-- dump date 20140618_190532 -- class Genbank::CDS -- table cds_note -- id note YP_006287972.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_006287973.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_006287974.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_006287975.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_006287976.1 PFAM: Cytochrome b562 YP_006287977.1 PFAM: SNARE associated Golgi protein YP_006287978.1 PFAM: ABC transporter YP_006287982.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein YP_006287984.1 PFAM: Uncharacterised protein family (UPF0075) YP_006287985.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_006287986.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006287988.1 PFAM: Sodium:neurotransmitter symporter family YP_006287990.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB YP_006287991.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_006287992.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006287994.1 PFAM: Sulfite exporter TauE/SafE YP_006287995.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_006287996.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_006287997.1 PFAM: Phosphoenolpyruvate carboxylase YP_006287998.1 PFAM: Bacterial regulatory proteins, tetR family YP_006287999.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006288000.1 PFAM: AcrB/AcrD/AcrF family YP_006288002.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_006288004.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_006288005.1 PFAM: START domain YP_006288006.1 PFAM: Major Facilitator Superfamily YP_006288007.1 PFAM: Aldo/keto reductase family YP_006288008.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006288010.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006288011.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006288012.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I YP_006288014.1 PFAM: Peptidase family M23 YP_006288015.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: A/G-specific adenine glycosylase YP_006288016.1 PFAM: HIT domain YP_006288017.1 PFAM: Dienelactone hydrolase family YP_006288018.1 PFAM: Protein of unknown function (DUF1328) YP_006288019.1 PFAM: Uncharacterised protein family (UPF0153) YP_006288020.1 PFAM: Glucose / Sorbosone dehydrogenase YP_006288021.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA) YP_006288022.1 PFAM: Formate/nitrite transporter YP_006288024.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_006288026.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_006288027.1 PFAM: Isochorismatase family YP_006288028.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter YP_006288029.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006288030.1 PFAM: Protein of unknown function (DUF523) YP_006288031.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase YP_006288032.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006288033.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_006288034.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain; TIGRFAM: maleylacetoacetate isomerase YP_006288035.1 PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase YP_006288036.1 PFAM: Amino acid permease YP_006288037.1 PFAM: Peptidase M15 YP_006288038.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain YP_006288039.1 PFAM: Acyltransferase family YP_006288040.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: histidine utilization repressor, proteobacterial YP_006288041.1 PFAM: HutD YP_006288042.1 PFAM: Urocanase; TIGRFAM: urocanate hydratase YP_006288043.1 PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase YP_006288044.1 PFAM: Amino acid permease YP_006288045.1 PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase YP_006288046.1 PFAM: Arginase family; TIGRFAM: formimidoylglutamase YP_006288047.1 PFAM: Bacterial protein of unknown function (DUF885) YP_006288048.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_006288049.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_006288050.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_006288051.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_006288052.1 PFAM: Phosphatidylglycerophosphatase A YP_006288053.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase YP_006288054.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_006288055.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_006288056.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006288058.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB YP_006288061.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_006288062.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase YP_006288063.1 PFAM: Rhodanese-like domain YP_006288064.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor YP_006288065.1 PFAM: Acetamidase/Formamidase family YP_006288068.1 PFAM: Secretory lipase YP_006288069.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); TIGRFAM: phosphate regulon sensor kinase PhoR YP_006288070.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_006288072.1 PFAM: short chain dehydrogenase YP_006288073.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006288074.1 PFAM: Aminotransferase class I and II YP_006288075.1 PFAM: Protein of unknown function (DUF445) YP_006288077.1 PFAM: Bacterial protein of unknown function (DUF924) YP_006288078.1 PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase YP_006288079.1 PFAM: Disulfide bond formation protein DsbB YP_006288080.1 PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein YP_006288081.1 PFAM: LysM domain YP_006288082.1 PFAM: Peptidase family M23 YP_006288084.1 PFAM: PGAP1-like protein YP_006288085.1 PFAM: Uncharacterised protein family (UPF0227) YP_006288086.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial YP_006288087.1 PFAM: short chain dehydrogenase YP_006288088.1 PFAM: Ureidoglycolate hydrolase YP_006288089.1 PFAM: Allantoicase repeat; TIGRFAM: allantoicase YP_006288090.1 PFAM: FAD binding domain YP_006288091.1 PFAM: Nucleoside-specific channel-forming protein, Tsx YP_006288092.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_006288093.1 PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase YP_006288094.1 PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase YP_006288095.1 PFAM: Polysaccharide deacetylase; TIGRFAM: putative urate catabolism protein YP_006288096.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein YP_006288099.1 PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region YP_006288100.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006288101.1 PFAM: alpha/beta hydrolase fold YP_006288102.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_006288103.1 PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family YP_006288104.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth) YP_006288105.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase YP_006288106.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006288107.1 PFAM: Domain of unknown function (DUF1737) YP_006288108.1 PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic YP_006288109.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_006288110.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_006288111.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_006288112.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_006288113.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_006288114.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_006288115.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_006288117.1 PFAM: Peptidase family M23 YP_006288118.1 PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type YP_006288119.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_006288121.1 PFAM: Uncharacterized protein family UPF0016 YP_006288122.1 PFAM: TonB dependent receptor YP_006288125.1 PFAM: TonB-dependent Receptor Plug Domain YP_006288126.1 PFAM: Metallo-beta-lactamase superfamily YP_006288127.1 PFAM: Uncharacterised protein family (UPF0153) YP_006288128.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_006288129.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_006288130.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase YP_006288131.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_006288133.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2 YP_006288136.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006288137.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) YP_006288138.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_006288139.1 PFAM: Mechanosensitive ion channel YP_006288140.1 PFAM: Protein of unknown function (DUF805) YP_006288141.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase YP_006288142.1 PFAM: Isochorismatase family YP_006288144.1 PFAM: Transposase, Mutator family YP_006288145.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: dimethyl sulfone monooxygenase SfnG YP_006288146.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, MsuE subfamily YP_006288147.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006288149.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_006288150.1 PFAM: Protein of unknown function, DUF485 YP_006288151.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_006288152.1 PFAM: Ion channel YP_006288153.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006288155.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006288156.1 PFAM: KAP family P-loop domain YP_006288157.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_006288158.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288159.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006288160.1 PFAM: Protein of unknown function (DUF1304) YP_006288161.1 PFAM: GlpM protein YP_006288162.1 PFAM: TENA/THI-4/PQQC family YP_006288163.1 PFAM: Protein of unknown function (DUF475) YP_006288164.1 PFAM: Major Facilitator Superfamily YP_006288165.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_006288166.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_006288167.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_006288168.1 PFAM: Cupin domain; Helix-turn-helix YP_006288169.1 PFAM: Amino acid permease; TIGRFAM: gamma-aminobutyrate permease YP_006288170.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006288171.1 PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type YP_006288172.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_006288173.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288174.1 PFAM: Isochorismatase family YP_006288175.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_006288176.1 PFAM: Flavin containing amine oxidoreductase YP_006288177.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase YP_006288178.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_006288180.1 PFAM: Major Facilitator Superfamily YP_006288181.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288182.1 PFAM: EamA-like transporter family YP_006288185.1 PFAM: Aldo/keto reductase family YP_006288187.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288188.1 PFAM: Sel1 repeat YP_006288191.1 PFAM: HxlR-like helix-turn-helix YP_006288192.1 PFAM: Flavodoxin-like fold YP_006288199.1 PFAM: DNA/RNA non-specific endonuclease YP_006288200.1 PFAM: LysE type translocator YP_006288202.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_006288205.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_006288206.1 PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type YP_006288207.1 PFAM: 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294) YP_006288209.1 PFAM: Antibiotic biosynthesis monooxygenase YP_006288210.1 PFAM: EamA-like transporter family YP_006288211.1 PFAM: Cupin domain; Helix-turn-helix YP_006288212.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_006288213.1 PFAM: 3'-5' exonuclease YP_006288214.1 PFAM: Protein of unknown function (DUF805) YP_006288215.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_006288216.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_006288217.1 PFAM: Acetyltransferase (GNAT) family YP_006288218.1 PFAM: Acetyltransferase (GNAT) family YP_006288219.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases YP_006288220.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006288221.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006288222.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_006288223.1 PFAM: Sulfate transporter family; Carbonic anhydrase YP_006288224.1 PFAM: short chain dehydrogenase YP_006288225.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase YP_006288226.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family YP_006288227.1 PFAM: Sel1 repeat YP_006288231.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family YP_006288233.1 PFAM: Outer membrane efflux protein YP_006288234.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006288235.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_006288236.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006288239.1 PFAM: PGAP1-like protein YP_006288240.1 PFAM: Amino acid permease YP_006288241.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_006288243.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein YP_006288244.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_006288245.1 PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL YP_006288246.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain YP_006288247.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_006288248.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_006288249.1 PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_006288251.1 PFAM: Methyltransferase domain YP_006288252.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_006288253.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_006288254.1 PFAM: Fimbrial assembly protein (PilN) YP_006288255.1 PFAM: Pilus assembly protein, PilO YP_006288256.1 PFAM: Pilus assembly protein, PilP YP_006288257.1 PFAM: Secretin and TonB N terminus short domain; Bacterial type II/III secretion system short domain; Localisation of periplasmic protein complexes; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ YP_006288258.1 PFAM: Shikimate kinase YP_006288259.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_006288261.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_006288262.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial YP_006288263.1 PFAM: Predicted metal-dependent hydrolase YP_006288264.1 PFAM: LemA family YP_006288265.1 PFAM: Domain of unknown function (DUF477) YP_006288266.1 PFAM: Domain of unknown function (DUF477) YP_006288267.1 PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288268.1 PFAM: O-Antigen ligase YP_006288269.1 PFAM: Domain of unknown function (DUF3366); O-Antigen ligase YP_006288270.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_006288271.1 PFAM: BFD-like [2Fe-2S] binding domain YP_006288272.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_006288273.1 PFAM: HD domain; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_006288274.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_006288275.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_006288276.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) YP_006288277.1 PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288278.1 TIGRFAM: type IV pilus modification protein PilV YP_006288279.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288282.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288283.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288284.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_006288285.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_006288286.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_006288287.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_006288288.1 PFAM: alpha/beta hydrolase fold YP_006288289.1 PFAM: Proteobacterial lipase chaperone protein YP_006288290.1 PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase YP_006288291.1 PFAM: Sulfite exporter TauE/SafE YP_006288293.1 PFAM: EamA-like transporter family YP_006288294.1 PFAM: EamA-like transporter family YP_006288295.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006288296.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD YP_006288298.1 PFAM: Antibiotic biosynthesis monooxygenase YP_006288299.1 PFAM: Flavodoxin-like fold YP_006288301.1 PFAM: Major Facilitator Superfamily YP_006288302.1 TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666 YP_006288303.1 PFAM: Copper/zinc superoxide dismutase (SODC) YP_006288304.1 PFAM: Domain of unknown function DUF20 YP_006288305.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006288306.1 PFAM: Endonuclease related to archaeal Holliday junction resolvase YP_006288309.1 PFAM: Methyltransferase domain YP_006288311.1 PFAM: Amino acid permease YP_006288312.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_006288313.1 PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine transaminases YP_006288314.1 PFAM: Arginine N-succinyltransferase beta subunit; TIGRFAM: arginine N-succinyltransferase; arginine and ornithine succinyltransferase subunits YP_006288315.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinylglutamic semialdehyde dehydrogenase YP_006288316.1 PFAM: Succinylarginine dihydrolase; TIGRFAM: succinylarginine dihydrolase YP_006288317.1 PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase YP_006288320.1 PFAM: Subtilase family YP_006288323.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006288324.1 PFAM: EamA-like transporter family YP_006288325.1 PFAM: YCII-related domain YP_006288326.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_006288327.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_006288329.1 PFAM: Protein of unknown function (DUF1311) YP_006288330.1 TIGRFAM: putative DNA modification/repair radical SAM protein YP_006288331.1 TIGRFAM: probable DNA metabolism protein YP_006288332.1 PFAM: CBS domain; HPP family YP_006288333.1 PFAM: PspC domain YP_006288335.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288337.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_006288338.1 PFAM: Coproporphyrinogen III oxidase YP_006288339.1 PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II YP_006288340.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_006288341.1 PFAM: Inositol monophosphatase family YP_006288342.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_006288343.1 PFAM: ABC transporter YP_006288344.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein YP_006288345.1 PFAM: mce related protein YP_006288346.1 PFAM: Toluene tolerance, Ttg2 YP_006288347.1 TIGRFAM: anti-anti-sigma factor YP_006288348.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) YP_006288349.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein YP_006288350.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_006288351.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_006288352.1 PFAM: Helicase conserved C-terminal domain; OB-fold nucleic acid binding domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG YP_006288353.1 PFAM: NAD dependent epimerase/dehydratase family YP_006288354.1 PFAM: Bacterial extracellular solute-binding protein, family 7 YP_006288355.1 PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase YP_006288356.1 PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II YP_006288357.1 PFAM: Sodium:dicarboxylate symporter family YP_006288358.1 PFAM: Predicted metal-dependent hydrolase YP_006288359.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB YP_006288360.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006288361.1 PFAM: Globin YP_006288362.1 PFAM: Bacterial protein of unknown function (DUF853) YP_006288363.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_006288364.1 PFAM: Glutamine amidotransferase class-I YP_006288365.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_006288366.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_006288367.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_006288368.1 PFAM: Ribosomal protein L23 YP_006288369.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_006288370.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_006288371.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_006288372.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_006288373.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_006288374.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_006288375.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_006288376.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_006288377.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_006288378.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_006288379.1 PFAM: Ribosomal protein S14p/S29e YP_006288380.1 PFAM: Ribosomal protein S8 YP_006288381.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_006288382.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_006288383.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_006288384.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle YP_006288385.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_006288386.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_006288387.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_006288388.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_006288389.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_006288390.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_006288391.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_006288392.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_006288393.1 PFAM: Flavin-binding monooxygenase-like YP_006288394.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288395.1 PFAM: Protein of unknown function (DUF339) YP_006288399.1 PFAM: Rhomboid family; TIGRFAM: rhomboid family GlyGly-CTERM serine protease YP_006288400.1 PFAM: DctM-like transporters YP_006288402.1 PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein YP_006288403.1 PFAM: Peptidase family M3 YP_006288404.1 PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_006288405.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_006288407.1 PFAM: Nitroreductase family YP_006288409.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_006288410.1 PFAM: AraC-like ligand binding domain YP_006288411.1 PFAM: EamA-like transporter family YP_006288412.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_006288413.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV YP_006288414.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase YP_006288415.1 PFAM: Protein of unknown function (DUF3108) YP_006288417.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006288418.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_006288419.1 PFAM: PhoH-like protein YP_006288420.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_006288421.1 PFAM: Transglycosylase SLT domain YP_006288422.1 PFAM: Ribonuclease T2 family YP_006288423.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase YP_006288424.1 PFAM: Protein of unknown function (DUF2789) YP_006288426.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_006288427.1 PFAM: Protein of unknown function (DUF519) YP_006288428.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase YP_006288432.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288433.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288434.1 PFAM: Protein of unknown function (DUF1446) YP_006288435.1 PFAM: short chain dehydrogenase YP_006288436.1 PFAM: Carboxyl transferase domain YP_006288437.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288438.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006288439.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006288441.1 PFAM: Stringent starvation protein B YP_006288442.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006288443.1 PFAM: Ribosomal protein S9/S16 YP_006288444.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_006288445.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_006288446.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_006288447.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YP_006288448.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_006288449.1 PFAM: LrgB-like family YP_006288451.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX YP_006288452.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006288455.1 PFAM: OmpA family YP_006288456.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006288458.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_006288460.1 PFAM: Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein YP_006288462.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_006288463.1 PFAM: Thioesterase superfamily YP_006288465.1 PFAM: Protein of unknown function (DUF520) YP_006288466.1 PFAM: Rhodanese-like domain YP_006288467.1 PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain YP_006288469.1 PFAM: YCII-related domain YP_006288470.1 PFAM: Intracellular septation protein A; TIGRFAM: intracellular septation protein A YP_006288471.1 PFAM: PHP domain YP_006288472.1 PFAM: Bestrophin YP_006288473.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_006288474.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_006288475.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_006288476.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_006288477.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_006288478.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_006288479.1 PFAM: LemA family YP_006288481.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_006288484.1 PFAM: KAP family P-loop domain YP_006288486.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006288487.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase YP_006288488.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I YP_006288489.1 PFAM: Protein of unknown function (DUF1022) YP_006288491.1 PFAM: Polysaccharide deacetylase YP_006288492.1 PFAM: Glycosyl transferase family 2 YP_006288493.1 PFAM: Glycosyl transferases group 1 YP_006288495.1 PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein) YP_006288499.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_006288501.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006288504.1 PFAM: Domain of unknown function (DUF3315) YP_006288505.1 PFAM: Phosphate-starvation-inducible E YP_006288506.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006288507.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288508.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288509.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006288511.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006288512.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006288513.1 PFAM: Uncharacterized ACR, YdiU/UPF0061 family YP_006288514.1 PFAM: Fatty acid desaturase YP_006288515.1 PFAM: META domain YP_006288516.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_006288517.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase YP_006288518.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006288519.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_006288520.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_006288521.1 PFAM: Domain of Unknown Function (DUF1543) YP_006288522.1 PFAM: Protein of unknown function (DUF2804) YP_006288523.1 PFAM: Predicted metal-dependent hydrolase YP_006288525.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_006288526.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_006288527.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_006288528.1 PFAM: Sporulation related domain YP_006288529.1 PFAM: Dual specificity phosphatase, catalytic domain YP_006288530.1 PFAM: Metallo-beta-lactamase superfamily YP_006288531.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family YP_006288532.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_006288534.1 PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter YP_006288535.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_006288536.1 PFAM: Acetyltransferase (GNAT) family YP_006288537.1 PFAM: Patatin-like phospholipase YP_006288539.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006288540.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006288542.1 PFAM: CoA-transferase family III YP_006288543.1 PFAM: Carbohydrate-selective porin, OprB family YP_006288544.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family YP_006288545.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_006288546.1 PFAM: Bacterial protein of unknown function (DUF934) YP_006288547.1 PFAM: Small Multidrug Resistance protein YP_006288548.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_006288549.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006288550.1 PFAM: Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006288551.1 PFAM: OprF membrane domain; OmpA family YP_006288553.1 PFAM: Uncharacterized protein family UPF0027 YP_006288554.1 PFAM: Amino acid permease YP_006288555.1 PFAM: Methyltransferase small domain; Methyltransferase small domain N-terminal YP_006288556.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_006288557.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_006288558.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein YP_006288559.1 PFAM: AIG2-like family YP_006288560.1 PFAM: PPIC-type PPIASE domain YP_006288561.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_006288562.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_006288563.1 PFAM: TonB-dependent Receptor Plug Domain YP_006288566.1 PFAM: TonB dependent receptor YP_006288567.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006288568.1 PFAM: Membrane transport protein YP_006288569.1 PFAM: Sel1 repeat YP_006288570.1 PFAM: Disulfide bond isomerase protein N-terminus YP_006288571.1 PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ YP_006288572.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_006288573.1 PFAM: Protein of unknown function, DUF488 YP_006288574.1 PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA YP_006288575.1 PFAM: Domain of unknown function (DUF1508) YP_006288576.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_006288577.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006288578.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006288580.1 PFAM: Response regulator receiver domain YP_006288581.1 PFAM: Response regulator receiver domain YP_006288582.1 PFAM: CheW-like domain YP_006288583.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_006288584.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Hpt domain YP_006288586.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade YP_006288587.1 PFAM: Entericidin EcnA/B family YP_006288588.1 PFAM: Domain of unknown function (DUF1853) YP_006288589.1 PFAM: Protein of unknown function (DUF454) YP_006288590.1 PFAM: L,D-transpeptidase catalytic domain YP_006288591.1 PFAM: DUF218 domain YP_006288592.1 PFAM: Flavodoxin; Oxidoreductase NAD-binding domain YP_006288594.1 PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666 YP_006288595.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein YP_006288596.1 PFAM: Nitroreductase family YP_006288598.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein YP_006288599.1 PFAM: Patatin-like phospholipase YP_006288600.1 PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form YP_006288601.1 PFAM: SbmA/BacA-like family YP_006288603.1 PFAM: Protein of unknown function (DUF1176) YP_006288605.1 PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family YP_006288607.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_006288608.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_006288609.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_006288610.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_006288611.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_006288612.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_006288613.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_006288614.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_006288616.1 PFAM: Protein of unknown function (DUF1298); Uncharacterised protein family (UPF0089); TIGRFAM: acyltransferase, WS/DGAT/MGAT YP_006288617.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); 5'-adenylylsulfate reductase, thioredoxin-independent YP_006288618.1 TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein YP_006288619.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_006288620.1 PFAM: Flavodoxin-like fold YP_006288622.1 PFAM: Fatty acid desaturase YP_006288623.1 PFAM: PaaX-like protein C-terminal domain YP_006288624.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_006288625.1 PFAM: AraC-type transcriptional regulator N-terminus YP_006288626.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family YP_006288627.1 PFAM: DJ-1/PfpI family YP_006288628.1 PFAM: Amino acid permease YP_006288629.1 PFAM: PrpF protein; TIGRFAM: probable AcnD-accessory protein PrpF YP_006288630.1 PFAM: Polyprenyl synthetase YP_006288631.1 PFAM: Protein of unknown function (DUF419) YP_006288632.1 PFAM: SPFH domain / Band 7 family YP_006288633.1 PFAM: NfeD-like YP_006288634.1 PFAM: Patatin-like phospholipase YP_006288635.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006288637.1 PFAM: Porin subfamily YP_006288638.1 PFAM: Sulfatase; Domain of unknown function (DUF1705) YP_006288639.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006288640.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006288641.1 PFAM: PAP2 superfamily YP_006288642.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_006288643.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288644.1 PFAM: Membrane transport protein YP_006288645.1 PFAM: DnaJ domain YP_006288646.1 PFAM: Methyltransferase domain YP_006288647.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_006288649.1 PFAM: short chain dehydrogenase YP_006288651.1 PFAM: Domain of unknown function (DUF74) YP_006288652.1 PFAM: Domain of unknown function (DUF74) YP_006288653.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006288654.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006288655.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006288656.1 PFAM: PAP2 superfamily YP_006288657.1 PFAM: Site-specific recombinase YP_006288658.1 PFAM: Polyprenyl synthetase YP_006288659.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_006288660.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_006288661.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA YP_006288662.1 PFAM: Protein of unknown function (DUF3298) YP_006288663.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase YP_006288664.1 PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain YP_006288665.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_006288666.1 PFAM: HxlR-like helix-turn-helix YP_006288668.1 PFAM: Amino acid permease YP_006288669.1 PFAM: Iron-containing alcohol dehydrogenase YP_006288671.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B YP_006288672.1 PFAM: Protein of unknown function (DUF493) YP_006288673.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_006288675.1 PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein YP_006288677.1 PFAM: Rhodanese-like domain YP_006288678.1 PFAM: Protein of unknown function (DUF1289) YP_006288679.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type) YP_006288680.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit YP_006288681.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein YP_006288682.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup YP_006288683.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_006288684.1 PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component YP_006288685.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) YP_006288686.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_006288687.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit YP_006288688.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit YP_006288689.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_006288690.1 PFAM: Protein of unknown function (DUF808) YP_006288691.1 PFAM: Putative neutral zinc metallopeptidase YP_006288692.1 PFAM: Sodium/hydrogen exchanger family YP_006288700.1 TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); VCBS repeat YP_006288702.1 PFAM: Bacterial capsule synthesis protein PGA_cap YP_006288704.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006288705.1 PFAM: Universal stress protein family YP_006288706.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006288707.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_006288708.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_006288709.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_006288712.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_006288713.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ YP_006288714.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_006288715.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006288718.1 PFAM: PhoD-like phosphatase YP_006288719.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_006288720.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA) YP_006288722.1 PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter YP_006288723.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_006288724.1 PFAM: FAD dependent oxidoreductase YP_006288725.1 PFAM: Phosphoenolpyruvate carboxykinase YP_006288726.1 PFAM: Diacylglycerol kinase catalytic domain YP_006288727.1 PFAM: Calcineurin-like phosphoesterase YP_006288728.1 PFAM: BNR/Asp-box repeat; TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass) YP_006288729.1 PFAM: Chaperonin 10 Kd subunit YP_006288730.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_006288731.1 PFAM: Prokaryotic diacylglycerol kinase YP_006288732.1 PFAM: Metallo-beta-lactamase superfamily YP_006288734.1 PFAM: Peptidase family M48 YP_006288735.1 PFAM: Transglycosylase SLT domain YP_006288736.1 PFAM: PP-loop family YP_006288737.1 PFAM: SCP-2 sterol transfer family YP_006288738.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3 YP_006288739.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreB YP_006288740.1 TIGRFAM: conserved hypothetical protein YP_006288741.1 PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; TIGRFAM: non-ribosomal peptide synthetase terminal domain of unknown function; amino acid adenylation domain YP_006288743.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288744.1 PFAM: Predicted metal-dependent hydrolase YP_006288745.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288746.1 PFAM: Nitroreductase family YP_006288747.1 PFAM: short chain dehydrogenase YP_006288748.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288749.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_006288750.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit YP_006288751.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD YP_006288752.1 PFAM: Protein of unknown function (DUF1232) YP_006288753.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Domain of unknown function (DUF3410); D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006288754.1 PFAM: tRNA synthetases class II (D, K and N); TIGRFAM: EF-P lysine aminoacylase GenX YP_006288755.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_006288756.1 PFAM: Amino acid permease YP_006288758.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_006288759.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_006288760.1 PFAM: LysE type translocator YP_006288761.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC YP_006288762.1 PFAM: Electron transfer flavoprotein domain YP_006288763.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain YP_006288764.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_006288765.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase YP_006288766.1 PFAM: GtrA-like protein YP_006288767.1 PFAM: Glycosyl transferase family 2 YP_006288768.1 PFAM: YdjC-like protein YP_006288772.1 PFAM: Outer membrane efflux protein YP_006288773.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase YP_006288776.1 PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671 YP_006288777.1 PFAM: EamA-like transporter family YP_006288778.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family YP_006288779.1 PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein YP_006288780.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_006288781.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_006288782.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_006288784.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_006288785.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_006288786.1 PFAM: Domain of unknown function DUF20 YP_006288787.1 PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda YP_006288789.1 TIGRFAM: Chlamydial polymorphic outer membrane protein repeat YP_006288790.1 PFAM: Protein of unknown function (DUF3106) YP_006288792.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_006288793.1 PFAM: SpoU rRNA Methylase family YP_006288794.1 PFAM: Fructose-1-6-bisphosphatase YP_006288796.1 PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein YP_006288797.1 PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB YP_006288798.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain YP_006288799.1 PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein YP_006288800.1 PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein YP_006288801.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase YP_006288802.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006288803.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_006288804.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_006288805.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_006288806.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form YP_006288807.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily YP_006288810.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006288811.1 PFAM: Cytidylyltransferase; TIGRFAM: cytidyltransferase-related domain YP_006288812.1 PFAM: Cysteine-rich secretory protein family YP_006288813.1 PFAM: AhpC/TSA family YP_006288814.1 PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain YP_006288816.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC YP_006288817.1 PFAM: Radical SAM superfamily YP_006288818.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_006288820.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006288821.1 PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein YP_006288822.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein YP_006288823.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT YP_006288824.1 PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234) YP_006288825.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein YP_006288826.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase YP_006288827.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_006288828.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase YP_006288829.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006288830.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_006288831.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family YP_006288832.1 PFAM: Thioesterase superfamily YP_006288833.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; GTP-binding protein LepA C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_006288834.1 PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_006288836.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial YP_006288837.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_006288839.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_006288840.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase YP_006288841.1 PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) YP_006288842.1 PFAM: short chain dehydrogenase YP_006288844.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006288845.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_006288846.1 PFAM: Aminotransferase class I and II YP_006288848.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006288850.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_006288851.1 PFAM: Lipocalin-like domain YP_006288852.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_006288853.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006288856.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA YP_006288857.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_006288858.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_006288859.1 PFAM: Protein of unknown function (DUF1615) YP_006288860.1 PFAM: Pyocin activator protein PrtN YP_006288861.1 PFAM: Bacterial regulatory protein, Fis family YP_006288867.1 PFAM: ERF superfamily YP_006288870.1 PFAM: Peptidase S24-like YP_006288874.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_006288875.1 PFAM: Bacteriophage replication protein O YP_006288878.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_006288879.1 PFAM: HNH endonuclease YP_006288882.1 PFAM: Protein of unknown function (DUF1064) YP_006288886.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam) YP_006288891.1 PFAM: Uncharacterized conserved protein (DUF2280) YP_006288892.1 PFAM: Terminase-like family; TIGRFAM: phage uncharacterized protein (putative large terminase), C-terminal domain YP_006288894.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_006288900.1 PFAM: Putative stress-responsive nuclear envelope protein YP_006288909.1 PFAM: YcfA-like protein YP_006288910.1 PFAM: Uncharacterised protein family (UPF0150) YP_006288912.1 PFAM: Transglycosylase SLT domain; TIGRFAM: tape measure domain YP_006288913.1 PFAM: Phage minor tail protein YP_006288915.1 PFAM: Phage minor tail protein L; TIGRFAM: lambda-like phage minor tail protein L YP_006288916.1 PFAM: NlpC/P60 family YP_006288917.1 PFAM: Bacteriophage lambda tail assembly protein I YP_006288921.1 PFAM: Lysis protein S YP_006288923.1 PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_006288929.1 PFAM: Phage integrase family YP_006288930.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_006288931.1 PFAM: 2-nitropropane dioxygenase YP_006288932.1 PFAM: VIT family YP_006288934.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_006288937.1 PFAM: Glycosyl transferase family 2 YP_006288940.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase YP_006288941.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_006288942.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006288943.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006288944.1 PFAM: M61 glycyl aminopeptidase YP_006288945.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type YP_006288946.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase YP_006288947.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type YP_006288950.1 PFAM: Protein of unknown function (DUF1228) YP_006288951.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288952.1 PFAM: Sodium:dicarboxylate symporter family YP_006288953.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_006288954.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_006288955.1 PFAM: Protein of unknown function (DUF3144) YP_006288957.1 PFAM: CYTH domain; CHAD domain YP_006288958.1 PFAM: Protein of unknown function (DUF962) YP_006288959.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_006288960.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_006288961.1 PFAM: Phosphopantetheine attachment site YP_006288962.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006288963.1 PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain YP_006288964.1 PFAM: Domain of unknown function DUF20 YP_006288965.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288966.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006288967.1 PFAM: Fatty acid desaturase YP_006288969.1 PFAM: Bacterial regulatory proteins, tetR family YP_006288970.1 PFAM: Protein of unknown function (DUF541) YP_006288971.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases YP_006288972.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_006288973.1 PFAM: Aldehyde dehydrogenase family YP_006288974.1 PFAM: AsnC family YP_006288975.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006288976.1 PFAM: Amino acid permease YP_006288978.1 PFAM: Binding-protein-dependent transport system inner membrane component; Phosphate ATP-binding cassette transporter; TIGRFAM: phosphate ABC transporter, permease protein PstC YP_006288979.1 PFAM: Binding-protein-dependent transport system inner membrane component; Domain of unknown function (DUF3333); TIGRFAM: phosphate ABC transporter, permease protein PstA YP_006288980.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_006288981.1 PFAM: Peptidase family S49 N-terminal; Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_006288983.1 PFAM: Predicted membrane protein (DUF2238) YP_006288984.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase YP_006288985.1 PFAM: Protein of unknown function (DUF489) YP_006288986.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_006288987.1 PFAM: NUDIX domain YP_006288988.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006288989.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_006288992.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_006288993.1 PFAM: Peptidase family M23; LysM domain YP_006288994.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006288995.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease YP_006288996.1 PFAM: Major Facilitator Superfamily YP_006288997.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase YP_006288998.1 PFAM: Sodium Bile acid symporter family YP_006288999.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_006289000.1 PFAM: EAL domain YP_006289002.1 PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase-related protein YP_006289003.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_006289004.1 PFAM: Carbon starvation protein CstA YP_006289005.1 PFAM: Protein of unknown function (DUF466) YP_006289009.1 PFAM: Phage antirepressor protein KilAC domain YP_006289010.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289011.1 PFAM: Purine catabolism regulatory protein-like family YP_006289012.1 PFAM: FAD dependent oxidoreductase YP_006289013.1 PFAM: Protein of unknown function (DUF861) YP_006289014.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_006289015.1 PFAM: Amino acid permease YP_006289016.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289017.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006289018.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006289019.1 PFAM: Rieske [2Fe-2S] domain YP_006289020.1 PFAM: Aldehyde dehydrogenase family YP_006289021.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rubredoxin YP_006289022.1 PFAM: FAD dependent oxidoreductase YP_006289023.1 PFAM: Ethanolamine utilisation protein EutQ YP_006289025.1 PFAM: MarC family integral membrane protein YP_006289026.1 PFAM: EamA-like transporter family YP_006289027.1 PFAM: EamA-like transporter family YP_006289028.1 TIGRFAM: prevent-host-death family protein YP_006289029.1 PFAM: Sugar (and other) transporter YP_006289030.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_006289031.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006289032.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289033.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289034.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289035.1 PFAM: Pirin YP_006289036.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_006289037.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_006289038.1 PFAM: YheO-like PAS domain YP_006289039.1 PFAM: Siderophore-interacting protein; Siderophore-interacting FAD-binding domain YP_006289040.1 PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain YP_006289041.1 PFAM: Phosphopantetheine attachment site; Condensation domain YP_006289044.1 PFAM: FecCD transport family YP_006289045.1 PFAM: FecCD transport family YP_006289046.1 PFAM: ABC transporter YP_006289047.1 PFAM: Periplasmic binding protein YP_006289048.1 PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_006289050.1 PFAM: Condensation domain; Nonribosomal peptide synthase YP_006289051.1 PFAM: AMP-binding enzyme; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase YP_006289052.1 PFAM: Isochorismatase family; Phosphopantetheine attachment site YP_006289053.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain YP_006289055.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_006289056.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006289057.1 PFAM: Thioesterase domain YP_006289058.1 PFAM: 4'-phosphopantetheinyl transferase superfamily YP_006289059.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases YP_006289060.1 PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain YP_006289061.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_006289062.1 PFAM: Protein of unknown function (DUF817) YP_006289063.1 PFAM: Protein of unknown function (DUF3015) YP_006289065.1 PFAM: Beta-lactamase YP_006289068.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_006289069.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit YP_006289070.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit YP_006289071.1 PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC YP_006289072.1 PFAM: Smr domain YP_006289073.1 PFAM: Indole-3-glycerol phosphate synthase YP_006289074.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_006289075.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006289076.1 PFAM: Peptidase family M1 YP_006289077.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_006289078.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_006289079.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial YP_006289080.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_006289081.1 PFAM: Chorismate lyase YP_006289082.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial YP_006289085.1 PFAM: Protein of unknown function (DUF2726) YP_006289086.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain YP_006289087.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_006289088.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine pepetdase DegS YP_006289089.1 PFAM: Poly A polymerase head domain YP_006289090.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain YP_006289091.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_006289092.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_006289093.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form YP_006289094.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase YP_006289095.1 PFAM: Peptidase C39 family YP_006289096.1 PFAM: Carboxymuconolactone decarboxylase family YP_006289097.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain YP_006289098.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_006289099.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_006289101.1 PFAM: Major Facilitator Superfamily YP_006289102.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator) YP_006289103.1 PFAM: OmpW family YP_006289104.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_006289105.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_006289106.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_006289107.1 PFAM: Protein of unknown function (DUF3465) YP_006289108.1 PFAM: AraC-like ligand binding domain YP_006289109.1 PFAM: AzlC protein YP_006289110.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_006289111.1 PFAM: Protein of unknown function (DUF962) YP_006289112.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A YP_006289113.1 TIGRFAM: lytic murein transglycosylase B YP_006289114.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_006289116.1 PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase YP_006289117.1 PFAM: ABC-2 type transporter YP_006289118.1 PFAM: ABC transporter YP_006289120.1 PFAM: Exonuclease YP_006289122.1 PFAM: Family of unknown function (DUF695); Protein of unknown function (DUF1260); TIGRFAM: TIGR01619 family protein YP_006289123.1 PFAM: Serine hydroxymethyltransferase YP_006289124.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006289125.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006289126.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006289128.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289129.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein YP_006289130.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006289131.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006289132.1 PFAM: ABC transporter YP_006289133.1 PFAM: Small Multidrug Resistance protein YP_006289135.1 PFAM: Peptidase family U32 YP_006289136.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II YP_006289137.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_006289138.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006289139.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family YP_006289140.1 PFAM: MgtC family YP_006289141.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain YP_006289142.1 PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein YP_006289143.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006289144.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006289145.1 PFAM: Hemin uptake protein hemP YP_006289146.1 PFAM: NUDIX domain; Thiamine monophosphate synthase/TENI; TIGRFAM: mutator mutT protein YP_006289148.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B; penicillin-binding protein, 1A family YP_006289149.1 PFAM: ATP-NAD kinase YP_006289150.1 PFAM: Protein of unknown function (DUF1315) YP_006289151.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain YP_006289152.1 PFAM: Sodium:dicarboxylate symporter family YP_006289153.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289154.1 PFAM: Putative esterase YP_006289155.1 PFAM: Prephenate dehydratase; Chorismate mutase type II; ACT domain; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2 YP_006289156.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Prephenate dehydrogenase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_006289158.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: Xaa-His dipeptidase YP_006289159.1 TIGRFAM: ribonuclease Z YP_006289161.1 PFAM: Protein of unknown function (DUF328) YP_006289163.1 PFAM: Thiazole biosynthesis protein ThiG YP_006289164.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_006289165.1 PFAM: Protein of unknown function (DUF423) YP_006289166.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH YP_006289167.1 PFAM: SirA-like protein YP_006289168.1 PFAM: 'Cold-shock' DNA-binding domain YP_006289169.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_006289171.1 PFAM: Nitroreductase family YP_006289172.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_006289173.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA YP_006289174.1 PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L YP_006289175.1 PFAM: General secretion pathway, M protein YP_006289176.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2 YP_006289177.1 PFAM: Colicin V production protein YP_006289178.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_006289179.1 PFAM: Peptidase family M48 YP_006289181.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_006289182.1 PFAM: Peptidase family M48 YP_006289183.1 PFAM: Yqey-like protein YP_006289184.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21 YP_006289185.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_006289187.1 PFAM: Protein of unknown function (DUF815) YP_006289188.1 PFAM: Domain of unknown function (DUF3336); Patatin-like phospholipase YP_006289189.1 PFAM: Protein kinase domain YP_006289190.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289191.1 PFAM: Aminotransferase class-III YP_006289192.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_006289193.1 PFAM: Amino acid permease; TIGRFAM: gamma-aminobutyrate permease YP_006289194.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2171) YP_006289196.1 PFAM: GlcNAc-PI de-N-acetylase YP_006289197.1 PFAM: Nodulation protein S (NodS) YP_006289198.1 PFAM: Bacterial OB fold (BOF) protein; TIGRFAM: TIGR00156 family protein YP_006289199.1 PFAM: Sensors of blue-light using FAD YP_006289201.1 PFAM: LysE type translocator YP_006289202.1 PFAM: AraC-like ligand binding domain YP_006289203.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit YP_006289204.1 PFAM: Sodium/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS) YP_006289205.1 PFAM: Protein of unknown function (DUF815) YP_006289206.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006289208.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289209.1 PFAM: Spore Coat Protein U domain YP_006289211.1 PFAM: Spore Coat Protein U domain YP_006289212.1 PFAM: Gram-negative pili assembly chaperone, N-terminal domain YP_006289213.1 PFAM: Fimbrial Usher protein YP_006289214.1 PFAM: Spore Coat Protein U domain YP_006289216.1 PFAM: Sugar (and other) transporter; Osmosensory transporter coiled coil; TIGRFAM: metabolite-proton symporter YP_006289217.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289218.1 PFAM: EamA-like transporter family YP_006289219.1 PFAM: Aminotransferase class I and II; TIGRFAM: aspartate 4-decarboxylase YP_006289220.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: aspartate-alanine antiporter; AspT/YidE/YbjL antiporter duplication domain YP_006289221.1 PFAM: Paraquat-inducible protein A YP_006289222.1 PFAM: Paraquat-inducible protein A YP_006289223.1 PFAM: mce related protein YP_006289224.1 PFAM: Protein of unknown function (DUF330) YP_006289225.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase YP_006289226.1 PFAM: EamA-like transporter family YP_006289227.1 PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase YP_006289228.1 PFAM: Acetyltransferase (GNAT) family YP_006289229.1 PFAM: Transposase IS66 family YP_006289230.1 PFAM: Phage integrase family; TIGRFAM: integron integrase YP_006289231.1 PFAM: Acetyltransferase (GNAT) family; Siderophore biosynthesis protein domain YP_006289232.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006289233.1 PFAM: Nucleotidyltransferase domain YP_006289234.1 PFAM: Small Multidrug Resistance protein YP_006289235.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006289236.1 PFAM: Putative transposase YP_006289237.1 PFAM: Transposase DDE domain YP_006289238.1 PFAM: Ribosomal RNA methyltransferase (FmrO) YP_006289240.1 PFAM: Transposase DDE domain YP_006289241.1 PFAM: ABC transporter YP_006289242.1 PFAM: Phosphotransferase enzyme family YP_006289244.1 PFAM: Transposase IS66 family YP_006289245.1 PFAM: IS66 Orf2 like protein YP_006289247.1 PFAM: Putative helix-turn-helix protein, YlxM / p13 like YP_006289248.1 PFAM: Initiator Replication protein YP_006289249.1 PFAM: Transposase IS66 family YP_006289250.1 PFAM: Major Facilitator Superfamily YP_006289251.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289252.1 PFAM: Sodium:dicarboxylate symporter family YP_006289256.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase YP_006289257.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006289258.1 PFAM: ABC transporter; NIL domain YP_006289259.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_006289260.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_006289261.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_006289262.1 PFAM: Bacterial regulatory protein, Fis family YP_006289263.1 PFAM: Protein of unknown function (DUF3426); TIGRFAM: MJ0042 family finger-like domain YP_006289264.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_006289266.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_006289268.1 PFAM: Domain of unknown function (DUF404); Domain of unknown function (DUF407) YP_006289269.1 PFAM: Bacterial domain of unknown function (DUF403) YP_006289270.1 PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region YP_006289271.1 PFAM: Proteasome subunit YP_006289272.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_006289273.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_006289274.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_006289275.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_006289276.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_006289277.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase YP_006289278.1 PFAM: Prokaryotic Cytochrome C oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV YP_006289279.1 PFAM: Cytochrome c oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III YP_006289280.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I YP_006289281.1 PFAM: COX Aromatic Rich Motif; Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: cytochrome o ubiquinol oxidase subunit II YP_006289282.1 PFAM: RDD family YP_006289283.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase YP_006289284.1 PFAM: Domain of unknown function (DUF299) YP_006289285.1 TIGRFAM: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA YP_006289286.1 PFAM: Polysaccharide deacetylase; TIGRFAM: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YP_006289287.1 PFAM: Glycosyl transferase family 2; TIGRFAM: poly-beta-1,6 N-acetyl-D-glucosamine synthase YP_006289288.1 TIGRFAM: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YP_006289290.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1 YP_006289293.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289294.1 PFAM: DJ-1/PfpI family YP_006289295.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_006289296.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_006289297.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006289298.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_006289300.1 PFAM: short chain dehydrogenase YP_006289301.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289302.1 PFAM: AMP-binding enzyme YP_006289303.1 PFAM: Flavin reductase like domain YP_006289304.1 PFAM: MoeZ/MoeB domain; ThiF family YP_006289305.1 PFAM: ABC1 family YP_006289306.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_006289307.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) YP_006289308.1 PFAM: Potassium-transporting ATPase A subunit; TIGRFAM: K+-transporting ATPase, KdpA YP_006289309.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit YP_006289310.1 PFAM: K+-transporting ATPase, c chain; TIGRFAM: K+-transporting ATPase, C subunit YP_006289311.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Osmosensitive K+ channel His kinase sensor domain; His Kinase A (phosphoacceptor) domain; Universal stress protein family YP_006289312.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006289313.1 PFAM: Glutamine synthetase, catalytic domain YP_006289314.1 PFAM: Protein of unknown function (DUF2799) YP_006289315.1 PFAM: Ubiquinone biosynthesis protein COQ7 YP_006289316.1 PFAM: Major Facilitator Superfamily YP_006289317.1 PFAM: Surface antigen variable number repeat; Surface antigen YP_006289318.1 PFAM: Family of unknown function (DUF490) YP_006289320.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2 YP_006289322.1 PFAM: Ion transport protein YP_006289323.1 PFAM: Major Facilitator Superfamily YP_006289325.1 PFAM: Nickel uptake substrate-specific transmembrane region YP_006289326.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289327.1 PFAM: Protein of unknown function (DUF441) YP_006289329.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_006289330.1 PFAM: Acetyltransferase (GNAT) family YP_006289331.1 PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family YP_006289332.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006289333.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_006289334.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_006289335.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_006289336.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_006289337.1 PFAM: EamA-like transporter family YP_006289338.1 PFAM: Nitroreductase family YP_006289340.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_006289341.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase YP_006289342.1 PFAM: Glutamine amidotransferase class-I YP_006289343.1 PFAM: Ethanolamine ammonia-lyase light chain (EutC) YP_006289344.1 PFAM: Ethanolamine ammonia lyase large subunit (EutB) YP_006289345.1 PFAM: Amino acid permease; TIGRFAM: ethanolamine permease YP_006289346.1 PFAM: Aldehyde dehydrogenase family YP_006289349.1 PFAM: Iron-containing alcohol dehydrogenase YP_006289350.1 PFAM: PIF1 helicase YP_006289351.1 PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase YP_006289352.1 PFAM: Bacterial transcription activator, effector binding domain YP_006289353.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase YP_006289356.1 PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type YP_006289357.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006289358.1 PFAM: short chain dehydrogenase YP_006289360.1 PFAM: Chorismate mutase type II; TIGRFAM: chorismate mutase, putative YP_006289361.1 PFAM: AsnC family YP_006289363.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289364.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289365.1 PFAM: Mechanosensitive ion channel YP_006289370.1 PFAM: Acetyltransferase (GNAT) family YP_006289373.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289374.1 PFAM: OmpW family YP_006289377.1 PFAM: ABC transporter YP_006289378.1 PFAM: Universal stress protein family YP_006289381.1 PFAM: RDD family YP_006289383.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase YP_006289384.1 PFAM: MgtC family YP_006289385.1 PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter YP_006289386.1 PFAM: MarR family; AsnC family YP_006289387.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein YP_006289388.1 PFAM: Transaldolase; TIGRFAM: transaldolase YP_006289389.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289390.1 PFAM: Bacterial Transmembrane Pair family YP_006289391.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006289392.1 PFAM: short chain dehydrogenase YP_006289393.1 PFAM: MaoC like domain YP_006289394.1 PFAM: Beta-lactamase YP_006289395.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289396.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_006289397.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau YP_006289399.1 PFAM: Phosphoesterase family; Domain of unknown function (DUF756); TIGRFAM: phospholipase C, phosphocholine-specific, Pseudomonas-type YP_006289400.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_006289401.1 PFAM: Iron-containing alcohol dehydrogenase YP_006289402.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme YP_006289403.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006289404.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_006289405.1 PFAM: DUF218 domain YP_006289407.1 PFAM: Conserved region in glutamate synthase YP_006289409.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289411.1 PFAM: Phage integrase family YP_006289420.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_006289426.1 PFAM: Protein of unknown function (DUF1376) YP_006289431.1 PFAM: Protein of unknown function (DUF559) YP_006289438.1 PFAM: Protein of unknown function (DUF1073); TIGRFAM: phage-related protein, HI1409 family YP_006289439.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_006289440.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2213) YP_006289443.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2184) YP_006289449.1 PFAM: Protein of unknown function (DUF3383) YP_006289450.1 PFAM: Protein of unknown function (DUF3277) YP_006289453.1 PFAM: Protein of unknown function (DUF1311) YP_006289460.1 PFAM: Baseplate J-like protein YP_006289461.1 PFAM: Protein of unknown function (DUF2612) YP_006289468.1 PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_006289473.1 PFAM: Integrase core domain YP_006289474.1 PFAM: Transposase YP_006289477.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006289478.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_006289479.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_006289480.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family YP_006289482.1 PFAM: Response regulator receiver domain; ANTAR domain YP_006289484.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit YP_006289485.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase [NAD(P)H], large subunit YP_006289486.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006289488.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_006289489.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial YP_006289490.1 PFAM: ThiS family YP_006289491.1 PFAM: MoaE protein YP_006289492.1 PFAM: MoaC family; Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor synthesis domain YP_006289493.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_006289494.1 PFAM: HxlR-like helix-turn-helix YP_006289495.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006289496.1 PFAM: EamA-like transporter family YP_006289497.1 PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family YP_006289500.1 PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE YP_006289501.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_006289502.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: fumarate hydratase, class II YP_006289506.1 PFAM: FAD dependent oxidoreductase YP_006289508.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_006289510.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_006289511.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289512.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I) YP_006289513.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_006289514.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_006289515.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_006289516.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_006289517.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_006289518.1 PFAM: Cytidylyltransferase family YP_006289519.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_006289520.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_006289521.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_006289522.1 PFAM: Outer membrane protein (OmpH-like) YP_006289523.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_006289524.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_006289525.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_006289527.1 PFAM: RecX family YP_006289528.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_006289529.1 PFAM: S4 domain YP_006289530.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_006289531.1 PFAM: Fels-1 Prophage Protein-like YP_006289534.1 PFAM: Acetyltransferase (GNAT) family YP_006289535.1 PFAM: AsnC family YP_006289536.1 PFAM: Aminotransferase class-V; TIGRFAM: kynureninase YP_006289537.1 PFAM: Amino acid permease YP_006289538.1 PFAM: alpha/beta hydrolase fold YP_006289539.1 PFAM: Peptidase inhibitor I9; Subtilase family YP_006289540.1 PFAM: Sulfate transporter family; STAS domain YP_006289541.1 PFAM: Uncharacterised ACR, COG2135 YP_006289542.1 PFAM: Glucose / Sorbosone dehydrogenase; TIGRFAM: dehydrogenase, PQQ-dependent, s-GDH family YP_006289543.1 PFAM: Universal stress protein family YP_006289544.1 PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006289547.1 PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component YP_006289548.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_006289549.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family YP_006289553.1 PFAM: Domain of unknown function (DUF336) YP_006289554.1 PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier YP_006289555.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_006289556.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289558.1 PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family YP_006289559.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_006289560.1 PFAM: CBS domain YP_006289561.1 PFAM: Protein of unknown function (DUF2750) YP_006289565.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_006289566.1 PFAM: Nitroreductase family YP_006289567.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2057) YP_006289568.1 PFAM: Acetyltransferase (GNAT) family YP_006289569.1 PFAM: Cyd operon protein YbgE (Cyd_oper_YbgE) YP_006289570.1 PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT YP_006289571.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_006289572.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_006289574.1 PFAM: Protein of unknown function (DUF1449) YP_006289575.1 PFAM: Rieske [2Fe-2S] domain YP_006289576.1 PFAM: pfkB family carbohydrate kinase YP_006289577.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289578.1 PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase family M16) YP_006289579.1 PFAM: Phospholipase A1 YP_006289580.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_006289581.1 PFAM: TrkA-N domain YP_006289582.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form YP_006289583.1 PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase YP_006289584.1 PFAM: Protein of unknown function DUF45 YP_006289586.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_006289588.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS YP_006289589.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA YP_006289590.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family YP_006289591.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_006289593.1 PFAM: Transcriptional regulator PadR-like family; Virulence activator alpha C-term YP_006289594.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_006289596.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006289598.1 PFAM: Predicted metal-dependent hydrolase YP_006289600.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_006289601.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_006289602.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_006289603.1 PFAM: Protein of unknown function (DUF421) YP_006289604.1 PFAM: Septum formation initiator YP_006289605.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_006289606.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_006289607.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_006289608.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_006289609.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase YP_006289610.1 TIGRFAM: 3-oxoadipate enol-lactonase YP_006289611.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006289612.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: 4-carboxymuconolactone decarboxylase YP_006289613.1 PFAM: Protocatechuate 3,4-dioxygenase beta subunit N terminal; Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit YP_006289614.1 PFAM: Dioxygenase; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit YP_006289615.1 PFAM: Type I 3-dehydroquinase; TIGRFAM: 3-dehydroquinate dehydratase, type I YP_006289616.1 TIGRFAM: parallel beta-helix repeat (two copies) YP_006289617.1 PFAM: Carbohydrate-selective porin, OprB family YP_006289618.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family YP_006289620.1 PFAM: YeeE/YedE family (DUF395) YP_006289621.1 PFAM: YeeE/YedE family (DUF395) YP_006289622.1 PFAM: Metallo-beta-lactamase superfamily YP_006289623.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family YP_006289624.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289625.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289626.1 PFAM: Phosphotransferase enzyme family YP_006289627.1 PFAM: Phosphoglycerate mutase family YP_006289628.1 PFAM: short chain dehydrogenase YP_006289629.1 PFAM: outer membrane porin, OprD family YP_006289630.1 PFAM: Major Facilitator Superfamily YP_006289631.1 PFAM: MarR family YP_006289632.1 PFAM: Amidase YP_006289633.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289636.1 PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain YP_006289637.1 PFAM: Ring hydroxylating beta subunit YP_006289638.1 PFAM: short chain dehydrogenase YP_006289639.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006289640.1 PFAM: Flavin reductase like domain YP_006289642.1 PFAM: Copper amine oxidase, N2 domain; Copper amine oxidase N-terminal domain; Copper amine oxidase, N3 domain; Copper amine oxidase, enzyme domain YP_006289644.1 PFAM: Aldehyde dehydrogenase family YP_006289645.1 PFAM: Penicillin amidase YP_006289646.1 TIGRFAM: 3-oxoadipate enol-lactonase YP_006289647.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_006289648.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_006289649.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_006289650.1 PFAM: Dioxygenase; Catechol dioxygenase N terminus; TIGRFAM: catechol 1,2-dioxygenase, proteobacterial YP_006289651.1 PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase YP_006289652.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: muconate and chloromuconate cycloisomerases YP_006289653.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289654.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_006289655.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006289656.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006289657.1 PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter YP_006289658.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_006289659.1 PFAM: Aldehyde dehydrogenase family YP_006289660.1 PFAM: Phosphotransferase enzyme family YP_006289662.1 PFAM: Phosphoglycerate mutase family YP_006289663.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289664.1 PFAM: short chain dehydrogenase YP_006289665.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Propionate catabolism activator; TIGRFAM: propionate catabolism operon regulatory protein PrpR YP_006289666.1 PFAM: AMP-binding enzyme YP_006289667.1 PFAM: Protein of unknown function, DUF485 YP_006289668.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family YP_006289669.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family YP_006289670.1 PFAM: Aldehyde dehydrogenase family YP_006289671.1 PFAM: Acetoacetate decarboxylase (ADC) YP_006289673.1 PFAM: alpha/beta hydrolase fold YP_006289674.1 PFAM: Catalase; Catalase-related immune-responsive YP_006289676.1 PFAM: DJ-1/PfpI family YP_006289677.1 PFAM: alpha/beta hydrolase fold YP_006289678.1 PFAM: MarR family YP_006289679.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006289680.1 PFAM: Saccharopine dehydrogenase YP_006289681.1 PFAM: RibD C-terminal domain YP_006289682.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_006289683.1 PFAM: DJ-1/PfpI family YP_006289684.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006289685.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_006289687.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289688.1 PFAM: Antibiotic biosynthesis monooxygenase YP_006289689.1 PFAM: Isochorismatase family YP_006289690.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289691.1 PFAM: Glucose / Sorbosone dehydrogenase; TIGRFAM: dehydrogenase, PQQ-dependent, s-GDH family YP_006289692.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_006289694.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006289695.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289696.1 PFAM: Haemolysin secretion/activation protein ShlB/FhaC/HecB; POTRA domain, ShlB-type YP_006289697.1 PFAM: Possible hemagglutinin (DUF638); haemagglutination activity domain; Possible hemagglutinin (DUF637); TIGRFAM: filamentous hemagglutinin family N-terminal domain YP_006289700.1 PFAM: Major Facilitator Superfamily YP_006289701.1 PFAM: Amidohydrolase; COG3618 YP_006289702.1 PFAM: Dicarboxylate carrier protein MatC N-terminus YP_006289703.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006289704.1 PFAM: SMP-30/Gluconolaconase/LRE-like region YP_006289705.1 PFAM: Major Facilitator Superfamily YP_006289706.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289707.1 PFAM: Protein of unknown function, DUF606 YP_006289708.1 PFAM: Protein of unknown function, DUF606 YP_006289709.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006289710.1 PFAM: Major Facilitator Superfamily YP_006289711.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase YP_006289712.1 PFAM: Demethylmenaquinone methyltransferase YP_006289715.1 PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass) YP_006289716.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006289717.1 PFAM: Major Facilitator Superfamily YP_006289718.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289719.1 PFAM: Aldehyde dehydrogenase family YP_006289720.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_006289721.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family YP_006289722.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289723.1 PFAM: Major Facilitator Superfamily YP_006289724.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_006289725.1 PFAM: AraC-type transcriptional regulator N-terminus YP_006289726.1 PFAM: Cupin domain YP_006289727.1 PFAM: Carboxymuconolactone decarboxylase family YP_006289728.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_006289729.1 PFAM: Periplasmic binding protein YP_006289730.1 PFAM: FecCD transport family YP_006289731.1 PFAM: ABC transporter YP_006289732.1 PFAM: Acetyltransferase (GNAT) family YP_006289733.1 PFAM: AraC-like ligand binding domain YP_006289734.1 PFAM: Sulfite exporter TauE/SafE YP_006289735.1 PFAM: Phosphoribosyl transferase domain YP_006289736.1 PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family YP_006289737.1 PFAM: NUDIX domain YP_006289738.1 PFAM: Methylene-tetrahydrofolate reductase C terminal; Methylenetetrahydrofolate reductase YP_006289751.1 PFAM: Bacterial regulatory proteins, luxR family YP_006289752.1 PFAM: Amidase YP_006289753.1 PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A) YP_006289754.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_006289756.1 PFAM: GH3 auxin-responsive promoter YP_006289757.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006289759.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_006289762.1 PFAM: Helix-turn-helix YP_006289763.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289765.1 PFAM: Phage antirepressor protein KilAC domain YP_006289768.1 PFAM: PAAR motif YP_006289770.1 PFAM: short chain dehydrogenase YP_006289771.1 PFAM: short chain dehydrogenase YP_006289775.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006289776.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006289777.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit YP_006289778.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_006289779.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006289781.1 PFAM: Flavin-binding monooxygenase-like YP_006289782.1 PFAM: Flavin containing amine oxidoreductase YP_006289783.1 PFAM: Saccharopine dehydrogenase YP_006289784.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289785.1 PFAM: FAD dependent oxidoreductase YP_006289787.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_006289789.1 PFAM: Fimbrial protein YP_006289792.1 PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain YP_006289793.1 PFAM: Fimbrial Usher protein YP_006289794.1 PFAM: Fimbrial protein YP_006289796.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_006289798.1 PFAM: Catalase YP_006289805.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_006289806.1 PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis enzyme PqqE; radical SAM additional 4Fe4S-binding domain YP_006289807.1 PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD YP_006289808.1 PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C YP_006289809.1 TIGRFAM: coenzyme PQQ biosynthesis protein B YP_006289810.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_006289811.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain YP_006289812.1 PFAM: Ferric uptake regulator family YP_006289813.1 PFAM: Isochorismatase family YP_006289814.1 PFAM: short chain dehydrogenase YP_006289815.1 PFAM: ABC transporter; TIGRFAM: molybdenum ABC transporter, ATP-binding protein YP_006289816.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein YP_006289817.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_006289818.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain YP_006289819.1 PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain; TIGRFAM: anthranilate 1,2-dioxygenase, large subunit YP_006289820.1 PFAM: Ring hydroxylating beta subunit; TIGRFAM: anthranilate 1,2-dioxygenase, small subunit YP_006289821.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006289824.1 PFAM: Flavin reductase like domain YP_006289826.1 PFAM: short chain dehydrogenase YP_006289827.1 PFAM: Dienelactone hydrolase family YP_006289828.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006289832.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase YP_006289833.1 PFAM: Citrate transporter YP_006289835.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289836.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_006289837.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_006289838.1 PFAM: Short chain fatty acid transporter; TIGRFAM: TIGR00366 family protein YP_006289839.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_006289840.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006289841.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006289844.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase YP_006289845.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289846.1 PFAM: Sugar (and other) transporter; Major Facilitator Superfamily YP_006289847.1 PFAM: Protein of unknown function (DUF971) YP_006289849.1 PFAM: ABC transporter YP_006289850.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006289851.1 PFAM: NMT1/THI5 like YP_006289853.1 PFAM: domain; FAD binding domain YP_006289854.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006289855.1 PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family YP_006289856.1 PFAM: Flavodoxin-like fold YP_006289857.1 PFAM: HxlR-like helix-turn-helix YP_006289859.1 PFAM: EamA-like transporter family YP_006289860.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain YP_006289861.1 PFAM: Sulfite exporter TauE/SafE YP_006289862.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein YP_006289863.1 PFAM: Metallo-beta-lactamase superfamily YP_006289864.1 PFAM: helix-turn-helix, Psq domain; Sigma-54 interaction domain YP_006289865.1 PFAM: Bestrophin YP_006289866.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_006289867.1 PFAM: short chain dehydrogenase; TIGRFAM: acetoin reductases YP_006289868.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase YP_006289869.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form YP_006289870.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_006289871.1 PFAM: Dehydrogenase E1 component YP_006289872.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase YP_006289874.1 PFAM: TENA/THI-4/PQQC family YP_006289875.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006289876.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_006289877.1 PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases YP_006289878.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_006289879.1 PFAM: VWA domain containing CoxE-like protein YP_006289880.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_006289882.1 PFAM: YcgL domain YP_006289886.1 PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D YP_006289887.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_006289888.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_006289890.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase YP_006289892.1 PFAM: Methyltransferase domain YP_006289896.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_006289898.1 PFAM: HIT domain YP_006289899.1 PFAM: Gram-negative porin YP_006289900.1 PFAM: Bacterial protein of unknown function (DUF937) YP_006289902.1 PFAM: Protein of unknown function (DUF2797) YP_006289905.1 PFAM: ABC transporter YP_006289906.1 PFAM: HlyD family secretion protein YP_006289907.1 PFAM: Domain of unknown function (DUF1956); Bacterial regulatory proteins, tetR family YP_006289908.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_006289909.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289913.1 PFAM: Sulfite exporter TauE/SafE YP_006289914.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_006289915.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_006289916.1 PFAM: Histidine acid phosphatase YP_006289917.1 PFAM: Phosphoglycerate mutase family YP_006289918.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_006289919.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_006289921.1 PFAM: Mannitol dehydrogenase C-terminal domain; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED YP_006289922.1 PFAM: Siderophore biosynthesis protein domain YP_006289926.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006289927.1 PFAM: Demethylmenaquinone methyltransferase YP_006289928.1 PFAM: FhuF 2Fe-2S C-terminal domain YP_006289929.1 PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family YP_006289930.1 PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family YP_006289931.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_006289933.1 PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family YP_006289934.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein YP_006289936.1 PFAM: ABC1 family YP_006289937.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006289938.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain YP_006289939.1 PFAM: Fatty acid desaturase YP_006289941.1 PFAM: PPIC-type PPIASE domain YP_006289942.1 PFAM: Bacterial DNA-binding protein YP_006289943.1 PFAM: Poly(hydroxyalcanoate) granule associated protein (phasin); TIGRFAM: poly(hydroxyalkanoate) granule-associated protein YP_006289945.1 PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein YP_006289946.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase IscS YP_006289947.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU YP_006289948.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: iron-sulfur cluster assembly protein IscA; Iron-sulfur cluster assembly accessory protein YP_006289949.1 PFAM: DnaJ domain; HSCB C-terminal oligomerisation domain; TIGRFAM: Fe-S protein assembly co-chaperone HscB YP_006289950.1 PFAM: Hsp70 protein; TIGRFAM: Fe-S protein assembly chaperone HscA YP_006289951.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system YP_006289952.1 PFAM: Adenylate and Guanylate cyclase catalytic domain YP_006289953.1 PFAM: HIT domain YP_006289954.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_006289956.1 PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family YP_006289958.1 PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy YP_006289959.1 PFAM: Semialdehyde dehydrogenase, NAD binding domain YP_006289960.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_006289961.1 PFAM: Phosphoglycerate mutase family YP_006289962.1 PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial YP_006289964.1 PFAM: Uncharacterised ACR, COG2135 YP_006289965.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_006289966.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006289967.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006289968.1 PFAM: Peptidase family M3 YP_006289969.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006289970.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006289972.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor YP_006289973.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006289974.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006289975.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006289976.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006289977.1 PFAM: Acetyltransferase (GNAT) family YP_006289978.1 PFAM: Malate synthase; TIGRFAM: malate synthase G YP_006289979.1 PFAM: AFG1-like ATPase YP_006289981.1 PFAM: Flavin-binding monooxygenase-like YP_006289982.1 PFAM: Membrane protein of unknown function (DUF340) YP_006289983.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1 YP_006289984.1 PFAM: Protein of unknown function (DUF1049) YP_006289985.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit YP_006289986.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1 YP_006289987.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_006289988.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006289989.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_006289990.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006289991.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase YP_006289992.1 PFAM: 6-pyruvoyl tetrahydropterin synthase YP_006289993.1 PFAM: General secretion pathway protein K YP_006289994.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein I/J; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein I; general secretion pathway protein J YP_006289995.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_006289996.1 PFAM: Bacterial regulatory proteins, tetR family YP_006289997.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_006289998.1 PFAM: PilZ domain YP_006289999.1 TIGRFAM: DNA polymerase III, delta' subunit YP_006290000.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_006290001.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_006290002.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA YP_006290003.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006290004.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006290005.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_006290006.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006290007.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_006290008.1 PFAM: Nucleotidyl transferase YP_006290009.1 PFAM: Phosphotransferase enzyme family YP_006290010.1 PFAM: Organic solvent tolerance protein; OstA-like protein YP_006290011.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain YP_006290012.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype YP_006290014.1 PFAM: Phosphoglycerate kinase YP_006290015.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2237) YP_006290016.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_006290017.1 PFAM: Cupin superfamily protein YP_006290018.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290019.1 PFAM: Bacterial regulatory protein, arsR family YP_006290020.1 PFAM: Sodium:dicarboxylate symporter family YP_006290021.1 PFAM: Protein of unknown function (DUF1275) YP_006290022.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2058) YP_006290023.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_006290024.1 PFAM: MaoC like domain YP_006290026.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein YP_006290027.1 PFAM: Sir2 family YP_006290028.1 PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family YP_006290029.1 PFAM: AsnC family YP_006290030.1 PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) YP_006290031.1 PFAM: Uncharacterised protein family (UPF0157) YP_006290032.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase YP_006290034.1 PFAM: Predicted periplasmic protein (DUF2233) YP_006290035.1 PFAM: NC domain YP_006290036.1 PFAM: YceI-like domain YP_006290037.1 PFAM: OsmC-like protein YP_006290038.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_006290039.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_006290042.1 PFAM: FxsA cytoplasmic membrane protein YP_006290043.1 PFAM: Penicillin binding protein transpeptidase domain YP_006290044.1 PFAM: Acetyltransferase (GNAT) family YP_006290045.1 PFAM: Helix-turn-helix YP_006290046.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC YP_006290047.1 PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_006290048.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_006290049.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase YP_006290052.1 PFAM: Fimbrial protein YP_006290053.1 PFAM: Gram-negative pili assembly chaperone, C-terminal domain; Gram-negative pili assembly chaperone, N-terminal domain YP_006290054.1 PFAM: Fimbrial Usher protein YP_006290055.1 PFAM: Fimbrial protein YP_006290057.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290058.1 PFAM: EamA-like transporter family YP_006290060.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_006290061.1 PFAM: Bacterial Transmembrane Pair family YP_006290062.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290064.1 PFAM: Phage integrase family YP_006290066.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290067.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006290068.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_006290069.1 PFAM: HTH domain; AsnC family YP_006290071.1 PFAM: ABC transporter YP_006290072.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006290073.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006290074.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006290075.1 PFAM: Glutathione S-transferase, N-terminal domain YP_006290076.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; TIGRFAM: sulfur acquisition oxidoreductase, SfnB family YP_006290077.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; TIGRFAM: sulfur acquisition oxidoreductase, SfnB family YP_006290078.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family YP_006290079.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_006290080.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_006290081.1 PFAM: ABC transporter; NIL domain YP_006290082.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006290083.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_006290084.1 PFAM: Protein of unknown function (DUF962) YP_006290085.1 PFAM: Cyclic nucleotide-binding domain YP_006290088.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_006290089.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_006290090.1 PFAM: Tautomerase enzyme YP_006290091.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2 YP_006290092.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase YP_006290093.1 PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase YP_006290094.1 PFAM: LysE type translocator YP_006290095.1 PFAM: AraC-like ligand binding domain YP_006290096.1 PFAM: Glutathione peroxidase YP_006290097.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase YP_006290098.1 PFAM: Aminotransferase class I and II YP_006290099.1 PFAM: Sodium:dicarboxylate symporter family YP_006290100.1 PFAM: Asparaginase; TIGRFAM: L-asparaginases, type II YP_006290101.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_006290102.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1 YP_006290103.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_006290106.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_006290107.1 PFAM: Chromate transporter YP_006290108.1 PFAM: Chromate transporter YP_006290109.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290110.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_006290111.1 PFAM: Bacterial regulatory protein, arsR family YP_006290112.1 PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin) YP_006290113.1 PFAM: Protein of unknown function (DUF1427); TIGRFAM: XapX domain YP_006290114.1 PFAM: Amidohydrolase family YP_006290117.1 PFAM: Amidohydrolase family YP_006290118.1 PFAM: Isochorismatase family YP_006290119.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290120.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006290121.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family YP_006290122.1 PFAM: Asp/Glu/Hydantoin racemase YP_006290123.1 PFAM: Taurine catabolism dioxygenase TauD, TfdA family YP_006290124.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006290125.1 PFAM: ABC transporter YP_006290126.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: taurine ABC transporter, periplasmic binding protein YP_006290127.1 PFAM: Sugar (and other) transporter YP_006290128.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family YP_006290129.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290131.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase YP_006290132.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB) YP_006290133.1 PFAM: Protein of unknown function (DUF2474) YP_006290134.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006290135.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290136.1 PFAM: Malonate/sodium symporter MadM subunit; TIGRFAM: malonate transporter, MadM subunit YP_006290137.1 PFAM: Malonate transporter MadL subunit; TIGRFAM: malonate transporter, MadL subunit YP_006290138.1 PFAM: Acyl transferase domain; TIGRFAM: malonate decarboxylase, epsilon subunit YP_006290139.1 PFAM: Phosphoribosyl-dephospho-CoA transferase MdcG; TIGRFAM: malonate decarboxylase holo-[acyl-carrier-protein] synthase YP_006290140.1 PFAM: Malonate decarboxylase gamma subunit (MdcE); TIGRFAM: malonate decarboxylase, gamma subunit YP_006290141.1 PFAM: Carboxyl transferase domain; TIGRFAM: malonate decarboxylase, beta subunit YP_006290142.1 PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: malonate decarboxylase acyl carrier protein YP_006290143.1 PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB YP_006290144.1 TIGRFAM: malonate decarboxylase, alpha subunit YP_006290145.1 PFAM: Major Facilitator Superfamily YP_006290147.1 PFAM: Putative FMN-binding domain YP_006290148.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006290149.1 PFAM: LrgB-like family YP_006290150.1 PFAM: LrgA family YP_006290151.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290152.1 PFAM: Glutathione S-transferase, N-terminal domain YP_006290153.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006290154.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290155.1 PFAM: short chain dehydrogenase YP_006290156.1 PFAM: Rhodanese-like domain YP_006290157.1 PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_006290159.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily YP_006290160.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein YP_006290161.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290162.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006290163.1 PFAM: Bacterial extracellular solute-binding proteins, family 3 YP_006290164.1 PFAM: ABC transporter YP_006290165.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006290166.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family YP_006290167.1 PFAM: Acetyltransferase (GNAT) family YP_006290168.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006290169.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain YP_006290171.1 PFAM: AsnC family YP_006290172.1 PFAM: LysE type translocator YP_006290173.1 PFAM: Peptidase S24-like YP_006290175.1 PFAM: Stress-induced bacterial acidophilic repeat motif YP_006290177.1 PFAM: short chain dehydrogenase YP_006290178.1 PFAM: Catalase; Catalase-related immune-responsive YP_006290180.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_006290188.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290189.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006290191.1 PFAM: Methyltransferase domain YP_006290192.1 PFAM: AMP-binding enzyme YP_006290193.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290194.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290195.1 PFAM: Carboxyl transferase domain YP_006290196.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006290197.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_006290198.1 PFAM: HMGL-like YP_006290199.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290200.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase YP_006290202.1 PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290203.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006290204.1 PFAM: Major Facilitator Superfamily YP_006290206.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit YP_006290207.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit YP_006290208.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006290209.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290210.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006290211.1 PFAM: short chain dehydrogenase YP_006290212.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006290213.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_006290214.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006290215.1 PFAM: Major Facilitator Superfamily YP_006290216.1 PFAM: 2-nitropropane dioxygenase YP_006290217.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006290218.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006290219.1 PFAM: CoA-transferase family III YP_006290220.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290221.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006290222.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; phosphonoacetaldehyde hydrolase YP_006290223.1 PFAM: Aminotransferase class-V; TIGRFAM: 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase YP_006290224.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364 YP_006290225.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: putative 2-aminoethylphosphonate ABC transporter, permease protein YP_006290226.1 PFAM: ABC transporter; TIGRFAM: putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein YP_006290227.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein YP_006290228.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_006290229.1 PFAM: FAD binding domain; TIGRFAM: 4-hydroxybenzoate 3-monooxygenase YP_006290230.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family YP_006290231.1 PFAM: Flavodoxin-like fold YP_006290232.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290233.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: 4-carboxymuconolactone decarboxylase YP_006290234.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_006290236.1 PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin YP_006290237.1 PFAM: Aldehyde dehydrogenase family YP_006290238.1 PFAM: Luciferase-like monooxygenase YP_006290239.1 PFAM: Flavin reductase like domain YP_006290241.1 PFAM: Protein of unknown function (DUF1185) YP_006290242.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006290243.1 PFAM: Protein of unknown function (DUF1330) YP_006290244.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006290245.1 PFAM: Catalase YP_006290247.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290249.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) YP_006290252.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; phenylacetic acid degradation protein PaaD YP_006290253.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006290254.1 PFAM: PaaX-like protein; PaaX-like protein C-terminal domain; TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX YP_006290255.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase YP_006290256.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase YP_006290257.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006290258.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: phenylacetate degradation probable enoyl-CoA hydratase paaB YP_006290259.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006290260.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit YP_006290261.1 PFAM: Domain of unknown function DUF59; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit YP_006290262.1 PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit YP_006290263.1 PFAM: Phenylacetic acid degradation B; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit YP_006290264.1 PFAM: Phenylacetic acid catabolic protein; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit YP_006290265.1 PFAM: MaoC like domain; Aldehyde dehydrogenase family; TIGRFAM: phenylacetic acid degradation protein paaN YP_006290266.1 PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; L-serine dehydratase, iron-sulfur-dependent, single chain form YP_006290267.1 PFAM: Amino acid permease YP_006290268.1 PFAM: Aldehyde dehydrogenase family YP_006290269.1 PFAM: Sugar (and other) transporter YP_006290270.1 PFAM: PAS fold YP_006290271.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006290273.1 PFAM: FAD dependent oxidoreductase YP_006290274.1 PFAM: Proline racemase YP_006290275.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006290276.1 PFAM: EamA-like transporter family YP_006290277.1 PFAM: Dihydrodipicolinate synthetase family YP_006290279.1 PFAM: Prokaryotic membrane lipoprotein lipid attachment site; Domain of unknown function (DUF333); Peptidase inhibitor I78 family YP_006290280.1 PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: redox-sensitive transcriptional activator SoxR YP_006290284.1 PFAM: Uncharacterized BCR, COG1636 YP_006290285.1 PFAM: Acetyltransferase (GNAT) family YP_006290286.1 PFAM: Protein of unknown function (DUF1006) YP_006290287.1 PFAM: Major Facilitator Superfamily YP_006290288.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_006290290.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290291.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006290293.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family YP_006290294.1 PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family YP_006290295.1 PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, ImpA family YP_006290296.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family YP_006290297.1 PFAM: PAAR motif YP_006290298.1 PFAM: OmpA family YP_006290299.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2094); TIGRFAM: type VI secretion-associated protein, BMA_A0400 family YP_006290300.1 PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF YP_006290302.1 PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family YP_006290303.1 PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family YP_006290304.1 PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein YP_006290305.1 PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family YP_006290306.1 PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family YP_006290307.1 PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family YP_006290310.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006290311.1 PFAM: ABC transporter YP_006290312.1 PFAM: NMT1/THI5 like YP_006290313.1 PFAM: Amidase; TIGRFAM: allophanate hydrolase YP_006290314.1 PFAM: NikR C terminal nickel binding domain YP_006290317.1 PFAM: HxlR-like helix-turn-helix YP_006290318.1 PFAM: Flavodoxin-like fold YP_006290319.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain, N-terminal domain; Allophanate hydrolase subunit 1; Biotin-requiring enzyme; TIGRFAM: urea carboxylase; biotin-dependent carboxylase uncharacterized domain YP_006290320.1 PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 1 YP_006290321.1 PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 2 YP_006290322.1 PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase YP_006290323.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_006290324.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290328.1 PFAM: Sel1 repeat YP_006290329.1 PFAM: Voltage gated chloride channel YP_006290330.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme YP_006290331.1 PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; biotin-dependent carboxylase uncharacterized domain YP_006290332.1 PFAM: Allophanate hydrolase subunit 1 YP_006290333.1 PFAM: Protein of unknown function (DUF1445) YP_006290334.1 PFAM: LamB/YcsF family YP_006290335.1 PFAM: Natural resistance-associated macrophage protein YP_006290336.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290339.1 PFAM: RHS protein; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_006290340.1 PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein YP_006290342.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase, subfamily IIIA YP_006290345.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain YP_006290347.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TipAS antibiotic-recognition domain YP_006290348.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147) YP_006290349.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006290350.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290353.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_006290354.1 PFAM: EAL domain YP_006290355.1 PFAM: EamA-like transporter family YP_006290356.1 PFAM: AsnC family YP_006290357.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_006290358.1 PFAM: Acetyltransferase (GNAT) family YP_006290359.1 PFAM: Domain of unknown function (DUF3470); 4Fe-4S binding domain YP_006290360.1 PFAM: Peptidase M15 YP_006290361.1 PFAM: O-methyltransferase YP_006290362.1 PFAM: Universal stress protein family YP_006290363.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006290364.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_006290365.1 PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family YP_006290366.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ATPase, LssB family YP_006290367.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006290368.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter YP_006290369.1 PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_006290370.1 PFAM: Protein of unknown function (DUF1239) YP_006290371.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_006290372.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_006290373.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_006290378.1 PFAM: HxlR-like helix-turn-helix YP_006290379.1 PFAM: Major Facilitator Superfamily YP_006290380.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_006290384.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_006290386.1 PFAM: 'Cold-shock' DNA-binding domain YP_006290387.1 PFAM: LysE type translocator YP_006290388.1 PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_006290391.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_006290393.1 PFAM: Exonuclease VII, large subunit YP_006290396.1 PFAM: LysE type translocator YP_006290398.1 PFAM: Domain of Unknown Function (DUF326) YP_006290399.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_006290400.1 PFAM: MerR, DNA binding; MerR family regulatory protein; TIGRFAM: Cu(I)-responsive transcriptional regulator YP_006290401.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_006290402.1 PFAM: Heavy-metal-associated domain YP_006290403.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290404.1 PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain; TIGRFAM: benzoate 1,2-dioxygenase, large subunit YP_006290405.1 PFAM: Ring hydroxylating beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit YP_006290406.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006290407.1 PFAM: short chain dehydrogenase YP_006290408.1 PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter YP_006290409.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006290410.1 PFAM: outer membrane porin, OprD family YP_006290411.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_006290412.1 PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); Domain of unknown function (DUF1605); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpA YP_006290413.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin YP_006290415.1 PFAM: O-methyltransferase YP_006290416.1 PFAM: Protein of unknown function (DUF1653) YP_006290417.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit YP_006290419.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006290420.1 PFAM: Endonuclease/Exonuclease/phosphatase family YP_006290421.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase YP_006290422.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006290423.1 PFAM: Domain of unknown function (DUF2520); NADP oxidoreductase coenzyme F420-dependent YP_006290424.1 PFAM: OmpA family YP_006290425.1 TIGRFAM: dihydroorotase, multifunctional complex type YP_006290426.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_006290428.1 PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain YP_006290430.1 PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain YP_006290431.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_006290432.1 PFAM: Peptidase family M23 YP_006290433.1 PFAM: Acetyltransferase (GNAT) family YP_006290434.1 PFAM: OsmC-like protein YP_006290435.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_006290438.1 PFAM: Aldo/keto reductase family YP_006290439.1 PFAM: Peptidase family M48 YP_006290441.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_006290442.1 TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit YP_006290443.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_006290444.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_006290445.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_006290446.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_006290447.1 PFAM: Ribonuclease HII YP_006290449.1 PFAM: Cytochrome b(N-terminal)/b6/petB YP_006290450.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_006290451.1 PFAM: Permease family YP_006290453.1 PFAM: Flavin-binding monooxygenase-like YP_006290454.1 PFAM: short chain dehydrogenase YP_006290455.1 PFAM: Predicted metal-dependent hydrolase YP_006290456.1 PFAM: Pirin YP_006290457.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290458.1 PFAM: Predicted metal-dependent hydrolase YP_006290459.1 PFAM: short chain dehydrogenase YP_006290460.1 PFAM: Flavin-binding monooxygenase-like YP_006290461.1 PFAM: Transposase IS66 family YP_006290463.1 PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase YP_006290464.1 PFAM: EAL domain; Domain of unknown function (DUF3330) YP_006290465.1 PFAM: Phage integrase family; TIGRFAM: integron integrase YP_006290466.1 PFAM: Acetyltransferase (GNAT) family YP_006290467.1 PFAM: Acetyltransferase (GNAT) family YP_006290468.1 PFAM: Acetyltransferase (GNAT) family YP_006290469.1 PFAM: Nucleotidyltransferase domain YP_006290470.1 PFAM: Small Multidrug Resistance protein YP_006290471.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006290474.1 PFAM: Integrase core domain YP_006290475.1 PFAM: Resolvase, N terminal domain YP_006290476.1 PFAM: Transposase YP_006290477.1 PFAM: Transposase IS66 family YP_006290479.1 PFAM: Arginine N-succinyltransferase beta subunit; TIGRFAM: arginine N-succinyltransferase; arginine and ornithine succinyltransferase subunits YP_006290480.1 PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine transaminases YP_006290481.1 PFAM: HTH domain; AsnC family YP_006290482.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: 1-pyrroline dehydrogenase YP_006290484.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006290485.1 PFAM: Cache domain YP_006290486.1 PFAM: Amino acid permease YP_006290487.1 PFAM: FAD dependent oxidoreductase YP_006290488.1 PFAM: Amino acid permease YP_006290493.1 PFAM: Sel1 repeat YP_006290494.1 PFAM: Sel1 repeat YP_006290495.1 PFAM: Sel1 repeat YP_006290496.1 PFAM: RHS protein; RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_006290497.1 PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein YP_006290498.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290500.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_006290501.1 PFAM: Bacterial protein of unknown function (DUF898) YP_006290502.1 PFAM: Peptidase family M48 YP_006290503.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family YP_006290504.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_006290505.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006290506.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type YP_006290507.1 PFAM: Exonuclease; TIGRFAM: ribonuclease T YP_006290508.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_006290509.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family YP_006290510.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region YP_006290511.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006290512.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006290513.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_006290514.1 PFAM: Transglycosylase SLT domain; LysM domain YP_006290515.1 PFAM: RNase H; Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial YP_006290517.1 PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain YP_006290518.1 PFAM: alpha/beta hydrolase fold YP_006290519.1 PFAM: Putative phospholipid-binding domain YP_006290520.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_006290521.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_006290523.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: transcriptional regulator, ArgP family YP_006290524.1 PFAM: LysE type translocator; TIGRFAM: L-lysine exporter YP_006290525.1 PFAM: Cation efflux family YP_006290526.1 PFAM: MerR, DNA binding; MerR family regulatory protein YP_006290528.1 PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_006290529.1 PFAM: FAD binding domain; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_006290530.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24 YP_006290531.1 PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein YP_006290533.1 PFAM: Cell division protein ZapA YP_006290534.1 PFAM: Phage integrase family YP_006290537.1 PFAM: Phage lysozyme YP_006290543.1 PFAM: Domain of unknown function (DUF1833) YP_006290545.1 PFAM: Transglycosylase SLT domain YP_006290550.1 PFAM: Protein of unknown function (DUF3168) YP_006290551.1 PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family YP_006290552.1 PFAM: Phage head-tail joining protein; TIGRFAM: phage head-tail adaptor, putative, SPP1 family YP_006290555.1 PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family YP_006290556.1 PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family YP_006290557.1 PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family YP_006290558.1 PFAM: Phage Terminase YP_006290560.1 PFAM: Terminase small subunit YP_006290569.1 PFAM: Phage antitermination protein Q YP_006290576.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_006290580.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_006290588.1 PFAM: Phage integrase family YP_006290591.1 PFAM: Sulfatase; Domain of unknown function (DUF1705) YP_006290592.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain YP_006290593.1 PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_006290597.1 PFAM: Domain of unknown function (DUF1833) YP_006290600.1 TIGRFAM: tape measure domain YP_006290609.1 PFAM: Bacterial SH3 domain YP_006290624.1 PFAM: Phage Mu protein F like protein; TIGRFAM: phage putative head morphogenesis protein, SPP1 gp7 family YP_006290626.1 PFAM: Terminase-like family YP_006290627.1 PFAM: Uncharacterized conserved protein (DUF2280) YP_006290638.1 PFAM: Protein of unknown function (DUF559) YP_006290642.1 PFAM: Bacteriophage replication protein O YP_006290646.1 PFAM: Helix-turn-helix; Peptidase S24-like YP_006290664.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_006290665.1 PFAM: SmpA / OmlA family; OmpA family YP_006290666.1 PFAM: Hep_Hag; YadA-like C-terminal region; Haemagglutinin YP_006290667.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_006290668.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_006290669.1 PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase YP_006290670.1 PFAM: META domain YP_006290671.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain YP_006290672.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_006290673.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_006290674.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_006290677.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_006290678.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_006290679.1 PFAM: HupE / UreJ protein YP_006290680.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG YP_006290681.1 PFAM: UreF YP_006290682.1 PFAM: UreE urease accessory protein, N-terminal domain; UreE urease accessory protein, C-terminal domain YP_006290683.1 PFAM: Amidohydrolase family; Urease alpha-subunit, N-terminal domain; TIGRFAM: urease, alpha subunit YP_006290684.1 PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit YP_006290685.1 PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit YP_006290686.1 PFAM: UreD urease accessory protein YP_006290688.1 PFAM: Uncharacterized lipoprotein NlpE involved in copper resistance YP_006290689.1 PFAM: Isocitrate lyase family; TIGRFAM: isocitrate lyase YP_006290690.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290691.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain YP_006290692.1 PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family YP_006290694.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2239) YP_006290695.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain YP_006290696.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit YP_006290699.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_006290700.1 PFAM: Uncharacterised protein family (UPF0227) YP_006290701.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein YP_006290702.1 PFAM: Rubredoxin YP_006290703.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006290705.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290706.1 PFAM: Sporulation related domain YP_006290707.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1 YP_006290708.1 PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase YP_006290709.1 PFAM: Rhomboid family YP_006290710.1 PFAM: Predicted permease YP_006290711.1 PFAM: ABC transporter YP_006290712.1 PFAM: GDSL-like Lipase/Acylhydrolase YP_006290713.1 PFAM: Carbonic anhydrase YP_006290716.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006290717.1 PFAM: Iron-sulphur cluster biosynthesis; NifU-like domain; TIGRFAM: IscR-regulated protein YhgI YP_006290718.1 PFAM: Rhomboid family YP_006290719.1 PFAM: Sulfatase YP_006290720.1 PFAM: Formylglycine-generating sulfatase enzyme YP_006290723.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: D-serine ammonia-lyase YP_006290724.1 PFAM: Phosphate transporter family YP_006290725.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase YP_006290726.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_006290727.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_006290728.1 PFAM: Major Facilitator Superfamily; TIGRFAM: D-galactonate transporter YP_006290729.1 PFAM: short chain dehydrogenase YP_006290730.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290732.1 PFAM: Aldose 1-epimerase YP_006290733.1 PFAM: Major Facilitator Superfamily YP_006290735.1 PFAM: Glutaminase; TIGRFAM: glutaminase A YP_006290736.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_006290737.1 PFAM: Major Facilitator Superfamily YP_006290739.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_006290740.1 PFAM: Aldehyde dehydrogenase family YP_006290741.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Domain of unknown function DUF108 YP_006290742.1 PFAM: short chain dehydrogenase YP_006290744.1 PFAM: Cupin domain YP_006290745.1 PFAM: Major Facilitator Superfamily YP_006290746.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_006290747.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily YP_006290748.1 PFAM: short chain dehydrogenase YP_006290749.1 PFAM: Rieske [2Fe-2S] domain YP_006290751.1 PFAM: Rieske [2Fe-2S] domain YP_006290752.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006290754.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC YP_006290755.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006290756.1 TIGRFAM: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD YP_006290757.1 PFAM: Glycosyl transferase family 2; TIGRFAM: poly-beta-1,6 N-acetyl-D-glucosamine synthase YP_006290758.1 PFAM: Polysaccharide deacetylase; TIGRFAM: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB YP_006290759.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_006290760.1 PFAM: YaeQ protein YP_006290761.1 PFAM: Sodium:dicarboxylate symporter family YP_006290762.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain YP_006290764.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006290765.1 PFAM: MarC family integral membrane protein YP_006290766.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006290767.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006290768.1 PFAM: Bacterial regulatory proteins, tetR family; TIGRFAM: transcriptional repressor BetI YP_006290769.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase YP_006290770.1 PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase YP_006290771.1 PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase YP_006290773.1 PFAM: Homocysteine S-methyltransferase YP_006290774.1 PFAM: Amino acid permease; TIGRFAM: transporter, basic amino acid/polyamine antiporter (APA) family YP_006290776.1 PFAM: Protein of unknown function (DUF1275) YP_006290778.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290779.1 PFAM: Dihydrodipicolinate synthetase family YP_006290780.1 PFAM: Sugar (and other) transporter YP_006290781.1 PFAM: outer membrane porin, OprD family YP_006290785.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_006290787.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase YP_006290788.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; Multidrug resistance protein YP_006290789.1 PFAM: HlyD family secretion protein; TIGRFAM: efflux pump membrane protein (multidrug resistance protein A) YP_006290790.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1 YP_006290791.1 PFAM: Delta-aminolevulinic acid dehydratase YP_006290792.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO YP_006290793.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein YP_006290796.1 PFAM: OsmC-like protein YP_006290797.1 PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD YP_006290799.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_006290800.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006290801.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_006290802.1 PFAM: Ferric uptake regulator family YP_006290803.1 PFAM: SmpA / OmlA family YP_006290804.1 PFAM: Uncharacterised protein family (UPF0125) YP_006290806.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_006290807.1 PFAM: Glutamine amidotransferases class-II YP_006290809.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_006290810.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006290811.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_006290812.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep YP_006290814.1 PFAM: OmpA family YP_006290815.1 PFAM: Acyltransferase YP_006290817.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC YP_006290818.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_006290819.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_006290822.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein YP_006290823.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_006290824.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_006290825.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_006290826.1 PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus YP_006290827.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_006290828.1 PFAM: Predicted metal-dependent hydrolase YP_006290829.1 PFAM: Predicted metal-dependent hydrolase YP_006290830.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_006290831.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_006290832.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_006290833.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_006290835.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_006290836.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein YP_006290837.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_006290839.1 PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase YP_006290841.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006290842.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase YP_006290843.1 PFAM: Rieske [2Fe-2S] domain YP_006290844.1 PFAM: alpha/beta hydrolase fold YP_006290845.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_006290846.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: tartrate dehydrogenase YP_006290847.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290850.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_006290851.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_006290852.1 PFAM: NADPH-dependent FMN reductase YP_006290853.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_006290854.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_006290855.1 TIGRFAM: outer membrane assembly lipoprotein YfiO YP_006290856.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_006290857.1 PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_006290859.1 PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB YP_006290860.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_006290861.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_006290862.1 PFAM: Ribosomal L25p family YP_006290863.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_006290864.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_006290866.1 PFAM: Predicted membrane protein (DUF2157) YP_006290867.1 PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_006290868.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_006290869.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_006290870.1 PFAM: Putative phospholipid-binding domain; LysM domain YP_006290871.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_006290872.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_006290873.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_006290874.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_006290875.1 PFAM: Uncharacterized ACR, COG1399 YP_006290876.1 PFAM: Protein of unknown function, DUF462 YP_006290877.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_006290878.1 PFAM: ScpA/B protein YP_006290879.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_006290880.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_006290881.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase YP_006290882.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC YP_006290883.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase YP_006290884.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_006290886.1 PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB YP_006290887.1 PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming] YP_006290888.1 PFAM: Major Facilitator Superfamily YP_006290889.1 PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin YP_006290890.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_006290891.1 PFAM: ZipA, C-terminal FtsZ-binding domain YP_006290892.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type YP_006290893.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006290894.1 PFAM: Sulfite exporter TauE/SafE YP_006290895.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_006290896.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_006290897.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein YP_006290898.1 PFAM: Dihydrouridine synthase (Dus) YP_006290904.1 PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase YP_006290905.1 PFAM: LysE type translocator YP_006290906.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062) YP_006290907.1 PFAM: Phosphorylase superfamily YP_006290908.1 PFAM: ParA/MinD ATPase like; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family YP_006290910.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_006290912.1 PFAM: LysE type translocator YP_006290913.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290914.1 PFAM: Major Facilitator Superfamily YP_006290915.1 PFAM: HlyD family secretion protein YP_006290916.1 PFAM: Pyridoxal-phosphate dependent enzyme YP_006290917.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_006290919.1 PFAM: Conserved TM helix YP_006290922.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006290923.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290924.1 PFAM: 'Cold-shock' DNA-binding domain YP_006290925.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_006290926.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N YP_006290927.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M YP_006290928.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L YP_006290929.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006290930.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_006290931.1 TIGRFAM: NADH-quinone oxidoreductase, chain I YP_006290932.1 PFAM: NADH dehydrogenase YP_006290933.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G YP_006290934.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit YP_006290935.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_006290936.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C YP_006290937.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit YP_006290938.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_006290939.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006290941.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006290942.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_006290943.1 PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_006290945.1 PFAM: Ribonucleotide reductase, small chain YP_006290946.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_006290948.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_006290951.1 TIGRFAM: phage-associated protein, BcepMu gp16 family YP_006290952.1 PFAM: TnsA endonuclease N terminal YP_006290953.1 PFAM: Integrase core domain YP_006290960.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family YP_006290964.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family YP_006290965.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290967.1 PFAM: Archaeal ATPase; Restriction endonuclease YP_006290968.1 PFAM: Bacterial regulatory proteins, tetR family YP_006290969.1 PFAM: Flavin reductase like domain YP_006290970.1 PFAM: Cobalamin-independent synthase, Catalytic domain YP_006290971.1 PFAM: Domain of unknown function (DUF1852) YP_006290972.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290973.1 PFAM: LysE type translocator YP_006290974.1 PFAM: Fatty acid desaturase YP_006290976.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_006290977.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_006290978.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290979.1 PFAM: Sugar (and other) transporter; TIGRFAM: metabolite-proton symporter YP_006290980.1 PFAM: Bacterial extracellular solute-binding protein YP_006290981.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006290982.1 PFAM: FAD binding domain; TIGRFAM: precorrin 3B synthase CobZ YP_006290983.1 TIGRFAM: CitB domain protein YP_006290984.1 PFAM: CoA-transferase family III YP_006290985.1 PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport YP_006290986.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006290987.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006290988.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase YP_006290989.1 PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase YP_006290990.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_006290991.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_006290992.1 PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006290993.1 PFAM: Small Multidrug Resistance protein YP_006290994.1 PFAM: Cation efflux family YP_006290995.1 PFAM: Copper resistance protein B precursor (CopB) YP_006290996.1 PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family YP_006290998.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_006290999.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_006291000.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2218) YP_006291001.1 PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase YP_006291002.1 PFAM: Peptidase C13 family YP_006291003.1 PFAM: Protein of unknown function (DUF548) YP_006291004.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_006291005.1 PFAM: Bacterial transferase hexapeptide (three repeats) YP_006291006.1 PFAM: NUDIX domain YP_006291007.1 PFAM: NUDIX domain YP_006291010.1 PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX) YP_006291013.1 PFAM: chorismate binding enzyme YP_006291014.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_006291015.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_006291016.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_006291017.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_006291018.1 PFAM: BolA-like protein YP_006291019.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_006291020.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_006291021.1 PFAM: VacJ like lipoprotein YP_006291022.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_006291023.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor YP_006291024.1 PFAM: Carbon-nitrogen hydrolase YP_006291026.1 PFAM: MarR family YP_006291027.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily YP_006291028.1 PFAM: Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E YP_006291030.1 PFAM: Mechanosensitive ion channel YP_006291031.1 PFAM: Predicted membrane protein (DUF2339) YP_006291032.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_006291033.1 PFAM: YGGT family YP_006291034.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_006291035.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_006291036.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_006291037.1 PFAM: HD domain; Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase YP_006291038.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_006291039.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_006291041.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit YP_006291042.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_006291043.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_006291045.1 PFAM: Acetyltransferase (GNAT) family YP_006291046.1 PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused YP_006291047.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_006291048.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_006291049.1 PFAM: Bacterial protein of unknown function (DUF894) YP_006291050.1 PFAM: SNARE associated Golgi protein YP_006291051.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006291052.1 PFAM: Translation initiation factor IF-3, C-terminal domain; TIGRFAM: translation initiation factor IF-3 YP_006291053.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_006291054.1 PFAM: AMP-binding enzyme YP_006291055.1 PFAM: Protein of unknown function (DUF615) YP_006291056.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_006291057.1 PFAM: P-loop ATPase protein family YP_006291058.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_006291059.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_006291060.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_006291061.1 PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase YP_006291062.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_006291063.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_006291064.1 PFAM: short chain dehydrogenase YP_006291065.1 PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_006291066.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_006291067.1 PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB YP_006291068.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B YP_006291069.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain YP_006291070.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006291071.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase YP_006291072.1 PFAM: Xylose isomerase-like TIM barrel YP_006291073.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_006291074.1 PFAM: short chain dehydrogenase YP_006291075.1 PFAM: NAD(P) transhydrogenase beta subunit YP_006291077.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit YP_006291078.1 PFAM: EamA-like transporter family YP_006291079.1 PFAM: Endoribonuclease L-PSP YP_006291080.1 PFAM: Major Facilitator Superfamily YP_006291081.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A YP_006291083.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006291084.1 PFAM: ThiF family YP_006291085.1 PFAM: Endoribonuclease L-PSP YP_006291086.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1 YP_006291087.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_006291088.1 PFAM: Protein of unknown function (DUF3298) YP_006291089.1 PFAM: Protein of unknown function (DUF3298) YP_006291090.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; peptide chain release factor 3 YP_006291092.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291093.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291094.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_006291095.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_006291096.1 PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit YP_006291097.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_006291099.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_006291100.1 PFAM: Rare lipoprotein B family YP_006291101.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_006291102.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_006291103.1 PFAM: ABC transporter; Predicted permease YP_006291104.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_006291105.1 PFAM: short chain dehydrogenase YP_006291107.1 PFAM: Exonuclease YP_006291108.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_006291109.1 PFAM: Rhodanese-like domain YP_006291110.1 PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family YP_006291111.1 PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB YP_006291112.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain YP_006291114.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_006291115.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative YP_006291117.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain YP_006291118.1 PFAM: Protein of unknown function (DUF3261) YP_006291119.1 PFAM: FAD binding domain YP_006291121.1 PFAM: Outer membrane lipoprotein carrier protein LolA YP_006291122.1 TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_006291123.1 PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase YP_006291124.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_006291125.1 PFAM: Glycosyl transferase family 2 YP_006291126.1 PFAM: AMP-binding enzyme YP_006291127.1 PFAM: Intracellular septation protein A YP_006291128.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_006291129.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_006291130.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_006291132.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_006291133.1 PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL YP_006291134.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2133) YP_006291135.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_006291136.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_006291138.1 TIGRFAM: type IV pilus biogenesis/stability protein PilW YP_006291139.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_006291140.1 PFAM: Nucleoside diphosphate kinase YP_006291141.1 PFAM: Protein of unknown function (DUF528); TIGRFAM: FeS assembly protein IscX YP_006291142.1 PFAM: PAP2 superfamily YP_006291143.1 PFAM: Glycosyl transferases group 1 YP_006291144.1 PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_006291145.1 PFAM: Glycosyl hydrolase family 3 N terminal domain YP_006291146.1 PFAM: Leucine carboxyl methyltransferase YP_006291148.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_006291149.1 PFAM: Aldehyde dehydrogenase family YP_006291150.1 PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family YP_006291151.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_006291152.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_006291153.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; 6-phosphogluconate dehydratase YP_006291154.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_006291155.1 PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_006291156.1 PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_006291157.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2059) YP_006291158.1 PFAM: Protein of unknown function (DUF2846) YP_006291159.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_006291160.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_006291161.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_006291162.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor YP_006291163.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_006291164.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, yeast type YP_006291165.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase YP_006291166.1 PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW YP_006291167.1 PFAM: Sel1 repeat YP_006291168.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_006291170.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family YP_006291171.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB YP_006291172.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC YP_006291173.1 PFAM: Bacterial protein of unknown function (DUF839) YP_006291174.1 PFAM: Bacterial protein of unknown function (DUF839) YP_006291175.1 PFAM: Protein of unknown function (DUF833) YP_006291176.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_006291179.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase YP_006291180.1 PFAM: Dihydrofolate reductase YP_006291182.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_006291183.1 PFAM: Biopolymer transport protein ExbD/TolR YP_006291184.1 PFAM: MotA/TolQ/ExbB proton channel family YP_006291185.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_006291186.1 PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase YP_006291187.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291188.1 PFAM: Aldehyde dehydrogenase family YP_006291189.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_006291190.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_006291191.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family YP_006291195.1 PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) YP_006291196.1 PFAM: UvrD/REP helicase YP_006291199.1 PFAM: Toprim domain; Topoisomerase I zinc-ribbon-like; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_006291201.1 PFAM: HxlR-like helix-turn-helix YP_006291202.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein YP_006291203.1 PFAM: SlyX YP_006291204.1 PFAM: ABC transporter YP_006291205.1 PFAM: LysE type translocator YP_006291206.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase YP_006291207.1 PFAM: Glycosyl transferases group 1 YP_006291208.1 PFAM: Sodium:dicarboxylate symporter family YP_006291210.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial YP_006291213.1 PFAM: Asparaginase YP_006291214.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_006291216.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: intein N-terminal splicing region; translation initiation factor IF-1 YP_006291217.1 PFAM: Protein of unknown function (DUF1311) YP_006291219.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_006291221.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_006291222.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit YP_006291223.1 PFAM: Predicted membrane protein (DUF2061) YP_006291224.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006291227.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like YP_006291228.1 PFAM: NUDIX domain; TIGRFAM: mutator mutT protein YP_006291229.1 PFAM: GAF domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_006291230.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI YP_006291232.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006291233.1 PFAM: Protein of unknown function (DUF1345) YP_006291234.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006291235.1 PFAM: HTH domain YP_006291236.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_006291237.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_006291238.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family YP_006291239.1 PFAM: AMP-binding enzyme YP_006291240.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_006291241.1 PFAM: short chain dehydrogenase YP_006291242.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_006291243.1 PFAM: Protein of unknown function, DUF606 YP_006291244.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_006291245.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain YP_006291246.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; TIGRFAM: sulfur acquisition oxidoreductase, SfnB family YP_006291247.1 PFAM: ABC1 family YP_006291248.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_006291249.1 PFAM: HopJ type III effector protein YP_006291250.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_006291251.1 PFAM: Glutathione-dependent formaldehyde-activating enzyme YP_006291252.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family YP_006291253.1 PFAM: Putative methyltransferase YP_006291254.1 PFAM: Domain of unknown function (DUF329) YP_006291255.1 PFAM: Metallo-beta-lactamase superfamily YP_006291256.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase YP_006291258.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_006291259.1 PFAM: Protein of unknown function (DUF1285) YP_006291260.1 PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; Thi4 family YP_006291261.1 PFAM: SirA-like protein YP_006291262.1 PFAM: CBS domain; Transporter associated domain YP_006291263.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_006291264.1 PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA YP_006291266.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_006291267.1 PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F YP_006291268.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N' YP_006291269.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family YP_006291270.1 PFAM: Hsp33 protein YP_006291271.1 PFAM: LysE type translocator YP_006291272.1 PFAM: DnaJ C terminal region; DnaJ domain YP_006291274.1 PFAM: CorA-like Mg2+ transporter protein YP_006291275.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_006291276.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_006291277.1 PFAM: Beta-lactamase YP_006291278.1 PFAM: Uncharacterized conserved protein (DUF2075); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit YP_006291279.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit YP_006291280.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_006291282.1 PFAM: Polyphosphate kinase 2 (PPK2) YP_006291284.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases YP_006291286.1 PFAM: ABC1 family YP_006291287.1 PFAM: FAD binding domain YP_006291288.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_006291289.1 PFAM: UvrD/REP helicase YP_006291291.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter YP_006291292.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_006291293.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains YP_006291294.1 PFAM: Na+/H+ ion antiporter subunit YP_006291295.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF) YP_006291296.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit YP_006291297.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_006291298.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_006291299.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication YP_006291300.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_006291301.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_006291302.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_006291303.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB YP_006291304.1 PFAM: Bacterial type II secretion system protein F domain YP_006291305.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_006291306.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_006291307.1 PFAM: EamA-like transporter family YP_006291308.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_006291309.1 PFAM: Protein of unknown function (DUF1255) YP_006291311.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_006291312.1 PFAM: Uncharacterized ACR, COG1678 YP_006291313.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_006291314.1 PFAM: HlyD family secretion protein YP_006291315.1 PFAM: Protein of unknown function (DUF1656) YP_006291316.1 PFAM: Fusaric acid resistance protein family YP_006291317.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_006291318.1 PFAM: 2OG-Fe(II) oxygenase superfamily YP_006291319.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase YP_006291320.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_006291322.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_006291326.1 PFAM: Aspartyl/Asparaginyl beta-hydroxylase YP_006291327.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadB YP_006291328.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadA YP_006291331.1 PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234) YP_006291332.1 PFAM: MerR family regulatory protein YP_006291334.1 PFAM: DSBA-like thioredoxin domain YP_006291337.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_006291338.1 PFAM: Protein of unknown function (DUF1311) YP_006291339.1 PFAM: OmpW family YP_006291340.1 PFAM: Na+/H+ antiporter family YP_006291345.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_006291346.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_006291347.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_006291348.1 PFAM: Ribosomal protein L10 YP_006291349.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_006291350.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_006291351.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG YP_006291352.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_006291353.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_006291354.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages YP_006291355.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_006291356.1 PFAM: FHA domain YP_006291357.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D YP_006291358.1 TIGRFAM: general secretion pathway protein C YP_006291359.1 PFAM: Bacterial type II secretion system protein N YP_006291360.1 PFAM: H-NS histone family YP_006291361.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family YP_006291364.1 PFAM: Uroporphyrinogen-III synthase HemD YP_006291365.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_006291366.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_006291367.1 PFAM: Histidine kinase YP_006291368.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_006291369.1 PFAM: Bacterial Fe(2+) trafficking YP_006291370.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_006291371.1 PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family YP_006291372.1 PFAM: EamA-like transporter family YP_006291373.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291375.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_006291376.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family YP_006291377.1 PFAM: Calcineurin-like phosphoesterase YP_006291378.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA YP_006291379.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase YP_006291380.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW YP_006291381.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_006291383.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB YP_006291384.1 PFAM: FeoA domain YP_006291385.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD YP_006291386.1 PFAM: Disulfide bond isomerase protein N-terminus YP_006291387.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain YP_006291388.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_006291389.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_006291390.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family YP_006291391.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_006291392.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain YP_006291393.1 PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc) YP_006291394.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_006291395.1 PFAM: Predicted permease YjgP/YjgQ family YP_006291396.1 PFAM: Predicted permease YjgP/YjgQ family YP_006291397.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain YP_006291398.1 PFAM: DNA polymerase III chi subunit, HolC YP_006291401.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_006291402.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_006291403.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD YP_006291404.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_006291405.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_006291406.1 PFAM: Nitrogen regulatory protein P-II YP_006291407.1 PFAM: Protein of unknown function (DUF526) YP_006291408.1 PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein YP_006291410.1 PFAM: Phosphotransferase enzyme family YP_006291411.1 PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase YP_006291413.1 PFAM: Putative transposase YP_006291415.1 PFAM: Tetracyclin repressor, C-terminal all-alpha domain; Bacterial regulatory proteins, tetR family YP_006291416.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein YP_006291418.1 PFAM: Sulfate transporter family; STAS domain YP_006291419.1 PFAM: Universal stress protein family YP_006291424.1 PFAM: Bacterial TniB protein YP_006291425.1 PFAM: Integrase core domain YP_006291426.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal YP_006291427.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006291428.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_006291432.1 PFAM: Integrase core domain YP_006291433.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal YP_006291437.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_006291439.1 PFAM: Zeta toxin YP_006291443.1 PFAM: Sulfate transporter family; STAS domain YP_006291444.1 PFAM: Universal stress protein family YP_006291447.1 PFAM: Bacterial TniB protein YP_006291448.1 PFAM: Integrase core domain YP_006291449.1 PFAM: TnsA endonuclease N terminal; TnsA endonuclease C terminal YP_006291450.1 PFAM: Magnesium chelatase, subunit ChlI YP_006291451.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_006291452.1 PFAM: Class II Aldolase and Adducin N-terminal domain YP_006291453.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_006291454.1 PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial YP_006291456.1 PFAM: outer membrane porin, OprD family YP_006291457.1 PFAM: Inorganic pyrophosphatase YP_006291458.1 PFAM: MAPEG family YP_006291460.1 PFAM: AMP-binding enzyme YP_006291461.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial YP_006291462.1 PFAM: Sugar (and other) transporter; TIGRFAM: benzoate transport YP_006291463.1 PFAM: UPF0126 domain YP_006291464.1 PFAM: SEC-C motif YP_006291465.1 PFAM: CBS domain; Integral membrane protein TerC family; Transporter associated domain YP_006291466.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein YP_006291467.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily YP_006291468.1 PFAM: Glycosyl hydrolases family 25 YP_006291469.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family YP_006291470.1 PFAM: Endoribonuclease L-PSP YP_006291471.1 PFAM: Protein of unknown function (DUF2726) YP_006291472.1 PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ YP_006291474.1 PFAM: MerR family regulatory protein; MerR, DNA binding YP_006291475.1 PFAM: Protein of unknown function (DUF2938) YP_006291476.1 PFAM: NADPH-dependent FMN reductase YP_006291477.1 PFAM: Transglycosylase SLT domain YP_006291478.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_006291479.1 PFAM: Acetyltransferase (GNAT) family YP_006291480.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291483.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor YP_006291484.1 PFAM: Protein of unknown function (DUF2946) YP_006291485.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_006291486.1 PFAM: LysM domain YP_006291487.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_006291488.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_006291489.1 PFAM: EamA-like transporter family YP_006291490.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291491.1 PFAM: Major Facilitator Superfamily YP_006291493.1 PFAM: Glutathione peroxidase YP_006291495.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_006291496.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit YP_006291497.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_006291498.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_006291499.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_006291500.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_006291501.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_006291502.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_006291503.1 PFAM: ATP synthase I chain YP_006291504.1 PFAM: Periplasmic solute binding protein family YP_006291505.1 PFAM: Ferric uptake regulator family YP_006291506.1 PFAM: ABC transporter YP_006291507.1 PFAM: ABC 3 transport family YP_006291508.1 PFAM: LysE type translocator YP_006291509.1 PFAM: Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase family YP_006291510.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_006291511.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_006291512.1 PFAM: Sporulation related domain YP_006291513.1 PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain YP_006291514.1 PFAM: OsmC-like protein YP_006291515.1 PFAM: Pirin C-terminal cupin domain; Pirin YP_006291517.1 PFAM: Transcriptional regulator PadR-like family YP_006291518.1 PFAM: Nucleotidyltransferase domain YP_006291519.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_006291520.1 PFAM: Protein of unknown function (DUF445) YP_006291521.1 PFAM: DoxX YP_006291522.1 PFAM: SNARE associated Golgi protein YP_006291523.1 PFAM: LysE type translocator YP_006291525.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006291526.1 PFAM: Invasion gene expression up-regulator, SirB YP_006291527.1 PFAM: BolA-like protein YP_006291528.1 PFAM: 4'-phosphopantetheinyl transferase superfamily YP_006291529.1 PFAM: NAD dependent epimerase/dehydratase family YP_006291531.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; MMPL family YP_006291532.1 PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; Condensation domain; TIGRFAM: amino acid adenylation domain YP_006291533.1 PFAM: Phosphopantetheine attachment site YP_006291534.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain YP_006291535.1 PFAM: AMP-binding enzyme YP_006291536.1 PFAM: Bacterial regulatory proteins, luxR family; Autoinducer binding domain YP_006291538.1 PFAM: Autoinducer synthetase YP_006291539.1 PFAM: MarR family YP_006291540.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase YP_006291541.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_006291543.1 PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain YP_006291544.1 PFAM: Phosphopantetheine attachment site; Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_006291545.1 PFAM: Major Facilitator Superfamily; TIGRFAM: metabolite-proton symporter YP_006291546.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006291547.1 PFAM: Enoyl-CoA hydratase/isomerase family YP_006291548.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain YP_006291549.1 PFAM: AMP-binding enzyme YP_006291550.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase YP_006291551.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_006291552.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006291553.1 PFAM: Amino acid permease YP_006291554.1 PFAM: Amino acid permease YP_006291555.1 PFAM: Endoribonuclease L-PSP YP_006291556.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_006291557.1 PFAM: FAD dependent oxidoreductase YP_006291558.1 PFAM: MarR family; AsnC family YP_006291559.1 PFAM: Protein of unknown function (DUF1624) YP_006291560.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor YP_006291562.1 PFAM: Protein of unknown function (DUF1260) YP_006291563.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family YP_006291564.1 PFAM: Protein of unknown function (DUF1003) YP_006291565.1 PFAM: Major Facilitator Superfamily YP_006291566.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291567.1 PFAM: short chain dehydrogenase YP_006291570.1 PFAM: Phage-related baseplate assembly protein; Uncharacterized protein conserved in bacteria (DUF2345); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein YP_006291571.1 PFAM: Sel1 repeat YP_006291577.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; aconitate hydratase 1 YP_006291578.1 PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II YP_006291579.1 PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase YP_006291580.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006291581.1 PFAM: Aminotransferase class I and II YP_006291582.1 PFAM: D-lactate dehydrogenase, membrane binding; FAD binding domain YP_006291583.1 PFAM: FMN-dependent dehydrogenase YP_006291584.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain YP_006291585.1 PFAM: L-lactate permease; TIGRFAM: L-lactate transport YP_006291586.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_006291587.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_006291588.1 PFAM: Phosphoglucose isomerase YP_006291589.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_006291590.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_006291591.1 PFAM: Bacterial sugar transferase YP_006291592.1 PFAM: Glycosyl transferase family 4 YP_006291593.1 PFAM: NAD dependent epimerase/dehydratase family YP_006291594.1 PFAM: Glycosyl transferases group 1 YP_006291595.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_006291596.1 PFAM: NAD dependent epimerase/dehydratase family YP_006291597.1 PFAM: Polysaccharide biosynthesis protein; Polysaccharide biosynthesis protein C-terminal; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase YP_006291598.1 PFAM: Glycosyl transferases group 1 YP_006291600.1 PFAM: Glycosyl transferases group 1 YP_006291603.1 PFAM: NAD dependent epimerase/dehydratase family YP_006291604.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_006291605.1 PFAM: Polysaccharide biosynthesis/export protein YP_006291606.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_006291607.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family YP_006291608.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_006291609.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase YP_006291610.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN YP_006291611.1 PFAM: N-acetylmuramoyl-L-alanine amidase YP_006291612.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_006291614.1 PFAM: Phosphoesterase family; Domain of unknown function (DUF756); TIGRFAM: phospholipase C, phosphocholine-specific, Pseudomonas-type YP_006291615.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_006291616.1 PFAM: Fatty acid desaturase YP_006291617.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain YP_006291618.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291619.1 PFAM: Bacterial regulatory proteins, tetR family YP_006291620.1 PFAM: DSBA-like thioredoxin domain YP_006291621.1 PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase YP_006291622.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic YP_006291623.1 PFAM: short chain dehydrogenase YP_006291624.1 PFAM: Domain of unknown function (DUF3315) YP_006291625.1 PFAM: Domain of unknown function (DUF3315) YP_006291626.1 PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase YP_006291627.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_006291628.1 PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_006291629.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent YP_006291630.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_006291631.1 PFAM: ABC transporter YP_006291632.1 PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region YP_006291633.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative YP_006291634.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein YP_006291635.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_006291636.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_006291637.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_006291638.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase YP_006291639.1 PFAM: NADPH-dependent FMN reductase YP_006291641.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_006291642.1 PFAM: alpha/beta hydrolase fold YP_006291645.1 PFAM: Metallo-beta-lactamase superfamily YP_006291646.1 PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family YP_006291647.1 PFAM: GrpE YP_006291648.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_006291649.1 PFAM: Matrixin YP_006291650.1 PFAM: Matrixin YP_006291652.1 PFAM: Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase YP_006291654.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_006291655.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_006291656.1 PFAM: Protein of unknown function, DUF486 YP_006291657.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase YP_006291658.1 PFAM: Bacterial low temperature requirement A protein (LtrA) YP_006291659.1 PFAM: PAP2 superfamily YP_006291660.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family YP_006291662.1 PFAM: Glutathionylspermidine synthase YP_006291663.1 PFAM: Rieske [2Fe-2S] domain YP_006291664.1 PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase YP_006291666.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_006291667.1 PFAM: Transglycosylase associated protein YP_006291668.1 PFAM: Disulfide bond isomerase protein N-terminus YP_006291669.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_006291670.1 PFAM: Uncharacterised BCR, COG1937 YP_006291671.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE YP_006291672.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain YP_006291673.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_006291674.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial YP_006291675.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; IMG reference gene:2510835003_SP YP_006291676.1 PFAM: N-6 DNA Methylase YP_006291681.1 PFAM: C-5 cytosine-specific DNA methylase YP_006291686.1 PFAM: H-NS histone family YP_006291689.1 PFAM: Staphylococcal nuclease homologue YP_006291696.1 PFAM: Protein of unknown function (DUF1173) YP_006291698.1 PFAM: Zeta toxin YP_006291700.1 PFAM: Primase C terminal 1 (PriCT-1); Replicase family YP_006291704.1 PFAM: Abi-like protein YP_006291705.1 PFAM: Transglycosylase SLT domain YP_006291706.1 PFAM: TraG-like protein, N-terminal region YP_006291707.1 PFAM: Conjugative relaxosome accessory transposon protein YP_006291708.1 TIGRFAM: TraF-like protein YP_006291709.1 PFAM: Mating pair stabilisation protein TraN YP_006291710.1 PFAM: Type-F conjugative transfer system pilin assembly protein; TIGRFAM: type-F conjugative transfer system pilin assembly protein TrbC YP_006291711.1 PFAM: TraU protein YP_006291712.1 TIGRFAM: type-F conjugative transfer system protein TraW YP_006291713.1 PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type YP_006291715.1 PFAM: F pilus assembly Type-IV secretion system for plasmid transfer; TIGRFAM: type-IV secretion system protein TraC YP_006291716.1 PFAM: Type IV conjugative transfer system lipoprotein (TraV); TIGRFAM: type IV conjugative transfer system lipoprotein TraV YP_006291717.1 PFAM: Disulfide bond isomerase protein N-terminus YP_006291718.1 PFAM: Bacterial conjugation TrbI-like protein YP_006291719.1 PFAM: TraK protein; TIGRFAM: type-F conjugative transfer system secretin TraK YP_006291720.1 PFAM: TraE protein; TIGRFAM: type IV conjugative transfer system protein TraE YP_006291721.1 PFAM: TraL protein; TIGRFAM: type IV conjugative transfer system protein TraL YP_006291724.1 PFAM: Transglycosylase SLT domain YP_006291729.1 PFAM: Resolvase, N terminal domain YP_006291734.1 TIGRFAM: PEP-CTERM protein sorting domain YP_006291737.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_006291742.1 PFAM: TrwC relaxase; PIF1 helicase; TIGRFAM: conjugative relaxase domain, TrwC/TraI family YP_006291743.1 PFAM: Type IV secretion-system coupling protein DNA-binding domain; TIGRFAM: type IV conjugative transfer system coupling protein TraD YP_006291747.1 PFAM: DnaJ domain YP_006291758.1 PFAM: Penicillin binding protein transpeptidase domain YP_006291760.1 PFAM: Protein of unknown function (DUF815) YP_006291763.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_006291764.1 PFAM: T5orf172 domain YP_006291781.1 PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins YP_006291782.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; IMG reference gene:2512891423_SP YP_007569993.1 phage tail tape measure protein, lambda family