 hypothetical protein YP_003103173.1 PFAM: GCN5-related N-acetyltransferase; KEGG: scl:sce8211 adenylattransferase YP_003103175.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: dal:Dalk_5197 transcriptional regulator, Crp/Fnr family YP_003103176.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; hypothetical protein; acetyl xylan esterase; KEGG: bsu:BSU32230 hypothetical protein YP_003103177.1 PFAM: integral membrane protein TerC; KEGG: csa:Csal_1104 integral membrane protein TerC YP_003103178.1 PFAM: ABC transporter; peptidase S15; alpha/beta hydrolase fold; SMART: ATPase AAA; KEGG: bcz:BCZK3372 bacitracin ABC transporter, ATP- binding protein YP_003103179.1 KEGG: rso:RSp1372 NosY transmembrane protein YP_003103180.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_003103181.1 KEGG: hypothetical protein YP_003103184.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; in Mycobacterium tuberculosis the C-terminal UPF0157 domain appears to be necessary for proper folding of the N-terminal domain YP_003103186.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_003103187.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: ank:AnaeK_1219 methyltransferase type 11 YP_003103188.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sil:SPO0965 acetyltransferase YP_003103189.1 KEGG: hypothetical protein YP_003103190.1 TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; PFAM: ABC transporter; KEGG: bce:BC5221 phage infection protein YP_003103191.1 PFAM: regulatory protein TetR; KEGG: scl:sce9124 TetR family transcriptional regulator YP_003103192.1 KEGG: bcz:BCZK1848 short chain dehydrogenase YP_003103193.1 KEGG: cvi:CV_0278 hypothetical protein YP_003103194.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: NAD binding Rossmann fold oxidoreductase; K00540 YP_003103195.1 KEGG: bur:Bcep18194_B0875 hypothetical protein YP_003103196.1 KEGG: afw:Anae109_2455 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; 3'-5' exonuclease; Helix-hairpin-helix domain protein class 2 YP_003103197.1 PFAM: thioesterase superfamily protein; KEGG: eum:ECUMN_0691 esterase YP_003103198.1 KEGG: bcr:BCAH187_A1173 hypothetical protein YP_003103199.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_1946 ABC transporter protein YP_003103200.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bmj:BMULJ_02460 branched-chain amino acid transport system ATP-binding protein YP_003103201.1 PFAM: inner-membrane translocator; KEGG: bbr:BB2027 ABC transport protein, ATP-binding component YP_003103202.1 PFAM: inner-membrane translocator; KEGG: cvi:CV_1503 leucine/isoleucine/valine transport system permease protein YP_003103203.1 PFAM: Extracellular ligand-binding receptor; KEGG: azo:azo3730 leucine-specific binding protein YP_003103204.1 PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: gme:Gmet_0660 response regulator receiver/ANTAR domain-containing protein YP_003103206.1 PFAM: protein of unknown function DUF664 YP_003103207.1 KEGG: hypothetical protein YP_003103208.1 PFAM: CoA-binding domain protein; KEGG: mag:amb2851 hypothetical protein YP_003103209.1 PFAM: endoribonuclease L-PSP; KEGG: nmu:Nmul_A2263 endoribonuclease L-PSP YP_003103210.1 PFAM: alpha/beta hydrolase fold; KEGG: xau:Xaut_2294 alpha/beta hydrolase fold YP_003103211.1 KEGG: disease resistance-responsive family protein / fibroin-related YP_003103212.1 PFAM: pentapeptide repeat protein; KEGG: bat:BAS3175 pentapeptide repeat-containing protein YP_003103213.1 KEGG: bpt:Bpet0900 DNA helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP- dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein YP_003103214.1 KEGG: bat:BAS3517 hypothetical protein YP_003103215.1 KEGG: hypothetical protein YP_003103217.1 KEGG: ade:Adeh_0244 LigA YP_003103219.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003103220.1 KEGG: cja:CJA_3805 helix-turn-helix domain protein YP_003103226.1 PFAM: HNH endonuclease; KEGG: sus:Acid_3418 HNH endonuclease YP_003103228.1 KEGG: similar to homologue to Drosophila photoreceptor protein calphotin YP_003103236.1 KEGG: ppg:PputGB1_3430 hypothetical protein YP_003103237.1 KEGG: aba:Acid345_1977 metallophosphoesterase YP_003103238.1 PFAM: C-5 cytosine-specific DNA methylase; KEGG: vei:Veis_3654 C-5 cytosine-specific DNA methylase YP_003103239.1 KEGG: mxa:MXAN_2991 adventurous gliding motility protein AglZ YP_003103241.1 PFAM: transcription factor WhiB YP_003103242.1 KEGG: hypothetical protein YP_003103247.1 KEGG: pzu:PHZ_c2649 5-methyltetrahydrofolate-- homocysteine methyltransferase YP_003103249.1 PFAM: hypothetical protein; KEGG: gme:Gmet_0890 smf protein YP_003103250.1 KEGG: dol:Dole_1907 phosphoribosyltransferase YP_003103252.1 KEGG: GK12364 gene product from transcript GK12364- RA YP_003103254.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: gbe:GbCGDNIH1_1245 predicted membrane-bound metal-dependent hydrolase YP_003103255.1 KEGG: fibrocystin-L-like protein YP_003103256.1 KEGG: ade:Adeh_4037 MaoC-like dehydratase YP_003103257.1 KEGG: PF6; flagellar central pair-associated protein YP_003103259.1 KEGG: pin:Ping_0445 colicin uptake-like protein YP_003103261.1 KEGG: scl:sce8592 hypothetical protein YP_003103262.1 PFAM: NUDIX hydrolase; KEGG: scl:sce2352 hypothetical protein YP_003103267.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sil:SPO0467 GntR family transcriptional regulator YP_003103273.1 PFAM: lipolytic protein G-D-S-L family; KEGG: met:M446_3487 triple helix repeat-containing COllagen YP_003103274.1 KEGG: bav:BAV1457 phage protein YP_003103277.1 KEGG: nwi:Nwi_1556 hypothetical protein YP_003103282.1 PFAM: terminase; KEGG: acp:A2cp1_1302 terminase YP_003103283.1 PFAM: protein of unknown function DUF1483 YP_003103285.1 KEGG: dal:Dalk_5199 hypothetical protein YP_003103287.1 KEGG: acr:Acry_2510 hypothetical protein YP_003103288.1 KEGG: bpa:BPP1618 autotransporter YP_003103297.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: mgm:Mmc1_2034 phage tail tape measure protein, TP901 family YP_003103298.1 KEGG: similar to endo-1,4-beta-glucanase YP_003103299.1 KEGG: mag:amb1782 PRY3 protein YP_003103302.1 KEGG: hypothetical protein YP_003103305.1 PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25; KEGG: sil:SPO3258 glycosy hydrolase family protein YP_003103307.1 KEGG: psb:Psyr_2800 hypothetical protein YP_003103308.1 PFAM: integrase family protein; KEGG: bce:BC1272 DNA integration/recombination/invertion protein YP_003103309.1 PFAM: protein of unknown function DUF156; KEGG: acp:A2cp1_3648 protein of unknown function DUF156 YP_003103311.1 TIGRFAM: para-aminobenzoate synthase, subunit I; glutamine amidotransferase of anthranilate synthase; PFAM: Chorismate binding-like; glutamine amidotransferase class-I; Anthranilate synthase component I domain protein; KEGG: rpd:RPD_2897 para-aminobenzoate synthase, component I YP_003103313.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor YP_003103314.1 PFAM: metallophosphoesterase; KEGG: scl:sce7577 integral membrane protein YP_003103315.1 PFAM: Orn/DAP/Arg decarboxylase 2; alanine racemase domain protein; KEGG: mag:amb1388 diaminopimelate decarboxylase YP_003103316.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: bcr:BCAH187_A5378 adenosylmethionine decarboxylase 2 YP_003103317.1 PFAM: spermine synthase; KEGG: jan:Jann_0855 spermidine synthase YP_003103318.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; KEGG: afw:Anae109_2431 peptidase S9B dipeptidylpeptidase IV subunit YP_003103319.1 PFAM: nitroreductase; KEGG: lch:Lcho_1290 nitroreductase YP_003103320.1 PFAM: glycine hydroxymethyltransferase; aminotransferase class I and II; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: rce:RC1_1342 serine hydroxymethyltransferase YP_003103321.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein YP_003103322.1 KEGG: bba:Bd3290 hypothetical protein YP_003103326.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rfr:Rfer_0993 L-carnitine dehydratase/bile acid-inducible protein F YP_003103327.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: rce:RC1_0378 acyl-CoA dehydrogenase YP_003103328.1 PFAM: GCN5-related N-acetyltransferase; KEGG: swp:swp_4165 GCN5-like N-acetyltransferase YP_003103329.1 TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: pag:PLES_35931 acyl-CoA thiolase YP_003103330.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: pmy:Pmen_2590 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase YP_003103331.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: pmy:Pmen_2972 AraC family transcriptional regulator YP_003103332.1 KEGG: hypothetical protein YP_003103333.1 PFAM: GCN5-related N-acetyltransferase; amino acid- binding ACT domain protein; KEGG: mch:Mchl_1293 GCN5-related N- acetyltransferase YP_003103334.1 KEGG: vvy:VVA0123 transcriptional regulator; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_003103335.1 PFAM: protein of unknown function DUF214; KEGG: aeh:Mlg_1312 hypothetical protein YP_003103336.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: aba:Acid345_0970 ABC transporter, ATPase subunit YP_003103337.1 PFAM: regulatory protein LuxR; hypothetical protein; SMART: regulatory protein LuxR; ATPase AAA; KEGG: rlt:Rleg2_5436 transcriptional regulator, LuxR family YP_003103338.1 PFAM: transcriptional activator domain; TPR repeat- containing protein; NB-ARC domain protein; transcriptional regulator domain protein; SMART: hypothetical protein; KEGG: scl:sce3550 hypothetical protein YP_003103339.1 PFAM: hypothetical protein; KEGG: ssn:SSON_2375 hypothetical protein YP_003103340.1 PFAM: protein of unknown function DUF397 YP_003103341.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003103343.1 PFAM: carbonic anhydrase; sulphate transporter; xanthine/uracil/vitamin C permease; KEGG: mxa:MXAN_4784 inorganic anion transporter, sulfate permease (SulP) family YP_003103344.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bsu:BSU23860 6-phosphogluconate dehydrogenase YP_003103345.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: hypothetical protein YP_003103346.1 PFAM: pyridoxal-dependent decarboxylase; KEGG: aba:Acid345_2160 aromatic-L-amino-acid decarboxylase YP_003103347.1 KEGG: met:M446_5500 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_003103348.1 KEGG: gur:Gura_4409 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: pyruvate kinase barrel; pyruvate kinase alpha/beta YP_003103349.1 PFAM: VanZ family protein; KEGG: jan:Jann_0771 VanZ like protein YP_003103350.1 KEGG: hch:HCH_00125 hypothetical protein YP_003103352.1 KEGG: xau:Xaut_0919 leucine-rich repeat-containing protein YP_003103353.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: sus:Acid_3815 glutamate synthase (NADH) small subunit YP_003103354.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: afw:Anae109_0854 glutamate synthase (ferredoxin) YP_003103355.1 PFAM: sodium:dicarboxylate symporter; KEGG: gur:Gura_0381 sodium:dicarboxylate symporter YP_003103356.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: sfu:Sfum_3723 TRAP transporter solute receptor, TAXI family YP_003103357.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATPase domain-containing protein YP_003103358.1 KEGG: scl:sce7916 hypothetical protein YP_003103359.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ade:Adeh_3856 two component transcriptional regulator YP_003103360.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: bha:BH3589 prolipoprotein diacylglyceryl transferase YP_003103361.1 KEGG: acp:A2cp1_4201 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_003103362.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_003103363.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water YP_003103364.1 KEGG: azo:azo0239 hypothetical protein YP_003103365.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine YP_003103366.1 PFAM: regulatory protein TetR; KEGG: mlo:mlr3851 TetR family transcriptional regulator YP_003103367.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mag:amb2307 phosphoribosyl-AMP cyclohydrolase YP_003103368.1 KEGG: pen:PSEEN4801 sensor histidine kinase YP_003103369.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: rce:RC1_3299 imidazoleglycerol phosphate synthase, cyclase subunit YP_003103370.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: pla:Plav_1338 death-on-curing family protein YP_003103372.1 PFAM: Clp domain protein; KEGG: Os12g0230100; hypothetical protein; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC YP_003103373.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide and the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)anthranilate; involved in histidine and tryptophan biosynthesis YP_003103374.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: xau:Xaut_2291 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003103376.1 PFAM: transketolase; transketolase; KEGG: rpe:RPE_1518 transketolase, central region YP_003103377.1 PFAM: transketolase; KEGG: bja:blr5426 transketolase YP_003103378.1 KEGG: aav:Aave_2276 transcriptional regulator, MerR family; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003103379.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: rle:RL2607 RNA 2'-phosphotransferase YP_003103381.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: acr:Acry_1413 imidazoleglycerol-phosphate dehydratase YP_003103382.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_003103383.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer YP_003103384.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bba:Bd3234 carboxypeptidase T precursor YP_003103385.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: scl:sce8911 class-V aminotransferase YP_003103386.1 PFAM: extracellular solute-binding protein family 5; KEGG: ses:SARI_01727 hypothetical protein YP_003103387.1 PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: eta:ETA_23610 hydrolase YP_003103388.1 PFAM: PRC-barrel domain protein; KEGG: atc:AGR_C_723 hypothetical protein YP_003103389.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide YP_003103390.1 KEGG: sus:Acid_7341 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_003103391.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate YP_003103392.1 PFAM: NUDIX hydrolase; KEGG: dal:Dalk_4948 NUDIX hydrolase YP_003103393.1 PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: pau:PA14_11940 hypothetical protein YP_003103394.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: cti:RALTA_B1248 muconolactone transporter; major facilitator superfamily MFS_1 YP_003103395.1 PFAM: protein of unknown function DUF1445; KEGG: pde:Pden_0321 hypothetical protein YP_003103396.1 KEGG: trans-sialidase YP_003103398.1 catalyzes the formation of biotin from dethiobiotin and sulfur 2 S-adenosyl-L-methionine YP_003103399.1 TIGRFAM: dethiobiotin synthase; KEGG: ade:Adeh_0070 dethiobiotin synthase YP_003103400.1 PFAM: glutaredoxin; KEGG: mno:Mnod_5953 glutaredoxin 3 YP_003103401.1 KEGG: MFS transporter YP_003103402.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: scl:sce0693 adenosylmethionine--8-amino-7- oxononanoate transaminase YP_003103403.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase YP_003103404.1 KEGG: GA25950 gene product from transcript GA25950- RA YP_003103405.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bce:BC0204 bicyclomycin resistance protein YP_003103406.1 KEGG: gsu:GSU0082 ribosomal large subunit pseudouridine synthase D; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein YP_003103407.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: sde:Sde_2565 signal peptidase II YP_003103408.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: scl:sce1210 hypothetical protein YP_003103409.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli YP_003103410.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sme:SMa1660 hypothetical protein YP_003103411.1 PFAM: protein of unknown function DUF167; KEGG: scl:sce8156 hypothetical protein YP_003103412.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 2 subfamily; some organisms carry two different copies of this enzyme; in some organisms, the type 2 subfamily is associated with resistance to the antibiotic pseudomonic acid (mupirocin) YP_003103413.1 KEGG: col-102; COllagen YP_003103414.1 PFAM: DivIVA family protein; KEGG: hypothetical protein YP_003103415.1 PFAM: protein of unknown function YGGT YP_003103416.1 PFAM: protein of unknown function DUF552; KEGG: bha:BH2549 hypothetical protein YP_003103417.1 PFAM: alanine racemase domain protein; KEGG: pag:PLES_03921 PLP dependent enzyme YP_003103418.1 PFAM: protein of unknown function DUF152; KEGG: tgr:Tgr7_0816 protein of unknown function DUF152 YP_003103419.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: bat:BAS3757 cell division protein FtsZ YP_003103420.1 PFAM: polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: ade:Adeh_3776 cell division protein FtsQ YP_003103421.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_003103422.1 KEGG: aba:Acid345_3629 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003103423.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bce:BC3911 stage V sporulation protein E YP_003103424.1 KEGG: rec:RHECIAT_PA0000107 hypothetical protein YP_003103426.1 KEGG: sfu:Sfum_1001 FAD dependent oxidoreductase YP_003103427.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: scl:sce1662 UDP-N-acetylmuramoylalanine-D- glutamate ligase YP_003103428.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_003103429.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: aeh:Mlg_2197 UDP-N-acetylmuramoyl-tripeptide-- D-alanyl-D-alanine ligase YP_003103430.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: ade:Adeh_3766 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase YP_003103431.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerization domain; KEGG: ppd:Ppro_3295 peptidoglycan glycosyltransferase YP_003103432.1 KEGG: hypothetical protein YP_003103433.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: gbm:Gbem_0483 S-adenosyl-methyltransferase MraW YP_003103434.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: bha:BH2576 cell division protein MraZ YP_003103435.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: bha:BH0604 methanol dehydrogenase regulatory protein YP_003103436.1 PFAM: protein of unknown function DUF58; KEGG: gur:Gura_0188 hypothetical protein YP_003103437.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: aba:Acid345_2146 transglutaminase-like YP_003103439.1 KEGG: GF24314 gene product from transcript GF24314- RA YP_003103440.1 KEGG: similar to keratinocytes proline-rich protein YP_003103442.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide- binding; KEGG: lch:Lcho_0755 Crp/FNR family transcriptional regulator YP_003103443.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: acp:A2cp1_0159 DNA-directed DNA polymerase YP_003103444.1 PFAM: amidohydrolase 2; KEGG: hypothetical protein YP_003103445.1 PFAM: glutamine synthetase catalytic region; KEGG: pag:PLES_59041 glutamine synthetase YP_003103446.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rpb:RPB_3555 RNA polymerase sigma factor YP_003103447.1 PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: ank:AnaeK_0691 methyltransferase type 11 YP_003103448.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: gox:GOX1063 chromosome partitioning protein ParA YP_003103449.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: afw:Anae109_1725 DNA-(apurinic or apyrimidinic site) lyase YP_003103450.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_003103451.1 PFAM: regulatory protein TetR; KEGG: rso:RS05498 transcription regulator protein YP_003103452.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_6660 short-chain dehydrogenase/reductase SDR YP_003103453.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: bmv:BMASAVP1_A3006 uracil-xanthine permease YP_003103454.1 KEGG: jan:Jann_1769 mucin-associated surface protein YP_003103455.1 PFAM: PspA/IM30 family protein; KEGG: GG12650 gene product from transcript GG12650- RA YP_003103456.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pde:Pden_1785 helix-turn-helix domain protein YP_003103457.1 PFAM: CinA domain protein; KEGG: hypothetical protein YP_003103458.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: bha:BH2386 phosphatidylglycerophosphate synthase YP_003103459.1 KEGG: ank:AnaeK_0100 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003103460.1 catalyzes the conversion of l-glutamate to a-N-acetyl-l-glutamate in arginine biosynthesis YP_003103461.1 SMART: regulatory protein MerR; KEGG: bmn:BMA10247_A1013 MerR family transcriptional regulator YP_003103462.1 PFAM: Prokaryotic phospholipase A2; KEGG: hypothetical protein YP_003103463.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bha:BH2395 hypothetical protein YP_003103464.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dde:Dde_1136 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003103465.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: gme:Gmet_0366 hypothetical protein YP_003103466.1 KEGG: bha:BH2399 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003103468.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: sus:Acid_3693 serine/threonine protein kinase YP_003103469.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor YP_003103470.1 PFAM: HicB family protein; KEGG: GI22065 gene product from transcript GI22065- RA YP_003103471.1 KEGG: aba:Acid345_3530 hypothetical protein YP_003103472.1 PFAM: regulatory protein TetR; KEGG: bja:bll5689 transcriptional regulatory protein YP_003103473.1 PFAM: aldo/keto reductase; KEGG: rlt:Rleg2_2710 aldo/keto reductase YP_003103474.1 PFAM: protein of unknown function DUF1006; KEGG: pae:PA2844 hypothetical protein YP_003103475.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bac:BamMC406_4804 GCN5-related N- acetyltransferase YP_003103478.1 KEGG: bcz:BCZK1415 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003103479.1 PFAM: peptidase M16 domain protein; KEGG: gur:Gura_1907 peptidase M16 domain-containing protein YP_003103480.1 KEGG: ilo:IL0964 polynucleotide phosphorylase/polyadenylase; TIGRFAM: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein YP_003103481.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: gsu:GSU1592 30S ribosomal protein S15 YP_003103482.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: scl:sce5087 hypothetical protein YP_003103483.1 KEGG: oan:Oant_1395 ABC transporter YP_003103484.1 TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: FAD synthetase; riboflavin kinase; KEGG: dvm:DvMF_1762 riboflavin biosynthesis protein RibF YP_003103485.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: ade:Adeh_1105 tRNA pseudouridine synthase B YP_003103486.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_3100 major facilitator transporter YP_003103487.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: MATE efflux family protein YP_003103488.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: pca:Pcar_1558 exopolyphosphatase related protein YP_003103489.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: tcx:Tcr_1124 ribosome-binding factor A YP_003103490.1 PFAM: protein of unknown function DUF503; KEGG: sus:Acid_5182 hypothetical protein YP_003103491.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Ras family protein; KEGG: dvm:DvMF_2513 translation initiation factor IF-2 YP_003103492.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination YP_003103493.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins YP_003103494.1 KEGG: hypothetical protein YP_003103496.1 KEGG: AGAP011399-PA YP_003103497.1 PFAM: aminotransferase class V; KEGG: acp:A2cp1_4498 aminotransferase class V YP_003103498.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3419 short-chain dehydrogenase/reductase SDR YP_003103499.1 PFAM: protein of unknown function UPF0047; KEGG: rpe:RPE_0423 protein of unknown function UPF0047 YP_003103500.1 KEGG: scl:sce6476 hypothetical protein YP_003103502.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ade:Adeh_0672 haloacid dehalogenase-like hydrolase YP_003103503.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_003103504.1 KEGG: rle:RL3033 hypothetical protein YP_003103505.1 PFAM: protein of unknown function DUF328; KEGG: sun:SUN_0122 hypothetical protein YP_003103506.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: swi:Swit_2706 Crp/FNR family transcriptional regulator YP_003103507.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: gsu:GSU1992 Crp/FNR family transcriptional regulator YP_003103508.1 PFAM: protein of unknown function RIO1; SMART: protein of unknown function RIO1; KEGG: afw:Anae109_3105 protein of unknown function RIO1 YP_003103509.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; KEGG: smt:Smal_0480 DEAD/DEAH box helicase domain protein YP_003103510.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cvi:CV_0813 uroporphyrin-III C- methyltransferase YP_003103511.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to trypsin-like proteinase YP_003103512.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: mag:amb0298 precorrin-3B methylase YP_003103513.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: ppd:Ppro_3231 precorrin-4 C11- methyltransferase YP_003103514.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: gsu:GSU3006 cobyrinic acid a,c-diamide synthase YP_003103515.1 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide YP_003103516.1 KEGG: rso:RS03742 chelatase protein; PFAM: von Willebrand factor type A; magnesium chelatase ChlI subunit; SMART: von Willebrand factor type A; ATPase AAA YP_003103517.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bid:Bind_0032 short-chain dehydrogenase/reductase SDR YP_003103518.1 PFAM: regulatory protein TetR; KEGG: scl:sce4851 TetR family transcriptional regulator YP_003103519.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine YP_003103520.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pap:PSPA7_0190 hypothetical protein YP_003103521.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to oviductin YP_003103522.1 PFAM: lysine exporter protein (LYSE/YGGA); KEGG: cak:Caul_0349 lysine exporter protein LysE/YggA YP_003103523.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: similar to trypsin-like proteinase YP_003103524.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: GK19455 gene product from transcript GK19455- RA YP_003103525.1 PFAM: peptidase M48 Ste24p; KEGG: hypothetical protein YP_003103526.1 PFAM: alpha/beta hydrolase fold; KEGG: abb:ABBFA_001367 alpha/beta hydrolase fold family protein YP_003103527.1 KEGG: tgr:Tgr7_3169 streptogramin A acetyl transferase YP_003103528.1 KEGG: scl:sce5003 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATPase AAA; peptidase S16 lon domain protein; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; ATPase AAA YP_003103529.1 PFAM: protein of unknown function DUF574; KEGG: scl:sce6070 hypothetical protein YP_003103530.1 PFAM: Patatin; KEGG: acp:A2cp1_0560 thermosensitive mutation transmembrane protein, SuhR YP_003103531.1 PFAM: polysaccharide deacetylase; KEGG: aba:Acid345_4749 polysaccharide deacetylase YP_003103532.1 PFAM: PEBP family protein; KEGG: eta:ETA_22690 hypothetical protein YP_003103533.1 catalyzes the reduction of mycothione or glutathione to mycothione or glutathione disulfide YP_003103534.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpi:Rpic_4548 major facilitator superfamily MFS_1 YP_003103535.1 PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: psa:PST_2058 probable transcriptional regulator YP_003103536.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rlt:Rleg2_1625 transcriptional regulator, LysR family YP_003103537.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pae:PA4779 hypothetical protein YP_003103538.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SNO glutamine amidotransferase; cobyrinic acid ac-diamide synthase; KEGG: aeh:Mlg_2812 adenosylcobyric acid synthase (glutamine-hydrolysing) YP_003103539.1 KEGG: bbt:BBta_2719 hypothetical protein YP_003103540.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: afw:Anae109_2425 methionine aminopeptidase YP_003103541.1 PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; KEGG: mxa:MXAN_7139 penicillin-binding protein YP_003103542.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_1267 hypothetical protein YP_003103543.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_003103544.1 PFAM: peptidase M50; KEGG: gbm:Gbem_2749 membrane-associated zinc metalloprotease YP_003103545.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_003103546.1 PFAM: transglycosylase-associated protein; KEGG: csa:Csal_2587 transglycosylase-associated protein YP_003103548.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003103549.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: xcb:XC_0113 two-component system sensor protein YP_003103550.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_6381 ornithine carbamoyltransferase YP_003103551.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sus:Acid_2368 binding-protein-dependent transport systems inner membrane component YP_003103552.1 PFAM: extracellular solute-binding protein family 1; KEGG: cak:Caul_3951 extracellular solute-binding protein YP_003103553.1 KEGG: pap:PSPA7_1534 polyamine transport protein PotA; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; TOBE domain protein; transport-associated OB domain protein; SMART: ATPase AAA YP_003103555.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: afw:Anae109_0235 protein kinase YP_003103557.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance YP_003103558.1 PFAM: transcriptional regulator PadR family protein; KEGG: scl:sce3089 PadR family transcriptional regulator YP_003103559.1 PFAM: aldo/keto reductase; KEGG: rlt:Rleg2_1253 aldo/keto reductase YP_003103560.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: acp:A2cp1_3874 methyltransferase type 11 YP_003103561.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sse:Ssed_0208 glyoxalase/bleomycin resistance protein/dioxygenase YP_003103562.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mgm:Mmc1_1845 phosphatidate cytidylyltransferase YP_003103563.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: bha:BH2424 ribosome recycling factor YP_003103564.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: gme:Gmet_1252 uridylate kinase YP_003103565.1 TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: bmv:BMASAVP1_A2055 elongation factor Ts YP_003103566.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: bha:BH2427 30S ribosomal protein S2 YP_003103567.1 PFAM: peptidase M23; KEGG: fibrocystin-L-like protein YP_003103568.1 KEGG: mgm:Mmc1_3037 RNA polymerase, sigma 28 subunit, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 3 domain protein; sigma- 70 region 4 domain protein YP_003103569.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: afw:Anae109_2689 tyrosine recombinase XerC YP_003103570.1 KEGG: ank:AnaeK_3688 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_003103571.1 PFAM: protein of unknown function UPF0102; KEGG: dps:DP2807 hypothetical protein YP_003103573.1 PFAM: ribonuclease HII/HIII; KEGG: ribonuclease H YP_003103574.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: TPP1; chloroplast thylakoid processing peptidase; K03100 signal peptidase I YP_003103575.1 KEGG: signal peptidase, ; K03100 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_003103576.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: bha:BH2478 50S ribosomal protein L19 YP_003103577.1 KEGG: glo:Glov_2453 tRNA (guanine-N1)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003103578.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: dds:Ddes_1801 16S rRNA processing protein RimM YP_003103579.1 KEGG: bha:BH2482 hypothetical protein YP_003103580.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: swi:Swit_2657 30S ribosomal protein S16 YP_003103581.1 PFAM: LamB/YcsF family protein; KEGG: pst:PSPTO_5378 hypothetical protein YP_003103582.1 PFAM: abortive infection protein; KEGG: pcr:Pcryo_0794 abortive infection protein YP_003103583.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pzu:PHZ_c3063 Xaa-Pro dipeptidase YP_003103584.1 KEGG: dds:Ddes_1804 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_003103585.1 KEGG: mlo:mll6593 hypothetical protein YP_003103586.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; also involved in adenylylating and deadelnylyating GlnK YP_003103587.1 PFAM: nitrogen regulatory protein P-II; KEGG: cja:CJA_3390 nitrogen regulatory protein P-II YP_003103588.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: pca:Pcar_2589 ammonium transporter YP_003103589.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: hypothetical protein YP_003103590.1 catalyzes the formation of S-ureidoglycolate and urea from allantoate YP_003103591.1 KEGG: scl:sce5876 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3 YP_003103592.1 TIGRFAM: OHCU decarboxylase; KEGG: spe:Spro_0938 urate oxidase, N- terminal YP_003103593.1 KEGG: scl:sce4023 uricase; TIGRFAM: urate oxidase; PFAM: Uricase YP_003103595.1 KEGG: scl:sce5882 hypothetical protein YP_003103596.1 KEGG: mxa:MXAN_6441 malate synthase; TIGRFAM: malate synthase A; PFAM: malate synthase YP_003103597.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bid:Bind_3440 IclR family transcriptional regulator YP_003103599.1 KEGG: pmy:Pmen_4175 signal recognition particle- docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_003103600.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_003103601.1 PFAM: Na+/solute symporter; KEGG: gdi:GDI1156 sodium cotransporter YP_003103602.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pzu:PHZ_c1335 L-2,4-diaminobutyric acid acetyltransferase YP_003103605.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: gur:Gura_4298 phospholipid/glycerol acyltransferase YP_003103606.1 TIGRFAM: chromosome segregation protein SMC; PFAM: hypothetical protein; SMCs flexible hinge domain protein; KEGG: bha:BH2487 chromosome segregation SMC protein YP_003103607.1 KEGG: bps:BPSL1109 hypothetical protein YP_003103608.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rpb:RPB_3549 RNA polymerase sigma factor YP_003103609.1 PFAM: acylphosphatase; KEGG: met:M446_0372 acylphosphatase YP_003103610.1 PFAM: SCP-like extracellular; KEGG: bcy:Bcer98_1016 hypothetical protein YP_003103612.1 KEGG: hypothetical protein LOC763622 YP_003103613.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bja:blr2205 dehydrogenase YP_003103614.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: set:SEN0666 KDP operon transcriptional regulatory protein YP_003103615.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmj:BMULJ_04432 MarR family transcriptional regulator YP_003103616.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_003103618.1 KEGG: sat:SYN_00796 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003103619.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_003103620.1 PFAM: protein of unknown function DUF177; KEGG: afw:Anae109_2742 hypothetical protein YP_003103621.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003103622.1 KEGG: bha:BH2589 lipopolysaccharide core biosynthesis; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003103623.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase KEGG: scl:sce8059 methylase YP_003103624.1 KEGG: mxa:MXAN_6257 hypothetical protein YP_003103627.1 biotin-containing enzyme that catalyzes a two step carboxylation of pyruvate to oxaloacetate YP_003103628.1 KEGG: hypothetical protein YP_003103630.1 catalyzes branch migration in Holliday junction intermediates YP_003103631.1 PFAM: Dak phosphatase; KEGG: bsu:BSU15840 hypothetical protein YP_003103632.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: aba:Acid345_0165 LSU ribosomal protein L28P YP_003103633.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; KEGG: ade:Adeh_4303 NAD-dependent epimerase/dehydratase YP_003103634.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: acp:A2cp1_4259 transcriptional regulator, MarR family YP_003103635.1 PFAM: uracil-DNA glycosylase; KEGG: mxa:MXAN_0760 uracil-DNA glycosylase YP_003103636.1 KEGG: sil:SPO1946 transferase family protein YP_003103637.1 PFAM: GCN5-related N-acetyltransferase; KEGG: hypothetical protein YP_003103638.1 KEGG: gur:Gura_0692 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003103639.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: pzu:PHZ_c3044 transcriptional regulator, Lrp/AsnC family YP_003103641.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_003103642.1 PFAM: cysteine dioxygenase type I; cupin; KEGG: mxa:MXAN_0927 cysteine dioxygenase, type I YP_003103643.1 KEGG: aba:Acid345_2785 hypothetical protein YP_003103644.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: ade:Adeh_2233 GntR family transcriptional regulator YP_003103646.1 PFAM: protein of unknown function DUF397 YP_003103648.1 KEGG: azc:AZC_3655 hypothetical protein YP_003103650.1 catalyzes the formation of cysteine and 2-oxobutanoate from cystathionine YP_003103651.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase ApbA/PanE domain protein; NADP oxidoreductase coenzyme F420-dependent; KEGG: ade:Adeh_0396 glycerol-3-phosphate dehydrogenase (NAD(P)+) YP_003103652.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: ank:AnaeK_4035 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003103653.1 KEGG: pzu:PHZ_c2537 hypothetical protein YP_003103654.1 KEGG: hypothetical protein YP_003103655.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_003103656.1 PFAM: NUDIX hydrolase; phosphoglycerate mutase; KEGG: bja:bll6630 hypothetical protein YP_003103657.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: hypothetical protein LOC679057 YP_003103658.1 KEGG: aba:Acid345_2915 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein YP_003103659.1 KEGG: aba:Acid345_2916 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein YP_003103660.1 PFAM: transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_B1947 transcriptional regulator, IclR family YP_003103661.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bha:BH0473 hypothetical protein YP_003103662.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_003103663.1 PFAM: monooxygenase FAD-binding; KEGG: mrd:Mrad2831_2174 monooxygenase FAD-binding YP_003103664.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: scl:sce2870 fumarylacetoacetase YP_003103665.1 KEGG: hypothetical protein YP_003103666.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase; KEGG: scl:sce3734 alpha- isopropylmalate/homocitrate synthase family transferase YP_003103667.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sfu:Sfum_3031 isocitrate/isopropylmalate dehydrogenase YP_003103668.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: glo:Glov_1721 peptidase S8 and S53 subtilisin kexin sedolisin YP_003103670.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_003103671.1 PFAM: protein of unknown function DUF397 YP_003103672.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_003103673.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit YP_003103674.1 acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate YP_003103675.1 KEGG: mucin-associated surface protein (MASP) YP_003103676.1 PFAM: vitamin K epoxide reductase; SMART: vitamin K epoxide reductase; KEGG: hypothetical protein YP_003103677.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_003103678.1 PFAM: DoxX family protein; KEGG: slo:Shew_2277 DoxX family protein YP_003103679.1 KEGG: hypothetical protein YP_003103680.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: hypothetical protein YP_003103681.1 PFAM: alpha/beta hydrolase fold; KEGG: afw:Anae109_2061 alpha/beta hydrolase fold YP_003103682.1 KEGG: bha:BH2090 glucose dehydrogenase-B YP_003103683.1 PFAM: hypothetical protein; hypothetical protein; SMART: hypothetical protein; KEGG: sus:Acid_3454 tetratricopeptide TPR_4 YP_003103684.1 KEGG: clx-1; COllagen sequence X-hybridizing YP_003103685.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_003103687.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_003103688.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: gsu:GSU3383 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_003103689.1 PFAM: amino acid-binding ACT domain protein; KEGG: bsu:BSU23550 malolactic enzyme YP_003103690.1 PFAM: hypothetical protein; KEGG: mgm:Mmc1_2013 zinc finger, SWIM domain protein YP_003103691.1 KEGG: mca:MCA2438 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4- type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase; BRCT domain protein YP_003103693.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: acr:Acry_2159 LysR family transcriptional regulator YP_003103694.1 PFAM: conserved hypothetical protein; KEGG: xau:Xaut_2089 hypothetical protein YP_003103695.1 PFAM: methionine synthase vitamin-B12 independent; KEGG: dal:Dalk_5194 hypothetical protein YP_003103697.1 KEGG: bcb:BCB4264_A1184 hypothetical protein YP_003103698.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_003103699.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cysteine desulfurase NifS; K04487 cysteine desulfurase YP_003103700.1 PFAM: major facilitator superfamily MFS_1; KEGG: dac:Daci_3895 major facilitator transporter YP_003103701.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: cti:RALTA_A2392 phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase transmembrane protein YP_003103702.1 KEGG: eba:ebA5570 hypothetical protein YP_003103703.1 PFAM: electron transfer flavoprotein alpha subunit; electron transfer flavoprotein alpha/beta-subunit; KEGG: met:M446_2006 electron transfer flavoprotein alpha subunit YP_003103704.1 PFAM: electron transfer flavoprotein alpha/beta- subunit; KEGG: sat:SYN_02636 electron transfer flavoprotein beta-subunit YP_003103705.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bsu:BSU11110 hypothetical protein YP_003103707.1 KEGG: hypothetical protein YP_003103708.1 KEGG: Eln; elastin YP_003103709.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sus:Acid_7436 methyltransferase type 11 YP_003103710.1 PFAM: glycoside hydrolase family 57; KEGG: scl:sce1626 hypothetical protein YP_003103711.1 PFAM: glycosyl transferase group 1; KEGG: bha:BH1415 hypothetical protein YP_003103713.1 KEGG: afw:Anae109_4021 dual specificity protein phosphatase YP_003103714.1 KEGG: bpy:Bphyt_6269 acetyltransferase YP_003103715.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: asa:ASA_2899 ribonucleoside hydrolase 1 YP_003103717.1 PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: bja:bll7234 hypothetical protein YP_003103718.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dal:Dalk_2640 enoyl-CoA hydratase/isomerase YP_003103719.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sfu:Sfum_3281 ABC transporter YP_003103720.1 KEGG: ade:Adeh_1056 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003103721.1 PFAM: cysteine dioxygenase type I; KEGG: mxa:MXAN_0927 cysteine dioxygenase, type I YP_003103722.1 SMART: rhodanese domain protein; KEGG: hypothetical protein YP_003103723.1 PFAM: hypothetical protein; KEGG: pin:Ping_0445 colicin uptake-like protein YP_003103724.1 KEGG: gsu:GSU0371 carbohydrate phosphorylase family protein; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003103725.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: afw:Anae109_3071 alpha amylase catalytic region YP_003103726.1 KEGG: mxa:MXAN_3684 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003103727.1 PFAM: aminoglycoside phosphotransferase; KEGG: rce:RC1_0516 trehalose synthase YP_003103728.1 KEGG: mxa:MXAN_3682 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003103729.1 KEGG: mno:Mnod_6074 protein of unknown function zinc metallopeptidase YP_003103731.1 PFAM: protein of unknown function zinc metallopeptidase KEGG: aba:Acid345_4616 protein of unknown function, zinc metallopeptidase YP_003103732.1 PFAM: Thioredoxin domain; KEGG: trx; thioredoxin; K05838 thioredoxin YP_003103733.1 KEGG: bpd:BURPS668_A3050 hypothetical protein YP_003103734.1 PFAM: protein of unknown function DUF77; KEGG: mgm:Mmc1_2182 protein of unknown function DUF77 YP_003103735.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcz:BCZK0946 MarR family transcriptional regulator YP_003103736.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce2125 hypothetical protein YP_003103737.1 KEGG: smt:Smal_2278 inner membrane protein YP_003103738.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce5573 ABC transporter ATP- binding protein YP_003103740.1 PFAM: transposase IS4 family protein; KEGG: similar to F57G4.9 YP_003103743.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator YP_003103744.1 KEGG: hypothetical protein YP_003103745.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: smd:Smed_0345 ABC transporter YP_003103746.1 PFAM: inner-membrane translocator; KEGG: smd:Smed_0344 monosaccharide-transporting ATPase YP_003103747.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rbsB; ABC transporter substrate binding protein (ribose); K10439 ribose transport system substrate-binding protein YP_003103748.1 KEGG: hne:HNE_0316 hypothetical protein YP_003103749.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bph:Bphy_7397 TAP domain-containing protein YP_003103750.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bph:Bphy_7397 TAP domain-containing protein YP_003103751.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bsu:BSU33080 hypothetical protein YP_003103752.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; KEGG: bce:BC2216 two-component sensor protein YhcY YP_003103754.1 PFAM: N-acetyltransferase; KEGG: nar:Saro_0952 N-acetyltransferase YP_003103757.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis YP_003103758.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gbm:Gbem_0558 methylmalonyl-CoA epimerase YP_003103759.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003103760.1 PFAM: alpha/beta hydrolase fold; KEGG: mxa:MXAN_3278 hydrolase, alpha/beta fold family YP_003103761.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mxa:MXAN_4010 acetyltransferase, GNAT family YP_003103763.1 TIGRFAM: regulatory protein, FmdB family; KEGG: mgm:Mmc1_2457 regulatory protein, FmdB family YP_003103765.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; KEGG: dde:Dde_1180 phosphoenolpyruvate--protein phosphotransferase YP_003103766.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: gdi:GDI0264 PTS-dependent dihydroxyacetone kinase YP_003103767.1 KEGG: gdj:Gdia_2328 dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_003103768.1 PFAM: Aldehyde Dehydrogenase; KEGG: aba:Acid345_1443 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_003103771.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: sus:Acid_3843 SSS family solute/sodium (Na+) symporter YP_003103774.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bra:BRADO4105 transcriptional regulator YP_003103775.1 PFAM: protein of unknown function DUF397 YP_003103776.1 KEGG: dar:Daro_0441 dihydrolipoamide acetyltransferase YP_003103777.1 PFAM: protein of unknown function DUF91; KEGG: bvi:Bcep1808_6934 hypothetical protein YP_003103778.1 PFAM: NUDIX hydrolase; KEGG: gdj:Gdia_2018 NUDIX hydrolase YP_003103779.1 PFAM: GCN5-related N-acetyltransferase; KEGG: asa:ASA_2273 acetyltransferase YP_003103780.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_0608 enoyl-CoA hydratase/isomerase YP_003103781.1 PFAM: isochorismatase hydrolase; KEGG: cvi:CV_1320 hypothetical protein YP_003103785.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_003103786.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mmr:Mmar10_2358 ATP:cob(I)alamin adenosyltransferase YP_003103788.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_003103789.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_003103790.1 KEGG: lpc:LPC_3298 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_003103791.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_003103792.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: nwi:Nwi_0429 F0F1 ATP synthase subunit delta YP_003103793.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: ilo:IL2623 F0F1 ATP synthase subunit B YP_003103794.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: atpH; ATPase III subunit; K02110 F-type H+- transporting ATPase subunit c YP_003103795.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: acp:A2cp1_4495 ATP synthase F0, A subunit YP_003103798.1 PFAM: glycosyl transferase family 4; KEGG: afw:Anae109_4433 glycosyl transferase family protein YP_003103799.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: bca:BCE_5452 SUA5/YciO/YrdC/YwlC family protein YP_003103800.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: rce:RC1_2636 modification methylase,HemK family YP_003103801.1 E3 component of alpha keto acid dehydrogenase complexes LpdC; forms a homodimer; binds one molecule of FAD monomer; catalyzes NAD+-dependent oxidation of dihydrolipoyl cofactors that are covalently linked to the E2 component YP_003103802.1 PFAM: BAAT/acyl-CoA thioester hydrolase; acyl-CoA thioester hydrolase/bile acid-CoA amino acid N- acetyltransferase; KEGG: sus:Acid_3161 palmitoyl-CoA hydrolase YP_003103803.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: lip:LI0002 peptide chain release factor 1 YP_003103804.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: tbd:Tbd_0039 50S ribosomal protein L31 YP_003103805.1 KEGG: mes:Meso_0153 chromate transporter, chromate ion transporter (CHR) family YP_003103806.1 KEGG: bba:Bd0065 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: ATPase AAA; Cold shock protein YP_003103807.1 KEGG: sus:Acid_0902 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003103808.1 TIGRFAM: threonine synthase; PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tgr:Tgr7_1440 threonine synthase YP_003103809.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_003103810.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bsu:BSU23380 diaminopimelate decarboxylase YP_003103811.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase YP_003103812.1 KEGG: scl:sce2901 hypothetical protein YP_003103813.1 PFAM: protein of unknown function DUF305; KEGG: mmr:Mmar10_0047 hypothetical protein YP_003103814.1 TIGRFAM: alpha-1,2-mannosidase; PFAM: glycosyl hydrolase 92; coagulation factor 5/8 type domain protein; KEGG: sml:Smlt3935 glycosyltransferase YP_003103815.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mpo:Mpop_4086 cation diffusion facilitator family transporter YP_003103816.1 PFAM: protein of unknown function DUF262; KEGG: xau:Xaut_2248 hypothetical protein YP_003103817.1 PFAM: glycoside hydrolase family 5; KEGG: pla:Plav_0833 hypothetical protein YP_003103819.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; SMART: ATPase AAA; KEGG: sus:Acid_5780 serine/threonine protein kinase YP_003103820.1 PFAM: alpha/beta hydrolase fold; KEGG: azo:azo0046 haloacetate dehalogenase YP_003103821.1 SMART: helix-turn-helix domain protein YP_003103824.1 KEGG: mca:MCA0835 fic family protein YP_003103825.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mlo:mll5358 hypothetical protein YP_003103826.1 PFAM: transcription activator effector binding; KEGG: aav:Aave_4607 transcription activator, effector binding YP_003103827.1 PFAM: luciferase-like monooxygenase; KEGG: pla:Plav_0210 luciferase family protein YP_003103828.1 PFAM: GTPase EngC; SMART: ATPase AAA; KEGG: gsu:GSU2530 GTPase YjeQ YP_003103830.1 PFAM: nitroreductase; KEGG: bcz:pE33L466_0413 NADH oxidase YP_003103831.1 PFAM: aldo/keto reductase; KEGG: stm:STM2406 oxidoreductase YP_003103832.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: scl:sce0662 LacI family transcription regulator YP_003103833.1 KEGG: ret:RHE_CH00480 beta-mannosidase protein YP_003103834.1 PFAM: glycoside hydrolase clan GH-D; KEGG: esa:ESA_03854 hypothetical protein YP_003103835.1 KEGG: cvi:CV_1450 hypothetical protein YP_003103836.1 PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA; KEGG: vsp:VS_II1529 ABC systems: ATP-binding protein YP_003103837.1 PFAM: ABC transporter; binding-protein- dependent transport systems inner membrane component; SMART: ATPase AAA; KEGG: mxa:MXAN_6553 oligopeptide/dipeptide ABC transporter, permease/ATP-binding protein YP_003103838.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce4301 peptide ABC transporter, permease protein YP_003103839.1 PFAM: extracellular solute-binding protein family 5; KEGG: scl:sce4302 ABC-type dipeptide transport system, periplasmic component YP_003103840.1 PFAM: ROK family protein; KEGG: mxa:MXAN_6549 transcriptional regulator, ROK family YP_003103842.1 KEGG: bav:BAV1845 monooxygenase YP_003103843.1 KEGG: bav:BAV1846 monooxygenase YP_003103844.1 PFAM: FAD dependent oxidoreductase; KEGG: sus:Acid_5898 N-methyltryptophan oxidase YP_003103845.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: ppd:Ppro_3005 HemK family modification methylase YP_003103846.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor YP_003103847.1 PFAM: YCII-related; KEGG: bmj:BMULJ_04986 hypothetical protein YP_003103848.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce0732 AraC family transcriptional regulator YP_003103849.1 PFAM: NmrA family protein; KEGG: scl:sce0731 hypothetical protein YP_003103850.1 KEGG: pzu:PHZ_c3387 hypothetical protein YP_003103851.1 PFAM: alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_C0078 zinc-binding dehydrogenase YP_003103852.1 PFAM: regulatory protein TetR; KEGG: mxa:MXAN_2145 transcriptional regulator, TetR family YP_003103853.1 SMART: regulatory protein ArsR; KEGG: met:M446_4445 ArsR family transcriptional regulator YP_003103854.1 PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: afw:Anae109_3817 protein phosphatase 2C-like protein YP_003103855.1 PFAM: ROK family protein; KEGG: cvi:CV_2895 transcriptional regulator protein YP_003103856.1 PFAM: beta-lactamase; KEGG: bcb:BCB4264_A3030 alkaline D-peptidase YP_003103857.1 PFAM: glycoside hydrolase family 18; cellulose- binding family II; SMART: chitinase II; cellulose-binding family II; KEGG: cja:CJA_2611 endo-chitinase, , chi18D YP_003103858.1 KEGG: ppd:Ppro_0186 RecD/TraA family helicase; TIGRFAM: helicase, RecD/TraA family; SMART: ATPase AAA YP_003103859.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: glo:Glov_0588 two component transcriptional regulator, winged helix family YP_003103860.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: lch:Lcho_2475 histidine kinase YP_003103861.1 KEGG: pzu:PHZ_c1830 ABC transporter, ATP-binding protein CydD YP_003103862.1 PFAM: MscS Mechanosensitive ion channel; KEGG: bac:BamMC406_1797 MscS mechanosensitive ion channel YP_003103863.1 KEGG: swi:Swit_4745 RND family efflux transporter MFP subunit YP_003103864.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003103865.1 proposed role in polysaccahride synthesis YP_003103866.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: dvu:DVU3313 LysR family transcriptional regulator YP_003103867.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: ccv:CCV52592_0326 NADP oxidoreductase, coenzyme F420-dependent YP_003103868.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: dac:Daci_0096 flavin reductase domain- containing protein YP_003103870.1 KEGG: GH21940 gene product from transcript GH21940- RA YP_003103872.1 PFAM: transcriptional activator domain; hypothetical protein; hypothetical protein; NB- ARC domain protein; transcriptional regulator domain protein; SMART: ATPase AAA; hypothetical protein; KEGG: scl:sce5225 protein kinase YP_003103873.1 KEGG: hypothetical protein YP_003103874.1 KEGG: pfl:PFL_0190 sensory box-containing diguanylate cyclase, TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein; EAL domain protein; PAS domain containing protein YP_003103875.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: shw:Sputw3181_3433 protease Do YP_003103876.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: aeh:Mlg_1719 acyl-CoA dehydrogenase domain- containing protein YP_003103877.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_003103879.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: reu:Reut_C6425 butyryl-CoA dehydrogenase YP_003103880.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: mag:amb0674 acetyl-/propionyl-coenzyme A carboxylase alpha chain YP_003103881.1 PFAM: carboxyl transferase; KEGG: bmj:BMULJ_05049 propionyl-CoA carboxylase beta chain YP_003103882.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B5488 TetR family transcriptional regulator YP_003103883.1 KEGG: mxa:MXAN_4195 hypothetical protein YP_003103884.1 PFAM: protein of unknown function DUF1023; KEGG: hypothetical protein YP_003103885.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003103886.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003103888.1 PFAM: cellulose-binding family II; Fibronectin type III domain protein; SMART: cellulose-binding family II; Fibronectin type III domain protein; KEGG: azc:AZC_2901 type III fibronectin YP_003103889.1 KEGG: ank:AnaeK_2457 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003103890.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_003103891.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: scl:sce9140 oxidoreductase YP_003103894.1 PFAM: proteinase inhibitor I16 subtilisin-type inhibitor YP_003103895.1 PFAM: glutathione peroxidase; KEGG: pap:PSPA7_4682 glutathione peroxidase YP_003103896.1 KEGG: pap:PSPA7_2808 L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003103897.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: bcr:BCAH187_A5133 glycine cleavage system H protein YP_003103898.1 KEGG: dar:Daro_2145 L-alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003103900.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ccs:CCNA_03389 lantibiotic transport ATP- binding protein YP_003103902.1 PFAM: ABC transporter; ABC transporter transmembrane protein; SMART: ATPase AAA; KEGG: see:SNSL254_A2969 ATP binding cassette YP_003103903.1 kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth YP_003103905.1 KEGG: GF17241 gene product from transcript GF17241- RA YP_003103906.1 PFAM: aldo/keto reductase; KEGG: scl:sce5264 sugar-phosphate dehydrogenase YP_003103907.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: ppd:Ppro_0104 helix-turn-helix domain- containing protein YP_003103909.1 PFAM: NB-ARC domain protein; KEGG: scl:sce5225 protein kinase YP_003103912.1 catalyzes the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway YP_003103913.1 TIGRFAM: formiminoglutamate deiminase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: pzu:PHZ_c0464 formiminoglutamate deiminase YP_003103914.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_003103915.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_003103916.1 catalyzes the degradation of histidine to urocanate and ammmonia YP_003103917.1 PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_B0569 transcriptional regulator, IclR family YP_003103918.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: opuAC; substrate-binding region of ABC-type glycine betaine transport system YP_003103919.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ABC transporter; K05846 osmoprotectant transport system permease protein YP_003103920.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: proline/glycine betaine ABC transporter; K05846 osmoprotectant transport system permease protein YP_003103921.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: ABC transporter nucleotide binding/ATPase protein (proline/glycine/betaine) YP_003103922.1 PFAM: protein of unknown function DUF43; KEGG: rpb:RPB_2044 hypothetical protein YP_003103925.1 KEGG: rru:Rru_A3216 hypothetical protein YP_003103927.1 KEGG: dac:Daci_5082 methyl-accepting chemotaxis sensory transducer YP_003103928.1 KEGG: tbd:Tbd_1456 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003103929.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bcb:BCB4264_A4713 malate dehydrogenase YP_003103930.1 KEGG: ecw:EcE24377A_2329 dTDP-4-dehydrorhamnose 3,5- epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_003103931.1 TIGRFAM: nickel-type superoxide dismutase maturation protease; PFAM: peptidase S24 and S26 domain protein; KEGG: peptidase S24-like domain containing protein; K09647 mitochondrial inner membrane protease subunit 1 YP_003103932.1 KEGG: mmw:Mmwyl1_1415 superoxide dismutase Ni-type; TIGRFAM: superoxide dismutase, Ni; PFAM: superoxide dismutase Ni-type YP_003103933.1 KEGG: bur:Bcep18194_B0516 hypothetical protein YP_003103934.1 PFAM: phosphoglycerate mutase; KEGG: rle:RL0954 phosphoglycerate mutase YP_003103935.1 PFAM: protein of unknown function DUF574; KEGG: mxa:MXAN_2293 hypothetical protein YP_003103936.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap; KEGG: scl:sce6803 serine protease YP_003103938.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: mag:amb0267 Sphingosine kinase and enzyme related to diacylglycerol kinase YP_003103939.1 PFAM: transcription factor WhiB YP_003103940.1 PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: pca:Pcar_2710 hypothetical protein YP_003103941.1 TIGRFAM: anti-sigma factor; KEGG: tgr:Tgr7_1713 transmembrane anti- sigma factor YP_003103942.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: scl:sce7566 ECF family RNA polymerase sigma factor YP_003103943.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: hch:HCH_01964 hypothetical protein YP_003103944.1 KEGG: rle:pRL110093 hypothetical protein YP_003103945.1 PFAM: protein of unknown function DUF159; KEGG: dal:Dalk_1121 protein of unknown function DUF159 YP_003103946.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_003103947.1 PFAM: GTPase EngC; KEGG: cvi:CV_2365 ribosome-associated GTPase YP_003103948.1 PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: slo:Shew_2437 hypothetical protein YP_003103950.1 TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: maq:Maqu_3067 hypothetical protein YP_003103951.1 PFAM: aminoglycoside phosphotransferase; KEGG: mch:Mchl_2091 aminoglycoside phosphotransferase YP_003103952.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sde:Sde_1711 von Willebrand factor, type A YP_003103953.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: ACAD10; acyl-Coenzyme A dehydrogenase family, member 10; K11729 acyl-CoA dehydrogenase family member 10 YP_003103955.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins YP_003103956.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: probable plastid-specific ribosomal protein PSRP-1 precursor YP_003103957.1 KEGG: acp:A2cp1_0258 phosphoribosyltransferase YP_003103958.1 KEGG: efe:EFER_0542 adhesin for cattle intestine colonization YP_003103959.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: gbm:Gbem_2673 heavy metal sensor signal transduction histidine kinase YP_003103960.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sat:SYN_00981 response regulator YP_003103961.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP) YP_003103962.1 PFAM: protein of unknown function DUF397 YP_003103965.1 PFAM: asparagine synthase; KEGG: swi:Swit_4548 asparagine synthase YP_003103966.1 KEGG: ank:AnaeK_0240 FAD dependent oxidoreductase YP_003103967.1 PFAM: GCN5-related N-acetyltransferase; KEGG: vch:VCA0417 acetyltransferase YP_003103969.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_003103970.1 PFAM: amino acid permease-associated region; aromatic amino acid permease; KEGG: rpi:Rpic_1962 amino acid permease-associated region YP_003103971.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: hch:HCH_04023 Co/Zn/Cd cation transporter YP_003103972.1 TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; KEGG: scl:sce4699 mannose-6-phosphate isomerase YP_003103973.1 KEGG: mch:Mchl_4903 double-strand break repair protein AddB YP_003103974.1 PFAM: protein of unknown function DUF343; KEGG: mes:Meso_3270 protein of unknown function DUF343 YP_003103975.1 converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells YP_003103977.1 KEGG: acp:A2cp1_1564 protein of unknown function DUF1025 YP_003103978.1 KEGG: GF17743 gene product from transcript GF17743- RA YP_003103979.1 PFAM: transcription factor WhiB YP_003103980.1 PFAM: peptidase M50; KEGG: ccs:CCNA_03492 transporter YP_003103981.1 catalyzes the formation of the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) and GMP from actyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO) YP_003103982.1 catalyzes the addition of gamma linked glutamate to 7,8-didemethyl-8-hydroxy-5-deazariboflavin coenzyme F420-0) YP_003103983.1 PFAM: NUDIX hydrolase; KEGG: sml:Smlt2194 hypothetical protein YP_003103984.1 KEGG: transcriptional regulator, AraC family YP_003103985.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: pca:Pcar_2958 mannose-1-phosphate guanyltransferase YP_003103986.1 KEGG: hypothetical protein YP_003103987.1 PFAM: glycosyl transferase family 2; KEGG: ppg:PputGB1_2720 glycosyl transferase family protein YP_003103988.1 PFAM: glycosyl transferase group 1; KEGG: pfo:Pfl01_5687 glycosyl transferase, group 1 YP_003103989.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1409 glycosyl transferase group 1 YP_003103990.1 PFAM: glycosyl transferase family 2; KEGG: pzu:PHZ_c3342 glycosyl transferase YP_003103992.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: dal:Dalk_0014 glycosyl transferase family 2 YP_003103993.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1409 glycosyl transferase group 1 YP_003103994.1 KEGG: gme:Gmet_2472 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; NAD-dependent epimerase/dehydratase YP_003103995.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: dvm:DvMF_0141 dTDP-glucose 4,6-dehydratase YP_003103996.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bat:BAS5047 LytR family transcription antiterminator YP_003103997.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: hypothetical protein YP_003103998.1 KEGG: rpd:RPD_3317 AMP-dependent synthetase and ligase YP_003103999.1 PFAM: DoxX family protein; KEGG: aba:Acid345_2953 DoxX YP_003104000.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sme:SM_b20608 transcriptional regulator, ArsR family protein YP_003104003.1 SMART: helix-turn-helix domain protein YP_003104005.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: met:M446_0773 GntR family transcriptional regulator YP_003104008.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: pha:PSHAb0091 cell divisionFtsK/SpoIIIE domain-containing protein YP_003104011.1 PFAM: integrase family protein; KEGG: bce:BC1272 DNA integration/recombination/invertion protein YP_003104012.1 KEGG: dps:DP2013 hypothetical protein YP_003104013.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: bcb:BCB4264_A5464 acyl-CoA dehydrogenase YP_003104014.1 KEGG: predicted protein; K01588 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003104015.1 KEGG: hypothetical protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase YP_003104017.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: shw:Sputw3181_4019 ABC transporter YP_003104018.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sus:Acid_1594 GntR family transcriptional regulator YP_003104019.1 PFAM: hypothetical protein; KEGG: hypothetical protein LOC682657 YP_003104021.1 PFAM: protein of unknown function DUF397 YP_003104023.1 KEGG: hypothetical protein YP_003104024.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: MUC17; mucin 17, cell surface associated YP_003104025.1 PFAM: GtrA family protein; KEGG: GtrA family protein YP_003104026.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: ade:Adeh_1287 histidinol-phosphate phosphatase YP_003104027.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mxa:MXAN_5313 DNA-binding response regulator YP_003104028.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: ade:Adeh_2915 periplasmic sensor signal transduction histidine kinase YP_003104029.1 KEGG: predicted gene, 100042292 YP_003104030.1 KEGG: Hypothetical protein CBG02561 YP_003104031.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_003104034.1 PFAM: pyruvate carboxyltransferase; KEGG: rce:RC1_0377 3-hydroxy-3-methylglutaryl-CoA lyase YP_003104035.1 PFAM: membrane-flanked domain; KEGG: kpe:KPK_2129 hypothetical protein YP_003104036.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; KEGG: ade:Adeh_2388 biotin--acetyl-CoA-carboxylase ligase YP_003104037.1 PFAM: carboxyl transferase; KEGG: sus:Acid_1492 carboxyl transferase YP_003104040.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell YP_003104041.1 PFAM: sodium:dicarboxylate symporter; KEGG: mes:Meso_3163 sodium:dicarboxylate symporter YP_003104043.1 PFAM: carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: biotin carboxylase; K01946 biotin carboxylase YP_003104044.1 PFAM: protein of unknown function DUF1707 YP_003104045.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bja:bll1358 hydrolase YP_003104048.1 KEGG: mgm:Mmc1_2179 outer membrane adhesin like proteiin YP_003104050.1 PFAM: AIG2 family protein; KEGG: mpo:Mpop_3184 AIG2 family protein YP_003104051.1 catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity YP_003104052.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003104053.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003104054.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mmr:Mmar10_1823 ABC transporter YP_003104055.1 KEGG: cak:Caul_1641 hypothetical protein YP_003104056.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: azc:AZC_2710 glycerol kinase YP_003104057.1 PFAM: major intrinsic protein; KEGG: pha:PSHAb0552 glycerol diffusion channel YP_003104058.1 PFAM: FAD dependent oxidoreductase; monooxygenase FAD-binding; KEGG: vei:Veis_2018 FAD dependent oxidoreductase YP_003104059.1 KEGG: rpa:RPA3963 hypothetical protein YP_003104061.1 KEGG: acr:Acry_1887 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20 YP_003104062.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: pla:Plav_2614 amidohydrolase YP_003104063.1 KEGG: GL26851 gene product from transcript GL26851- RA YP_003104064.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: rru:Rru_A2478 arginine/ornithine transport system ATPase YP_003104065.1 MDM; functions in conversion of succinate to propionate YP_003104066.1 PFAM: methylmalonyl-CoA mutase; KEGG: rru:Rru_A2480 methylmalonyl-CoA mutase YP_003104067.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: pau:PA14_00875 serine/threonine protein kinase PpkA YP_003104068.1 TIGRFAM: purine nucleotide phosphorylase; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: scl:sce5862 hypothetical protein YP_003104069.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: scl:sce4837 phosphoglucomutase/phosphomannomutase YP_003104071.1 KEGG: acp:A2cp1_4175 general secretory system II protein E domain protein YP_003104072.1 PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: mag:amb3964 transcriptional regulator YP_003104073.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: acp:A2cp1_3061 death-on-curing family protein YP_003104074.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: tgr:Tgr7_2434 CopG domain protein DNA-binding domain protein YP_003104075.1 PFAM: regulatory protein TetR; KEGG: pla:Plav_2655 TetR family transcriptional regulator YP_003104076.1 TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: rde:RD1_3976 uracil phosphoribosyltransferase YP_003104077.1 PFAM: pentapeptide repeat protein; KEGG: scl:sce3623 hypothetical protein YP_003104078.1 PFAM: hypothetical protein; pentapeptide repeat protein; SMART: hypothetical protein; KEGG: scl:sce3623 hypothetical protein YP_003104079.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: hypothetical protein YP_003104081.1 SMART: helix-turn-helix domain protein; KEGG: met:M446_4768 XRE family transcriptional regulator YP_003104082.1 PFAM: protein of unknown function DUF397 YP_003104083.1 PFAM: protein of unknown function DUF1707; KEGG: pha:PSHAa0324 hypothetical protein YP_003104084.1 PFAM: NB-ARC domain protein; KEGG: scl:sce6858 hypothetical protein YP_003104089.1 PFAM: NLP/P60 protein; KEGG: bpt:Bpet2252 hypothetical protein YP_003104091.1 KEGG: mgm:Mmc1_2162 hypothetical protein YP_003104093.1 KEGG: afw:Anae109_0100 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase YP_003104094.1 KEGG: CG33251 YP_003104096.1 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate YP_003104097.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: nar:Saro_0145 cytidine deaminase YP_003104098.1 PFAM: inner-membrane translocator; KEGG: bcz:BCZK3548 ABC transporter, permease YP_003104099.1 PFAM: inner-membrane translocator; KEGG: scl:sce7757 ABC transporter permease YP_003104100.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce7755 sugar ABC transporter, ATP- binding protein YP_003104101.1 PFAM: basic membrane lipoprotein; KEGG: smd:Smed_3416 basic membrane lipoprotein YP_003104102.1 KEGG: avhD4; conjugative coupling protein; K03205 type IV secretion system protein VirD4 YP_003104103.1 KEGG: mucin-associated surface protein (MASP) YP_003104104.1 KEGG: eln1; tropoelastin 1 YP_003104105.1 KEGG: Muc19; mucin 19 YP_003104107.1 KEGG: GK19428 gene product from transcript GK19428- RA YP_003104108.1 KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein YP_003104109.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: jan:Jann_3968 succinate dehydrogenase subunit C YP_003104110.1 KEGG: eta:ETA_23070 succinate dehydrogenase hydrophobic membrane anchor protein YP_003104111.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_003104112.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase YP_003104113.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rpc:RPC_4073 serine-type D-Ala-D-Ala carboxypeptidase YP_003104116.1 TIGRFAM: ribonuclease; PFAM: ribonuclease BN; KEGG: ypb:YPTS_4040 ribonuclease YP_003104117.1 KEGG: aha:AHA_3183 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003104118.1 KEGG: hypothetical protein YP_003104119.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis YP_003104120.1 PFAM: protein of unknown function DUF86; KEGG: azo:azo0145 hypothetical protein YP_003104121.1 PFAM: DNA polymerase beta domain protein region; KEGG: aba:Acid345_1968 nucleotidyltransferase YP_003104122.1 KEGG: nma:NMA0348 nuclease; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase YP_003104125.1 Converts isocitrate to alpha ketoglutarate YP_003104126.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: mag:amb4172 membrane-bound metal-dependent hydrolase YP_003104128.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: rle:pRL110201 chaperone YP_003104129.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_2255 serine/threonine protein kinase YP_003104132.1 KEGG: reu:Reut_A1068 ABC transporter permease protein YP_003104133.1 PFAM: protein of unknown function DUF990; KEGG: aav:Aave_2071 protein of unknown function DUF990 YP_003104134.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: scl:sce6750 ABC transporter, ATP-binding protein YP_003104136.1 PFAM: Domain of unknown function DUF1918 YP_003104137.1 PFAM: regulatory protein TetR; KEGG: mes:Meso_0701 transcriptional regulator, TetR family YP_003104138.1 PFAM: inositol monophosphatase; KEGG: mes:Meso_2748 histidinol-phosphate phosphatase YP_003104139.1 catalyzes the oxidation of malate to oxaloacetate YP_003104140.1 PFAM: pentapeptide repeat protein; KEGG: bca:BCE_1946 hypothetical protein YP_003104141.1 KEGG: mgm:Mmc1_1473 conserved hypothetical protein, conserved YP_003104142.1 KEGG: mag:amb0236 hypothetical protein YP_003104144.1 PFAM: protein of unknown function DUF606; KEGG: pmr:PMI1526 hypothetical protein YP_003104145.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: pca:Pcar_2461 methylenetetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclohydrolase YP_003104148.1 KEGG: hypothetical LOC792361 YP_003104149.1 involved in de novo purine biosynthesis YP_003104150.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate YP_003104151.1 KEGG: hypothetical protein LOC690456 YP_003104152.1 KEGG: similar to AGAP004367-PA YP_003104153.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_003104154.1 catalyzes the interconversion of succinyl-CoA and succinate YP_003104155.1 KEGG: mpo:Mpop_4712 hypothetical protein YP_003104156.1 KEGG: bpm:BURPS1710b_2554 hypothetical protein YP_003104157.1 PFAM: peptidase M23; KEGG: peptidase M23B YP_003104159.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: bsu:BSU06610 ATP-dependent DNA helicase YP_003104160.1 TIGRFAM: chorismate mutase; KEGG: cha:CHAB381_1299 chorismate mutase/prephenate dehydratase YP_003104161.1 PFAM: histone deacetylase superfamily; KEGG: HDA08; HDA08 (histone deacetylase 8); histone deacetylase YP_003104162.1 KEGG: gbm:Gbem_3934 protein of unknown function DUF6 transmembrane YP_003104163.1 KEGG: Taf4a; TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor; K03129 transcription initiation factor TFIID subunit D3 YP_003104165.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003104166.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_4017 serine/threonine protein kinase YP_003104167.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mxa:MXAN_4017 serine/threonine protein kinase YP_003104168.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: aav:Aave_0303 transcriptional regulator, LysR family YP_003104169.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: hypothetical protein YP_003104170.1 PFAM: sporulation and cell division protein SsgA YP_003104171.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: eba:ebA6278 nitrate/nitrite response regulator YP_003104172.1 PFAM: PspC domain protein; ATP-binding region ATPase domain protein; KEGG: sus:Acid_2189 histidine kinase YP_003104173.1 PFAM: PspC domain protein; KEGG: aba:Acid345_1324 phage shock protein C, PspC YP_003104175.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_003104176.1 PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce4958 hypothetical protein YP_003104177.1 PFAM: Aldehyde Dehydrogenase; KEGG: mxa:MXAN_2844 succinate-semialdehyde dehydrogenase YP_003104178.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: scl:sce0787 hypothetical protein YP_003104180.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate YP_003104181.1 KEGG: sfu:Sfum_2122 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003104183.1 KEGG: similar to mucin 7, salivary YP_003104184.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mno:Mnod_5360 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003104185.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: smt:Smal_2340 two component transcriptional regulator, LuxR family YP_003104186.1 KEGG: hypothetical protein YP_003104187.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: mxa:MXAN_0904 B12 binding domain/transcriptional regulator, MerR family YP_003104188.1 PFAM: transcription factor WhiB YP_003104189.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: sus:Acid_6747 chaperonin GroEL YP_003104190.1 PFAM: chaperonin Cpn10; KEGG: bcu:BCAH820_0292 chaperonin, 10 kDa YP_003104192.1 KEGG: afw:Anae109_3813 metalloendopeptidase glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003104193.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: smt:Smal_0531 ribosomal-protein-alanine acetyltransferase YP_003104194.1 PFAM: peptidase M22 glycoprotease; KEGG: pzu:PHZ_c3457 metal-dependent protease (with possible chaperone activity) YP_003104195.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rpa:RPA4825 MerR family transcriptional regulator YP_003104196.1 PFAM: Thioredoxin domain; KEGG: bcy:Bcer98_3221 thioredoxin YP_003104197.1 activates fatty acids by binding to coenzyme A YP_003104199.1 PFAM: protein of unknown function UPF0079; KEGG: jan:Jann_4062 hypothetical protein YP_003104200.1 PFAM: alpha/beta hydrolase fold; KEGG: scl:sce8687 hypothetical protein YP_003104201.1 KEGG: dol:Dole_0057 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003104202.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF- family domain protein; KEGG: swi:Swit_4659 carbohydrate kinase, YjeF related protein YP_003104203.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source YP_003104204.1 KEGG: scl:sce1807 hypothetical protein YP_003104205.1 KEGG: hypothetical protein YP_003104206.1 KEGG: hypothetical protein YP_003104208.1 TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: pca:Pcar_1001 phosphohexomutase YP_003104209.1 PFAM: ribosomal protein S9; KEGG: bha:BH0169 30S ribosomal protein S9 YP_003104210.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_003104211.1 PFAM: protein of unknown function DUF909; KEGG: hypothetical protein YP_003104212.1 PFAM: protein of unknown function DUF909 YP_003104213.1 KEGG: bpl:BURPS1106A_A2538 chemotaxis histidine kinase/response regulator YP_003104214.1 PFAM: Heat shock protein 70; KEGG: mag:amb3024 chaperone protein HscA YP_003104216.1 PFAM: cell divisionFtsK/SpoIIIE; KEGG: bcz:BCZK1985 FtsK/SpoIIIE family protein YP_003104217.1 TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571; KEGG: hypothetical protein YP_003104218.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bca:BCE_2410 alkaline serine protease YP_003104219.1 KEGG: predicted gene, 100041170 YP_003104221.1 PFAM: protein of unknown function DUF690 YP_003104222.1 KEGG: GK21128 gene product from transcript GK21128- RA YP_003104224.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proprotein convertase P; proteinase inhibitor I9 subtilisin propeptide; KEGG: mca:MCA0875 serine protease YP_003104225.1 PFAM: tRNA pseudouridine synthase; KEGG: rpe:RPE_0654 tRNA pseudouridine synthase A YP_003104226.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dol:Dole_0734 ribosomal protein L17 YP_003104227.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_003104228.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_003104229.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_003104230.1 PFAM: ribosomal protein S13; KEGG: gsu:GSU2834 30S ribosomal protein S13 YP_003104231.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: aba:Acid345_1250 LSU ribosomal protein L36P YP_003104232.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bha:BH0158 translation initiation factor IF-1 YP_003104233.1 KEGG: mpo:Mpop_2819 translation initiation factor IF-2 YP_003104234.1 PFAM: protein of unknown function DUF1707 YP_003104236.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: bha:BH0156 methionine aminopeptidase YP_003104237.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; KEGG: sml:Smlt3886 adenylate kinase (fragment) YP_003104238.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase YP_003104239.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: sfu:Sfum_1574 ribosomal protein L15 YP_003104240.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: bbr:BB0049 50S ribosomal protein L30 YP_003104241.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_003104242.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: bsu:BSU01320 50S ribosomal protein L18 YP_003104243.1 PFAM: ribosomal protein L6; KEGG: cak:Caul_1629 50S ribosomal protein L6 YP_003104244.1 PFAM: ribosomal protein S8; KEGG: bha:BH0148 30S ribosomal protein S8 YP_003104245.1 PFAM: ribosomal protein S14; KEGG: cju:C8J_1598 30S ribosomal protein S14 YP_003104246.1 PFAM: ribosomal protein L5; KEGG: csa:Csal_0433 50S ribosomal protein L5 YP_003104247.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_003104248.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: bcy:Bcer98_0114 50S ribosomal protein L14 YP_003104249.1 PFAM: ribosomal protein S17; KEGG: bsu:BSU01250 30S ribosomal protein S17 YP_003104250.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: bha:BH0142 50S ribosomal protein L29 YP_003104251.1 TIGRFAM: ribosomal protein L16; PFAM: ribosomal protein L16; KEGG: bha:BH0141 50S ribosomal protein L16 YP_003104252.1 KEGG: atc:AGR_C_3546 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; ribosomal protein S3 domain; SMART: KH domain protein YP_003104253.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: bcu:BCAH820_0127 ribosomal protein L22 YP_003104254.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: bha:BH0138 30S ribosomal protein S19 YP_003104255.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_003104256.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_003104257.1 PFAM: ribosomal protein L4/L1e; KEGG: bha:BH0135 50S ribosomal protein L4 YP_003104258.1 PFAM: ribosomal protein L3; KEGG: sde:Sde_0960 50S ribosomal protein L3P YP_003104259.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_003104260.1 KEGG: ppd:Ppro_0678 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein YP_003104261.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: hac:Hac_1575 elongation factor G YP_003104262.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_003104263.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_003104264.1 KEGG: similar to pinin YP_003104267.1 PFAM: aminoglycoside phosphotransferase; KEGG: mch:Mchl_5542 aminoglycoside phosphotransferase YP_003104268.1 KEGG: tbd:Tbd_1197 hypothetical protein YP_003104269.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_003104270.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_003104271.1 KEGG: fibrocystin-L-like protein YP_003104272.1 KEGG: PF9; flagellar inner arm dynein 1 heavy chain alpha YP_003104273.1 KEGG: rce:RC1_1665 HAMP domain protein YP_003104274.1 PFAM: Mammalian cell entry related domain protein; KEGG: rce:RC1_0924 ABC transporter substrate binding protein YP_003104275.1 PFAM: Mammalian cell entry related domain protein; KEGG: gme:Gmet_1272 virulence factor MCE-like protein-related protein YP_003104276.1 PFAM: protein of unknown function DUF140; KEGG: ank:AnaeK_1997 protein of unknown function DUF140 YP_003104277.1 PFAM: protein of unknown function DUF140; KEGG: ade:Adeh_1863 ABC amino acid transporter, inner membrane subunit YP_003104278.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component YP_003104279.1 TIGRFAM: ribosomal protein L7/L12; PFAM: ribosomal protein L7/L12; KEGG: bha:BH0122 50S ribosomal protein L7/L12 YP_003104280.1 PFAM: ribosomal protein L10; KEGG: gox:GOX0388 50S ribosomal protein L10P YP_003104281.1 KEGG: rpa:RPA0213 OmpA family protein YP_003104282.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_003104283.1 binds directly to 23S ribosomal RNA YP_003104284.1 KEGG: bha:BH0118 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein YP_003104285.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: sfu:Sfum_1543 preprotein translocase, SecE subunit YP_003104286.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_003104287.1 KEGG: xom:XOO_0364 hypothetical protein YP_003104289.1 PFAM: MaoC domain protein dehydratase; KEGG: dal:Dalk_1161 MaoC domain protein dehydratase YP_003104290.1 KEGG: rpt:Rpal_3723 hypothetical protein YP_003104291.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: ribosomal protein L33; K02913 large subunit ribosomal protein L33 YP_003104292.1 KEGG: xac:XAC2711 phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein YP_003104293.1 KEGG: bpm:BURPS1710b_A0674 hypothetical protein YP_003104295.1 KEGG: sml:Smlt3065 hypothetical protein YP_003104296.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription YP_003104297.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: pcr:Pcryo_0625 glucose-1-phosphate thymidylyltransferase YP_003104298.1 PFAM: peptidase M48 Ste24p; KEGG: bxe:Bxe_A4413 heat shock protein HtpX YP_003104299.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ank:AnaeK_1272 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_003104300.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: mrd:Mrad2831_2058 NADH (or F420H2) dehydrogenase, subunit C YP_003104301.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: gbm:Gbem_3925 NADH-quinone oxidoreductase, B subunit YP_003104302.1 PFAM: regulatory protein LysR; KEGG: rpb:RPB_4498 hypothetical protein YP_003104304.1 PFAM: amidinotransferase; KEGG: aeh:Mlg_0130 amidinotransferase YP_003104305.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bvi:Bcep1808_5003 AsnC family transcriptional regulator YP_003104306.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_003104307.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: eba:ebA3149 2-oxoglutarate ferredoxin oxidoreductase alpha subunit YP_003104308.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: eba:ebA3150 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_003104309.1 KEGG: hypothetical protein YP_003104310.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: cvi:CV_0304 RarD protein, chloamphenicol sensitive YP_003104311.1 PFAM: polyprenyl synthetase; KEGG: sit:TM1040_3742 farnesyltranstransferase YP_003104312.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104313.1 KEGG: mgm:Mmc1_3623 proton-translocating NADH- quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_003104314.1 Catalyzes the transfer of electrons from NADH to ubiquinone YP_003104315.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104316.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104317.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104318.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104319.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104320.1 KEGG: sme:SMa1525 NuoF2 NADH I chain F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_003104321.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mag:amb2783 NADH:ubiquinone oxidoreductase 24 kD subunit YP_003104322.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104323.1 Catalyzes the transfer of electrons from NADH to quinone YP_003104324.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_003104325.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: glo:Glov_3138 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_003104326.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Lycopene beta and epsilon cyclase; KEGG: pna:Pnap_1343 geranylgeranyl reductase YP_003104327.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; methyltransferase type 11; methyltransferase type 12; KEGG: sgl:SG0109 ubiquinone/menaquinone biosynthesis methyltransferase YP_003104328.1 PFAM: inositol monophosphatase; KEGG: ade:Adeh_3387 inositol-1(or 4)- monophosphatase YP_003104330.1 KEGG: predicted protein YP_003104331.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: azo:azo0308 phenylacetic acid degradation NADH oxidoreductase PaaE YP_003104332.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: mno:Mnod_7196 phenylacetate-CoA oxygenase, PaaJ subunit YP_003104333.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rpd:RPD_1826 phenylacetate-CoA oxygenase, PaaI subunit YP_003104334.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: pde:Pden_4809 phenylacetate-CoA oxygenase, PaaH subunit YP_003104335.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA YP_003104337.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: scl:sce5042 hypothetical protein YP_003104338.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: dol:Dole_0265 ADP-ribosylation/crystallin J1 YP_003104339.1 PFAM: pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sbp:Sbal223_2267 pyridoxal-5'-phosphate- dependent protein beta subunit YP_003104341.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate YP_003104342.1 KEGG: GD17417 gene product from transcript GD17417- RA YP_003104343.1 KEGG: dar:Daro_2822 AMP-dependent synthetase and ligase YP_003104344.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: scl:sce5310 naphthoate synthase YP_003104345.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase; KEGG: bcy:Bcer98_3493 2-succinyl-6-hydroxy-2,4- cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YP_003104346.1 PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: sus:Acid_2560 peptidase M1, membrane alanine aminopeptidase YP_003104348.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: xca:xccb100_3044 transcriptional regulator YP_003104349.1 PFAM: protein of unknown function DUF397 YP_003104351.1 PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: scl:sce5626 leucine responsive regulatory protein YP_003104352.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: cps:CPS_1619 DNA-binding response regulator YP_003104354.1 KEGG: GG20667 gene product from transcript GG20667- RA YP_003104355.1 TIGRFAM: cytochrome C-type biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: pca:Pcar_3065 cytochrome C biogenesis protein YP_003104356.1 PFAM: ResB family protein; KEGG: cvi:CV_4387 cytochrome C-type biogenesis protein YP_003104357.1 PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: rpd:RPD_4260 cytochrome C biogenesis protein, transmembrane region YP_003104358.1 KEGG: hch:HCH_01837 fibronectin type III domain- containing protein YP_003104359.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: mlo:mll2594 quinone oxidoreductase YP_003104360.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sfr:Sfri_1234 redoxin domain protein YP_003104361.1 PFAM: phosphoglycerate mutase; KEGG: afr:AFE_0621 phosphoglycerate mutase family protein YP_003104362.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; aminotransferase class I and II; KEGG: bbr:BB4409 glutamate-1-semialdehyde 2,1- aminomutase YP_003104363.1 KEGG: Hypothetical protein CBG04716 YP_003104365.1 KEGG: hypothetical protein YP_003104367.1 KEGG: hypothetical protein YP_003104368.1 KEGG: scl:sce6476 hypothetical protein YP_003104370.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_003104371.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrinogen III synthase HEM4; KEGG: sfu:Sfum_3201 uroporphyrin-III C- methyltransferase YP_003104372.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis YP_003104373.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins YP_003104374.1 modulates transcription in response to the NADH/NAD(+) redox state YP_003104375.1 PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: rpe:RPE_0476 beta-Ig-H3/fasciclin YP_003104376.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sme:SMa2103 oxidoreductase YP_003104377.1 PFAM: glutaredoxin 2; KEGG: bpy:Bphyt_2902 glutaredoxin 2 YP_003104378.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mno:Mnod_7251 AMP-dependent synthetase and ligase YP_003104379.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: aba:Acid345_3132 sigma-24, ECF subfamily YP_003104380.1 KEGG: ank:AnaeK_2468 hypothetical protein YP_003104381.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: pag:PLES_41761 phosphoserine phosphatase YP_003104382.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: dal:Dalk_1813 phospholipid/glycerol acyltransferase YP_003104383.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: dal:Dalk_1814 NAD-dependent epimerase/dehydratase YP_003104384.1 PFAM: Protein of unknown function DUF1713 YP_003104385.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: afw:Anae109_1068 DNA binding domain- containing protein YP_003104386.1 KEGG: mgm:Mmc1_3656 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; ketopantoate reductase ApbA/PanE domain protein YP_003104387.1 PFAM: thioesterase superfamily protein; KEGG: dal:Dalk_1857 hypothetical protein YP_003104388.1 PFAM: proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase YP_003104389.1 PFAM: xylose isomerase; KEGG: gbm:Gbem_1512 xylose isomerase domain protein TIM barrel YP_003104390.1 KEGG: hypothetical protein YP_003104391.1 PFAM: Ppx/GppA phosphatase; KEGG: afw:Anae109_0702 Ppx/GppA phosphatase YP_003104392.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcb:BCB4264_A5589 DNA-binding response regulator YycF YP_003104393.1 KEGG: glo:Glov_0589 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003104394.1 PFAM: aldo/keto reductase; KEGG: reu:Reut_A0010 oxidoreductase YP_003104395.1 KEGG: maq:Maqu_0164 response regulator receiver protein YP_003104396.1 KEGG: YALI0B02728p; K01834 phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: phosphoglycerate mutase YP_003104397.1 PFAM: AMP-dependent synthetase and ligase; KEGG: dsh:Dshi_0253 AMP-dependent synthetase and ligase YP_003104398.1 KEGG: scl:sce1077 hypothetical protein YP_003104400.1 TIGRFAM: UDP-N-acetylglucosamine; PFAM: glycosyl transferase group 1; KEGG: azo:azo1809 glycosyltransferase YP_003104401.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mca:MCA1018 ErfK/YbiS/YcfS/YnhG family protein YP_003104402.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: scl:sce8093 oxidoreductase YP_003104403.1 KEGG: noc:Noc_1844 hypothetical protein YP_003104404.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; KEGG: scl:sce7823 UDP-N-acetylmuramate dehydrogenase YP_003104405.1 KEGG: hch:HCH_06841 hypothetical protein YP_003104406.1 KEGG: mxa:MXAN_2356 hypothetical protein YP_003104407.1 PFAM: protein of unknown function DUF1503 YP_003104408.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine YP_003104409.1 KEGG: mxa:MXAN_2885 hypothetical protein YP_003104410.1 PFAM: regulatory protein TetR; KEGG: bsu:BSU17080 transcriptional regulator YP_003104411.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: bbr:BB1555 hypothetical protein YP_003104412.1 PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ccs:CCNA_00730 transcriptional regulator SkgA YP_003104413.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: psa:PST_4009 protease PfpI YP_003104414.1 KEGG: sal:Sala_0890 flavin reductase-like, FMN- binding YP_003104416.1 KEGG: hypothetical protein; K03497 chromosome partitioning protein, ParB family YP_003104417.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: azc:AZC_2073 XRE family-like protein YP_003104418.1 PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase; KEGG: mex:Mext_4262 protein-L-isoaspartate O- methyltransferase YP_003104419.1 PFAM: protein of unknown function DUF445; KEGG: swi:Swit_4743 hypothetical protein YP_003104420.1 PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mxa:MXAN_3751 aminotransferase, classes I and II YP_003104421.1 KEGG: pag:PLES_38291 hypothetical protein YP_003104422.1 KEGG: scl:sce4225 hypothetical protein YP_003104423.1 PFAM: protein of unknown function DUF1470; KEGG: sme:SMc00597 hypothetical protein YP_003104424.1 PFAM: transcriptional regulator PadR family protein; KEGG: nar:Saro_2546 PadR family transcriptional regulator YP_003104425.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: tgr:Tgr7_1366 lipoprotein releasing system, ATP-binding protein YP_003104426.1 PFAM: protein of unknown function DUF214; KEGG: mpt:Mpe_A2047 ABC transporter, permease protein YP_003104428.1 PFAM: protein of unknown function DUF214; KEGG: ank:AnaeK_1836 protein of unknown function DUF214 YP_003104429.1 PFAM: protein of unknown function DUF214; KEGG: rru:Rru_A3653 hypothetical protein YP_003104430.1 KEGG: acp:A2cp1_2390 transcriptional regulator, Fis family YP_003104431.1 KEGG: proteophosphoglycan 5 YP_003104432.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: pzu:PHZ_c3113 transcriptional regulator, GntR family YP_003104433.1 PFAM: protein of unknown function DUF161; KEGG: pzu:PHZ_c3114 hypothetical protein YP_003104434.1 PFAM: Clp domain protein; KEGG: ATP-dependent clp protease ATP-binding subunit YP_003104436.1 KEGG: pap:PSPA7_0575 hypothetical protein YP_003104438.1 KEGG: similar to corin YP_003104439.1 PFAM: Heavy metal transport/detoxification protein; KEGG: dvm:DvMF_3169 heavy metal transport/detoxification protein YP_003104440.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bsu:BSU33500 hypothetical protein YP_003104442.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mpt:Mpe_A2202 cold-shock DNA-binding protein family protein YP_003104443.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bsu:BSU27440 glutamine ABC transporter (glutamine-binding protein) YP_003104444.1 KEGG: psa:PST_3300 hypothetical protein YP_003104445.1 KEGG: Os02g0467200; hypothetical protein YP_003104446.1 KEGG: scl:sce5242 hypothetical protein YP_003104447.1 KEGG: mxa:MXAN_3571 hypothetical protein YP_003104448.1 KEGG: maq:Maqu_3701 hypothetical protein YP_003104449.1 PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bac:BamMC406_6306 alcohol dehydrogenase YP_003104450.1 KEGG: spe:Spro_1171 hypothetical protein YP_003104451.1 PFAM: regulatory protein TetR; KEGG: mes:Meso_3334 transcriptional regulator, TetR family YP_003104453.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: hypothetical protein YP_003104455.1 KEGG: rfr:Rfer_4028 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003104456.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: SL44-1; basic proline-rich protein YP_003104457.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: swi:Swit_3576 phosphate uptake regulator, PhoU YP_003104459.1 KEGG: predicted gene, 100041170 YP_003104460.1 KEGG: gur:Gura_2561 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_003104461.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tbd:Tbd_1138 phosphate transport system permease protein 2 YP_003104462.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_2857 phosphate ABC transporter, inner membrane subunit PstC YP_003104463.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: scl:sce2946 phosphate ABC transporter, substrate-binding protein PstS YP_003104464.1 TIGRFAM: mycothiol biosynthesis acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: predicted protein YP_003104465.1 PFAM: transcriptional regulator domain protein; KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation YP_003104466.1 KEGG: bha:BH1308 hypothetical protein YP_003104467.1 KEGG: mxa:MXAN_7418 hypothetical protein YP_003104468.1 KEGG: ank:AnaeK_1735 cytochrome C biogenesis protein transmembrane region YP_003104469.1 KEGG: tdn:Suden_0151 CDP-alcohol phosphatidyltransferase YP_003104470.1 PFAM: rhodanese domain protein; SMART: rhodanese domain protein; KEGG: cja:CJA_2345 rhodanese-like domain protein YP_003104471.1 KEGG: mxa:MXAN_0146 hypothetical protein YP_003104473.1 PFAM: Domain of unknown function DUF1794; KEGG: hypothetical protein YP_003104474.1 PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: aav:Aave_3511 allophanate hydrolase subunit 2 YP_003104476.1 KEGG: aav:Aave_3511 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_003104477.1 PFAM: aminotransferase class IV; KEGG: bbr:BB0169 class IV aminotransferase YP_003104478.1 PFAM: ferric-uptake regulator; KEGG: ank:AnaeK_2300 ferric uptake regulator, Fur family YP_003104479.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: mxa:MXAN_6341 glycine cleavage system T protein YP_003104480.1 PFAM: protein of unknown function DUF849; KEGG: rfr:Rfer_3885 hypothetical protein YP_003104482.1 PFAM: major facilitator superfamily MFS_1; KEGG: aav:Aave_4589 major facilitator superfamily MFS_1 YP_003104483.1 KEGG: bch:Bcen2424_1641 amino acid adenylation domain-containing protein YP_003104485.1 KEGG: bpm:BURPS1710b_2246 hypothetical protein YP_003104486.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: dal:Dalk_5197 transcriptional regulator, Crp/Fnr family YP_003104488.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bid:Bind_2834 thiamine pyrophosphate protein central region YP_003104489.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: sus:Acid_1480 myo-inositol catabolism IolB domain-containing protein YP_003104490.1 PFAM: PfkB domain protein; KEGG: sus:Acid_1481 ribokinase-like domain- containing protein YP_003104491.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bcs:BCAN_A1367 hypothetical protein YP_003104492.1 PFAM: inner-membrane translocator; KEGG: acr:Acry_2317 inner-membrane translocator YP_003104493.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: acr:Acry_2318 ABC-type sugar transport system periplasmic component-like protein YP_003104494.1 PFAM: xylose isomerase; KEGG: sit:TM1040_3346 xylose isomerase-like TIM barrel YP_003104495.1 PFAM: oxidoreductase domain protein; oxidoreductase domain; KEGG: bbt:BBta_0488 inositol 2-dehydrogenase YP_003104496.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: pmr:PMI0088 ribose operon repressor (LacI- family transcriptional regulator) YP_003104497.1 PFAM: Class I peptide chain release factor; KEGG: rpi:Rpic_3102 class I peptide chain release factor YP_003104498.1 KEGG: hypothetical protein YP_003104499.1 SMART: helix-turn-helix domain protein YP_003104500.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_003104501.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_003104502.1 PFAM: protein of unknown function DUF1503 YP_003104504.1 PFAM: protein of unknown function DUF1023; KEGG: xca:xccb100_3697 outer membrane adhesin YP_003104509.1 KEGG: hypothetical protein YP_003104512.1 PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: scl:sce1528 glucose 1-dehydrogenase YP_003104513.1 KEGG: gsu:GSU0474 sensory box/GGDEF family protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003104514.1 KEGG: predicted protein YP_003104515.1 KEGG: N,O-diacetylmuramidase; PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25 YP_003104516.1 KEGG: N,O-diacetyl muramidase; K01238; PFAM: glycoside hydrolase family 25; SMART: glycoside hydrolase family 25 YP_003104517.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_003104518.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: afw:Anae109_3954 phosphoribosylformylglycinamidine synthase I YP_003104519.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: eli:ELI_02445 phosphoribosylformylglycinamidine synthase small subunit YP_003104521.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: bja:blr6721 reductase YP_003104522.1 PFAM: beta-lactamase domain protein; KEGG: acr:Acry_1778 hydroxyacylglutathione hydrolase YP_003104523.1 KEGG: eba:ebA6939 hypothetical protein YP_003104524.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_003104525.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rde:RD1_2182 amino acid ABC transporter, periplasmic-binding protein YP_003104526.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2183 glutamine ABC transporter, permease protein YP_003104527.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: mes:Meso_3147 ABC transporter YP_003104528.1 KEGG: similar to C25F9.2 YP_003104529.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide YP_003104531.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: sus:Acid_7940 ECF subfamily RNA polymerase sigma-24 factor YP_003104532.1 PFAM: regulatory protein TetR; KEGG: scl:sce1385 TetR family transcriptional regulator YP_003104533.1 KEGG: GK23094 gene product from transcript GK23094- RA YP_003104534.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: pca:Pcar_3124 RNA polymerase, sigma-E factor YP_003104535.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mxa:MXAN_1432 L-allo-threonine aldolase YP_003104536.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aba:Acid345_0142 HAD-superfamily hydrolase subfamily IA, variant 3 YP_003104538.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate YP_003104540.1 KEGG: ret:RHE_PE00455 sulfite reductase, beta subunit (hemoprotein) protein YP_003104541.1 KEGG: Os03g0309300; hypothetical protein YP_003104544.1 KEGG: ccs:CCNA_00299 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_003104545.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bpt:Bpet4159 hypothetical protein YP_003104546.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Citrate transporter; KEGG: bpt:Bpet4158 hypothetical protein YP_003104547.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rce:RC1_0289 glycerophosphoryl diester phosphodiesterase YP_003104548.1 PFAM: luciferase-like monooxygenase; KEGG: alkanesulfonate monooxygenase YP_003104549.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis YP_003104551.1 KEGG: hypothetical protein YP_003104553.1 PFAM: glycoside hydrolase family 16; KEGG: hch:HCH_06576 hypothetical protein YP_003104554.1 KEGG: son:SO_3323 acetyltransferase YP_003104555.1 KEGG: dac:Daci_3973 hypothetical protein YP_003104558.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate YP_003104559.1 PFAM: protein of unknown function DUF427; KEGG: pnu:Pnuc_1659 hypothetical protein YP_003104560.1 PFAM: aldo/keto reductase; KEGG: ank:AnaeK_0485 aldo/keto reductase YP_003104561.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bch:Bcen2424_6846 short-chain dehydrogenase/reductase SDR YP_003104562.1 PFAM: YCII-related; KEGG: reu:Reut_B5221 YCII-related YP_003104563.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_2500 RNA polymerase sigma-70 factor, ECF subfamily YP_003104564.1 PFAM: ROK family protein; KEGG: scl:sce7667 ROK family transcriptional regulator YP_003104565.1 KEGG: smt:Smal_3421 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_003104566.1 KEGG: hypothetical protein YP_003104567.1 PFAM: hypothetical protein; KEGG: pfo:Pfl01_4994 hypothetical protein YP_003104568.1 PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 glycolate oxidase YP_003104569.1 PFAM: hypothetical protein; KEGG: plu:plu3172 hypothetical protein YP_003104570.1 KEGG: dac:Daci_0781 hypothetical protein YP_003104571.1 PFAM: PfkB domain protein; KEGG: sfu:Sfum_3386 PfkB domain protein YP_003104572.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: acr:Acry_0501 periplasmic binding protein/LacI transcriptional regulator YP_003104573.1 PFAM: glycoside hydrolase family 76; KEGG: hypothetical protein YP_003104574.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: azo:azo1893 RNA methyltransferase YP_003104575.1 KEGG: eba:ebB138 hypothetical protein YP_003104577.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_003104582.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: azc:AZC_1379 short-chain dehydrogenase YP_003104584.1 KEGG: ank:AnaeK_0413 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: ATPase AAA YP_003104585.1 KEGG: rle:RL3033 hypothetical protein YP_003104586.1 PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; globin; KEGG: afr:AFE_0860 iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding YP_003104587.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: cjj:CJJ81176_1244 MerR family transcriptional regulator YP_003104588.1 KEGG: pag:PLES_51451 DnaJ protein; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein YP_003104589.1 PFAM: GrpE protein; KEGG: dvm:DvMF_1194 GrpE protein YP_003104590.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria YP_003104591.1 KEGG: aba:Acid345_3530 hypothetical protein YP_003104593.1 PFAM: small multidrug resistance protein; KEGG: oan:Oant_2259 small multidrug resistance protein YP_003104594.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_0008 hypothetical protein YP_003104595.1 PFAM: membrane protein of unknown function; KEGG: bmv:BMASAVP1_A3416 hypothetical protein YP_003104596.1 KEGG: dsh:Dshi_3592 Cna B domain-containing protein YP_003104597.1 KEGG: gme:Gmet_2043 hypothetical protein YP_003104598.1 KEGG: gme:Gmet_2043 hypothetical protein YP_003104599.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: dsh:Dshi_3592 Cna B domain-containing protein YP_003104600.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_003104601.1 KEGG: similar to involucrin repeat protein YP_003104602.1 PFAM: Na+/solute symporter; KEGG: vsp:VS_1257 sodium/glucose cotransporter YP_003104603.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; KEGG: xcv:XCV2187 two-component system LuxR family regulatory protein YP_003104604.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mxa:MXAN_0422 acyl-CoA dehydrogenase YP_003104605.1 PFAM: protein of unknown function DUF1206; KEGG: afw:Anae109_1905 hypothetical protein YP_003104606.1 PFAM: VanW family protein; KEGG: bcb:BCB4264_A0642 vancomycin B-type resistance protein VanW YP_003104607.1 PFAM: chaperonin Cpn10; KEGG: noc:Noc_2922 co-chaperonin GroES YP_003104608.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; NHL repeat containing protein; Redoxin domain protein; KEGG: haloacid dehalogenase-like hydrolase family protein YP_003104611.1 PFAM: protein of unknown function DUF541; KEGG: bra:BRADO0381 hypothetical protein YP_003104612.1 PFAM: OmpA/MotB domain protein; KEGG: dsh:Dshi_3025 OmpA/MotB domain-containing protein YP_003104613.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_003104614.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_003104615.1 PFAM: MaoC domain protein dehydratase; KEGG: abo:ABO_1719 MaoC like domain-containing protein YP_003104616.1 PFAM: acyl-CoA dehydrogenase domain protein; acyl- CoA dehydrogenase type 2 domain; KEGG: afw:Anae109_2163 acyl-CoA dehydrogenase domain-containing protein YP_003104617.1 KEGG: hsdl2; Hydroxysteroid dehydrogenase-like protein 2 YP_003104618.1 PFAM: regulatory protein TetR; KEGG: bav:BAV3196 TetR-family trasncriptional regulator YP_003104619.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sal:Sala_2443 MerR family transcriptional regulator YP_003104620.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: bha:BH2653 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_003104621.1 PFAM: transketolase; transketolase; KEGG: afw:Anae109_1994 transketolase YP_003104622.1 KEGG: gme:Gmet_2509 dehydrogenase, E1 component; TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003104623.1 PFAM: peptidase M20; peptidase dimerization domain protein; KEGG: xca:xccb100_1378 hypothetical protein YP_003104624.1 KEGG: sus:Acid_7132 hypothetical protein YP_003104625.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: acr:Acry_0683 extracellular solute-binding protein YP_003104626.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: acr:Acry_0684 polar amino acid ABC transporter, inner membrane subunit YP_003104627.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: acr:Acry_0685 ABC transporter YP_003104628.1 KEGG: rce:RC1_0389 hypothetical protein YP_003104629.1 KEGG: Os02g0127100; hypothetical protein YP_003104631.1 KEGG: mxa:MXAN_1088 serine-threonine protein kinase YP_003104632.1 KEGG: GL23092 gene product from transcript GL23092- RA YP_003104633.1 catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP YP_003104634.1 KEGG: hypothetical protein YP_003104635.1 KEGG: pap:PSPA7_0052 hypothetical protein YP_003104636.1 PFAM: regulatory protein GntR HTH; GntR family transcriptional regulator; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_A2447 GntR family transcriptional regulator YP_003104637.1 KEGG: bur:Bcep18194_A5681 hypothetical protein YP_003104638.1 PFAM: Na+/solute symporter; KEGG: bvi:Bcep1808_2427 Na+/solute symporter YP_003104639.1 PFAM: ROK family protein; KEGG: mlo:mlr7234 glucose kinase YP_003104640.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_003104641.1 PFAM: protein of unknown function DUF397 YP_003104642.1 PFAM: GTP-binding protein HSR1-related; KEGG: mca:MCA1193 hypothetical protein YP_003104643.1 KEGG: mno:Mnod_1146 GrpE protein YP_003104644.1 KEGG: cha:CHAB381_0860 GTP-binding protein YP_003104645.1 KEGG: Sfrs15; splicing factor, arginine/serine-rich 15 YP_003104646.1 PFAM: histidine kinase dimerization and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003104647.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: scl:sce5431 two-component system response regulator YP_003104648.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mxa:MXAN_3578 short chain dehydrogenase YP_003104649.1 PFAM: regulatory protein TetR; KEGG: eum:ECUMN_4825 regulator of macrolide 2'- phosphotransferase I YP_003104650.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; KEGG: mno:Mnod_7133 Cof-like hydrolase YP_003104651.1 KEGG: hypothetical protein YP_003104652.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerization and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: scl:sce5432 two-component system sensor kinase YP_003104654.1 KEGG: tgr:Tgr7_3237 tRNA (guanine-N(7)-)- methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_003104656.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: hypothetical protein YP_003104657.1 KEGG: esa:ESA_01546 hypothetical protein YP_003104658.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bha:BH0445 ABC transporter ATP-binding protein YP_003104660.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bja:blr4240 hypothetical protein YP_003104662.1 PFAM: amidohydrolase; adenosine/AMP deaminase; Amidohydrolase 3; KEGG: tmz:Tmz1t_1721 amidohydrolase YP_003104663.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rce:RC1_3985 oxidoreductase, short chain dehydrogenase YP_003104664.1 PFAM: protein of unknown function DUF839; KEGG: mes:Meso_0954 twin-arginine translocation pathway signal YP_003104665.1 PFAM: protein of unknown function DUF839; KEGG: noc:Noc_2144 hypothetical protein YP_003104666.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_3634 major facilitator transporter YP_003104667.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: vei:Veis_2048 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_003104668.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pna:Pnap_2712 short-chain dehydrogenase/reductase SDR YP_003104669.1 TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: sme:SM_b20249 myo-inositol-1- phosphate synthase YP_003104670.1 PFAM: transcriptional regulator PadR family protein; KEGG: dal:Dalk_2104 transcriptional regulator, PadR- like family YP_003104672.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: bsu:BSU37510 hypothetical protein YP_003104673.1 KEGG: ade:Adeh_0166 integral membrane protein-like YP_003104674.1 KEGG: afw:Anae109_0175 integral membrane protein- like protein YP_003104675.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues YP_003104676.1 KEGG: Taf4a; TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor; K03129 transcription initiation factor TFIID subunit D3 YP_003104677.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: bcy:Bcer98_4014 30S ribosomal protein S6 YP_003104678.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bsu:BSU40900 single-strand DNA-binding protein YP_003104679.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_003104680.1 TIGRFAM: ribosomal protein L9; PFAM: ribosomal protein L9; KEGG: bcb:BCB4264_A5596 ribosomal protein L9 YP_003104681.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: bcm:Bcenmc03_1893 DnaB domain-containing protein YP_003104682.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rru:Rru_A2907 anti-sigma-factor antagonist domain-containing protein YP_003104683.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nar:Saro_2963 short-chain dehydrogenase/reductase SDR YP_003104684.1 SMART: helix-turn-helix domain protein; KEGG: acr:Acry_0313 XRE family transcriptional regulator YP_003104685.1 PFAM: exonuclease RNase T and DNA polymerase III; SMART: exonuclease; KEGG: rme:Rmet_3922 DNA polymerase III, epsilon subunit YP_003104686.1 KEGG: pen:PSEEN1648 sensory box/GGDEF domain/EAL domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003104687.1 KEGG: bch:Bcen2424_6767 outer membrane autotransporter YP_003104688.1 KEGG: GK21216 gene product from transcript GK21216- RA YP_003104689.1 KEGG: rce:RC1_0389 hypothetical protein YP_003104690.1 PFAM: protein of unknown function UPF0118; KEGG: mxa:MXAN_7270 hypothetical protein YP_003104691.1 KEGG: pca:Pcar_1107 two component signal transduction response regulator; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003104692.1 PFAM: ATP-binding region ATPase domain protein; KEGG: bpl:BURPS1106A_1352 membrane sensor histidine kinase YP_003104693.1 PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: reh:H16_B2334 response regulator, NarL-family YP_003104698.1 PFAM: protein of unknown function DUF1707; KEGG: swp:swp_3997 hypothetical protein YP_003104699.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4- dehydrorhamnose reductase; KEGG: dvl:Dvul_2879 NAD-dependent epimerase/dehydratase YP_003104700.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism YP_003104701.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine YP_003104702.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pmy:Pmen_4546 LysR family transcriptional regulator YP_003104704.1 KEGG: sfu:Sfum_3180 hypothetical protein YP_003104706.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: scl:sce2489 fructose-specific MTP YP_003104707.1 PFAM: PfkB domain protein; KEGG: bmj:BMULJ_01615 ribokinase YP_003104708.1 KEGG: mpo:Mpop_4712 hypothetical protein YP_003104709.1 PFAM: MMPL domain protein; KEGG: bcr:BCAH187_A1444 transporter YP_003104710.1 PFAM: regulatory protein TetR; KEGG: mes:Meso_0701 transcriptional regulator, TetR family YP_003104711.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase YP_003104712.1 KEGG: hypothetical protein YP_003104713.1 PFAM: protein of unknown function DUF179; KEGG: aeh:Mlg_0349 hypothetical protein YP_003104714.1 PFAM: major facilitator superfamily MFS_1; KEGG: bav:BAV0769 transporter YP_003104715.1 KEGG: hypothetical protein; TIGRFAM: tRNA adenylyltransferase; metal dependent phophohydrolase; PFAM: polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003104716.1 PFAM: NUDIX hydrolase; KEGG: mxa:MXAN_4891 hydrolase, NUDIX family YP_003104717.1 KEGG: ccs:CCNA_00415 hypothetical protein YP_003104718.1 PFAM: virulence factor MVIN family protein; KEGG: glo:Glov_2048 integral membrane protein MviN YP_003104719.1 KEGG: azo:azo3774 serine/threonine protein kinase YP_003104720.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sus:Acid_7940 ECF subfamily RNA polymerase sigma-24 factor YP_003104721.1 KEGG: mno:Mnod_6604 hypothetical protein YP_003104722.1 KEGG: acp:A2cp1_4094 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003104723.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: gdi:GDI0716 thioredoxin YP_003104724.1 PFAM: cell wall hydrolase/autolysin; peptidoglycan- binding domain 1 protein; SMART: cell wall hydrolase/autolysin; KEGG: bha:BH3665 N-acetylmuramoyl-L-alanine amidase (major autolysin) YP_003104726.1 PFAM: aminotransferase class I and II; KEGG: mxa:MXAN_0212 aminotransferase, class I and II family protein YP_003104727.1 PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; KEGG: afw:Anae109_3887 D-alanine--D-alanine ligase YP_003104728.1 KEGG: acp:A2cp1_4509 ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003104729.1 PFAM: cobyrinic acid ac-diamide synthase; KEGG: bsu:BSU40970 chromosome partitioning protein; transcriptional regulator YP_003104730.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: cak:Caul_5025 methyltransferase GidB YP_003104731.1 PFAM: NUDIX hydrolase; KEGG: bcr:BCAH187_A2810 MutT/NUDIX family protein YP_003104732.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: bha:BH4063 spoIIIJ-associated protein YP_003104733.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mmw:Mmwyl1_4485 60 kDa inner membrane insertion protein YP_003104734.1 PFAM: protein of unknown function DUF37; KEGG: ade:Adeh_4359 hypothetical protein YP_003104735.1 PFAM: ribonuclease P protein; KEGG: sal:Sala_0006 ribonuclease P protein component YP_003104736.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: aba:Acid345_0220 LSU ribosomal protein L34P