-- dump date   	20140618_185346
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004232496.1	TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; KEGG: dia:Dtpsy_0001 chromosomal replication initiation protein; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core
YP_004232497.1	SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: dac:Daci_0002 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, C-terminal; DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central
YP_004232498.1	SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; manually curated; KEGG: ajs:Ajs_4146 DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal
YP_004232499.1	manually curated; KEGG: mca:MCA1886 hypothetical protein
YP_004232500.1	PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: dvu:DVU1709 type I restriction-modification system, M subunit
YP_004232501.1	PFAM: Abortive infection bacteriophage resistance-related; KEGG: mmw:Mmwyl1_0260 hypothetical protein
YP_004232502.1	KEGG: pst:PSPTO_0005 type I restriction-modification system, M subunit, putative; PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal
YP_004232503.1	PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: app:CAP2UW1_3123 type I restriction-modification enzyme, specificity subunit
YP_004232504.1	KEGG: pst:PSPTO_0007 hypothetical protein
YP_004232505.1	TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: pst:PSPTO_0008 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase, N-terminal
YP_004232506.1	PFAM: Protein of unknown function DUF45; KEGG: pst:PSPTO_0011 hypothetical protein
YP_004232507.1	PFAM: Domain of unknown function DUF262; Domain of unknown function DUF1524 RloF; KEGG: mea:Mex_p20010 hypothetical protein
YP_004232508.1	KEGG: bav:BAV3409 transcriptional regulator (sigma54-dependent regulator); PFAM: Regulator of RNA terminal phosphate cyclase; RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core
YP_004232509.1	PFAM: TROVE; KEGG: pfl:PFL_2303 60-kDa SS-A/Ro ribonucleoprotein
YP_004232510.1	PFAM: Uncharacterised protein family UPF0027; KEGG: dac:Daci_0678 hypothetical protein
YP_004232511.1	PFAM: Nucleotidyltransferase, predicted; KEGG: dac:Daci_0679 nucleotidyltransferase-like protein
YP_004232512.1	TIGRFAM: RNA 3'-terminal phosphate cyclase, subgroup; KEGG: dac:Daci_0680 RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase-like; RNA 3'-terminal phosphate cyclase, insert domain
YP_004232513.1	PFAM: Uncharacterised protein family UPF0153; KEGG: dia:Dtpsy_0006 protein of unknown function UPF0153
YP_004232514.1	KEGG: dac:Daci_3893 OsmC family protein; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; PFAM: Peroxiredoxin, OsmC-like protein
YP_004232515.1	KEGG: ajs:Ajs_4153 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004232516.1	KEGG: vap:Vapar_2035 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding
YP_004232517.1	KEGG: ajs:Ajs_4156 hypothetical protein
YP_004232518.1	KEGG: ajs:Ajs_4158 ATP-dependent DNA helicase DinG; PFAM: DEAD2; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal
YP_004232519.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dia:Dtpsy_0017 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004232520.1	KEGG: pna:Pnap_0004 hypothetical protein
YP_004232521.1	PFAM: Exonuclease, RNase T/DNA polymerase III; KEGG: ajs:Ajs_4160 DNA polymerase III, epsilon subunit; SMART: Exonuclease
YP_004232522.1	KEGG: dia:Dtpsy_0018 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR
YP_004232523.1	KEGG: rso:RS03064 hypothetical protein
YP_004232524.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rso:RS03065 transcription regulator protein
YP_004232525.1	SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: Yeast 2-isopropylmalate synthase; KEGG: reu:Reut_A1687 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004232526.1	PFAM: NLP/P60; KEGG: xtr:100489148 uncharacterized protein ydhO-like
YP_004232527.1	TIGRFAM: DHAP synthase, class 1; KEGG: dac:Daci_2040 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004232528.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; PAS fold-3; Diguanylate cyclase, predicted; GAF; KEGG: dia:Dtpsy_0021 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; GAF
YP_004232529.1	PFAM: Lipid A 3-O-deacylase-related; KEGG: ajs:Ajs_0006 hypothetical protein
YP_004232530.1	PFAM: Domain of unknown function DUF1520; KEGG: ajs:Ajs_0007 hypothetical protein
YP_004232531.1	PFAM: Putative exonuclease, RdgC; KEGG: ajs:Ajs_0008 recombination associated protein
YP_004232532.1	KEGG: ajs:Ajs_0012 nucleoside recognition domain-containing protein
YP_004232533.1	KEGG: ctt:CtCNB1_4397 hypothetical protein
YP_004232534.1	KEGG: xcv:XCV1504 putative secreted protein
YP_004232535.1	TIGRFAM: Thiolase; KEGG: dia:Dtpsy_0032 beta-ketothiolase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004232536.1	TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: ajs:Ajs_0017 MerR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004232537.1	PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_0018 heavy metal transport/detoxification protein
YP_004232538.1	TIGRFAM: ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: ajs:Ajs_0019 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004232539.1	KEGG: dia:Dtpsy_0038 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232540.1	manually curated; KEGG: bge:BC1002_0200 hypothetical protein
YP_004232541.1	manually curated; KEGG: reh:H16_B0507 hypothetical protein
YP_004232542.1	KEGG: meh:M301_0456 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004232543.1	KEGG: rme:Rmet_3837 heavy metal cation tricomponent efflux membrane fusion protein HmvB; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004232544.1	PFAM: Outer membrane efflux protein; KEGG: xtr:100485479 hypothetical protein LOC100485479
YP_004232545.1	KEGG: vap:Vapar_0036 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004232546.1	KEGG: vap:Vapar_0037 histidine kinase; PFAM: Two-component sensor kinase N-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232547.1	PFAM: NIPSNAP; KEGG: vap:Vapar_2502 NIPSNAP family containing protein
YP_004232548.1	KEGG: dia:Dtpsy_0040 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004232549.1	TIGRFAM: Taurine ABC transporter, periplasmic binding protein; KEGG: bxe:Bxe_C0087 ABC taurine transporter, periplasmic ligand binding protein
YP_004232550.1	PFAM: ABC transporter-like; KEGG: bph:Bphy_6081 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004232551.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rpi:Rpic_2883 binding-protein-dependent transport systems inner membrane component
YP_004232552.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dia:Dtpsy_0042 glutathione S-transferase domain protein
YP_004232553.1	PFAM: Uncharacterised protein family UPF0153; KEGG: mca:MCA0686 hypothetical protein
YP_004232554.1	PFAM: NADPH-dependent FMN reductase; KEGG: dia:Dtpsy_0044 NADPH-dependent FMN reductase
YP_004232555.1	KEGG: dia:Dtpsy_0045 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: Glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related
YP_004232556.1	TIGRFAM: rRNA small subunit methyltransferase G; HAMAP: rRNA small subunit methyltransferase G; KEGG: dia:Dtpsy_0046 16S rRNA methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G
YP_004232557.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: xtr:100490178 leucine efflux protein-like
YP_004232558.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dia:Dtpsy_0048 cobyrinic acid ac-diamide synthase
YP_004232559.1	PFAM: Protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein
YP_004232560.1	KEGG: ape:APE_1219.1 hypothetical protein
YP_004232561.1	TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: dac:Daci_0051 ParB-like partition protein; SMART: ParB-like nuclease
YP_004232562.1	KEGG: tcu:Tcur_0102 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004232563.1	PFAM: Protein of unknown function DUF1446; KEGG: reh:H16_B0988 hypothetical protein
YP_004232564.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: rmr:Rmar_2203 short-chain dehydrogenase/reductase SDR
YP_004232565.1	PFAM: Crotonase, core; KEGG: rpd:RPD_2206 enoyl-CoA hydratase
YP_004232566.1	PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; KEGG: vap:Vapar_0326 carbamoyl-phosphate synthase L chain ATP-binding; SMART: Biotin carboxylase, C-terminal
YP_004232567.1	KEGG: vap:Vapar_0327 methylcrotonoyl-CoA carboxylase; PFAM: Carboxyl transferase
YP_004232568.1	KEGG: ddf:DEFDS_0806 hypothetical protein
YP_004232569.1	TIGRFAM: Conserved hypothetical protein CHP03084; Conserved hypothetical protein CHP03083, actinobacterial-type; KEGG: dbr:Deba_2070 wyosine base formation
YP_004232570.1	KEGG: vap:Vapar_4941 transcriptional regulator, AraC family
YP_004232571.1	PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: sml:Smlt0642 putative transmembrane protein
YP_004232572.1	PFAM: GtrA-like protein; KEGG: rsc:RCFBP_21287 conserved membrane protein of unknown function
YP_004232573.1	PFAM: Amine oxidase; KEGG: meh:M301_1240 amine oxidase
YP_004232574.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: rsc:RCFBP_21285 putative NAD-dependent epimerase/dehydratase
YP_004232575.1	KEGG: dar:Daro_1707 hypothetical protein
YP_004232576.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_1708 short-chain dehydrogenase/reductase SDR
YP_004232577.1	KEGG: dar:Daro_1709 FAD linked oxidase, N-terminal; manually curated; PFAM: FAD linked oxidase, N-terminal
YP_004232578.1	PFAM: UbiA prenyltransferase; KEGG: dar:Daro_1710 hypothetical protein
YP_004232579.1	KEGG: ajs:Ajs_0032 methyltransferase type 12
YP_004232580.1	PFAM: Peptidoglycan binding-like; Curli production assembly/transport component CsgG; KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein
YP_004232581.1	PFAM: Carboxylesterase, type B; KEGG: azl:AZL_010950 carboxylesterase type B
YP_004232582.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: mpt:Mpe_B0473 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004232583.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: pna:Pnap_2162 cobalamin (vitamin B12) biosynthesis CbiX protein
YP_004232584.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; KEGG: azo:azo3531 precorrin-8X methylmutase
YP_004232585.1	KEGG: mpt:Mpe_B0476 cobalt-precorrin-6A synthase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiD; PFAM: Cobalamin (vitamin B12) biosynthesis CbiD
YP_004232586.1	TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: vap:Vapar_1020 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Tetrapyrrole methylase; Methyltransferase small
YP_004232587.1	KEGG: mpt:Mpe_B0478 precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; PFAM: Tetrapyrrole methylase
YP_004232588.1	PFAM: Cobalamin synthesis G N-terminal; Cobalamin biosynthesis central region; KEGG: mpt:Mpe_B0479 cobalamin biosynthesis protein
YP_004232589.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; KEGG: azo:azo3536 putative cobalamin (vitamin B12) biosynthesis CbiG protein, truncated
YP_004232590.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; KEGG: azo:azo3528 hypothetical protein
YP_004232591.1	PFAM: Tetrapyrrole methylase; manually curated; KEGG: mpt:Mpe_B0482 precorrin-3 C-17 methylase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core
YP_004232592.1	PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: pol:Bpro_2766 hypothetical protein
YP_004232593.1	PFAM: Protein of unknown function DUF2076; KEGG: xfm:Xfasm12_2035 hypothetical protein
YP_004232594.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cti:RALTA_B0453 putative transcription regulator protein, putative LysR substrate binding domain
YP_004232595.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: cti:RALTA_B0454 putative carboxymuconolactone decarboxylase protein
YP_004232596.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: amr:AM1_3889 antibiotic biosynthesis monooxygenase family protein
YP_004232597.1	KEGG: azc:AZC_3664 hypothetical protein
YP_004232598.1	KEGG: har:HEAR0765 hypothetical protein
YP_004232599.1	KEGG: rfr:Rfer_1051 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding
YP_004232600.1	KEGG: dia:Dtpsy_0054 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004232601.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ajs:Ajs_0039 major facilitator superfamily transporter
YP_004232602.1	KEGG: pfs:PFLU4228 hypothetical protein
YP_004232603.1	KEGG: mpd:MCP_1362 hypothetical protein
YP_004232604.1	manually curated; TIGRFAM: Peptidase C58, YopT; KEGG: bja:blr2140 hypothetical protein; PFAM: Peptidase C58, YopT/NopT
YP_004232605.1	PFAM: Polyketide cyclase/dehydrase; KEGG: scl:sce3872 putative cyclase/dehyrase
YP_004232606.1	PFAM: HNS-dependent expression A; KEGG: mch:Mchl_4137 acid-resistance protein
YP_004232607.1	KEGG: pct:PC1_2136 hypothetical protein
YP_004232608.1	PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: xau:Xaut_4737 isoprenylcysteine carboxyl methyltransferase
YP_004232609.1	KEGG: xca:xccb100_0104 hypothetical protein
YP_004232610.1	PFAM: Protein of unknown function DUF1010; KEGG: ajs:Ajs_3368 hypothetical protein
YP_004232611.1	KEGG: sno:Snov_0695 hypothetical protein
YP_004232612.1	KEGG: eba:ebA2865 cold shock family protein
YP_004232613.1	PFAM: YCII-related; KEGG: tin:Tint_1900 YCII-related protein
YP_004232614.1	KEGG: dia:Dtpsy_0061 FAD linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004232615.1	KEGG: met:M446_6291 hypothetical protein
YP_004232616.1	KEGG: dia:Dtpsy_0062 calcium-binding EF-hand-containing protein
YP_004232617.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; KEGG: dac:Daci_0066 ATP--cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type
YP_004232618.1	PFAM: Glycosyl transferase, family 2; KEGG: bph:Bphy_5418 glycosyl transferase family protein
YP_004232619.1	KEGG: pfo:Pfl01_2543 hypothetical protein
YP_004232620.1	PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: dac:Daci_5872 LmbE family protein
YP_004232621.1	PFAM: Nodulation protein S, NodS-related; KEGG: bpy:Bphyt_2239 methyltransferase type 12
YP_004232622.1	KEGG: dia:Dtpsy_0064 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004232623.1	TIGRFAM: Succinate CoA transferase; KEGG: pna:Pnap_0073 acetyl-CoA hydrolase; PFAM: Acetyl-CoA hydrolase/transferase
YP_004232624.1	KEGG: dia:Dtpsy_0067 hypothetical protein
YP_004232625.1	KEGG: vap:Vapar_0068 uracil-xanthine permease; TIGRFAM: Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004232626.1	KEGG: vap:Vapar_0070 hypothetical protein
YP_004232627.1	KEGG: hse:Hsero_1556 methyl-accepting chemotaxis transducer transmembrane I protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232628.1	KEGG: dia:Dtpsy_0070 radical SAM domain protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB
YP_004232629.1	SMART: Diguanylate cyclase, predicted; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_0071 diguanylate cyclase with GAF sensor; PFAM: Diguanylate cyclase, predicted; GAF
YP_004232630.1	KEGG: slt:Slit_2956 carbonic anhydrase family 3
YP_004232631.1	KEGG: mlo:mll2220 hypothetical protein
YP_004232632.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sml:Smlt1409 putative transmembrane LysE family transport protein
YP_004232633.1	KEGG: acd:AOLE_14110 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding
YP_004232634.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xca:xccb100_0255 transcriptional regulator, TetR family
YP_004232635.1	KEGG: rso:RS05497 hypothetical protein
YP_004232636.1	PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like; KEGG: mms:mma_1660 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; SMART: ATPase, AAA+ type, core
YP_004232637.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: har:HEAR1634 putative transmembrane ABC transporter protein
YP_004232638.1	KEGG: dia:Dtpsy_0072 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004232639.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_2901 transcriptional regulator, LysR family
YP_004232640.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_2900 major facilitator superfamily MFS_1
YP_004232641.1	KEGG: pol:Bpro_2298 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004232642.1	KEGG: smd:Smed_3586 SMP-30/gluconolaconase/LRE domain-containing protein; PFAM: Transcription regulator IclR, C-terminal; SMP-30/Gluconolaconase/LRE-like region; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004232643.1	PFAM: Peptidase M48; KEGG: reh:H16_A2221 Zn-dependent protease with chaperone function
YP_004232644.1	KEGG: dia:Dtpsy_0073 hypothetical protein
YP_004232645.1	TIGRFAM: Acetoacetyl-CoA synthase; KEGG: dac:Daci_0087 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004232646.1	TIGRFAM: Arginase, subgroup; KEGG: ctt:CtCNB1_4178 arginase; PFAM: Ureohydrolase
YP_004232647.1	KEGG: ctt:CtCNB1_4177 ornithine cyclodeaminase/mu-crystallin; PFAM: Ornithine cyclodeaminase/mu-crystallin
YP_004232648.1	KEGG: pol:Bpro_0400 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; Helix-turn-helix, type 11; SMART: Transcription regulator AsnC-type
YP_004232649.1	KEGG: dia:Dtpsy_0083 CDP-diacylglycerol/serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004232650.1	KEGG: dia:Dtpsy_0084 septum site-determining protein MinC; TIGRFAM: Septum formation inhibitor MinC; PFAM: Septum formation inhibitor MinC, C-terminal; Septum formation inhibitor MinC, N-terminal
YP_004232651.1	KEGG: dia:Dtpsy_0085 septum site-determining protein MinD; TIGRFAM: Septum site-determining protein MinD; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004232652.1	KEGG: vei:Veis_1634 cell division topological specificity factor MinE; TIGRFAM: Septum formation topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE
YP_004232653.1	manually curated; PFAM: Flavin reductase-like, FMN-binding; KEGG: vei:Veis_5008 flavin reductase domain-containing protein; SMART: Flavin reductase-like, FMN-binding
YP_004232654.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dia:Dtpsy_0088 alpha/beta hydrolase fold protein
YP_004232655.1	KEGG: har:HEAR2951 carboxypeptidase; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A
YP_004232656.1	PFAM: NADPH-dependent FMN reductase; KEGG: dar:Daro_1812 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
YP_004232657.1	KEGG: ajs:Ajs_0071 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004232658.1	KEGG: dia:Dtpsy_0091 chromosome replication initiation inhibitor protein; TIGRFAM: Transcription regulator ArgP; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding
YP_004232659.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dia:Dtpsy_0092 transcriptional regulator, TetR family
YP_004232660.1	PFAM: PilT protein, N-terminal; KEGG: xne:XNC1_2876 PilT protein, N-terminal
YP_004232661.1	PFAM: UspA; KEGG: ajs:Ajs_0074 UspA domain-containing protein
YP_004232662.1	PFAM: Metallo-dependent phosphatase; KEGG: dac:Daci_0111 metallophosphoesterase
YP_004232663.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0095 transcriptional regulator, LysR family
YP_004232664.1	KEGG: dia:Dtpsy_0096 hypothetical protein
YP_004232665.1	KEGG: dac:Daci_0114 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising
YP_004232666.1	KEGG: bbt:BBta_4672 putative 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004232667.1	KEGG: vei:Veis_4986 ExsB protein; TIGRFAM: Queuosine synthesis; PFAM: Queuosine synthesis
YP_004232668.1	KEGG: pna:Pnap_0108 hypothetical protein
YP_004232669.1	PFAM: Glucan biosynthesis, periplasmic, MdoG C-terminal; KEGG: mpt:Mpe_A1791 glucan biosynthesis protein D
YP_004232670.1	KEGG: dia:Dtpsy_0099 threonine dehydratase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT
YP_004232671.1	KEGG: xom:XOO_2877 hypothetical protein
YP_004232672.1	KEGG: dwi:Dwil_GK23239 GK23239 gene product from transcript GK23239-RA
YP_004232673.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; KEGG: dia:Dtpsy_0100 acyl-CoA dehydrogenase domain protein
YP_004232674.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: reh:H16_B0872 LysR family transcriptional regulator
YP_004232675.1	KEGG: reh:H16_B0873 gentisate 1,2-dioxygenase; TIGRFAM: Gentisate 1,2-dioxygenase; PFAM: Cupin 2, conserved barrel
YP_004232676.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: bcj:BCAM1272 putative fumarylpyruvate hydrolase
YP_004232677.1	TIGRFAM: Maleylacetoacetate isomerase; KEGG: rso:RSc1085 putative GST-related protein; PFAM: Glutathione S-transferase, N-terminal
YP_004232678.1	PFAM: Major facilitator superfamily MFS-1; KEGG: azl:AZL_a09170 3-hydroxyphenylpropionic acid
YP_004232679.1	KEGG: vap:Vapar_1695 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004232680.1	KEGG: bur:Bcep18194_B2555 ornithine cyclodeaminase; PFAM: Ornithine cyclodeaminase/mu-crystallin
YP_004232681.1	KEGG: bcm:Bcenmc03_3403 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004232682.1	PFAM: YheO-like; KEGG: bps:BPSS2061 hypothetical protein
YP_004232683.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: vap:Vapar_1696 alpha/beta hydrolase fold protein
YP_004232684.1	PFAM: Outer membrane protein, OmpW; KEGG: mpt:Mpe_A3010 putative outer membrane protein W
YP_004232685.1	KEGG: lch:Lcho_1935 hypothetical protein
YP_004232686.1	KEGG: bps:BPSL0548 hypothetical protein
YP_004232687.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_0979 LysR family transcriptional regulator
YP_004232688.1	KEGG: pol:Bpro_0980 oxidoreductase FAD-binding region; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; Ferredoxin
YP_004232689.1	KEGG: lch:Lcho_0797 Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal
YP_004232690.1	PFAM: Aromatic-ring-hydroxylating dioxygenase, beta subunit; KEGG: azo:azo2515 putative ring hydroxylating beta subunit
YP_004232691.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: vap:Vapar_5347 Rieske (2Fe-2S) domain protein
YP_004232692.1	KEGG: lch:Lcho_1601 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004232693.1	KEGG: rme:Rmet_1669 dipeptidyl aminopeptidase/acylaminoacyl-peptidase
YP_004232694.1	PFAM: Major facilitator superfamily MFS-1; KEGG: hse:Hsero_4626 major facilitator superfamily permease
YP_004232695.1	KEGG: hse:Hsero_4628 hypothetical protein
YP_004232696.1	KEGG: xcv:XCV0233 putative secreted protein
YP_004232697.1	KEGG: mno:Mnod_2330 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004232698.1	KEGG: xal:XALc_2599 probable two-component system sensor protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232699.1	KEGG: dac:Daci_0169 homocysteine S-methyltransferase; PFAM: Homocysteine S-methyltransferase
YP_004232700.1	KEGG: sse:Ssed_3497 ATPase
YP_004232701.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vei:Veis_1196 LysR family transcriptional regulator
YP_004232702.1	KEGG: vei:Veis_1197 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain
YP_004232703.1	PFAM: Cupin 2, conserved barrel; KEGG: bpt:Bpet2160 hypothetical protein
YP_004232704.1	KEGG: dac:Daci_3673 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004232705.1	KEGG: vei:Veis_1198 hypothetical protein
YP_004232706.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; PFAM: RQC domain; Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: dia:Dtpsy_0103 ATP-dependent DNA helicase RecQ; SMART: RQC domain; DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain
YP_004232707.1	PFAM: Beta-lactamase-related; KEGG: psa:PST_0929 hypothetical protein
YP_004232708.1	PFAM: Beta-lactamase-related; KEGG: psa:PST_0928 beta-lactamase
YP_004232709.1	KEGG: mpt:Mpe_A0910 hypothetical protein
YP_004232710.1	KEGG: mpt:Mpe_A0909 hypothetical protein; PFAM: DEAD2; SMART: Helicase, ATP-dependent, c2 type
YP_004232711.1	PFAM: RNA ligase domain, REL/Rln2; KEGG: ctt:CtCNB1_2712 eukaryotic DNA ligase III-like protein
YP_004232712.1	PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: pwa:Pecwa_2476 hypothetical protein
YP_004232713.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: eca:ECA1819 TetR family transcriptional regulator
YP_004232714.1	KEGG: bbt:BBta_3871 putative cytochrome b561
YP_004232715.1	KEGG: dac:Daci_5949 hypothetical protein
YP_004232716.1	KEGG: ajs:Ajs_0094 hypothetical protein
YP_004232717.1	PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: dac:Daci_0211 Glu/Leu/Phe/Val dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal
YP_004232718.1	KEGG: pay:PAU_00205 outer membrane usher protein
YP_004232719.1	KEGG: ajs:Ajs_0136 hypothetical protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related
YP_004232720.1	PFAM: Amidase; KEGG: bra:BRADO0898 putative amidase
YP_004232721.1	KEGG: vap:Vapar_1120 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004232722.1	KEGG: dac:Daci_3857 hypothetical protein
YP_004232723.1	PFAM: Glycoside hydrolase, family 19, catalytic; KEGG: hch:HCH_00681 hypothetical protein
YP_004232724.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_0169 transcriptional regulator, LysR family
YP_004232725.1	PFAM: Transmembrane pair, bacterial; KEGG: vei:Veis_1694 transmembrane pair domain-containing protein
YP_004232726.1	KEGG: dac:Daci_0218 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004232727.1	KEGG: dac:Daci_0219 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232728.1	TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; KEGG: dac:Daci_0220 UreA ABC transporter, UreA binding protein
YP_004232729.1	KEGG: dac:Daci_0221 UreA ABC transporter, permease protein UrtB; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: ABC transporter permease
YP_004232730.1	KEGG: dac:Daci_0222 UreA ABC transporter, permease protein UrtC; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: ABC transporter permease
YP_004232731.1	TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: dac:Daci_0223 UreA ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter-like
YP_004232732.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: dac:Daci_0224 UreA ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter-like
YP_004232733.1	KEGG: vap:Vapar_3140 formamidase; PFAM: Acetamidase/Formamidase
YP_004232734.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: dac:Daci_0226 FmdB family regulatory protein; SMART: Regulatory protein, FmdB, putative
YP_004232735.1	KEGG: mch:Mchl_3681 acylamide amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004232736.1	KEGG: bpy:Bphyt_4292 hypothetical protein
YP_004232737.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0157 transcriptional regulator, LysR family
YP_004232738.1	SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Muconate/chloromuconate cycloisomerase; KEGG: ajs:Ajs_0140 muconate and chloromuconate cycloisomerases; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004232739.1	manually curated; KEGG: eay:EAM_0423 cysteine protease avirulence protein AvrRpt2 precursor (avirulence protein avrrpt2)
YP_004232740.1	KEGG: ajs:Ajs_4147 hypothetical protein
YP_004232741.1	KEGG: ctt:CtCNB1_2593 transcriptional regulator, GntR family; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004232742.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pna:Pnap_1659 LysR family transcriptional regulator
YP_004232743.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pna:Pnap_1660 major facilitator superfamily transporter
YP_004232744.1	KEGG: npu:Npun_R5804 pentapeptide repeat-containing protein
YP_004232745.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_3933 transcriptional regulator, LysR family
YP_004232746.1	KEGG: vap:Vapar_3932 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004232747.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: vap:Vapar_3931 aminotransferase class V
YP_004232748.1	PFAM: Membrane protein, aromatic hydrocarbon degradation; KEGG: gpb:HDN1F_00370 putative membrane protein involved in aromatic hydrocarbon degradation
YP_004232749.1	PFAM: Ureidoglycolate hydrolase; KEGG: bvi:Bcep1808_0616 ureidoglycolate hydrolase
YP_004232750.1	PFAM: ABC transporter-like; KEGG: rso:RSc2106 amino-acid ATP-binding ABC transporter protein; SMART: ATPase, AAA+ type, core
YP_004232751.1	KEGG: rso:RSc2105 amino-acid transmembrane ABC transporter protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004232752.1	KEGG: rso:RSc2104 amino-acid transmembrane ABC transporter protein; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004232753.1	KEGG: dac:Daci_0230 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004232754.1	KEGG: rso:RSc2102 transcription regulator protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004232755.1	KEGG: pna:Pnap_0374 putative lipoprotein
YP_004232756.1	TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: vap:Vapar_0171 methionine synthase; PFAM: Vitamin B12-dependent methionine synthase, activation domain; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Pterin-binding
YP_004232757.1	TIGRFAM: CRISPR-associated protein, SAG0894; KEGG: vei:Veis_1230 CRISPR-associated endonuclease Csn1 family protein
YP_004232758.1	KEGG: vei:Veis_1231 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1, NMENI subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004232759.1	KEGG: vei:Veis_1232 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2
YP_004232760.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004232761.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004232762.1	KEGG: scb:SCAB_26961 putative calcineurin-like phosphoesterase
YP_004232763.1	TIGRFAM: Phospholipase C, phosphocholine-specific; KEGG: bgl:bglu_2g09650 phospholipase C; PFAM: Phosphoesterase; Phospholipase C, bacterial, C-terminal
YP_004232764.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: xal:XALc_0992 hypothetical protein; SMART: Diguanylate cyclase, predicted
YP_004232765.1	PFAM: Ribonuclease BN-related; KEGG: dia:Dtpsy_0169 ribonuclease BN
YP_004232766.1	PFAM: Protein of unknown function DUF72; KEGG: vap:Vapar_3671 protein of unknown function DUF72
YP_004232767.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: ajs:Ajs_0152 17 kDa surface antigen
YP_004232768.1	KEGG: dia:Dtpsy_0171 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain
YP_004232769.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0176 transcriptional regulator, LysR family
YP_004232770.1	KEGG: dia:Dtpsy_0177 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004232771.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: atu:Atu4764 acetyltransferase
YP_004232772.1	KEGG: ajs:Ajs_0160 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232773.1	KEGG: mpt:Mpe_A2023 hypothetical protein
YP_004232774.1	KEGG: dar:Daro_2150 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232775.1	KEGG: dar:Daro_2148 helix-turn-helix, fis-type; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004232776.1	TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; KEGG: ajs:Ajs_0161 Mg chelatase, subunit ChlI; SMART: ATPase, AAA+ type, core
YP_004232777.1	KEGG: ajs:Ajs_0162 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_004232778.1	KEGG: dia:Dtpsy_0181 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII
YP_004232779.1	KEGG: ajs:Ajs_0164 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter
YP_004232780.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dia:Dtpsy_0183 SMP-30/gluconolaconase/LRE domain protein
YP_004232781.1	KEGG: fbc:FB2170_00605 hypothetical protein
YP_004232782.1	KEGG: scl:sce2706 hypothetical protein
YP_004232783.1	KEGG: pmi:PMT9312_0720 putative secreted protein
YP_004232784.1	KEGG: pbe:PB000792.02.0 hypothetical protein
YP_004232785.1	KEGG: rmr:Rmar_1321 peptidase M24
YP_004232786.1	KEGG: mxa:MXAN_5156 hypothetical protein
YP_004232787.1	PFAM: PAAR motif; KEGG: dac:Daci_0699 PaaR repeat-containing protein
YP_004232788.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D
YP_004232789.1	PFAM: FAD linked oxidase, N-terminal; KEGG: dac:Daci_0304 FAD linked oxidase domain-containing protein
YP_004232790.1	PFAM: Protein of unknown function DUF1275; KEGG: dia:Dtpsy_0185 protein of unknown function DUF1275
YP_004232791.1	PFAM: Cysteine-rich domain; KEGG: dia:Dtpsy_0186 glycolate oxidase iron-sulfur subunit
YP_004232792.1	KEGG: dia:Dtpsy_0187 ProQ activator of osmoprotectant transporter ProP; PFAM: Fertility inhibition FinO/ProQ; SMART: Fertility inhibition FinO/ProQ
YP_004232793.1	KEGG: dac:Daci_3583 hypothetical protein
YP_004232794.1	KEGG: dac:Daci_3583 hypothetical protein
YP_004232795.1	KEGG: eta:ETA_09590 hypothetical protein
YP_004232796.1	KEGG: pam:PANA_2941 hypothetical protein
YP_004232797.1	KEGG: dia:Dtpsy_0191 glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004232798.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_0174 hypothetical protein
YP_004232799.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dia:Dtpsy_0193 lysophospholipid transporter LplT
YP_004232800.1	TIGRFAM: Alanine racemase; KEGG: dia:Dtpsy_0194 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal
YP_004232801.1	KEGG: dia:Dtpsy_0195 hypothetical protein
YP_004232802.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dia:Dtpsy_0663 extracellular solute-binding protein family 5
YP_004232803.1	TIGRFAM: Fumarylacetoacetase; KEGG: vap:Vapar_0287 fumarylacetoacetase; PFAM: Fumarylacetoacetase, C-terminal-like; Fumarylacetoacetase, N-terminal
YP_004232804.1	KEGG: reu:Reut_A2507 hypothetical protein
YP_004232805.1	KEGG: eba:p2A140 IclR family regulatory protein; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004232806.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dia:Dtpsy_0197 glutathione S-transferase domain protein
YP_004232807.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: pol:Bpro_0197 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_004232808.1	KEGG: stp:Strop_1435 hypothetical protein
YP_004232809.1	TIGRFAM: DNA repair protein RadA; PFAM: Circadian clock protein KaiC/DNA repair protein RadA; Peptidase S16, Lon C-terminal; KEGG: dia:Dtpsy_0199 DNA repair protein RadA; SMART: ATPase, AAA+ type, core
YP_004232810.1	KEGG: dia:Dtpsy_0200 hypothetical protein
YP_004232811.1	TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: pol:Bpro_0203 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV
YP_004232812.1	KEGG: dia:Dtpsy_0202 hypothetical protein
YP_004232813.1	PFAM: Capsular polysaccharide synthesis; KEGG: dac:Daci_0318 hypothetical protein
YP_004232814.1	PFAM: O-antigen ligase-related; KEGG: ajs:Ajs_0184 O-antigen polymerase
YP_004232815.1	PFAM: Glycosyl transferase, group 1; KEGG: ajs:Ajs_0185 glycosyl transferase, group 1
YP_004232816.1	PFAM: Glycosyl transferase, family 2; KEGG: ajs:Ajs_0186 glycosyl transferase family protein
YP_004232817.1	PFAM: Capsular polysaccharide synthesis; KEGG: ajs:Ajs_0187 hypothetical protein
YP_004232818.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: ajs:Ajs_0188 2-nitropropane dioxygenase, NPD
YP_004232819.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_0189 LysR family transcriptional regulator
YP_004232820.1	PFAM: Domain of unknown function DUF1228; KEGG: dia:Dtpsy_0209 protein of unknown function DUF1228
YP_004232821.1	KEGG: vei:Veis_2634 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232822.1	KEGG: ajs:Ajs_0194 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004232823.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_0329 major facilitator transporter
YP_004232824.1	KEGG: dia:Dtpsy_0215 transcriptional regulator, AraC family; PFAM: Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004232825.1	PFAM: Drug/metabolite transporter; KEGG: dia:Dtpsy_0216 protein of unknown function DUF6 transmembrane
YP_004232826.1	PFAM: Peptidase M48; KEGG: dia:Dtpsy_0218 peptidase M48 Ste24p
YP_004232827.1	KEGG: lsp:Bsph_0838 hypothetical protein; TIGRFAM: Sodium/sulphate symporter; PFAM: Sodium/sulphate symporter
YP_004232828.1	KEGG: dia:Dtpsy_0220 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004232829.1	KEGG: bja:bll3749 glutamate carboxypeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004232830.1	PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: bbr:BB4124 putative enzyme-regulator fusion protein
YP_004232831.1	KEGG: ctt:CtCNB1_2931 putative GAF sensor protein; PFAM: GAF; SMART: GAF
YP_004232833.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rso:RSc1152 transcription regulator protein
YP_004232834.1	PFAM: Major facilitator superfamily MFS-1; KEGG: rsc:RCFBP_20280 putative transmembrane efflux protein (major facilitator superfamily)
YP_004232835.1	KEGG: bmj:BMULJ_05175 2,5-diketo-D-gluconate reductase B; PFAM: NADP-dependent oxidoreductase domain
YP_004232836.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: ajs:Ajs_0233 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004232837.1	TIGRFAM: Orotate phosphoribosyl transferase, clade 1; KEGG: dia:Dtpsy_0228 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004232838.1	KEGG: dia:Dtpsy_0229 hypothetical protein
YP_004232839.1	TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; KEGG: ajs:Ajs_0236 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; SMART: Asn/Gln amidotransferase
YP_004232840.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: cja:CJA_1579 phage-related regulatory protein CII
YP_004232841.1	PFAM: ATPase, AAA-4; KEGG: dze:Dd1591_2722 putative transcriptional regulator
YP_004232842.1	KEGG: dia:Dtpsy_0231 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; PFAM: Amidase
YP_004232843.1	KEGG: dia:Dtpsy_0232 glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit
YP_004232844.1	KEGG: dia:Dtpsy_0233 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl
YP_004232845.1	KEGG: dia:Dtpsy_0234 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC
YP_004232846.1	KEGG: dia:Dtpsy_0235 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD
YP_004232847.1	TIGRFAM: Penicillin-binding protein 2; KEGG: dia:Dtpsy_0236 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004232848.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_0243 hypothetical protein
YP_004232849.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0238 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004232850.1	KEGG: dia:Dtpsy_0239 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004232851.1	KEGG: vei:Veis_1602 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004232852.1	TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: pmy:Pmen_4547 L-serine ammonia-lyase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain
YP_004232853.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pmy:Pmen_4546 LysR family transcriptional regulator
YP_004232854.1	PFAM: Protein of unknown function DUF81; KEGG: ajs:Ajs_0248 hypothetical protein
YP_004232855.1	KEGG: dia:Dtpsy_0243 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004232856.1	KEGG: vei:Veis_0920 hypothetical protein; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140
YP_004232857.1	PFAM: ABC transporter-like; KEGG: vei:Veis_0921 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004232858.1	PFAM: Mammalian cell entry-related; KEGG: dia:Dtpsy_0246 mammalian cell entry related domain protein
YP_004232859.1	PFAM: Protein of unknown function DUF330; KEGG: ajs:Ajs_0253 putative lipoprotein
YP_004232860.1	KEGG: xom:XOO_3221 hypothetical protein
YP_004232861.1	KEGG: vap:Vapar_4457 ABC transporter related
YP_004232862.1	KEGG: lif:LinJ14.0600 hypothetical protein
YP_004232863.1	KEGG: dac:Daci_3720 YD repeat-containing protein
YP_004232864.1	KEGG: pjd:Pjdr2_0847 S-layer domain protein
YP_004232865.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: dac:Daci_2953 TonB-dependent siderophore receptor; SMART: Secretin/TonB, short N-terminal
YP_004232866.1	PFAM: FecR protein; KEGG: dac:Daci_2952 anti-FecI sigma factor, FecR
YP_004232867.1	KEGG: dac:Daci_2951 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004232868.1	KEGG: vap:Vapar_2406 phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004232869.1	PFAM: CsbD-like; KEGG: dac:Daci_0369 CsbD family protein
YP_004232870.1	KEGG: ajs:Ajs_0255 hypothetical protein
YP_004232871.1	TIGRFAM: Haemerythrin-like, metal-binding; KEGG: dia:Dtpsy_0251 hemerythrin-like metal-binding protein
YP_004232872.1	KEGG: mau:Micau_1261 methionine synthase vitamin-B12 independent
YP_004232873.1	PFAM: Uncharacterised protein family, inner membrane CreD; KEGG: pol:Bpro_0235 hypothetical protein
YP_004232874.1	KEGG: pol:Bpro_0236 sensory histidine kinase CreC; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004232875.1	KEGG: pol:Bpro_0237 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004232876.1	KEGG: dia:Dtpsy_0253 multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related
YP_004232877.1	KEGG: dia:Dtpsy_0254 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004232878.1	KEGG: pol:Bpro_0241 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004232879.1	KEGG: dia:Dtpsy_0256 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004232880.1	PFAM: Secretion protein HlyD; KEGG: dia:Dtpsy_0257 secretion protein HlyD family protein
YP_004232881.1	KEGG: ajs:Ajs_0263 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004232882.1	KEGG: dia:Dtpsy_0259 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004232883.1	PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: aeh:Mlg_1607 glutamine amidotransferase class-I
YP_004232884.1	PFAM: Mg2+ transporter protein, CorA-like; KEGG: dac:Daci_0379 Mg2 transporter protein CorA family protein
YP_004232885.1	KEGG: ctt:CtCNB1_0294 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase
YP_004232886.1	PFAM: Uncharacterised protein family UPF0093; KEGG: pna:Pnap_0193 hypothetical protein
YP_004232887.1	PFAM: VanZ-like; KEGG: dia:Dtpsy_0264 VanZ family protein
YP_004232888.1	PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: dia:Dtpsy_0265 ferredoxin-like protein
YP_004232889.1	KEGG: dia:Dtpsy_0266 putative transmembrane protein
YP_004232890.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal; KEGG: dia:Dtpsy_0267 serine-type D-Ala-D-Ala carboxypeptidase; SMART: Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal
YP_004232891.1	KEGG: rfr:Rfer_3800 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23
YP_004232892.1	KEGG: dac:Daci_0387 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7
YP_004232893.1	TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: vei:Veis_1261 elongation factor G; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004232894.1	KEGG: vei:Veis_2257 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2
YP_004232895.1	TIGRFAM: Ribosomal protein S10 subgroup; HAMAP: Ribosomal protein S10 subgroup; KEGG: ctt:CtCNB1_0305 ribosomal protein S10; PFAM: Ribosomal protein S10
YP_004232896.1	KEGG: dia:Dtpsy_0273 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3
YP_004232897.1	PFAM: Ribosomal protein L4/L1e; KEGG: dia:Dtpsy_0274 50S ribosomal protein L4
YP_004232898.1	PFAM: Ribosomal protein L25/L23; KEGG: dia:Dtpsy_0275 50S ribosomal protein L23
YP_004232899.1	KEGG: dia:Dtpsy_0276 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain
YP_004232900.1	KEGG: dia:Dtpsy_0277 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15
YP_004232901.1	KEGG: dac:Daci_0396 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17
YP_004232902.1	TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: vei:Veis_1270 30S ribosomal protein S3; SMART: K Homology
YP_004232903.1	KEGG: dia:Dtpsy_0280 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16
YP_004232904.1	KEGG: dac:Daci_0399 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29
YP_004232905.1	KEGG: dia:Dtpsy_0282 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17
YP_004232906.1	PFAM: Redoxin; KEGG: ajs:Ajs_0288 redoxin domain-containing protein
YP_004232907.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dia:Dtpsy_0284 GCN5-related N-acetyltransferase
YP_004232908.1	PFAM: Redoxin; KEGG: ctt:CtCNB1_0320 redoxin
YP_004232909.1	KEGG: dia:Dtpsy_0288 hypothetical protein
YP_004232910.1	PFAM: Phosphotransferase system, fructose subfamily IIA component; KEGG: ajs:Ajs_0295 PTS system fructose subfamily IIA component
YP_004232911.1	KEGG: dia:Dtpsy_0291 phosphocarrier, HPr family; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PFAM: Phosphotransferase system, phosphocarrier HPr protein
YP_004232912.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; KEGG: vei:Veis_1282 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain
YP_004232914.1	KEGG: pfl:PFL_4575 K+-transporting ATPase, F subunit; TIGRFAM: ATPase, P-type, K+-transporting, F subunit; PFAM: ATPase, P-type, K+-transporting, F subunit
YP_004232915.1	TIGRFAM: ATPase, K+ transporting, A subunit; KEGG: pna:Pnap_3604 potassium-transporting ATPase subunit A; PFAM: ATPase, K+ transporting, A subunit
YP_004232916.1	TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: vap:Vapar_4994 K+-transporting ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase
YP_004232917.1	TIGRFAM: Potassium transporting ATPase, C subunit; KEGG: pna:Pnap_3602 potassium-transporting ATPase, C subunit; PFAM: Potassium transporting ATPase, C subunit
YP_004232918.1	KEGG: vap:Vapar_4991 osmosensitive K channel His kinase sensor; PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; ATPase-like, ATP-binding domain; UspA; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004232919.1	KEGG: vap:Vapar_4990 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004232920.1	KEGG: rpi:Rpic_2768 hypothetical protein
YP_004232921.1	KEGG: ske:Sked_22090 uncharacterized membrane protein, putative virulence factor
YP_004232922.1	SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: dia:Dtpsy_0293 lipoyl synthase; PFAM: Radical SAM
YP_004232923.1	TIGRFAM: Octanoyltransferase; KEGG: dac:Daci_0411 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase
YP_004232924.1	KEGG: dia:Dtpsy_0295 protein of unknown function DUF493; HAMAP: Protein of unknown function DUF493; PFAM: Protein of unknown function DUF493
YP_004232925.1	KEGG: dia:Dtpsy_0296 ATP synthase I chain; manually curated; PFAM: ATPase, F0 complex, subunit I
YP_004232926.1	KEGG: ctt:CtCNB1_0330 ATP synthase F0, A subunit; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATPase, F0 complex, subunit A
YP_004232927.1	TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; HAMAP: ATPase, F0 complex, subunit C; KEGG: dac:Daci_0415 F0F1 ATP synthase subunit C; PFAM: ATPase, F0/V0 complex, subunit C
YP_004232928.1	TIGRFAM: ATPase, F0 complex, subunit B, bacterial; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: ctt:CtCNB1_0332 ATP synthase F0, B subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
YP_004232929.1	KEGG: ctt:CtCNB1_0333 ATP synthase F1, delta subunit; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit
YP_004232930.1	KEGG: dia:Dtpsy_0301 F0F1 ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal
YP_004232931.1	KEGG: dia:Dtpsy_0302 F0F1 ATP synthase subunit gamma; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit
YP_004232932.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, F1 complex, beta subunit; KEGG: dia:Dtpsy_0303 F0F1 ATP synthase subunit beta; HAMAP: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal
YP_004232933.1	KEGG: dia:Dtpsy_0304 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal
YP_004232934.1	KEGG: dac:Daci_3043 putative mRNA 3-end processing factor
YP_004232935.1	PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal; KEGG: dia:Dtpsy_0306 ATP-dependent DNA ligase
YP_004232936.1	KEGG: dac:Daci_3045 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DEAD/H associated; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004232937.1	PFAM: Metallo-dependent phosphatase; KEGG: dac:Daci_3046 metallophosphoesterase
YP_004232938.1	KEGG: rsl:RPSI07_2017 putative type III effector protein, SspH1 family
YP_004232939.1	KEGG: rsc:RCFBP_20079 putative type III effector protein, SspH1 family
YP_004232940.1	PFAM: Protein of unknown function DUF477; KEGG: ajs:Ajs_0314 hypothetical protein
YP_004232941.1	PFAM: Protein of unknown function DUF477; KEGG: dia:Dtpsy_0310 protein of unknown function DUF477
YP_004232942.1	PFAM: LemA; KEGG: dia:Dtpsy_0311 LemA family protein
YP_004232943.1	KEGG: dia:Dtpsy_0312 hypothetical protein
YP_004232944.1	KEGG: dia:Dtpsy_0313 alpha/beta hydrolase fold protein
YP_004232945.1	PFAM: Protein of unknown function DUF2944; KEGG: pna:Pnap_0262 hypothetical protein
YP_004232946.1	KEGG: pna:Pnap_0263 cytochrome c, class I
YP_004232947.1	PFAM: Kelch repeat type 1; KEGG: sbi:SORBI_02g006860 hypothetical protein
YP_004232948.1	KEGG: dia:Dtpsy_0316 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004232949.1	KEGG: dia:Dtpsy_0317 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004232950.1	KEGG: dia:Dtpsy_0318 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004232951.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Transcription regulator MAATS, C-terminal; KEGG: dia:Dtpsy_0319 transcriptional regulator, TetR family
YP_004232952.1	KEGG: dia:Dtpsy_2885 hypothetical protein
YP_004232953.1	KEGG: mmu:70373 RIKEN cDNA 1700020O03 gene
YP_004232954.1	PFAM: Glutamine amidotransferase, class-II; KEGG: dia:Dtpsy_0324 glutamine amidotransferase class-II
YP_004232955.1	KEGG: xtr:100492040 lincomycin resistance protein lmrB-like; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004232956.1	KEGG: dac:Daci_0663 4-oxalocrotonate tautomerase; TIGRFAM: 4-oxalocrotonate tautomerase, bacteria/archaea; PFAM: 4-oxalocrotonate tautomerase
YP_004232957.1	manually curated; KEGG: dac:Daci_0664 hypothetical protein
YP_004232958.1	KEGG: hse:Hsero_3032 methyl-accepting chemotaxis transducer transmembrane protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232959.1	TIGRFAM: Malate synthase G; KEGG: ajs:Ajs_0338 malate synthase G; PFAM: Malate synthase
YP_004232960.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0666 LysR family transcriptional regulator
YP_004232961.1	PFAM: Protein of unknown function DUF3016; KEGG: dac:Daci_0667 hypothetical protein
YP_004232962.1	SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related; KEGG: dac:Daci_0342 PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein; PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat
YP_004232963.1	PFAM: Protein of unknown function DUF2214, membrane; KEGG: ajs:Ajs_0341 putative transmembrane protein
YP_004232964.1	PFAM: Phosphate-starvation-induced PsiF repeat; KEGG: dia:Dtpsy_0331 PsiF repeat protein
YP_004232965.1	TIGRFAM: Arginyl-tRNA synthetase, class Ic; KEGG: dia:Dtpsy_0332 arginyl-tRNA synthetase
YP_004232966.1	PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_0333 sporulation domain protein
YP_004232967.1	PFAM: DSBA-like thioredoxin domain; KEGG: dia:Dtpsy_0334 DsbA oxidoreductase
YP_004232968.1	manually curated; TIGRFAM: Lipopolysccharide assembly, LptA; KEGG: ajs:Ajs_0346 OstA family protein; PFAM: Organic solvent tolerance-like, N-terminal
YP_004232969.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0673 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004232970.1	KEGG: ajs:Ajs_0348 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54; RNA polymerase sigma factor 54, core-binding
YP_004232971.1	PFAM: TspO/MBR-related protein; KEGG: csa:Csal_0168 TspO and MBR like proteins
YP_004232972.1	KEGG: dac:Daci_3477 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232973.1	KEGG: dac:Daci_3477 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004232974.1	PFAM: Putative RNA methylase; THUMP; KEGG: ajs:Ajs_0350 putative RNA methylase; SMART: THUMP
YP_004232975.1	KEGG: ajs:Ajs_0351 hypothetical protein; TIGRFAM: Protein of unknown function DUF132; PFAM: PilT protein, N-terminal
YP_004232976.1	KEGG: dar:Daro_0045 ABC transporter related; PFAM: ABC transporter, N-terminal; ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004232977.1	KEGG: dac:Daci_0690 hypothetical protein
YP_004232978.1	PFAM: SEC-C motif; KEGG: dia:Dtpsy_0342 sec-C motif domain protein
YP_004232979.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: ctt:CtCNB1_3880 sulphate transporter
YP_004232980.1	KEGG: bvi:Bcep1808_4764 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; CHASE3; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004232981.1	KEGG: ajs:Ajs_0354 CinA domain-containing protein; TIGRFAM: CinA, C-terminal; PFAM: CinA, C-terminal
YP_004232982.1	PFAM: Phosphatidylglycerophosphatase A; KEGG: vei:Veis_0582 phosphatidylglycerophosphatase A
YP_004232983.1	TIGRFAM: Conserved hypothetical protein CHP02231; KEGG: vap:Vapar_3625 hypothetical protein
YP_004232984.1	TIGRFAM: Thiamine-monophosphate kinase; KEGG: dia:Dtpsy_0345 thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal
YP_004232985.1	KEGG: xca:xccb100_1254 hypothetical protein
YP_004232986.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: pfs:PFLU2242 hypothetical protein
YP_004232987.1	KEGG: dac:Daci_5118 hypothetical protein
YP_004232988.1	KEGG: dac:Daci_0789 FMN-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004232989.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0788 LysR family transcriptional regulator
YP_004232990.1	TIGRFAM: Carboxylate-amine ligase, predicted; HAMAP: Carboxylate-amine ligase, predicted; KEGG: dia:Dtpsy_0346 carboxylate-amine ligase; PFAM: Glutamate--cysteine ligase, GCS2
YP_004232991.1	PFAM: Cation/H+ exchanger; KEGG: ajs:Ajs_0358 sodium/hydrogen exchanger
YP_004232992.1	PFAM: Site-specific recombinase Gcr; KEGG: dia:Dtpsy_0348 putative site-specific recombinase transmembrane protein
YP_004232993.1	KEGG: dia:Dtpsy_0349 ApaG; HAMAP: Uncharacterised protein family ApaG; PFAM: ApaG domain
YP_004232994.1	TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: dia:Dtpsy_0350 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase
YP_004232995.1	KEGG: ajs:Ajs_0362 hypothetical protein
YP_004232996.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: dia:Dtpsy_0352 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004232997.1	KEGG: dia:Dtpsy_0355 putative lipoprotein transmembrane
YP_004232998.1	TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: dia:Dtpsy_0356 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal
YP_004232999.1	KEGG: dia:Dtpsy_0357 chorismate mutase; PFAM: Chorismate mutase, type II; SMART: Chorismate mutase
YP_004233000.1	KEGG: xca:xccb100_3171 AraC-family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004233001.1	KEGG: xca:xccb100_3173 transcriptional regulator HrpG; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal
YP_004233002.1	KEGG: bte:BTH_II0761 hypothetical protein
YP_004233003.1	KEGG: pcs:Pc21g05120 Pc21g05120
YP_004233004.1	KEGG: rsl:RPSI07_mp0805 type III secretion protein HrcS; TIGRFAM: Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3
YP_004233005.1	KEGG: rso:RSp0860 type III secretion system protein; TIGRFAM: Yop virulence translocation protein R; PFAM: Type III secretion system inner membrane P protein
YP_004233006.1	KEGG: bpd:BURPS668_A2279 type III secretion system apparatus protein YscQ/HrcQ; TIGRFAM: Type III secretion system apparatus protein YscQ/HrcQ/SpaO; PFAM: Surface presentation of antigen (SpoA)
YP_004233007.1	PFAM: Type III secretion protein HpaP; KEGG: lma:LmjF35.0290 hypothetical protein
YP_004233008.1	KEGG: bcm:Bcenmc03_5931 HrcV family type III secretion protein; TIGRFAM: Type III secretion protein HrcV; PFAM: Type III secretion system FHIPEP
YP_004233009.1	KEGG: xca:xccb100_3075 type III secretion system protein HrcU; TIGRFAM: Type III secretion protein HrpY/HrcU; PFAM: Type III secretion exporter
YP_004233010.1	KEGG: lif:LinJ27.0170 kinetoplast-associated protein-like protein
YP_004233011.1	KEGG: xop:PXO_03394 type III secretion apparatus protein SpaR/YscT/HrcT; TIGRFAM: Type III secretion protein SpaR/YscT; PFAM: Type III secretion system inner membrane R protein
YP_004233012.1	KEGG: mbo:Mb3538 PE-PGRS family protein
YP_004233013.1	KEGG: fal:FRAAL0037 hypothetical protein
YP_004233014.1	KEGG: ddd:Dda3937_02943 type III secreted protein; PFAM: Pectate lyase, catalytic
YP_004233015.1	manually curated; KEGG: rsl:RPSI07_mp1050 putative leucine-rich-repeat type III effector protein (GalA1-like)
YP_004233016.1	KEGG: msv:Mesil_2857 rhamnulose-1-phosphate aldolase/alcohol dehydrogenase
YP_004233017.1	KEGG: dak:DaAHT2_1880 translation initiation factor IF-2
YP_004233018.1	KEGG: xoo:XOO0097 hypothetical protein
YP_004233019.1	KEGG: cfl:Cfla_1510 translation initiation factor IF-2
YP_004233020.1	TIGRFAM: ATPase, type III secretion system, H+-transporting; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: bgf:BC1003_3632 type III secretion apparatus H+-transporting two-sector ATPase; SMART: ATPase, AAA+ type, core
YP_004233021.1	KEGG: bac:BamMC406_5635 HrpE/YscL family type III secretion apparatus protein; TIGRFAM: Type III secretion system HrpE/YscL; PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE
YP_004233022.1	PFAM: Type III secretion protein HrpB4; KEGG: xca:xccb100_3071 type III secretion system protein
YP_004233023.1	KEGG: rsl:RPSI07_mp0814 type III secretion system lipoprotein HrcJ; TIGRFAM: Type III secretion system lipoprotein HrcJ/YscJ; PFAM: Secretory protein YscJ/FliF
YP_004233024.1	PFAM: Type III secretion protein HrpB2; KEGG: xop:PXO_03400 type III secretion protein HrpB2
YP_004233025.1	PFAM: Type III secretion system, HrpB1/HrpK; KEGG: xom:XOO_0090 HrpB1 protein
YP_004233026.1	KEGG: mrd:Mrad2831_2183 TPR repeat-containing CheR-type MCP methyltransferase
YP_004233028.1	KEGG: bid:Bind_0123 RND family efflux transporter MFP subunit
YP_004233030.1	KEGG: kpu:KP1_2124 crotonobetaine/carnitine-CoA ligase
YP_004233031.1	KEGG: bfo:BRAFLDRAFT_127380 hypothetical protein
YP_004233032.1	KEGG: bpd:BURPS668_A2004 secretion-associated protein
YP_004233033.1	KEGG: bpm:BURPS1710b_A0648 YscC/HrcC family type III secretion outer membrane protein; TIGRFAM: Type III secretion system outer membrane pore YscC/HrcC; PFAM: Type II/III secretion system; NolW-like
YP_004233034.1	PFAM: Methyltransferase regulatory domain, predicted; Methyltransferase type 11; KEGG: rru:Rru_B0031 hypothetical protein
YP_004233035.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ctt:CtCNB1_1165 lytic transglycosylase, catalytic
YP_004233036.1	KEGG: afw:Anae109_2609 polysaccharide deacetylase
YP_004233037.1	KEGG: bja:bll1509 acetyltransferase
YP_004233038.1	KEGG: bac:BamMC406_5670 hypothetical protein
YP_004233039.1	KEGG: ote:Oter_1689 cell wall surface anchor family protein
YP_004233040.1	TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: dia:Dtpsy_0358 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004233041.1	PFAM: DinB; KEGG: aha:AHA_1299 DinB family protein
YP_004233042.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_4453 lysine exporter protein LysE/YggA
YP_004233043.1	TIGRFAM: Anthranilate phosphoribosyl transferase; KEGG: vei:Veis_1210 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal
YP_004233044.1	KEGG: dia:Dtpsy_0360 hypothetical protein
YP_004233045.1	KEGG: xtr:100490521 indole-3-glycerol phosphate synthase-like; PFAM: Indole-3-glycerol phosphate synthase
YP_004233046.1	KEGG: vei:Veis_1846 uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like
YP_004233047.1	KEGG: rsl:RPSI07_mp0106 putative type III effector protein (Hlk3)
YP_004233048.1	KEGG: dac:Daci_0780 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004233049.1	KEGG: ajs:Ajs_0374 S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein
YP_004233050.1	KEGG: bmu:Bmul_4214 hypothetical protein
YP_004233051.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: pst:PSPTO_4634 N-acetylmuramoyl-L-alanine amidase, putative
YP_004233052.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: pol:Bpro_1732 fumarylacetoacetate (FAA) hydrolase
YP_004233053.1	KEGG: pol:Bpro_1731 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004233054.1	KEGG: dia:Dtpsy_0366 metal dependent phosphohydrolase; PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004233055.1	TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; KEGG: ajs:Ajs_0376 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004233056.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0368 transcriptional regulator, LysR family
YP_004233057.1	PFAM: Ferritin/Dps protein; KEGG: dia:Dtpsy_0369 ferritin Dps family protein
YP_004233058.1	KEGG: vap:Vapar_5064 4-hydroxybenzoate polyprenyl transferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase
YP_004233059.1	PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: ctt:CtCNB1_0424 hypothetical protein
YP_004233060.1	PFAM: GtrA-like protein; KEGG: dac:Daci_0562 GtrA family protein
YP_004233061.1	KEGG: reu:Reut_B3508 PMT family 4-amino-4-deoxy-L-arabinose transferase/glycosyltransferase
YP_004233062.1	TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: vei:Veis_2325 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent
YP_004233063.1	TIGRFAM: Glycerol kinase; KEGG: ajs:Ajs_0382 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004233064.1	KEGG: ajs:Ajs_0383 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal
YP_004233065.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_1025 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233066.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: ajs:Ajs_0385 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233067.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0386 binding-protein-dependent transport systems inner membrane component
YP_004233068.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ajs:Ajs_0387 binding-protein-dependent transport systems inner membrane component
YP_004233069.1	PFAM: Protein of unknown function DUF2160, transmembrane; KEGG: dia:Dtpsy_0380 putative integral membrane protein
YP_004233070.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dac:Daci_1030 extracellular solute-binding protein
YP_004233071.1	KEGG: dac:Daci_1031 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004233072.1	KEGG: dia:Dtpsy_0383 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e
YP_004233073.1	TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: dia:Dtpsy_0384 50S ribosomal protein L24; SMART: KOW
YP_004233074.1	PFAM: Ribosomal protein L5; KEGG: dia:Dtpsy_0385 50S ribosomal protein L5
YP_004233075.1	PFAM: Ribosomal protein S14; KEGG: dia:Dtpsy_0386 30S ribosomal protein S14
YP_004233076.1	PFAM: Ribosomal protein S8; KEGG: dia:Dtpsy_0387 30S ribosomal protein S8
YP_004233077.1	KEGG: dia:Dtpsy_0388 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain
YP_004233078.1	KEGG: dia:Dtpsy_0389 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5
YP_004233079.1	KEGG: ctt:CtCNB1_4436 ribosomal protein S5-like protein; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal
YP_004233080.1	KEGG: dia:Dtpsy_0391 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain
YP_004233081.1	KEGG: dac:Daci_1041 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L18e/L15
YP_004233082.1	KEGG: dia:Dtpsy_0393 preprotein translocase subunit SecY; TIGRFAM: SecY protein; PFAM: SecY protein
YP_004233083.1	TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: ctt:CtCNB1_4432 ribosomal protein L36; PFAM: Ribosomal protein L36
YP_004233084.1	KEGG: dia:Dtpsy_0395 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13
YP_004233085.1	KEGG: dia:Dtpsy_0396 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11
YP_004233086.1	TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; KEGG: dia:Dtpsy_0397 30S ribosomal protein S4; SMART: RNA-binding S4
YP_004233087.1	SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; KEGG: vei:Veis_2301 DNA-directed RNA polymerase subunit alpha; HAMAP: DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal
YP_004233088.1	KEGG: dia:Dtpsy_0399 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17
YP_004233089.1	PFAM: Heat shock protein 70; KEGG: dac:Daci_1060 molecular chaperone, HSP70 class
YP_004233090.1	TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: dac:Daci_1061 uroporphyrin-III C/tetrapyrrole methyltransferase; PFAM: Tetrapyrrole methylase
YP_004233091.1	TIGRFAM: Uncharacterised protein family UPF0102; HAMAP: Uncharacterised protein family UPF0102; KEGG: dia:Dtpsy_0406 hypothetical protein; PFAM: Uncharacterised protein family UPF0102
YP_004233092.1	KEGG: dia:Dtpsy_0407 phosphoheptose isomerase
YP_004233093.1	PFAM: Transport-associated; KEGG: ajs:Ajs_0416 transport-associated
YP_004233094.1	KEGG: dia:Dtpsy_0409 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004233095.1	KEGG: ajs:Ajs_0418 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_004233096.1	KEGG: dia:Dtpsy_0411 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004233097.1	TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: dia:Dtpsy_0412 twitching motility protein; SMART: ATPase, AAA+ type, core
YP_004233098.1	KEGG: dia:Dtpsy_0413 alanine racemase domain protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal
YP_004233099.1	KEGG: vei:Veis_1686 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase
YP_004233100.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: dia:Dtpsy_0414 aminotransferase class V
YP_004233101.1	PFAM: Protein of unknown function DUF445, transmembrane; KEGG: dia:Dtpsy_0415 protein of unknown function DUF445
YP_004233102.1	KEGG: dac:Daci_1085 hypothetical protein
YP_004233103.1	KEGG: dac:Daci_1085 hypothetical protein
YP_004233104.1	KEGG: vap:Vapar_4571 hypothetical protein
YP_004233105.1	KEGG: dac:Daci_1083 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004233106.1	PFAM: DNA helicase, UvrD/REP type; KEGG: ctt:CtCNB1_4375 UvrD/REP helicase
YP_004233107.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0418 transcriptional regulator, LysR family
YP_004233108.1	TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: dia:Dtpsy_0419 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT
YP_004233109.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_0420 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004233110.1	KEGG: srt:Srot_0268 hypothetical protein
YP_004233111.1	KEGG: dia:Dtpsy_3519 hypothetical protein
YP_004233112.1	PFAM: MgtC/SapB transporter; KEGG: dac:Daci_1228 MgtC/SapB transporter
YP_004233113.1	PFAM: Domain of unknown function DUF399; KEGG: vei:Veis_0707 hypothetical protein
YP_004233114.1	KEGG: dia:Dtpsy_0423 GAF sensor signal transduction histidine kinase; PFAM: HAMP linker domain; ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: HAMP linker domain; ATPase-like, ATP-binding domain
YP_004233115.1	KEGG: dac:Daci_1106 two component LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004233116.1	KEGG: xal:XALc_2635 hypothetical xami restricion enzyme protein; PFAM: Restriction endonuclease, type II, XamI
YP_004233117.1	KEGG: bgf:BC1003_0428 site-specific DNA-methyltransferase (adenine-specific); manually curated
YP_004233118.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1107 major facilitator transporter
YP_004233119.1	KEGG: dia:Dtpsy_0426 nitrite transporter; TIGRFAM: Nitrate transporter; PFAM: Major facilitator superfamily MFS-1
YP_004233120.1	SMART: Molybdopterin oxidoreductase, Fe4S4 domain; TIGRFAM: Nitrate reductase, alpha subunit; KEGG: pol:Bpro_4595 respiratory nitrate reductase alpha subunit apoprotein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain
YP_004233121.1	KEGG: ajs:Ajs_0437 respiratory nitrate reductase beta subunit; TIGRFAM: Nitrate reductase, beta subunit
YP_004233122.1	TIGRFAM: Nitrate reductase chaperone, NarJ; KEGG: pol:Bpro_4593 respiratory nitrate reductase chaperone NarJ; PFAM: DMSO/Nitrate reductase chaperone
YP_004233123.1	TIGRFAM: Nitrate reductase, gamma subunit; KEGG: pol:Bpro_4592 respiratory nitrate reductase gamma subunit; PFAM: Nitrate reductase, gamma subunit
YP_004233124.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_0431 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004233125.1	PFAM: Carbonic anhydrase; KEGG: dia:Dtpsy_0432 carbonate dehydratase; SMART: Carbonic anhydrase
YP_004233126.1	SMART: Hedgehog/intein hint, N-terminal; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Intein splice site; KEGG: pol:Bpro_4588 ribonucleoside reductase; PFAM: Ribonucleotide reductase large subunit, C-terminal
YP_004233127.1	KEGG: fps:FP0015 putative cell surface protein precursor SprD
YP_004233128.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hse:Hsero_4592 lactoylglutathione lyase
YP_004233129.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: dia:Dtpsy_0436 hemerythrin HHE cation binding domain protein
YP_004233130.1	PFAM: Cupin 2, conserved barrel; KEGG: fba:FIC_00803 hypothetical protein
YP_004233131.1	PFAM: Major facilitator superfamily MFS-1; KEGG: cpi:Cpin_1308 major facilitator superfamily MFS_1
YP_004233132.1	KEGG: dia:Dtpsy_0437 hypothetical protein
YP_004233133.1	PFAM: Protein of unknown function DUF3108; KEGG: dia:Dtpsy_0438 hypothetical protein
YP_004233134.1	KEGG: dac:Daci_1125 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004233135.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: ajs:Ajs_0449 fumarylacetoacetate (FAA) hydrolase
YP_004233136.1	PFAM: GumN predicted; KEGG: dac:Daci_1127 GumN family protein
YP_004233137.1	KEGG: dia:Dtpsy_0441 hypothetical protein
YP_004233138.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: kpu:KP1_4200 putative LysR-family transcriptional regulator
YP_004233139.1	KEGG: bcm:Bcenmc03_6810 NmrA family protein
YP_004233140.1	PFAM: ThiJ/PfpI; KEGG: bsb:Bresu_1807 ThiJ/PfpI domain protein
YP_004233141.1	KEGG: nph:NP2168A che operon protein (homolog 1 to phycocyanobilin lyase subunit)
YP_004233142.1	KEGG: geo:Geob_1618 NHL repeat containing protein; PFAM: Fibronectin, type III; Kelch repeat type 1; SMART: Fibronectin, type III; Proteasome, alpha-subunit, conserved site; Kelch repeat type 1
YP_004233143.1	KEGG: vha:VIBHAR_06389 hypothetical protein
YP_004233144.1	PFAM: Drug/metabolite transporter; KEGG: dac:Daci_3187 hypothetical protein
YP_004233145.1	KEGG: dac:Daci_3188 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3
YP_004233146.1	PFAM: Hly-III-related; KEGG: vap:Vapar_3228 channel protein, hemolysin III family
YP_004233147.1	KEGG: meh:M301_1126 1-phosphofructokinase
YP_004233148.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004233149.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004233150.1	KEGG: ptm:GSPATT00022591001 hypothetical protein
YP_004233151.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004233152.1	TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; KEGG: dac:Daci_4483 type VI secretion system Vgr family protein
YP_004233153.1	PFAM: Protein of unknown function DUF2169; KEGG: pmr:PMI1119 hypothetical protein
YP_004233154.1	KEGG: pmr:PMI1120 rhs-family protein
YP_004233155.1	KEGG: cro:ROD_35351 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF1911
YP_004233156.1	KEGG: cro:ROD_35351 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF1911
YP_004233157.1	PFAM: Domain of unknown function DUF1911; Domain of unknown function DUF1910; KEGG: cro:ROD_35351 hypothetical protein
YP_004233158.1	KEGG: dac:Daci_0705 hypothetical protein
YP_004233159.1	manually curated; KEGG: xac:XAC2606 hypothetical protein
YP_004233160.1	KEGG: pol:Bpro_4500 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004233161.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vap:Vapar_3328 tripartite ATP-independent periplasmic transporter DctQ component
YP_004233162.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: lch:Lcho_2456 hypothetical protein
YP_004233163.1	KEGG: lch:Lcho_2457 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004233164.1	KEGG: lch:Lcho_2458 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004233165.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: lch:Lcho_2459 LysR family transcriptional regulator
YP_004233166.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_4363 transcriptional regulator, LysR family
YP_004233167.1	PFAM: Pirin, N-terminal; KEGG: ctt:CtCNB1_4362 pirin-like protein
YP_004233168.1	PFAM: Isochorismatase-like; KEGG: ctt:CtCNB1_4361 isochorismatase hydrolase
YP_004233169.1	PFAM: Amidohydrolase 3; KEGG: vap:Vapar_5470 amidohydrolase 3
YP_004233170.1	PFAM: Uncharacterised protein family YphA; KEGG: vap:Vapar_5469 DoxX family protein
YP_004233171.1	PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: ctt:CtCNB1_4358 hypothetical membrane protein
YP_004233173.1	PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; KEGG: dia:Dtpsy_0442 molybdopterin oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain
YP_004233174.1	PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_4876 extracellular ligand-binding receptor
YP_004233175.1	TIGRFAM: Acetylornithine deacetylase (ArgE); KEGG: vap:Vapar_0331 acetylornithine deacetylase (ArgE); PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004233176.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ajs:Ajs_0453 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004233177.1	PFAM: Protein of unknown function DUF2817; KEGG: pol:Bpro_2110 hypothetical protein
YP_004233178.1	KEGG: bxe:Bxe_B2682 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004233179.1	PFAM: Acyl-CoA-binding protein, ACBP; KEGG: dia:Dtpsy_0446 acyl-coA-binding protein ACBP
YP_004233180.1	PFAM: aminopeptidase; KEGG: dia:Dtpsy_0447 putative zinc protease protein
YP_004233181.1	KEGG: ajs:Ajs_0457 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase
YP_004233182.1	KEGG: dia:Dtpsy_0450 hypothetical protein
YP_004233183.1	KEGG: dia:Dtpsy_0451 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase
YP_004233184.1	PFAM: Protein of unknown function DUF1840; KEGG: dia:Dtpsy_0452 hypothetical protein
YP_004233185.1	KEGG: ajs:Ajs_0462 hypothetical protein
YP_004233186.1	KEGG: vei:Veis_0488 hypothetical protein
YP_004233187.1	PFAM: AMP-dependent synthetase/ligase; KEGG: ajs:Ajs_0464 putative phenylacetate-CoA ligase
YP_004233188.1	KEGG: dac:Daci_1154 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004233189.1	KEGG: dac:Daci_1155 hypothetical protein
YP_004233190.1	PFAM: ABC transporter permease; KEGG: dac:Daci_1156 inner-membrane translocator
YP_004233191.1	PFAM: ABC transporter permease; KEGG: vap:Vapar_5008 inner-membrane translocator
YP_004233192.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1158 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233193.1	KEGG: pna:Pnap_3607 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004233194.1	KEGG: dia:Dtpsy_0462 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; SMART: ATPase, AAA+ type, core
YP_004233195.1	KEGG: ajs:Ajs_0472 hypothetical protein
YP_004233196.1	KEGG: vei:Veis_0460 FG-GAP repeat-containing protein
YP_004233197.1	PFAM: Transglutaminase-like; KEGG: vei:Veis_0459 transglutaminase domain-containing protein
YP_004233198.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004233199.1	KEGG: vei:Veis_0459 transglutaminase domain-containing protein
YP_004233201.1	KEGG: pti:PHATRDRAFT_32893 hypothetical protein
YP_004233202.1	KEGG: rha:RHA1_ro02546 zinc ABC transporter permease
YP_004233203.1	KEGG: kpe:KPK_4437 site-specific recombinase, phage integrase family
YP_004233204.1	KEGG: ajs:Ajs_0020 methyl-accepting chemotaxis sensory transducer
YP_004233205.1	KEGG: cme:CMJ257C single subunit mitochondrial RNA polymerase
YP_004233206.1	KEGG: scl:sce5834 protein kinase
YP_004233207.1	PFAM: Peptidase M48; KEGG: dia:Dtpsy_3004 peptidase M48 Ste24p
YP_004233208.1	PFAM: Protein of unknown function DUF898; KEGG: dia:Dtpsy_3003 protein of unknown function DUF898 transmembrane
YP_004233209.1	SMART: RNA-binding S4; KEGG: dia:Dtpsy_3002 RNA-binding S4 domain protein
YP_004233210.1	KEGG: vei:Veis_1888 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; NUDIX hydrolase domain; SMART: Beta-lactamase-like
YP_004233211.1	PFAM: Monooxygenase, FAD-binding; KEGG: scl:sce4897 hypothetical protein
YP_004233212.1	KEGG: cti:RALTA_A0532 putative transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004233213.1	KEGG: pna:Pnap_0805 hypothetical protein
YP_004233214.1	KEGG: ctt:CtCNB1_3961 chromate transporter; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter
YP_004233215.1	PFAM: Helix-turn-helix, HxlR type; KEGG: bvi:Bcep1808_5860 HxlR family transcriptional regulator
YP_004233216.1	PFAM: Flavodoxin-like fold; KEGG: bvi:Bcep1808_5861 (acyl-carrier-protein) phosphodiesterase
YP_004233217.1	KEGG: bvi:Bcep1808_5862 NmrA family protein
YP_004233218.1	PFAM: DSBA-like thioredoxin domain; KEGG: atu:Atu5011 polyketide biosynthesis dithiol-disulfide isomerase
YP_004233219.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: bvi:Bcep1808_1618 glutathione S-transferase domain-containing protein
YP_004233220.1	KEGG: dia:Dtpsy_2998 diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; PFAM: Diaminopimelate epimerase
YP_004233221.1	PFAM: Protein of unknown function DUF484; KEGG: dia:Dtpsy_2997 protein of unknown function DUF484
YP_004233222.1	PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: dia:Dtpsy_2996 tyrosine recombinase XerC
YP_004233223.1	PFAM: Protein of unknown function DUF187; KEGG: rsl:RPSI07_mp0678 putative lipoprotein YddW precursor
YP_004233224.1	KEGG: lch:Lcho_3216 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004233225.1	KEGG: hau:Haur_5184 hypothetical protein
YP_004233226.1	KEGG: ajs:Ajs_3685 SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_004233227.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: xau:Xaut_2488 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAS
YP_004233228.1	KEGG: dac:Daci_1456 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
YP_004233229.1	TIGRFAM: RNA polymerase-binding, DksA; KEGG: dia:Dtpsy_2993 transcriptional regulator, TraR/DksA family
YP_004233230.1	KEGG: dia:Dtpsy_2992 hypothetical protein
YP_004233231.1	KEGG: dac:Daci_1459 ATP-dependent protease peptidase subunit; TIGRFAM: ATP-dependent protease, HslV subunit; PFAM: Proteasome, subunit alpha/beta
YP_004233232.1	TIGRFAM: Heat shock protein HslU; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; KEGG: ajs:Ajs_3680 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase, AAA+ type, core
YP_004233233.1	PFAM: MraZ domain; manually curated; TIGRFAM: MraZ; KEGG: vap:Vapar_0910 cell division protein MraZ; HAMAP: MraZ
YP_004233234.1	KEGG: ctt:CtCNB1_4122 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW
YP_004233235.1	KEGG: dia:Dtpsy_2987 cell division protein FtsL; TIGRFAM: Cell division protein, FtsL -like; PFAM: Cell division protein FtsL
YP_004233236.1	KEGG: dia:Dtpsy_2986 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain
YP_004233237.1	TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: dia:Dtpsy_2985 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004233238.1	TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: dia:Dtpsy_2984 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D -alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004233239.1	KEGG: dia:Dtpsy_2983 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
YP_004233240.1	KEGG: dia:Dtpsy_2982 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004233241.1	KEGG: ajs:Ajs_3671 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein
YP_004233242.1	KEGG: dac:Daci_1470 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28
YP_004233243.1	TIGRFAM: UDP-N-acetylmuramate-alanine ligase; KEGG: dia:Dtpsy_2979 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004233244.1	PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; TIGRFAM: D-alanine--D-alanine ligase; HAMAP: D-alanine--D-alanine ligase; KEGG: dia:Dtpsy_2978 D-alanine--D-alanine ligase
YP_004233245.1	PFAM: Cell division protein FtsQ; Polypeptide-transport-associated, FtsQ-type; KEGG: dia:Dtpsy_2977 cell division protein FtsQ
YP_004233246.1	TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: dia:Dtpsy_2976 cell division protein FtsA; SMART: Cell division protein FtsA domain
YP_004233247.1	TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; KEGG: dia:Dtpsy_2975 cell division protein FtsZ; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain
YP_004233248.1	KEGG: dia:Dtpsy_2973 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase
YP_004233249.1	KEGG: pol:Bpro_1082 hypothetical protein
YP_004233250.1	KEGG: dia:Dtpsy_2971 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC
YP_004233251.1	KEGG: dia:Dtpsy_2970 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233252.1	KEGG: dia:Dtpsy_2969 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233253.1	KEGG: ctt:CtCNB1_4106 hypothetical protein
YP_004233254.1	TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: vei:Veis_2947 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC
YP_004233255.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: vap:Vapar_0931 phosphatidate cytidylyltransferase
YP_004233256.1	KEGG: vap:Vapar_0932 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004233257.1	KEGG: rme:Rmet_4047 extra-cytoplasmic solute receptor
YP_004233258.1	PFAM: Cupin 2, conserved barrel; KEGG: pol:Bpro_3856 cupin 2, barrel
YP_004233259.1	PFAM: Aldehyde-lyase domain; KEGG: rhi:NGR_b04560 putative 4-hydroxy-2-oxovalerate aldolase
YP_004233261.1	KEGG: vei:Veis_3062 DNA-binding transcriptional activator MhpR; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004233262.1	KEGG: ajs:Ajs_3657 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: Monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: Glycosyl transferase, family 51
YP_004233263.1	KEGG: ajs:Ajs_3656 shikimate 5-dehydrogenase; TIGRFAM: Shikimate dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004233264.1	TIGRFAM: TonB, C-terminal; KEGG: ajs:Ajs_3655 TonB family protein
YP_004233265.1	KEGG: ajs:Ajs_3654 ribonuclease II; PFAM: Ribonuclease II/R; SMART: Ribonuclease II/R
YP_004233266.1	PFAM: Protein of unknown function DUF3366; O-antigen ligase-related; KEGG: dia:Dtpsy_2960 O-antigen polymerase
YP_004233267.1	PFAM: Uncharacterised protein family UPF0227/Esterase YqiA; KEGG: dia:Dtpsy_2959 protein of unknown function UPF0227
YP_004233268.1	KEGG: dia:Dtpsy_2957 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein
YP_004233269.1	PFAM: Amidase; KEGG: rpf:Rpic12D_0498 amidase
YP_004233270.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dia:Dtpsy_2956 peptidase U62 modulator of DNA gyrase
YP_004233271.1	KEGG: bgl:bglu_2g07000 hypothetical protein
YP_004233272.1	KEGG: dia:Dtpsy_2955 hypothetical protein
YP_004233273.1	TIGRFAM: DHAP synthase, class 1; KEGG: pol:Bpro_1094 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004233274.1	KEGG: dia:Dtpsy_2953 hypothetical protein
YP_004233275.1	TIGRFAM: Murein peptide ligase; KEGG: ajs:Ajs_3642 UDP-N-acetylmuramate; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal
YP_004233276.1	KEGG: dia:Dtpsy_2951 hypothetical protein
YP_004233277.1	PFAM: Redoxin; KEGG: ajs:Ajs_3640 redoxin domain-containing protein
YP_004233278.1	KEGG: dia:Dtpsy_2949 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment
YP_004233280.1	SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: dia:Dtpsy_2948 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal
YP_004233281.1	KEGG: dia:Dtpsy_2947 ribosomal protein L11 methyltransferase; TIGRFAM: Ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase, PrmA
YP_004233282.1	KEGG: dac:Daci_1497 zinc finger-domain-containing protein; TIGRFAM: Zinc finger/thioredoxin putative; PFAM: Protein of unknown function DUF3426
YP_004233283.1	KEGG: ajs:Ajs_3635 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004233284.1	KEGG: dac:Daci_1499 hypothetical protein
YP_004233285.1	KEGG: dia:Dtpsy_2943 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase
YP_004233286.1	KEGG: vap:Vapar_0956 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone
YP_004233287.1	KEGG: dac:Daci_1502 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2
YP_004233288.1	KEGG: dia:Dtpsy_2940 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004233289.1	KEGG: vei:Veis_1499 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004233290.1	KEGG: ajs:Ajs_3628 hypothetical protein
YP_004233291.1	PFAM: Cytochrome c assembly protein; KEGG: ajs:Ajs_3627 cytochrome c assembly protein
YP_004233292.1	TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: dia:Dtpsy_2936 signal recognition particle protein; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core
YP_004233293.1	PFAM: Glycosyl transferase, family 2; KEGG: vap:Vapar_0963 glucosyltransferase MdoH
YP_004233294.1	KEGG: vap:Vapar_0965 putative two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004233295.1	KEGG: vap:Vapar_0966 hypothetical protein
YP_004233296.1	KEGG: pol:Bpro_1119 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004233297.1	TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; KEGG: dia:Dtpsy_2935 (dimethylallyl)adenosine tRNA methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB
YP_004233298.1	KEGG: dia:Dtpsy_2934 hypothetical protein
YP_004233299.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: asa:ASA_2265 acetyltransferase
YP_004233300.1	KEGG: nha:Nham_3721 PepSY-associated TM helix
YP_004233301.1	KEGG: nha:Nham_3720 hypothetical protein
YP_004233302.1	KEGG: pct:PC1_1522 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; SMART: Secretin/TonB, short N-terminal
YP_004233303.1	PFAM: FecR protein; KEGG: neu:NE1095 putative transmembrane sensor
YP_004233304.1	KEGG: neu:NE1096 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004233305.1	KEGG: dac:Daci_2755 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004233306.1	KEGG: dac:Daci_2754 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004233307.1	KEGG: dac:Daci_2753 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004233308.1	KEGG: dac:Daci_2752 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004233309.1	KEGG: dac:Daci_2751 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004233310.1	PFAM: Protein of unknown function DUF2252; KEGG: bpy:Bphyt_5889 hypothetical protein
YP_004233311.1	KEGG: mlo:mlr5224 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004233312.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: hse:Hsero_0956 dibenzothiophene desulfurization flavin reductase
YP_004233313.1	KEGG: hse:Hsero_0955 hypothetical protein
YP_004233314.1	PFAM: ABC transporter permease; KEGG: hse:Hsero_0954 branched-chain amino acid ABC transporter permease
YP_004233315.1	PFAM: ABC transporter permease; KEGG: hse:Hsero_0953 branched-chain amino acid ABC transporter permease
YP_004233316.1	PFAM: ABC transporter-like; KEGG: azl:AZL_b05590 branched-chain amino acid transport system ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004233317.1	KEGG: hse:Hsero_0951 coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase; PFAM: Luciferase-like, subgroup
YP_004233318.1	KEGG: dac:Daci_2548 FMN reductase; TIGRFAM: FMN reductase, MsuE-like; PFAM: NADPH-dependent FMN reductase
YP_004233319.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: xac:XAC0846 FMNH2-dependent monooxygenase
YP_004233320.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: bur:Bcep18194_C7715 acyl-CoA dehydrogenase-like
YP_004233321.1	KEGG: hse:Hsero_0949 sigma-54 dependent transcription regulator protein; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004233322.1	PFAM: Crotonase, core; KEGG: dac:Daci_1529 enoyl-CoA hydratase/isomerase
YP_004233323.1	KEGG: dia:Dtpsy_2932 peptidase M61 domain protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF
YP_004233324.1	PFAM: Disulphide bond isomerase, DsbC/G, N-terminal; KEGG: ajs:Ajs_3621 thiol:disulfide interchange protein DsbC
YP_004233325.1	KEGG: ajs:Ajs_3620 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6; PFAM: Monooxygenase, FAD-binding
YP_004233326.1	PFAM: MOSC, N-terminal beta barrel; Molybdenum cofactor sulfurase, C-terminal; KEGG: dia:Dtpsy_2929 MOSC domain protein beta barrel domain protein
YP_004233327.1	KEGG: dac:Daci_1534 GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related
YP_004233328.1	PFAM: ATPase, AAA-4; KEGG: rhi:NGR_b04140 ATP-dependent DNA helicase
YP_004233329.1	KEGG: mpt:Mpe_A0317 CBS domain-containing protein; PFAM: HPP; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004233330.1	KEGG: rfr:Rfer_4018 RarD protein; TIGRFAM: RarD protein; PFAM: Drug/metabolite transporter
YP_004233331.1	KEGG: vei:Veis_3029 hypothetical protein
YP_004233332.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: har:HEAR3185 hypothetical protein; SMART: Diguanylate cyclase, predicted
YP_004233333.1	KEGG: dia:Dtpsy_2909 TIM-barrel protein, nifR3 family; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; PFAM: tRNA-dihydrouridine synthase
YP_004233334.1	PFAM: Helix-turn-helix, Fis-type; KEGG: dia:Dtpsy_2908 transcriptional regulator, fis family
YP_004233335.1	SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: dac:Daci_1564 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain
YP_004233336.1	PFAM: Pectate lyase, catalytic; KEGG: rso:RSc2775 harpin-like protein
YP_004233337.1	TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: dia:Dtpsy_2904 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III
YP_004233338.1	PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: vei:Veis_3023 phosphomethylpyrimidine kinase type-1
YP_004233339.1	KEGG: cti:RALTA_A0721 rubredoxin; manually curated; PFAM: Rubredoxin-type Fe(Cys)4 protein
YP_004233340.1	KEGG: dia:Dtpsy_2901 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004233341.1	KEGG: dia:Dtpsy_2900 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004233342.1	KEGG: ajs:Ajs_3576 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004233343.1	KEGG: dia:Dtpsy_2898 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233344.1	manually curated; PFAM: Signal transduction response regulator, receiver domain; CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; KEGG: dia:Dtpsy_2897 CheA signal transduction histidine kinase; SMART: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain; CheW-like protein
YP_004233345.1	KEGG: mpt:Mpe_A0704 deoxyribodipyrimidine photo-lyase type I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal
YP_004233346.1	manually curated; HAMAP: Protein of unknown function DUF179; KEGG: dia:Dtpsy_2896 protein of unknown function DUF179; PFAM: Protein of unknown function DUF179
YP_004233347.1	TIGRFAM: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: ajs:Ajs_3572 Holliday junction resolvase-like protein; SMART: Resolvase, RNase H-like fold
YP_004233348.1	KEGG: dia:Dtpsy_2894 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase
YP_004233349.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; HAMAP: Aspartate carbamoyltransferase, eukaryotic; KEGG: vap:Vapar_4614 aspartate carbamoyltransferase catalytic subunit
YP_004233350.1	KEGG: dia:Dtpsy_2892 amidohydrolase
YP_004233351.1	KEGG: vei:Veis_1512 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004233352.1	KEGG: bge:BC1002_0178 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; Transcription regulator TrmB, N-terminal; SMART: Transcription regulator AsnC-type
YP_004233353.1	PFAM: Protein of unknown function DUF2257; KEGG: pay:PAU_00240 hypothetical protein
YP_004233354.1	PFAM: Protein of unknown function DUF340, prokaryotic membrane; KEGG: bpt:Bpet1335 hypothetical protein
YP_004233355.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: ajs:Ajs_3566 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233356.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_2888 binding-protein-dependent transport systems inner membrane component
YP_004233357.1	KEGG: dac:Daci_1593 arsenate reductase; TIGRFAM: Arsenate reductase; PFAM: Arsenate reductase-like
YP_004233358.1	TIGRFAM: Type II secretion system GspE; PFAM: Type II secretion system protein E; KEGG: dac:Daci_5698 general secretory pathway protein E; SMART: ATPase, AAA+ type, core
YP_004233359.1	KEGG: ajs:Ajs_0667 general secretion pathway protein D; TIGRFAM: Type II secretion system GspD; PFAM: Type II/III secretion system; NolW-like
YP_004233360.1	KEGG: dia:Dtpsy_0647 putative general secretory pathway N transmembrane protein
YP_004233361.1	PFAM: General secretion pathway M protein; KEGG: dia:Dtpsy_0648 hypothetical protein
YP_004233362.1	PFAM: General secretion pathway L; KEGG: ajs:Ajs_0670 general secretion pathway L
YP_004233363.1	KEGG: ajs:Ajs_0671 general secretion pathway protein K
YP_004233364.1	KEGG: ajs:Ajs_0672 hypothetical protein
YP_004233365.1	KEGG: ajs:Ajs_0673 general secretion pathway protein I; TIGRFAM: General secretion pathway protein I; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein I/J; Prepilin-type cleavage/methylation, N-terminal
YP_004233366.1	TIGRFAM: Bacterial general secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal; KEGG: dia:Dtpsy_0653 general secretion pathway protein H
YP_004233367.1	KEGG: dia:Dtpsy_0654 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_004233368.1	KEGG: dia:Dtpsy_0655 hypothetical protein
YP_004233369.1	KEGG: dac:Daci_5687 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004233370.1	PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; KEGG: dia:Dtpsy_0657 cobalamin-5-phosphate synthase CobS
YP_004233371.1	KEGG: dia:Dtpsy_0658 threonine dehydratase; TIGRFAM: Threonine dehydratase I; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal
YP_004233372.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: dia:Dtpsy_0659 OsmC family protein
YP_004233373.1	PFAM: Ubiquinone biosynthesis-like protein; KEGG: dia:Dtpsy_0660 putative ubiquinone biosynthesis protein
YP_004233374.1	KEGG: ajs:Ajs_0682 porin
YP_004233375.1	KEGG: ctt:CtCNB1_0642 gram-negative type outer membrane porin protein
YP_004233376.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0664 binding-protein-dependent transport systems inner membrane component
YP_004233377.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: ajs:Ajs_0687 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004233378.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pol:Bpro_2113 extracellular solute-binding protein
YP_004233379.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0667 binding-protein-dependent transport systems inner membrane component
YP_004233380.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0668 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: Oligopeptide/dipeptide ABC transporter, C-terminal; ABC transporter-like
YP_004233381.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0669 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004233382.1	KEGG: ade:Adeh_0129 methyltransferase type 11
YP_004233383.1	PFAM: Uncharacterised protein family YphA; KEGG: vap:Vapar_4416 DoxX family protein
YP_004233384.1	KEGG: dac:Daci_0740 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233385.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5678 TetR family transcriptional regulator
YP_004233386.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: dac:Daci_5677 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004233387.1	PFAM: Protein of unknown function DUF2268, Zn-dependent protease-related; KEGG: ddr:Deide_20870 hypothetical protein
YP_004233388.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: ajs:Ajs_0694 RpiR family transcriptional regulator
YP_004233389.1	TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: dia:Dtpsy_0673 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding
YP_004233390.1	KEGG: dia:Dtpsy_0674 transaldolase B; TIGRFAM: Transaldolase 1; PFAM: Transaldolase
YP_004233391.1	KEGG: ajs:Ajs_0697 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI)
YP_004233392.1	KEGG: bgl:bglu_2g04490 putative methyl-accepting chemotaxis receptor protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Cache; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233393.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vap:Vapar_1108 extracellular solute-binding protein family 1
YP_004233394.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1109 binding-protein-dependent transport systems inner membrane component
YP_004233395.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1110 binding-protein-dependent transport systems inner membrane component
YP_004233396.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: vap:Vapar_1111 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233397.1	KEGG: vap:Vapar_1112 mannitol dehydrogenase domain protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal
YP_004233398.1	KEGG: vap:Vapar_1113 sorbitol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004233399.1	PFAM: Transaldolase; KEGG: vap:Vapar_1114 transaldolase
YP_004233400.1	KEGG: vap:Vapar_1115 PfkB domain protein; PFAM: Carbohydrate/purine kinase
YP_004233401.1	KEGG: vap:Vapar_1116 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004233402.1	KEGG: vap:Vapar_1117 xylulokinase; TIGRFAM: Xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004233403.1	KEGG: xtr:100488495 60 kDa chaperonin-like; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1
YP_004233404.1	KEGG: dia:Dtpsy_0678 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10
YP_004233405.1	TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; KEGG: rce:RC1_0708 translation elongation factor G FusA; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal
YP_004233406.1	KEGG: nml:Namu_5081 beta-lactamase
YP_004233407.1	PFAM: Carbamoyltransferase; KEGG: pag:PLES_32531 putative carbamoyl transferase
YP_004233408.1	KEGG: rca:Rcas_2506 hypothetical protein
YP_004233409.1	PFAM: Protein of unknown function DUF2304; KEGG: eba:ebA1563 hypothetical protein
YP_004233410.1	TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: xtr:100492149 xanthan biosynthesis protein xanB-like; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase
YP_004233411.1	PFAM: Glycosyl transferase, family 2; KEGG: dma:DMR_38180 putative glycosyltransferase
YP_004233412.1	KEGG: mba:Mbar_A1908 hypothetical protein
YP_004233413.1	PFAM: Glycosyl transferase, family 2; KEGG: bpb:bpr_I0393 glycosyl transferase GT2 family protein
YP_004233414.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: nmu:Nmul_A0726 GCN5-related N-acetyltransferase
YP_004233415.1	KEGG: chu:CHU_3000 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase
YP_004233416.1	KEGG: mcu:HMPREF0573_11070 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004233417.1	PFAM: Polysaccharide biosynthesis protein; KEGG: tko:TK1719 capsular polysaccharide biosynthesis protein
YP_004233418.1	KEGG: bpb:bpr_I0395 hypothetical protein
YP_004233419.1	TIGRFAM: GDP-mannose 4,6-dehydratase; KEGG: rlg:Rleg_0439 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004233420.1	KEGG: slt:Slit_2901 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004233421.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: cpb:Cphamn1_1930 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004233422.1	PFAM: Protein of unknown function DUF2079, membrane; KEGG: dma:DMR_43600 hypothetical membrane protein
YP_004233423.1	KEGG: dma:DMR_43610 hypothetical membrane protein
YP_004233424.1	PFAM: Polysaccharide biosynthesis protein; KEGG: dma:DMR_17300 putative polysaccharide biosynthesis protein
YP_004233425.1	PFAM: Glycosyl transferase, group 1; KEGG: nhl:Nhal_3659 glycosyl transferase group 1
YP_004233426.1	PFAM: Glycosyl transferase, group 1; KEGG: eba:ebA1565 glycosyl transferase
YP_004233427.1	PFAM: Tetratricopeptide TPR-1; KEGG: eba:ebA1575 hypothetical protein
YP_004233428.1	PFAM: Transcription regulator YcdC, C-terminal; Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: vei:Veis_4153 TetR family transcriptional regulator
YP_004233429.1	KEGG: vei:Veis_4152 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004233430.1	TIGRFAM: Dihydroorotate dehydrogenase, class 1; KEGG: dac:Daci_2862 dihydropyrimidine dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2
YP_004233431.1	KEGG: dac:Daci_2863 NCS1 nucleoside transporter; TIGRFAM: Nucleobase cation symporter-1, NCS1; PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin
YP_004233432.1	TIGRFAM: D-hydantoinase; KEGG: xtr:100486923 d-hydantoinase/dihydropyrimidinase-like; PFAM: Amidohydrolase 1
YP_004233433.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dac:Daci_2865 amidase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004233434.1	PFAM: Peptidoglycan binding-like; Curli production assembly/transport component CsgG; KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein
YP_004233435.1	KEGG: dac:Daci_3862 hypothetical protein
YP_004233436.1	KEGG: dac:Daci_3861 hypothetical protein
YP_004233437.1	KEGG: dia:Dtpsy_0679 cytidyltransferase-related domain protein; TIGRFAM: Cytidyltransferase-related; PFAM: NUDIX hydrolase domain; Cytidylyltransferase
YP_004233438.1	TIGRFAM: NAD synthase; KEGG: dac:Daci_5607 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004233439.1	KEGG: dac:Daci_5606 nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like
YP_004233440.1	KEGG: ajs:Ajs_0702 hypothetical protein
YP_004233441.1	KEGG: pna:Pnap_0032 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328
YP_004233442.1	TIGRFAM: S-adenosylmethionine synthetase; KEGG: dia:Dtpsy_0683 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal
YP_004233443.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: ajs:Ajs_0706 lipid A biosynthesis acyltransferase
YP_004233444.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: xtr:100494259 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase-like
YP_004233445.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dia:Dtpsy_0688 alpha/beta hydrolase fold protein
YP_004233446.1	PFAM: GTP-binding protein, HSR1-related; manually curated; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; KEGG: ajs:Ajs_0709 ribosome biogenesis GTP-binding protein YsxC; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC
YP_004233447.1	KEGG: ajs:Ajs_0710 cytochrome c, class I; manually curated; PFAM: Cytochrome c, class I
YP_004233448.1	PFAM: Cytochrome c biogenesis protein; KEGG: dia:Dtpsy_0691 ResB family protein
YP_004233449.1	KEGG: ajs:Ajs_0712 cytochrome c assembly protein; TIGRFAM: Cytochrome c-type biogenesis protein CcsA; PFAM: Cytochrome c assembly protein
YP_004233450.1	PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: dia:Dtpsy_0693 putative sulfite oxidase subunit YedY
YP_004233451.1	PFAM: Flavoprotein transmembrane component; KEGG: dia:Dtpsy_0694 ferric reductase domain protein transmembrane component
YP_004233452.1	KEGG: dia:Dtpsy_0695 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004233453.1	TIGRFAM: Diaminopimelate decarboxylase; KEGG: dia:Dtpsy_0696 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal
YP_004233454.1	KEGG: vei:Veis_0024 frataxin family protein; TIGRFAM: Frataxin-like; PFAM: Frataxin-like
YP_004233455.1	KEGG: ajs:Ajs_0729 1A family penicillin-binding protein; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004233456.1	KEGG: ajs:Ajs_0730 type IV pilus assembly protein PilM; TIGRFAM: Type IV pilus assembly protein PilM; SMART: Cell division protein FtsA domain
YP_004233457.1	PFAM: Fimbrial assembly; KEGG: dia:Dtpsy_0700 fimbrial assembly family protein
YP_004233458.1	KEGG: ajs:Ajs_0732 pilus assembly protein, PilO
YP_004233459.1	PFAM: Pilus assembly protein PilP; KEGG: dia:Dtpsy_0702 pilus assembly protein PilP
YP_004233460.1	TIGRFAM: Type IV pilus secretin PilQ; PFAM: Type II/III secretion system; NolW-like; Localisation of periplasmic protein complexes; Secretin/TonB, short N-terminal; KEGG: vei:Veis_0018 type IV pilus secretin PilQ; SMART: Secretin/TonB, short N-terminal
YP_004233461.1	PFAM: Bacterial Ig-like, group 1; KEGG: rfr:Rfer_2924 Ig-like, group 1
YP_004233462.1	HAMAP: Shikimate kinase; KEGG: pna:Pnap_0678 shikimate kinase; PFAM: Shikimate kinase
YP_004233463.1	TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; KEGG: dac:Daci_5574 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB
YP_004233464.1	TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: ajs:Ajs_0736 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004233465.1	PFAM: Protein of unknown function DUF1415; KEGG: dia:Dtpsy_0706 protein of unknown function DUF1415
YP_004233466.1	KEGG: dia:Dtpsy_0707 hypothetical protein
YP_004233467.1	PFAM: Transposase IS200-like; KEGG: vap:Vapar_1151 protein of unknown function DUF1568
YP_004233468.1	KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; Glutamine amidotransferase, class-II
YP_004233469.1	TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: vap:Vapar_1153 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004233470.1	KEGG: ajs:Ajs_0743 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004233471.1	KEGG: ajs:Ajs_0744 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004233472.1	PFAM: ABC transporter-like; KEGG: tmz:Tmz1t_3930 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233473.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0716 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233474.1	KEGG: vap:Vapar_1155 protein of unknown function DUF140; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140
YP_004233475.1	PFAM: Mammalian cell entry-related; KEGG: dia:Dtpsy_0718 mammalian cell entry related domain protein
YP_004233476.1	PFAM: VacJ-like lipoprotein; KEGG: dia:Dtpsy_0719 VacJ family lipoprotein
YP_004233477.1	PFAM: Toluene tolerance Ttg2; KEGG: dia:Dtpsy_0720 toluene tolerance family protein
YP_004233478.1	KEGG: dia:Dtpsy_0721 sulfate transporter/antisigma-factor antagonist STAS
YP_004233479.1	PFAM: Sel1-like; KEGG: zmo:ZMO0137 Sel1 domain-containing protein repeat-containing protein
YP_004233480.1	PFAM: ABC transporter-like; KEGG: ajs:Ajs_0755 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233481.1	PFAM: ABC-2 type transporter; KEGG: vei:Veis_4455 ABC-2 type transporter
YP_004233482.1	PFAM: BolA protein; KEGG: vap:Vapar_1162 BolA family protein
YP_004233483.1	PFAM: Enolpyruvate transferase domain; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: dia:Dtpsy_0725 UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_004233484.1	TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; KEGG: dia:Dtpsy_0726 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase, catalytic domain
YP_004233485.1	KEGG: azc:AZC_4047 hypothetical protein
YP_004233486.1	TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; KEGG: ctt:CtCNB1_0712 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type
YP_004233487.1	PFAM: Protein of unknown function DUF2917; KEGG: lch:Lcho_4184 hypothetical protein
YP_004233488.1	KEGG: lch:Lcho_4183 transcriptional regulator; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004233489.1	KEGG: dac:Daci_5523 hypothetical protein
YP_004233490.1	KEGG: nwa:Nwat_2358 PilT domain-containing protein
YP_004233491.1	TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: ajs:Ajs_0762 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004233492.1	KEGG: ctt:CtCNB1_0718 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004233493.1	KEGG: dia:Dtpsy_0731 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; PFAM: Glutamine amidotransferase class-I, C-terminal
YP_004233494.1	TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; KEGG: ajs:Ajs_0765 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis
YP_004233495.1	PFAM: Spherulation-specific family 4; KEGG: dac:Daci_5517 hypothetical protein
YP_004233496.1	PFAM: Spherulation-specific family 4; KEGG: ajs:Ajs_0766 hypothetical protein
YP_004233497.1	KEGG: ajs:Ajs_0767 putative transmembrane protein
YP_004233498.1	PFAM: Domain of unknown function DUF3492; Glycosyl transferase, group 1; KEGG: ajs:Ajs_0768 glycosyl transferase, group 1
YP_004233499.1	KEGG: ajs:Ajs_0769 putative transmembrane protein
YP_004233500.1	SMART: GAF; KEGG: ajs:Ajs_0770 putative transmembrane protein
YP_004233501.1	KEGG: ajs:Ajs_0771 putative lipoprotein
YP_004233502.1	KEGG: ajs:Ajs_0772 TPR repeat-containing protein
YP_004233503.1	PFAM: TM1410 hypothetical-related protein; Polysaccharide deacetylase; KEGG: ajs:Ajs_0773 polysaccharide deacetylase
YP_004233504.1	TIGRFAM: UDP-glucose 4-epimerase; KEGG: dia:Dtpsy_0737 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase
YP_004233505.1	PFAM: Sodium:dicarboxylate symporter; KEGG: vap:Vapar_1173 sodium:dicarboxylate symporter
YP_004233506.1	PFAM: Aldose 1-epimerase; KEGG: vap:Vapar_1174 aldose 1-epimerase
YP_004233507.1	TIGRFAM: Histidine biosynthesis, HisF; KEGG: dac:Daci_5548 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis
YP_004233508.1	KEGG: ajs:Ajs_0776 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_004233509.1	KEGG: dia:Dtpsy_0740 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like
YP_004233510.1	KEGG: dia:Dtpsy_0741 putative transmembrane protein
YP_004233511.1	PFAM: Patatin/Phospholipase A2-related; KEGG: dia:Dtpsy_0742 patatin
YP_004233512.1	KEGG: dia:Dtpsy_0743 histidine triad (HIT) protein
YP_004233513.1	KEGG: dia:Dtpsy_0744 twin arginine translocase protein A; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106
YP_004233514.1	KEGG: dia:Dtpsy_0745 sec-independent translocase; TIGRFAM: Twin-arginine translocation protein TatB; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106
YP_004233515.1	KEGG: dia:Dtpsy_0746 sec-independent protein translocase, TatC subunit; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase
YP_004233516.1	KEGG: sli:Slin_3245 hypothetical protein
YP_004233517.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004233518.1	PFAM: Peptidase C14, caspase catalytic; KEGG: xau:Xaut_0230 peptidase C14 caspase catalytic subunit P20
YP_004233519.1	KEGG: xau:Xaut_0231 hypothetical protein
YP_004233520.1	KEGG: xau:Xaut_0232 hypothetical protein
YP_004233521.1	KEGG: pfs:PFLU1881 hypothetical protein
YP_004233522.1	KEGG: sna:Snas_0994 transcriptional regulator, SARP family
YP_004233523.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; KEGG: ajs:Ajs_0784 peptidase S1 and S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF
YP_004233524.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_1184 major facilitator superfamily MFS_1
YP_004233525.1	KEGG: aor:AO090011000009 hypothetical protein
YP_004233526.1	KEGG: dia:Dtpsy_0749 protein of unknown function DUF34; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3
YP_004233527.1	KEGG: vap:Vapar_1241 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A
YP_004233528.1	KEGG: pna:Pnap_3246 hypothetical protein; PFAM: Domain of unknown function DUF58; SMART: von Willebrand factor, type A
YP_004233529.1	PFAM: ATPase, AAA-3; KEGG: pna:Pnap_3245 ATPase
YP_004233530.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: pna:Pnap_3244 peptidase S1 and S6, chymotrypsin/Hap
YP_004233531.1	PFAM: Deoxyribonuclease, TatD-related; KEGG: ajs:Ajs_3416 TatD-related deoxyribonuclease
YP_004233532.1	PFAM: Uracil-DNA glycosylase-like; KEGG: xtr:100498459 hypothetical protein LOC100498459
YP_004233533.1	KEGG: dia:Dtpsy_2748 hypothetical protein
YP_004233534.1	KEGG: dia:Dtpsy_2747 type II secretion system protein E; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core
YP_004233535.1	KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468
YP_004233536.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: dac:Daci_5393 hypothetical protein
YP_004233537.1	manually curated; KEGG: dac:Daci_3852 hypothetical protein
YP_004233538.1	manually curated; KEGG: dac:Daci_3852 hypothetical protein
YP_004233539.1	KEGG: dac:Daci_3853 hypothetical protein
YP_004233540.1	PFAM: Drug/metabolite transporter; KEGG: vei:Veis_2234 hypothetical protein
YP_004233541.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_2744 short-chain dehydrogenase/reductase SDR
YP_004233542.1	PFAM: Aldehyde dehydrogenase domain; KEGG: xcv:XCV4345 putative aldehyde dehydrogenase
YP_004233543.1	KEGG: xcv:XCV4347 hypothetical protein
YP_004233544.1	KEGG: xcv:XCV4348 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III
YP_004233545.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: psp:PSPPH_2737 aldolase, putative
YP_004233546.1	KEGG: xcv:XCV4350 xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal
YP_004233547.1	PFAM: Conserved hypothetical protein CHP02001; KEGG: psp:PSPPH_2735 hypothetical protein
YP_004233548.1	PFAM: Protein of unknown function DUF2147; KEGG: psp:PSPPH_2734 hypothetical protein
YP_004233549.1	KEGG: xcv:XCV2053 putative cinnamoyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase
YP_004233550.1	KEGG: xcv:XCV4346 hypothetical protein
YP_004233551.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: xcv:XCV4344 TetR family transcriptional regulator
YP_004233552.1	PFAM: Urease accessory protein UreD; KEGG: pna:Pnap_1004 urease accessory protein UreD
YP_004233553.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dac:Daci_1137 CMP/dCMP deaminase zinc-binding
YP_004233554.1	KEGG: ctt:CtCNB1_4341 twin-arginine translocation pathway signal
YP_004233555.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dac:Daci_1135 2OG-Fe(II) oxygenase
YP_004233556.1	TIGRFAM: Translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; KEGG: dac:Daci_3132 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type
YP_004233557.1	KEGG: dia:Dtpsy_2387 hypothetical protein
YP_004233558.1	KEGG: vap:Vapar_0060 hypothetical protein
YP_004233559.1	KEGG: dac:Daci_2809 hydroxypyruvate isomerase; PFAM: Xylose isomerase, TIM barrel domain
YP_004233560.1	KEGG: sus:Acid_2336 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004233561.1	KEGG: bgl:bglu_2g02250 probable awr type III effector family protein
YP_004233562.1	SMART: ATPase, AAA+ type, core; KEGG: glo:Glov_0436 SMC domain protein
YP_004233563.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3961 binding-protein-dependent transport systems inner membrane component
YP_004233564.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1139 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233565.1	KEGG: dac:Daci_1138 NMT1/THI5-like domain-containing protein
YP_004233566.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: dac:Daci_1141 CMP/dCMP deaminase zinc-binding
YP_004233567.1	KEGG: dac:Daci_2106 malic enzyme; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding
YP_004233568.1	KEGG: dac:Daci_2107 xanthine permease; TIGRFAM: Xanthine permease; Xanthine/uracil permease; PFAM: Xanthine/uracil/vitamin C permease
YP_004233569.1	KEGG: vap:Vapar_3937 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004233570.1	KEGG: vap:Vapar_3936 Asp/Glu/hydantoin racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004233571.1	PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin; KEGG: vap:Vapar_3935 permease for cytosine/purines uracil thiamine allantoin
YP_004233572.1	KEGG: pol:Bpro_1419 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004233573.1	KEGG: dac:Daci_0582 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233574.1	PFAM: Sodium:dicarboxylate symporter; KEGG: pol:Bpro_1420 C4-dicarboxylate transporter DctA
YP_004233575.1	PFAM: Asparagine synthase; KEGG: xac:XAC0059 asparagine synthetase like protein
YP_004233576.1	KEGG: mag:amb1461 hypothetical protein
YP_004233577.1	KEGG: xac:XAC0061 hypothetical protein
YP_004233578.1	KEGG: xac:XAC0062 hypothetical protein
YP_004233579.1	PFAM: Sulfotransferase domain; KEGG: xac:XAC0063 aryl sulfotransferase
YP_004233580.1	KEGG: xac:XAC0068 hypothetical protein
YP_004233581.1	KEGG: xac:XAC0058 hypothetical protein
YP_004233582.1	PFAM: ABC transporter-like; KEGG: xac:XAC0057 transport protein; SMART: ATPase, AAA+ type, core
YP_004233583.1	KEGG: xac:XAC0055 hypothetical protein
YP_004233584.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: xac:XAC0054 degenerated UDP-glucose epimerase
YP_004233585.1	KEGG: xac:XAC0053 methyltransferase
YP_004233586.1	KEGG: xac:XAC0052 hypothetical protein
YP_004233587.1	KEGG: xac:XAC0051 asparagine synthase; PFAM: Asparagine synthase
YP_004233588.1	PFAM: Methyltransferase type 12; KEGG: xac:XAC0050 hypothetical protein
YP_004233589.1	KEGG: xac:XAC0049 hypothetical protein
YP_004233590.1	KEGG: xac:XAC0048 hypothetical protein
YP_004233591.1	PFAM: Glycosyl transferase, group 1; KEGG: xac:XAC0047 galactosyltransferase
YP_004233592.1	TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: xac:XAC0046 UDP-N-acetyl-D-mannosamine transferase; PFAM: Glycosyl transferase WecB/TagA/CpsF
YP_004233593.1	PFAM: O-antigen ligase-related; KEGG: xac:XAC0045 hypothetical protein
YP_004233594.1	TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: xac:XAC0043 UDP-glucose lipid carrier transferase; PFAM: Bacterial sugar transferase
YP_004233595.1	KEGG: dia:Dtpsy_1035 peptidase dimerisation domain protein; TIGRFAM: Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20, dimerisation; Peptidase M20
YP_004233596.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1; KEGG: ajs:Ajs_1115 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Peptidase M20, dimerisation; Peptidase M20
YP_004233597.1	TIGRFAM: Putative urate catabolism protein; KEGG: vap:Vapar_3927 urate catabolism protein; PFAM: Polysaccharide deacetylase
YP_004233598.1	KEGG: pol:Bpro_1425 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004233599.1	KEGG: ctt:CtCNB1_3712 MofrL; PFAM: MOFRL domain
YP_004233600.1	TIGRFAM: Esterase, PHB depolymerase; KEGG: mpt:Mpe_A2650 hypothetical protein
YP_004233601.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: xtr:100498285 gamma-glutamyltranspeptidase-like; PFAM: Gamma-glutamyltranspeptidase
YP_004233602.1	TIGRFAM: Hydroxyisourate hydrolase; KEGG: dia:Dtpsy_1043 hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase
YP_004233603.1	KEGG: pol:Bpro_1428 hypothetical protein
YP_004233604.1	KEGG: ajs:Ajs_1125 hypothetical protein; TIGRFAM: Xanthine dehydrogenase accessory protein XdhC; PFAM: XdhC- CoxI
YP_004233605.1	PFAM: Protein of unknown function DUF989; KEGG: pol:Bpro_1430 putative transmembrane protein
YP_004233606.1	KEGG: ajs:Ajs_3107 diguanylate cyclase/phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004233607.1	KEGG: dac:Daci_5322 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004233608.1	KEGG: dac:Daci_5321 histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Cache, type 2; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004233609.1	KEGG: dac:Daci_5320 endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP
YP_004233610.1	PFAM: Aminotransferase, class V/Cysteine desulfurase; KEGG: dac:Daci_5319 aminotransferase class V
YP_004233611.1	PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_2452 porin gram-negative type
YP_004233612.1	KEGG: dia:Dtpsy_2451 transcriptional regulator, Crp/Fnr family; PFAM: HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp
YP_004233613.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: bpy:Bphyt_4845 2OG-Fe(II) oxygenase
YP_004233614.1	PFAM: FAD dependent oxidoreductase; KEGG: pfs:PFLU1775 putative oxidoreductase
YP_004233615.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; KEGG: ajs:Ajs_3104 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004233616.1	KEGG: rso:RS04760 putative rhs-related protein
YP_004233617.1	KEGG: rsc:RCFBP_10063 putative type III effector protein (SKWP1)
YP_004233618.1	KEGG: cti:RALTA_A1907 conserved hypothetical protein YfgM
YP_004233619.1	TIGRFAM: Xanthine dehydrogenase, molybdopterin binding subunit; KEGG: dia:Dtpsy_2449 xanthine dehydrogenase, molybdopterin binding subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004233620.1	TIGRFAM: Xanthine dehydrogenase, small subunit; KEGG: vei:Veis_5002 molybdopterin dehydrogenase, FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; Ferredoxin; CO dehydrogenase flavoprotein, C-terminal; [2Fe-2S]-binding
YP_004233621.1	KEGG: der:Dere_GG10480 GG10480 gene product from transcript GG10480-RA
YP_004233622.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2447 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233623.1	PFAM: ABC transporter permease; KEGG: dac:Daci_2136 inner-membrane translocator
YP_004233624.1	PFAM: ABC transporter permease; KEGG: dac:Daci_2137 inner-membrane translocator
YP_004233625.1	PFAM: Basic membrane lipoprotein; KEGG: vap:Vapar_3900 basic membrane lipoprotein
YP_004233626.1	KEGG: bpt:Bpet2327 putative N-acyl-D-amino-acid deacylase; PFAM: Amidohydrolase 3; D-aminoacylase, C-terminal
YP_004233627.1	KEGG: bpt:Bpet2328 putative secreted protein
YP_004233628.1	KEGG: bpt:Bpet2330 carbon-nitrogen hydrolase family protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004233629.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bbr:BB4719 LysR family transcriptional regulator
YP_004233630.1	PFAM: FAD dependent oxidoreductase; KEGG: xtr:100491525 hypothetical protein LOC100491525
YP_004233631.1	PFAM: ABC transporter-like; KEGG: rso:RSc3408 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004233632.1	KEGG: rso:RSc3409 amino-acid transmembrane ABC transporter protein; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004233633.1	KEGG: rsl:RPSI07_0031 putative amino acid-binding periplasmic (Pbp) abc transporter protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004233634.1	KEGG: rsl:RPSI07_0030 transcription regulator protein, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004233635.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_2143 Rieske (2Fe-2S) domain-containing protein
YP_004233636.1	KEGG: vap:Vapar_3891 hypothetical protein
YP_004233637.1	TIGRFAM: Adenosine deaminase; KEGG: vap:Vapar_3887 adenosine deaminase; PFAM: Adenosine/AMP deaminase
YP_004233638.1	SMART: Helix-turn-helix, AraC type, DNA binding domain; KEGG: vap:Vapar_3884 transcriptional regulator, AraC family
YP_004233639.1	PFAM: Peptidase S45, penicillin amidase; KEGG: dia:Dtpsy_2441 peptidase S45 penicillin amidase
YP_004233640.1	KEGG: dia:Dtpsy_2455 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004233641.1	PFAM: Basic membrane lipoprotein; KEGG: rfr:Rfer_3296 basic membrane lipoprotein
YP_004233642.1	TIGRFAM: Guanine deaminase; KEGG: ajs:Ajs_1129 guanine deaminase; PFAM: Amidohydrolase 1
YP_004233643.1	TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: pol:Bpro_1505 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain
YP_004233644.1	KEGG: tbr:Tb10.26.0260 hypothetical protein
YP_004233645.1	KEGG: xal:XALc_0084 hypothetical atpase of the aaa+ class protein
YP_004233646.1	PFAM: Uncharacterised protein family, zinc metallopeptidase putative; KEGG: dac:Daci_2154 protein of unknown function zinc metallopeptidase putative
YP_004233647.1	KEGG: dia:Dtpsy_1053 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004233648.1	TIGRFAM: Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); KEGG: xtr:100492823 bis(5'-nucleosyl)-tetraphosphatase, symmetrical-like; PFAM: Metallo-dependent phosphatase
YP_004233649.1	KEGG: dia:Dtpsy_1065 histone family protein nucleoid-structuring protein H-NS; PFAM: Histone-like nucleoid-structuring protein H-NS; SMART: Histone-like nucleoid-structuring protein H-NS
YP_004233650.1	TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: ajs:Ajs_1145 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004233651.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; Diguanylate cyclase, predicted; PAS fold-3; KEGG: vei:Veis_1343 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004233652.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; Diguanylate cyclase, predicted; KEGG: vei:Veis_1344 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004233653.1	PFAM: Monooxygenase, FAD-binding; KEGG: dia:Dtpsy_1067 monooxygenase FAD-binding
YP_004233654.1	KEGG: vei:Veis_4386 major facilitator transporter
YP_004233655.1	KEGG: pol:Bpro_3590 tryptophan 2,3-dioxygenase; TIGRFAM: Tryptophan 2,3-dioxygenase, bacteria; PFAM: Tryptophan 2,3-dioxygenase
YP_004233656.1	TIGRFAM: Kynureninase; KEGG: ctt:CtCNB1_3652 kynureninase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004233657.1	TIGRFAM: Arylformamidase; KEGG: dia:Dtpsy_2438 arylformamidase; PFAM: Putative cyclase
YP_004233658.1	KEGG: dia:Dtpsy_2437 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004233659.1	KEGG: dia:Dtpsy_2436 protein of unknown function UPF0153; manually curated; PFAM: Uncharacterised protein family UPF0153
YP_004233660.1	KEGG: dac:Daci_2175 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit
YP_004233661.1	KEGG: dia:Dtpsy_2434 ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; PFAM: Ferrous iron transport protein B, N-terminal; Ferrous iron transport protein B, C-terminal; Nucleoside recognition
YP_004233662.1	KEGG: dac:Daci_2177 hypothetical protein
YP_004233663.1	KEGG: dac:Daci_3849 hypothetical protein
YP_004233664.1	KEGG: amr:AM1_2482 hypothetical protein
YP_004233665.1	TIGRFAM: Ornithine carbamoyltransferase; KEGG: pol:Bpro_3573 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
YP_004233666.1	TIGRFAM: Acetylornithine/succinylornithine aminotransferase; KEGG: vap:Vapar_1452 acetylornithine aminotransferase; PFAM: Aminotransferase class-III
YP_004233667.1	PFAM: Protein of unknown function DUF3579; KEGG: dia:Dtpsy_2428 hypothetical protein
YP_004233668.1	TIGRFAM: Malate:quinone-oxidoreductase; KEGG: ctt:CtCNB1_3636 malate--quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase
YP_004233669.1	TIGRFAM: Ribosomal protein S20; HAMAP: Ribosomal protein S20; KEGG: vap:Vapar_1454 30S ribosomal protein S20; PFAM: Ribosomal protein S20
YP_004233670.1	KEGG: ajs:Ajs_2999 integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN
YP_004233671.1	PFAM: Transglutaminase-like; KEGG: vap:Vapar_1456 transglutaminase domain protein
YP_004233672.1	TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, YqcD; KEGG: ajs:Ajs_3294 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004233673.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dia:Dtpsy_2646 procollagen-proline dioxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit
YP_004233674.1	PFAM: Uncharacterised protein family UPF0246; KEGG: dia:Dtpsy_2644 hypothetical protein
YP_004233675.1	TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: ajs:Ajs_3290 ribonuclease E; SMART: RNA-binding domain, S1
YP_004233676.1	KEGG: gem:GM21_3461 hypothetical protein
YP_004233677.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dia:Dtpsy_2642 pseudouridine synthase, RluA family; SMART: RNA-binding S4
YP_004233678.1	KEGG: dia:Dtpsy_2641 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004233679.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dac:Daci_5279 Rieske (2Fe-2S) domain-containing protein
YP_004233680.1	PFAM: Peptidase S49; KEGG: dia:Dtpsy_2639 peptidase S49
YP_004233681.1	PFAM: Tetrapyrrole methylase; KEGG: dac:Daci_5277 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase
YP_004233682.1	KEGG: dia:Dtpsy_2637 maf protein; TIGRFAM: Maf-like protein; PFAM: Maf-like protein
YP_004233683.1	PFAM: Protein of unknown function DUF177; KEGG: dia:Dtpsy_2636 protein of unknown function DUF177
YP_004233684.1	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: dac:Daci_5274 50S ribosomal protein L32; PFAM: Ribosomal protein L32p
YP_004233685.1	KEGG: dia:Dtpsy_2634 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: Phospholipid biosynthesis protein, PlsX-like; PFAM: Fatty acid synthesis PlsX protein
YP_004233686.1	TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: dia:Dtpsy_2633 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
YP_004233687.1	TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: ajs:Ajs_3279 [acyl-carrier-protein] S-malonyltransferase; PFAM: Acyl transferase
YP_004233688.1	KEGG: dac:Daci_5270 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004233689.1	SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Acyl carrier protein (ACP); KEGG: ctt:CtCNB1_0973 acyl carrier protein; HAMAP: Acyl carrier protein (ACP); PFAM: Phosphopantetheine-binding
YP_004233690.1	TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: dia:Dtpsy_2629 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004233691.1	KEGG: dia:Dtpsy_2628 hypothetical protein
YP_004233692.1	KEGG: vei:Veis_3246 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70 RpoE type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004233693.1	PFAM: Anti sigma-E protein RseA, N-terminal; KEGG: dia:Dtpsy_2626 anti sigma-E protein, RseA
YP_004233694.1	PFAM: MucB/RseB; KEGG: ajs:Ajs_3272 sigma E regulatory protein, MucB/RseB
YP_004233695.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dia:Dtpsy_2624 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004233696.1	TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; GTP-binding protein LepA, C-terminal; Translation elongation factor EFG/EF2, C-terminal; KEGG: dia:Dtpsy_2623 GTP-binding protein LepA; SMART: Translation elongation factor EFG/EF2, C-terminal
YP_004233697.1	KEGG: ajs:Ajs_3269 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region
YP_004233698.1	KEGG: dia:Dtpsy_2621 putative transmembrane protein
YP_004233699.1	KEGG: ajs:Ajs_3267 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; HAMAP: Ribonuclease III, bacterial; SMART: Ribonuclease III; Double-stranded RNA-binding
YP_004233700.1	KEGG: dia:Dtpsy_2619 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2
YP_004233701.1	KEGG: ajs:Ajs_3265 DNA repair protein RecO; TIGRFAM: Recombination protein O, RecO; PFAM: DNA replication/recombination mediator RecO, N-terminal; Recombination protein O, RecO
YP_004233702.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; KEGG: dac:Daci_5258 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ
YP_004233703.1	KEGG: dia:Dtpsy_2615 4'-phosphopantetheinyl transferase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase
YP_004233704.1	PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: dia:Dtpsy_2614 beta-N-acetylhexosaminidase
YP_004233705.1	PFAM: Protein of unknown function DUF3300; KEGG: dac:Daci_2486 hypothetical protein
YP_004233706.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dia:Dtpsy_2605 small-conductance mechanosensitive channel-like protein
YP_004233707.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; KEGG: dia:Dtpsy_2604 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain
YP_004233708.1	TIGRFAM: Lysyl-tRNA synthetase, class II; KEGG: ajs:Ajs_3250 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004233709.1	KEGG: ajs:Ajs_3249 hypothetical protein
YP_004233710.1	KEGG: ajs:Ajs_3248 putative glycosyltransferase
YP_004233711.1	PFAM: Glycosyl transferase, group 1; KEGG: dia:Dtpsy_2600 glycosyl transferase group 1
YP_004233712.1	KEGG: ajs:Ajs_3246 hypothetical protein
YP_004233713.1	KEGG: dia:Dtpsy_2598 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase
YP_004233714.1	PFAM: Glycosyl transferase, group 1; KEGG: dia:Dtpsy_2597 glycosyl transferase group 1
YP_004233715.1	PFAM: Peptidase S16, lon N-terminal; KEGG: xtr:100498456 hypothetical protein LOC100498456
YP_004233716.1	PFAM: Uncharacterised protein family Ycf19; KEGG: dia:Dtpsy_2595 protein of unknown function YGGT
YP_004233717.1	TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; KEGG: dia:Dtpsy_2594 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase
YP_004233718.1	TIGRFAM: Tryptophan synthase, alpha chain; KEGG: xtr:100497565 tryptophan synthase alpha chain-like; PFAM: Tryptophan synthase, alpha chain
YP_004233719.1	TIGRFAM: Tryptophan synthase, beta chain; KEGG: ajs:Ajs_3239 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004233720.1	KEGG: ctt:CtCNB1_1001 N-(5'phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)
YP_004233721.1	KEGG: dia:Dtpsy_2590 tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain
YP_004233722.1	TIGRFAM: Motility protein FimV, N-terminal; Motility protein FimV, C-terminal; KEGG: ajs:Ajs_3236 putative transmembrane protein
YP_004233723.1	SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, proteobacteria; KEGG: ajs:Ajs_3235 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding
YP_004233725.1	KEGG: ajs:Ajs_3234 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004233726.1	TIGRFAM: Isopropylmalate dehydrogenase; KEGG: dia:Dtpsy_2586 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004233727.1	KEGG: ctt:CtCNB1_1006 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004233728.1	PFAM: Entericidin EcnAB; KEGG: dia:Dtpsy_2583 entericidin EcnAB
YP_004233729.1	TIGRFAM: 3-isopropylmalate dehydratase, large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit; KEGG: ajs:Ajs_3229 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004233730.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_2581 transcriptional regulator, LysR family
YP_004233731.1	TIGRFAM: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; KEGG: ajs:Ajs_3219 chaperone protein DnaJ; SMART: Heat shock protein DnaJ, N-terminal
YP_004233732.1	KEGG: ajs:Ajs_3218 molecular chaperone DnaK; TIGRFAM: Chaperone DnaK; PFAM: Heat shock protein 70
YP_004233733.1	manually curated; HAMAP: GrpE nucleotide exchange factor; KEGG: dia:Dtpsy_2570 heat shock protein GrpE; PFAM: GrpE nucleotide exchange factor
YP_004233734.1	TIGRFAM: Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; KEGG: dia:Dtpsy_2569 30S ribosomal protein S6; PFAM: Ribosomal protein S6
YP_004233735.1	PFAM: Primosome PriB/single-strand DNA-binding; KEGG: dac:Daci_5228 putative primosomal replication protein
YP_004233736.1	TIGRFAM: Ribosomal protein S18; HAMAP: Ribosomal protein S18; KEGG: dia:Dtpsy_2567 30S ribosomal protein S18; PFAM: Ribosomal protein S18
YP_004233737.1	KEGG: dia:Dtpsy_2566 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal
YP_004233738.1	TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: dia:Dtpsy_2565 replicative DNA helicase; SMART: ATPase, AAA+ type, core
YP_004233739.1	PFAM: Variant SH3; KEGG: pen:PSEEN2253 hypothetical protein
YP_004233740.1	KEGG: dac:Daci_5224 hypothetical protein
YP_004233741.1	KEGG: dia:Dtpsy_2563 PhoH family protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc
YP_004233742.1	PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: vei:Veis_0988 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
YP_004233743.1	PFAM: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3; KEGG: dia:Dtpsy_2561 protein of unknown function DUF498
YP_004233744.1	KEGG: ajs:Ajs_3207 aminotransferase AlaT; PFAM: Aminotransferase, class I/classII
YP_004233745.1	KEGG: ctt:CtCNB1_1023 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT
YP_004233746.1	TIGRFAM: Threonine synthase; KEGG: dia:Dtpsy_2558 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004233747.1	TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB), conserved domain; KEGG: dia:Dtpsy_2557 molybdopterin-guanine dinucleotide biosynthesis protein B
YP_004233748.1	TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; MoeA, C-terminal, domain IV; Molybdopterin binding; KEGG: ajs:Ajs_3203 molybdenum cofactor synthesis domain-containing protein; SMART: Molybdopterin binding
YP_004233749.1	KEGG: dac:Daci_5215 molybdopterin converting factor, subunit 1; TIGRFAM: Molybdopterin converting factor, subunit 1; PFAM: ThiamineS
YP_004233750.1	TIGRFAM: Dihydrodipicolinate synthase subfamily; KEGG: dac:Daci_5213 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase
YP_004233751.1	KEGG: bbi:BBIF_0572 S-adenosyl-methyltransferase MraW
YP_004233752.1	KEGG: dia:Dtpsy_2554 hypothetical protein
YP_004233753.1	KEGG: dac:Daci_5211 hypothetical protein
YP_004233754.1	KEGG: vap:Vapar_2573 hypothetical protein
YP_004233755.1	PFAM: Molybdopterin biosynthesis MoaE; KEGG: dia:Dtpsy_2551 molybdopterin biosynthesis MoaE protein
YP_004233756.1	TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dia:Dtpsy_2550 ATP-dependent chaperone ClpB; SMART: ATPase, AAA+ type, core
YP_004233757.1	KEGG: ajs:Ajs_3197 hypothetical protein
YP_004233758.1	KEGG: dia:Dtpsy_2547 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004233759.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dia:Dtpsy_2546 GCN5-related N-acetyltransferase
YP_004233760.1	PFAM: Methyltransferase small; KEGG: dia:Dtpsy_2545 methyltransferase small
YP_004233761.1	KEGG: pna:Pnap_2682 hypothetical protein
YP_004233762.1	PFAM: tRNA-dihydrouridine synthase; KEGG: ajs:Ajs_3192 dihydrouridine synthase, DuS
YP_004233763.1	SMART: Phospholipase D/Transphosphatidylase; KEGG: dia:Dtpsy_2543 phospholipase D/transphosphatidylase
YP_004233764.1	KEGG: dia:Dtpsy_0866 hypothetical protein
YP_004233765.1	KEGG: vap:Vapar_3516 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004233766.1	KEGG: dia:Dtpsy_0867 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15
YP_004233767.1	SMART: RNA-binding domain, S1; K Homology; TIGRFAM: Polyribonucleotide nucleotidyltransferase; KEGG: vap:Vapar_3514 polynucleotide phosphorylase/polyadenylase; PFAM: Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 1; Ribosomal protein S1, RNA-binding domain; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup
YP_004233768.1	TIGRFAM: Quinone oxidoreductase putative, PIG3; KEGG: dia:Dtpsy_0869 NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004233769.1	TIGRFAM: Triosephosphate isomerase; KEGG: dia:Dtpsy_0870 triosephosphate isomerase; PFAM: Triosephosphate isomerase
YP_004233770.1	KEGG: dia:Dtpsy_0871 preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit
YP_004233771.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; KEGG: dia:Dtpsy_0872 NADH-ubiquinone/plastoquinone oxidoreductase chain 3
YP_004233772.1	PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; HAMAP: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: dac:Daci_5179 NADH dehydrogenase subunit B
YP_004233773.1	KEGG: dia:Dtpsy_0874 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit
YP_004233774.1	TIGRFAM: NADH dehydrogenase I, subunit D; KEGG: dia:Dtpsy_0875 NADH dehydrogenase subunit D; PFAM: NADH-quinone oxidoreductase, subunit D
YP_004233775.1	TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: xtr:100488237 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit
YP_004233776.1	SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: dia:Dtpsy_0877 NADH-quinone oxidoreductase, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain
YP_004233777.1	SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; TIGRFAM: NADH:ubiquinone oxidoreductase, subunit G; KEGG: dia:Dtpsy_0878 NADH dehydrogenase subunit G; PFAM: Molybdopterin oxidoreductase; Ferredoxin; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
YP_004233778.1	KEGG: dia:Dtpsy_0879 NADH dehydrogenase (quinone); PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
YP_004233779.1	PFAM: 4Fe-4S binding domain; manually curated; KEGG: vei:Veis_2805 NADH dehydrogenase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_004233780.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: dia:Dtpsy_0881 NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004233781.1	KEGG: dia:Dtpsy_0882 NADH-ubiquinone oxidoreductase chain 4L; HAMAP: NADH-ubiquinone oxidoreductase chain 4L/K; PFAM: NADH-ubiquinone oxidoreductase chain 4L/K
YP_004233782.1	TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: dia:Dtpsy_0883 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
YP_004233783.1	TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: dia:Dtpsy_0884 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal
YP_004233784.1	TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: ajs:Ajs_0970 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase
YP_004233785.1	KEGG: dac:Daci_5166 putative transmembrane protein
YP_004233786.1	PFAM: Protein of unknown function DUF1178; KEGG: dia:Dtpsy_0887 protein of unknown function DUF1178
YP_004233787.1	PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: pol:Bpro_3238 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233788.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5164 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233789.1	KEGG: dia:Dtpsy_2467 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004233790.1	PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_2466 extracellular ligand-binding receptor
YP_004233791.1	PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_3119 extracellular ligand-binding receptor
YP_004233792.1	PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2464 inner-membrane translocator
YP_004233793.1	PFAM: ABC transporter permease; KEGG: vei:Veis_4077 inner-membrane translocator
YP_004233794.1	PFAM: Hydroxyneurosporene synthase; KEGG: dia:Dtpsy_2462 secreted hydrolase-like protein
YP_004233795.1	KEGG: ajs:Ajs_3115 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004233796.1	PFAM: Glycosyl transferase, family 2; KEGG: cwo:Cwoe_5052 glycosyl transferase family 2
YP_004233797.1	PFAM: Collagen triple helix repeat; KEGG: bld:BLi00801 hypothetical protein
YP_004233798.1	KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein
YP_004233799.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2460 protein of unknown function DUF214
YP_004233800.1	PFAM: Heat shock protein Hsp20; KEGG: ajs:Ajs_3113 heat shock protein HSP20
YP_004233801.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2458 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004233802.1	TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: ajs:Ajs_3111 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase
YP_004233803.1	KEGG: pna:Pnap_0622 NmrA family protein
YP_004233804.1	PFAM: Helix-turn-helix, HxlR type; KEGG: pna:Pnap_0621 HxlR family transcriptional regulator
YP_004233805.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: pna:Pnap_1156 hypothetical protein
YP_004233806.1	PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: dia:Dtpsy_2756 glycerophosphoryl diester phosphodiesterase
YP_004233807.1	KEGG: tmz:Tmz1t_3528 hypothetical protein
YP_004233808.1	TIGRFAM: DNA mismatch repair protein, N-terminal; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; KEGG: ajs:Ajs_0978 DNA mismatch repair protein MutL; SMART: MutL, C-terminal, dimerisation; ATPase-like, ATP-binding domain
YP_004233809.1	PFAM: SNARE associated Golgi protein; KEGG: dia:Dtpsy_1467 SNARE associated Golgi protein
YP_004233810.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: xcv:XCV1928 alpha/beta fold family hydrolase
YP_004233811.1	KEGG: dia:Dtpsy_0896 17 kDa surface antigen
YP_004233812.1	KEGG: ajs:Ajs_0982 cupin 2 domain-containing protein
YP_004233813.1	KEGG: ajs:Ajs_0983 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Localisation of periplasmic protein complexes; SMART: Cell wall hydrolase/autolysin, catalytic
YP_004233814.1	KEGG: dac:Daci_5126 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria
YP_004233815.1	KEGG: ajs:Ajs_0985 putative iron-sulfur cluster binding protein; TIGRFAM: 4Fe-4S cluster binding; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain
YP_004233816.1	PFAM: Auxin efflux carrier; KEGG: dia:Dtpsy_0901 auxin efflux carrier
YP_004233817.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_1370 transcriptional regulator, LysR family
YP_004233818.1	TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: hwa:HQ1879A aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
YP_004233819.1	PFAM: Protein of unknown function DUF81; KEGG: afw:Anae109_1011 hypothetical protein
YP_004233820.1	KEGG: vei:Veis_1715 hypothetical protein
YP_004233821.1	KEGG: dia:Dtpsy_0903 tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage
YP_004233822.1	KEGG: dac:Daci_5116 hypothetical protein
YP_004233823.1	KEGG: dia:Dtpsy_0905 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004233824.1	KEGG: dia:Dtpsy_0906 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; Metal-dependent hydrolase HDOD; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004233825.1	PFAM: Protein of unknown function DUF455; KEGG: dia:Dtpsy_0907 protein of unknown function DUF455
YP_004233826.1	KEGG: dac:Daci_5112 hexapaptide repeat-containing transferase
YP_004233827.1	PFAM: Heat shock protein Hsp33 protein; KEGG: ajs:Ajs_0994 HSP33 protein
YP_004233828.1	KEGG: pol:Bpro_3186 hypothetical protein
YP_004233829.1	PFAM: Septum formation initiator; KEGG: dia:Dtpsy_0911 septum formation initiator
YP_004233830.1	TIGRFAM: Enolase; KEGG: dia:Dtpsy_0912 phosphopyruvate hydratase; PFAM: Enolase, C-terminal; Enolase, N-terminal
YP_004233831.1	PFAM: Protein of unknown function DUF1330; KEGG: dac:Daci_5107 hypothetical protein
YP_004233832.1	TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; KEGG: vap:Vapar_3444 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA
YP_004233833.1	TIGRFAM: CTP synthase; KEGG: ajs:Ajs_1000 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004233834.1	TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: ajs:Ajs_1001 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein
YP_004233835.1	PFAM: DeoxyUTP pyrophosphatase domain; TIGRFAM: DeoxyUTP pyrophosphatase; HAMAP: DeoxyUTP pyrophosphatase; KEGG: dia:Dtpsy_0917 deoxyuridine 5'-triphosphate nucleotidohydrolase
YP_004233836.1	PFAM: Rickettsia 17kDa surface antigen; KEGG: dia:Dtpsy_0918 17 kDa surface antigen
YP_004233837.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: dia:Dtpsy_0919 fkbp-type peptidyl-prolyl cis-trans isomerase
YP_004233838.1	KEGG: dac:Daci_5092 cupin 4 family protein; PFAM: Cupin, JmjC-type; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase
YP_004233839.1	KEGG: dia:Dtpsy_0921 hypothetical protein
YP_004233840.1	KEGG: dia:Dtpsy_0922 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004233841.1	PFAM: Lipoprotein, NlpB; KEGG: ajs:Ajs_1009 NlpB/DapX family lipoprotein
YP_004233842.1	TIGRFAM: Dihydrodipicolinate synthase subfamily; KEGG: dia:Dtpsy_0924 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase
YP_004233843.1	PFAM: Methyltransferase type 11; KEGG: vei:Veis_1661 methyltransferase type 12
YP_004233844.1	KEGG: vap:Vapar_3430 hypothetical protein
YP_004233845.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ajs:Ajs_1013 major facilitator superfamily transporter
YP_004233846.1	PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: dia:Dtpsy_0928 DNA topoisomerase IV subunit B; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain
YP_004233847.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ajs:Ajs_1015 lytic transglycosylase, catalytic
YP_004233848.1	SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA topoisomerase IV, subunit A, Gram-negative; KEGG: ajs:Ajs_1016 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004233849.1	KEGG: dac:Daci_3834 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233850.1	KEGG: dac:Daci_5082 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233851.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase; KEGG: ctt:CtCNB1_1170 pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004233852.1	PFAM: Endoribonuclease L-PSP; KEGG: dia:Dtpsy_0932 endoribonuclease L-PSP
YP_004233853.1	PFAM: Glutathione-dependent formaldehyde-activating, GFA; KEGG: bpa:BPP3862 hypothetical protein
YP_004233854.1	KEGG: glo:Glov_2176 hypothetical protein
YP_004233855.1	KEGG: pen:PSEEN3415 hypothetical protein
YP_004233856.1	TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: dia:Dtpsy_0933 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like
YP_004233857.1	PFAM: Domain of unknown function DUF404; Domain of unknown function DUF407; KEGG: ajs:Ajs_1020 hypothetical protein
YP_004233858.1	PFAM: Domain of unknown function DUF403; KEGG: vei:Veis_0405 hypothetical protein
YP_004233859.1	KEGG: dia:Dtpsy_0937 hypothetical protein
YP_004233860.1	PFAM: NUDIX hydrolase domain; KEGG: fal:FRAAL4822 hypothetical protein
YP_004233861.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; KEGG: fra:Francci3_4092 adenosylhomocysteinase
YP_004233862.1	KEGG: mxa:MXAN_3926 hypothetical protein
YP_004233863.1	PFAM: Protein of unknown function DUF2132; KEGG: dia:Dtpsy_0938 hypothetical protein
YP_004233864.1	PFAM: Methyltransferase type 11; KEGG: hse:Hsero_1419 SAM-dependent methyltransferase
YP_004233865.1	PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: xac:XAC3625 beta-ketoacyl-[ACP] synthase I; SMART: Polyketide synthase, beta-ketoacyl synthase domain
YP_004233866.1	KEGG: dsa:Desal_0535 putative lipoprotein
YP_004233867.1	PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; KEGG: bam:Bamb_3611 3-oxoacyl-(acyl carrier protein) synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain
YP_004233868.1	TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative; KEGG: bvi:Bcep1808_5966 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004233869.1	KEGG: bgf:BC1003_2650 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
YP_004233870.1	KEGG: rso:RS00773 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal
YP_004233871.1	PFAM: Protein of unknown function DUF3261; KEGG: saz:Sama_3390 hypothetical protein
YP_004233872.1	PFAM: Membrane transport protein, MMPL type; KEGG: bge:BC1002_2270 RND superfamily drug exporter
YP_004233873.1	PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: bph:Bphy_0698 putative signal peptide protein
YP_004233874.1	PFAM: Thioesterase superfamily; KEGG: rso:RS00778 hypothetical protein
YP_004233875.1	PFAM: Glycosyl transferase, family 2; Bacterial lipid A biosynthesis acyltransferase; KEGG: rso:RS00785 hypothetical protein
YP_004233876.1	PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: bxe:Bxe_A0931 putative AMP-dependent synthetase and ligase
YP_004233877.1	PFAM: AMP-dependent synthetase/ligase; KEGG: bph:Bphy_0694 AMP-dependent synthetase and ligase
YP_004233878.1	KEGG: rme:Rmet_4380 hypothetical protein
YP_004233879.1	PFAM: Phosphopantetheine-binding; KEGG: bge:BC1002_2277 phosphopantetheine-binding protein
YP_004233880.1	PFAM: Phosphopantetheine-binding; KEGG: bge:BC1002_2278 putative acyl-carrier protein
YP_004233881.1	KEGG: smt:Smal_3924 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004233882.1	KEGG: bph:Bphy_0689 hypothetical protein
YP_004233883.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: met:M446_4807 4'-phosphopantetheinyl transferase
YP_004233884.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0939 transcriptional regulator, LysR family
YP_004233885.1	KEGG: dia:Dtpsy_0940 alpha/beta hydrolase fold-3 domain protein
YP_004233886.1	KEGG: dia:Dtpsy_0941 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004233887.1	KEGG: dia:Dtpsy_0942 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004233888.1	KEGG: dia:Dtpsy_0943 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004233889.1	KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004233890.1	KEGG: ank:AnaeK_2314 hypothetical protein
YP_004233891.1	KEGG: dia:Dtpsy_0945 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004233892.1	PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dia:Dtpsy_0947 hypothetical protein
YP_004233893.1	PFAM: Protein of unknown function DUF3325; KEGG: dia:Dtpsy_0948 hypothetical protein
YP_004233894.1	PFAM: PepSY-associated TM helix; KEGG: ctt:CtCNB1_1604 PepSY-associated TM helix
YP_004233895.1	PFAM: Protein of unknown function DUF3649; KEGG: dia:Dtpsy_0950 putative iron uptake protein
YP_004233896.1	KEGG: ajs:Ajs_1028 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004233897.1	KEGG: dia:Dtpsy_2370 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004233898.1	TIGRFAM: Peroxiredoxin; KEGG: ctt:CtCNB1_1176 alkyl hydroperoxide reductase/thiol specific; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal
YP_004233899.1	TIGRFAM: Alkyl hydroperoxide reductase, subunit F; KEGG: ctt:CtCNB1_1177 FAD-dependent pyridine nucleotide-disulphide; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004233900.1	KEGG: dac:Daci_5069 hypothetical protein
YP_004233901.1	KEGG: dac:Daci_3853 hypothetical protein
YP_004233902.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004233903.1	PFAM: Restriction endonuclease, type IV-like, Mrr; DNA topoisomerase, type IA, zn finger; KEGG: dac:Daci_3899 restriction endonuclease
YP_004233904.1	KEGG: gau:GAU_3459 hypothetical protein
YP_004233905.1	PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; KEGG: dia:Dtpsy_2367 hypothetical protein
YP_004233906.1	TIGRFAM: Phosphoenolpyruvate synthase; KEGG: vap:Vapar_1816 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme; PEP-utilising enzyme, mobile domain
YP_004233907.1	TIGRFAM: Sodium symporter small subunit, predicted; KEGG: dac:Daci_5063 hypothetical protein
YP_004233908.1	KEGG: dia:Dtpsy_2364 calcium-binding EF-hand-containing protein; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; PFAM: Sodium/solute symporter
YP_004233909.1	KEGG: ajs:Ajs_2876 hypothetical protein
YP_004233910.1	TIGRFAM: Conserved hypothetical protein CHP03118; KEGG: bph:Bphy_5305 hypothetical protein
YP_004233911.1	KEGG: dia:Dtpsy_2493 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004233912.1	KEGG: dia:Dtpsy_2492 putative transcriptional regulator
YP_004233913.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_3144 LysR family transcriptional regulator
YP_004233914.1	KEGG: dia:Dtpsy_2490 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004233915.1	KEGG: dia:Dtpsy_2489 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004233916.1	KEGG: dia:Dtpsy_2488 hypothetical protein
YP_004233917.1	PFAM: Drug/metabolite transporter; KEGG: rsc:RCFBP_10755 putative multidrug resistance efflux transporter
YP_004233918.1	PFAM: Uncharacterised protein family VirK; KEGG: xac:XAC0435 VirK protein
YP_004233919.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: dac:Daci_3343 LysR family transcriptional regulator
YP_004233920.1	PFAM: Dihydrodipicolinate synthetase; KEGG: vap:Vapar_5676 dihydrodipicolinate synthetase
YP_004233921.1	KEGG: vap:Vapar_5677 hypothetical protein
YP_004233922.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dac:Daci_3340 short-chain dehydrogenase/reductase SDR
YP_004233923.1	KEGG: dac:Daci_3339 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004233924.1	KEGG: npu:Npun_F5446 hypothetical protein
YP_004233925.1	PFAM: Protein of unknown function DUF955; KEGG: pst:PSPTO_4250 DNA-binding protein
YP_004233926.1	KEGG: lch:Lcho_1314 hypothetical protein
YP_004233927.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: dia:Dtpsy_2486 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal
YP_004233928.1	KEGG: dac:Daci_3317 hypothetical protein
YP_004233929.1	KEGG: dac:Daci_3903 hypothetical protein
YP_004233930.1	KEGG: dac:Daci_3903 hypothetical protein
YP_004233931.1	KEGG: dac:Daci_3903 hypothetical protein
YP_004233932.1	KEGG: hse:Hsero_4538 methyl-accepting chemotaxis transducer transmembrane protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004233933.1	TIGRFAM: PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related; KEGG: pen:PSEEN2918 quinate dehydrogenase (pyrroloquinoline-quinone); PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat
YP_004233934.1	KEGG: dia:Dtpsy_2485 RNA polymerase, sigma 70 subunit, RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, non-essential domain; RNA polymerase sigma-70 region 3; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2
YP_004233935.1	TIGRFAM: DNA primase, DnaG; KEGG: ajs:Ajs_3137 DNA primase
YP_004233936.1	KEGG: ajs:Ajs_3442 diguanylate phosphodiesterase; PFAM: Diguanylate phosphodiesterase, EAL domain; SMART: Diguanylate phosphodiesterase, EAL domain
YP_004233937.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: vap:Vapar_1883 TRAP dicarboxylate transporter, DctP subunit
YP_004233938.1	KEGG: ajs:Ajs_1042 gamma-glutamyltransferase 1; PFAM: Gamma-glutamyltranspeptidase
YP_004233939.1	KEGG: dia:Dtpsy_1077 alkaline phosphatase; PFAM: Alkaline phosphatase D-related
YP_004233940.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ajs:Ajs_1158 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004233941.1	KEGG: dac:Daci_5030 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004233942.1	TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; KEGG: dia:Dtpsy_1080 stationary phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase
YP_004233943.1	TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: dia:Dtpsy_1081 protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004233944.1	KEGG: dia:Dtpsy_1082 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004233945.1	TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: dac:Daci_5026 RluA family pseudouridine synthase; SMART: RNA-binding S4
YP_004233946.1	KEGG: dac:Daci_5025 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote
YP_004233947.1	TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: vei:Veis_0085 pseudouridine synthase; SMART: RNA-binding S4
YP_004233948.1	SMART: Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; KEGG: ajs:Ajs_1166 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase
YP_004233949.1	KEGG: dia:Dtpsy_1087 radical SAM enzyme, Cfr family; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM
YP_004233950.1	KEGG: dia:Dtpsy_1088 type IV pilus biogenesis/stability protein PilW; TIGRFAM: Pilus biogenesis/stability type IV, PilW; PFAM: Tetratricopeptide TPR2
YP_004233951.1	KEGG: ajs:Ajs_1169 hypothetical protein
YP_004233952.1	TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; KEGG: dia:Dtpsy_1090 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
YP_004233953.1	TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: pna:Pnap_1873 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding
YP_004233954.1	PFAM: Protein of unknown function DUF2133; KEGG: dia:Dtpsy_1092 hypothetical protein
YP_004233955.1	KEGG: dia:Dtpsy_1093 outer membrane assembly lipoprotein YfgL; TIGRFAM: Outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat
YP_004233956.1	KEGG: dac:Daci_5015 GTP-binding protein EngA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related
YP_004233957.1	TIGRFAM: Host factor Hfq; HAMAP: Host factor Hfq; KEGG: vei:Veis_0075 RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein (LSM) domain
YP_004233958.1	KEGG: ajs:Ajs_1176 small GTP-binding protein; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related
YP_004233959.1	SMART: Band 7 protein; manually curated; KEGG: dia:Dtpsy_1097 HflK protein; TIGRFAM: HflK; PFAM: Band 7 protein
YP_004233960.1	TIGRFAM: HflC; PFAM: Band 7 protein; KEGG: dia:Dtpsy_1098 HflC protein; SMART: Band 7 protein
YP_004233961.1	TIGRFAM: Histidyl-tRNA synthetase, class IIa, putative; KEGG: vei:Veis_3163 tRNA synthetase, class II (G, H, P and S)
YP_004233962.1	PFAM: Adenylosuccinate synthetase; KEGG: dac:Daci_5009 adenylosuccinate synthetase; SMART: Adenylosuccinate synthetase
YP_004233963.1	PFAM: Phosphoribosyltransferase; KEGG: ajs:Ajs_1182 phosphoribosyltransferase
YP_004233964.1	KEGG: ajs:Ajs_1183 ribosomal small subunit pseudouridine synthase A; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004233965.1	PFAM: Selenium-binding protein; KEGG: dia:Dtpsy_1104 hypothetical protein
YP_004233966.1	PFAM: Polysaccharide deacetylase; KEGG: pna:Pnap_2784 polysaccharide deacetylase
YP_004233967.1	PFAM: Fatty acid hydroxylase; KEGG: dia:Dtpsy_1106 fatty acid hydroxylase
YP_004233968.1	KEGG: dia:Dtpsy_1107 putative transmembrane protein
YP_004233969.1	KEGG: ajs:Ajs_1188 molybdopterin binding domain-containing protein; PFAM: Molybdopterin binding; SMART: Molybdopterin binding
YP_004233970.1	KEGG: vei:Veis_3154 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp
YP_004233971.1	KEGG: ajs:Ajs_1190 putative signal peptide protein
YP_004233972.1	KEGG: dia:Dtpsy_1111 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004233973.1	TIGRFAM: Signal transduction response regulator, nitrogen regulation NR(I); PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; KEGG: vei:Veis_3151 nitrogen metabolism transcriptional regulator, NtrC, fis family; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004233974.1	KEGG: dia:Dtpsy_1113 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function DUF2383
YP_004233975.1	TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth; KEGG: dia:Dtpsy_1114 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase
YP_004233976.1	KEGG: dac:Daci_4971 dihydrofolate reductase; PFAM: Dihydrofolate reductase domain
YP_004233977.1	KEGG: pna:Pnap_2775 putative transmembrane protein
YP_004233978.1	TIGRFAM: Thymidylate synthase; KEGG: vap:Vapar_1664 thymidylate synthase; PFAM: Thymidylate synthase
YP_004233979.1	manually curated; KEGG: dac:Daci_4969 hypothetical protein
YP_004233980.1	KEGG: dia:Dtpsy_1117 FAD linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004233981.1	PFAM: Protein of unknown function DUF2069, membrane; KEGG: dia:Dtpsy_1118 membrane protein-like protein
YP_004233982.1	KEGG: dia:Dtpsy_1119 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related
YP_004233983.1	KEGG: ajs:Ajs_1201 amine oxidase; TIGRFAM: Squalene-associated FAD-dependent desaturase; PFAM: Amine oxidase
YP_004233984.1	TIGRFAM: Squalene/phytoene synthase HpnD; KEGG: dia:Dtpsy_1121 squalene synthase HpnD; PFAM: Squalene/phytoene synthase
YP_004233985.1	SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: dac:Daci_2647 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core
YP_004233986.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Clp protease, ATP-binding subunit ClpX; KEGG: dia:Dtpsy_1129 ATP-dependent protease ATP-binding subunit ClpX; HAMAP: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal
YP_004233987.1	PFAM: Peptidase S14, ClpP; TIGRFAM: Peptidase S14, ClpP; HAMAP: Peptidase S14, ClpP; KEGG: dia:Dtpsy_1128 ATP-dependent Clp protease proteolytic subunit
YP_004233988.1	KEGG: dia:Dtpsy_1127 trigger factor; TIGRFAM: Trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Trigger factor, C-terminal, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004233989.1	PFAM: Acriflavin resistance protein; KEGG: pna:Pnap_2959 acriflavin resistance protein
YP_004233990.1	KEGG: dia:Dtpsy_1125 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004233991.1	KEGG: dia:Dtpsy_1124 squalene synthase HpnC; TIGRFAM: Squalene synthase HpnC; PFAM: Squalene/phytoene synthase
YP_004233992.1	KEGG: swi:Swit_4694 chromosome segregation protein SMC
YP_004233993.1	PFAM: Virulence factor, secretion apparatus; KEGG: dac:Daci_3837 hypothetical protein
YP_004233994.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: dac:Daci_3838 serine/threonine protein kinase
YP_004233995.1	KEGG: dac:Daci_3840 TPR repeat-containing protein
YP_004233996.1	KEGG: dac:Daci_3841 FHA domain-containing protein; TIGRFAM: Type VI secretion system, FHA domain-containing; PFAM: Forkhead-associated (FHA) domain
YP_004233997.1	KEGG: dac:Daci_3842 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like
YP_004233998.1	TIGRFAM: Type VI secretion system, lipoprotein VCA0113; KEGG: dac:Daci_3843 putative lipoprotein
YP_004233999.1	KEGG: dac:Daci_3844 type VI secretion protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876
YP_004234000.1	KEGG: dac:Daci_3845 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; Type VI secretion system, OmpA/MotB; PFAM: Type IV / VI secretion system, DotU; Outer membrane protein, OmpA/MotB, C-terminal
YP_004234001.1	KEGG: dac:Daci_3846 type VI secretion protein IcmF; TIGRFAM: Type VI secretion system, IcmF; PFAM: ImcF-related; Domain of unknown function DUF1215
YP_004234002.1	KEGG: dac:Daci_3847 hypothetical protein; TIGRFAM: Type VI secretion system-associated, BMAA0400; PFAM: Type VI secretion system-associated, BMAA0400
YP_004234003.1	KEGG: dac:Daci_3848 ImpA family type VI secretion-associated protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal
YP_004234004.1	KEGG: dac:Daci_3850 type VI secretion protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301
YP_004234005.1	KEGG: dac:Daci_3851 EvpB family type VI secretion protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877
YP_004234006.1	PFAM: virulence protein, SciE type; KEGG: dac:Daci_3856 virulence protein SciE type
YP_004234007.1	KEGG: dac:Daci_3858 type VI secretion system lysozyme-related protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25
YP_004234008.1	KEGG: dac:Daci_3859 type VI secretion protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110
YP_004234009.1	KEGG: dac:Daci_3860 type VI secretion protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305
YP_004234010.1	TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dac:Daci_3864 type VI secretion ATPase; SMART: ATPase, AAA+ type, core
YP_004234011.1	PFAM: Protein of unknown function DUF45; KEGG: dia:Dtpsy_2355 protein of unknown function DUF45
YP_004234012.1	KEGG: dac:Daci_3816 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004234013.1	KEGG: dac:Daci_3817 molybdopterin dehydrogenase FAD-binding; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal
YP_004234014.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_3818 2Fe-2S iron-sulfur cluster binding domain-containing protein
YP_004234015.1	PFAM: Asp/Glu/hydantoin racemase; TIGRFAM: Glutamate racemase; HAMAP: Glutamate racemase; KEGG: vei:Veis_3213 glutamate racemase
YP_004234016.1	TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; KEGG: dac:Daci_2654 tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit; PFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain
YP_004234017.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; MHYT; KEGG: ctt:CtCNB1_1381 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted
YP_004234018.1	TIGRFAM: Fumarate hydratase, class II; KEGG: vap:Vapar_2522 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal
YP_004234019.1	KEGG: vap:Vapar_1320 putative DNA topoisomerase, type I; PFAM: DNA topoisomerase I, catalytic core, eukaryotic-type
YP_004234020.1	KEGG: ajs:Ajs_1059 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004234021.1	KEGG: ajs:Ajs_1060 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234022.1	PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: dia:Dtpsy_0979 glycine betaine transporter periplasmic subunit
YP_004234023.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_2520 binding-protein-dependent transport systems inner membrane component
YP_004234024.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; KEGG: dac:Daci_2668 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core
YP_004234025.1	KEGG: ajs:Ajs_1066 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0114, bacteria; PFAM: Uncharacterised protein family UPF0114
YP_004234026.1	KEGG: dwi:Dwil_GK16248 GK16248 gene product from transcript GK16248-RA
YP_004234027.1	TIGRFAM: Acetate-CoA ligase; KEGG: dia:Dtpsy_0983 acetate/CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004234028.1	KEGG: vei:Veis_3219 hypothetical protein
YP_004234029.1	PFAM: Cytochrome c, class I; KEGG: dac:Daci_2749 cytochrome c class I
YP_004234030.1	KEGG: dia:Dtpsy_0986 hypothetical protein
YP_004234031.1	TIGRFAM: Dihydroxy-acid dehydratase; KEGG: reu:Reut_A2432 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004234032.1	KEGG: ctt:CtCNB1_3371 bacterioferritin; TIGRFAM: Bacterioferritin; PFAM: Ferritin/Dps protein
YP_004234033.1	KEGG: plm:Plim_3920 hypothetical protein
YP_004234034.1	KEGG: son:SO_1027 hypothetical protein
YP_004234035.1	KEGG: dac:Daci_2763 prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase
YP_004234036.1	KEGG: vei:Veis_2755 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004234037.1	KEGG: ajs:Ajs_1077 malonyl-CoA decarboxylase; PFAM: Malonyl-CoA decarboxylase
YP_004234038.1	KEGG: dia:Dtpsy_0994 hypothetical protein
YP_004234039.1	PFAM: Crotonase, core; KEGG: ajs:Ajs_1079 enoyl-CoA hydratase/isomerase
YP_004234040.1	KEGG: dia:Dtpsy_0996 malonyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase
YP_004234041.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bpt:Bpet2728 LysR family transcriptional regulator
YP_004234042.1	PFAM: Amidohydrolase 1; KEGG: reu:Reut_A0890 amidohydrolase
YP_004234043.1	PFAM: Extracellular ligand-binding receptor; KEGG: azc:AZC_3000 ABC transport solute-binding protein
YP_004234044.1	PFAM: ABC transporter permease; KEGG: bbr:BB1504 ABC transporter permease
YP_004234045.1	PFAM: ABC transporter permease; KEGG: mno:Mnod_1546 inner-membrane translocator
YP_004234046.1	PFAM: ABC transporter-like; KEGG: rru:Rru_A3414 ABC transporter component; SMART: ATPase, AAA+ type, core
YP_004234047.1	PFAM: ABC transporter-like; KEGG: mno:Mnod_1544 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234048.1	PFAM: UspA; KEGG: vei:Veis_1173 UspA domain-containing protein
YP_004234049.1	TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: dia:Dtpsy_0998 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase
YP_004234050.1	KEGG: dia:Dtpsy_0999 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type
YP_004234051.1	TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; KEGG: dia:Dtpsy_1000 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_004234052.1	KEGG: dia:Dtpsy_1001 cbb3-type cytochrome c oxidase subunit II; TIGRFAM: Cytochrome c oxidase, monohaem subunit/FixO; PFAM: Cytochrome c oxidase, monohaem subunit/FixO
YP_004234053.1	KEGG: dia:Dtpsy_1002 Cbb3-type cytochrome oxidase component
YP_004234054.1	KEGG: ajs:Ajs_1087 cytochrome c oxidase, cbb3-type, subunit III; TIGRFAM: Cytochrome c oxidase cbb3-type, subunit III; PFAM: Cytochrome c, class I
YP_004234055.1	TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; KEGG: ajs:Ajs_1088 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004234056.1	PFAM: FixH; KEGG: dia:Dtpsy_1005 hypothetical protein
YP_004234057.1	KEGG: dia:Dtpsy_1006 hypothetical protein
YP_004234058.1	KEGG: dia:Dtpsy_1007 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp
YP_004234059.1	TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; PFAM: HemN, C-terminal; Radical SAM; KEGG: dia:Dtpsy_1008 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004234060.1	KEGG: dac:Daci_2784 hypothetical protein
YP_004234061.1	KEGG: dac:Daci_2785 metal dependent phosphohydrolase; PFAM: Protein of unknown function DUF3391; Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004234062.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: dac:Daci_2786 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004234063.1	PFAM: Cell division protein ZapA-like; KEGG: dia:Dtpsy_1010 protein of unknown function DUF710
YP_004234064.1	KEGG: vap:Vapar_2546 hypothetical protein
YP_004234065.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: pna:Pnap_2368 TonB-dependent receptor, plug
YP_004234066.1	PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase; KEGG: dia:Dtpsy_1013 CobB/CobQ domain protein glutamine amidotransferase
YP_004234067.1	KEGG: ajs:Ajs_1098 adenosylcobinamide kinase; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase
YP_004234068.1	PFAM: Periplasmic binding protein; KEGG: ajs:Ajs_1099 periplasmic binding protein
YP_004234069.1	PFAM: ABC transporter permease protein; KEGG: dia:Dtpsy_1016 transport system permease protein
YP_004234070.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1017 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234071.1	TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR; KEGG: vap:Vapar_2553 cob(I)alamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR
YP_004234072.1	KEGG: vap:Vapar_2554 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like
YP_004234073.1	KEGG: dia:Dtpsy_2533 cobalamin biosynthesis protein CobD; TIGRFAM: Cobalamin biosynthesis CobD/CbiB; PFAM: Cobalamin biosynthesis CobD/CbiB
YP_004234074.1	PFAM: Aminotransferase, class I/classII; KEGG: ajs:Ajs_3179 aminotransferase
YP_004234075.1	KEGG: dia:Dtpsy_2531 hypothetical protein
YP_004234076.1	PFAM: Protein of unknown function DUF3037; KEGG: dia:Dtpsy_2530 hypothetical protein
YP_004234077.1	KEGG: hse:Hsero_2475 short-chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234078.1	KEGG: dia:Dtpsy_2529 cobyric acid synthase CobQ; TIGRFAM: Cobyric acid synthase CobQ; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase
YP_004234079.1	TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; KEGG: ajs:Ajs_3176 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like
YP_004234080.1	KEGG: hse:Hsero_0788 hypothetical protein
YP_004234081.1	KEGG: nfa:nfa43780 hypothetical protein
YP_004234082.1	PFAM: ABC transporter-like; KEGG: vei:Veis_2473 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234083.1	KEGG: pol:Bpro_1010 twin-arginine translocation pathway signal
YP_004234084.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_3270 binding-protein-dependent transport systems inner membrane component
YP_004234085.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_3271 binding-protein-dependent transport systems inner membrane component
YP_004234086.1	KEGG: vei:Veis_2469 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal
YP_004234087.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: pol:Bpro_1006 Asp/Glu racemase
YP_004234088.1	KEGG: ang:An12g00790 hypothetical protein
YP_004234089.1	KEGG: vap:Vapar_1330 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: Citrate-proton symport; PFAM: Major facilitator superfamily MFS-1
YP_004234090.1	PFAM: Heat shock protein DnaJ-like protein DjlA; KEGG: azo:azo2690 hypothetical protein
YP_004234091.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: bbr:BB2408 putative acetyltransferase
YP_004234092.1	SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; Helix-hairpin-helix DNA-binding motif, class 1; TIGRFAM: Endonuclease III/Nth; KEGG: dac:Daci_2824 endonuclease III; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004234093.1	KEGG: ajs:Ajs_3169 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/classII
YP_004234094.1	PFAM: SlyX; KEGG: dia:Dtpsy_2515 SlyX family protein
YP_004234095.1	PFAM: NADP-dependent oxidoreductase domain; KEGG: ajs:Ajs_3167 aldo/keto reductase
YP_004234096.1	KEGG: vap:Vapar_2574 hypothetical protein
YP_004234097.1	KEGG: vap:Vapar_0322 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004234098.1	KEGG: lch:Lcho_3549 translation initiation factor SUI1; TIGRFAM: Archaeal/bacterial translation initiation factor SUI1; PFAM: Translation initiation factor SUI1
YP_004234099.1	KEGG: dar:Daro_1138 hypothetical protein
YP_004234100.1	KEGG: bch:Bcen2424_1849 globin
YP_004234101.1	KEGG: dia:Dtpsy_2511 hemerythrin HHE cation binding domain protein; TIGRFAM: Iron-sulfur cluster repair di-iron protein; PFAM: Domain of unknown function DUF542, ScdA N-terminal; Haemerythrin/HHE cation-binding motif
YP_004234102.1	KEGG: ajs:Ajs_3163 BadM/Rrf2 family transcriptional regulator; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2
YP_004234103.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: mrd:Mrad2831_6221 gluconolactonase
YP_004234104.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: acr:Acry_3128 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004234105.1	PFAM: Cupin 2, conserved barrel; KEGG: acr:Acry_3129 hypothetical protein
YP_004234106.1	PFAM: Uncharacterised protein family YphA; KEGG: acr:Acry_3130 DoxX family protein
YP_004234107.1	PFAM: Glucose-methanol-choline oxidoreductase, C-terminal; Glucose-methanol-choline oxidoreductase, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; KEGG: acr:Acry_3135 glucose-methanol-choline oxidoreductase
YP_004234108.1	manually curated; TIGRFAM: Transcription regulator ArgP; KEGG: dia:Dtpsy_2509 chromosome replication initiation inhibitor protein; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding
YP_004234109.1	KEGG: dia:Dtpsy_2508 lysine exporter protein (LysE/YggA); manually curated; PFAM: Lysine exporter protein (LYSE/YGGA)
YP_004234110.1	KEGG: dia:Dtpsy_2507 lipoprotein, YaeC family; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004234111.1	TIGRFAM: Phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: dia:Dtpsy_2506 phosphoserine phosphatase SerB; PFAM: Haloacid dehalogenase-like hydrolase
YP_004234112.1	KEGG: bmj:BMULJ_01901 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004234113.1	PFAM: Tannase/feruloyl esterase; KEGG: vap:Vapar_1752 tannase and feruloyl esterase
YP_004234114.1	KEGG: dia:Dtpsy_2505 hypothetical protein
YP_004234115.1	TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription-repair-coupling factor domain; Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: ajs:Ajs_3157 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004234116.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: ajs:Ajs_3156 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase
YP_004234117.1	TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: dia:Dtpsy_2502 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
YP_004234118.1	KEGG: dia:Dtpsy_2501 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234119.1	KEGG: dia:Dtpsy_2500 osmolarity response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004234120.1	PFAM: Protein of unknown function DUF541; KEGG: ajs:Ajs_3152 hypothetical protein
YP_004234121.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; KEGG: ctt:CtCNB1_1975 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234122.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_2855 alpha/beta hydrolase fold
YP_004234123.1	SMART: RelA/SpoT; TIGRFAM: RelA/SpoT protein; KEGG: ajs:Ajs_3149 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT
YP_004234124.1	KEGG: pna:Pnap_4836 hypothetical protein
YP_004234125.1	KEGG: hje:HacjB3_09000 alcohol dehydrogenase zinc-binding domain protein
YP_004234126.1	KEGG: rpc:RPC_1554 hypothetical protein
YP_004234127.1	KEGG: dac:Daci_4877 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004234128.1	KEGG: amr:AM1_E0108 hypothetical protein
YP_004234129.1	KEGG: dac:Daci_3553 hypothetical protein
YP_004234130.1	PFAM: Peroxiredoxin, OsmC-like protein; KEGG: rfr:Rfer_3388 OsmC-like protein
YP_004234131.1	KEGG: ank:AnaeK_3161 outer membrane adhesin-like protein
YP_004234132.1	KEGG: ctt:CtCNB1_2612 hypothetical protein
YP_004234133.1	KEGG: mcc:713241 cadherin 24, type 2
YP_004234134.1	KEGG: bph:Bphy_5298 PfpI family intracellular peptidase; TIGRFAM: Peptidase C56, PfpI; PFAM: ThiJ/PfpI
YP_004234135.1	KEGG: pol:Bpro_1344 hypothetical protein
YP_004234136.1	KEGG: dia:Dtpsy_2495 polyhydroxyalkonate synthesis repressor, PhaR; TIGRFAM: Polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding, N-terminal; PHB accumulation regulatory
YP_004234137.1	KEGG: rsl:RPSI07_1883 conserved hypothethical protein
YP_004234138.1	KEGG: pna:Pnap_2067 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004234139.1	PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; KEGG: pna:Pnap_2068 altronate dehydratase; SMART: SAF domain
YP_004234140.1	PFAM: Rhamnose mutarotase; KEGG: sit:TM1040_3394 hypothetical protein
YP_004234141.1	KEGG: pna:Pnap_2069 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal
YP_004234142.1	KEGG: pna:Pnap_2070 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal
YP_004234143.1	PFAM: Amidohydrolase 2; KEGG: bcm:Bcenmc03_6311 amidohydrolase 2
YP_004234144.1	KEGG: bgl:bglu_2g18500 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain
YP_004234145.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: atu:Atu2817 ABC transporter, substrate binding protein (ribose)
YP_004234146.1	PFAM: ABC transporter permease; KEGG: azl:AZL_a06340 ribose transport system permease protein
YP_004234147.1	PFAM: ABC transporter-like; KEGG: azl:AZL_a06330 ribose transport system ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004234148.1	KEGG: vap:Vapar_5316 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004234149.1	PFAM: 2-keto-3-deoxygluconate permease; manually curated; TIGRFAM: 2-keto-3-deoxygluconate permease, subgroup; KEGG: dda:Dd703_1707 2-keto-3-deoxygluconate permease; HAMAP: 2-keto-3-deoxygluconate permease
YP_004234150.1	KEGG: bge:BC1002_5167 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234151.1	KEGG: bgf:BC1003_4655 ureidoglycolate lyase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004234152.1	KEGG: hse:Hsero_1045 transcription regulator protein; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004234153.1	PFAM: Protein of unknown function DUF2267; KEGG: azl:AZL_d04560 hypothetical protein
YP_004234154.1	PFAM: Protein of unknown function DUF1905; KEGG: cmi:CMM_0156 hypothetical protein
YP_004234155.1	TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; PFAM: Radical SAM; Methylthiotransferase, N-terminal; KEGG: pol:Bpro_2701 ribosomal protein S12 methylthiotransferase; SMART: Elongator protein 3/MiaB/NifB
YP_004234156.1	PFAM: Nucleotidyl transferase domain; KEGG: pfs:PFLU3428 hypothetical protein
YP_004234157.1	KEGG: vap:Vapar_5254 manganese transport protein MntH; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein
YP_004234158.1	PFAM: General substrate transporter; KEGG: vap:Vapar_0728 general substrate transporter
YP_004234159.1	KEGG: pag:PLES_17471 hypothetical protein
YP_004234160.1	KEGG: rpi:Rpic_0426 hypothetical protein
YP_004234161.1	PFAM: Drug/metabolite transporter; KEGG: pap:PSPA7_3724 hypothetical protein
YP_004234162.1	KEGG: pap:PSPA7_3725 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004234163.1	TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: dac:Daci_2871 elongation factor P; SMART: Elongation factor P, C-terminal
YP_004234164.1	KEGG: dia:Dtpsy_2361 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP015557; PFAM: Uncharacterised conserved protein UCP015557
YP_004234165.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_2360 transcriptional regulator, LysR family
YP_004234166.1	KEGG: dia:Dtpsy_2359 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004234167.1	KEGG: dia:Dtpsy_2358 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004234168.1	KEGG: dia:Dtpsy_2357 hypothetical protein
YP_004234169.1	KEGG: ajs:Ajs_2869 hypothetical protein
YP_004234170.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: rfr:Rfer_3100 RpiR family transcriptional regulator
YP_004234171.1	KEGG: vei:Veis_4589 peptidase T2, asparaginase 2; PFAM: Peptidase T2, asparaginase 2
YP_004234172.1	TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: vap:Vapar_3002 oligopeptide/dipeptide ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core
YP_004234173.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vap:Vapar_3003 extracellular solute-binding protein family 5
YP_004234174.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet1795 putative peptide ABC-transporter permease protein
YP_004234175.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0137 binding-protein-dependent transport systems inner membrane component
YP_004234176.1	PFAM: Peptidase S58, DmpA; KEGG: pol:Bpro_0136 aminopeptidase DmpA
YP_004234177.1	PFAM: Peptidase M55, D-aminopeptidase; KEGG: rfr:Rfer_3107 peptidase M55, D-aminopeptidase
YP_004234178.1	KEGG: vei:Veis_4736 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004234179.1	TIGRFAM: Excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; KEGG: dia:Dtpsy_1185 excinuclease ABC subunit C; SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1
YP_004234180.1	TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: dia:Dtpsy_1186 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004234181.1	KEGG: dac:Daci_2879 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004234182.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_1188 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004234183.1	KEGG: cti:RALTA_B1898 conserved hypothetical protein, UPF0065
YP_004234184.1	TIGRFAM: Argininosuccinate lyase; KEGG: cti:RALTA_B1897 argininosuccinate lyase; PFAM: Lyase 1, N-terminal
YP_004234185.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cti:RALTA_B1896 putative transcriptional regulator, LysR
YP_004234186.1	PFAM: Carboxymuconolactone decarboxylase; KEGG: vap:Vapar_3323 carboxymuconolactone decarboxylase
YP_004234187.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: vap:Vapar_5754 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain
YP_004234188.1	PFAM: Protein of unknown function DUF3423; KEGG: pna:Pnap_4817 hypothetical protein
YP_004234189.1	KEGG: vei:Veis_0179 hypothetical protein
YP_004234190.1	KEGG: hse:Hsero_3951 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004234191.1	KEGG: xtr:100486458 uncharacterized short-chain type dehydrogenase/reductase y4vI-like; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234192.1	KEGG: bpa:BPP0665 hypothetical protein
YP_004234193.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: hse:Hsero_3948 2,3-dihydroxybiphenyl dioxygenase
YP_004234194.1	PFAM: Protein of unknown function DUF1185; KEGG: xtr:100486318 hypothetical protein LOC100486318
YP_004234195.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: bbr:BB0670 putative hydrolase
YP_004234196.1	PFAM: NIPSNAP; KEGG: bvi:Bcep1808_5590 NIPSNAP family protein
YP_004234197.1	PFAM: Monooxygenase, FAD-binding; KEGG: hse:Hsero_3945 3-(3-hydroxyphenyl) propionate hydroxylase
YP_004234198.1	PFAM: Aldehyde dehydrogenase domain; KEGG: hse:Hsero_3944 NAD-dependent aldehyde dehydrogenase
YP_004234199.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: reu:Reut_B4208 succinate semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004234200.1	PFAM: Nitroreductase-like; KEGG: pfs:PFLU1519 putative nitroreductase
YP_004234201.1	KEGG: tmz:Tmz1t_2970 hypothetical protein
YP_004234202.1	KEGG: tmz:Tmz1t_2971 RND efflux transporter
YP_004234203.1	PFAM: Protein of unknown function DUF1302; KEGG: pfo:Pfl01_2750 hypothetical protein
YP_004234204.1	PFAM: Protein of unknown function DUF1329; KEGG: hse:Hsero_3526 hypothetical protein
YP_004234205.1	PFAM: Cytochrome b/b6, N-terminal; KEGG: hse:Hsero_3936 cytochrome b561 protein
YP_004234206.1	PFAM: Aldehyde dehydrogenase domain; KEGG: hse:Hsero_3954 NAD-dependent aldehyde dehydrogenase
YP_004234207.1	KEGG: pfs:PFLU3095 AraC family regulatory protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234208.1	PFAM: Amino acid permease domain; KEGG: pfs:PFLU3091 putative amino acid permease
YP_004234209.1	KEGG: hse:Hsero_1361 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004234210.1	KEGG: hse:Hsero_3942 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III
YP_004234211.1	PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: hse:Hsero_3952 transcription regulator protein
YP_004234212.1	KEGG: cgr:CAGL0L00227g hypothetical protein
YP_004234213.1	KEGG: ank:AnaeK_1047 phospholipase D/transphosphatidylase
YP_004234214.1	KEGG: pna:Pnap_2060 hypothetical protein
YP_004234215.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; KEGG: pol:Bpro_2149 sodium/hydrogen exchanger
YP_004234216.1	KEGG: ajs:Ajs_2610 peptidase M14, carboxypeptidase A; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A
YP_004234217.1	KEGG: dia:Dtpsy_1199 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004234218.1	KEGG: reu:Reut_A3345 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal
YP_004234219.1	TIGRFAM: ABC transporter ATP-binding protein, ChvD; PFAM: ABC transporter-like; KEGG: vei:Veis_4758 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004234220.1	PFAM: Protein of unknown function DUF1631; KEGG: ajs:Ajs_2607 hypothetical protein
YP_004234221.1	TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: ajs:Ajs_2606 TRAP transporter solute receptor TAXI family protein
YP_004234222.1	PFAM: Peptidase S58, DmpA; KEGG: vei:Veis_1669 peptidase S58, DmpA
YP_004234223.1	KEGG: bvi:Bcep1808_6265 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234224.1	KEGG: hse:Hsero_4769 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004234225.1	KEGG: bur:Bcep18194_B2513 glucose-methanol-choline oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal
YP_004234226.1	KEGG: bvi:Bcep1808_6268 alpha/beta hydrolase domain-containing protein
YP_004234227.1	KEGG: rpf:Rpic12D_3096 hypothetical protein
YP_004234228.1	PFAM: Enterobacterial TraT complement resistance; KEGG: dsa:Desal_0796 hypothetical protein
YP_004234229.1	KEGG: dsa:Desal_0797 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: Peptidase S1/S6, chymotrypsin/Hap
YP_004234230.1	PFAM: Domain of unknown function DUF861, cupin-3; KEGG: rlt:Rleg2_5000 protein of unknown function DUF861 cupin_3
YP_004234231.1	PFAM: Protein of unknown function DUF411; Copper binding periplasmic protein CusF; KEGG: dia:Dtpsy_1206 protein of unknown function DUF411
YP_004234232.1	PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; KEGG: dia:Dtpsy_1208 multicopper oxidase type 3
YP_004234233.1	PFAM: Outer membrane efflux protein; KEGG: dac:Daci_2911 copper tolerance protein
YP_004234234.1	KEGG: dac:Daci_2912 hypothetical protein
YP_004234235.1	KEGG: dac:Daci_2913 hypothetical protein
YP_004234236.1	PFAM: Protein of unknown function DUF161; KEGG: dia:Dtpsy_1212 protein of unknown function DUF161
YP_004234237.1	TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; ATPase, P-type, heavy metal translocating; KEGG: pna:Pnap_4001 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase
YP_004234238.1	KEGG: ajs:Ajs_2593 MerR family transcriptional regulator; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004234239.1	PFAM: Domain of unknown function DUF140; KEGG: dia:Dtpsy_1216 protein of unknown function DUF140
YP_004234240.1	KEGG: dia:Dtpsy_1217 mammalian cell entry related domain protein
YP_004234241.1	KEGG: ajs:Ajs_2590 hypothetical protein
YP_004234242.1	KEGG: dia:Dtpsy_1219 hypothetical protein
YP_004234243.1	KEGG: dia:Dtpsy_1220 carbohydrate kinase, YjeF related protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal
YP_004234244.1	KEGG: ajs:Ajs_2587 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004234245.1	KEGG: ajs:Ajs_2585 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2
YP_004234246.1	KEGG: dia:Dtpsy_1224 elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal
YP_004234247.1	KEGG: dia:Dtpsy_1225 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase
YP_004234248.1	KEGG: dia:Dtpsy_1226 ribosome recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor
YP_004234249.1	PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: dia:Dtpsy_1227 undecaprenyl diphosphate synthase
YP_004234250.1	PFAM: Phosphatidate cytidylyltransferase; KEGG: ajs:Ajs_2580 phosphatidate cytidylyltransferase
YP_004234251.1	TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: dia:Dtpsy_1229 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
YP_004234252.1	TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; PDZ/DHR/GLGF; KEGG: dia:Dtpsy_1230 membrane-associated zinc metalloprotease; SMART: PDZ/DHR/GLGF
YP_004234253.1	KEGG: ajs:Ajs_2577 surface antigen (D15); TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number
YP_004234254.1	KEGG: ajs:Ajs_2576 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH)
YP_004234255.1	TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; KEGG: dia:Dtpsy_1233 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat
YP_004234256.1	KEGG: dia:Dtpsy_1234 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004234257.1	KEGG: vap:Vapar_2611 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_004234258.1	TIGRFAM: Glycosyl transferase, family 19; KEGG: dia:Dtpsy_1236 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19
YP_004234259.1	KEGG: dia:Dtpsy_1237 ribonuclease HII; PFAM: Ribonuclease HII/HIII
YP_004234260.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: dia:Dtpsy_1238 tRNA/rRNA methyltransferase (SpoU)
YP_004234261.1	KEGG: cja:CJA_1296 iron-regulated membrane protein; manually curated; PFAM: PepSY-associated TM helix
YP_004234262.1	KEGG: pst:PSPTO_1210 hypothetical protein
YP_004234263.1	TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: pae:PA1910 ferric-mycobactin receptor, FemA; SMART: Secretin/TonB, short N-terminal
YP_004234264.1	PFAM: FecR protein; KEGG: neu:NE1191 putative transmembrane sensor
YP_004234265.1	KEGG: neu:NE1192 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004234266.1	KEGG: dac:Daci_3263 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase
YP_004234267.1	KEGG: ajs:Ajs_2759 aminopeptidase N; TIGRFAM: Peptidase M1, alanyl aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal
YP_004234268.1	KEGG: nda:Ndas_2312 hypothetical protein
YP_004234269.1	KEGG: scl:sce8290 hypothetical protein
YP_004234270.1	manually curated; KEGG: bpm:BURPS1710b_3602 hypothetical protein
YP_004234271.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dia:Dtpsy_2246 alpha/beta hydrolase fold protein
YP_004234272.1	KEGG: psa:PST_0858 endonuclease; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; SMART: DNA glycosylase/AP lyase, catalytic domain
YP_004234273.1	PFAM: NADP-dependent oxidoreductase domain; KEGG: dia:Dtpsy_2245 aldo/keto reductase
YP_004234274.1	KEGG: ajs:Ajs_2754 YbaK/EbsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain
YP_004234275.1	TIGRFAM: Glycerol-3-phosphate acyltransferase, bacteria; HAMAP: Glycerol-3-phosphate acyltransferase, bacteria; KEGG: dia:Dtpsy_2243 protein of unknown function DUF205; PFAM: Glycerol-3-phosphate acyltransferase, bacteria
YP_004234276.1	KEGG: vei:Veis_3466 putative metal dependent phosphohydrolase
YP_004234277.1	PFAM: Peptidase A2A, retrovirus RVP subgroup; KEGG: ajs:Ajs_2751 hypothetical protein
YP_004234278.1	KEGG: xtr:100487657 UPF0234 protein Dtpsy_2240-like; HAMAP: Protein of unknown function DUF520; PFAM: Protein of unknown function DUF520
YP_004234279.1	TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: dia:Dtpsy_2239 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal
YP_004234280.1	TIGRFAM: Argininosuccinate synthase; KEGG: dia:Dtpsy_2233 argininosuccinate synthase; PFAM: Argininosuccinate synthase
YP_004234281.1	PFAM: Protein of unknown function DUF1255; KEGG: dia:Dtpsy_2232 protein of unknown function DUF1255
YP_004234282.1	KEGG: dia:Dtpsy_2231 17 kDa surface antigen
YP_004234283.1	KEGG: ajs:Ajs_2740 arsenate reductase and related; TIGRFAM: Transcriptional regulator Spx/MgsR; PFAM: Arsenate reductase-like
YP_004234284.1	TIGRFAM: Folylpolyglutamate synthetase; KEGG: ajs:Ajs_2739 FolC bifunctional protein; PFAM: Mur ligase, central; Mur ligase, C-terminal
YP_004234285.1	PFAM: Sporulation-related domain; KEGG: dia:Dtpsy_2228 sporulation domain protein
YP_004234286.1	PFAM: Colicin V production, CvpA; KEGG: dia:Dtpsy_2227 colicin V production protein
YP_004234287.1	TIGRFAM: Amidophosphoribosyl transferase; KEGG: vei:Veis_3371 amidophosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Glutamine amidotransferase, class-II
YP_004234288.1	TIGRFAM: O-succinylhomoserine sulfhydrylase; KEGG: ctt:CtCNB1_1407 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004234289.1	TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: vei:Veis_3370 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004234290.1	KEGG: vap:Vapar_1365 hypothetical protein
YP_004234291.1	manually curated; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; KEGG: ajs:Ajs_1702 Bcr/CflA subfamily drug resistance transporter; PFAM: Major facilitator superfamily MFS-1
YP_004234292.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ajs:Ajs_1703 major facilitator superfamily transporter
YP_004234293.1	PFAM: Protein of unknown function DUF72; KEGG: dia:Dtpsy_1999 protein of unknown function DUF72
YP_004234294.1	KEGG: cag:Cagg_0090 extracellular solute-binding protein family 1
YP_004234295.1	KEGG: ajs:Ajs_1707 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1
YP_004234296.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: dia:Dtpsy_1996 putative signal transduction protein
YP_004234297.1	KEGG: dia:Dtpsy_1995 hypothetical protein
YP_004234298.1	KEGG: ajs:Ajs_1711 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004234299.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: dia:Dtpsy_1992 fumarylacetoacetate (FAA) hydrolase
YP_004234300.1	KEGG: ajs:Ajs_1713 alpha/beta hydrolase domain-containing protein
YP_004234301.1	KEGG: dia:Dtpsy_1990 thioesterase superfamily protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily; GCN5-related N-acetyltransferase (GNAT) domain
YP_004234302.1	KEGG: ajs:Ajs_1715 glycine cleavage T protein (aminomethyl transferase); TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal
YP_004234303.1	KEGG: ajs:Ajs_1716 aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755
YP_004234304.1	TIGRFAM: Thymidylate kinase; KEGG: dia:Dtpsy_1987 thymidylate kinase; PFAM: Thymidylate kinase
YP_004234305.1	KEGG: ajs:Ajs_1718 DNA-directed DNA polymerase
YP_004234306.1	KEGG: dia:Dtpsy_1985 type IV pilus assembly PilZ; manually curated; PFAM: Type IV pilus assembly PilZ
YP_004234307.1	KEGG: ajs:Ajs_1720 TatD family hydrolase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related
YP_004234308.1	KEGG: dia:Dtpsy_1983 ankyrin; PFAM: Ankyrin repeat; SMART: Ankyrin repeat
YP_004234309.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, lipid A export, MsbA; KEGG: dia:Dtpsy_1982 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter, transmembrane domain; ABC transporter-like
YP_004234310.1	KEGG: ajs:Ajs_1723 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat-containing protein, TolB; PFAM: TolB, N-terminal; WD40-like Beta Propeller
YP_004234311.1	KEGG: dia:Dtpsy_1980 peptidoglycan-associated lipoprotein; TIGRFAM: Peptidoglycan-associated lipoprotein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal
YP_004234312.1	TIGRFAM: Tol-Pal system, YbgF; KEGG: ajs:Ajs_1725 TPR repeat-containing protein
YP_004234313.1	PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: dac:Daci_3397 UBA/ThiF-type NAD/FAD binding protein
YP_004234314.1	KEGG: ddi:DDB_G0287699 hypothetical protein
YP_004234315.1	KEGG: bcx:BCA_3280 hypothetical protein
YP_004234316.1	KEGG: xcv:XCVd0090 IS1477 putative transposase
YP_004234317.1	KEGG: pzu:PHZ_c3035 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF1810
YP_004234318.1	PFAM: Extracellular ligand-binding receptor; KEGG: hse:Hsero_0174 branched-chain amino acid ABC transporter periplasmic protein
YP_004234319.1	PFAM: Ornithine cyclodeaminase/mu-crystallin; KEGG: net:Neut_2213 ornithine cyclodeaminase
YP_004234320.1	KEGG: dac:Daci_3358 hypothetical protein
YP_004234321.1	KEGG: bpt:Bpet3210 putative DNA/RNA endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A
YP_004234322.1	PFAM: Protein of unknown function DUF2789; KEGG: smt:Smal_3313 hypothetical protein
YP_004234323.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: aba:Acid345_4531 phytanoyl-CoA dioxygenase
YP_004234324.1	KEGG: dia:Dtpsy_2402 hypothetical protein
YP_004234325.1	KEGG: hch:HCH_03669 endoglucanase; PFAM: Cellulose-binding domain, family II, bacterial type; Barwin-related endoglucanase; SMART: Cellulose-binding domain, family II, bacterial type; Expansin/pollen allergen, DPBB domain
YP_004234326.1	KEGG: dia:Dtpsy_2401 hypothetical protein
YP_004234327.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Cache; KEGG: vap:Vapar_4321 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004234328.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_1817 LysR family transcriptional regulator
YP_004234329.1	PFAM: Protein of unknown function DUF1446; KEGG: dia:Dtpsy_1910 protein of unknown function DUF1446
YP_004234330.1	KEGG: dia:Dtpsy_1909 hypothetical protein
YP_004234331.1	KEGG: dia:Dtpsy_1908 hypothetical protein
YP_004234332.1	KEGG: dac:Daci_0716 hypothetical protein
YP_004234333.1	PFAM: Cytochrome c, class I; KEGG: mpt:Mpe_A0754 putative cytochrome c
YP_004234334.1	KEGG: dia:Dtpsy_1243 gluconate 2-dehydrogenase (acceptor); PFAM: Cytochrome c, class I
YP_004234335.1	PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1244 hypothetical protein
YP_004234336.1	KEGG: dac:Daci_2988 hypothetical protein; HAMAP: Ribosome maturation factor RimP; PFAM: Ribosome maturation factor RimP
YP_004234337.1	TIGRFAM: Transcription termination factor NusA; Transcription termination factor NusA, C-terminal duplication; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: dia:Dtpsy_1246 NusA antitermination factor; SMART: RNA-binding domain, S1; K Homology
YP_004234338.1	KEGG: dia:Dtpsy_1247 translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Initiation factor 2 associated region, bacterial; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; Translation initiation factor IF- 2, domain 3
YP_004234339.1	KEGG: ajs:Ajs_2560 ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A
YP_004234340.1	KEGG: ajs:Ajs_2559 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: Pseudouridine synthase II; tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal
YP_004234341.1	KEGG: vap:Vapar_2751 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal
YP_004234342.1	PFAM: Integral membrane protein TerC; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: xtr:100496990 UPF0053 inner membrane protein yoaE-like
YP_004234343.1	KEGG: xtr:100495782 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial-like; PFAM: Crotonase, core
YP_004234344.1	KEGG: dac:Daci_3001 putative transmembrane anti-sigma factor
YP_004234345.1	KEGG: dac:Daci_3002 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004234346.1	KEGG: dia:Dtpsy_1255 secreted repeat of unknown function
YP_004234347.1	KEGG: dia:Dtpsy_1256 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SsrA-binding protein
YP_004234348.1	PFAM: Streptomyces cyclase/dehydrase; KEGG: dia:Dtpsy_1257 cyclase/dehydrase
YP_004234349.1	PFAM: Uncharacterised protein family UPF0125; KEGG: ajs:Ajs_2550 hypothetical protein
YP_004234350.1	KEGG: dac:Daci_5949 hypothetical protein
YP_004234351.1	KEGG: ajs:Ajs_2549 hypothetical protein
YP_004234352.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: vei:Veis_1246 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core
YP_004234353.1	KEGG: dac:Daci_3011 prevent-host-death family protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein
YP_004234354.1	KEGG: ctt:CtCNB1_2409 hypothetical protein
YP_004234355.1	TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; KEGG: vap:Vapar_2764 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase
YP_004234356.1	PFAM: Integrase, catalytic core, phage; KEGG: rme:Rmet_1465 phage integrase
YP_004234357.1	KEGG: dia:Dtpsy_1263 hypothetical protein
YP_004234358.1	KEGG: rme:Rmet_1467 prophage CP4-57 regulatory
YP_004234359.1	KEGG: hna:Hneap_1661 hypothetical protein
YP_004234360.1	manually curated; KEGG: pau:PA14_60070 hypothetical protein
YP_004234361.1	PFAM: DNA helicase, UvrD/REP type; KEGG: pau:PA14_60080 hypothetical protein
YP_004234362.1	PFAM: Prophage CP4-57 regulatory; KEGG: dia:Dtpsy_1265 phage transcriptional regulator, AlpA
YP_004234363.1	KEGG: sgr:SGR_684 hypothetical protein
YP_004234364.1	KEGG: dia:Dtpsy_3537 hypothetical protein
YP_004234365.1	PFAM: Monooxygenase, FAD-binding; KEGG: dac:Daci_4378 monooxygenase FAD-binding
YP_004234366.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_3134 transcriptional regulator, LysR family
YP_004234367.1	KEGG: vap:Vapar_0870 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004234368.1	PFAM: Secretion protein HlyD; KEGG: vap:Vapar_0869 secretion protein HlyD family protein
YP_004234369.1	PFAM: Protein AaeX; KEGG: vap:Vapar_0868 protein of unknown function DUF1656
YP_004234370.1	PFAM: Fusaric acid resistance protein, conserved region; KEGG: vap:Vapar_0867 fusaric acid resistance protein conserved region
YP_004234371.1	KEGG: vap:Vapar_0866 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004234372.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bam:Bamb_1990 LysR family transcriptional regulator
YP_004234373.1	KEGG: rru:Rru_A0030 hypothetical protein
YP_004234374.1	KEGG: rru:Rru_A0029 hypothetical protein
YP_004234375.1	KEGG: bid:Bind_2964 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004234376.1	KEGG: dze:Dd1591_2060 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234377.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bam:Bamb_4735 short-chain dehydrogenase/reductase SDR
YP_004234378.1	KEGG: hse:Hsero_4348 oxidoreductase
YP_004234379.1	KEGG: pfs:PFLU2260 hypothetical protein
YP_004234380.1	KEGG: mmw:Mmwyl1_3816 hypothetical protein
YP_004234381.1	KEGG: pap:PSPA7_4418 ferripyoverdine receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004234382.1	KEGG: bgl:bglu_1p0370 helix-turn-helix-domain containing protein AraC type; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234383.1	KEGG: vap:Vapar_2202 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234384.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_2201 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004234385.1	KEGG: nwa:Nwat_0066 monooxygenase FAD-binding protein; PFAM: Monooxygenase, FAD-binding
YP_004234386.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mau:Micau_0069 regulatory protein TetR
YP_004234387.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345
YP_004234388.1	KEGG: ppw:PputW619_2519 hypothetical protein
YP_004234389.1	KEGG: bur:Bcep18194_B0648 rhs family protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; PAAR motif; YD repeat
YP_004234390.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004234391.1	PFAM: Methyltransferase type 12; KEGG: smt:Smal_0912 methyltransferase type 12
YP_004234392.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bcj:BCAL2558 putative pyridine nucleotide-disulphide oxidoreductase
YP_004234393.1	PFAM: Transcription regulator Rrf2; KEGG: bcj:BCAL2559 putative transcriptional regulator
YP_004234394.1	KEGG: acp:A2cp1_1756 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain
YP_004234395.1	KEGG: bpy:Bphyt_4950 NUDIX hydrolase; TIGRFAM: Nucleoside diphosphate pyrophosphatase; PFAM: NUDIX hydrolase domain
YP_004234396.1	KEGG: xom:XOO_3844 hypothetical protein
YP_004234397.1	PFAM: Amidohydrolase 3; KEGG: cvi:CV_2670 hypothetical protein
YP_004234398.1	KEGG: dac:Daci_1311 hypothetical protein
YP_004234399.1	KEGG: xal:XALc_1794 putative secreted protein
YP_004234400.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-4; KEGG: azc:AZC_3914 putative diguanylate cyclase; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004234401.1	PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: bja:bll6383 transcriptional regulatory protein
YP_004234402.1	KEGG: cti:RALTA_B0545 conserved hypothetical protein, UPF0065
YP_004234403.1	KEGG: bbr:BB3868 hypothetical protein
YP_004234404.1	KEGG: bpa:BPP0667 hypothetical protein
YP_004234405.1	PFAM: Glutathione S-transferase, C-terminal; KEGG: bpa:BPP0666 glutathione S-transferase
YP_004234406.1	KEGG: pol:Bpro_0127 sigma-54 dependent trancsriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Activator of aromatic catabolism; Helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR; SMART: ATPase, AAA+ type, core
YP_004234407.1	KEGG: rso:RS05194 putative benzaldehyde dehydrogenase oxidoreductase protein; PFAM: Aldehyde dehydrogenase domain
YP_004234408.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_0129 3-alpha-hydroxysteroid dehydrogenase
YP_004234409.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: bbt:BBta_3462 hypothetical protein
YP_004234410.1	PFAM: ABC transporter-like; KEGG: mlo:mlr8227 iron ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core
YP_004234411.1	PFAM: Periplasmic binding protein; KEGG: mlo:mlr8228 iron (III) ABC transporter, periplasmic-binding protein
YP_004234412.1	PFAM: ABC transporter permease protein; KEGG: mlo:mlr8229 ABC transporter, permease protein
YP_004234413.1	KEGG: mms:mma_3494 hypothetical protein
YP_004234414.1	TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 3; KEGG: dia:Dtpsy_1427 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase domain
YP_004234415.1	KEGG: dia:Dtpsy_1428 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004234416.1	KEGG: ajs:Ajs_2414 hypothetical protein
YP_004234417.1	KEGG: xal:XALc_1910 hypothetical secreted signal peptide protein
YP_004234418.1	KEGG: dia:Dtpsy_1435 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; PFAM: (Uracil-5)-methyltransferase
YP_004234419.1	KEGG: ajs:Ajs_2412 hypothetical protein
YP_004234420.1	PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: dia:Dtpsy_1437 protein of unknown function UPF0005
YP_004234421.1	PFAM: Domain of unknown function DUF336; KEGG: xtr:100495948 protein glcG-like
YP_004234422.1	PFAM: Hemin uptake protein HemP; KEGG: ajs:Ajs_2409 hypothetical protein
YP_004234423.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: dia:Dtpsy_1440 biopolymer transport protein ExbD/TolR
YP_004234424.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_1441 MotA/TolQ/ExbB proton channel
YP_004234425.1	KEGG: dia:Dtpsy_1442 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004234426.1	PFAM: BFD-like [2Fe-2S]-binding domain; KEGG: ctt:CtCNB1_3046 hypothetical protein
YP_004234427.1	KEGG: dia:Dtpsy_1366 phasin family protein; TIGRFAM: Phasin, subfamily 1; PFAM: Phasin
YP_004234428.1	PFAM: Thioesterase superfamily; KEGG: dia:Dtpsy_1367 thioesterase superfamily protein
YP_004234429.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: vap:Vapar_1782 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004234430.1	TIGRFAM: Nicotinate phosphoribosyltransferase; KEGG: vei:Veis_2067 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like
YP_004234431.1	KEGG: vei:Veis_2069 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004234432.1	PFAM: DNA recombination RmuC; KEGG: ajs:Ajs_2489 hypothetical protein
YP_004234433.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dia:Dtpsy_1372 major facilitator superfamily MFS_1
YP_004234434.1	KEGG: rsl:RPSI07_2863 hypothethical protein
YP_004234435.1	KEGG: ajs:Ajs_2487 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
YP_004234436.1	PFAM: Camphor resistance CrcB protein; KEGG: vei:Veis_2340 camphor resistance protein CrcB
YP_004234437.1	KEGG: pol:Bpro_1779 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004234438.1	KEGG: pol:Bpro_1778 hypothetical protein
YP_004234439.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: pol:Bpro_1774 TRAP dicarboxylate transporter-DctP subunit
YP_004234440.1	PFAM: Peptidase M14, carboxypeptidase A; KEGG: dia:Dtpsy_1379 hypothetical protein
YP_004234441.1	KEGG: dia:Dtpsy_1380 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; Hydantoinase/oxoprolinase
YP_004234442.1	PFAM: Na+/H+ antiporter subunit; KEGG: dia:Dtpsy_1381 Na+/H+ antiporter subunit
YP_004234443.1	PFAM: Multiple resistance and pH regulation protein F; KEGG: dia:Dtpsy_1382 multiple resistance and pH regulation protein F
YP_004234444.1	PFAM: cation antiporter; KEGG: dac:Daci_4732 putative monovalent cation/H+ antiporter subunit E
YP_004234445.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: dia:Dtpsy_1384 putative monovalent cation/H+ antiporter subunit D
YP_004234446.1	PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: dia:Dtpsy_1385 putative monovalent cation/H+ antiporter subunit C
YP_004234447.1	KEGG: dia:Dtpsy_1386 putative monovalent cation/H+ antiporter subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; Na+/H+ antiporter MnhB subunit-related protein; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal
YP_004234448.1	KEGG: dia:Dtpsy_1388 tetratricopeptide repeat protein
YP_004234449.1	PFAM: Protein of unknown function DUF1049; KEGG: dia:Dtpsy_1389 hypothetical protein
YP_004234450.1	KEGG: dia:Dtpsy_1390 integration host factor, beta subunit; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004234451.1	TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA-binding domain; KEGG: dia:Dtpsy_1391 30S ribosomal protein S1; SMART: RNA-binding domain, S1
YP_004234452.1	TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; Cytidylate kinase; KEGG: dia:Dtpsy_1392 bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase; PFAM: Enolpyruvate transferase domain; Cytidylate kinase domain
YP_004234453.1	KEGG: ajs:Ajs_2467 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase
YP_004234454.1	TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Amino acid-binding ACT; Chorismate mutase, type II; KEGG: vei:Veis_3121 chorismate mutase; SMART: Chorismate mutase
YP_004234455.1	TIGRFAM: Phosphoserine aminotransferase, subgroup; KEGG: dia:Dtpsy_1395 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004234456.1	SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: dia:Dtpsy_1396 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
YP_004234457.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dia:Dtpsy_1397 OmpA/MotB domain protein
YP_004234458.1	TIGRFAM: Ubiquinone biosynthesis O-methyltransferase; KEGG: vap:Vapar_1622 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11
YP_004234459.1	TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: vei:Veis_3116 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase
YP_004234460.1	KEGG: bsb:Bresu_1541 lipolytic protein G-D-S-L family
YP_004234461.1	KEGG: vap:Vapar_0037 histidine kinase; PFAM: Two-component sensor kinase N-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234462.1	KEGG: vap:Vapar_0036 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004234463.1	KEGG: vap:Vapar_6019 hypothetical protein
YP_004234464.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: vap:Vapar_6020 protein of unknown function DUF112 transmembrane
YP_004234465.1	KEGG: dac:Daci_2570 hypothetical protein
YP_004234466.1	PFAM: Porin, Gram-negative type; KEGG: dac:Daci_2544 porin
YP_004234467.1	KEGG: pop:POPTR_595990 hypothetical protein
YP_004234468.1	KEGG: ctt:CtCNB1_1898 hypothetical protein
YP_004234469.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2547 LysR family transcriptional regulator
YP_004234470.1	KEGG: dac:Daci_2962 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004234471.1	PFAM: Nodulation efficiency, NfeD; KEGG: ctt:CtCNB1_1776 hypothetical protein
YP_004234472.1	KEGG: ajs:Ajs_2762 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; Orn/Lys/Arg decarboxylase, N-terminal
YP_004234473.1	KEGG: dac:Daci_5784 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain
YP_004234474.1	KEGG: dac:Daci_2972 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234475.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vei:Veis_3814 extracellular solute-binding protein
YP_004234476.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_3813 binding-protein-dependent transport systems inner membrane component
YP_004234477.1	KEGG: dia:Dtpsy_1916 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004234478.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: ajs:Ajs_1813 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234479.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: ctt:CtCNB1_1513 diguanylate cyclase/phosphodiesterase with; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004234480.1	PFAM: Uncharacterised protein family UPF0118; KEGG: dia:Dtpsy_1907 protein of unknown function UPF0118
YP_004234481.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: dac:Daci_3493 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component
YP_004234482.1	TIGRFAM: Dihydrolipoamide succinyltransferase; KEGG: dia:Dtpsy_1905 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004234483.1	TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: ajs:Ajs_1824 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004234484.1	PFAM: ATPase, AFG1-like; KEGG: dia:Dtpsy_1903 AFG1-family ATPase
YP_004234485.1	KEGG: dia:Dtpsy_1902 hypothetical protein
YP_004234486.1	KEGG: dia:Dtpsy_1901 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like
YP_004234487.1	SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; KEGG: vap:Vapar_2178 helicase C2
YP_004234488.1	TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: dia:Dtpsy_1899 outer membrane assembly lipoprotein YfiO
YP_004234489.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: ajs:Ajs_1830 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal
YP_004234490.1	PFAM: Adaptor protein ClpS, core; KEGG: dia:Dtpsy_1897 ATP-dependent Clp protease adaptor protein ClpS
YP_004234491.1	TIGRFAM: ATP-dependent Clp protease ATP-binding subunit ClpA; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: dia:Dtpsy_1896 ATP-dependent Clp protease, ATP-binding subunit ClpA; SMART: ATPase, AAA+ type, core
YP_004234492.1	PFAM: Dienelactone hydrolase; KEGG: bcm:Bcenmc03_5513 dienelactone hydrolase-like protein
YP_004234493.1	KEGG: ara:Arad_0700 transcriptional regulator protein; PFAM: Bacterial transcription activator, effector binding; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Bacterial transcription activator, effector binding
YP_004234494.1	KEGG: ajs:Ajs_1837 lytic murein transglycosylase; TIGRFAM: Lytic murein transglycosylase; PFAM: Peptidoglycan binding-like
YP_004234495.1	KEGG: ajs:Ajs_1838 exonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III
YP_004234496.1	PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: ajs:Ajs_1839 silent information regulator protein Sir2
YP_004234497.1	KEGG: ajs:Ajs_1840 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004234498.1	KEGG: mbr:MONBRDRAFT_15575 hypothetical protein
YP_004234499.1	PFAM: Protein of unknown function DUF779; KEGG: dia:Dtpsy_1692 protein of unknown function DUF779
YP_004234500.1	PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; KEGG: dia:Dtpsy_1693 alcohol dehydrogenase GroES domain protein
YP_004234501.1	PFAM: Aldehyde dehydrogenase domain; KEGG: dia:Dtpsy_1694 aldehyde dehydrogenase
YP_004234502.1	KEGG: pna:Pnap_3253 heat shock protein DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal
YP_004234503.1	KEGG: pna:Pnap_3252 hypothetical protein
YP_004234504.1	KEGG: pol:Bpro_3895 hypothetical protein
YP_004234505.1	KEGG: rfr:Rfer_0638 hypothetical protein
YP_004234506.1	KEGG: bav:BAV1107 AraC-family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234507.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bav:BAV1106 amino acid efflux protein
YP_004234508.1	KEGG: scl:sce2233 hypothetical protein
YP_004234509.1	KEGG: sil:SPO3014 hypothetical protein
YP_004234510.1	PFAM: Signal transduction response regulator, C-terminal; KEGG: bja:bll1217 hypothetical protein; SMART: Signal transduction response regulator, C-terminal
YP_004234511.1	KEGG: vei:Veis_4430 cytosine deaminase; PFAM: Amidohydrolase 3
YP_004234512.1	manually curated; KEGG: phe:Phep_1252 hypothetical protein
YP_004234513.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rce:RC1_2914 glyoxalase family protein
YP_004234514.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dac:Daci_2652 GCN5-related N-acetyltransferase
YP_004234515.1	PFAM: ABC transporter permease; KEGG: vap:Vapar_2656 inner-membrane translocator
YP_004234516.1	PFAM: ABC transporter permease; KEGG: vap:Vapar_2657 inner-membrane translocator
YP_004234517.1	PFAM: ABC transporter-like; KEGG: vap:Vapar_2658 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234518.1	PFAM: Basic membrane lipoprotein; KEGG: vap:Vapar_2660 basic membrane lipoprotein
YP_004234519.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ATPase, type I secretion system, HlyB; KEGG: xac:XAC2202 hemolysin secretion protein B; PFAM: ABC transporter, transmembrane domain; Peptidase C39, bacteriocin processing; ABC transporter-like
YP_004234520.1	KEGG: xac:XAC2201 hemolysin secretion protein D; TIGRFAM: Type I secretion membrane fusion protein, HlyD; PFAM: Secretion protein HlyD
YP_004234521.1	KEGG: xac:XAC2200 hypothetical protein
YP_004234522.1	KEGG: reh:H16_B2314 hypothetical protein
YP_004234523.1	KEGG: mat:MARTH_orf186 Pol_IV_KAPpa DNA polymerase
YP_004234524.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004234525.1	KEGG: rsl:RPSI07_3165 putative rtx family calcium-binding cytotoxins and bacteriocins protein
YP_004234526.1	KEGG: xac:XAC2200 hypothetical protein
YP_004234527.1	KEGG: rso:RSc0249 putative calcium binding hemolysin protein; manually curated; PFAM: Haemolysin-type calcium binding-related; Haemolysin-type calcium-binding repeat
YP_004234528.1	KEGG: ajs:Ajs_1893 uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004234529.1	KEGG: dia:Dtpsy_1698 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004234530.1	PFAM: Crotonase, core; KEGG: dia:Dtpsy_1699 enoyl-CoA hydratase/isomerase
YP_004234531.1	PFAM: Auxin efflux carrier; KEGG: bxe:Bxe_B0241 malonate transporter
YP_004234532.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bgf:BC1003_4812 LysR family transcriptional regulator
YP_004234533.1	PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: dia:Dtpsy_1701 glutathione S-transferase domain protein
YP_004234534.1	KEGG: dia:Dtpsy_1702 protein of unknown function DUF853 NPT hydrolase putative; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; SMART: ATPase, AAA+ type, core
YP_004234535.1	TIGRFAM: Protein of unknown function DUF28; HAMAP: Protein of unknown function DUF28; KEGG: dia:Dtpsy_1703 hypothetical protein; PFAM: Protein of unknown function DUF28
YP_004234536.1	PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; TIGRFAM: Phosphoribosylglycinamide synthetase; HAMAP: Phosphoribosylglycinamide synthetase; KEGG: ajs:Ajs_1899 phosphoribosylamine--glycine ligase
YP_004234537.1	KEGG: xtr:100495626 coproporphyrinogen-III oxidase, aerobic-like; PFAM: Coproporphyrinogen III oxidase
YP_004234538.1	KEGG: ajs:Ajs_1901 iojap-like protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like
YP_004234539.1	KEGG: dia:Dtpsy_1707 rRNA large subunit methyltransferase; TIGRFAM: Ribosomal RNA large subunit methyltransferase H; PFAM: SPOUT methyltransferase, predicted
YP_004234540.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cvi:CV_4043 ribosomal-protein-alanine N-acetyltransferase
YP_004234541.1	KEGG: dia:Dtpsy_1708 maf protein; TIGRFAM: Maf-like protein; PFAM: Maf-like protein
YP_004234542.1	TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA-binding domain; KEGG: ajs:Ajs_1914 ribonuclease G; SMART: RNA-binding domain, S1
YP_004234543.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004234544.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004234545.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004234546.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004234547.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004234549.1	KEGG: dpo:Dpse_GA23224 GA23224 gene product from transcript GA23224-RA
YP_004234550.1	KEGG: vap:Vapar_3422 hypothetical protein
YP_004234551.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: psb:Psyr_3774 PAS; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif
YP_004234552.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: bxe:Bxe_B1312 putative hydrolase
YP_004234553.1	KEGG: acp:A2cp1_1579 response regulator receiver protein
YP_004234554.1	KEGG: ctt:CtCNB1_0390 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; Monooxygenase, FAD-binding
YP_004234555.1	KEGG: rsl:RPSI07_mp0049 putative oxidoreductase (beta-hydroxyacyl-CoA dehydrogenase) protein (AbmB); PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234556.1	KEGG: rpf:Rpic12D_3946 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004234557.1	PFAM: Crotonase, core; KEGG: rpf:Rpic12D_3947 enoyl-CoA hydratase
YP_004234558.1	KEGG: rsl:RPSI07_mp0052 putative acyl-CoA dehydrogenase oxidoreductase protein (AbmD); PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004234559.1	KEGG: rso:RS02012 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004234560.1	PFAM: Extracellular ligand-binding receptor; KEGG: dar:Daro_4043 extracellular ligand-binding receptor
YP_004234561.1	PFAM: ABC transporter permease; KEGG: pol:Bpro_5128 inner-membrane translocator
YP_004234562.1	PFAM: ABC transporter permease; KEGG: pol:Bpro_5129 inner-membrane translocator
YP_004234563.1	PFAM: ABC transporter-like; KEGG: pol:Bpro_5130 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234564.1	KEGG: pol:Bpro_5131 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004234565.1	PFAM: Endoribonuclease L-PSP; KEGG: rsl:RPSI07_mp0055 putative translation initiation inhibitor, YjgH family (AbmE )
YP_004234566.1	KEGG: npu:Npun_R2365 putative esterase
YP_004234567.1	KEGG: dia:Dtpsy_1720 putative aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004234568.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1721 transcriptional regulator CysB-like protein
YP_004234569.1	PFAM: Cobalamin (vitamin B12) biosynthesis CbiX; KEGG: xtr:100490856 sirohydrochlorin cobaltochelatase-like
YP_004234570.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: dia:Dtpsy_1723 permease YjgP/YjgQ family protein
YP_004234571.1	PFAM: Permease YjgP/YjgQ, predicted; KEGG: dia:Dtpsy_1724 permease YjgP/YjgQ family protein
YP_004234572.1	KEGG: vei:Veis_4922 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_004234573.1	PFAM: DNA polymerase III chi subunit, HolC; KEGG: vei:Veis_4921 DNA polymerase III chi subunit, HolC
YP_004234574.1	KEGG: dia:Dtpsy_1727 hypothetical protein
YP_004234575.1	PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_1728 extracellular ligand-binding receptor
YP_004234576.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bcm:Bcenmc03_0896 lysine exporter protein LysE/YggA
YP_004234577.1	PFAM: Citrate synthase-like; KEGG: hse:Hsero_1269 citrate synthase
YP_004234578.1	PFAM: CoA-transferase family III; KEGG: bur:Bcep18194_B1149 L-carnitine dehydratase/bile acid-inducible protein F
YP_004234579.1	KEGG: dia:Dtpsy_1729 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004234580.1	KEGG: vei:Veis_0878 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004234581.1	PFAM: Type IV pilus assembly PilZ; KEGG: app:CAP2UW1_4227 type IV pilus assembly PilZ
YP_004234582.1	PFAM: Protein of unknown function DUF2257; KEGG: dia:Dtpsy_1731 hypothetical protein
YP_004234583.1	PFAM: UspA; KEGG: dia:Dtpsy_1732 UspA domain protein
YP_004234584.1	PFAM: Transposase, IS4-like; Transposase InsH, N-terminal; KEGG: bmj:BMULJ_05861 ISBmu20 transposase
YP_004234585.1	KEGG: rsl:RPSI07_mp1559 exported protein of unknown function
YP_004234586.1	PFAM: K+ potassium transporter; KEGG: vei:Veis_1253 K+ potassium transporter
YP_004234587.1	KEGG: ajs:Ajs_1930 hypothetical protein
YP_004234588.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_1735 short-chain dehydrogenase/reductase SDR
YP_004234589.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dac:Daci_4330 pseudouridine synthase
YP_004234590.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dia:Dtpsy_1737 signal transduction histidine kinase, nitrogen specific, NtrB; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234591.1	PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: cja:CJA_3195 putative macrolide-efflux protein
YP_004234592.1	KEGG: bpr:GBP346_A2238 transcriptional regulator, MerR family/albicidin resistance protein; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; TipAS antibiotic-recognition; SMART: HTH transcriptional regulator, MerR
YP_004234593.1	KEGG: ajs:Ajs_1935 peptidylprolyl isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type
YP_004234594.1	KEGG: dia:Dtpsy_1739 glycine dehydrogenase; TIGRFAM: Glycine cleavage system P protein, homodimeric; PFAM: Glycine cleavage system P-protein, N-terminal
YP_004234595.1	KEGG: dia:Dtpsy_1740 glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein
YP_004234596.1	TIGRFAM: Glycine cleavage system T protein; KEGG: pna:Pnap_2683 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel
YP_004234597.1	KEGG: dia:Dtpsy_1745 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004234598.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1748 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234599.1	PFAM: ABC transporter permease; KEGG: dia:Dtpsy_1749 inner-membrane translocator
YP_004234600.1	PFAM: ABC transporter substrate binding protein; KEGG: dia:Dtpsy_1750 protein of unknown function DUF534
YP_004234601.1	KEGG: avi:Avi_3412 PEP phosphonomutase protein; TIGRFAM: Phosphoenolpyruvate phosphomutase, core
YP_004234602.1	TIGRFAM: Phosphonopyruvate decarboxylase; KEGG: avi:Avi_3414 phosphonopyruvate decarboxylase protein; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
YP_004234603.1	KEGG: pfo:Pfl01_5356 hypothetical protein
YP_004234604.1	PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: chy:CHY_2584 nucleotidyl transferase
YP_004234605.1	TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: mlo:mlr5888 asparagine synthetase; PFAM: Asparagine synthase
YP_004234606.1	PFAM: Aldehyde dehydrogenase domain; manually curated; KEGG: vei:Veis_1097 aldehyde dehydrogenase; TIGRFAM: Putative phosphonoacetaldehyde dehydrogenase
YP_004234607.1	PFAM: Protein of unknown function DUF81; KEGG: alv:Alvin_0761 protein of unknown function DUF81
YP_004234608.1	KEGG: sgr:SGR_6359 hypothetical protein
YP_004234609.1	PFAM: Ribosomal RNA adenine methylase transferase; KEGG: ava:Ava_3359 hypothetical protein
YP_004234610.1	PFAM: Metallo-dependent phosphatase; KEGG: vap:Vapar_5903 metallophosphoesterase
YP_004234611.1	KEGG: dia:Dtpsy_1751 electron-transferring-flavoprotein dehydrogenase; PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase
YP_004234612.1	KEGG: vei:Veis_3982 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234613.1	PFAM: Drug/metabolite transporter; KEGG: pna:Pnap_2678 hypothetical protein
YP_004234614.1	KEGG: xcb:XC_4037 catalase precursor; PFAM: Catalase-related subgroup; Catalase-related immune responsive
YP_004234615.1	PFAM: Ankyrin repeat; KEGG: xal:XALc_2990 hypothetical secreted protein
YP_004234616.1	PFAM: Uncharacterised conserved protein UCP07580; KEGG: vap:Vapar_2354 hypothetical protein
YP_004234617.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_1359 TetR family transcriptional regulator
YP_004234618.1	PFAM: ThiJ/PfpI; KEGG: fbl:Fbal_3177 ThiJ/PfpI domain protein
YP_004234619.1	PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: hch:HCH_03584 putative multicopper oxidases
YP_004234620.1	KEGG: ajs:Ajs_1956 uncharacterized peroxidase-related enzyme; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004234621.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004234622.1	KEGG: dac:Daci_4281 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004234623.1	KEGG: dac:Daci_4280 hypothetical protein
YP_004234624.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4279 amidohydrolase 2
YP_004234625.1	KEGG: dac:Daci_4278 hypothetical protein
YP_004234626.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: dac:Daci_4277 dimethylmenaquinone methyltransferase
YP_004234627.1	KEGG: dac:Daci_4276 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004234628.1	KEGG: dac:Daci_4275 hypothetical protein
YP_004234629.1	KEGG: dac:Daci_4274 hypothetical protein
YP_004234630.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_4273 amidohydrolase 2
YP_004234631.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: dac:Daci_4272 SMP-30/gluconolaconase/LRE domain-containing protein
YP_004234632.1	TIGRFAM: Catalase-peroxidase haem; KEGG: bxe:Bxe_A0772 haem catalase/peroxidase; PFAM: Haem peroxidase, plant/fungal/bacterial
YP_004234633.1	PFAM: Protein of unknown function DUF945; KEGG: dac:Daci_4282 hypothetical protein
YP_004234634.1	KEGG: ajs:Ajs_1959 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region
YP_004234635.1	KEGG: pfs:PFLU2243 hypothetical protein
YP_004234636.1	TIGRFAM: PAS; PFAM: Transcription regulator LuxR, C-terminal; PAS fold; KEGG: dia:Dtpsy_1761 transcriptional regulator, LuxR family; SMART: Transcription regulator LuxR, C-terminal; PAS; PAC motif
YP_004234637.1	SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: pna:Pnap_2658 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase
YP_004234638.1	SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: dac:Daci_4265 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase
YP_004234639.1	KEGG: ajs:Ajs_1759 putative CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004234640.1	PFAM: Protein of unknown function DUF482; KEGG: vap:Vapar_2359 protein of unknown function DUF482
YP_004234641.1	TIGRFAM: NAD synthase; KEGG: ajs:Ajs_1761 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004234642.1	KEGG: dia:Dtpsy_1960 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII
YP_004234643.1	KEGG: dia:Dtpsy_1959 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG
YP_004234644.1	PFAM: Diacylglycerol kinase, prokaryotic; KEGG: vap:Vapar_2363 diacylglycerol kinase
YP_004234645.1	PFAM: RDD; KEGG: dia:Dtpsy_1957 RDD domain containing protein
YP_004234646.1	KEGG: ajs:Ajs_1766 putative transmembrane protein
YP_004234647.1	PFAM: Protein of unknown function DUF3619; KEGG: dia:Dtpsy_1955 putative transmembrane protein
YP_004234648.1	KEGG: xtr:100485812 RNA polymerase sigma-E factor-like; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2
YP_004234650.1	TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: ajs:Ajs_1769 acetolactate synthase 3 catalytic subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain
YP_004234651.1	KEGG: dac:Daci_4866 acetolactate synthase 3 regulatory subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT
YP_004234652.1	TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: dia:Dtpsy_1951 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal
YP_004234653.1	KEGG: vei:Veis_1753 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase
YP_004234654.1	SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; KEGG: ajs:Ajs_1774 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
YP_004234655.1	PFAM: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal; KEGG: ajs:Ajs_1775 murein-dd-endopeptidase
YP_004234656.1	KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004234657.1	PFAM: Arginine-tRNA-protein transferase, C-terminal; Arginine-tRNA-protein transferase, N-terminal; KEGG: dia:Dtpsy_1787 arginyl-tRNA-protein transferase
YP_004234658.1	TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; KEGG: ajs:Ajs_1988 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase
YP_004234659.1	PFAM: Protein of unknown function DUF454; KEGG: dia:Dtpsy_1578 protein of unknown function DUF454
YP_004234660.1	TIGRFAM: Formylmethionine deformylase; KEGG: dia:Dtpsy_1579 peptide deformylase; PFAM: Formylmethionine deformylase
YP_004234661.1	SMART: Metal-dependent phosphohydrolase, HD domain; TIGRFAM: Protein-PII uridylyltransferase; KEGG: dia:Dtpsy_1580 PII uridylyl-transferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyl transferase domain; Metal-dependent phosphohydrolase, HD subdomain
YP_004234662.1	TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: dia:Dtpsy_1581 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain
YP_004234663.1	PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; TIGRFAM: Phosphoribosylformylglycinamidine synthase; HAMAP: Phosphoribosylformylglycinamidine synthase, bacterial; KEGG: dac:Daci_4851 phosphoribosylformylglycinamidine synthase
YP_004234664.1	manually curated; KEGG: vap:Vapar_2996 N-acetylmuramoyl-L-alanine amidase
YP_004234665.1	KEGG: dac:Daci_3849 hypothetical protein
YP_004234666.1	KEGG: dac:Daci_4396 diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: Diguanylate phosphodiesterase, EAL domain; GAF; Diguanylate cyclase, predicted; SMART: Diguanylate phosphodiesterase, EAL domain; GAF
YP_004234667.1	PFAM: Protein of unknown function DUF808; KEGG: dac:Daci_4843 hypothetical protein
YP_004234668.1	PFAM: Outer membrane protein, OmpW; KEGG: pol:Bpro_0280 OmpW
YP_004234669.1	KEGG: lch:Lcho_4371 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234670.1	PFAM: Protein of unknown function DUF457, transmembrane; KEGG: mpt:Mpe_A2186 hypothetical protein
YP_004234671.1	KEGG: dia:Dtpsy_1586 methyltransferase; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260
YP_004234672.1	KEGG: dia:Dtpsy_1587 protein of unknown function DUF323; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor
YP_004234673.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: dia:Dtpsy_1588 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004234674.1	KEGG: cja:CJA_2166 TPR domain protein
YP_004234675.1	KEGG: mxa:MXAN_5804 DnaK family protein
YP_004234676.1	PFAM: Peptidase U32; Peptidase U32, collagenase; KEGG: dac:Daci_4811 peptidase U32
YP_004234677.1	KEGG: xac:XAC0601 hypothetical protein
YP_004234678.1	PFAM: Extracellular ligand-binding receptor; KEGG: pna:Pnap_3860 extracellular ligand-binding receptor
YP_004234679.1	KEGG: dia:Dtpsy_1591 hypothetical protein
YP_004234680.1	PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: vei:Veis_2620 CMP/dCMP deaminase, zinc-binding
YP_004234681.1	KEGG: dia:Dtpsy_1593 muramoyltetrapeptide carboxypeptidase; PFAM: Peptidase S66, LD-carboxypeptidase A
YP_004234682.1	KEGG: rfr:Rfer_2284 putative adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated (FHA) domain; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase; Forkhead-associated (FHA) domain
YP_004234683.1	PFAM: Peptidase S45, penicillin amidase; KEGG: dia:Dtpsy_1594 peptidase S45 penicillin amidase
YP_004234684.1	KEGG: vei:Veis_4306 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004234685.1	PFAM: Aminoglycoside phosphotransferase; KEGG: ctt:CtCNB1_2981 aminoglycoside phosphotransferase
YP_004234686.1	KEGG: ajs:Ajs_1779 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004234687.1	PFAM: Crotonase, core; KEGG: vap:Vapar_2631 enoyl-CoA hydratase
YP_004234688.1	KEGG: ajs:Ajs_1781 3-hydroxy-acyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004234689.1	KEGG: dia:Dtpsy_1940 hypothetical protein
YP_004234690.1	TIGRFAM: Thiamine monophosphate synthase; KEGG: dia:Dtpsy_1939 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase
YP_004234691.1	PFAM: Thiazole biosynthesis; KEGG: dia:Dtpsy_1938 thiazole synthase
YP_004234692.1	KEGG: vei:Veis_4313 thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS
YP_004234693.1	PFAM: FAD dependent oxidoreductase; KEGG: dia:Dtpsy_1936 FAD dependent oxidoreductase
YP_004234694.1	TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: ajs:Ajs_1787 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1
YP_004234695.1	PFAM: Serine/threonine-protein kinase-like domain; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: dac:Daci_4365 serine/threonine protein kinase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase
YP_004234696.1	TIGRFAM: Conserved hypothetical protein CHP03759, BMA0021 family; KEGG: dac:Daci_4366 hypothetical protein
YP_004234697.1	KEGG: dac:Daci_4367 polyketide biosynthesis O-methyltransferase-like protein
YP_004234698.1	KEGG: xcv:XCV4429 hypothetical protein
YP_004234699.1	manually curated; KEGG: xcv:XCV4428 putative avirulence protein AvrRxo1
YP_004234700.1	KEGG: dac:Daci_4368 hypothetical protein; TIGRFAM: Bacteriocin biosynthesis, cyclodehydratase; PFAM: YcaO-like
YP_004234701.1	KEGG: dac:Daci_4369 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain
YP_004234702.1	KEGG: dac:Daci_4370 hypothetical protein
YP_004234703.1	KEGG: dia:Dtpsy_1933 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004234704.1	PFAM: Ferredoxin, C-terminal; KEGG: dia:Dtpsy_1932 4Fe-4S ferredoxin iron-sulfur binding domain protein
YP_004234705.1	TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: dia:Dtpsy_1931 sulfate adenylyltransferase, large subunit; PFAM: Protein synthesis factor, GTP-binding
YP_004234706.1	KEGG: ajs:Ajs_1792 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase
YP_004234707.1	PFAM: Uncharacterised conserved protein UCP030820; KEGG: dac:Daci_4653 hypothetical protein
YP_004234708.1	KEGG: dac:Daci_4652 nitrite/sulfite reductase hemoprotein beta subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004234709.1	PFAM: Protein of unknown function DUF81; KEGG: rfr:Rfer_2455 hypothetical protein
YP_004234710.1	PFAM: Major facilitator superfamily MFS-1; KEGG: rsa:RSal33209_2648 NapC
YP_004234711.1	KEGG: bav:BAV2244 acetyltransferase
YP_004234712.1	KEGG: dia:Dtpsy_1926 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal; PFAM: Domain of unknown function DUF752; FAD dependent oxidoreductase
YP_004234713.1	PFAM: Fe(II) trafficking protein YggX; KEGG: vei:Veis_1222 hypothetical protein
YP_004234714.1	KEGG: vap:Vapar_2981 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; Twin-arginine translocation pathway, signal sequence; PFAM: Bacterial extracellular solute-binding, family 1
YP_004234715.1	KEGG: rfr:Rfer_1780 NADPH-dependent FMN reductase; TIGRFAM: NADPH-dependent FMN reductase, SsuE; PFAM: NADPH-dependent FMN reductase
YP_004234716.1	KEGG: dac:Daci_4640 aliphatic sulfonate ABC transporter periplasmic ligand-binding protein; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulphonates; Twin-arginine translocation pathway, signal sequence; SMART: Extracellular solute-binding protein, family 3
YP_004234717.1	KEGG: pan:PODANSg8828 hypothetical protein
YP_004234718.1	TIGRFAM: Alkanesulphonate monooxygenase, FMN-dependent; KEGG: dac:Daci_4638 alkanesulfonate monooxygenase; PFAM: Luciferase-like, subgroup
YP_004234719.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atu:Atu0677 hypothetical protein
YP_004234720.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: ctt:CtCNB1_3071 ABC-transporter membrane subunit
YP_004234721.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4636 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234722.1	KEGG: ctt:CtCNB1_3068 molybdenum-pterin binding protein; TIGRFAM: Molybdenum-pterin binding; PFAM: Transport-associated OB, type 1
YP_004234723.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5610 LysR family transcriptional regulator
YP_004234724.1	KEGG: vap:Vapar_3888 cytochrome c class I; manually curated; PFAM: Cytochrome c, class I
YP_004234725.1	KEGG: dac:Daci_4221 hypothetical protein
YP_004234726.1	KEGG: vap:Vapar_1736 hypothetical protein
YP_004234727.1	TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: dia:Dtpsy_1779 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD
YP_004234728.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: vei:Veis_1671 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004234729.1	KEGG: dia:Dtpsy_1781 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase
YP_004234730.1	TIGRFAM: Glutamyl-Q tRNA(Asp) synthetase; KEGG: dia:Dtpsy_1782 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
YP_004234731.1	PFAM: Amine oxidase; KEGG: dia:Dtpsy_1783 FAD dependent oxidoreductase
YP_004234732.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1784 transcriptional regulator, LysR family
YP_004234733.1	PFAM: Pirin, N-terminal; KEGG: ajs:Ajs_1985 pirin domain-containing protein
YP_004234734.1	PFAM: NADPH-dependent FMN reductase; KEGG: pct:PC1_3424 flavodoxin/nitric oxide synthase
YP_004234735.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: dia:Dtpsy_1596 pirin domain protein
YP_004234736.1	KEGG: dac:Daci_4043 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004234737.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: dia:Dtpsy_1597 cobyrinic acid ac-diamide synthase
YP_004234738.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_1598 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004234739.1	PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dia:Dtpsy_1599 sulphate transporter
YP_004234740.1	PFAM: Transport-associated; KEGG: dia:Dtpsy_1600 transport-associated
YP_004234741.1	KEGG: dia:Dtpsy_1601 Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004234742.1	KEGG: rfr:Rfer_2230 hypothetical protein
YP_004234743.1	KEGG: dia:Dtpsy_1603 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL
YP_004234744.1	PFAM: ABC transporter-like; KEGG: vap:Vapar_2206 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234745.1	TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: dac:Daci_4032 RNA methyltransferase; SMART: RNA 2-O ribose methyltransferase, substrate binding
YP_004234746.1	PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; KEGG: dia:Dtpsy_1612 silent information regulator protein Sir2
YP_004234747.1	KEGG: ajs:Ajs_2261 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB
YP_004234748.1	PFAM: NADP-dependent oxidoreductase domain; KEGG: vap:Vapar_2213 aldo/keto reductase
YP_004234749.1	PFAM: Chromate transporter; KEGG: dia:Dtpsy_1614 chromate transporter
YP_004234750.1	PFAM: Chromate transporter; KEGG: dia:Dtpsy_1615 chromate transporter
YP_004234751.1	KEGG: bgl:bglu_1g04240 peptidase M24; PFAM: Peptidase M24, structural domain; Creatinase
YP_004234752.1	KEGG: bgl:bglu_1g28300 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal
YP_004234753.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: azo:azo2332 putative biopolymer transport protein ExbD
YP_004234754.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpy:Bphyt_1442 biopolymer transport protein ExbD/TolR
YP_004234755.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: rce:RC1_0681 biopolymer transport ExbB protein
YP_004234756.1	KEGG: azo:azo2329 periplasmic biopolymer transport protein linking inner and outer membranes; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004234757.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: xal:XALc_2730 probable cysteine synthase protein
YP_004234758.1	KEGG: mch:Mchl_0345 peptidase S9 prolyl oligopeptidase active site domain protein
YP_004234759.1	KEGG: hse:Hsero_2826 thioredoxin 1; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004234760.1	KEGG: pct:PC1_1153 ABC transporter domain protein; PFAM: ABC transporter, N-terminal; ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004234761.1	KEGG: bgl:bglu_1p1340 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug
YP_004234762.1	KEGG: hse:Hsero_2824 transcription regulator protein; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004234763.1	KEGG: dia:Dtpsy_2074 histidine kinase; PFAM: Two-component sensor kinase N-terminal; ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234764.1	KEGG: ajs:Ajs_1641 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004234765.1	KEGG: dia:Dtpsy_2072 hypothetical protein
YP_004234766.1	KEGG: dac:Daci_2519 hypothetical protein
YP_004234767.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: dac:Daci_2520 hypothetical protein
YP_004234768.1	PFAM: PepSY-associated TM helix; KEGG: dia:Dtpsy_2069 PepSY-associated TM helix domain protein
YP_004234769.1	KEGG: dia:Dtpsy_2068 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004234770.1	KEGG: vap:Vapar_1124 hypothetical protein
YP_004234771.1	KEGG: ctt:CtCNB1_1224 putative D--3-hydroxybutyrate oligomer hydrolase; PFAM: D-(-)-3-hydroxybutyrate oligomer hydrolase, putative
YP_004234772.1	KEGG: dac:Daci_3740 hypothetical protein
YP_004234773.1	PFAM: Calcium/calmodulin-dependent protein kinase II, association-domain; KEGG: vap:Vapar_5447 calcium/calmodulin dependent protein kinase II association-domain protein
YP_004234774.1	KEGG: rsl:RPSI07_mp1421 DNA-binding response regulator in two-component system; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004234775.1	KEGG: rsl:RPSI07_mp1420 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004234776.1	TIGRFAM: Ferrochelatase; KEGG: ajs:Ajs_1652 ferrochelatase; PFAM: Ferrochelatase
YP_004234777.1	KEGG: ajs:Ajs_1653 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase
YP_004234778.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: ajs:Ajs_1655 alpha/beta hydrolase fold
YP_004234779.1	TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: ajs:Ajs_1656 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004234780.1	KEGG: dia:Dtpsy_2047 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004234781.1	TIGRFAM: Chorismate synthase; KEGG: ajs:Ajs_1658 chorismate synthase; PFAM: Chorismate synthase
YP_004234782.1	KEGG: dac:Daci_2039 hypothetical protein
YP_004234783.1	KEGG: dia:Dtpsy_2045 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone
YP_004234784.1	KEGG: dia:Dtpsy_2044 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004234785.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ajs:Ajs_1661 lytic transglycosylase, catalytic
YP_004234786.1	PFAM: Protein of unknown function DUF748; KEGG: dia:Dtpsy_2042 protein of unknown function DUF748
YP_004234787.1	PFAM: Protein of unknown function DUF349; KEGG: ajs:Ajs_1663 hypothetical protein
YP_004234788.1	TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; KEGG: vei:Veis_1425 ribonuclease R; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1
YP_004234789.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_1241 short-chain dehydrogenase/reductase SDR
YP_004234790.1	KEGG: ajs:Ajs_3682 hypothetical protein
YP_004234791.1	TIGRFAM: Glycogen/starch synthases, ADP-glucose type; KEGG: azo:azo1801 putative glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1
YP_004234792.1	TIGRFAM: Malto-oligosyltrehalose synthase; Glycoside hydrolase, family 77; KEGG: azo:azo1799 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; PFAM: Glycoside hydrolase, family 77; Glycosyl hydrolase, family 13, catalytic domain
YP_004234793.1	TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: tbd:Tbd_1173 alpha amylase domain-containing protein; PFAM: Malto-oligosyltrehalose trehalohydrolase, bacterial, C-terminal; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain
YP_004234794.1	TIGRFAM: Glycogen debranching enzyme; KEGG: chl:Chy400_3355 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain
YP_004234795.1	KEGG: eba:ebA6921 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase
YP_004234796.1	KEGG: ade:Adeh_2942 periplasmic sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004234797.1	KEGG: hse:Hsero_2492 light-regulated signal transduction histidine kinase; PFAM: Phytochrome, central region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; PAS fold-2; GAF; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF
YP_004234798.1	PFAM: Haem oxygenase-like; KEGG: bgl:bglu_2g18680 heme oxygenase
YP_004234799.1	KEGG: rlt:Rleg2_1658 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF
YP_004234800.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dac:Daci_4406 multi-sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234801.1	KEGG: dac:Daci_4407 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004234802.1	KEGG: dac:Daci_4408 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATPase-like, ATP-binding domain; Sporulation stage II, protein E C-terminal; SMART: ATPase-like, ATP-binding domain; Protein phosphatase 2C-like
YP_004234803.1	PFAM: ATPase-like, ATP-binding domain; KEGG: reu:Reut_B4972 ATP-binding region, ATPase-like
YP_004234804.1	KEGG: dac:Daci_4410 anti-sigma-factor antagonist
YP_004234805.1	PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dac:Daci_4411 anti-sigma-factor antagonist
YP_004234806.1	KEGG: vap:Vapar_0154 extracellular solute-binding protein, family 3
YP_004234807.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_0146 binding-protein-dependent transport systems inner membrane component
YP_004234808.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0147 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234809.1	TIGRFAM: Histidine utilization repressor; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; KEGG: vei:Veis_3644 histidine utilization repressor; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR
YP_004234810.1	TIGRFAM: Histidine ammonia-lyase; KEGG: dac:Daci_0149 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase
YP_004234811.1	TIGRFAM: Urocanase; KEGG: dac:Daci_0150 urocanate hydratase; PFAM: Urocanase
YP_004234812.1	PFAM: Phytanoyl-CoA dioxygenase; KEGG: pol:Bpro_1037 phytanoyl-CoA dioxygenase
YP_004234813.1	PFAM: Uncharacterised protein family HutD; KEGG: dac:Daci_0151 hypothetical protein
YP_004234814.1	TIGRFAM: Imidazolonepropionase; KEGG: pol:Bpro_1035 imidazolonepropionase; PFAM: Amidohydrolase 3
YP_004234815.1	KEGG: pol:Bpro_1034 N-formimino-L-glutamate deiminase; TIGRFAM: Formiminoglutamate deiminase; PFAM: Amidohydrolase 1
YP_004234816.1	KEGG: dac:Daci_0156 N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate deformylase; PFAM: N-formylglutamate amidohydrolase
YP_004234817.1	PFAM: Drug/metabolite transporter; KEGG: pna:Pnap_4738 hypothetical protein
YP_004234818.1	TIGRFAM: Autotransporter-associated beta strand repeat; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: bgl:bglu_2g04290 probable lipoprotein; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004234819.1	manually curated; KEGG: ajs:Ajs_1667 hypothetical protein
YP_004234820.1	TIGRFAM: Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase; KEGG: dia:Dtpsy_2036 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related
YP_004234821.1	KEGG: dia:Dtpsy_2034 translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type
YP_004234822.1	manually curated; KEGG: ank:AnaeK_0074 lipolytic protein G-D-S-L family
YP_004234823.1	PFAM: Protein of unknown function DUF1624; KEGG: ajs:Ajs_1672 hypothetical protein
YP_004234824.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_2031 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004234825.1	PFAM: BolA protein; KEGG: dac:Daci_3299 BolA family protein
YP_004234826.1	KEGG: dac:Daci_3300 intracellular septation protein A; TIGRFAM: Intracellular septation protein A; PFAM: Intracellular septation protein A
YP_004234827.1	TIGRFAM: Methionine sulphoxide reductase B; KEGG: dia:Dtpsy_2028 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B
YP_004234828.1	PFAM: Uncharacterised protein family UPF0061; KEGG: ajs:Ajs_1677 hypothetical protein
YP_004234829.1	KEGG: dia:Dtpsy_2026 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase/ligase
YP_004234830.1	PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_2025 extracellular ligand-binding receptor
YP_004234831.1	PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2024 inner-membrane translocator
YP_004234832.1	PFAM: ABC transporter permease; KEGG: ajs:Ajs_1681 inner-membrane translocator
YP_004234833.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2022 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234834.1	KEGG: dac:Daci_3312 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004234835.1	KEGG: dac:Daci_3040 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like; Cystathionine beta-synthase, core
YP_004234836.1	KEGG: dac:Daci_3039 hypothetical protein
YP_004234837.1	PFAM: Domain of unknown function DUF1987; KEGG: dac:Daci_3038 putative lipoprotein
YP_004234838.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_3037 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004234839.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; Protein of unknown function DUF3369; KEGG: dac:Daci_3036 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted
YP_004234840.1	PFAM: Glycoside hydrolase, family 5; KEGG: xac:XAC0346 degenerated cellulase
YP_004234841.1	KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core
YP_004234842.1	TIGRFAM: Thiolase; KEGG: dia:Dtpsy_2019 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004234843.1	KEGG: cti:RALTA_A1470 putative thioesterase; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004234844.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, N-terminal, bacteria; KEGG: dac:Daci_3315 acyl-CoA dehydrogenase domain-containing protein
YP_004234845.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_2008 gluconate 5-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR
YP_004234846.1	KEGG: ctt:CtCNB1_2703 hypothetical protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004234847.1	KEGG: dia:Dtpsy_2006 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal
YP_004234848.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ajs:Ajs_1698 GCN5-related N-acetyltransferase
YP_004234849.1	PFAM: Glutathione S-transferase, C-terminal; KEGG: ajs:Ajs_1699 putative glutathione S-transferase-related protein
YP_004234850.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: vap:Vapar_2914 hypothetical protein
YP_004234851.1	KEGG: dia:Dtpsy_2108 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004234852.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: ajs:Ajs_1607 extracellular solute-binding protein
YP_004234853.1	KEGG: ctt:CtCNB1_3035 SWIB/Mdm2; PFAM: SWIB/MDM2 domain; SMART: SWIB domain
YP_004234854.1	PFAM: Drug/metabolite transporter; KEGG: pol:Bpro_2810 hypothetical protein
YP_004234855.1	KEGG: pol:Bpro_2809 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type
YP_004234856.1	PFAM: Drug/metabolite transporter; KEGG: dia:Dtpsy_1446 protein of unknown function DUF6 transmembrane
YP_004234857.1	PFAM: AIG2-like; KEGG: pol:Bpro_2100 hypothetical protein
YP_004234858.1	TIGRFAM: Isocitrate lyase; KEGG: dar:Daro_3098 isocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004234859.1	TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; KEGG: vap:Vapar_1870 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD
YP_004234860.1	KEGG: dia:Dtpsy_1449 translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal
YP_004234861.1	KEGG: pol:Bpro_2104 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; PFAM: Ribosomal protein L35
YP_004234862.1	KEGG: ajs:Ajs_2397 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20
YP_004234863.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; KEGG: dac:Daci_4612 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal
YP_004234864.1	TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: dac:Daci_4611 phenylalanyl-tRNA synthetase subunit beta
YP_004234865.1	KEGG: vei:Veis_3095 integration host factor subunit alpha; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein
YP_004234866.1	KEGG: vei:Veis_3096 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004234867.1	KEGG: pna:Pnap_2175 hypothetical protein
YP_004234868.1	KEGG: ang:An13g00210 hypothetical protein
YP_004234869.1	KEGG: xcv:XCV4246 putative acetyltransferase
YP_004234870.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_1666 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004234871.1	PFAM: Arsenical pump membrane protein; KEGG: xal:XALc_2149 hypothetical protein
YP_004234872.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; CHASE; Diguanylate cyclase, predicted; PAS fold-3; KEGG: ajs:Ajs_2088 diguanylate cyclase/phosphodiesterase with PAS/PAC and CHASE sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004234873.1	PFAM: Uncharacterised protein family UPF0060; KEGG: ajs:Ajs_2087 hypothetical protein
YP_004234874.1	PFAM: Lipase, class 3; KEGG: rsl:RPSI07_mp0618 putative type III effector, lipase domain
YP_004234875.1	TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge; KEGG: dia:Dtpsy_1669 chromosome segregation protein SMC; SMART: SMCs flexible hinge
YP_004234876.1	SMART: ZipA, C-terminal FtsZ-binding domain; KEGG: dia:Dtpsy_1670 ZipA FtsZ-binding region
YP_004234877.1	TIGRFAM: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; NAD-dependent DNA ligase, OB-fold; KEGG: ajs:Ajs_2083 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT
YP_004234878.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Protein of unknown function DUF2345
YP_004234879.1	KEGG: bur:Bcep18194_B0647 hypothetical protein
YP_004234880.1	KEGG: bmj:BMULJ_06209 rhs family protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat; PAAR motif
YP_004234881.1	KEGG: hvo:HVO_1241 regulatory protein PrrC
YP_004234882.1	KEGG: pwa:Pecwa_3002 thiamine pyrophosphate protein domain protein TPP-binding protein
YP_004234883.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004234884.1	KEGG: dac:Daci_4553 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004234885.1	KEGG: dia:Dtpsy_0416 hypothetical protein
YP_004234886.1	PFAM: Protein of unknown function DUF55; KEGG: dia:Dtpsy_1663 protein of unknown function DUF55
YP_004234887.1	KEGG: hse:Hsero_4587 superfamily II helicase; PFAM: SNF2-related; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004234888.1	KEGG: pol:Bpro_1991 hypothetical protein
YP_004234889.1	KEGG: dac:Daci_3969 transglycosylase-associated protein
YP_004234890.1	PFAM: NLP/P60; KEGG: dia:Dtpsy_1664 NLP/P60 protein
YP_004234891.1	KEGG: ajs:Ajs_2014 glucose sorbosone dehydrogenase
YP_004234892.1	PFAM: Isochorismatase-like; KEGG: dia:Dtpsy_1824 isochorismatase hydrolase
YP_004234893.1	TIGRFAM: Propionate--CoA ligase; KEGG: dia:Dtpsy_1825 propionyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004234894.1	KEGG: dsh:Dshi_1000 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004234895.1	KEGG: dac:Daci_4269 hypothetical protein
YP_004234896.1	KEGG: dac:Daci_4270 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; FAD-dependent pyridine nucleotide-disulphide oxidoreductase
YP_004234897.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pfl:PFL_2966 TetR family transcriptional regulator
YP_004234898.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; PAS fold; Diguanylate cyclase, predicted; PAS fold-3; KEGG: dia:Dtpsy_1826 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004234899.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_2018 hypothetical protein
YP_004234900.1	KEGG: dia:Dtpsy_1828 methylated-DNA/protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
YP_004234901.1	KEGG: ajs:Ajs_2020 DNA-O6-methylguanine--protein-cysteine S-methyltransferase / DNA-3-methyladenine glycosylase II / transcriptional regulator Ada; PFAM: Ada DNA repair, metal-binding; HhH-GPD domain; HTH transcriptional regulator, AraC; AlkA, N-terminal; SMART: Helix-turn-helix, AraC type, DNA binding domain; HhH-GPD domain
YP_004234902.1	KEGG: ajs:Ajs_2021 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal
YP_004234903.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pfs:PFLU2185 putative hydrolase
YP_004234904.1	PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; KEGG: dia:Dtpsy_1831 3-deoxy-D-manno-octulosonic-acid transferase domain protein
YP_004234905.1	KEGG: hse:Hsero_0936 quinohemoprotein alcohol dehydrogenase
YP_004234906.1	KEGG: reh:H16_B1102 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase
YP_004234907.1	KEGG: rha:RHA1_ro00358 phenylacetaldoxime dehydratase
YP_004234908.1	KEGG: bcm:Bcenmc03_3235 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
YP_004234909.1	KEGG: ppf:Pput_2729 nitrile hydratase
YP_004234910.1	TIGRFAM: Nitrile hydratase, alpha subunit; KEGG: bac:BamMC406_6258 nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase, alpha subunit/Thiocyanate hydrolase, gamma subunit
YP_004234911.1	PFAM: Amidase; KEGG: dac:Daci_5308 amidase
YP_004234912.1	KEGG: hse:Hsero_0928 nitrilase regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004234913.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dia:Dtpsy_1832 GCN5-related N-acetyltransferase
YP_004234914.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: xcv:XCV1196 putative serine/threonine protein kinase
YP_004234915.1	KEGG: dia:Dtpsy_1835 type I secretion outer membrane protein, TolC family; TIGRFAM: Type I secretion outer membrane protein, TolC; PFAM: Outer membrane efflux protein
YP_004234916.1	KEGG: dia:Dtpsy_1836 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004234917.1	KEGG: dia:Dtpsy_1837 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_004234918.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dia:Dtpsy_1838 transcriptional regulator, TetR family
YP_004234919.1	TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: dia:Dtpsy_1839 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA
YP_004234920.1	PFAM: Ferric-uptake regulator; KEGG: dac:Daci_3951 ferric uptake regulator family protein
YP_004234921.1	KEGG: pna:Pnap_1146 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004234922.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: pol:Bpro_1679 hypothetical protein
YP_004234923.1	KEGG: pna:Pnap_1148 hypothetical protein
YP_004234924.1	manually curated; KEGG: pol:Bpro_1681 hypothetical protein
YP_004234925.1	KEGG: dia:Dtpsy_1841 hypothetical protein
YP_004234926.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: vap:Vapar_3717 TonB-dependent receptor
YP_004234927.1	PFAM: FAD dependent oxidoreductase; KEGG: bvi:Bcep1808_6410 FAD dependent oxidoreductase
YP_004234928.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gdi:GDI_0417 putative acetyl transferase
YP_004234929.1	PFAM: FAD dependent oxidoreductase; KEGG: bge:BC1002_4534 FAD dependent oxidoreductase
YP_004234930.1	PFAM: Aldehyde dehydrogenase domain; KEGG: vap:Vapar_1651 aldehyde dehydrogenase (NAD(+))
YP_004234931.1	KEGG: tin:Tint_0735 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_004234932.1	PFAM: Auxin efflux carrier; KEGG: dac:Daci_3945 auxin efflux carrier
YP_004234933.1	KEGG: rpf:Rpic12D_4034 peptidase dimerisation domain protein; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004234934.1	TIGRFAM: Pyridoxamine 5'-phosphate oxidase; KEGG: dac:Daci_3944 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal
YP_004234935.1	KEGG: pst:PSPTO_0876 type III effector HopD1
YP_004234936.1	PFAM: ChaC-like protein; KEGG: dia:Dtpsy_1879 ChaC family protein
YP_004234937.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Methyl-viologen-reducing hydrogenase, delta subunit; KEGG: dia:Dtpsy_1878 OmpA/MotB domain protein
YP_004234938.1	PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: mmw:Mmwyl1_1864 small integral membrane protein
YP_004234939.1	PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor; KEGG: bam:Bamb_6595 CopG/Arc/MetJ family transcriptional regulator
YP_004234940.1	PFAM: Plasmid stabilisation system; KEGG: bam:Bamb_6594 plasmid stabilization system protein
YP_004234941.1	KEGG: ajs:Ajs_2054 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004234942.1	PFAM: Shikimate kinase; manually curated; KEGG: dia:Dtpsy_1876 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase
YP_004234943.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: ajs:Ajs_2052 tripartite ATP-independent periplasmic transporter DctQ
YP_004234944.1	KEGG: dia:Dtpsy_1874 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004234945.1	KEGG: ajs:Ajs_2050 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004234946.1	TIGRFAM: 6-phosphogluconate dehydratase; KEGG: dia:Dtpsy_1872 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004234947.1	TIGRFAM: KDPG/KHG aldolase; KEGG: ajs:Ajs_2048 2-keto-3-deoxy-phosphogluconate aldolase; PFAM: KDPG/KHG aldolase
YP_004234948.1	KEGG: dac:Daci_4543 hypothetical protein
YP_004234949.1	TIGRFAM: Glyoxalase I; KEGG: dia:Dtpsy_1870 lactoylglutathione lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004234950.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_2046 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR
YP_004234951.1	KEGG: dac:Daci_5864 XRE family transcriptional regulator; PFAM: Protein of unknown function DUF2083,transcriptional regulator; Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3
YP_004234952.1	TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: dac:Daci_5862 methylcitrate synthase; PFAM: Citrate synthase-like
YP_004234953.1	TIGRFAM: 2-methylisocitrate dehydratase AcnD, Fe/S-dependent; KEGG: dia:Dtpsy_2080 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel
YP_004234954.1	KEGG: dia:Dtpsy_2081 AcnD-accessory protein PrpF; TIGRFAM: PrpF, AcnD-accessory; PFAM: PrpF protein
YP_004234955.1	KEGG: dac:Daci_3579 PEP phosphonomutase; PFAM: Isocitrate lyase/phosphorylmutase
YP_004234956.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xca:xccb100_0338 transcriptional regulator, LysR family
YP_004234957.1	PFAM: Protein of unknown function DUF1852; KEGG: dac:Daci_2549 hypothetical protein
YP_004234958.1	PFAM: Methionine synthase, vitamin-B12 independent; KEGG: dac:Daci_2550 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
YP_004234959.1	KEGG: ajs:Ajs_4230 metal dependent phosphohydrolase
YP_004234960.1	PFAM: Integrase, catalytic core, phage; KEGG: rfr:Rfer_2261 phage integrase
YP_004234961.1	PFAM: KfrA, N-terminal DNA-binding domain; KEGG: ctt:CtCNB1_2317 hypothetical protein
YP_004234962.1	KEGG: dia:Dtpsy_1864 hypothetical protein
YP_004234963.1	PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: cli:Clim_1924 peptidase S8/S53 subtilisin kexin sedolisin
YP_004234964.1	KEGG: gob:Gobs_1454 hypothetical protein
YP_004234965.1	KEGG: bac:BamMC406_4814 putative transmembrane protein; PFAM: Coagulation factor 5/8 type, C-terminal; SMART: Fibronectin, type III
YP_004234966.1	KEGG: pna:Pnap_3254 mucin-associated surface protein (MASP)
YP_004234967.1	PFAM: Porin, Gram-negative type; KEGG: pol:Bpro_3679 porin
YP_004234968.1	TIGRFAM: Peptidase S33, tricorn interacting factor 1; KEGG: xcb:XC_1296 proline imino-peptidase; PFAM: Alpha/beta hydrolase fold-1
YP_004234969.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sit:TM1040_2904 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004234970.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_1840 binding-protein-dependent transport systems inner membrane component
YP_004234971.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO1586 putative oligopeptide ABC transporter (permease protein)
YP_004234972.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: jan:Jann_1077 extracellular solute-binding protein
YP_004234973.1	KEGG: met:M446_0668 ABC transporter related; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; SMART: ATPase, AAA+ type, core
YP_004234974.1	PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: oan:Oant_4150 dimethylmenaquinone methyltransferase
YP_004234975.1	KEGG: cyj:Cyan7822_4320 4-hydroxy-2-oxovalerate aldolase; PFAM: Aldehyde-lyase domain
YP_004234976.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004234977.1	KEGG: ddc:Dd586_2919 transcriptional regulator, LuxR family; PFAM: Transcription factor LuxR-like, autoinducer-binding domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal
YP_004234978.1	KEGG: vap:Vapar_1032 hypothetical protein
YP_004234979.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_3510 LysR family transcriptional regulator
YP_004234980.1	KEGG: dac:Daci_3511 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain
YP_004234981.1	KEGG: dac:Daci_3512 hypothetical protein
YP_004234982.1	KEGG: dac:Daci_3513 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004234983.1	PFAM: Amidohydrolase 2; KEGG: dac:Daci_3514 amidohydrolase 2
YP_004234984.1	KEGG: dac:Daci_3515 hypothetical protein
YP_004234985.1	KEGG: dac:Daci_2934 hypothetical protein
YP_004234986.1	PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; KEGG: rlt:Rleg2_3795 acyl-CoA dehydrogenase domain protein
YP_004234987.1	PFAM: Phosphopantetheine-binding; KEGG: bpa:BPP3911 acyl carrier protein
YP_004234988.1	KEGG: bav:BAV2987 D-alanine-D-alanyl carrier protein ligase; PFAM: AMP-dependent synthetase/ligase
YP_004234989.1	KEGG: dac:Daci_2936 cell morphology protein
YP_004234990.1	PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: dac:Daci_2939 membrane bound O-acyl transferase MBOAT family protein
YP_004234991.1	KEGG: dac:Daci_2940 cell morphology protein
YP_004234992.1	KEGG: dac:Daci_2941 hypothetical protein
YP_004234993.1	KEGG: dac:Daci_2942 TPR repeat-containing protein
YP_004234994.1	KEGG: dac:Daci_2943 bacteriophage N4 adsorption protein B
YP_004234995.1	KEGG: dac:Daci_2944 hypothetical protein
YP_004234996.1	TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dac:Daci_2945 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004234997.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: mpt:Mpe_A1036 hypothetical protein
YP_004234998.1	PFAM: Drug/metabolite transporter; KEGG: dac:Daci_1737 hypothetical protein
YP_004234999.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: dia:Dtpsy_1777 pseudouridine synthase
YP_004235000.1	PFAM: AsmA; KEGG: dia:Dtpsy_1774 AsmA family protein
YP_004235001.1	SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: ajs:Ajs_1967 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; Nucleic acid binding, OB-fold, tRNA/helicase-type; PHP, C-terminal
YP_004235002.1	KEGG: ajs:Ajs_1966 hypothetical protein
YP_004235003.1	KEGG: dia:Dtpsy_1765 hypothetical protein
YP_004235004.1	KEGG: dac:Daci_4264 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain
YP_004235005.1	KEGG: dia:Dtpsy_1964 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase
YP_004235006.1	KEGG: bvi:Bcep1808_5171 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235007.1	PFAM: D-aminoacyl-tRNA deacylase; KEGG: bvi:Bcep1808_5170 hypothetical protein
YP_004235008.1	PFAM: Formyl transferase, N-terminal; KEGG: bvi:Bcep1808_5168 formyl transferase domain-containing protein
YP_004235009.1	PFAM: Lyase 1, N-terminal; ATP-grasp fold, DUF201-type; KEGG: bvi:Bcep1808_5167 argininosuccinate lyase
YP_004235010.1	KEGG: bvi:Bcep1808_5166 pyridoxal-5'-phosphate-dependent enzyme, beta subunit; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004235011.1	PFAM: GHMP kinase; KEGG: bvi:Bcep1808_5165 GHMP kinase
YP_004235012.1	TIGRFAM: Pyrophosphate-energised proton pump; KEGG: pna:Pnap_1701 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump
YP_004235013.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: rme:Rmet_3696 peptidase M20
YP_004235014.1	KEGG: ctt:CtCNB1_1644 hypothetical protein
YP_004235015.1	KEGG: dac:Daci_4881 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: HTH transcriptional regulator, Crp; Cyclic nucleotide-binding domain
YP_004235016.1	PFAM: Aldehyde dehydrogenase domain; KEGG: dia:Dtpsy_1966 aldehyde dehydrogenase
YP_004235017.1	PFAM: Zinc/iron permease; KEGG: dac:Daci_2969 zinc/iron permease
YP_004235018.1	PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; KEGG: dac:Daci_2970 superoxide dismutase
YP_004235019.1	KEGG: dac:Daci_3131 gluconate transporter; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter
YP_004235020.1	KEGG: avi:Avi_5261 valyl-tRNA synthetase
YP_004235021.1	PFAM: Tryptophan halogenase; KEGG: azl:AZL_e04110 FAD-binding monooxygenase
YP_004235022.1	KEGG: dac:Daci_4884 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235023.1	KEGG: kla:KLLA0C11517g hypothetical protein
YP_004235024.1	TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: dia:Dtpsy_1969 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB
YP_004235025.1	KEGG: ajs:Ajs_1748 molybdopterin-guanine dinucleotide biosynthesis protein MobA; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004235026.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: mpt:Mpe_A2522 hypothetical protein
YP_004235027.1	TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; MoeA, C-terminal, domain IV; Molybdopterin binding; KEGG: ajs:Ajs_1747 molybdopterin molybdochelatase; SMART: Molybdopterin binding
YP_004235028.1	PFAM: Thioredoxin domain; KEGG: dia:Dtpsy_1972 thioredoxin domain protein
YP_004235029.1	HAMAP: Ribonuclease H; KEGG: dia:Dtpsy_1973 ribonuclease H; PFAM: Ribonuclease H domain
YP_004235030.1	PFAM: Methyltransferase type 11; KEGG: ajs:Ajs_1744 methyltransferase type 11
YP_004235031.1	KEGG: dia:Dtpsy_1975 hydroxyacylglutathione hydrolase; PFAM: Beta-lactamase-like; TIGRFAM: Hydroxyacylglutathione hydrolase; HAMAP: Hydroxyacylglutathione hydrolase; SMART: Beta-lactamase-like
YP_004235032.1	PFAM: Lytic transglycosylase-like, catalytic; MLTD-N; KEGG: dia:Dtpsy_1976 lytic transglycosylase catalytic
YP_004235033.1	PFAM: Protein of unknown function DUF3096; KEGG: dia:Dtpsy_1977 hypothetical protein
YP_004235034.1	KEGG: vei:Veis_0589 putative signal peptide protein
YP_004235035.1	PFAM: Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein; KEGG: ajs:Ajs_2347 membrane protein-like protein
YP_004235036.1	KEGG: ajs:Ajs_2348 recombination protein RecR; TIGRFAM: RecR protein; SMART: Toprim domain; Helix-hairpin-helix DNA-binding motif, class 1
YP_004235037.1	TIGRFAM: Uncharacterised protein family UPF0133; HAMAP: Uncharacterised protein family UPF0133; KEGG: vap:Vapar_2331 hypothetical protein; PFAM: Uncharacterised protein family UPF0133
YP_004235038.1	TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: Shikimate kinase; KEGG: ajs:Ajs_2350 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core
YP_004235039.1	KEGG: vap:Vapar_4188 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235040.1	KEGG: dia:Dtpsy_1505 HI0933 family protein; TIGRFAM: Conserved hyptotheical protein CHP03862, flavoprotein, PP4765; Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like
YP_004235041.1	PFAM: DNA helicase, UvrD/REP type; KEGG: dia:Dtpsy_1503 UvrD/REP helicase
YP_004235042.1	KEGG: dia:Dtpsy_1502 exonuclease-like protein
YP_004235043.1	KEGG: dia:Dtpsy_1501 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004235044.1	TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: vei:Veis_2604 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; Rho termination factor, N-terminal
YP_004235045.1	PFAM: RecF/RecN/SMC; KEGG: avn:Avin_11550 ATP-dependent dsDNA exonuclease SbcC
YP_004235046.1	manually curated; TIGRFAM: Exonuclease SbcD; KEGG: avn:Avin_11540 exonuclease subunit SbcD; PFAM: Metallo-dependent phosphatase
YP_004235047.1	KEGG: vap:Vapar_2320 ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31
YP_004235048.1	KEGG: vei:Veis_0012 putative inner membrane transmembrane protein
YP_004235049.1	KEGG: dia:Dtpsy_1493 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein
YP_004235050.1	TIGRFAM: Signal transduction histidine kinase, phosphate regulon sensor PhoR; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dia:Dtpsy_1492 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS
YP_004235051.1	TIGRFAM: Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; KEGG: dia:Dtpsy_1491 two component transcriptional regulator PhoB, winged helix family; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004235052.1	KEGG: ajs:Ajs_2368 phosphate uptake regulator, PhoU; TIGRFAM: PhoU; PFAM: PhoU
YP_004235053.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: dac:Daci_4915 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-like
YP_004235054.1	KEGG: ajs:Ajs_2370 phosphate transporter permease subunit PtsA; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235055.1	KEGG: dia:Dtpsy_1487 phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235056.1	TIGRFAM: Periplasmic phosphate binding protein; KEGG: ajs:Ajs_2372 phosphate ABC transporter, periplasmic phosphate-binding protein
YP_004235057.1	TIGRFAM: Exopolyphosphatase; KEGG: dia:Dtpsy_1483 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase
YP_004235058.1	KEGG: ajs:Ajs_2376 hypothetical protein
YP_004235059.1	KEGG: ajs:Ajs_2377 phosphohistidine phosphatase, SixA; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004235060.1	TIGRFAM: Polyphosphate kinase; KEGG: dia:Dtpsy_1480 polyphosphate kinase; PFAM: Polyphosphate kinase
YP_004235061.1	manually curated; KEGG: dia:Dtpsy_1479 ornithine-acyl(acyl carrier protein) N-acyltransferase
YP_004235062.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: ajs:Ajs_2380 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004235063.1	TIGRFAM: Phosphoglucosamine mutase; KEGG: dia:Dtpsy_1477 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal
YP_004235064.1	TIGRFAM: Dihydropteroate synthase; KEGG: ajs:Ajs_2382 dihydropteroate synthase; PFAM: Pterin-binding
YP_004235065.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: dia:Dtpsy_1475 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular
YP_004235066.1	PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: dia:Dtpsy_1474 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004235067.1	PFAM: RNA-binding, CRM domain; KEGG: dia:Dtpsy_1473 protein of unknown function UPF0044
YP_004235068.1	KEGG: dac:Daci_4928 hypothetical protein
YP_004235069.1	KEGG: dac:Daci_4929 hypothetical protein
YP_004235070.1	KEGG: dia:Dtpsy_1469 transcription elongation factor GreA; TIGRFAM: Transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal
YP_004235071.1	SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: dia:Dtpsy_1458 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal
YP_004235072.1	TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: dia:Dtpsy_1456 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal
YP_004235073.1	KEGG: pgu:PGUG_01202 hypothetical protein
YP_004235074.1	PFAM: Amino acid permease domain; KEGG: dac:Daci_3739 D-alanine/D-serine/glycine permease
YP_004235075.1	KEGG: rop:ROP_43580 hypothetical protein
YP_004235076.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1814 transcriptional regulator, LysR family
YP_004235077.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004235078.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: ajs:Ajs_2009 methylmalonate-semialdehyde dehydrogenase [acylating]; PFAM: Aldehyde dehydrogenase domain
YP_004235079.1	PFAM: Protein of unknown function DUF1311; KEGG: dia:Dtpsy_1812 protein of unknown function DUF1311
YP_004235080.1	KEGG: dia:Dtpsy_1811 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004235081.1	KEGG: dia:Dtpsy_1810 hypothetical protein
YP_004235082.1	TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; KEGG: vap:Vapar_3253 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding
YP_004235083.1	PFAM: Superoxide dismutase, copper/zinc binding; KEGG: dra:DR_1546 Cu/Zn family superoxide dismutase
YP_004235084.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: reh:H16_B2109 outer membrane receptor, TonB dependent
YP_004235085.1	KEGG: vap:Vapar_1717 hypothetical protein
YP_004235086.1	KEGG: ajs:Ajs_1999 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004235087.1	SMART: SAF domain; TIGRFAM: Galactarate dehydratase; KEGG: vap:Vapar_1721 galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain
YP_004235088.1	KEGG: vap:Vapar_1722 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004235089.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: vap:Vapar_1723 tripartite ATP-independent periplasmic transporter DctQ component
YP_004235090.1	KEGG: vap:Vapar_1724 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004235091.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: vap:Vapar_1725 SMP-30/gluconolaconase/LRE domain protein
YP_004235092.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: pmy:Pmen_3299 NAD-dependent epimerase/dehydratase
YP_004235093.1	KEGG: vap:Vapar_1727 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004235094.1	KEGG: vap:Vapar_1728 hypothetical protein
YP_004235095.1	TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; KEGG: vap:Vapar_1729 5-dehydro-4-deoxyglucarate dehydratase; PFAM: Dihydrodipicolinate synthetase
YP_004235096.1	KEGG: xac:XAC1683 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001
YP_004235097.1	KEGG: xca:xccb100_2594 RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004235098.1	KEGG: xac:XAC1681 hypothetical protein
YP_004235099.1	PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: xcb:XC_2568 serine protease
YP_004235100.1	KEGG: cja:CJA_2614 hypothetical protein
YP_004235101.1	KEGG: bph:Bphy_3623 hypothetical protein
YP_004235102.1	PFAM: Major facilitator superfamily MFS-1; KEGG: hse:Hsero_0278 major facilitator superfamily permease
YP_004235103.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rcu:RCOM_2056130 hypothetical protein
YP_004235104.1	KEGG: ctt:CtCNB1_4715 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235105.1	PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: pol:Bpro_1655 hypothetical protein
YP_004235106.1	PFAM: Histone-like nucleoid-structuring protein H-NS; KEGG: dac:Daci_3717 histone family protein nucleoid-structuring protein H-NS
YP_004235107.1	PFAM: Sulfatase; Domain of unknown function DUF1705; KEGG: pct:PC1_2128 sulfatase
YP_004235108.1	KEGG: pct:PC1_2127 hypothetical protein
YP_004235109.1	KEGG: pct:PC1_2130 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004235110.1	KEGG: pct:PC1_2129 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004235111.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bbt:BBta_2731 putative glyoxalase
YP_004235112.1	PFAM: Domain of unknown function DUF1260; KEGG: acd:AOLE_18875 hypothetical protein
YP_004235113.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1902 major facilitator transporter
YP_004235114.1	SMART: HTH transcriptional regulator, MarR; KEGG: dac:Daci_1901 MarR family transcriptional regulator
YP_004235115.1	KEGG: dac:Daci_1900 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily
YP_004235116.1	TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: vap:Vapar_2649 isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004235117.1	KEGG: pna:Pnap_1929 TolA protein
YP_004235118.1	PFAM: Protein of unknown function DUF192; KEGG: vei:Veis_4888 hypothetical protein
YP_004235119.1	KEGG: dia:Dtpsy_1558 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal
YP_004235120.1	KEGG: ajs:Ajs_2302 exodeoxyribonuclease VII large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004235121.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_1556 MotA/TolQ/ExbB proton channel
YP_004235122.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: xtr:100486403 hypothetical protein LOC100486403
YP_004235123.1	TIGRFAM: Tetraacyldisaccharide 4'-kinase; KEGG: ajs:Ajs_2305 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase
YP_004235124.1	PFAM: Uncharacterised protein family UPF0434/Trm112; KEGG: dia:Dtpsy_1553 protein of unknown function DUF343
YP_004235125.1	PFAM: Acylneuraminate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ajs:Ajs_2307 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_004235126.1	KEGG: ctt:CtCNB1_2834 adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain
YP_004235127.1	PFAM: Asparaginase/glutaminase; KEGG: vei:Veis_4896 asparaginase; SMART: Asparaginase/glutaminase
YP_004235128.1	TIGRFAM: Peptidase S24, LexA repressor; HAMAP: Peptidase S24, LexA repressor; KEGG: dia:Dtpsy_1549 LexA repressor; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region
YP_004235129.1	KEGG: vap:Vapar_2635 hypothetical protein
YP_004235130.1	TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpA type; PFAM: Helicase-associated domain; Helicase, C-terminal; Domain of unknown function DUF1605; KEGG: vei:Veis_0877 ATP-dependent helicase HrpA; SMART: Helicase-associated domain; DEAD-like helicase, N-terminal; ATPase, AAA+ type, core; Helicase, C-terminal
YP_004235131.1	KEGG: pna:Pnap_4092 hypothetical protein
YP_004235132.1	KEGG: vap:Vapar_3676 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004235133.1	KEGG: dia:Dtpsy_1530 N-acetylglutamate synthase; TIGRFAM: Amino-acid N-acetyltransferase (ArgA); PFAM: Aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase (GNAT) domain
YP_004235134.1	KEGG: ajs:Ajs_2328 beta-lactamase; PFAM: Beta-lactamase-related
YP_004235135.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_2329 LysR family transcriptional regulator
YP_004235136.1	KEGG: pol:Bpro_2937 rhodanese-like protein; PFAM: Rhodanese-like; Glutathione S-transferase, C-terminal; SMART: Rhodanese-like
YP_004235137.1	PFAM: Disulphide bond formation protein DsbB/BdbC; KEGG: ajs:Ajs_2334 disulphide bond formation protein DsbB
YP_004235138.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Sulphate transport system permease protein 1; KEGG: dia:Dtpsy_1522 sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter-like
YP_004235139.1	KEGG: ajs:Ajs_2336 sulfate ABC transporter, inner membrane subunit CysW; TIGRFAM: Sulphate ABC transporter, permease protein CysW; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235140.1	KEGG: dac:Daci_4589 sulfate ABC transporter, inner membrane subunit CysT; TIGRFAM: Sulphate ABC transporter, permease protein CysT; Sulphate ABC transporter permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235141.1	KEGG: dia:Dtpsy_1519 sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: Thiosulphate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004235142.1	PFAM: Protein of unknown function DUF1234; KEGG: vap:Vapar_2962 protein of unknown function DUF1234
YP_004235143.1	KEGG: dac:Daci_0745 hypothetical protein
YP_004235144.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1518 transcriptional regulator, LysR family
YP_004235145.1	PFAM: Flavodoxin-like fold; KEGG: ajs:Ajs_2340 (acyl-carrier-protein) phosphodiesterase
YP_004235146.1	PFAM: NADPH-dependent FMN reductase; KEGG: dia:Dtpsy_1516 NADPH-dependent FMN reductase
YP_004235147.1	KEGG: dia:Dtpsy_1515 lipoprotein, YaeC family; TIGRFAM: Lipoprotein YaeC; PFAM: NLPA lipoprotein
YP_004235148.1	KEGG: dia:Dtpsy_2395 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235149.1	PFAM: Lipase, GDSL; KEGG: aca:ACP_0027 GDSL-like lipase/acylhydrolase family protein
YP_004235150.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004235151.1	KEGG: scl:sce7020 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235152.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_1513 binding-protein-dependent transport systems inner membrane component
YP_004235153.1	PFAM: NIL domain; ABC transporter-like; KEGG: dia:Dtpsy_1512 DL-methionine transporter ATP-binding subunit; SMART: NIL domain; ATPase, AAA+ type, core
YP_004235154.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: mrd:Mrad2831_3535 PAS/PAC sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004235155.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_2949 major facilitator transporter
YP_004235156.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2950 LysR family transcriptional regulator
YP_004235157.1	KEGG: epy:EpC_13700 Eop3 protein
YP_004235158.1	KEGG: bgl:bglu_2g10220 type I secretion outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004235159.1	KEGG: alv:Alvin_0946 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004235160.1	KEGG: alv:Alvin_0945 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004235161.1	KEGG: rso:RS05454 two component response regulator transcription regulator protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004235162.1	KEGG: alv:Alvin_0943 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004235163.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ara:Arad_1341 transcriptional regulator protein
YP_004235165.1	KEGG: vap:Vapar_2290 YD repeat protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004235166.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004235167.1	KEGG: dia:Dtpsy_1819 hypothetical protein
YP_004235168.1	KEGG: ajs:Ajs_2524 Ku domain-containing protein; TIGRFAM: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type
YP_004235169.1	KEGG: ajs:Ajs_2523 ATP-dependent DNA ligase; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain; DNA polymerase LigD, ligase domain; DNA ligase D, 3'-phosphoesterase domain; PFAM: DNA ligase, ATP-dependent, C-terminal; DNA ligase, ATP-dependent, central
YP_004235170.1	SMART: Biotin/thiamin synthesis-associated protein; Elongator protein 3/MiaB/NifB; TIGRFAM: Biotin synthase; KEGG: dac:Daci_3779 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM
YP_004235171.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: vap:Vapar_3600 Asp/Glu racemase
YP_004235172.1	KEGG: vap:Vapar_3601 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004235173.1	KEGG: vap:Vapar_3602 hypothetical protein; PFAM: Aminotransferase class-III
YP_004235174.1	PFAM: Helix-turn-helix protein RpiR; Sugar isomerase (SIS); KEGG: vap:Vapar_3603 transcriptional regulator, RpiR family
YP_004235175.1	KEGG: dia:Dtpsy_1854 lactoylglutathione lyase
YP_004235176.1	PFAM: Domain of unknown function DUF218; KEGG: ctt:CtCNB1_2322 hypothetical protein
YP_004235177.1	SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment
YP_004235178.1	PFAM: Domain of unknown function DUF88; KEGG: pif:PITG_03562 hypothetical protein
YP_004235179.1	KEGG: pva:Pvag_1640 hypothetical protein
YP_004235180.1	PFAM: Carbamoyl-phosphate synthase, large subunit, N-terminal; KEGG: ajs:Ajs_2043 carbamoyl-phosphate synthase L chain, ATP-binding
YP_004235181.1	KEGG: rpb:RPB_3477 hypothetical protein
YP_004235182.1	KEGG: ajs:Ajs_2042 carboxyl transferase; PFAM: Carboxyl transferase
YP_004235183.1	TIGRFAM: ArgK protein; PFAM: ArgK protein; KEGG: rfr:Rfer_2804 arginine/ornithine transport system ATPase; SMART: ATPase, AAA+ type, core
YP_004235184.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: pol:Bpro_2162 GCN5-related N-acetyltransferase
YP_004235185.1	TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; KEGG: dia:Dtpsy_1849 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding
YP_004235186.1	KEGG: dia:Dtpsy_1848 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004235187.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; MHYT; KEGG: cja:CJA_1898 putative sensory box histidine kinase/response regulator; SMART: Diguanylate cyclase, predicted; PAS
YP_004235188.1	KEGG: vap:Vapar_3555 heavy metal efflux pump, CzcA family; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein
YP_004235189.1	KEGG: vap:Vapar_3556 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004235190.1	PFAM: Outer membrane efflux protein; KEGG: vap:Vapar_3557 outer membrane efflux protein
YP_004235191.1	KEGG: pkn:PKH_111460 hypothetical protein
YP_004235192.1	KEGG: dac:Daci_3320 hypothetical protein
YP_004235193.1	KEGG: cgt:cgR_1596 hypothetical protein
YP_004235194.1	KEGG: xac:XAC2611 hypothetical protein
YP_004235195.1	KEGG: ctt:CtCNB1_0496 two component transcriptional regulator, LuxR; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004235196.1	KEGG: dac:Daci_4297 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; CHASE3; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235197.1	KEGG: dia:Dtpsy_1883 tRNA-dihydrouridine synthase A; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, YjbN; PFAM: tRNA-dihydrouridine synthase
YP_004235198.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold-4; CHASE; Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_1884 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004235199.1	KEGG: dia:Dtpsy_1885 RelA/SpoT domain protein; PFAM: RelA/SpoT; SMART: RelA/SpoT
YP_004235200.1	KEGG: ajs:Ajs_2063 polyhydroxyalkanoate depolymerase, intracellular; TIGRFAM: Polyhydroxyalkanoate depolymerase; PFAM: PHB de-polymerase, C-terminal
YP_004235201.1	KEGG: dac:Daci_3619 electron transport complex, RnfABCDGE type, B subunit; TIGRFAM: Electron transport complex, RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain
YP_004235202.1	KEGG: ajs:Ajs_2065 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235203.1	TIGRFAM: Succinyldiaminopimelate transaminase, beta/gammaproteobacteria; KEGG: dia:Dtpsy_1889 succinyldiaminopimelate transaminase; PFAM: Aminotransferase, class I/classII
YP_004235204.1	KEGG: ajs:Ajs_2067 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase
YP_004235205.1	KEGG: dia:Dtpsy_1891 twitching motility protein; TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E
YP_004235206.1	TIGRFAM: Succinyl-diaminopimelate desuccinylase, proteobacteria; HAMAP: Succinyl-diaminopimelate desuccinylase, proteobacteria; KEGG: ajs:Ajs_2069 succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004235207.1	TIGRFAM: Ribosomal protein L3-specific, glutamine-N5-methyltransferase; Modification methylase HemK; KEGG: dia:Dtpsy_1893 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; PFAM: Methyltransferase small
YP_004235208.1	KEGG: dia:Dtpsy_1894 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004235209.1	TIGRFAM: Acetoacetyl-CoA reductase; KEGG: dia:Dtpsy_1895 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235210.1	TIGRFAM: Thiolase; KEGG: xtr:100495567 acetyl-CoA acetyltransferase-like; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004235211.1	KEGG: dia:Dtpsy_1681 poly(R)-hydroxyalkanoic acid synthase, class I; TIGRFAM: Poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase, N-terminal; Alpha/beta hydrolase fold-1
YP_004235212.1	KEGG: dac:Daci_3599 hypothetical protein
YP_004235213.1	KEGG: dac:Daci_3598 hypothetical protein; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase
YP_004235214.1	TIGRFAM: Maleylacetoacetate isomerase; KEGG: dia:Dtpsy_1678 maleylacetoacetate isomerase; PFAM: Glutathione S-transferase, N-terminal
YP_004235215.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: ajs:Ajs_2078 fumarylacetoacetate (FAA) hydrolase
YP_004235216.1	PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_1676 NUDIX hydrolase
YP_004235217.1	PFAM: Serine/threonine-protein kinase-like domain; Leucine-rich repeat; KEGG: pae:PA2502 hypothetical protein
YP_004235218.1	PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: dac:Daci_5836 pyridoxamine 5'-phosphate oxidase-related FMN-binding
YP_004235219.1	KEGG: dac:Daci_5835 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235220.1	PFAM: Extracellular solute-binding protein, family 3; KEGG: gym:GYMC10_0791 prephenate dehydratase; SMART: Extracellular solute-binding protein, family 3
YP_004235221.1	KEGG: ajs:Ajs_2081 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase
YP_004235222.1	KEGG: nph:NP1132A hypothetical protein
YP_004235223.1	PFAM: S-adenosylmethionine-dependent methyltransferase; KEGG: dia:Dtpsy_1661 hypothetical protein
YP_004235224.1	PFAM: Protein of unknown function DUF2167, membrane; KEGG: ctt:CtCNB1_2266 putative transmembrane protein
YP_004235225.1	manually curated; KEGG: ctt:CtCNB1_2265 hypothetical protein
YP_004235226.1	KEGG: dac:Daci_0350 hypothetical protein
YP_004235227.1	PFAM: Acyltransferase 3; KEGG: dal:Dalk_1718 acyltransferase 3
YP_004235228.1	KEGG: dia:Dtpsy_1659 dihydrolipoamide dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Biotin/lipoyl attachment
YP_004235229.1	TIGRFAM: Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex; KEGG: dia:Dtpsy_1658 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding
YP_004235230.1	TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: dac:Daci_3980 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004235231.1	TIGRFAM: PAS; PFAM: PAS fold; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dia:Dtpsy_1656 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004235232.1	KEGG: ctt:CtCNB1_2245 two component transcriptional regulator, LuxR; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004235233.1	KEGG: pna:Pnap_1778 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004235234.1	KEGG: ajs:Ajs_2129 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F
YP_004235235.1	PFAM: Glutaredoxin; KEGG: dia:Dtpsy_1652 glutaredoxin
YP_004235236.1	TIGRFAM: Ribose 5-phosphate isomerase, type A; KEGG: ajs:Ajs_2131 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase, type A
YP_004235237.1	TIGRFAM: Dihydroorotate dehydrogenase, class 2; KEGG: ajs:Ajs_2132 dihydroorotate dehydrogenase 2; PFAM: Dihydroorotate dehydrogenase, class 1/ 2
YP_004235238.1	KEGG: dia:Dtpsy_1649 hypothetical protein
YP_004235239.1	KEGG: dia:Dtpsy_1648 hypothetical protein
YP_004235240.1	PFAM: Protein of unknown function DUF883, ElaB; KEGG: dia:Dtpsy_1647 protein of unknown function DUF883 ElaB
YP_004235241.1	PFAM: FAD dependent oxidoreductase; KEGG: dia:Dtpsy_1646 2-hydroxyglutarate dehydrogenase
YP_004235242.1	PFAM: Histone deacetylase superfamily; KEGG: ajs:Ajs_2137 histone deacetylase superfamily protein
YP_004235243.1	SMART: Exonuclease; TIGRFAM: DNA polymerase 3, epsilon subunit; DNA polymerase III, epsilon subunit; KEGG: vei:Veis_2379 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III
YP_004235244.1	KEGG: dia:Dtpsy_1643 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: Ferredoxin, 2Fe-2S type; PFAM: Ferredoxin
YP_004235245.1	KEGG: dia:Dtpsy_1642 chaperone protein HscA; TIGRFAM: ISC system FeS cluster assembly, HscA chaperone; PFAM: Heat shock protein 70
YP_004235246.1	TIGRFAM: Co-chaperone Hsc20; PFAM: Heat shock cognate protein B, C-terminal oligomerisation; Heat shock protein DnaJ, N-terminal; KEGG: dia:Dtpsy_1641 co-chaperone Hsc20; SMART: Heat shock protein DnaJ, N-terminal
YP_004235247.1	KEGG: dia:Dtpsy_1640 iron-sulfur cluster assembly protein IscA; TIGRFAM: ISC system FeS cluster assembly, IscA scaffold; FeS cluster insertion; PFAM: FeS cluster biogenesis
YP_004235248.1	KEGG: dia:Dtpsy_1639 FeS cluster assembly scaffold IscU; TIGRFAM: ISC system FeS cluster assembly, IscU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal
YP_004235249.1	TIGRFAM: Cysteine desulfurase; KEGG: dia:Dtpsy_1638 cysteine desulfurase IscS; PFAM: Aminotransferase, class V/Cysteine desulfurase
YP_004235250.1	KEGG: dia:Dtpsy_1637 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: ISC system FeS cluster assembly, IscR transcription factor; Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2
YP_004235251.1	TIGRFAM: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; UvrB/UvrC protein; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: vap:Vapar_2140 excinuclease ABC, B subunit; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004235252.1	KEGG: dac:Daci_4002 aromatic amino acid aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004235253.1	PFAM: CoA-transferase family III; KEGG: ajs:Ajs_2153 L-carnitine dehydratase/bile acid-inducible protein F
YP_004235254.1	KEGG: ajs:Ajs_2242 hypothetical protein
YP_004235255.1	KEGG: dac:Daci_4005 radical SAM domain-containing protein; PFAM: Radical SAM N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004235256.1	KEGG: mpt:Mpe_A2548 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235257.1	KEGG: har:HEAR1365 azurin precursor; TIGRFAM: Azurin, proteobacteria; PFAM: Blue (type 1) copper domain
YP_004235258.1	PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: ajs:Ajs_2244 hypothetical protein
YP_004235259.1	KEGG: ajs:Ajs_2245 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation
YP_004235260.1	KEGG: ajs:Ajs_2246 hypothetical protein
YP_004235261.1	PFAM: FAD dependent oxidoreductase; KEGG: ajs:Ajs_2247 FAD dependent oxidoreductase
YP_004235262.1	PFAM: Amidase; KEGG: dia:Dtpsy_1626 amidase
YP_004235263.1	KEGG: ajs:Ajs_2249 hypothetical protein
YP_004235264.1	TIGRFAM: D-serine ammonia-lyase; KEGG: dia:Dtpsy_1624 D-serine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004235265.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_1623 transcriptional regulator, LysR family
YP_004235266.1	manually curated; KEGG: bac:BamMC406_0672 hypothetical protein
YP_004235267.1	KEGG: pna:Pnap_0395 L-sorbosone dehydrogenase
YP_004235268.1	KEGG: ajs:Ajs_1639 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4; SMART: RNA-binding S4
YP_004235269.1	KEGG: zma:100280716 LOC100280716
YP_004235270.1	TIGRFAM: PAS; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; ATPase-like, ATP-binding domain; PAS fold; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; PAS fold-4; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: bph:Bphy_6399 signal transduction histidine kinase with CheB and CheR activity; SMART: MCP methyltransferase, CheR-type; Signal transduction response regulator, receiver domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain
YP_004235271.1	KEGG: azo:azo1729 hypothetical protein
YP_004235272.1	PFAM: Ferritin/Dps protein; KEGG: pmy:Pmen_2255 hypothetical protein
YP_004235273.1	PFAM: Stress-induced protein, KGG, repeat; KEGG: rcu:RCOM_1907550 hypothetical protein
YP_004235274.1	KEGG: vap:Vapar_0005 hypothetical protein
YP_004235275.1	KEGG: azo:azo1583 NAD(P)H dehydrogenase, quinone 1; PFAM: Flavodoxin-like fold
YP_004235276.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: avn:Avin_35830 regulatory protein, LysR-family
YP_004235277.1	PFAM: CsbD-like; KEGG: pna:Pnap_3279 CsbD family protein
YP_004235278.1	KEGG: eli:ELI_08600 chromosome segregation protein
YP_004235279.1	KEGG: dia:Dtpsy_2086 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT
YP_004235280.1	KEGG: ajs:Ajs_1627 tRNA(Ile)-lysidine synthetase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; Lysidine-tRNA(Ile) synthetase, substrate-binding domain
YP_004235281.1	PFAM: Acetyl-CoA carboxylase, alpha subunit; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; KEGG: ajs:Ajs_1625 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
YP_004235282.1	KEGG: dia:Dtpsy_2090 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain
YP_004235283.1	SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: vei:Veis_4936 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR
YP_004235284.1	PFAM: Tetratricopeptide TPR-1; KEGG: rfr:Rfer_1348 tetratricopeptide TPR_2
YP_004235285.1	PFAM: YkuD domain; KEGG: rfr:Rfer_1347 ErfK/YbiS/YcfS/YnhG
YP_004235286.1	KEGG: ajs:Ajs_1621 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004235287.1	KEGG: dac:Daci_2504 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type
YP_004235288.1	KEGG: dia:Dtpsy_2095 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallo-dependent phosphatase
YP_004235289.1	PFAM: Protein of unknown function DUF980; KEGG: ajs:Ajs_1618 hypothetical protein
YP_004235290.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dac:Daci_3484 OmpA/MotB domain-containing protein
YP_004235291.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: dac:Daci_3483 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; HAMP linker domain
YP_004235292.1	KEGG: dac:Daci_3482 hypothetical protein
YP_004235293.1	TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: vap:Vapar_1640 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase
YP_004235294.1	KEGG: vap:Vapar_1641 hypothetical protein
YP_004235295.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vei:Veis_4196 LysR family transcriptional regulator
YP_004235296.1	TIGRFAM: Alpha-ketoglutarate dehydrogenase; 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: dac:Daci_2498 2-oxoacid dehydrogenase subunit E1; PFAM: Transketolase, N-terminal
YP_004235297.1	KEGG: dac:Daci_2497 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004235298.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pna:Pnap_2403 antibiotic biosynthesis monooxygenase
YP_004235299.1	KEGG: dac:Daci_2496 hypothetical protein
YP_004235300.1	PFAM: Phospholipase/carboxylesterase; KEGG: dia:Dtpsy_2100 phospholipase/carboxylesterase
YP_004235301.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: ajs:Ajs_1613 extradiol ring-cleavage dioxygenase III subunit B
YP_004235302.1	PFAM: Peptide chain release factor class I/class II; KEGG: dia:Dtpsy_2102 class I peptide chain release factor
YP_004235303.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: ajs:Ajs_1611 alpha/beta hydrolase fold
YP_004235304.1	PFAM: Dehydroquinase, class II; TIGRFAM: Dehydroquinase, class II; HAMAP: Dehydroquinase, class II; KEGG: ajs:Ajs_1610 3-dehydroquinate dehydratase
YP_004235305.1	KEGG: dia:Dtpsy_2105 hypothetical protein
YP_004235306.1	TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; KEGG: dac:Daci_2489 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain
YP_004235307.1	PFAM: Membrane protein of unknown function; KEGG: vap:Vapar_0116 membrane protein of unknown function
YP_004235308.1	KEGG: bge:BC1002_5670 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004235309.1	KEGG: dac:Daci_5765 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004235310.1	KEGG: dac:Daci_5770 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235311.1	KEGG: dac:Daci_5771 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235312.1	PFAM: ABC transporter-like; KEGG: dac:Daci_5772 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235313.1	PFAM: Cysteine dioxygenase type I; KEGG: dac:Daci_5773 hypothetical protein
YP_004235314.1	TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: dac:Daci_5774 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
YP_004235315.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004235316.1	KEGG: nha:Nham_1876 hypothetical protein
YP_004235317.1	KEGG: ppf:Pput_3562 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235318.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: oan:Oant_3358 LysR family transcriptional regulator
YP_004235319.1	KEGG: dac:Daci_5775 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004235320.1	KEGG: dac:Daci_5776 hypothetical protein
YP_004235321.1	PFAM: Uncharacterised conserved protein UCP019302; KEGG: dac:Daci_2487 hypothetical protein
YP_004235322.1	manually curated; KEGG: vcn:VOLCADRAFT_105756 hypothetical protein
YP_004235323.1	KEGG: tin:Tint_1857 alpha/beta hydrolase fold-3 domain protein
YP_004235324.1	PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: azo:azo2325 hypothetical protein
YP_004235325.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: cti:RALTA_B2066 putative cardiolipin synthetase
YP_004235326.1	PFAM: Peptidase M23; KEGG: ajs:Ajs_2496 peptidase M23B
YP_004235327.1	KEGG: dia:Dtpsy_1363 pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F
YP_004235328.1	KEGG: ajs:Ajs_2498 Sel1 domain-containing protein; PFAM: Sel1-like; SMART: Sel1-like
YP_004235329.1	KEGG: dia:Dtpsy_1361 hypothetical protein
YP_004235330.1	PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: avn:Avin_49890 membrame protein
YP_004235331.1	KEGG: dac:Daci_5852 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235332.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: avn:Avin_29280 sugar ABC transport system, periplasmic substrate-binding protein
YP_004235333.1	PFAM: Protein of unknown function DUF1800; KEGG: vap:Vapar_3316 protein of unknown function DUF1800
YP_004235334.1	PFAM: Protein of unknown function DUF1501; KEGG: vap:Vapar_3315 protein of unknown function DUF1501
YP_004235335.1	PFAM: Phosphoesterase, DHHA1; KEGG: ajs:Ajs_2502 phosphoesterase, DHHA1
YP_004235336.1	KEGG: dia:Dtpsy_0101 hypothetical protein
YP_004235337.1	PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: ajs:Ajs_2505 tRNA pseudouridine synthase C
YP_004235338.1	PFAM: MgtC/SapB transporter; KEGG: ajs:Ajs_2506 MgtC/SapB transporter
YP_004235339.1	TIGRFAM: Redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; KEGG: reh:H16_B2319 SoxR family transcriptional regulator; SMART: HTH transcriptional regulator, MerR
YP_004235340.1	PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B2318 ribonuclease
YP_004235341.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1187 major facilitator transporter
YP_004235342.1	KEGG: dia:Dtpsy_1353 hypothetical protein
YP_004235343.1	PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: vei:Veis_1090 regulatory proteins, IclR
YP_004235344.1	PFAM: Porin, Gram-negative type; KEGG: rso:RSc2136 porin signal peptide protein
YP_004235345.1	KEGG: dia:Dtpsy_1350 GTP-binding protein HSR1-related; TIGRFAM: GTP-binding protein, ribosome biogenesis, YlqF; PFAM: GTP-binding protein, HSR1-related
YP_004235346.1	KEGG: dia:Dtpsy_1349 hypothetical protein
YP_004235347.1	KEGG: xal:XALc_2520 probable two component system sensor protein; PFAM: ATPase-like, ATP-binding domain; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF
YP_004235348.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mag:amb2263 putative threonine efflux protein
YP_004235349.1	KEGG: dia:Dtpsy_1340 thiamine pyrophosphate protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain
YP_004235350.1	TIGRFAM: Glutamate--cysteine ligase, monofunctional; KEGG: dia:Dtpsy_1339 glutamate/cysteine ligase; PFAM: Glutamate--cysteine ligase
YP_004235351.1	KEGG: xcv:XCV2059 putative secreted protein
YP_004235352.1	PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: vap:Vapar_1040 SMP-30/gluconolaconase/LRE domain protein
YP_004235353.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: vei:Veis_0735 short-chain dehydrogenase/reductase SDR
YP_004235354.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: xtr:100491370 HTH-type transcriptional regulator gbpR-like
YP_004235355.1	PFAM: Aldehyde dehydrogenase domain; Peptidase C27, rubella virus endopeptidase; KEGG: vap:Vapar_1043 aldehyde dehydrogenase
YP_004235356.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_1044 periplasmic binding protein/LacI transcriptional regulator
YP_004235357.1	KEGG: lch:Lcho_3200 sugar ABC transporter, periplasmic sugar-binding protein
YP_004235358.1	PFAM: ABC transporter-like; KEGG: xtr:100491203 l-arabinose transport ATP-binding protein AraG-like; SMART: ATPase, AAA+ type, core
YP_004235359.1	PFAM: ABC transporter permease; KEGG: xtr:100491033 ribose transport system permease protein rbsC-like
YP_004235360.1	PFAM: ABC transporter-like; KEGG: vap:Vapar_1048 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235361.1	PFAM: ABC transporter permease; KEGG: vap:Vapar_1049 inner-membrane translocator
YP_004235362.1	PFAM: ABC transporter permease; KEGG: vap:Vapar_1050 inner membrane ABC transporter permease protein YjfF
YP_004235363.1	KEGG: vei:Veis_0740 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase
YP_004235364.1	KEGG: rpf:Rpic12D_2596 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase
YP_004235365.1	PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: pst:PSPTO_2177 2-dehydro-3-deoxygalactonate kinase
YP_004235366.1	KEGG: rfr:Rfer_0950 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PFAM: KDPG/KHG aldolase
YP_004235367.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: psp:PSPPH_1958 galactonate dehydratase; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004235368.1	KEGG: vap:Vapar_3567 protein of unknown function DUF893 YccS/YhfK
YP_004235369.1	KEGG: xca:xccb100_3597 hypothetical protein
YP_004235370.1	KEGG: bvi:Bcep1808_4751 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235371.1	KEGG: dac:Daci_1875 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction response regulator, receiver domain
YP_004235372.1	TIGRFAM: Excisionase/Xis, DNA-binding; PFAM: Signal transduction response regulator, receiver domain; KEGG: dac:Daci_1874 response regulator receiver protein; SMART: Signal transduction response regulator, receiver domain
YP_004235373.1	KEGG: dac:Daci_1873 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004235374.1	KEGG: dac:Daci_0736 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004235375.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dac:Daci_0735 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif
YP_004235376.1	PFAM: Protein of unknown function DUF427; KEGG: vap:Vapar_3657 protein of unknown function DUF427
YP_004235377.1	PFAM: Ferredoxin; KEGG: dia:Dtpsy_2255 ferredoxin
YP_004235378.1	PFAM: Protein of unknown function DUF2235; KEGG: pol:Bpro_3072 hypothetical protein
YP_004235379.1	KEGG: ajs:Ajs_2766 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA
YP_004235380.1	KEGG: ajs:Ajs_2767 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004235381.1	TIGRFAM: NusB antitermination factor; HAMAP: NusB antitermination factor; KEGG: dia:Dtpsy_2258 NusB antitermination factor; PFAM: NusB/RsmB/TIM44
YP_004235382.1	KEGG: dia:Dtpsy_2259 aminotransferase; PFAM: Aminotransferase, class I/classII
YP_004235383.1	KEGG: dia:Dtpsy_2260 tol-pal system-associated acyl-CoA thioesterase; TIGRFAM: Tol-Pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily
YP_004235384.1	KEGG: dia:Dtpsy_2261 protein TolQ; TIGRFAM: Tol-Pal system, TolQ; PFAM: MotA/TolQ/ExbB proton channel
YP_004235385.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_2772 biopolymer transport protein ExbD/TolR
YP_004235386.1	KEGG: dia:Dtpsy_2263 protein TolA; TIGRFAM: Tol-Pal system, TolA; TonB, C-terminal; PFAM: TonB, C-terminal
YP_004235387.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: rsl:RPSI07_mp1205 putative cytochrome c peroxidase transmembrane protein
YP_004235388.1	KEGG: cvi:CV_3525 acid phosphatase; TIGRFAM: Acid phosphatase, AcpA; PFAM: Phosphoesterase
YP_004235389.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_4056 major facilitator transporter
YP_004235390.1	KEGG: dia:Dtpsy_2265 ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome o ubiquinol oxidase subunit II; PFAM: COX aromatic rich; Cytochrome c oxidase subunit II C-terminal
YP_004235391.1	TIGRFAM: Cytochrome o ubiquinol oxidase, subunit I; KEGG: dia:Dtpsy_2266 cytochrome o ubiquinol oxidase, subunit I; PFAM: Cytochrome c oxidase, subunit I
YP_004235392.1	KEGG: dac:Daci_4059 cytochrome o ubiquinol oxidase, subunit III; TIGRFAM: Cytochrome o ubiquinol oxidase, subunit III; PFAM: Cytochrome c oxidase, subunit III
YP_004235393.1	KEGG: dac:Daci_4060 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: Cytochrome o ubiquinol oxidase subunit IV; PFAM: Cytochrome C oxidase subunit IV prokaryotic
YP_004235394.1	PFAM: Surfeit locus 1; KEGG: ajs:Ajs_2779 surfeit locus 1 family protein
YP_004235395.1	KEGG: ajs:Ajs_2780 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004235396.1	KEGG: dia:Dtpsy_2271 two component transcriptional regulator, fis family; PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain
YP_004235397.1	PFAM: Protein of unknown function DUF81; KEGG: bbr:BB1250 hypothetical protein
YP_004235398.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_2444 LysR family transcriptional regulator
YP_004235399.1	PFAM: Peptidase U32; KEGG: pna:Pnap_3025 peptidase U32
YP_004235400.1	KEGG: dac:Daci_2439 hypothetical protein
YP_004235401.1	KEGG: dac:Daci_2438 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004235402.1	PFAM: SbmA/BacA-like; KEGG: mmw:Mmwyl1_1107 transport protein
YP_004235403.1	KEGG: dac:Daci_2433 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: Aconitase B, bacterial; PFAM: Aconitase B, N-terminal, bacterial; Aconitase B, HEAT-like, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha
YP_004235404.1	KEGG: dia:Dtpsy_2278 hypothetical protein
YP_004235405.1	PFAM: Aldehyde-lyase domain; KEGG: dac:Daci_2431 HpcH/HpaI aldolase
YP_004235406.1	KEGG: vap:Vapar_1433 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11
YP_004235407.1	KEGG: dia:Dtpsy_2281 malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD/NADP; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal
YP_004235408.1	KEGG: ajs:Ajs_2792 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR
YP_004235409.1	KEGG: ajs:Ajs_2793 succinate dehydrogenase subunit C; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
YP_004235410.1	KEGG: pna:Pnap_3033 succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, hydrophobic membrane anchor; PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit
YP_004235411.1	TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; KEGG: dia:Dtpsy_2285 succinate dehydrogenase, flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004235412.1	KEGG: vap:Vapar_1427 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein
YP_004235413.1	PFAM: Protein of unknown function DUF339; KEGG: dac:Daci_2423 hypothetical protein
YP_004235414.1	KEGG: dia:Dtpsy_2288 type II citrate synthase; TIGRFAM: Citrate synthase, type II; PFAM: Citrate synthase-like
YP_004235415.1	KEGG: vap:Vapar_0475 hypothetical protein
YP_004235416.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: fps:FP0497 ribosomal-protein-amino-adic N-acetyltransferase
YP_004235417.1	KEGG: dac:Daci_2415 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235418.1	KEGG: pna:Pnap_1230 alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal
YP_004235419.1	TIGRFAM: S-formylglutathione hydrolase; KEGG: ajs:Ajs_2801 carboxylesterase; PFAM: Putative esterase
YP_004235420.1	PFAM: Domain of unknown function DUF1705; Sulfatase; KEGG: vei:Veis_4349 sulfatase
YP_004235421.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: hse:Hsero_3317 LysR family transcription regulator protein
YP_004235422.1	KEGG: bgf:BC1003_4443 methyl-accepting chemotaxis sensory transducer with cache sensor; PFAM: Chemotaxis methyl-accepting receptor, signalling; Cache, type 2; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235423.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004235424.1	TIGRFAM: Tartrate dehydrogenase; KEGG: ajs:Ajs_2860 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004235425.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: rsl:RPSI07_mp1033 putative dipeptide transport ATP-binding protein DppD; SMART: ATPase, AAA+ type, core
YP_004235426.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_5636 binding-protein-dependent transport systems inner membrane component
YP_004235427.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: rsl:RPSI07_mp1035 putative dipeptide transport system permease protein DppB
YP_004235428.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: rsl:RPSI07_mp1036 putative ABC transporter, periplasmic solute-binding protein; dipeptide-binding protein
YP_004235429.1	PFAM: FAD dependent oxidoreductase; KEGG: rsl:RPSI07_mp1037 putative oxidoreductase with FAD/NAD(P)-binding domain
YP_004235430.1	TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; KEGG: rsl:RPSI07_mp1038 2-haloacid halidohydrolase type II
YP_004235431.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: rsl:RPSI07_mp1040 histone GCN5-related N-acetyltransferase
YP_004235432.1	KEGG: vap:Vapar_5630 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004235433.1	KEGG: vap:Vapar_5629 hypothetical protein; PFAM: Aminotransferase class-III
YP_004235434.1	KEGG: vap:Vapar_5628 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004235435.1	TIGRFAM: Peptidase M20D, amidohydrolase; KEGG: rsl:RPSI07_mp1053 putative hippurate hydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation
YP_004235436.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2; KEGG: rsl:RPSI07_mp1054 2-haloalkanoic acid dehalogenase
YP_004235437.1	KEGG: hoh:Hoch_6484 tetratricopeptide TPR_2 repeat protein
YP_004235438.1	PFAM: Drug/metabolite transporter; KEGG: rru:Rru_A0388 hypothetical protein
YP_004235439.1	KEGG: dia:Dtpsy_2293 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB
YP_004235440.1	KEGG: dar:Daro_0127 hypothetical protein
YP_004235441.1	PFAM: Acyltransferase 3; KEGG: dia:Dtpsy_2295 acyltransferase 3
YP_004235442.1	PFAM: 2-nitropropane dioxygenase, NPD; KEGG: ajs:Ajs_2807 2-nitropropane dioxygenase, NPD
YP_004235443.1	KEGG: dia:Dtpsy_2297 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, N-terminal, bacteria
YP_004235444.1	KEGG: dac:Daci_1403 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004235445.1	KEGG: dac:Daci_2390 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004235446.1	PFAM: Mechanosensitive ion channel MscS; KEGG: ajs:Ajs_2811 MscS mechanosensitive ion channel
YP_004235447.1	PFAM: Serine/Threonine acetyltransferase, YopJ; KEGG: xcv:XCV0471 avirulence protein AvrRxv
YP_004235448.1	PFAM: Crotonase, core; KEGG: ajs:Ajs_2812 enoyl-CoA hydratase
YP_004235449.1	PFAM: Histone deacetylase superfamily; KEGG: ajs:Ajs_2813 histone deacetylase superfamily protein
YP_004235450.1	KEGG: dia:Dtpsy_2303 ATPase associated with various cellular activities AAA_3; PFAM: ATPase, AAA-3; SMART: ATPase, AAA+ type, core
YP_004235451.1	PFAM: Domain of unknown function DUF58; KEGG: vei:Veis_2097 hypothetical protein
YP_004235452.1	KEGG: ajs:Ajs_2816 transglutaminase domain-containing protein; PFAM: Protein of unknown function DUF3488; Transglutaminase-like; SMART: Transglutaminase-like
YP_004235453.1	TIGRFAM: Lytic transglycosylase MltB; KEGG: dia:Dtpsy_2306 lytic murein transglycosylase B
YP_004235454.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mpt:Mpe_A0175 hypothetical protein
YP_004235455.1	KEGG: rop:ROP_06510 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235456.1	PFAM: Saccharopine dehydrogenase / Homospermidine synthase; KEGG: mpt:Mpe_A0176 hypothetical protein
YP_004235457.1	KEGG: mpt:Mpe_A0177 putative ligase; PFAM: AMP-dependent synthetase/ligase
YP_004235458.1	KEGG: mpt:Mpe_A0178 lipid-transfer protein; PFAM: Thiolase, C-terminal; Thiolase, N-terminal
YP_004235459.1	PFAM: NnrS; KEGG: pol:Bpro_4727 NnrS
YP_004235460.1	PFAM: Major facilitator superfamily MFS-1; KEGG: hdn:Hden_0807 major facilitator superfamily MFS_1
YP_004235461.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: hdn:Hden_0806 transcriptional regulator, TetR family
YP_004235462.1	TIGRFAM: Polymorphic membrane protein, Chlamydia; KEGG: xop:PXO_02579 hypothetical protein
YP_004235463.1	KEGG: bpt:Bpet0868 acyl-CoA synthetase
YP_004235464.1	KEGG: dac:Daci_2382 putative transporter signal peptide protein
YP_004235465.1	KEGG: dia:Dtpsy_2310 putative lipoprotein; manually curated; PFAM: Protein of unknown function DUF2242
YP_004235466.1	PFAM: CS domain; KEGG: dac:Daci_2381 heat shock protein HSP20
YP_004235467.1	TIGRFAM: Peptidase M22, glycoprotease, subgroup; Peptidase M22, O-sialoglycoprotein peptidase; KEGG: ajs:Ajs_2828 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: Peptidase M22, glycoprotease
YP_004235468.1	PFAM: Extracellular ligand-binding receptor; KEGG: ajs:Ajs_2829 extracellular ligand-binding receptor
YP_004235469.1	PFAM: ANTAR; KEGG: vei:Veis_2589 fis family transcriptional regulator
YP_004235470.1	KEGG: cnb:CNBH3240 hypothetical protein
YP_004235471.1	KEGG: ajs:Ajs_2831 twin-arginine translocation pathway signal
YP_004235472.1	KEGG: dac:Daci_2376 nitrate ABC transporter, inner membrane subunit; TIGRFAM: Nitrate transport permease; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235473.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Nitrate transport ATP-binding subunit C/D; KEGG: ajs:Ajs_2833 nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter-like
YP_004235474.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: pol:Bpro_0286 bifunctional deaminase-reductase-like
YP_004235475.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pol:Bpro_0287 hypothetical protein
YP_004235476.1	KEGG: dda:Dd703_2506 putative lipoprotein
YP_004235478.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_5829 major facilitator transporter
YP_004235479.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bph:Bphy_5443 LysR family transcriptional regulator
YP_004235480.1	TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: bav:BAV1262 2-oxo-hept-3-ene-1,7-dioate hydratase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004235481.1	KEGG: lch:Lcho_3006 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal
YP_004235482.1	KEGG: pla:Plav_1786 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004235483.1	PFAM: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B; KEGG: nar:Saro_2607 extradiol ring-cleavage dioxygenase III subunit B
YP_004235484.1	PFAM: Major facilitator superfamily MFS-1; KEGG: rsl:RPSI07_1120 putative transporter, major facilitator superfamily MFS
YP_004235485.1	PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: pla:Plav_1788 5-carboxymethyl-2-hydroxymuconate delta-isomerase
YP_004235486.1	TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: bph:Bphy_5446 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal
YP_004235487.1	KEGG: vap:Vapar_5001 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004235488.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_1311 transcriptional regulator, LysR family
YP_004235489.1	KEGG: ctt:CtCNB1_1313 twin-arginine translocation pathway signal; PFAM: Beta-lactamase-like; Twin-arginine translocation pathway, signal sequence, bacterial/archaeal; SMART: Beta-lactamase-like
YP_004235490.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: dze:Dd1591_2013 extracellular solute-binding protein family 1
YP_004235491.1	PFAM: Uncharacterised protein family YphA; KEGG: avi:Avi_3598 hypothetical protein
YP_004235492.1	PFAM: Protein of unknown function DUF1486; KEGG: ctt:CtCNB1_1314 hypothetical protein
YP_004235493.1	PFAM: Carboxylesterase, type B; KEGG: pat:Patl_0874 carboxylesterase, type B
YP_004235494.1	TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; KEGG: pzu:PHZ_p0286 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase
YP_004235495.1	KEGG: hse:Hsero_2470 chemotaxis response regulator CheY; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004235496.1	KEGG: bgl:bglu_1g28860 hypothetical protein
YP_004235497.1	KEGG: hse:Hsero_2472 hypothetical protein
YP_004235498.1	PFAM: Chemotaxis methyl-accepting receptor, signalling; KEGG: hse:Hsero_2473 methyl-accepting chemotaxis protein
YP_004235499.1	KEGG: bam:Bamb_3462 putative CheA signal transduction histidine kinases; PFAM: HAMP linker domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; PAC motif
YP_004235500.1	KEGG: psa:PST_2903 short-chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235501.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: smd:Smed_5891 LysR family transcriptional regulator
YP_004235502.1	KEGG: dds:Ddes_2221 hypothetical protein
YP_004235503.1	KEGG: psa:PST_3894 periplasmic trehalase precursor; PFAM: Glycoside hydrolase, family 37
YP_004235504.1	KEGG: bph:Bphy_7767 carboxyl transferase; PFAM: Carboxyl transferase
YP_004235505.1	PFAM: Luciferase-like, subgroup; KEGG: rso:RS03171 putative luciferase (monooxygenase) oxidoreductase protein
YP_004235506.1	KEGG: dac:Daci_2374 signal-transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004235507.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: dac:Daci_2372 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif; HAMP linker domain
YP_004235508.1	KEGG: ajs:Ajs_2836 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004235509.1	KEGG: dac:Daci_3368 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein
YP_004235510.1	KEGG: ajs:Ajs_2838 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004235511.1	PFAM: Chemoreceptor glutamine deamidase CheD; KEGG: bba:Bd2829 chemotaxis protein
YP_004235512.1	PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: bba:Bd2830 chemotaxis protein methyltransferase; SMART: MCP methyltransferase, CheR-type
YP_004235513.1	KEGG: bba:Bd2828 hypothetical protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004235514.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-3; KEGG: bpu:BPUM_3598 sensor histidine kinase; SMART: Chemotaxis methyl-accepting receptor, signalling; PAC motif
YP_004235515.1	KEGG: rso:RS05358 hypothetical protein
YP_004235516.1	TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; KEGG: ajs:Ajs_2839 assimilatory nitrite reductase (NAD(P)H) large subunit precursor; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like
YP_004235517.1	KEGG: ajs:Ajs_2840 assimilatory nitrite reductase (NAD(P)H) small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; PFAM: Rieske [2Fe-2S] iron-sulphur domain
YP_004235518.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; BFD-like [2Fe-2S]-binding domain; KEGG: vei:Veis_2595 molybdopterin oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain
YP_004235519.1	PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: dia:Dtpsy_2331 glycosyl transferase family protein
YP_004235520.1	TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: ajs:Ajs_2843 uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole methylase
YP_004235521.1	KEGG: hse:Hsero_1210 methyl-accepting chemotaxis protein
YP_004235522.1	KEGG: xca:xccb100_0675 exported cellulase; PFAM: Glycoside hydrolase, family 5; Cellulose-binding domain, family II, bacterial type; SMART: Cellulose-binding domain, family II, bacterial type
YP_004235523.1	KEGG: rso:RS03084 hypothetical protein
YP_004235524.1	PFAM: Thioesterase superfamily; KEGG: dia:Dtpsy_2333 thioesterase superfamily protein
YP_004235525.1	PFAM: Carbonic anhydrase; KEGG: bmj:BMULJ_02244 carbonic anhydrase; SMART: Carbonic anhydrase
YP_004235526.1	PFAM: Sulphate transporter; KEGG: mca:MCA1443 sulfate transporter family protein
YP_004235527.1	PFAM: Fatty acid hydroxylase; KEGG: vap:Vapar_3537 fatty acid hydroxylase
YP_004235528.1	KEGG: dia:Dtpsy_2335 HI0933 family protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like
YP_004235529.1	KEGG: ajs:Ajs_2855 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004235530.1	PFAM: NIPSNAP; KEGG: dia:Dtpsy_2345 NIPSNAP family containing protein
YP_004235531.1	PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dia:Dtpsy_2346 antibiotic biosynthesis monooxygenase
YP_004235532.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; HAMP linker domain; PAS fold-4; Diguanylate cyclase, predicted; KEGG: mpt:Mpe_A2664 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif; HAMP linker domain
YP_004235533.1	TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: vap:Vapar_3540 30S ribosomal protein S21; PFAM: Ribosomal protein S21
YP_004235534.1	KEGG: dia:Dtpsy_2348 GatB/YqeY domain-containing protein
YP_004235535.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: xcv:XCV1348 glutathione transferase
YP_004235536.1	KEGG: ctt:CtCNB1_0620 helix-turn-helix, type 11
YP_004235537.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2361 LysR family transcriptional regulator
YP_004235538.1	TIGRFAM: Tartrate dehydrogenase; KEGG: ajs:Ajs_2860 tartrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase
YP_004235539.1	PFAM: Patatin/Phospholipase A2-related; KEGG: dac:Daci_3706 patatin
YP_004235540.1	PFAM: General substrate transporter; KEGG: cti:RALTA_B0625 putative transporter; major facilitator superfamily MFS-1
YP_004235541.1	PFAM: Alanine racemase, N-terminal; KEGG: bcm:Bcenmc03_3951 alanine racemase domain-containing protein
YP_004235542.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rsc:RCFBP_10744 transcriptional regulators, LysR family
YP_004235543.1	KEGG: hmg:100214453 similar to predicted protein
YP_004235544.1	KEGG: art:Arth_2978 hypothetical protein
YP_004235545.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_2349 LysR family transcriptional regulator
YP_004235546.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004235547.1	KEGG: ctt:CtCNB1_3468 TctC
YP_004235548.1	PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; KEGG: ctt:CtCNB1_3469 outer membrane protein precursor; SMART: SAF domain
YP_004235549.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004235550.1	TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: ctt:CtCNB1_3471 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: Aldehyde-lyase domain
YP_004235551.1	KEGG: dac:Daci_3462 hypothetical protein
YP_004235552.1	KEGG: bbe:BBR47_58940 hypothetical protein
YP_004235553.1	PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: dac:Daci_2323 peptidase U62 modulator of DNA gyrase
YP_004235554.1	PFAM: Ribosome-associated, YjgA; KEGG: dia:Dtpsy_0970 protein of unknown function DUF615
YP_004235555.1	TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: ajs:Ajs_1051 molybdopterin adenylyltransferase; SMART: Molybdopterin binding
YP_004235556.1	KEGG: acd:AOLE_13160 hypothetical protein
YP_004235557.1	KEGG: ajs:Ajs_1047 serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase
YP_004235558.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: ajs:Ajs_1046 RNA methyltransferase
YP_004235559.1	KEGG: rso:RS01697 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20
YP_004235560.1	PFAM: ABC transporter-like; KEGG: reu:Reut_A1069 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235561.1	PFAM: Protein of unknown function DUF990; KEGG: dac:Daci_5808 putative ABC transporter permease protein
YP_004235562.1	PFAM: Protein of unknown function DUF990; KEGG: dac:Daci_5807 hypothetical protein
YP_004235563.1	PFAM: Inositol monophosphatase; KEGG: dia:Dtpsy_0963 inositol-phosphate phosphatase
YP_004235564.1	KEGG: dia:Dtpsy_0962 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver domain; Metal-dependent phosphohydrolase, HD subdomain; SMART: Signal transduction response regulator, receiver domain; Metal-dependent phosphohydrolase, HD domain
YP_004235565.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; PAS fold-4; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; KEGG: dia:Dtpsy_0961 multi-sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain
YP_004235566.1	PFAM: Mechanosensitive ion channel MscS; KEGG: vap:Vapar_3568 MscS mechanosensitive ion channel
YP_004235567.1	PFAM: MmgE/PrpD; KEGG: dac:Daci_1760 MmgE/PrpD family protein
YP_004235568.1	KEGG: dac:Daci_1759 CoA-binding domain-containing protein; PFAM: CoA-binding; SMART: CoA-binding
YP_004235569.1	PFAM: Crotonase, core; KEGG: dac:Daci_1758 enoyl-CoA hydratase/isomerase
YP_004235570.1	KEGG: dac:Daci_1757 hypothetical protein
YP_004235571.1	KEGG: dac:Daci_1756 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004235572.1	KEGG: dia:Dtpsy_0292 phosphoenolpyruvate-protein phosphotransferase
YP_004235573.1	manually curated; PFAM: Diguanylate phosphodiesterase, EAL domain; GAF; KEGG: dac:Daci_4396 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: Diguanylate phosphodiesterase, EAL domain; GAF; Diguanylate cyclase, predicted
YP_004235574.1	TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; KEGG: dia:Dtpsy_1076 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core
YP_004235575.1	KEGG: hse:Hsero_2406 NADH-dependent enoyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235576.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004235577.1	KEGG: sus:Acid_6546 hypothetical protein
YP_004235578.1	KEGG: hoh:Hoch_3531 NADH/ubiquinone/plastoquinone (complex I)
YP_004235579.1	KEGG: dac:Daci_2521 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat
YP_004235580.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Gp5, C-terminal
YP_004235581.1	KEGG: ajs:Ajs_1155 20S proteasome, A and B subunits
YP_004235582.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dia:Dtpsy_1074 alpha/beta hydrolase fold protein
YP_004235583.1	PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: sil:SPOA0208 oxidoreductase, FAD-binding
YP_004235584.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold-4; PAS fold; KEGG: tin:Tint_0808 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; PAS; PAC motif
YP_004235585.1	TIGRFAM: Bacitracin resistance protein BacA; HAMAP: Bacitracin resistance protein BacA; KEGG: ajs:Ajs_1152 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA
YP_004235586.1	KEGG: vap:Vapar_3605 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004235587.1	PFAM: Acriflavin resistance protein; KEGG: vap:Vapar_3606 acriflavin resistance protein
YP_004235588.1	PFAM: Acriflavin resistance protein; KEGG: vap:Vapar_3607 acriflavin resistance protein
YP_004235589.1	KEGG: vap:Vapar_3608 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004235590.1	KEGG: dac:Daci_2264 hypothetical protein
YP_004235591.1	KEGG: dia:Dtpsy_1070 histidine kinase internal region; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004235592.1	KEGG: dia:Dtpsy_1069 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain
YP_004235593.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dia:Dtpsy_0891 lysine exporter protein (LysE/YggA)
YP_004235594.1	KEGG: vei:Veis_2296 methyl-accepting chemotaxis sensory transducer
YP_004235595.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0890 ABC transporter related
YP_004235596.1	KEGG: pna:Pnap_3234 hypothetical protein
YP_004235597.1	PFAM: HTH transcriptional regulator, LysR; Transport-associated OB, type 1; KEGG: dia:Dtpsy_2469 putative transcriptional regulator, ModE family
YP_004235598.1	KEGG: dac:Daci_2521 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat
YP_004235599.1	KEGG: vei:Veis_2888 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1
YP_004235600.1	KEGG: ajs:Ajs_3125 molybdate ABC transporter, inner membrane subunit; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004235601.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Molybdate ABC transporter, ATP-binding protein; KEGG: ajs:Ajs_3126 molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Transport-associated OB, type 1
YP_004235602.1	KEGG: etr:ETAE_1053 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi
YP_004235603.1	KEGG: har:HEAR2553 glycine betaine transporter OpuD; TIGRFAM: BCCT transporter; PFAM: BCCT transporter
YP_004235604.1	TIGRFAM: 1,4-alpha-glucan-branching enzyme; KEGG: vap:Vapar_1978 glycogen branching enzyme; PFAM: Alpha-amylase, C-terminal all beta; Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain
YP_004235605.1	PFAM: Protein of unknown function DUF3416; Glycosyl hydrolase, family 13, catalytic domain; KEGG: vap:Vapar_1979 alpha amylase catalytic region
YP_004235606.1	SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; Trehalose synthase/probable maltokinase, C-terminal; KEGG: vap:Vapar_1980 trehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain
YP_004235607.1	PFAM: Conserved TM helix; KEGG: vap:Vapar_1981 TM helix repeat-containing protein
YP_004235608.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_1753 tripartite ATP-independent periplasmic transporter DctQ
YP_004235609.1	KEGG: pol:Bpro_1752 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004235610.1	KEGG: pol:Bpro_1751 hypothetical protein
YP_004235611.1	KEGG: vap:Vapar_0518 hypothetical protein
YP_004235612.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: mpt:Mpe_A2835 putative exported solute binding protein
YP_004235613.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Deoxyxylulose-5-phosphate synthase; KEGG: dia:Dtpsy_0956 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Dehydrogenase, E1 component
YP_004235614.1	KEGG: dia:Dtpsy_0955 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004235615.1	KEGG: dia:Dtpsy_0954 exodeoxyribonuclease VII, small subunit; TIGRFAM: Exonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit
YP_004235616.1	PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: dia:Dtpsy_0953 Rieske (2Fe-2S) domain protein
YP_004235617.1	KEGG: dia:Dtpsy_0952 putative transmembrane protein
YP_004235618.1	PFAM: Rhodanese-like; KEGG: ajs:Ajs_1033 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like
YP_004235619.1	PFAM: NLPA lipoprotein; KEGG: dac:Daci_1782 NlpA lipoprotein
YP_004235620.1	PFAM: ABC transporter-like; NIL domain; KEGG: dac:Daci_1781 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235621.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1780 binding-protein-dependent transport systems inner membrane component
YP_004235622.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: dac:Daci_1779 acyl-CoA dehydrogenase type 2
YP_004235623.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: bbt:BBta_2572 putative acyl-CoA dehydrogenase
YP_004235624.1	KEGG: vap:Vapar_1906 DszA family monooxygenase; TIGRFAM: Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A; PFAM: Luciferase-like, subgroup
YP_004235625.1	PFAM: Flagellar transcriptional activator; KEGG: ajs:Ajs_2884 flagellar transcriptional activator, FlhD subunit
YP_004235626.1	PFAM: Flagellar transcriptional activator FlhC; KEGG: ajs:Ajs_2885 transcriptional activator FlhC
YP_004235627.1	KEGG: dia:Dtpsy_2373 hypothetical protein
YP_004235628.1	KEGG: dia:Dtpsy_2374 hypothetical protein
YP_004235629.1	PFAM: Uncharacterised protein family UPF0118; KEGG: vap:Vapar_1364 protein of unknown function UPF0118
YP_004235630.1	KEGG: ajs:Ajs_2888 YccS/YhfK family integral membrane protein; TIGRFAM: Integral membrane protein, YccS/YhfK; Integral membrane protein, YccS; PFAM: Fusaric acid resistance protein, conserved region
YP_004235631.1	KEGG: dia:Dtpsy_2376 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_004235632.1	KEGG: xtr:100488233 porphobilinogen deaminase-like; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain
YP_004235633.1	KEGG: ajs:Ajs_2891 uroporphyrinogen-III synthase
YP_004235634.1	PFAM: HemX; KEGG: ajs:Ajs_2892 protein of unknown function DUF513, HemX
YP_004235635.1	PFAM: HemY, N-terminal; KEGG: ajs:Ajs_2893 HemY domain-containing protein
YP_004235636.1	KEGG: pfl:PFL_3416 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004235637.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_2217 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004235638.1	PFAM: Peptidase M48; KEGG: vap:Vapar_2898 peptidase M48 Ste24p
YP_004235639.1	TIGRFAM: Valyl-tRNA synthetase; KEGG: dia:Dtpsy_2382 valyl-tRNA synthetase
YP_004235640.1	TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: vei:Veis_1034 UTP-glucose-1-phosphate uridylyltransferase GalU; PFAM: Nucleotidyl transferase
YP_004235641.1	PFAM: SirA-like; KEGG: dia:Dtpsy_2384 SirA family protein
YP_004235642.1	PFAM: NUDIX hydrolase domain; KEGG: pol:Bpro_3725 NUDIX hydrolase
YP_004235643.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; KEGG: dia:Dtpsy_2386 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004235644.1	KEGG: ppp:PHYPADRAFT_103820 hypothetical protein
YP_004235645.1	KEGG: dac:Daci_3466 hypothetical protein
YP_004235646.1	KEGG: mgr:MGG_06162 hypothetical protein
YP_004235648.1	KEGG: ajs:Ajs_2975 hypothetical protein
YP_004235649.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_2978 LysR family transcriptional regulator
YP_004235650.1	KEGG: vei:Veis_1734 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain
YP_004235651.1	KEGG: vap:Vapar_0119 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004235652.1	KEGG: dac:Daci_2195 hypothetical protein
YP_004235653.1	KEGG: dia:Dtpsy_2412 hypothetical protein
YP_004235654.1	PFAM: Regulator of K+ conductance, N-terminal; KEGG: ajs:Ajs_2986 NAD-dependent epimerase/dehydratase
YP_004235655.1	KEGG: dia:Dtpsy_2414 CDP-6-deoxy-delta-3,4-glucoseen reductase; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Oxidoreductase FAD/NAD(P)-binding
YP_004235656.1	KEGG: dia:Dtpsy_2415 hypothetical protein
YP_004235657.1	KEGG: dia:Dtpsy_2416 hypothetical protein
YP_004235658.1	KEGG: dac:Daci_2189 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK
YP_004235659.1	TIGRFAM: Poly(A) polymerase, PcnB; KEGG: dia:Dtpsy_2418 poly(A) polymerase; PFAM: Poly A polymerase, head domain
YP_004235660.1	TIGRFAM: HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial; HAD-superfamily hydrolase, subfamily IB, PSPase-like; KEGG: dia:Dtpsy_2419 HAD-superfamily subfamily IB hydrolase, TIGR01490
YP_004235661.1	KEGG: dia:Dtpsy_2420 DnaA regulatory inactivator Hda; TIGRFAM: Chromosomal replication control, regulator Hda; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda)
YP_004235662.1	TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: ajs:Ajs_2994 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein
YP_004235663.1	PFAM: Uncharacterised protein family UPF0118; KEGG: ajs:Ajs_2995 hypothetical protein
YP_004235664.1	PFAM: Isochorismatase-like; KEGG: pna:Pnap_3001 isochorismatase hydrolase
YP_004235665.1	PFAM: ThiJ/PfpI; KEGG: rfr:Rfer_2521 ThiJ/PfpI
YP_004235666.1	KEGG: pna:Pnap_3002 AraC family transcriptional regulator; PFAM: ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235667.1	KEGG: ajs:Ajs_3296 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like
YP_004235668.1	PFAM: Globin, truncated bacterial-like; KEGG: pna:Pnap_3162 globin
YP_004235669.1	PFAM: Protein of unknown function DUF3034; KEGG: pna:Pnap_3161 hypothetical protein
YP_004235670.1	PFAM: Protein of unknown function DUF3455; KEGG: dac:Daci_5291 hypothetical protein
YP_004235671.1	KEGG: hse:Hsero_3545 methyl-accepting chemotaxis I protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; Nitrate/nitrite sensing protein; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235672.1	KEGG: vei:Veis_3178 L-lactate dehydrogenase (cytochrome); PFAM: FMN-dependent dehydrogenase
YP_004235673.1	KEGG: rsl:RPSI07_mp1429 conserved exported protein of unknown function
YP_004235674.1	PFAM: Drug/metabolite transporter; KEGG: spe:Spro_3950 hypothetical protein
YP_004235675.1	TIGRFAM: Penicillin-binding protein 1C; KEGG: ajs:Ajs_3299 penicillin-binding protein 1C; PFAM: Glycosyl transferase, family 51; Penicillin-binding, C-terminal; Penicillin-binding protein, transpeptidase
YP_004235676.1	KEGG: dac:Daci_4297 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; CHASE3; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235677.1	PFAM: Protein of unknown function DUF1486; KEGG: xal:XALc_3037 hypothetical secreted protein
YP_004235678.1	PFAM: Protein of unknown function DUF3079; KEGG: dac:Daci_1820 hypothetical protein
YP_004235679.1	PFAM: Alpha-2-macroglobulin, N-terminal 2; Alpha-2-macroglobulin MG1 domain; Alpha-2-macroglobulin; Alpha-2-macroglobulin, N-terminal; KEGG: dia:Dtpsy_2661 alpha-2-macroglobulin domain protein
YP_004235680.1	PFAM: Uncharacterised conserved protein UCP028704, OpgC; KEGG: vap:Vapar_1356 acyltransferase family protein
YP_004235681.1	PFAM: Lipase, GDSL; KEGG: vap:Vapar_1357 lipolytic protein G-D-S-L family
YP_004235682.1	PFAM: Major facilitator superfamily MFS-1; KEGG: abb:ABBFA_000243 major facilitator superfamily protein
YP_004235683.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rle:RL0361 LysR family transcriptional regulator
YP_004235684.1	KEGG: dia:Dtpsy_2663 hypothetical protein
YP_004235685.1	TIGRFAM: Argininosuccinate lyase; KEGG: dia:Dtpsy_2664 argininosuccinate lyase; PFAM: Lyase 1, N-terminal
YP_004235686.1	KEGG: ajs:Ajs_3313 histidine kinase internal region; PFAM: Signal transduction histidine kinase, internal region; SMART: ATPase-like, ATP-binding domain
YP_004235687.1	KEGG: vei:Veis_2880 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain
YP_004235688.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004235689.1	KEGG: bpt:Bpet3880 argininosuccinate lyase; PFAM: Lyase 1, N-terminal
YP_004235690.1	PFAM: Zinc/iron permease; KEGG: dac:Daci_5323 zinc/iron permease
YP_004235691.1	KEGG: dia:Dtpsy_2668 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase
YP_004235692.1	KEGG: vap:Vapar_1692 transcriptional regulator-like protein
YP_004235693.1	PFAM: Putative thiol-disulphide oxidoreductase DCC; KEGG: pna:Pnap_1482 putative thiol-disulphide oxidoreductase DCC
YP_004235694.1	PFAM: NAD-dependent epimerase/dehydratase; KEGG: dac:Daci_4632 NAD-dependent epimerase/dehydratase
YP_004235695.1	KEGG: pna:Pnap_1480 NAD-dependent epimerase/dehydratase
YP_004235696.1	PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: dac:Daci_4634 integral membrane protein-like protein
YP_004235697.1	KEGG: pol:Bpro_2001 aspartate racemase; TIGRFAM: Aspartate racemase; PFAM: Asp/Glu/hydantoin racemase
YP_004235698.1	KEGG: vap:Vapar_1546 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004235699.1	KEGG: vap:Vapar_1545 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004235700.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_1544 transcriptional regulator, LysR family
YP_004235701.1	KEGG: dac:Daci_0205 hypothetical protein
YP_004235702.1	KEGG: dac:Daci_0205 hypothetical protein
YP_004235703.1	KEGG: azl:AZL_f01250 hypothetical protein
YP_004235704.1	KEGG: avi:Avi_5260 hypothetical protein
YP_004235705.1	SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; 3'-5' exonuclease; Helix-hairpin-helix motif, class 2; TIGRFAM: DNA polymerase 1; KEGG: dia:Dtpsy_2669 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 3'-5' exonuclease; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain
YP_004235706.1	PFAM: Protein of unknown function DUF2782; KEGG: dia:Dtpsy_2671 hypothetical protein
YP_004235707.1	TIGRFAM: Homoserine kinase ThrB; KEGG: ajs:Ajs_3320 homoserine kinase; PFAM: Aminoglycoside phosphotransferase
YP_004235708.1	KEGG: dia:Dtpsy_2673 hypothetical protein
YP_004235709.1	PFAM: Protein of unknown function DUF839; KEGG: bte:BTH_I2864 hypothetical protein
YP_004235710.1	PFAM: Peptidase M75, Imelysin; KEGG: mpt:Mpe_A1458 iron-regulated protein A, putative
YP_004235711.1	PFAM: Protein of unknown function DUF1111; KEGG: pna:Pnap_2562 hypothetical protein
YP_004235712.1	PFAM: Peptidase M75, Imelysin; KEGG: pna:Pnap_2563 periplasmic lipoprotein-like protein
YP_004235713.1	PFAM: Uncharacterised conserved protein UCP028101; KEGG: pna:Pnap_2564 hypothetical protein
YP_004235714.1	PFAM: Collagen triple helix repeat; KEGG: aoe:Clos_0099 triple helix repeat-containing collagen
YP_004235715.1	PFAM: Aspartyl/Asparaginyl beta-hydroxylase; KEGG: pen:PSEEN0741 hypothetical protein
YP_004235716.1	KEGG: pfo:Pfl01_0164 hypothetical protein
YP_004235717.1	KEGG: sti:Sthe_1117 extracellular ligand-binding receptor
YP_004235718.1	PFAM: Phage tail collar; KEGG: mxa:MXAN_0326 phage tail collar domain-containing protein
YP_004235719.1	PFAM: DNA helicase, UvrD/REP type; KEGG: dia:Dtpsy_2677 UvrD/REP helicase
YP_004235720.1	PFAM: Sugar isomerase (SIS); Helix-turn-helix protein RpiR; KEGG: cti:RALTA_B1900 putative HTH transcriptional regulator, sugar isomerase (SIS)domain; RpiR family
YP_004235721.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: cti:RALTA_B1901 glutamate carboxypeptidase
YP_004235722.1	KEGG: dac:Daci_1370 hypothetical protein
YP_004235723.1	KEGG: dia:Dtpsy_2678 hypothetical protein
YP_004235724.1	TIGRFAM: Guanosine monophosphate reductase 2; KEGG: ajs:Ajs_3326 guanosine 5'-monophosphate oxidoreductase; PFAM: IMP dehydrogenase/GMP reductase
YP_004235725.1	PFAM: Protein of unknown function DUF1348; KEGG: dac:Daci_5658 hypothetical protein
YP_004235726.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5659 TetR family transcriptional regulator
YP_004235727.1	PFAM: Stress-induced protein, KGG, repeat; KEGG: dia:Dtpsy_0320 hypothetical protein
YP_004235728.1	KEGG: dac:Daci_4344 two component, sigma54 specific, fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core
YP_004235729.1	KEGG: ank:AnaeK_2396 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004235730.1	KEGG: dac:Daci_4348 RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54; RNA polymerase sigma factor 54, core-binding
YP_004235731.1	KEGG: vap:Vapar_2119 hypothetical protein
YP_004235732.1	PFAM: DR1885-like metal-binding protein; KEGG: dia:Dtpsy_2691 protein of unknown function DUF461
YP_004235733.1	KEGG: pol:Bpro_0389 Bcr/CflA subfamily drug resistance transporter; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1
YP_004235734.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dac:Daci_5335 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004235735.1	KEGG: ajs:Ajs_3345 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004235736.1	KEGG: ajs:Ajs_3346 oligoribonuclease; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease
YP_004235737.1	KEGG: ajs:Ajs_3347 STE24 endopeptidase; PFAM: Peptidase M48
YP_004235738.1	KEGG: dia:Dtpsy_2696 transcriptional coactivator/pterin dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase
YP_004235739.1	KEGG: ajs:Ajs_3349 ribosome small subunit-dependent GTPase A; TIGRFAM: Ribosome biogenesis GTPase RsgA, putative; PFAM: Ribosome biogenesis GTPase RsgA, putative
YP_004235740.1	PFAM: Cobalamin biosynthesis CobD/CbiB; KEGG: ajs:Ajs_3350 cobalamin biosynthesis protein CbiB
YP_004235741.1	PFAM: NUDIX hydrolase domain; KEGG: ajs:Ajs_3351 NUDIX hydrolase
YP_004235742.1	KEGG: ctt:CtCNB1_0900 ribosomal protein L19; TIGRFAM: Ribosomal protein L19; PFAM: Ribosomal protein L19
YP_004235743.1	TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: dia:Dtpsy_2701 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase
YP_004235744.1	KEGG: ajs:Ajs_3354 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel
YP_004235745.1	KEGG: dia:Dtpsy_2703 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16
YP_004235746.1	KEGG: ajs:Ajs_3356 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain
YP_004235747.1	KEGG: dia:Dtpsy_2705 hypothetical protein
YP_004235748.1	PFAM: Phosphate transporter; KEGG: dia:Dtpsy_2706 phosphate transporter
YP_004235749.1	PFAM: Putitive phosphate transport regulator; KEGG: dia:Dtpsy_2707 protein of unknown function DUF47
YP_004235750.1	KEGG: pna:Pnap_2541 OmpA domain-containing protein
YP_004235751.1	PFAM: ABC transporter-like; KEGG: ajs:Ajs_3361 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235752.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_2710 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235753.1	PFAM: ABC transporter permease; KEGG: vei:Veis_3000 inner-membrane translocator
YP_004235754.1	PFAM: ABC transporter permease; KEGG: dia:Dtpsy_2712 inner-membrane translocator
YP_004235755.1	manually curated; PFAM: ATPase, AAA-type, core; KEGG: hse:Hsero_1906 recombination factor RarA protein; SMART: ATPase, AAA+ type, core
YP_004235756.1	KEGG: hse:Hsero_1906 recombination factor RarA protein; PFAM: DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core
YP_004235757.1	PFAM: Uracil-DNA glycosylase-like; KEGG: dar:Daro_1297 hypothetical protein
YP_004235758.1	PFAM: Protein of unknown function DUF1304; KEGG: mpt:Mpe_A3500 hypothetical protein
YP_004235759.1	KEGG: ajs:Ajs_3381 outer membrane lipoprotein carrier protein LolA; TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; PFAM: Outer membrane lipoprotein carrier protein LolA
YP_004235760.1	manually curated; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; KEGG: ajs:Ajs_3382 DNA translocase FtsK; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core
YP_004235761.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; manually curated; KEGG: dia:Dtpsy_2721 thioredoxin reductase; TIGRFAM: Thioredoxin reductase
YP_004235762.1	TIGRFAM: Ribosomal protein L28; HAMAP: Ribosomal protein L28; KEGG: dac:Daci_5365 50S ribosomal protein L28; PFAM: Ribosomal protein L28
YP_004235763.1	TIGRFAM: Ribosomal protein L33; HAMAP: Ribosomal protein L33; KEGG: vei:Veis_1756 50S ribosomal protein L33; PFAM: Ribosomal protein L33
YP_004235764.1	KEGG: dac:Daci_5367 transcriptional regulator; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004235765.1	KEGG: vcn:VOLCADRAFT_99828 hypothetical protein
YP_004235766.1	PFAM: Fatty acid desaturase, type 1; KEGG: ajs:Ajs_3386 fatty acid desaturase
YP_004235767.1	PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; KEGG: ajs:Ajs_3387 Fmu (Sun) domain-containing protein
YP_004235768.1	KEGG: bss:BSUW23_03840 pectate lyase; PFAM: Pectate lyase/Amb allergen; SMART: Pectate lyase/Amb allergen; Parallel beta-helix repeat
YP_004235769.1	PFAM: Protein of unknown function DUF1653; KEGG: dac:Daci_5371 hypothetical protein
YP_004235770.1	KEGG: azo:azo3616 putative sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004235771.1	KEGG: azo:azo3615 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004235772.1	KEGG: gca:Galf_2016 EF-Hand, calmodulin
YP_004235773.1	KEGG: dia:Dtpsy_2728 hypothetical protein
YP_004235774.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: dia:Dtpsy_2729 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal
YP_004235775.1	PFAM: Protein of unknown function DUF480; KEGG: ajs:Ajs_3392 hypothetical protein
YP_004235776.1	KEGG: dia:Dtpsy_2731 acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain
YP_004235777.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; KEGG: dia:Dtpsy_2732 acyl-CoA dehydrogenase domain protein
YP_004235778.1	KEGG: dac:Daci_3583 hypothetical protein
YP_004235779.1	PFAM: Glycoside hydrolase, family 18, catalytic domain; KEGG: sna:Snas_6397 chitinase; SMART: Chitinase II
YP_004235780.1	PFAM: Methyltransferase type 12; KEGG: ajs:Ajs_3396 methyltransferase type 12
YP_004235781.1	KEGG: bgl:bglu_2g04400 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235782.1	KEGG: ctt:CtCNB1_0523 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004235783.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dac:Daci_5944 tripartite ATP-independent periplasmic transporter DctQ
YP_004235784.1	KEGG: ctt:CtCNB1_0525 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004235785.1	KEGG: mpt:Mpe_A0688 TonB-dependent receptor protein; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004235786.1	manually curated; KEGG: dac:Daci_2897 hypothetical protein
YP_004235787.1	KEGG: dia:Dtpsy_2733 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease
YP_004235788.1	SMART: Riboflavin kinase; TIGRFAM: Riboflavin kinase/FAD synthetase; KEGG: ajs:Ajs_3398 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase
YP_004235789.1	TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; KEGG: vei:Veis_2109 isoleucyl-tRNA synthetase
YP_004235790.1	TIGRFAM: Peptidase A8, signal peptidase II; KEGG: dia:Dtpsy_2736 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II
YP_004235791.1	manually curated; KEGG: rsl:RPSI07_1845 hypothethical protein
YP_004235792.1	KEGG: vap:Vapar_1266 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004235793.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vap:Vapar_1265 extracellular solute-binding protein family 1
YP_004235794.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_3123 binding-protein-dependent transport systems inner membrane component
YP_004235795.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_1263 binding-protein-dependent transport systems inner membrane component
YP_004235796.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dac:Daci_3121 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235797.1	PFAM: Metallo-dependent phosphatase; KEGG: vap:Vapar_1261 metallophosphoesterase
YP_004235798.1	KEGG: ade:Adeh_0726 hypothetical protein
YP_004235799.1	KEGG: ajs:Ajs_3401 Na/Pi-cotransporter II-related protein; TIGRFAM: Na/Pi co-transporter II-related; PFAM: Na/Pi-cotransporter; PhoU
YP_004235800.1	PFAM: Serine/Threonine acetyltransferase, YopJ; KEGG: rso:RSc0868 YopP/AvrRxv family protein
YP_004235801.1	KEGG: vap:Vapar_1656 hypothetical protein
YP_004235802.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_4358 transcriptional regulator, LysR family
YP_004235803.1	KEGG: vap:Vapar_4359 4-oxalocrotonate tautomerase
YP_004235804.1	KEGG: msl:Msil_0202 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal
YP_004235805.1	PFAM: Bile acid:sodium symporter; KEGG: ajs:Ajs_3402 hypothetical protein
YP_004235806.1	KEGG: rso:RSc1821 transcription regulator protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004235807.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: dac:Daci_1296 Asp/Glu/hydantoin racemase
YP_004235808.1	KEGG: rso:RSc1823 nitrilase protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004235809.1	KEGG: rso:RSc1824 hypothetical protein; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004235810.1	PFAM: Cupin 2, conserved barrel; KEGG: vei:Veis_4214 cupin 2 domain-containing protein
YP_004235811.1	KEGG: rso:RSc1826 salicylyl-CoA 5-hydroxylase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal
YP_004235812.1	PFAM: Thioesterase superfamily; KEGG: rso:RSc1827 putative 4-hydroxybenzoyl-CoA thioesterase protein
YP_004235813.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: rso:RSc1828 putative indolepyruvate oxidoreductase subunit B
YP_004235814.1	PFAM: Major facilitator superfamily MFS-1; KEGG: oan:Oant_4011 major facilitator transporter
YP_004235815.1	KEGG: vap:Vapar_0659 indolepyruvate ferredoxin oxidoreductase; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding
YP_004235816.1	KEGG: rso:RSc1832 transcription regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235817.1	KEGG: rso:RSc1833 putative signal peptide protein
YP_004235818.1	PFAM: Amine oxidase; KEGG: rso:RSc1834 putative transmembrane protein
YP_004235819.1	PFAM: Putative cyclase; KEGG: rso:RSc1835 hypothetical protein
YP_004235820.1	KEGG: rso:RSc1836 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding
YP_004235821.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc1837 putative oxygenase subunit protein
YP_004235822.1	KEGG: rso:RSc1838 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004235823.1	PFAM: NUDIX hydrolase domain; KEGG: ajs:Ajs_3404 NUDIX hydrolase
YP_004235824.1	KEGG: dia:Dtpsy_2740 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004235825.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_3406 hypothetical protein
YP_004235826.1	KEGG: epy:EpC_02970 hypothetical protein
YP_004235827.1	KEGG: bac:BamMC406_2521 hypothetical protein
YP_004235828.1	KEGG: bcm:Bcenmc03_0439 YD repeat-containing protein
YP_004235829.1	KEGG: dac:Daci_0705 hypothetical protein
YP_004235830.1	KEGG: bac:BamMC406_5979 hypothetical protein
YP_004235831.1	manually curated; KEGG: pwa:Pecwa_2693 hypothetical protein
YP_004235832.1	KEGG: pen:PSEEN0559 hypothetical protein
YP_004235833.1	KEGG: bmj:BMULJ_06209 rhs family protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat
YP_004235834.1	KEGG: scl:sce1201 3-oxoacyl-[acyl-carrier-protein] synthase
YP_004235835.1	KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein
YP_004235836.1	PFAM: Protein of unknown function DUF2169; KEGG: pop:POPTR_792104 hypothetical protein
YP_004235837.1	KEGG: gox:GOX1287 biopolymer transport ExbB protein
YP_004235838.1	KEGG: dac:Daci_3868 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Gp5, C-terminal
YP_004235839.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_2742 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004235840.1	PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: dia:Dtpsy_2743 TRAP dicarboxylate transporter-DctP subunit
YP_004235841.1	PFAM: Metallo-dependent phosphatase; KEGG: dac:Daci_3826 metallophosphoesterase
YP_004235842.1	PFAM: Diacylglycerol kinase, catalytic domain; KEGG: dac:Daci_3825 diacylglycerol kinase catalytic region
YP_004235843.1	KEGG: vap:Vapar_4747 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004235844.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_4007 major facilitator superfamily MFS_1
YP_004235845.1	KEGG: ctt:CtCNB1_0339 cold-shock DNA-binding domain protein; PFAM: Protein of unknown function DUF1294; Cold-shock protein, DNA-binding; SMART: Cold shock protein
YP_004235846.1	PFAM: Type IV pilus assembly PilZ; Adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: alv:Alvin_2135 adenylate/guanylate cyclase
YP_004235847.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: vei:Veis_3207 ABC transporter related; PFAM: ABC transporter-like
YP_004235848.1	KEGG: vap:Vapar_0184 hypothetical protein
YP_004235849.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; KEGG: vap:Vapar_4009 UreA ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter-like
YP_004235850.1	KEGG: vei:Veis_3209 inner-membrane translocator; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: ABC transporter permease
YP_004235851.1	KEGG: pol:Bpro_1394 inner-membrane translocator; TIGRFAM: ABC transporter, urea, permease protein, UrtB; PFAM: ABC transporter permease
YP_004235852.1	TIGRFAM: ABC transporter, urea, substrate-binding, UrtA; Twin-arginine translocation pathway, signal sequence; KEGG: vap:Vapar_4012 UreA ABC transporter, UreA binding protein
YP_004235853.1	PFAM: Sodium:dicarboxylate symporter; KEGG: pna:Pnap_0982 C4-dicarboxylate transporter DctA
YP_004235854.1	KEGG: pst:PSPTO_4722 type III effector HopAO1
YP_004235855.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: vap:Vapar_2231 glutathione S-transferase domain protein
YP_004235856.1	KEGG: rso:RSc0128 transcription regulator protein; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type
YP_004235857.1	KEGG: dia:Dtpsy_1028 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like
YP_004235858.1	KEGG: dia:Dtpsy_1027 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like
YP_004235859.1	PFAM: Cytochrome b/b6, N-terminal; KEGG: dia:Dtpsy_1026 cytochrome b561
YP_004235860.1	KEGG: cti:RALTA_B1874 putative transcriptional regulator, IclR; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004235861.1	KEGG: reu:Reut_B4957 hypothetical protein
YP_004235862.1	KEGG: cti:RALTA_B1873 putative CoA-transferase; CaiB/BaiF CoA-transferase family; PFAM: CoA-transferase family III
YP_004235863.1	PFAM: Citrate synthase-like; KEGG: rme:Rmet_4144 citrate synthase
YP_004235864.1	KEGG: kra:Krad_1681 AMP-dependent synthetase and ligase
YP_004235865.1	KEGG: bgl:bglu_2g19460 hypothetical protein
YP_004235866.1	PFAM: Domain of unknown function DUF2846; KEGG: xbo:XBJ1_3192 conserved hypothetical protein; putative exported protein
YP_004235867.1	KEGG: xca:xccb100_2655 hypothetical protein
YP_004235868.1	PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; KEGG: reu:Reut_A2451 carbamoyl-phosphate synthase subunit L; SMART: Biotin carboxylase, C-terminal
YP_004235869.1	SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: Allophanate hydrolase subunit 2; Conserved hypothetical protein CHP00370; KEGG: reu:Reut_A2450 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1
YP_004235870.1	PFAM: Protein of unknown function DUF1445; KEGG: reh:H16_B1759 hypothetical protein
YP_004235871.1	PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; KEGG: dac:Daci_5728 LamB/YcsF family protein
YP_004235872.1	PFAM: Major facilitator superfamily MFS-1; KEGG: reh:H16_B1760 major facilitator superfamily transporter AAHS family protein
YP_004235873.1	KEGG: rfr:Rfer_0874 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004235874.1	KEGG: ajs:Ajs_1106 hypothetical protein
YP_004235875.1	PFAM: Transcription factor, NikR, nickel binding C-terminal; KEGG: azo:azo3128 nickel responsive regulator
YP_004235876.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: rpt:Rpal_5240 TonB-dependent receptor
YP_004235877.1	KEGG: xca:xccb100_1694 hypothetical protein
YP_004235878.1	KEGG: dac:Daci_3346 L-lactate dehydrogenase; PFAM: FMN-dependent dehydrogenase
YP_004235879.1	KEGG: dac:Daci_3345 DNA-binding transcriptional repressor LldR; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004235880.1	KEGG: dac:Daci_3344 L-lactate permease; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004235881.1	PFAM: Protein of unknown function DUF2269, transmembrane; KEGG: azo:azo1827 hypothetical protein
YP_004235882.1	KEGG: pna:Pnap_2975 hypothetical protein
YP_004235883.1	KEGG: ajs:Ajs_1105 hypothetical protein
YP_004235884.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; CHASE4; Diguanylate cyclase, predicted; KEGG: psa:PST_2597 sensory box protein; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS
YP_004235885.1	KEGG: pna:Pnap_0979 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004235886.1	KEGG: pol:Bpro_1353 periplasmic sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain
YP_004235887.1	PFAM: Di-haem cytochrome c peroxidase; KEGG: bmj:BMULJ_04075 putative cytochrome c peroxidase
YP_004235888.1	PFAM: Metallo-dependent phosphatase; KEGG: bmj:BMULJ_04076 putative Ser/Thr protein phosphatase family metallophosphoesterase
YP_004235889.1	TIGRFAM: Urease, alpha/gamma subunit; KEGG: pna:Pnap_0977 urease subunit gamma; PFAM: Urease, alpha/gamma subunit
YP_004235890.1	KEGG: vap:Vapar_4241 HupE/UreJ protein
YP_004235891.1	TIGRFAM: Urease, beta subunit; KEGG: vap:Vapar_4242 urease, beta subunit; PFAM: Urease, beta subunit
YP_004235892.1	TIGRFAM: Urease, alpha subunit; KEGG: vap:Vapar_4243 urease subunit alpha; PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal
YP_004235893.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sbp:Sbal223_0330 GCN5-related N-acetyltransferase
YP_004235894.1	PFAM: UreE urease accessory, N-terminal; UreE urease accessory, C-terminal; KEGG: lch:Lcho_1071 urease accessory protein UreE
YP_004235895.1	PFAM: Urease accessory protein UreF; KEGG: pna:Pnap_0972 urease accessory protein UreF
YP_004235896.1	KEGG: vap:Vapar_4248 urease accessory protein UreG; TIGRFAM: Urease accessory protein UreG; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like
YP_004235897.1	KEGG: pna:Pnap_3334 phage integrase family protein
YP_004235898.1	KEGG: sno:Snov_2078 FRG domain protein; PFAM: FRG domain; SMART: FRG domain
YP_004235899.1	KEGG: pna:Pnap_3333 phage transcriptional regulator, AlpA
YP_004235901.1	KEGG: fre:Franean1_5445 transcriptional regulator
YP_004235903.1	PFAM: Protein of unknown function DUF1486; KEGG: vap:Vapar_2254 protein of unknown function DUF1486
YP_004235904.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: bra:BRADO2620 ABC transporter ATPase; SMART: ATPase, AAA+ type, core
YP_004235905.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2619 putative ABC transporter permease protein
YP_004235906.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2618 ABC transporter permease
YP_004235907.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: bra:BRADO2617 ABC transporter substrate-binding protein
YP_004235908.1	PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bra:BRADO2616 hypothetical protein
YP_004235909.1	KEGG: bra:BRADO2615 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal
YP_004235910.1	KEGG: bra:BRADO2614 omega amino acid--pyruvate transaminase; PFAM: Aminotransferase class-III
YP_004235911.1	KEGG: dac:Daci_5979 hypothetical protein
YP_004235912.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: avn:Avin_35780 TetR family regulatory protein
YP_004235913.1	PFAM: Flavodoxin-like fold; KEGG: rle:RL2909 putative NAD(P)H dehydrogenase
YP_004235914.1	PFAM: Protein of unknown function DUF3606; KEGG: pna:Pnap_2066 hypothetical protein
YP_004235915.1	KEGG: dac:Daci_2959 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004235916.1	PFAM: Flavin-containing monooxygenase-like; Monooxygenase, FAD-binding; KEGG: dac:Daci_2958 flavin-containing monooxygenase, putative
YP_004235917.1	KEGG: dac:Daci_2957 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core
YP_004235918.1	KEGG: psp:PSPPH_2774 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004235919.1	KEGG: bgf:BC1003_2121 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235920.1	KEGG: bgf:BC1003_2120 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004235921.1	PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: lch:Lcho_3797 anti-sigma-factor antagonist
YP_004235922.1	KEGG: rfr:Rfer_0901 CheA signal transduction histidine kinases; PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain
YP_004235923.1	KEGG: xop:PXO_04751 chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; CHASE3; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004235924.1	KEGG: psp:PSPPH_0804 methyl-accepting chemotaxis protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004235925.1	KEGG: azo:azo0405 positive regulator of CheA protein activity; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004235926.1	KEGG: hse:Hsero_0627 response regulator; PFAM: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain; SMART: Diguanylate phosphodiesterase, EAL domain; Signal transduction response regulator, receiver domain
YP_004235927.1	PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: xcv:XCV3024 methylase of chemotaxis methyl-accepting proteins; SMART: MCP methyltransferase, CheR-type
YP_004235928.1	KEGG: rfr:Rfer_0905 CheD, stimulates methylation of MCP proteins; PFAM: Chemoreceptor glutamine deamidase CheD
YP_004235929.1	PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver domain; KEGG: xca:xccb100_1456 chemotaxis-specific methylesterase; SMART: Signal transduction response regulator, receiver domain
YP_004235930.1	PFAM: General secretion pathway, GspH; Prepilin-type cleavage/methylation, N-terminal; KEGG: vei:Veis_2827 Tfp pilus assembly protein
YP_004235931.1	KEGG: vei:Veis_2826 Tfp pilus assembly protein
YP_004235932.1	KEGG: vei:Veis_2825 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein
YP_004235933.1	KEGG: vei:Veis_2824 putative transmembrane protein
YP_004235934.1	KEGG: vei:Veis_2823 putative transmembrane protein
YP_004235935.1	TIGRFAM: Pilus modification type IV, PilV; Prepilin-type cleavage/methylation, N-terminal; KEGG: vei:Veis_2822 type IV pilus modification protein PilV
YP_004235936.1	PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; manually curated; KEGG: vap:Vapar_3108 riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal
YP_004235937.1	KEGG: bpt:Bpet1645 putative secreted protein
YP_004235938.1	PFAM: Protein of unknown function DUF2243, membrane; KEGG: rce:RC1_1742 hypothetical protein
YP_004235939.1	KEGG: dia:Dtpsy_2033 hypothetical protein
YP_004235940.1	PFAM: Protein of unknown function DUF3606; KEGG: mpt:Mpe_B0047 hypothetical protein
YP_004235941.1	PFAM: Isochorismatase-like; KEGG: dia:Dtpsy_0853 isochorismatase hydrolase
YP_004235942.1	PFAM: Protein of unknown function DUF421; KEGG: ajs:Ajs_0919 hypothetical protein
YP_004235943.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: mrd:Mrad2831_3567 histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAC motif; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004235944.1	KEGG: nhl:Nhal_0304 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase
YP_004235945.1	PFAM: Protein of unknown function DUF1295; KEGG: aeh:Mlg_0694 hypothetical protein
YP_004235946.1	KEGG: mei:Msip34_1304 hypothetical protein
YP_004235947.1	PFAM: Protein of unknown function DUF2177, membrane; KEGG: cak:Caul_1552 hypothetical protein
YP_004235948.1	TIGRFAM: Anti-sigma factor ChrR, putative; KEGG: mlo:mlr8089 transcriptional regulator
YP_004235949.1	KEGG: azc:AZC_4109 putative DNA-directed RNA polymerase sigma subunit; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2
YP_004235950.1	PFAM: Amine oxidase; KEGG: mlo:mll8087 hypothetical protein
YP_004235951.1	PFAM: Protein of unknown function DUF1365; KEGG: azc:AZC_2437 hypothetical protein
YP_004235952.1	KEGG: atu:Atu1979 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase
YP_004235953.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mes:Meso_3682 short-chain dehydrogenase/reductase SDR
YP_004235954.1	PFAM: Sporulation-related domain; KEGG: dac:Daci_2035 sporulation domain-containing protein
YP_004235955.1	PFAM: Proteinase inhibitor I78; KEGG: dia:Dtpsy_0855 hypothetical protein
YP_004235956.1	TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; KEGG: dia:Dtpsy_0856 oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB
YP_004235957.1	TIGRFAM: Ham1-like protein; KEGG: dia:Dtpsy_0857 putative deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1-like protein
YP_004235958.1	TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; KEGG: dia:Dtpsy_0858 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2
YP_004235959.1	KEGG: dia:Dtpsy_0859 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like
YP_004235960.1	PFAM: Serine/threonine-protein kinase-like domain; KEGG: dia:Dtpsy_0860 serine/threonine protein kinase
YP_004235961.1	KEGG: dia:Dtpsy_0861 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal
YP_004235962.1	SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; KEGG: dia:Dtpsy_0862 guanylate kinase; PFAM: Guanylate kinase
YP_004235963.1	TIGRFAM: DNA-directed RNA polymerase, omega subunit; HAMAP: DNA-directed RNA polymerase, omega subunit; KEGG: dia:Dtpsy_0863 DNA-directed RNA polymerase subunit omega; PFAM: RNA polymerase, subunit omega/K/RPABC2
YP_004235964.1	SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: dia:Dtpsy_0864 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; TGS; Metal-dependent phosphohydrolase, HD subdomain
YP_004235965.1	KEGG: vap:Vapar_4332 transcription elongation factor GreB; TIGRFAM: Transcription elongation factor GreB; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal
YP_004235966.1	KEGG: dac:Daci_4075 hypothetical protein
YP_004235967.1	KEGG: dac:Daci_4076 hypothetical protein
YP_004235968.1	PFAM: Glycoside hydrolase, family 24; KEGG: cvi:CV_0727 phage-related lysozyme
YP_004235969.1	KEGG: aag:AaeL_AAEL010722 hypothetical protein
YP_004235970.1	KEGG: sat:SYN_02282 putative cytoplasmic protein
YP_004235971.1	KEGG: sen:SACE_3025 PE-PGRS family protein
YP_004235972.1	KEGG: rci:RRC32 hypothetical protein
YP_004235973.1	PFAM: Carbohydrate-binding domain, family 5/12; KEGG: dac:Daci_3256 carbohydrate-binding family V/XII protein
YP_004235974.1	PFAM: Protein of unknown function DUF1799, phage-related; KEGG: dac:Daci_3249 hypothetical protein
YP_004235975.1	PFAM: Protein of unknown function DUF1789; KEGG: dac:Daci_3248 hypothetical protein
YP_004235976.1	PFAM: Phage tail protein 3; KEGG: bav:BAV1470 major tail protein
YP_004235977.1	KEGG: vap:Vapar_2469 hypothetical protein
YP_004235978.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: bvi:Bcep1808_1159 putative phage repressor
YP_004235979.1	manually curated; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; KEGG: ctt:CtCNB1_0496 two component transcriptional regulator, LuxR; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain
YP_004235980.1	KEGG: ajs:Ajs_3231 hypothetical protein
YP_004235981.1	KEGG: dia:Dtpsy_0847 heat-inducible transcription repressor; TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal; Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain
YP_004235982.1	PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; KEGG: vei:Veis_1051 NAD(+)/NADH kinase family protein
YP_004235983.1	KEGG: ajs:Ajs_0903 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC
YP_004235984.1	KEGG: vei:Veis_1053 hypothetical protein
YP_004235985.1	TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; KEGG: dac:Daci_5427 A/G-specific adenine glycosylase; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif
YP_004235986.1	KEGG: dia:Dtpsy_0829 hypothetical protein
YP_004235987.1	SMART: DNA glycosylase/AP lyase, catalytic domain; TIGRFAM: DNA glycosylase/AP lyase; KEGG: ajs:Ajs_0899 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase
YP_004235988.1	SMART: Tetratricopeptide repeat; KEGG: ajs:Ajs_0898 TPR repeat-containing protein
YP_004235989.1	PFAM: Outer membrane lipoprotein LolB; KEGG: dac:Daci_5431 outer membrane lipoprotein LolB
YP_004235990.1	TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: ajs:Ajs_0896 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal
YP_004235991.1	TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: vei:Veis_0951 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase
YP_004235992.1	KEGG: vei:Veis_0950 50S ribosomal protein L25/general stress protein Ctc; TIGRFAM: Ribosomal protein L25, long-form; PFAM: Ribosomal protein L25, short-form
YP_004235993.1	TIGRFAM: Peptidyl-tRNA hydrolase; KEGG: dia:Dtpsy_0822 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase
YP_004235994.1	KEGG: pol:Bpro_1283 4Fe-4S ferredoxin, iron-sulfur binding
YP_004235995.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_5437 binding-protein-dependent transport systems inner membrane component
YP_004235996.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_0136 binding-protein-dependent transport systems inner membrane component
YP_004235997.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: dia:Dtpsy_0818 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004235998.1	PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: dia:Dtpsy_0817 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004235999.1	PFAM: Helix-turn-helix type 3; KEGG: ctt:CtCNB1_2621 hypothetical protein
YP_004236000.1	PFAM: HipA-like, C-terminal; HipA-like, N-terminal; KEGG: ctt:CtCNB1_2622 hypothetical protein
YP_004236001.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: dia:Dtpsy_0816 extracellular solute-binding protein family 5
YP_004236002.1	KEGG: dia:Dtpsy_0813 hypothetical protein
YP_004236003.1	PFAM: HipA-like, N-terminal; HipA-like, C-terminal; KEGG: lhk:LHK_02578 hypothetical protein
YP_004236004.1	TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: hse:Hsero_1077 NADP-dependent succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004236005.1	SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: Glucarate dehydratase; KEGG: vap:Vapar_1731 glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004236006.1	KEGG: ajs:Ajs_1992 hypothetical protein
YP_004236007.1	PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: vap:Vapar_4084 transposase IS116/IS110/IS902 family protein
YP_004236008.1	KEGG: mpt:Mpe_A0968 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI
YP_004236009.1	PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: rsl:RPSI07_3166 type III effector RipB protein
YP_004236010.1	KEGG: ppw:PputW619_3728 hypothetical protein
YP_004236011.1	KEGG: rfr:Rfer_1303 hypothetical protein
YP_004236012.1	PFAM: Drug/metabolite transporter; KEGG: dac:Daci_5448 hypothetical protein
YP_004236013.1	PFAM: BLUF; KEGG: ajs:Ajs_0880 BLUF domain-containing protein
YP_004236014.1	KEGG: xtr:100496140 GTP cyclohydrolase 1-like; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase
YP_004236015.1	KEGG: dia:Dtpsy_0807 phospholipase D/transphosphatidylase
YP_004236016.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: dia:Dtpsy_0806 endonuclease/exonuclease/phosphatase
YP_004236017.1	KEGG: rfr:Rfer_1420 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004236018.1	PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_0805 NUDIX hydrolase
YP_004236019.1	PFAM: CheW-like protein; KEGG: azo:azo2282 hypothetical protein
YP_004236020.1	PFAM: Curli production assembly/transport component CsgG; KEGG: dac:Daci_5452 hypothetical protein
YP_004236021.1	TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: dia:Dtpsy_0803 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); GAD domain; Nucleic acid binding, OB-fold, tRNA/helicase-type
YP_004236022.1	PFAM: Protein of unknown function DUF502; KEGG: dia:Dtpsy_0802 protein of unknown function DUF502
YP_004236023.1	TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: ngr:NAEGRDRAFT_55039 hypothetical protein; SMART: Regulatory protein, FmdB, putative
YP_004236024.1	PFAM: Sodium/solute symporter; KEGG: vap:Vapar_4125 Na+/solute symporter
YP_004236025.1	KEGG: dia:Dtpsy_0799 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: Probable ubiquinone biosynthesis protein UbiB; PFAM: ABC-1
YP_004236026.1	KEGG: dac:Daci_5459 hypothetical protein
YP_004236027.1	KEGG: dia:Dtpsy_0797 import inner membrane translocase subunit Tim44; PFAM: Membrane transporter, Tim44-related/Ribosomal protein L45; SMART: Membrane transporter, Tim44-related/Ribosomal protein L45
YP_004236028.1	KEGG: dia:Dtpsy_0796 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: UbiE/COQ5 methyltransferase; PFAM: UbiE/COQ5 methyltransferase
YP_004236029.1	PFAM: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal; KEGG: dac:Daci_5462 hypothetical protein
YP_004236030.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: psp:PSPPH_2692 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted
YP_004236031.1	PFAM: Histidine triad (HIT) protein; KEGG: ajs:Ajs_0865 histidine triad (HIT) protein
YP_004236032.1	PFAM: Protein of unknown function DUF3683; Protein of unknown function DUF3400; Cysteine-rich domain; FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: dac:Daci_5464 FAD linked oxidase domain-containing protein
YP_004236033.1	KEGG: ctt:CtCNB1_1647 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236034.1	KEGG: ajs:Ajs_0863 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Amino acid-binding ACT; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004236035.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vap:Vapar_4134 extracellular solute-binding protein family 1
YP_004236036.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_4135 binding-protein-dependent transport systems inner membrane component
YP_004236037.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0855 binding-protein-dependent transport systems inner membrane component
YP_004236038.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: dia:Dtpsy_0788 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236039.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rpi:Rpic_0148 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004236040.1	KEGG: dia:Dtpsy_0787 glycerophosphodiester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase
YP_004236041.1	KEGG: dac:Daci_1600 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236042.1	PFAM: Mechanosensitive ion channel MscS; Protein of unknown function DUF3772; KEGG: dac:Daci_5470 MscS mechanosensitive ion channel
YP_004236043.1	KEGG: pol:Bpro_3470 hypothetical protein
YP_004236044.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_4883 transcriptional regulator, LysR family
YP_004236045.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_4882 major facilitator superfamily MFS_1
YP_004236046.1	KEGG: dia:Dtpsy_0782 hypothetical protein
YP_004236047.1	KEGG: dia:Dtpsy_0781 glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
YP_004236048.1	TIGRFAM: Peptide chain release factor 1; PFAM: Peptide chain release factor; Peptide chain release factor class I/class II; KEGG: dia:Dtpsy_0780 peptide chain release factor 1; SMART: Peptide chain release factor
YP_004236049.1	KEGG: dia:Dtpsy_0779 methyltransferase type 12; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small
YP_004236050.1	KEGG: vei:Veis_1556 glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; PFAM: Glutaredoxin
YP_004236051.1	KEGG: vei:Veis_1557 ATPase central domain-containing protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004236052.1	PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: dia:Dtpsy_0777 protein of unknown function DUF21
YP_004236053.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: ajs:Ajs_0847 lytic transglycosylase, catalytic
YP_004236054.1	KEGG: dia:Dtpsy_0775 prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding
YP_004236055.1	PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_0774 dinucleoside polyphosphate hydrolase
YP_004236056.1	TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; KEGG: ajs:Ajs_0844 gamma-glutamyl kinase; SMART: Pseudouridine synthase/archaeosine transglycosylase
YP_004236057.1	KEGG: dia:Dtpsy_0772 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related
YP_004236058.1	KEGG: dia:Dtpsy_0771 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27
YP_004236059.1	TIGRFAM: Ribosomal protein L21; HAMAP: Ribosomal protein L21; KEGG: dia:Dtpsy_0770 50S ribosomal protein L21; PFAM: Ribosomal protein L21
YP_004236060.1	manually curated; KEGG: dia:Dtpsy_0769 polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004236061.1	TIGRFAM: ATPase, type IV, pilus assembly, PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: ajs:Ajs_0805 type IV-A pilus assembly ATPase PilB; SMART: ATPase, AAA+ type, core
YP_004236062.1	PFAM: Type II secretion system F domain; KEGG: ajs:Ajs_0804 type II secretion system protein
YP_004236063.1	KEGG: dac:Daci_5490 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV
YP_004236064.1	PFAM: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; KEGG: ajs:Ajs_0802 dephospho-CoA kinase
YP_004236065.1	PFAM: Uncharacterised protein family UPF0289; KEGG: dia:Dtpsy_0764 hypothetical protein
YP_004236066.1	PFAM: Uncharacterised protein family, zinc-binding; KEGG: dia:Dtpsy_0763 protein of unknown function DUF329
YP_004236067.1	PFAM: NUDIX hydrolase domain; KEGG: dia:Dtpsy_0762 NUDIX hydrolase
YP_004236068.1	PFAM: Domain of unknown function DUF815; KEGG: dia:Dtpsy_0761 protein of unknown function DUF815
YP_004236069.1	TIGRFAM: Arginine biosynthesis protein ArgJ; KEGG: ajs:Ajs_0797 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: Arginine biosynthesis protein ArgJ
YP_004236070.1	TIGRFAM: SecA protein; PFAM: SecA DEAD-like, N-terminal; SEC-C motif; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; KEGG: dia:Dtpsy_0759 preprotein translocase subunit SecA; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain
YP_004236071.1	PFAM: Peptidase M23; KEGG: vei:Veis_3929 peptidase M23B
YP_004236072.1	PFAM: Protein of unknown function DUF721/UPF0232; KEGG: dia:Dtpsy_0757 hypothetical protein
YP_004236073.1	PFAM: Stringent starvation protein B; KEGG: vap:Vapar_1204 stringent starvation protein B
YP_004236074.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: vei:Veis_3932 glutathione S-transferase domain-containing protein
YP_004236075.1	PFAM: Cytochrome c1; KEGG: ajs:Ajs_0791 cytochrome c1
YP_004236076.1	PFAM: Cytochrome b/b6, C-terminal; Cytochrome b/b6, N-terminal; KEGG: dia:Dtpsy_0753 cytochrome b/b6 domain protein
YP_004236077.1	TIGRFAM: Ubiquinol-cytochrome c reductase, iron-sulphur subunit; KEGG: ajs:Ajs_0789 ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal
YP_004236078.1	KEGG: dia:Dtpsy_0751 large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel
YP_004236079.1	TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; KEGG: ajs:Ajs_0787 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA
YP_004236080.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Lipoprotein releasing system, ATP-binding protein; KEGG: dia:Dtpsy_2754 lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter-like
YP_004236081.1	KEGG: dia:Dtpsy_2755 lipoprotein releasing system, transmembrane protein, LolC/E family; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Domain of unknown function DUF214, ABC transporter permease
YP_004236082.1	KEGG: dia:Dtpsy_2757 hypothetical protein
YP_004236083.1	KEGG: dia:Dtpsy_2758 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1
YP_004236084.1	KEGG: ajs:Ajs_3430 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236085.1	KEGG: dia:Dtpsy_2763 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal
YP_004236086.1	KEGG: dia:Dtpsy_2764 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal
YP_004236087.1	KEGG: dac:Daci_5413 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236088.1	PFAM: Peptidase M50; KEGG: dac:Daci_5414 peptidase M50
YP_004236089.1	TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: dia:Dtpsy_2771 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib
YP_004236090.1	KEGG: ctt:CtCNB1_3137 NADPH-dependent FMN reductase; TIGRFAM: Arsenate resistance ArsH; PFAM: NADPH-dependent FMN reductase
YP_004236091.1	TIGRFAM: Arsenate reductase; KEGG: dac:Daci_0491 arsenate reductase; PFAM: Arsenate reductase-like
YP_004236092.1	KEGG: vap:Vapar_1962 putative transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004236093.1	KEGG: ebr:ECB_03448 RhsA element core protein RshA; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat
YP_004236094.1	KEGG: cse:Cseg_1697 piwi domain-containing protein
YP_004236095.1	KEGG: psa:PST_3197 hypothetical protein
YP_004236097.1	KEGG: xal:XALc_0844 hypothetical protein
YP_004236098.1	SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: xal:XALc_0845 hypothetical protein
YP_004236099.1	KEGG: xal:XALc_0846 putative transaminase protein; PFAM: Aminotransferase class-III
YP_004236100.1	KEGG: xal:XALc_0847 hypothetical protein
YP_004236101.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: xal:XALc_0848 hypothetical protein
YP_004236102.1	KEGG: nmu:Nmul_A2305 hypothetical protein
YP_004236103.1	KEGG: vap:Vapar_2841 hypothetical protein
YP_004236104.1	PFAM: 4'-phosphopantetheinyl transferase; KEGG: dac:Daci_4758 4'-phosphopantetheinyl transferase
YP_004236105.1	KEGG: vap:Vapar_3740 L-lysine 6-monooxygenase (NADPH)
YP_004236106.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Cyclic peptide transporter; KEGG: vap:Vapar_3736 cyclic peptide transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane domain
YP_004236107.1	PFAM: FhuF/siderophore biosynthesis protein; KEGG: vap:Vapar_3737 ferric iron reductase
YP_004236108.1	PFAM: Formyl transferase, N-terminal; KEGG: vap:Vapar_3738 hypothetical protein
YP_004236109.1	PFAM: Siderophore biosynthesis protein, conserved domain; KEGG: vap:Vapar_3739 hypothetical protein
YP_004236110.1	KEGG: xac:XAC2185 ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004236111.1	TIGRFAM: Amino acid adenylation; KEGG: vap:Vapar_3742 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Thioesterase; Phosphopantetheine-binding
YP_004236112.1	TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: vap:Vapar_3743 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004236113.1	KEGG: vap:Vapar_3744 amino acid adenylation domain protein; TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004236114.1	PFAM: Beta-ketoacyl synthase, N-terminal; Polyketide synthase, KR; Beta-ketoacyl synthase, C-terminal; Phosphopantetheine-binding; Acyl transferase; KEGG: vap:Vapar_3745 KR domain protein; SMART: Polyketide synthase, acyl transferase domain; Polyketide synthase/Fatty acid synthase, KR
YP_004236115.1	SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: vap:Vapar_3746 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding
YP_004236116.1	PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: vap:Vapar_3747 taurine catabolism dioxygenase TauD/TfdA
YP_004236117.1	PFAM: Thioesterase; KEGG: dac:Daci_4759 thioesterase
YP_004236118.1	KEGG: dac:Daci_4760 MbtH domain-containing protein; PFAM: MbtH-like protein; SMART: MbtH-like protein
YP_004236119.1	KEGG: vap:Vapar_3751 anti-FecI sigma factor, FecR
YP_004236120.1	KEGG: vap:Vapar_3752 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2
YP_004236121.1	PFAM: Protein of unknown function DUF3734; Patatin/Phospholipase A2-related; KEGG: vap:Vapar_2219 patatin
YP_004236122.1	KEGG: acr:Acry_0495 acetoacetate decarboxylase; PFAM: Acetoacetate decarboxylase
YP_004236123.1	TIGRFAM: 3-hydroxybutyrate dehydrogenase; KEGG: vap:Vapar_2220 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004236124.1	KEGG: vei:Veis_1304 porin
YP_004236125.1	KEGG: dac:Daci_5628 hypothetical protein
YP_004236126.1	KEGG: vap:Vapar_5963 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
YP_004236127.1	KEGG: dac:Daci_5630 hypothetical protein
YP_004236128.1	KEGG: dac:Daci_5631 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase
YP_004236129.1	KEGG: vap:Vapar_5966 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal
YP_004236130.1	KEGG: dac:Daci_5633 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004236131.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_5968 transcriptional regulator, LysR family
YP_004236132.1	KEGG: rpf:Rpic12D_4396 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004236133.1	KEGG: rpf:Rpic12D_4397 hypothetical protein
YP_004236134.1	PFAM: Domain of unknown function DUF2760; KEGG: app:CAP2UW1_2630 hypothetical protein
YP_004236135.1	KEGG: reh:H16_A1624 molecular chaperone
YP_004236136.1	PFAM: Protein of unknown function DUF3731; Heat shock protein 70; KEGG: cti:RALTA_A1538 putative chaperone heat-shock protein
YP_004236137.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004236138.1	PFAM: Chloride channel, voltage gated; KEGG: rpf:Rpic12D_3914 chloride channel core
YP_004236139.1	KEGG: dac:Daci_0299 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: YD repeat; RHS protein
YP_004236140.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D
YP_004236141.1	KEGG: dac:Daci_3015 peptidase M16 domain-containing protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_004236142.1	PFAM: Fatty acid hydroxylase; KEGG: rpi:Rpic_3502 fatty acid hydroxylase
YP_004236143.1	KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004236144.1	KEGG: dac:Daci_4388 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004236145.1	KEGG: dac:Daci_4387 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004236146.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_3883 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004236147.1	SMART: ATPase, AAA+ type, core; TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtE; KEGG: rle:pRL120441 putative ABC transporter component; PFAM: ABC transporter-like
YP_004236148.1	TIGRFAM: ABC transporter, urea, ATP-binding protein, UrtD; PFAM: ABC transporter-like; KEGG: rle:pRL120442 putative ATP-binding component of ABC transporter; SMART: ATPase, AAA+ type, core
YP_004236149.1	KEGG: bbt:BBta_1955 putative branched-chain amino acid ABC transporter, permease protein; TIGRFAM: ABC transporter, urea, permease protein, UrtC; PFAM: ABC transporter permease
YP_004236150.1	PFAM: ABC transporter permease; KEGG: rle:pRL120444 putative permease component of ABC transporter
YP_004236151.1	KEGG: atu:Atu5531 ABC transporter, substrate binding protein
YP_004236152.1	PFAM: ANTAR; KEGG: atu:Atu5530 two component response regulator
YP_004236153.1	PFAM: Extracellular ligand-binding receptor; KEGG: rle:pRL120447 putative transcriptional regulator
YP_004236154.1	KEGG: pat:Patl_2583 hypothetical protein
YP_004236155.1	KEGG: gpb:HDN1F_05340 hypothetical protein
YP_004236156.1	TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; PAS fold; Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_1884 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS; PAC motif
YP_004236157.1	KEGG: cyn:Cyan7425_2638 hypothetical protein
YP_004236158.1	manually curated; KEGG: pfs:PFLU0170 hypothetical protein
YP_004236159.1	PFAM: Domain of unknown function DUF87; KEGG: pfs:PFLU0171 hypothetical protein
YP_004236160.1	KEGG: mms:mma_0006 hypothetical protein
YP_004236161.1	PFAM: Transposase IS3/IS911family; KEGG: ctt:CtCNB1_3809 transposase IS3/IS911
YP_004236162.1	KEGG: ctt:CtCNB1_4037 transposase; manually curated; PFAM: Integrase, catalytic core
YP_004236163.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004236164.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4777 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004236165.1	KEGG: hse:Hsero_3499 NADPH:quinone oxidoreductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004236166.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: hse:Hsero_3498 TetR family transcription regulator protein
YP_004236167.1	TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: ajs:Ajs_3445 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal
YP_004236168.1	PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: pol:Bpro_0952 threonine dehydratase
YP_004236169.1	KEGG: ajs:Ajs_3446 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core
YP_004236170.1	PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: dia:Dtpsy_2774 protein of unknown function DUF21
YP_004236171.1	TIGRFAM: LytB protein; KEGG: dia:Dtpsy_2775 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein
YP_004236172.1	PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: ctt:CtCNB1_3820 peptidylprolyl isomerase, FKBP-type
YP_004236173.1	KEGG: dia:Dtpsy_2777 DNA repair protein RadC; TIGRFAM: Uncharacterised protein family UPF0758; PFAM: Uncharacterised protein family UPF0758
YP_004236174.1	KEGG: dia:Dtpsy_2778 hypothetical protein
YP_004236175.1	KEGG: pag:PLES_28071 putative transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004236176.1	PFAM: Cupin 2, conserved barrel; KEGG: pae:PA2490 hypothetical protein
YP_004236177.1	KEGG: dia:Dtpsy_2779 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal
YP_004236178.1	KEGG: rme:Rmet_5129 putative two-component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004236179.1	KEGG: rru:Rru_A3187 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236180.1	PFAM: Peptidase M4, propeptide, PepSY; KEGG: rsk:RSKD131_3677 hypothetical protein
YP_004236181.1	KEGG: smt:Smal_3763 hypothetical protein
YP_004236182.1	KEGG: ajs:Ajs_3453 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase
YP_004236183.1	KEGG: dac:Daci_4483 type VI secretion system Vgr family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V
YP_004236184.1	KEGG: rec:RHECIAT_PC0000957 hypothetical protein
YP_004236185.1	KEGG: afw:Anae109_3917 TPR repeat-containing protein
YP_004236186.1	PFAM: Protein of unknown function DUF2169; KEGG: hch:HCH_07058 hypothetical protein
YP_004236187.1	KEGG: mxa:MXAN_1306 hypothetical protein
YP_004236188.1	KEGG: esa:ESA_03913 hypothetical protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; CMP/dCMP deaminase, zinc-binding; YD repeat
YP_004236189.1	KEGG: ajs:Ajs_3454 globin; manually curated; PFAM: Globin, truncated bacterial-like
YP_004236190.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dia:Dtpsy_2785 protein of unknown function DUF214
YP_004236191.1	KEGG: pna:Pnap_1313 hypothetical protein
YP_004236192.1	TIGRFAM: Formate dehydrogenase, subunit FdhD; HAMAP: Formate dehydrogenase, subunit FdhD; KEGG: xtr:100490638 protein fdhD homolog; PFAM: Formate dehydrogenase, subunit FdhD
YP_004236193.1	TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; KEGG: dac:Daci_4813 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain
YP_004236194.1	KEGG: bge:BC1002_3523 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236195.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pnu:Pnuc_1334 major facilitator transporter
YP_004236196.1	PFAM: ATPase-like, ParA/MinD; Domain of unknown function DUF59; KEGG: dia:Dtpsy_2800 protein of unknown function DUF59
YP_004236197.1	PFAM: Restriction endonuclease, type IV-like, Mrr; KEGG: dia:Dtpsy_2804 restriction endonuclease
YP_004236198.1	PFAM: Patatin/Phospholipase A2-related; KEGG: vei:Veis_4479 patatin
YP_004236199.1	KEGG: bgl:bglu_2g01330 pyruvate dehydrogenase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain
YP_004236200.1	TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; KEGG: dac:Daci_1843 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain
YP_004236201.1	KEGG: dac:Daci_1842 hypothetical protein
YP_004236202.1	PFAM: Protein of unknown function DUF161; KEGG: ctt:CtCNB1_3858 hypothetical protein
YP_004236203.1	KEGG: ajs:Ajs_3490 putative lipoprotein
YP_004236204.1	KEGG: ajs:Ajs_3491 hypothetical protein
YP_004236205.1	KEGG: dia:Dtpsy_2815 chromosome segregation and condensation protein ScpA; HAMAP: Prokaryotic chromosome segregation/condensation protein ScpA; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA
YP_004236206.1	TIGRFAM: L-aspartate oxidase; KEGG: ajs:Ajs_3493 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal
YP_004236207.1	TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: dac:Daci_1834 adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III
YP_004236208.1	KEGG: dac:Daci_1833 dethiobiotin synthase; TIGRFAM: Dethiobiotin synthase; PFAM: Cobyrinic acid a,c-diamide synthase
YP_004236209.1	TIGRFAM: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; KEGG: dac:Daci_1832 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII
YP_004236210.1	PFAM: Radical SAM; KEGG: vap:Vapar_4095 hypothetical protein
YP_004236211.1	PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: ctt:CtCNB1_3864 6-pyruvoyl tetrahydropterin synthase and
YP_004236212.1	PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: dia:Dtpsy_2818 5-carboxymethyl-2-hydroxymuconate isomerase
YP_004236213.1	KEGG: rsc:RCFBP_11870 putative type III effector protein
YP_004236214.1	KEGG: rsl:RPSI07_1894 hypothetical protein
YP_004236215.1	TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: vei:Veis_2835 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal; Aminotransferase, class IV
YP_004236216.1	TIGRFAM: Quinolinate synthetase A; KEGG: dia:Dtpsy_2820 quinolinate synthetase; PFAM: Quinolinate synthetase A
YP_004236217.1	TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: dia:Dtpsy_2821 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal
YP_004236218.1	TIGRFAM: Ketopantoate hydroxymethyltransferase; KEGG: dia:Dtpsy_2822 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase
YP_004236219.1	KEGG: dia:Dtpsy_2823 pantoate--beta-alanine ligase; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; PFAM: Pantoate-beta-alanine ligase
YP_004236220.1	PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; KEGG: ajs:Ajs_3501 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
YP_004236221.1	TIGRFAM: Bacterial protein export chaperone SecB; HAMAP: Bacterial protein export chaperone SecB; KEGG: dia:Dtpsy_2825 preprotein translocase subunit SecB; PFAM: Bacterial protein export chaperone SecB
YP_004236222.1	KEGG: dia:Dtpsy_2826 glutaredoxin 3; TIGRFAM: Glutaredoxin, GrxC; PFAM: Glutaredoxin
YP_004236223.1	KEGG: ajs:Ajs_3504 rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like
YP_004236224.1	SMART: Histidine phosphatase superfamily, clade-1; TIGRFAM: Phosphoglycerate mutase 1; KEGG: dia:Dtpsy_2828 phosphoglyceromutase; PFAM: Histidine phosphatase superfamily, clade-1
YP_004236225.1	TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: dia:Dtpsy_2829 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF
YP_004236226.1	PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: ajs:Ajs_3507 UBA/ThiF-type NAD/FAD binding protein
YP_004236227.1	KEGG: dia:Dtpsy_2831 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004236228.1	KEGG: dia:Dtpsy_2832 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004236229.1	KEGG: dia:Dtpsy_2833 histidine kinase; PFAM: CHASE3; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004236230.1	KEGG: dia:Dtpsy_2834 hypothetical protein; HAMAP: Protein of unknown function DUF1328; PFAM: Protein of unknown function DUF1328
YP_004236231.1	KEGG: dia:Dtpsy_2835 hypothetical protein
YP_004236232.1	PFAM: Ferritin/Dps protein; KEGG: dia:Dtpsy_2836 ferritin Dps family protein
YP_004236233.1	KEGG: dia:Dtpsy_2837 transport-associated; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria
YP_004236234.1	PFAM: Uncharacterised conserved protein UCP012641; KEGG: vei:Veis_0030 hypothetical protein
YP_004236235.1	TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; KEGG: vei:Veis_4765 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase
YP_004236236.1	TIGRFAM: RNA methyltransferase, RsmD; KEGG: ajs:Ajs_3517 putative methyltransferase; PFAM: RNA methyltransferase, RsmD
YP_004236237.1	PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: dia:Dtpsy_2841 peptidase M16 domain protein
YP_004236238.1	KEGG: dia:Dtpsy_2842 peptidase M16 domain protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal
YP_004236239.1	SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; manually curated; KEGG: dia:Dtpsy_2843 signal recognition particle-docking protein FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle
YP_004236240.1	KEGG: bmj:BMULJ_04922 putative short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004236241.1	PFAM: Protein of unknown function DUF849, prokaryotic; KEGG: bpl:BURPS1106A_A1839 hypothetical protein
YP_004236242.1	PFAM: Haemerythrin/HHE cation-binding motif; KEGG: vap:Vapar_2007 hemerythrin HHE cation binding domain protein
YP_004236243.1	KEGG: dac:Daci_4877 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236244.1	KEGG: ctt:CtCNB1_0413 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein
YP_004236245.1	PFAM: Multiple antibiotic resistance (MarC)-related; KEGG: bbr:BB2602 putative multiple antibiotic resistance protein
YP_004236246.1	KEGG: vei:Veis_4476 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma factor RpoH, proteobacteria; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 1.2
YP_004236247.1	KEGG: dia:Dtpsy_2846 hypothetical protein
YP_004236248.1	KEGG: dac:Daci_2808 hypothetical protein
YP_004236249.1	KEGG: dia:Dtpsy_2847 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain
YP_004236250.1	PFAM: Copper chaperone SCO1/SenC; KEGG: ajs:Ajs_3526 electron transport protein SCO1/SenC
YP_004236251.1	KEGG: dia:Dtpsy_2850 protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase
YP_004236252.1	PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: dia:Dtpsy_2851 cytochrome oxidase assembly
YP_004236253.1	KEGG: ajs:Ajs_3529 hypothetical protein
YP_004236254.1	KEGG: ajs:Ajs_3530 putative transmembrane cytochrome oxidase
YP_004236255.1	PFAM: Cytochrome c oxidase, subunit III; KEGG: ajs:Ajs_3532 cytochrome c oxidase, subunit III
YP_004236256.1	PFAM: Protein of unknown function DUF2970; KEGG: dac:Daci_1678 putative transmembrane protein
YP_004236257.1	PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: dia:Dtpsy_2857 cytochrome c oxidase assembly protein
YP_004236258.1	KEGG: ajs:Ajs_3535 hypothetical protein
YP_004236259.1	KEGG: dia:Dtpsy_2859 cytochrome c oxidase, subunit I; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I
YP_004236260.1	KEGG: dia:Dtpsy_2860 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c, class I
YP_004236261.1	KEGG: ajs:Ajs_3539 biotin synthesis protein BioC
YP_004236262.1	PFAM: Phosphoribosyltransferase; KEGG: ajs:Ajs_3540 ComF family protein
YP_004236263.1	PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: dia:Dtpsy_2864 tRNA/rRNA methyltransferase (SpoU)
YP_004236264.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0259 LysR family transcriptional regulator
YP_004236265.1	KEGG: dac:Daci_1669 hypothetical protein
YP_004236266.1	KEGG: vei:Veis_0438 dehydratase; PFAM: MaoC-like dehydratase
YP_004236267.1	PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: pol:Bpro_1239 cobyrinic acid a,c-diamide synthase
YP_004236268.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3544 lysine exporter protein LysE/YggA
YP_004236269.1	KEGG: dia:Dtpsy_2868 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: K+/H+ exchanger; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal
YP_004236270.1	KEGG: bur:Bcep18194_B1559 hypothetical protein; PFAM: WGR domain; SMART: WGR domain
YP_004236271.1	KEGG: bur:Bcep18194_B1555 ATPase AAA_5; PFAM: ATPase, AAA-5; SMART: ATPase, AAA+ type, core
YP_004236272.1	KEGG: bur:Bcep18194_B1556 hypothetical protein
YP_004236273.1	KEGG: bur:Bcep18194_B1557 VWA containing CoxE-like protein; PFAM: vWA containing CoxE-like; SMART: von Willebrand factor, type A
YP_004236274.1	KEGG: bur:Bcep18194_B1558 hypothetical protein
YP_004236275.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gym:GYMC10_3745 GCN5-related N-acetyltransferase
YP_004236276.1	PFAM: Cytochrome b/b6, N-terminal; KEGG: psb:Psyr_3279 cytochrome b561
YP_004236277.1	KEGG: xac:XAC2611 hypothetical protein
YP_004236278.1	KEGG: dac:Daci_1859 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004236279.1	PFAM: Major facilitator superfamily MFS-1; KEGG: dac:Daci_1856 major facilitator transporter
YP_004236280.1	KEGG: dac:Daci_1855 gluconate 2-dehydrogenase (acceptor); PFAM: Cytochrome c, class I
YP_004236281.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: dac:Daci_1854 2Fe-2S iron-sulfur cluster binding domain-containing protein
YP_004236282.1	KEGG: dac:Daci_1853 monooxygenase FAD-binding; PFAM: FAD dependent oxidoreductase
YP_004236283.1	PFAM: Asp/Glu/hydantoin racemase; KEGG: dac:Daci_1852 Asp/Glu/hydantoin racemase
YP_004236284.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_1851 alpha/beta hydrolase fold
YP_004236285.1	KEGG: dac:Daci_1850 hypothetical protein
YP_004236286.1	PFAM: Isochorismatase-like; KEGG: dac:Daci_1849 isochorismatase hydrolase
YP_004236287.1	KEGG: dac:Daci_1848 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding
YP_004236288.1	PFAM: XdhC- CoxI; KEGG: lch:Lcho_4304 hypothetical protein
YP_004236289.1	KEGG: xcv:XCV0138 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004236290.1	KEGG: sli:Slin_3759 NmrA family protein
YP_004236291.1	PFAM: Glycoside hydrolase 15-related; KEGG: rlt:Rleg2_4753 glycoside hydrolase 15-related
YP_004236292.1	KEGG: xtr:100498134 protein bugT-like
YP_004236293.1	TIGRFAM: Muconolactone delta-isomerase; KEGG: rme:Rmet_4677 muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase
YP_004236294.1	PFAM: Short chain fatty acid transporter; KEGG: rme:Rmet_4680 short chain fatty acid transporter
YP_004236295.1	KEGG: ctt:CtCNB1_0681 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004236296.1	PFAM: YCII-related; KEGG: bpt:Bpet4531 YciI-like protein
YP_004236297.1	PFAM: Putative cyclase; KEGG: acr:Acry_2893 hypothetical protein
YP_004236298.1	TIGRFAM: 3-oxoadipate enol-lactonase; KEGG: dia:Dtpsy_2870 3-oxoadipate enol-lactonase; PFAM: Alpha/beta hydrolase fold-1
YP_004236299.1	TIGRFAM: Beta-ketoadipyl CoA thiolase; Thiolase; KEGG: xtr:100497976 probable succinyl-CoA:3-ketoacid-coenzyme A transferase, mitochondrial-like; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004236300.1	SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: ctt:CtCNB1_0684 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase
YP_004236301.1	SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: ctt:CtCNB1_0685 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase
YP_004236302.1	TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: ajs:Ajs_3551 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal
YP_004236303.1	KEGG: scl:sce7895 putative secreted protein
YP_004236304.1	KEGG: xoo:XOO0097 hypothetical protein
YP_004236305.1	PFAM: Protein of unknown function DUF1841; KEGG: ajs:Ajs_3553 hypothetical protein
YP_004236306.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; HAMP linker domain; Cache; Diguanylate cyclase, predicted; KEGG: dac:Daci_3824 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain
YP_004236307.1	PFAM: Cytochrome c, class I; KEGG: dia:Dtpsy_2878 cytochrome c class I
YP_004236308.1	KEGG: dac:Daci_1661 ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core
YP_004236309.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dia:Dtpsy_2881 GCN5-related N-acetyltransferase
YP_004236310.1	PFAM: vWA containing CoxE-like; KEGG: ajs:Ajs_3559 hypothetical protein
YP_004236311.1	PFAM: Bacterial surface antigen (D15); KEGG: dia:Dtpsy_2883 surface antigen (D15)
YP_004236312.1	PFAM: Protein of unknown function DUF490; KEGG: ajs:Ajs_3561 hypothetical protein
YP_004236313.1	SMART: GAF; KEGG: mva:Mvan_5263 putative GAF sensor protein
YP_004236314.1	KEGG: dia:Dtpsy_1356 hypothetical protein
YP_004236315.1	KEGG: vcn:VOLCADRAFT_93089 hypothetical protein
YP_004236316.1	KEGG: dac:Daci_2954 hypothetical protein
YP_004236317.1	KEGG: swi:Swit_5286 alpha/beta hydrolase domain-containing protein
YP_004236318.1	PFAM: Protein of unknown function DUF1504; KEGG: mpt:Mpe_A0367 hypothetical protein
YP_004236319.1	TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: vap:Vapar_5513 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
YP_004236320.1	PFAM: Phospholipase D/Transphosphatidylase; KEGG: ajs:Ajs_3563 cardiolipin synthetase 2
YP_004236321.1	KEGG: vap:Vapar_2385 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236322.1	KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236323.1	SMART: PDZ/DHR/GLGF; TIGRFAM: Peptidase S1C, Do; KEGG: dac:Daci_1594 protease Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF
YP_004236324.1	PFAM: Transposase, IS4-like; KEGG: rpi:Rpic_4189 transposase IS4 family protein
YP_004236325.1	PFAM: Transposase, IS4-like; KEGG: eba:ebA3243 IS5 family transposase
YP_004236326.1	KEGG: psa:PST_3745 CRISPR-associated helicase Cas3 domain-containing protein; TIGRFAM: CRISPR-associated HD domain; Helicase Cas3, CRISPR-associated, core; SMART: DEAD-like helicase, N-terminal
YP_004236327.1	KEGG: psa:PST_3746 CRISPR-associated Cas5d family protein; TIGRFAM: CRISPR-associated protein, Cas5d-type; CRISPR-associated protein Cas5, N-terminal domain; PFAM: CRISPR-associated protein, Cas5
YP_004236328.1	KEGG: psa:PST_3747 CRISPR-associated Csd1 family protein; TIGRFAM: CRISPR-associated protein, Csd1-type; PFAM: CRISPR-associated protein, Csd1-type
YP_004236329.1	KEGG: avn:Avin_31600 CRISPR-associated protein Csd2; TIGRFAM: CRISPR-associated protein Csd2; CRISPR-associated protein TM1801; PFAM: CRISPR-associated protein TM1801
YP_004236330.1	KEGG: xop:PXO_02697 crispr-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; PFAM: Dna2/Cas4, domain of unknown function DUF83
YP_004236331.1	KEGG: avn:Avin_31580 CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, DVULG subtype; CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1
YP_004236332.1	KEGG: psa:PST_3751 CRISPR-associated Cas2 family protein; TIGRFAM: CRISPR associated protein Cas2; PFAM: Virulence-associated protein D / CRISPR associated protein Cas2
YP_004236333.1	KEGG: pst:PSPTO_5640 hypothetical protein
YP_004236334.1	KEGG: vap:Vapar_5029 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, plug
YP_004236335.1	KEGG: ajs:Ajs_0665 hypothetical protein
YP_004236336.1	manually curated; TIGRFAM: Luciferase family oxidoreductase, group 1; KEGG: dia:Dtpsy_0643 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup
YP_004236337.1	KEGG: dia:Dtpsy_0642 general secretion pathway protein F; TIGRFAM: General secretion pathway protein F; PFAM: Type II secretion system F domain
YP_004236338.1	KEGG: dia:Dtpsy_0641 5'-nucleotidase; PFAM: 5-nucleotidase
YP_004236339.1	KEGG: ajs:Ajs_0661 signal transduction protein
YP_004236340.1	KEGG: dia:Dtpsy_0639 hypothetical protein
YP_004236341.1	PFAM: Domain of unknown function DUF1854; KEGG: dia:Dtpsy_0638 hypothetical protein
YP_004236342.1	PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: dac:Daci_5708 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236343.1	TIGRFAM: Cyanophycin synthetase; KEGG: dac:Daci_5709 cyanophycin synthetase; PFAM: ATP-grasp fold, RimK-type
YP_004236344.1	TIGRFAM: Cyanophycin synthetase; KEGG: dac:Daci_5710 cyanophycin synthetase; PFAM: Mur ligase, central; ATP-grasp fold, RimK-type; Mur ligase, C-terminal
YP_004236345.1	PFAM: Uncharacterised protein family CreA; KEGG: dia:Dtpsy_0634 CreA family protein
YP_004236346.1	PFAM: Peptidase C48, SUMO/Sentrin/Ubl1; KEGG: xca:xccb100_1256 hypothetical protein
YP_004236347.1	PFAM: DSBA-like thioredoxin domain; KEGG: ajs:Ajs_0654 DsbA oxidoreductase
YP_004236348.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: dia:Dtpsy_0631 2OG-Fe(II) oxygenase
YP_004236349.1	KEGG: tra:Trad_1546 SMC domain protein
YP_004236350.1	KEGG: lch:Lcho_1854 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like
YP_004236351.1	KEGG: dia:Dtpsy_2662 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive
YP_004236352.1	KEGG: ajs:Ajs_0651 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004236353.1	KEGG: ajs:Ajs_0650 response regulator receiver sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236354.1	KEGG: dia:Dtpsy_0628 CheB methylesterase; PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase
YP_004236355.1	PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: ajs:Ajs_0648 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_004236356.1	KEGG: ajs:Ajs_0647 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; CHASE3; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Signal transduction response regulator, receiver domain
YP_004236357.1	KEGG: vap:Vapar_3753 hypothetical protein
YP_004236358.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: pfo:Pfl01_3550 diguanylate cyclase; SMART: Diguanylate cyclase, predicted; HAMP linker domain
YP_004236359.1	KEGG: psl:Psta_4372 hypothetical protein
YP_004236360.1	KEGG: vap:Vapar_2068 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004236361.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: vap:Vapar_2069 extracellular solute-binding protein family 5
YP_004236362.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_2070 binding-protein-dependent transport systems inner membrane component
YP_004236363.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_2071 binding-protein-dependent transport systems inner membrane component
YP_004236364.1	KEGG: vap:Vapar_2072 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004236365.1	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: vap:Vapar_6295 ATP-dependent DNA helicase, RecQ family; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004236366.1	KEGG: dac:Daci_3908 hypothetical protein
YP_004236367.1	PFAM: XdhC- CoxI; KEGG: vei:Veis_4534 hypothetical protein
YP_004236368.1	KEGG: cti:RALTA_B0868 xanthine dehydrogenase aldehyde oxidase, molybdenum binding subunit; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead
YP_004236369.1	KEGG: cti:RALTA_B0867 YagS; molybdopterin dehydrogenase, FAD-binding, CO dehydrogenase flavoprotein, C-terminal; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal
YP_004236370.1	PFAM: [2Fe-2S]-binding; Ferredoxin; KEGG: xac:XAC1189 ferredoxin
YP_004236371.1	KEGG: pau:PA14_61110 hypothetical protein
YP_004236372.1	PFAM: Alcohol dehydrogenase GroES-like; KEGG: cpi:Cpin_4441 alcohol dehydrogenase GroES domain protein
YP_004236373.1	KEGG: mch:Mchl_3369 hypothetical protein
YP_004236374.1	PFAM: Nitroreductase-like; KEGG: ccs:CCNA_01516 NAD(P)H-dependent quinone reductase
YP_004236375.1	KEGG: dac:Daci_3158 hypothetical protein
YP_004236376.1	PFAM: NUDIX hydrolase domain; KEGG: ctt:CtCNB1_0652 NUDIX hydrolase
YP_004236377.1	KEGG: dac:Daci_5725 5'-nucleotidase domain-containing protein; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase
YP_004236378.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_3816 transcriptional regulator, LysR family
YP_004236379.1	PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: pol:Bpro_1159 hypothetical protein
YP_004236380.1	PFAM: Transcription elongation factor, GreA/GreB, C-terminal; KEGG: vap:Vapar_6013 GreA/GreB family elongation factor
YP_004236381.1	KEGG: xfn:XfasM23_0542 alpha/beta hydrolase domain-containing protein
YP_004236382.1	KEGG: rso:RSp1107 organic hydroperoxide resistance protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein
YP_004236383.1	KEGG: xfn:XfasM23_0543 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004236384.1	KEGG: vap:Vapar_5247 CHAD domain containing protein; PFAM: CHAD; Adenylate cyclase; SMART: CHAD
YP_004236385.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_5821 LysR family transcriptional regulator
YP_004236386.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_6293 binding-protein-dependent transport systems inner membrane component
YP_004236387.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bpy:Bphyt_6294 binding-protein-dependent transport systems inner membrane component
YP_004236388.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: bpy:Bphyt_6295 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004236389.1	SMART: ATPase, AAA+ type, core; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; KEGG: bpy:Bphyt_6296 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal
YP_004236390.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: bpy:Bphyt_6297 extracellular solute-binding protein family 5
YP_004236391.1	KEGG: bpy:Bphyt_6298 X-Pro dipeptidyl-peptidase domain protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal
YP_004236392.1	PFAM: Porin, Gram-negative type; KEGG: reh:H16_A1305 outer membrane protein (porin)
YP_004236393.1	PFAM: Extracellular ligand-binding receptor; KEGG: app:CAP2UW1_3320 extracellular ligand-binding receptor
YP_004236394.1	KEGG: hse:Hsero_3032 methyl-accepting chemotaxis transducer transmembrane protein; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236395.1	PFAM: Alpha/beta hydrolase, N-terminal; KEGG: rer:RER_53490 lipase
YP_004236396.1	PFAM: Protein of unknown function DUF2721; KEGG: ppd:Ppro_1641 hypothetical protein
YP_004236397.1	PFAM: Uncharacterised protein family UPF0753; KEGG: rpf:Rpic12D_3486 hypothetical protein
YP_004236398.1	PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; KEGG: rpf:Rpic12D_3485 NADH dehydrogenase subunit L
YP_004236399.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mei:Msip34_2091 transcriptional regulator, LysR family
YP_004236400.1	PFAM: Protein of unknown function DUF1486; KEGG: amd:AMED_6462 probable ketosteroid isomerase-related protein
YP_004236401.1	TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: dia:Dtpsy_0620 glucosamine--fructose-6-phosphate aminotransferase; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II
YP_004236402.1	KEGG: pol:Bpro_0674 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type
YP_004236403.1	PFAM: Drug/metabolite transporter; KEGG: ppg:PputGB1_4245 hypothetical protein
YP_004236404.1	KEGG: dac:Daci_5902 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236405.1	TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: dia:Dtpsy_0615 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase
YP_004236406.1	KEGG: pna:Pnap_0532 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004236407.1	PFAM: BLUF; KEGG: pol:Bpro_0667 sensors of blue-light using FAD
YP_004236408.1	PFAM: Protein of unknown function DUF2917; KEGG: dia:Dtpsy_0614 hypothetical protein
YP_004236409.1	KEGG: vei:Veis_2647 hypothetical protein
YP_004236410.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_0634 LysR family transcriptional regulator
YP_004236411.1	PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: vap:Vapar_4845 2OG-Fe(II) oxygenase
YP_004236412.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4846 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004236413.1	PFAM: Basic membrane lipoprotein; KEGG: vap:Vapar_4847 basic membrane lipoprotein
YP_004236414.1	PFAM: ABC transporter-like; KEGG: vap:Vapar_4848 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236415.1	PFAM: ABC transporter permease; KEGG: psp:PSPPH_1052 branched-chain amino acid ABC transporter, permease protein
YP_004236416.1	PFAM: ABC transporter permease; KEGG: psa:PST_3579 ABC transporter permease
YP_004236417.1	PFAM: Isochorismatase-like; KEGG: vap:Vapar_4851 isochorismatase hydrolase
YP_004236418.1	TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; PFAM: Aminoacyl-tRNA synthetase, class Ib; RNA-binding S4; KEGG: dia:Dtpsy_0611 tyrosyl-tRNA synthetase; SMART: RNA-binding S4
YP_004236419.1	PFAM: Peptidase M23; KEGG: ajs:Ajs_0631 peptidase M23B
YP_004236420.1	PFAM: Anhydro-N-acetylmuramic acid kinase; KEGG: dac:Daci_5907 anhydro-N-acetylmuramic acid kinase
YP_004236421.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_4675 major facilitator superfamily MFS_1
YP_004236422.1	TIGRFAM: FeS cluster insertion; HAMAP: FeS cluster insertion ErpA; KEGG: vap:Vapar_4676 iron-sulfur cluster insertion protein ErpA; PFAM: FeS cluster biogenesis
YP_004236423.1	PFAM: Protein of unknown function DUF583; KEGG: dia:Dtpsy_0607 protein of unknown function DUF583
YP_004236424.1	KEGG: vei:Veis_2640 hypothetical protein
YP_004236425.1	PFAM: Ribosomal protein S9; KEGG: dia:Dtpsy_0605 30S ribosomal protein S9
YP_004236426.1	KEGG: dia:Dtpsy_0604 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13
YP_004236427.1	KEGG: dia:Dtpsy_0603 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain
YP_004236428.1	PFAM: Protein of unknown function DUF519; KEGG: dia:Dtpsy_0602 protein of unknown function DUF519
YP_004236429.1	KEGG: ctt:CtCNB1_0538 rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase
YP_004236430.1	KEGG: dia:Dtpsy_0600 hypothetical protein
YP_004236431.1	TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: dia:Dtpsy_0599 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_004236432.1	PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ajs:Ajs_0619 ribosomal RNA methyltransferase RrmJ/FtsJ
YP_004236433.1	TIGRFAM: Adenosylhomocysteinase; KEGG: xtr:100489951 adenosylhomocysteinase-like; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding
YP_004236434.1	PFAM: Acyltransferase 3; KEGG: xop:PXO_05412 putative O-antigen acetylase
YP_004236435.1	KEGG: ajs:Ajs_0617 peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2
YP_004236436.1	KEGG: dac:Daci_5928 hypothetical protein
YP_004236437.1	PFAM: Drug/metabolite transporter; KEGG: dac:Daci_5929 hypothetical protein
YP_004236438.1	PFAM: Glycosyl transferase, family 2; KEGG: dac:Daci_5930 glycosyl transferase family protein
YP_004236439.1	KEGG: ajs:Ajs_0616 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3
YP_004236440.1	KEGG: vap:Vapar_4691 hypothetical protein
YP_004236441.1	KEGG: mpt:Mpe_A0031 hypothetical protein
YP_004236442.1	PFAM: ABC transporter-like; KEGG: dac:Daci_1367 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236443.1	KEGG: dia:Dtpsy_0590 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004236444.1	KEGG: vap:Vapar_0829 polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component
YP_004236445.1	KEGG: vap:Vapar_0828 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004236446.1	KEGG: dia:Dtpsy_0587 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004236447.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_0586 transcriptional regulator, LysR family
YP_004236448.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: dia:Dtpsy_0585 tripartite ATP-independent periplasmic transporter DctQ component
YP_004236449.1	KEGG: ajs:Ajs_0605 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004236450.1	KEGG: ajs:Ajs_0604 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004236451.1	PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: ajs:Ajs_0602 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236452.1	PFAM: Thioesterase superfamily; KEGG: pol:Bpro_3907 thioesterase superfamily protein
YP_004236453.1	PFAM: Protein of unknown function DUF583; KEGG: ajs:Ajs_0600 hypothetical protein
YP_004236454.1	KEGG: vap:Vapar_3576 hypothetical protein
YP_004236455.1	PFAM: Crotonase, core; KEGG: dia:Dtpsy_0577 enoyl-CoA hydratase
YP_004236456.1	KEGG: dia:Dtpsy_0576 hypothetical protein
YP_004236457.1	TIGRFAM: Thiolase; KEGG: ajs:Ajs_0595 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004236458.1	KEGG: pol:Bpro_3955 hypothetical protein
YP_004236459.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: ajs:Ajs_0594 3-hydroxyacyl-CoA dehydrogenase
YP_004236460.1	PFAM: Protein of unknown function DUF2147; KEGG: vap:Vapar_0811 hypothetical protein
YP_004236461.1	PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA dehydrogenase, N-terminal, bacteria; KEGG: dia:Dtpsy_0571 acyl-CoA dehydrogenase domain protein
YP_004236462.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dia:Dtpsy_0570 transcriptional regulator, TetR family
YP_004236463.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: ajs:Ajs_0589 nucleoid occlusion protein
YP_004236464.1	KEGG: dac:Daci_1323 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Two-component sensor kinase N-terminal; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain
YP_004236465.1	KEGG: dac:Daci_1322 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236466.1	TIGRFAM: Acetylglutamate kinase; KEGG: pna:Pnap_3479 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase
YP_004236467.1	PFAM: Glycosyl transferase, family 4; KEGG: vei:Veis_1227 glycosyl transferase family protein
YP_004236468.1	KEGG: vei:Veis_1228 glycosyl transferase family protein
YP_004236469.1	PFAM: Glycosyl transferase, family 2; Methionine biosynthesis MetW; KEGG: vei:Veis_0632 glycosyl transferase family protein
YP_004236470.1	PFAM: Methyltransferase type 11; KEGG: dac:Daci_1316 methyltransferase type 12
YP_004236471.1	KEGG: dac:Daci_1315 hypothetical protein
YP_004236472.1	PFAM: ABC transporter-like; KEGG: vei:Veis_0673 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236473.1	PFAM: ABC-2 type transporter; KEGG: vei:Veis_0674 ABC-2 type transporter
YP_004236474.1	PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dac:Daci_1312 PpiC-type peptidyl-prolyl cis-trans isomerase
YP_004236475.1	KEGG: dac:Daci_1311 hypothetical protein
YP_004236476.1	KEGG: vei:Veis_0677 hypothetical protein
YP_004236477.1	KEGG: dac:Daci_1309 general secretion pathway protein D; TIGRFAM: Type II secretion system GspD; PFAM: Type II/III secretion system; NolW-like
YP_004236478.1	KEGG: dac:Daci_1308 hypothetical protein
YP_004236479.1	PFAM: General secretion pathway protein M; KEGG: vei:Veis_0680 general secretion pathway protein M
YP_004236480.1	PFAM: Fimbrial assembly; KEGG: vei:Veis_0681 fimbrial assembly family protein
YP_004236481.1	manually curated; KEGG: vei:Veis_0682 general secretory pathway protein K
YP_004236482.1	KEGG: dac:Daci_1304 general secretion pathway protein J
YP_004236483.1	KEGG: vei:Veis_0684 general secretion pathway protein I
YP_004236484.1	KEGG: vei:Veis_0685 general secretion pathway protein H
YP_004236485.1	KEGG: vei:Veis_0686 general secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal
YP_004236486.1	PFAM: Type II secretion system F domain; KEGG: vei:Veis_0687 type II secretion system protein
YP_004236487.1	TIGRFAM: Type II secretion system GspE; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; KEGG: vei:Veis_0688 general secretory pathway protein E; SMART: ATPase, AAA+ type, core
YP_004236488.1	KEGG: vei:Veis_0689 hypothetical protein
YP_004236489.1	TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; KEGG: xtr:100495459 dTDP-4-dehydrorhamnose 3,5-epimerase-like; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related
YP_004236490.1	TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: ajs:Ajs_0539 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase
YP_004236491.1	TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: dia:Dtpsy_0554 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase
YP_004236492.1	TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: ajs:Ajs_0537 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase
YP_004236493.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: pol:Bpro_4025 TetR family transcriptional regulator
YP_004236494.1	KEGG: pna:Pnap_3497 hypothetical protein
YP_004236495.1	KEGG: dia:Dtpsy_0550 pantothenate kinase; TIGRFAM: Type III pantothenate kinase; PFAM: Type III pantothenate kinase
YP_004236496.1	KEGG: ajs:Ajs_0533 peptidoglycan-binding LysM; PFAM: Transport-associated; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004236497.1	KEGG: bpe:BP2599 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004236498.1	PFAM: Negative transcriptional regulator; KEGG: bbr:BB2357 hypothetical protein
YP_004236499.1	KEGG: ajs:Ajs_0532 rhodanese domain-containing protein; manually curated; SMART: Rhodanese-like
YP_004236500.1	PFAM: Protein of unknown function DUF45; KEGG: ajs:Ajs_0531 hypothetical protein
YP_004236501.1	KEGG: dia:Dtpsy_0546 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase
YP_004236502.1	TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: vei:Veis_2164 histidinol-phosphate phosphatase family protein
YP_004236503.1	KEGG: pna:Pnap_0445 hypothetical protein
YP_004236504.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; KEGG: dia:Dtpsy_0544 glycyl-tRNA synthetase, beta subunit
YP_004236505.1	TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: dac:Daci_1288 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit
YP_004236506.1	PFAM: Cytochrome c, class I; KEGG: vei:Veis_2708 cytochrome c, class I
YP_004236507.1	KEGG: vei:Veis_2160 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal
YP_004236508.1	TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: dia:Dtpsy_0541 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
YP_004236509.1	SMART: Asparaginase/glutaminase; TIGRFAM: L-asparaginase, type II; KEGG: pol:Bpro_4206 L-asparaginases, type II; PFAM: Asparaginase/glutaminase
YP_004236510.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: pol:Bpro_4207 LysR family transcriptional regulator
YP_004236511.1	KEGG: ajs:Ajs_0524 apolipoprotein N-acyltransferase; TIGRFAM: Apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004236512.1	PFAM: Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: ajs:Ajs_0523 CBS domain-containing protein
YP_004236513.1	KEGG: bmj:BMULJ_06209 rhs family protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat; PAAR motif
YP_004236514.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dac:Daci_1270 GCN5-related N-acetyltransferase
YP_004236515.1	KEGG: dia:Dtpsy_0537 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type
YP_004236516.1	KEGG: vcj:VCD_000032 lipase precursor; PFAM: Alpha/beta hydrolase fold-1
YP_004236517.1	PFAM: Proteobacterial lipase chaperone; KEGG: scl:sce3471 putative lipase activator protein
YP_004236518.1	TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: xtr:100491866 4-hydroxyphenylpyruvate dioxygenase-like; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase
YP_004236519.1	KEGG: ajs:Ajs_0519 hypothetical protein
YP_004236520.1	TIGRFAM: Phenylalanine-4-hydroxylase, monomeric form; KEGG: dia:Dtpsy_0534 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal
YP_004236521.1	KEGG: cre:CHLREDRAFT_146977 guanylate cyclase
YP_004236522.1	KEGG: dia:Dtpsy_0533 PGAP1 family protein
YP_004236523.1	KEGG: ajs:Ajs_0516 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004236524.1	PFAM: Periplasmic binding protein/LacI transcriptional regulator; KEGG: vap:Vapar_4636 periplasmic binding protein/LacI transcriptional regulator
YP_004236525.1	PFAM: ABC transporter-like; KEGG: vei:Veis_2132 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236526.1	PFAM: ABC transporter permease; KEGG: xtr:100491697 ribose import ATP-binding protein RbsA-like
YP_004236527.1	KEGG: vap:Vapar_4639 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004236528.1	TIGRFAM: Ribokinase, bacterial; KEGG: vei:Veis_2130 ribokinase-like domain-containing protein; PFAM: Carbohydrate/purine kinase
YP_004236529.1	PFAM: D-ribose pyranase RbsD/L-fucose mutarotase FucU; KEGG: vap:Vapar_4641 D-ribose pyranase
YP_004236530.1	KEGG: vap:Vapar_3609 hypothetical protein
YP_004236531.1	KEGG: dac:Daci_1264 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004236532.1	PFAM: Lytic transglycosylase-like, catalytic; KEGG: dia:Dtpsy_0525 lytic transglycosylase catalytic
YP_004236533.1	KEGG: dia:Dtpsy_0524 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase
YP_004236534.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; 7TM-DISM receptor, extracellular domain, type 2; 7TM-DISM receptor, extracellular domain, type 1; KEGG: ajs:Ajs_3756 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004236535.1	PFAM: Glutathione S-transferase, N-terminal; KEGG: dia:Dtpsy_0523 glutathione S-transferase domain protein
YP_004236536.1	KEGG: vap:Vapar_5004 hypothetical protein
YP_004236537.1	KEGG: dia:Dtpsy_0521 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain
YP_004236538.1	KEGG: dia:Dtpsy_0520 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004236539.1	KEGG: dia:Dtpsy_0519 trehalose-phosphatase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Trehalose-phosphatase
YP_004236540.1	PFAM: Glycoside hydrolase 15-related; KEGG: dia:Dtpsy_0518 glycoside hydrolase 15-related
YP_004236541.1	TIGRFAM: Alpha,alpha-trehalose-phosphate synthase; KEGG: dia:Dtpsy_0517 alpha,alpha-trehalose-phosphate synthase (UDP-forming); PFAM: Glycosyl transferase, family 20
YP_004236542.1	KEGG: sen:SACE_5305 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004236543.1	PFAM: ROK; KEGG: vap:Vapar_0982 ROK family protein
YP_004236544.1	PFAM: Domain of unknown function DUF861, cupin-3; KEGG: psp:PSPPH_3748 hypothetical protein
YP_004236545.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: psp:PSPPH_3749 MupB, putative
YP_004236546.1	TIGRFAM: Amino acid adenylation; KEGG: psp:PSPPH_3750 non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding
YP_004236547.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: psp:PSPPH_3751 glyoxalase family protein
YP_004236548.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: hse:Hsero_0447 GNAT family acetyltransferase
YP_004236549.1	KEGG: psp:PSPPH_3753 siderophore biosynthesis protein
YP_004236550.1	TIGRFAM: Diaminobutyrate-2-oxoglutarate transaminase; KEGG: psp:PSPPH_3754 diaminobutyrate--2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III
YP_004236551.1	KEGG: ppr:PBPRA2230 putative diaminobutyrate-pyruvate transaminase & L-2,4-diaminobutyrate decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase
YP_004236552.1	KEGG: bra:BRADO2752 glutamate/aspartate periplasmic-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3
YP_004236553.1	PFAM: Protein of unknown function DUF2905; KEGG: dia:Dtpsy_0515 hypothetical protein
YP_004236554.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dia:Dtpsy_0514 binding-protein-dependent transport systems inner membrane component
YP_004236555.1	PFAM: ABC transporter-like; KEGG: dia:Dtpsy_0513 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236556.1	KEGG: dia:Dtpsy_0512 nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein
YP_004236557.1	KEGG: dia:Dtpsy_0511 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004236558.1	KEGG: bge:BC1002_5672 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA
YP_004236559.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: bge:BC1002_5673 extracellular solute-binding protein family 1
YP_004236560.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bge:BC1002_5674 binding-protein-dependent transport systems inner membrane component
YP_004236561.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bge:BC1002_5675 binding-protein-dependent transport systems inner membrane component
YP_004236562.1	PFAM: ABC transporter-like; Transport-associated OB, type 1; KEGG: bge:BC1002_5676 ABC transporter related protein; SMART: ATPase, AAA+ type, core
YP_004236563.1	PFAM: Protein of unknown function DUF185; KEGG: ajs:Ajs_0497 hypothetical protein
YP_004236564.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_0496 short-chain dehydrogenase/reductase SDR
YP_004236565.1	KEGG: ajs:Ajs_0495 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase
YP_004236566.1	PFAM: Protein of unknown function DUF466; KEGG: nwa:Nwat_1016 hypothetical protein
YP_004236567.1	PFAM: Carbon starvation protein CstA; KEGG: vap:Vapar_3982 carbon starvation protein CstA
YP_004236568.1	KEGG: vap:Vapar_3992 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004236569.1	KEGG: vap:Vapar_3993 histidine kinase; PFAM: Cache, type 2; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004236570.1	PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; KEGG: ajs:Ajs_0494 C32 tRNA thiolase
YP_004236571.1	KEGG: ajs:Ajs_0493 hypothetical protein
YP_004236572.1	KEGG: vei:Veis_1461 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004236573.1	PFAM: Alanine racemase, N-terminal; KEGG: dia:Dtpsy_0501 alanine racemase domain protein
YP_004236574.1	PFAM: Phage tail collar; KEGG: fjo:Fjoh_4047 phage tail collar domain-containing protein
YP_004236575.1	PFAM: Phage tail collar; KEGG: shw:Sputw3181_3688 phage tail collar domain-containing protein
YP_004236576.1	PFAM: Phage tail collar; KEGG: bgl:bglu_2g12580 phage tail collar
YP_004236577.1	TIGRFAM: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, N-terminal; DNA helicase, Holliday junction RuvB type, C-terminal; KEGG: dia:Dtpsy_0499 Holliday junction DNA helicase RuvB; SMART: ATPase, AAA+ type, core
YP_004236578.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: dac:Daci_5718 peptidase S1 and S6 chymotrypsin/Hap
YP_004236579.1	PFAM: Peptidase S1/S6, chymotrypsin/Hap; KEGG: vei:Veis_4069 peptidase S1 and S6, chymotrypsin/Hap
YP_004236580.1	TIGRFAM: Bacterial DNA recombination protein RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; KEGG: ajs:Ajs_3700 Holliday junction DNA helicase RuvA; SMART: Helix-hairpin-helix DNA-binding motif, class 1
YP_004236581.1	PFAM: PhoH-like protein; KEGG: dia:Dtpsy_0492 PhoH family protein
YP_004236582.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004236583.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004236584.1	KEGG: dac:Daci_3853 hypothetical protein
YP_004236585.1	KEGG: ajs:Ajs_3702 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted
YP_004236586.1	KEGG: ajs:Ajs_3706 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004236587.1	KEGG: vei:Veis_1334 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein
YP_004236588.1	PFAM: Amidohydrolase 2; KEGG: pol:Bpro_3372 amidohydrolase 2
YP_004236589.1	KEGG: pol:Bpro_3371 twin-arginine translocation pathway signal
YP_004236590.1	KEGG: pol:Bpro_3370 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR
YP_004236591.1	KEGG: vap:Vapar_5212 ATP-dependent RNA helicase DbpA; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004236592.1	TIGRFAM: AMP nucleosidase; KEGG: ajs:Ajs_3709 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase, N-terminal; Nucleoside phosphorylase domain
YP_004236593.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: mms:mma_1880 hypothetical protein; SMART: Diguanylate cyclase, predicted
YP_004236594.1	PFAM: Porin, Gram-negative type; KEGG: rpf:Rpic12D_3719 porin gram-negative type
YP_004236595.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_5312 major facilitator superfamily MFS_1
YP_004236596.1	KEGG: vap:Vapar_5311 amidohydrolase 2; PFAM: Amidohydrolase 2
YP_004236597.1	KEGG: vap:Vapar_5310 hydroxyquinol 1,2-dioxygenase; PFAM: Intradiol ring-cleavage dioxygenase, C-terminal; Catechol dioxygenase, N-terminal
YP_004236598.1	KEGG: vap:Vapar_5309 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type
YP_004236599.1	PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: vap:Vapar_5308 transcriptional regulator, LysR family
YP_004236600.1	KEGG: vap:Vapar_5307 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004236601.1	PFAM: Acyl-CoA dehydrogenase, type 2, C-terminal; Acyl-CoA dehydrogenase, N-terminal; KEGG: vap:Vapar_5306 acyl-CoA dehydrogenase type 2 domain protein
YP_004236602.1	KEGG: vap:Vapar_5305 flavin reductase domain protein FMN-binding; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding
YP_004236603.1	KEGG: xac:XAC2606 hypothetical protein
YP_004236604.1	PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; KEGG: bur:Bcep18194_A3957 N-acetylmuramoyl-L-alanine amidase
YP_004236605.1	KEGG: vap:Vapar_2655 hypothetical protein
YP_004236606.1	PFAM: Shikimate dehydrogenase substrate binding, N-terminal; KEGG: azl:AZL_028730 shikimate 5-dehydrogenase
YP_004236607.1	KEGG: bte:BTH_II0908 protein-N p-phosphohistidine-sugar phosphotransferase; TIGRFAM: Phosphotransferase system, fructose IIC component; Phosphotransferase system, fructose-specific IIB subunit; PFAM: Phosphotransferase system, EIIC; Phosphotransferase system, EIIB component, type 2/3
YP_004236608.1	TIGRFAM: Tagatose/fructose phosphokinase; KEGG: mpo:Mpop_1188 1-phosphofructokinase; PFAM: Carbohydrate/purine kinase
YP_004236609.1	TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase system, phosphocarrier HPr protein; KEGG: rsc:RCFBP_10598 phosphotransferase system, fructose-specific EI/HPr/EIIA components; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; Phosphotransferase system, phosphocarrier HPr protein; Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2
YP_004236610.1	KEGG: bte:BTH_II0905 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004236611.1	KEGG: xac:XAC0393 HpaF protein
YP_004236612.1	KEGG: dac:Daci_3773 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004236613.1	PFAM: Heat shock protein 70; KEGG: dac:Daci_3774 2-alkenal reductase
YP_004236614.1	PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: mar:MAE_50880 hypothetical protein
YP_004236615.1	TIGRFAM: Phosphoribosylglycinamide formyltransferase 2; KEGG: dac:Daci_5252 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004236616.1	KEGG: xac:XAC3770 hypothetical protein
YP_004236617.1	PFAM: YCII-related; KEGG: bch:Bcen2424_3292 hypothetical protein
YP_004236618.1	PFAM: Flavodoxin-like fold; KEGG: rso:RSp1258 putative [acyl-carrier-protein] phosphodiesterase
YP_004236619.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rsl:RPSI07_mp1291 putative transcriptional regulator, LysR family
YP_004236620.1	KEGG: dia:Dtpsy_0476 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal
YP_004236621.1	KEGG: vei:Veis_2404 regulatory proteins, IclR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal
YP_004236622.1	KEGG: reu:Reut_C5933 hypothetical protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding
YP_004236623.1	KEGG: vei:Veis_2406 hypothetical protein
YP_004236624.1	KEGG: vei:Veis_2407 endoribonuclease L-PSP; manually curated; PFAM: Endoribonuclease L-PSP
YP_004236625.1	PFAM: Amidohydrolase 2; KEGG: vei:Veis_2408 amidohydrolase 2
YP_004236626.1	KEGG: vei:Veis_2409 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004236627.1	TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: vei:Veis_2410 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like
YP_004236628.1	KEGG: dia:Dtpsy_0475 2-dehydro-3-deoxyglucarate aldolase; PFAM: Aldehyde-lyase domain
YP_004236629.1	KEGG: dia:Dtpsy_0474 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004236630.1	KEGG: dac:Daci_1195 OsmC family protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein
YP_004236631.1	PFAM: Metallo-dependent phosphatase; KEGG: dia:Dtpsy_0472 metallophosphoesterase
YP_004236632.1	PFAM: Serine/threonine-protein kinase-like domain; UspA; KEGG: dia:Dtpsy_0471 serine/threonine protein kinase
YP_004236633.1	PFAM: Aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0479 serine/threonine protein kinase
YP_004236634.1	KEGG: ctt:CtCNB1_0831 two component transcriptional regulator, winged; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236635.1	PFAM: Domain of unknown function DUF11; KEGG: dac:Daci_1176 hypothetical protein
YP_004236636.1	KEGG: avn:Avin_29290 hybrid histidine protein kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain
YP_004236637.1	PFAM: Carbohydrate-selective porin OprB; KEGG: reh:H16_A0425 carbohydrate-selective porin
YP_004236638.1	KEGG: dia:Dtpsy_0469 hypothetical protein
YP_004236639.1	PFAM: Exosortase EpsH-related; KEGG: ajs:Ajs_0477 hypothetical protein
YP_004236640.1	KEGG: vap:Vapar_2997 hypothetical protein
YP_004236641.1	KEGG: dia:Dtpsy_0466 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain
YP_004236642.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: ccs:CCNA_03333 PAS-family sensor histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236643.1	TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; KEGG: ajs:Ajs_0474 RNA-binding S4 domain-containing protein; SMART: RNA-binding S4
YP_004236644.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain; KEGG: mpt:Mpe_A0214 diguanylate cyclase/phosphodiesterase; SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; HAMP linker domain
YP_004236645.1	KEGG: hse:Hsero_2701 hypothetical protein
YP_004236646.1	KEGG: rfr:Rfer_3119 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236647.1	KEGG: ajs:Ajs_0473 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004236648.1	PFAM: Glycosyl hydrolase family 98; Glycosyl hydrolase family 98, C-terminal; Carbohydrate binding domain, family 6; KEGG: cja:CJA_3286 endo-beta-galactosidase, putative, ebg98A
YP_004236649.1	TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: dac:Daci_1442 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004236650.1	PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ajs:Ajs_3724 endonuclease/exonuclease/phosphatase
YP_004236651.1	KEGG: dia:Dtpsy_3008 cardiolipin synthase 2; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase
YP_004236652.1	PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: dia:Dtpsy_3009 hypothetical protein
YP_004236653.1	PFAM: FAD dependent oxidoreductase; KEGG: dia:Dtpsy_3010 FAD dependent oxidoreductase
YP_004236654.1	KEGG: dac:Daci_1391 hypothetical protein
YP_004236655.1	KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004236656.1	KEGG: dac:Daci_1408 hypothetical protein
YP_004236657.1	PFAM: Class II aldolase/adducin, N-terminal; KEGG: dac:Daci_1406 aldolase II superfamily protein
YP_004236658.1	KEGG: dac:Daci_1403 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004236659.1	KEGG: dac:Daci_1402 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal
YP_004236660.1	KEGG: dia:Dtpsy_3014 hypothetical protein
YP_004236661.1	KEGG: dac:Daci_1399 hypothetical protein
YP_004236662.1	KEGG: dac:Daci_1398 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004236663.1	PFAM: Crotonase, core; KEGG: dia:Dtpsy_3016 enoyl-CoA hydratase
YP_004236664.1	KEGG: dac:Daci_1396 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004236665.1	KEGG: dac:Daci_1395 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004236666.1	KEGG: dia:Dtpsy_3020 3-hydroxyacyl-CoA dehydrogenase NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core
YP_004236667.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_3764 transcriptional regulator, LysR family
YP_004236668.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: vap:Vapar_3570 lysine exporter protein (LysE/YggA)
YP_004236669.1	KEGG: app:CAP2UW1_1275 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator AsnC-type
YP_004236670.1	KEGG: dac:Daci_1388 heat shock protein HtpX; HAMAP: Peptidase M48, protease HtpX, putative; PFAM: Peptidase M48
YP_004236671.1	PFAM: Protein of unknown function DUF3025; KEGG: dia:Dtpsy_3024 putative transmembrane protein
YP_004236672.1	PFAM: Domain of unknown function DUF88; KEGG: ajs:Ajs_3744 hypothetical protein
YP_004236673.1	TIGRFAM: Dihydroorotase homodimeric type; KEGG: dia:Dtpsy_3026 dihydroorotase; PFAM: Amidohydrolase 1
YP_004236674.1	KEGG: dac:Daci_0122 histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236675.1	KEGG: dac:Daci_0123 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236676.1	KEGG: dac:Daci_0125 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004236677.1	PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: dac:Daci_0126 hypothetical protein
YP_004236678.1	PFAM: ABC transporter-like; KEGG: dac:Daci_0127 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236679.1	PFAM: Secretion protein HlyD; KEGG: dac:Daci_0128 secretion protein HlyD family protein
YP_004236680.1	KEGG: dac:Daci_0129 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; TIGRFAM: Pyridoxal phosphate phosphatase-related; HAD-superfamily hydrolase, subfamily IB, PSPase-like; PFAM: Pyridoxal phosphate phosphatase-related
YP_004236681.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: dac:Daci_0130 alpha/beta hydrolase fold
YP_004236682.1	PFAM: Drug/metabolite transporter; KEGG: dac:Daci_0131 hypothetical protein
YP_004236683.1	PFAM: Drug/metabolite transporter; KEGG: ctt:CtCNB1_0145 quaternary ammonium compound-resistance protein
YP_004236684.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dac:Daci_0133 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004236685.1	PFAM: Ureohydrolase; KEGG: dac:Daci_0135 hypothetical protein
YP_004236686.1	PFAM: Protein of unknown function DUF482; KEGG: dac:Daci_0136 hypothetical protein
YP_004236687.1	KEGG: dac:Daci_0137 aminotransferase class-III; PFAM: Aminotransferase class-III
YP_004236688.1	manually curated; KEGG: dac:Daci_3852 hypothetical protein
YP_004236689.1	KEGG: dac:Daci_3849 hypothetical protein
YP_004236690.1	KEGG: xcv:XCV0561 putative secreted protein
YP_004236691.1	KEGG: bqu:BQ02430 hemin binding protein B
YP_004236692.1	KEGG: ajs:Ajs_3747 UvrA family protein; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like
YP_004236693.1	PFAM: Extracellular ligand-binding receptor; KEGG: pol:Bpro_4140 extracellular ligand-binding receptor
YP_004236694.1	KEGG: ajs:Ajs_3750 hypothetical protein
YP_004236695.1	PFAM: Porin, Gram-negative type; KEGG: ctt:CtCNB1_0519 gram-negative type outer membrane porin protein
YP_004236696.1	PFAM: General substrate transporter; KEGG: ctt:CtCNB1_0518 proline/betaine transporter
YP_004236697.1	PFAM: DSBA-like thioredoxin domain; KEGG: dia:Dtpsy_3034 DsbA oxidoreductase
YP_004236698.1	PFAM: Protein of unknown function DUF1289; KEGG: dia:Dtpsy_3035 protein of unknown function DUF1289
YP_004236699.1	PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; KEGG: vap:Vapar_4709 YbaK/prolyl-tRNA synthetase associated region
YP_004236700.1	KEGG: dia:Dtpsy_3038 pyruvate carboxyltransferase; PFAM: Pyruvate carboxyltransferase
YP_004236701.1	KEGG: dia:Dtpsy_3039 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
YP_004236702.1	PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; KEGG: ajs:Ajs_3759 3-methylcrotonoyl-CoA carboxylase, alpha subunit; SMART: Biotin carboxylase, C-terminal
YP_004236703.1	KEGG: dia:Dtpsy_3041 putative transmembrane protein
YP_004236704.1	PFAM: Crotonase, core; KEGG: ajs:Ajs_3761 enoyl-CoA hydratase
YP_004236705.1	KEGG: dia:Dtpsy_3044 propionyl-CoA carboxylase; PFAM: Carboxyl transferase
YP_004236706.1	KEGG: dia:Dtpsy_3045 AMP-binding domain protein; PFAM: AMP-dependent synthetase/ligase
YP_004236707.1	manually curated; PFAM: HTH transcriptional regulator, AraC; KEGG: dia:Dtpsy_3046 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC type, DNA binding domain
YP_004236708.1	PFAM: Histidine phosphatase superfamily, clade-2; KEGG: bac:BamMC406_3239 histidine acid phosphatase
YP_004236709.1	KEGG: dia:Dtpsy_3047 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase
YP_004236710.1	KEGG: dac:Daci_5981 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain
YP_004236711.1	KEGG: pol:Bpro_4182 hypothetical protein
YP_004236712.1	PFAM: Protein of unknown function DUF421; KEGG: dia:Dtpsy_3051 protein of unknown function DUF421
YP_004236713.1	KEGG: ajs:Ajs_3774 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004236714.1	PFAM: Acyltransferase 3; KEGG: dac:Daci_0853 acyltransferase 3
YP_004236715.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3053 short chain dehydrogenase
YP_004236716.1	TIGRFAM: Thiolase; KEGG: vap:Vapar_4732 acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal
YP_004236717.1	KEGG: ajs:Ajs_3777 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase
YP_004236718.1	PFAM: Carbonic anhydrase; KEGG: vei:Veis_1332 carbonate dehydratase; SMART: Carbonic anhydrase
YP_004236719.1	KEGG: dac:Daci_5991 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal
YP_004236720.1	KEGG: dia:Dtpsy_3058 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR, DNA binding; HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR
YP_004236721.1	KEGG: dia:Dtpsy_3059 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core
YP_004236722.1	PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; Signal transduction response regulator, receiver domain; KEGG: dia:Dtpsy_3060 response regulator receiver modulated CheB methylesterase; SMART: Signal transduction response regulator, receiver domain
YP_004236723.1	KEGG: vei:Veis_2173 chemoreceptor glutamine deamidase CheD; PFAM: Chemoreceptor glutamine deamidase CheD
YP_004236724.1	PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; KEGG: ajs:Ajs_3788 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase, CheR-type
YP_004236725.1	KEGG: dac:Daci_0656 CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004236726.1	KEGG: dia:Dtpsy_3064 CheA signal transduction histidine kinase; PFAM: CheW-like protein; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup, homodimeric; SMART: CheW-like protein; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; ATPase-like, ATP-binding domain
YP_004236727.1	KEGG: dia:Dtpsy_3065 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain
YP_004236728.1	KEGG: vei:Veis_2178 hypothetical protein
YP_004236729.1	KEGG: ajs:Ajs_3793 response regulator receiver sensor signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain
YP_004236730.1	KEGG: dia:Dtpsy_3068 two component transcriptional regulator, LuxR family; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004236731.1	manually curated; TIGRFAM: Flagellar biosynthesis protein FliR; KEGG: ajs:Ajs_3795 flagellar biosynthetic protein FliR; PFAM: Type III secretion system inner membrane R protein
YP_004236732.1	KEGG: dia:Dtpsy_3070 flagellar biosynthetic protein FliQ; TIGRFAM: Flagellar biosynthesis protein FliQ; Type III secretion protein HrpO; PFAM: Bacterial export protein FliQ, family 3
YP_004236733.1	KEGG: dia:Dtpsy_3071 flagellar biosynthesis protein FliP; TIGRFAM: Flagellar transport protein FliP; PFAM: Type III secretion system inner membrane P protein
YP_004236734.1	PFAM: Flagellar biosynthesis protein, FliO; KEGG: dia:Dtpsy_3072 flagellar biosynthesis protein FliO
YP_004236735.1	KEGG: dia:Dtpsy_3073 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA)
YP_004236736.1	KEGG: dia:Dtpsy_3074 flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA)
YP_004236737.1	PFAM: Flagellar basal body-associated protein FliL; KEGG: dia:Dtpsy_3075 flagellar basal body-associated protein FliL
YP_004236738.1	PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ajs:Ajs_3802 flagellar hook-length control protein
YP_004236739.1	PFAM: Flagellar export FliJ; KEGG: dia:Dtpsy_3077 flagellar export protein FliJ
YP_004236740.1	TIGRFAM: Flagellar export ATPase, FliI, clade 1; ATPase, type III secretion system, FliI/YscN; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: dac:Daci_0641 flagellar protein export ATPase FliI; SMART: ATPase, AAA+ type, core
YP_004236741.1	PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dia:Dtpsy_3079 flagellar assembly protein FliH
YP_004236742.1	KEGG: ajs:Ajs_3806 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG, C-terminal
YP_004236743.1	KEGG: dia:Dtpsy_3081 flagellar M-ring protein FliF; TIGRFAM: Flagellar FliF M-ring protein; PFAM: Secretory protein YscJ/FliF; Flagellar M-ring C-terminal
YP_004236744.1	KEGG: dia:Dtpsy_3082 flagellar hook-basal body complex subunit FliE; TIGRFAM: Flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE
YP_004236745.1	PFAM: Flagellar export chaperone, FliT; KEGG: dia:Dtpsy_3083 flagellar protein FliT
YP_004236746.1	KEGG: dia:Dtpsy_3084 flagellar protein FliS; TIGRFAM: Flagellar protein FliS; PFAM: Flagellar protein FliS
YP_004236747.1	PFAM: Flagellar hook-associated 2, C-terminal; Flagellin hook, IN motif; Flagellar hook-associated protein 2, N-terminal; KEGG: dia:Dtpsy_3085 flagellar hook-associated 2 domain protein
YP_004236748.1	PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif; KEGG: dia:Dtpsy_3086 flagellin domain protein
YP_004236749.1	PFAM: Flagellin, D0/D1 domain; Flagellin hook, IN motif; KEGG: dia:Dtpsy_3086 flagellin domain protein
YP_004236750.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bch:Bcen2424_0237 DegT/DnrJ/EryC1/StrS aminotransferase
YP_004236751.1	PFAM: ATP-grasp fold, DUF201-type; KEGG: mpo:Mpop_3857 protein of unknown function DUF201
YP_004236752.1	PFAM: Methyltransferase type 12; KEGG: gsu:GSU3018 hypothetical protein
YP_004236753.1	PFAM: Glycosyl transferase, family 2; Methyltransferase type 11; KEGG: xcb:XC_2258 O-antigen biosynthesis protein
YP_004236754.1	KEGG: ajs:Ajs_3815 MotA/TolQ/ExbB proton channel; TIGRFAM: Flagellar motor stator, MotA; PFAM: MotA/TolQ/ExbB proton channel
YP_004236755.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dia:Dtpsy_3089 OmpA/MotB domain protein
YP_004236756.1	manually curated; PFAM: Signal transduction response regulator, receiver domain; KEGG: dia:Dtpsy_3090 response regulator receiver protein; SMART: Signal transduction response regulator, receiver domain
YP_004236757.1	PFAM: Chemotaxis phosphatase, CheZ; KEGG: ajs:Ajs_3818 chemotaxis phosphatase, CheZ
YP_004236758.1	PFAM: Type III secretion exporter; KEGG: dia:Dtpsy_3092 type III secretion exporter
YP_004236759.1	KEGG: ajs:Ajs_3820 flagellar biosynthesis protein FlhA; TIGRFAM: Flagellar biosynthesis protein FlhA; PFAM: Type III secretion system FHIPEP
YP_004236760.1	TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle; SMART: ATPase, AAA+ type, core
YP_004236761.1	KEGG: ajs:Ajs_3822 hypothetical protein
YP_004236762.1	KEGG: dia:Dtpsy_3096 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004236763.1	KEGG: vei:Veis_0572 hypothetical protein
YP_004236764.1	KEGG: dia:Dtpsy_3098 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor, FlgM
YP_004236765.1	TIGRFAM: Flagella basal body P-ring formation protein FlgA; PFAM: SAF domain; KEGG: dia:Dtpsy_3099 flagella basal body P-ring formation protein FlgA; SMART: SAF domain
YP_004236766.1	KEGG: ajs:Ajs_3827 flagellar basal-body rod protein FlgB; TIGRFAM: Flagellar basal-body rod protein FlgB; PFAM: Flagellar basal body rod protein, N-terminal
YP_004236767.1	KEGG: dia:Dtpsy_3101 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004236768.1	PFAM: Flagellar hook capping protein; KEGG: dia:Dtpsy_3102 flagellar hook capping protein
YP_004236769.1	KEGG: vei:Veis_0566 flagellar basal body FlaE domain-containing protein; TIGRFAM: Fagellar hook-basal body protein, FlgE/F/G; PFAM: Flagellar basal body FlaE; Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004236770.1	KEGG: dia:Dtpsy_3104 flagellar basal-body rod protein FlgF; TIGRFAM: Flagellar basal-body rod FlgF; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004236771.1	KEGG: dia:Dtpsy_3105 flagellar basal-body rod protein FlgG; TIGRFAM: Flagellar basal-body rod FlgG; Fagellar hook-basal body protein, FlgE/F/G; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004236772.1	PFAM: Flagellar L-ring protein; KEGG: vei:Veis_0563 flagellar L-ring protein
YP_004236773.1	PFAM: Flagellar P-ring protein; KEGG: ajs:Ajs_3835 flagellar basal body P-ring protein
YP_004236774.1	KEGG: ajs:Ajs_3836 flagellar rod assembly protein/muramidase FlgJ; TIGRFAM: Flagellar protein FlgJ type-2; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal
YP_004236775.1	KEGG: vei:Veis_0560 flagellar hook-associated protein FlgK; TIGRFAM: Flagellar hook-associated protein, FlgK; PFAM: Domain of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal
YP_004236776.1	KEGG: vei:Veis_0559 flagellar hook-associated protein 3; TIGRFAM: Flagellar hook-associated protein 3; PFAM: Flagellin, D0/D1 domain
YP_004236777.1	PFAM: Metal-dependent hydrolase HDOD; KEGG: dia:Dtpsy_3112 putative signal transduction protein
YP_004236778.1	KEGG: dia:Dtpsy_3115 transcriptional regulator, GntR family with aminotransferase domain; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR
YP_004236779.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ajs:Ajs_3843 hypothetical protein
YP_004236780.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_3844 hypothetical protein
YP_004236781.1	KEGG: ajs:Ajs_3845 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/classII
YP_004236782.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: vap:Vapar_0742 glutathione S-transferase domain protein
YP_004236783.1	KEGG: dia:Dtpsy_3119 phenazine biosynthesis protein PhzF family; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein
YP_004236784.1	KEGG: vei:Veis_0364 hypothetical protein
YP_004236785.1	PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pol:Bpro_4244 lysine exporter protein LysE/YggA
YP_004236786.1	KEGG: xtr:100496602 threo-3-hydroxyaspartate ammonia-lyase-like; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004236787.1	KEGG: dia:Dtpsy_3124 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1
YP_004236788.1	PFAM: Creatininase; KEGG: ajs:Ajs_3852 creatininase
YP_004236789.1	KEGG: pct:PC1_0110 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004236790.1	KEGG: vap:Vapar_2067 PepSY-associated TM helix domain protein
YP_004236791.1	PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: dac:Daci_2896 TonB-dependent receptor
YP_004236792.1	manually curated; KEGG: dia:Dtpsy_1527 hypothetical protein
YP_004236793.1	KEGG: pde:Pden_3223 hypothetical protein
YP_004236794.1	PFAM: Protein of unknown function DUF112, transmembrane; KEGG: bbr:BB0377 hypothetical protein
YP_004236795.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_0735 transcriptional regulator, LysR family
YP_004236796.1	TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; KEGG: vap:Vapar_0734 zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like
YP_004236797.1	KEGG: ajs:Ajs_3853 metal-dependent hydrolases related to alanyl-tRNA synthetase; PFAM: Threonyl/alanyl tRNA synthetase, SAD; Alanyl-tRNA synthetase, class IIc, N-terminal; SMART: Threonyl/alanyl tRNA synthetase, SAD
YP_004236798.1	KEGG: ajs:Ajs_3854 cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane domain
YP_004236799.1	PFAM: Sulphatase-modifying factor; KEGG: dia:Dtpsy_3128 protein of unknown function DUF323
YP_004236800.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rlt:Rleg2_0223 putative transcriptional regulator, TetR family
YP_004236801.1	PFAM: Major facilitator superfamily MFS-1; KEGG: pfo:Pfl01_1662 major facilitator transporter
YP_004236802.1	KEGG: ctt:CtCNB1_2606 hypothetical protein
YP_004236803.1	PFAM: Protein of unknown function DUF2062; KEGG: slt:Slit_1397 protein of unknown function DUF2062
YP_004236804.1	KEGG: xau:Xaut_2660 hypothetical protein
YP_004236805.1	KEGG: dia:Dtpsy_3132 integral membrane protein TerC; TIGRFAM: Integral membrane protein TerC, riboswitch-linked; PFAM: Integral membrane protein TerC
YP_004236806.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_3133 transcriptional regulator, LysR family
YP_004236807.1	PFAM: Protein of unknown function DUF925; KEGG: ctt:CtCNB1_1319 hypothetical protein
YP_004236808.1	PFAM: Acriflavin resistance protein; KEGG: dac:Daci_5653 acriflavin resistance protein
YP_004236809.1	KEGG: dac:Daci_5654 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004236810.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: dac:Daci_5655 TetR family transcriptional regulator
YP_004236811.1	KEGG: dac:Daci_5656 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004236812.1	KEGG: dac:Daci_5657 hypothetical protein
YP_004236813.1	KEGG: vei:Veis_2294 sulfatase; PFAM: Sulfatase
YP_004236814.1	KEGG: vei:Veis_2295 hypothetical protein
YP_004236815.1	KEGG: ctt:CtCNB1_0208 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004236816.1	TIGRFAM: Uroporphyrinogen decarboxylase HemE; KEGG: dac:Daci_0566 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D)
YP_004236817.1	TIGRFAM: Primosomal protein n; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: dia:Dtpsy_3135 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal
YP_004236818.1	KEGG: xcv:XCV2942 outer protein F2
YP_004236819.1	KEGG: xop:PXO_03414 Hpa3
YP_004236820.1	PFAM: Auxin efflux carrier; KEGG: dac:Daci_0559 auxin efflux carrier
YP_004236821.1	PFAM: DNA helicase, UvrD/REP type; KEGG: ctt:CtCNB1_0400 UvrD/REP helicase
YP_004236822.1	KEGG: dia:Dtpsy_3140 phospholipase A1; PFAM: Phospholipase A1
YP_004236823.1	KEGG: dia:Dtpsy_3141 hypothetical protein
YP_004236824.1	PFAM: UspA; KEGG: vei:Veis_0597 UspA domain-containing protein
YP_004236825.1	TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; KEGG: dia:Dtpsy_3143 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase
YP_004236826.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: ajs:Ajs_1800 glutathione S-transferase domain-containing protein
YP_004236827.1	KEGG: bgf:BC1003_3705 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004236828.1	KEGG: psb:Psyr_2215 CheW-like protein; PFAM: CheW-like protein; SMART: CheW-like protein
YP_004236829.1	TIGRFAM: PAS; PFAM: Chemotaxis methyl-accepting receptor, signalling; PAS fold-4; PAS fold-3; KEGG: pst:PSPTO_2441 methyl-accepting chemotaxis protein; SMART: Chemotaxis methyl-accepting receptor, signalling; PAS; PAC motif
YP_004236830.1	KEGG: dia:Dtpsy_3145 hypothetical protein
YP_004236831.1	PFAM: Uncharacterised conserved protein UCP028477; KEGG: dia:Dtpsy_3146 hypothetical protein
YP_004236832.1	KEGG: dac:Daci_0540 hypothetical protein
YP_004236833.1	PFAM: YiaAB two helix; KEGG: dac:Daci_0539 YiaAB two helix domain-containing protein
YP_004236834.1	KEGG: dac:Daci_1311 hypothetical protein
YP_004236835.1	KEGG: dac:Daci_1311 hypothetical protein
YP_004236836.1	KEGG: dia:Dtpsy_3149 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004236837.1	TIGRFAM: 1-aminocyclopropane-1-carboxylate deaminase; KEGG: rsl:RPSI07_mp0523 1-aminocyclopropane-1-carboxylate deaminase (ACC deaminase) (AccD); PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit
YP_004236838.1	KEGG: pol:Bpro_3827 hypothetical protein
YP_004236839.1	KEGG: pct:PC1_0110 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; Snf7; SMART: Chemotaxis methyl-accepting receptor, signalling
YP_004236840.1	KEGG: cak:Caul_3433 hypothetical protein
YP_004236841.1	KEGG: ajs:Ajs_3878 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; Major facilitator superfamily MFS-1; SMART: Phospholipid/glycerol acyltransferase
YP_004236842.1	KEGG: pna:Pnap_0308 hypothetical protein
YP_004236843.1	SMART: Helix-turn-helix type 3; KEGG: dia:Dtpsy_3152 helix-turn-helix domain protein
YP_004236844.1	KEGG: pen:PSEEN3269 hypothetical protein
YP_004236845.1	KEGG: tet:TTHERM_00590250 zinc finger protein
YP_004236846.1	KEGG: rce:RC1_1996 R body protein, putative
YP_004236847.1	KEGG: rce:RC1_1997 R body protein, putative
YP_004236848.1	KEGG: bgf:BC1003_5524 R body protein RebB-like protein
YP_004236849.1	KEGG: bta:520410 leucine rich repeat containing 10B
YP_004236850.1	KEGG: tet:TTHERM_00083650 Ras family protein
YP_004236851.1	KEGG: mxa:MXAN_3210 penicillin-binding protein transpeptidase domain-containing protein
YP_004236852.1	KEGG: vcn:VOLCADRAFT_121079 hypothetical protein
YP_004236853.1	KEGG: tps:THAPSDRAFT_22957 hypothetical protein
YP_004236854.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: rcu:RCOM_1870410 hypothetical protein
YP_004236855.1	KEGG: plu:plu3476 hypothetical protein
YP_004236856.1	KEGG: dia:Dtpsy_3155 hypothetical protein
YP_004236857.1	KEGG: dia:Dtpsy_3156 hypothetical protein
YP_004236858.1	PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase
YP_004236859.1	KEGG: dac:Daci_0531 uncharacterized peroxidase-related enzyme; TIGRFAM: Uncharacterised peroxidase-related; Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase
YP_004236860.1	KEGG: dia:Dtpsy_3159 D-amino-acid dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004236861.1	KEGG: vei:Veis_4934 hypothetical protein; PFAM: FIST domain, N-terminal; FIST C domain; SMART: FIST domain, N-terminal
YP_004236862.1	KEGG: dia:Dtpsy_3161 hypothetical protein
YP_004236863.1	PFAM: Histone-like bacterial DNA-binding protein; KEGG: dia:Dtpsy_3162 histone family protein DNA-binding protein
YP_004236864.1	KEGG: ajs:Ajs_3890 protein tyrosine/serine phosphatase
YP_004236865.1	PFAM: Protein of unknown function DUF2254, membrane; KEGG: pla:Plav_3284 hypothetical protein
YP_004236866.1	KEGG: dac:Daci_4525 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004236867.1	KEGG: dac:Daci_4526 NMT1/THI5-like domain-containing protein
YP_004236868.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4527 binding-protein-dependent transport systems inner membrane component
YP_004236869.1	PFAM: ABC transporter-like; KEGG: dac:Daci_4528 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004236870.1	PFAM: Acyl-CoA reductase; KEGG: bav:BAV0646 acyl-CoA reductase
YP_004236871.1	PFAM: Acyl-protein synthetase, LuxE; KEGG: ctt:CtCNB1_2063 putative acyl protein synthase/acyl-CoA
YP_004236872.1	PFAM: Deoxyribodipyrimidine photolyase-related protein; DNA photolyase, FAD-binding/Cryptochrome, C-terminal; KEGG: bav:BAV1590 DNA photolyase
YP_004236873.1	KEGG: pol:Bpro_0338 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004236874.1	KEGG: pol:Bpro_0337 HipA-like; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, N-terminal; HipA-like, C-terminal
YP_004236875.1	SMART: Ankyrin repeat; manually curated; KEGG: bcm:Bcenmc03_0005 RNA polymerase, sigma 32 subunit, RpoH; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; Ankyrin repeat; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4
YP_004236876.1	PFAM: ATPase-like, ATP-binding domain; KEGG: bcm:Bcenmc03_0006 hypothetical protein
YP_004236877.1	PFAM: Putative endonuclease, Z1 domain; KEGG: bcm:Bcenmc03_0007 hypothetical protein
YP_004236878.1	manually curated; KEGG: bcm:Bcenmc03_0008 hypothetical protein
YP_004236879.1	PFAM: Abortive phage infection; KEGG: bcm:Bcenmc03_0009 hypothetical protein
YP_004236880.1	KEGG: rfr:Rfer_3075 DNA mismatch endonuclease vsr; TIGRFAM: DNA mismatch endonuclease vsr; PFAM: DNA mismatch endonuclease vsr
YP_004236881.1	KEGG: rfr:Rfer_3077 DNA-cytosine methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; PFAM: C-5 cytosine methyltransferase
YP_004236882.1	KEGG: syf:Synpcc7942_0745 hypothetical protein
YP_004236883.1	KEGG: bgf:BC1003_0824 hypothetical protein
YP_004236884.1	KEGG: ddr:Deide_1p00750 putative glucose/sorbosone dehydrogenase, precursor
YP_004236885.1	PFAM: Superoxide dismutase, copper/zinc binding; KEGG: ddr:Deide_1p00740 putative superoxide dismutase
YP_004236886.1	KEGG: bpy:Bphyt_5306 oxidoreductase alpha (molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain
YP_004236887.1	PFAM: Catalase-related subgroup; KEGG: psb:Psyr_1393 hypothetical protein
YP_004236888.1	KEGG: mpt:Mpe_A3331 putative transcription regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3
YP_004236889.1	KEGG: rsl:RPSI07_mp1288 transcriptional repressor which interacts with HipB; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, N-terminal; HipA-like, C-terminal
YP_004236890.1	KEGG: dac:Daci_2160 major facilitator transporter; manually curated; PFAM: Major facilitator superfamily MFS-1
YP_004236891.1	KEGG: dia:Dtpsy_3240 two component transcriptional regulator, fis family; PFAM: Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain
YP_004236892.1	KEGG: dia:Dtpsy_3241 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; HAMP linker domain
YP_004236893.1	KEGG: ajs:Ajs_3893 hypothetical protein
YP_004236894.1	KEGG: vei:Veis_2266 sun protein; TIGRFAM: Fmu, rRNA SAM-dependent methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44
YP_004236895.1	KEGG: dia:Dtpsy_3244 hypothetical protein
YP_004236896.1	TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 4; KEGG: dia:Dtpsy_3245 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase, N-terminal
YP_004236897.1	KEGG: ajs:Ajs_3897 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 7; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain
YP_004236898.1	KEGG: mpt:Mpe_A3452 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal
YP_004236899.1	KEGG: dia:Dtpsy_3248 50S ribosomal protein L10; HAMAP: Ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0
YP_004236901.1	KEGG: dia:Dtpsy_3249 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1
YP_004236902.1	TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; KEGG: vei:Veis_2260 50S ribosomal protein L11; SMART: Ribosomal protein L11
YP_004236903.1	TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: ajs:Ajs_3902 transcription antitermination protein NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW
YP_004236904.1	KEGG: ctt:CtCNB1_0352 preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein
YP_004236905.1	KEGG: vei:Veis_2257 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2
YP_004236906.1	TIGRFAM: Glutathione synthetase, prokaryotic; KEGG: dia:Dtpsy_3256 glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal
YP_004236907.1	KEGG: dia:Dtpsy_3257 benzoate transporter; TIGRFAM: Benzoate membrane transport protein; PFAM: Benzoate membrane transport protein
YP_004236908.1	KEGG: dia:Dtpsy_3258 K potassium transporter; HAMAP: Potassium uptake protein, low affinity, Kup; PFAM: K+ potassium transporter
YP_004236909.1	KEGG: dia:Dtpsy_3259 glutamate/cysteine ligase; TIGRFAM: Glutamate--cysteine ligase GshA; PFAM: Glutamate--cysteine ligase GshA
YP_004236910.1	PFAM: Cation transporter; KEGG: dia:Dtpsy_3260 cation transporter
YP_004236911.1	PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: dia:Dtpsy_3261 potassium transporter peripheral membrane component
YP_004236912.1	TIGRFAM: Gamma-glutamyl phosphate reductase GPR; KEGG: ajs:Ajs_3913 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase domain
YP_004236913.1	KEGG: ctt:CtCNB1_4563 hypothetical protein
YP_004236914.1	KEGG: dda:Dd703_3697 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004236915.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bmj:BMULJ_00557 LysR family transcriptional regulator
YP_004236916.1	KEGG: dia:Dtpsy_3264 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta
YP_004236917.1	PFAM: Lipopolysccharide assembly, LptE; dTDP-4-dehydrorhamnose reductase; KEGG: dia:Dtpsy_3265 rare lipoprotein B
YP_004236918.1	TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: dia:Dtpsy_3266 leucyl-tRNA synthetase
YP_004236919.1	PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: bpd:BURPS668_A2366 peptidase
YP_004236920.1	SMART: Diguanylate cyclase, predicted; PAS; GAF; TIGRFAM: Diguanylate cyclase, predicted; KEGG: lch:Lcho_0530 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: Diguanylate cyclase, predicted
YP_004236921.1	PFAM: Biopolymer transport protein ExbD/TolR; KEGG: ajs:Ajs_3920 biopolymer transport protein ExbD/TolR
YP_004236922.1	PFAM: MotA/TolQ/ExbB proton channel; KEGG: dia:Dtpsy_3269 MotA/TolQ/ExbB proton channel
YP_004236923.1	KEGG: xtr:100491252 dihydrodipicolinate reductase-like; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal
YP_004236924.1	PFAM: Lipoprotein SmpA/OmlA; KEGG: dac:Daci_6008 SmpA/OmlA domain-containing protein
YP_004236925.1	PFAM: Ferric-uptake regulator; KEGG: dia:Dtpsy_3272 ferric uptake regulator, Fur family
YP_004236926.1	KEGG: dia:Dtpsy_3273 HPr kinase/phosphorylase; HAMAP: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal
YP_004236927.1	PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; KEGG: vap:Vapar_0404 putative PTS IIA-like nitrogen-regulatory protein PtsN
YP_004236928.1	KEGG: vap:Vapar_0403 sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein
YP_004236929.1	TIGRFAM: SAICAR synthetase; KEGG: dia:Dtpsy_3276 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase
YP_004236930.1	PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dia:Dtpsy_3278 protein of unknown function DUF306 MetA and HslJ
YP_004236931.1	KEGG: dia:Dtpsy_3279 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain
YP_004236932.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: ajs:Ajs_3934 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core
YP_004236933.1	TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ajs:Ajs_3935 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
YP_004236934.1	KEGG: ajs:Ajs_3936 translation factor SUA5; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5
YP_004236935.1	KEGG: ajs:Ajs_3937 lipase
YP_004236936.1	PFAM: Outer membrane protein, OmpW; KEGG: dac:Daci_0979 OmpW family protein
YP_004236937.1	PFAM: Lipase, GDSL; KEGG: dia:Dtpsy_3287 lipolytic protein G-D-S-L family
YP_004236938.1	TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: ajs:Ajs_3939 D-alanyl-D-alanine carboxypeptidase PBP3; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C
YP_004236939.1	KEGG: ajs:Ajs_3940 peptidase M22, glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease
YP_004236940.1	KEGG: dia:Dtpsy_3290 ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain
YP_004236941.1	PFAM: Uracil-DNA glycosylase-like; KEGG: ajs:Ajs_3942 phage SPO1 DNA polymerase-related protein
YP_004236942.1	KEGG: dia:Dtpsy_3297 magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like
YP_004236943.1	TIGRFAM: MTA/SAH nucleosidase; KEGG: dia:Dtpsy_3298 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: Nucleoside phosphorylase domain
YP_004236944.1	KEGG: dia:Dtpsy_3299 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004236945.1	KEGG: dia:Dtpsy_3302 hypothetical protein
YP_004236946.1	TIGRFAM: Fructose-bisphosphate aldolase, class II, Calvin cycle subtype; Ketose-bisphosphate aldolase, class-II; KEGG: ctt:CtCNB1_4620 fructose-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II
YP_004236947.1	KEGG: dac:Daci_0934 histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain
YP_004236948.1	KEGG: dac:Daci_0933 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236949.1	PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: vei:Veis_0197 PAP2 (acid phosphatase) superfamily protein-like protein
YP_004236950.1	KEGG: dac:Daci_0931 phosphoesterase PA-phosphatase related; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase
YP_004236951.1	TIGRFAM: Pyruvate kinase; KEGG: dia:Dtpsy_3305 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like
YP_004236952.1	KEGG: hse:Hsero_4382 two component sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004236953.1	KEGG: hse:Hsero_4381 two component transcription regulator protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004236954.1	PFAM: Periplasmic binding protein; KEGG: bur:Bcep18194_C7105 ABC Fe3+-hydroxamate transporter, periplasmic ligand binding protein
YP_004236955.1	PFAM: ABC transporter permease protein; KEGG: cvi:CV_1488 ferric citrate transport system permease protein
YP_004236956.1	PFAM: ABC transporter-like; KEGG: bbr:BB4241 putative ABC transport ATP-binding subunit; SMART: ATPase, AAA+ type, core
YP_004236957.1	KEGG: vap:Vapar_1535 azurin; TIGRFAM: Azurin, proteobacteria; PFAM: Blue (type 1) copper domain
YP_004236958.1	PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; KEGG: dia:Dtpsy_3306 peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein
YP_004236959.1	KEGG: lch:Lcho_1358 molybdate ABC transporter, ATPase subunit
YP_004236960.1	PFAM: PspA/IM30; KEGG: rlg:Rleg_3144 phage shock protein A, PspA
YP_004236961.1	PFAM: Protein of unknown function DUF1449; KEGG: pna:Pnap_3021 hypothetical protein
YP_004236962.1	KEGG: pna:Pnap_3022 band 7 protein; PFAM: Band 7 protein; SMART: Band 7 protein
YP_004236963.1	PFAM: Nucleotidyl transferase; KEGG: dia:Dtpsy_3308 nucleotidyl transferase
YP_004236964.1	KEGG: vap:Vapar_5260 S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal
YP_004236965.1	SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: dia:Dtpsy_3309 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal
YP_004236966.1	KEGG: cro:ROD_38071 hypothetical protein
YP_004236967.1	PFAM: Protein of unknown function DUF1493; KEGG: bac:BamMC406_0835 hypothetical protein
YP_004236968.1	SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ajs:Ajs_3960 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
YP_004236969.1	PFAM: Major facilitator superfamily MFS-1; KEGG: vap:Vapar_3886 major facilitator superfamily MFS_1
YP_004236970.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ctt:CtCNB1_2546 transcriptional regulator, LysR family
YP_004236971.1	KEGG: nhl:Nhal_2790 hypothetical protein
YP_004236972.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tbd:Tbd_0244 outer membrane protein
YP_004236973.1	PFAM: Protein of unknown function DUF924; KEGG: ajs:Ajs_3961 hypothetical protein
YP_004236974.1	PFAM: Radical SAM; KEGG: xca:xccb100_3851 hypothetical protein
YP_004236975.1	KEGG: nar:Saro_2039 uracil-DNA glycosylase superfamily protein
YP_004236976.1	PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; KEGG: dia:Dtpsy_3312 ribosomal subunit interface protein, putative
YP_004236977.1	PFAM: Peptidase C26; KEGG: dia:Dtpsy_3313 peptidase C26
YP_004236978.1	KEGG: bmn:BMA10247_0678 hypothetical protein; PFAM: Spore coat protein U; SMART: Spore coat protein U
YP_004236979.1	KEGG: bpr:GBP346_A1661 spore coat protein U domain protein
YP_004236980.1	KEGG: pfs:PFLU3902 putative fimbriae-assembly chaperone
YP_004236981.1	PFAM: Fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl01_3669 fimbrial biogenesis outer membrane usher protein
YP_004236982.1	KEGG: bte:BTH_I2676 spore coat protein U domain-contain protein; PFAM: Spore coat protein U; SMART: Spore coat protein U
YP_004236983.1	KEGG: dia:Dtpsy_3314 peptidylprolyl isomerase, FKBP-type
YP_004236984.1	PFAM: Pirin, N-terminal; Pirin, C-terminal; KEGG: ajs:Ajs_3965 pirin domain-containing protein
YP_004236985.1	PFAM: ChaC-like protein; KEGG: rsl:RPSI07_mp1017 putative type III effector protein
YP_004236986.1	KEGG: ago:AGOS_AGL034C hypothetical protein
YP_004236987.1	KEGG: art:Arth_0754 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding
YP_004236988.1	PFAM: Mechanosensitive ion channel MscS; KEGG: dia:Dtpsy_3357 MscS mechanosensitive ion channel
YP_004236989.1	KEGG: dia:Dtpsy_3317 hypothetical protein
YP_004236990.1	PFAM: Sulfatase; KEGG: vap:Vapar_3401 sulfatase
YP_004236991.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: dia:Dtpsy_3318 short-chain dehydrogenase/reductase SDR
YP_004236992.1	KEGG: xcv:XCV0285 hypothetical protein
YP_004236993.1	PFAM: Exopolysaccharide synthesis, ExoD; KEGG: pzu:PHZ_c1367 probable exopolysaccharide synthesis protein
YP_004236994.1	KEGG: pfl:PFL_5007 hypothetical protein
YP_004236995.1	KEGG: dia:Dtpsy_3319 hypothetical protein
YP_004236996.1	PFAM: NERD; DNA helicase, UvrD/REP type; KEGG: dac:Daci_3682 NERD domain-containing protein
YP_004236997.1	PFAM: Methyltransferase type 12; KEGG: ajs:Ajs_2324 methyltransferase type 11
YP_004236998.1	PFAM: Alpha/beta hydrolase fold-1; KEGG: bpm:BURPS1710b_0554 lactonase
YP_004236999.1	PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rfr:Rfer_4015 glyoxalase/bleomycin resistance protein/dioxygenase
YP_004237000.1	KEGG: rso:RSc3212 hypothetical protein; TIGRFAM: Peptidase C58, YopT; PFAM: Peptidase C58, YopT/NopT
YP_004237001.1	PFAM: RDD; KEGG: dac:Daci_0891 RDD domain-containing protein
YP_004237002.1	PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: pol:Bpro_4758 filamentation induced by cAMP protein Fic
YP_004237003.1	KEGG: avi:Avi_2367 hypothetical protein
YP_004237004.1	KEGG: cre:CHLREDRAFT_144091 hypothetical protein
YP_004237005.1	SMART: DNA topoisomerase, type IA, DNA-binding; SWIB domain; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase III, bacterial-type; KEGG: ajs:Ajs_3990 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; SWIB/MDM2 domain; Toprim domain
YP_004237006.1	KEGG: ajs:Ajs_3991 nuclear protein SET; PFAM: SET domain; SMART: SET domain; Post-SET domain
YP_004237007.1	KEGG: ctt:CtCNB1_4787 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal
YP_004237008.1	KEGG: dia:Dtpsy_3342 sporulation domain protein
YP_004237009.1	KEGG: xcb:XC_1553 leucin rich protein
YP_004237010.1	KEGG: xca:xccb100_1596 leucine-rich repeat protein
YP_004237011.1	PFAM: N-formylglutamate amidohydrolase; KEGG: ajs:Ajs_3995 N-formylglutamate amidohydrolase
YP_004237012.1	manually curated; KEGG: dia:Dtpsy_3346 hypothetical protein
YP_004237013.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_3347 transcriptional regulator, LysR family
YP_004237014.1	KEGG: vap:Vapar_4417 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004237015.1	KEGG: dac:Daci_5738 adenylate/guanylate cyclase; PFAM: Adenylyl cyclase class-3/4/guanylyl cyclase; Ferredoxin; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase
YP_004237016.1	KEGG: dac:Daci_5737 hypothetical protein
YP_004237017.1	KEGG: dac:Daci_5737 hypothetical protein
YP_004237018.1	KEGG: ajs:Ajs_3998 integral membrane sensor signal transduction histidine kinase; PFAM: Two-component sensor kinase N-terminal; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004237019.1	KEGG: dia:Dtpsy_3349 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal
YP_004237020.1	PFAM: HTH transcriptional regulator, MarR; KEGG: ajs:Ajs_4000 MarR family transcriptional regulator
YP_004237021.1	TIGRFAM: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA; KEGG: dia:Dtpsy_3351 RecA protein; SMART: ATPase, AAA+ type, core
YP_004237022.1	PFAM: Regulatory protein RecX; KEGG: dia:Dtpsy_3352 regulatory protein RecX
YP_004237023.1	PFAM: Protein of unknown function DUF1631; KEGG: dia:Dtpsy_3353 hypothetical protein
YP_004237024.1	KEGG: dia:Dtpsy_3354 preprotein translocase subunit SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal
YP_004237025.1	KEGG: dia:Dtpsy_3355 preprotein translocase subunit SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal
YP_004237026.1	KEGG: dia:Dtpsy_3356 preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC
YP_004237027.1	manually curated; KEGG: dac:Daci_3862 hypothetical protein
YP_004237028.1	PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; KEGG: ajs:Ajs_4008 indolepyruvate ferredoxin oxidoreductase
YP_004237029.1	KEGG: dia:Dtpsy_3359 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type
YP_004237030.1	manually curated; KEGG: mca:MCA0595 hypothetical protein
YP_004237031.1	PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: dia:Dtpsy_3362 protein of unknown function DUF894 DitE
YP_004237032.1	KEGG: pno:SNOG_09136 hypothetical protein
YP_004237033.1	KEGG: pop:POPTR_585301 hypothetical protein
YP_004237034.1	KEGG: ajs:Ajs_4013 MltA domain-containing protein; PFAM: Lytic transglycosylase MltA; 3D; SMART: Lytic transglycosylase MltA
YP_004237035.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dia:Dtpsy_3364 OmpA/MotB domain protein
YP_004237036.1	KEGG: vei:Veis_4829 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal
YP_004237037.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: dia:Dtpsy_3366 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
YP_004237038.1	PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dia:Dtpsy_3367 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
YP_004237039.1	TIGRFAM: Conserved hypothetical protein CHP02099; KEGG: dia:Dtpsy_3368 hypothetical protein
YP_004237040.1	KEGG: dia:Dtpsy_3369 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase, repeated domain; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
YP_004237041.1	TIGRFAM: Amino acid adenylation; Thioester reductase; KEGG: bbt:BBta_4110 putative non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Male sterility, NAD-binding; Phosphopantetheine-binding; Condensation domain
YP_004237042.1	PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28; KEGG: bbt:BBta_4109 putative glycosyltransferase
YP_004237043.1	KEGG: fre:Franean1_5943 MbtH domain-containing protein; PFAM: MbtH-like protein; SMART: MbtH-like protein
YP_004237044.1	PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Transcription regulator YbiH, C-terminal; KEGG: ajs:Ajs_4020 TetR family transcriptional regulator
YP_004237045.1	KEGG: dia:Dtpsy_3371 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein
YP_004237046.1	KEGG: dia:Dtpsy_3372 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD
YP_004237047.1	PFAM: Acriflavin resistance protein; KEGG: dia:Dtpsy_3373 acriflavin resistance protein
YP_004237048.1	KEGG: spw:SPCG_1750 cell wall surface anchor family protein
YP_004237049.1	KEGG: rfr:Rfer_4051 HD-GYP domain-containing protein
YP_004237050.1	KEGG: dia:Dtpsy_3374 glutathione peroxidase; PFAM: Glutathione peroxidase
YP_004237051.1	PFAM: Glutathione S-transferase, N-terminal; Glutathione S-transferase, C-terminal; KEGG: dia:Dtpsy_3375 glutathione S-transferase domain protein
YP_004237052.1	TIGRFAM: Adenylosuccinate lyase; KEGG: dia:Dtpsy_3376 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal/plant
YP_004237053.1	PFAM: YaeQ; KEGG: dia:Dtpsy_3377 YaeQ family protein
YP_004237054.1	KEGG: dia:Dtpsy_3378 hypothetical protein
YP_004237055.1	PFAM: Protein of unknown function DUF1289; KEGG: dia:Dtpsy_3379 protein of unknown function DUF1289
YP_004237056.1	KEGG: ajs:Ajs_4030 integral membrane protein TerC; TIGRFAM: Integral membrane protein YjbE; PFAM: Integral membrane protein TerC
YP_004237057.1	KEGG: ajs:Ajs_4031 hypothetical protein
YP_004237058.1	PFAM: Membrane protein of unknown function; KEGG: dia:Dtpsy_3382 membrane protein of unknown function
YP_004237059.1	PFAM: Peptidase M48; KEGG: dia:Dtpsy_3383 peptidase M48 Ste24p
YP_004237060.1	KEGG: xtr:100494583 molybdenum cofactor biosynthesis protein C-like; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain
YP_004237061.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004237062.1	manually curated; KEGG: dac:Daci_4478 putative TIS1421-transposase orfA protein
YP_004237063.1	KEGG: ajs:Ajs_4039 FimB
YP_004237064.1	PFAM: O-antigen ligase-related; KEGG: rfr:Rfer_1264 O-antigen polymerase
YP_004237065.1	PFAM: Fimbrial protein pilin; Prepilin-type cleavage/methylation, N-terminal; KEGG: vap:Vapar_5185 protein involved in methylation
YP_004237066.1	KEGG: ajs:Ajs_4043 FHA domain-containing protein; PFAM: Forkhead-associated (FHA) domain; SMART: Forkhead-associated (FHA) domain
YP_004237067.1	KEGG: dia:Dtpsy_3389 protein serine/threonine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like
YP_004237068.1	KEGG: ctt:CtCNB1_4773 integral membrane protein TerC; TIGRFAM: Integral membrane protein YjbE; PFAM: Integral membrane protein TerC
YP_004237069.1	SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: xtr:100488810 succinyl-CoA ligase [ADP-forming] subunit alpha-like; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding
YP_004237070.1	TIGRFAM: Succinyl-CoA synthetase, beta subunit; KEGG: dia:Dtpsy_3392 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase
YP_004237071.1	SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 2; KEGG: dia:Dtpsy_3393 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding
YP_004237072.1	KEGG: dia:Dtpsy_3394 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A
YP_004237073.1	KEGG: ajs:Ajs_4050 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup
YP_004237074.1	KEGG: dia:Dtpsy_3396 peptide deformylase; TIGRFAM: Formylmethionine deformylase; PFAM: Formylmethionine deformylase
YP_004237075.1	KEGG: dia:Dtpsy_3397 putative lipoprotein transmembrane
YP_004237076.1	TIGRFAM: Methionyl-tRNA formyltransferase; KEGG: ajs:Ajs_4053 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal
YP_004237077.1	PFAM: Branched-chain amino acid transport, permease; KEGG: dia:Dtpsy_3399 AzlC family protein
YP_004237078.1	PFAM: Branched-chain amino acid transport, AzlD; KEGG: dia:Dtpsy_3400 branched-chain amino acid transport
YP_004237079.1	KEGG: dia:Dtpsy_3401 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004237080.1	SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; KEGG: ajs:Ajs_4058 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain
YP_004237081.1	KEGG: dds:Ddes_1247 hypothetical protein
YP_004237082.1	KEGG: dac:Daci_3853 hypothetical protein
YP_004237083.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dia:Dtpsy_3404 transcriptional regulator, LysR family
YP_004237084.1	KEGG: dia:Dtpsy_3405 hypothetical protein
YP_004237085.1	PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: dia:Dtpsy_3406 hypothetical protein
YP_004237086.1	PFAM: Small multidrug resistance protein; KEGG: dac:Daci_5038 small multidrug resistance protein
YP_004237087.1	PFAM: Drug/metabolite transporter; KEGG: ajs:Ajs_1054 hypothetical protein
YP_004237088.1	KEGG: ajs:Ajs_4062 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain
YP_004237089.1	PFAM: Protein of unknown function DUF1800; KEGG: dac:Daci_4494 hypothetical protein
YP_004237090.1	PFAM: Protein of unknown function DUF1501; KEGG: dac:Daci_4495 hypothetical protein
YP_004237091.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_4979 LysR family transcriptional regulator
YP_004237092.1	KEGG: dac:Daci_4980 hypothetical protein
YP_004237093.1	KEGG: dac:Daci_4981 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA
YP_004237094.1	PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal; KEGG: dac:Daci_4982 mandelate racemase/muconate lactonizing protein; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal
YP_004237095.1	KEGG: ctt:CtCNB1_3908 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase
YP_004237096.1	KEGG: pol:Bpro_2838 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004237097.1	PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; KEGG: pol:Bpro_2839 tripartite ATP-independent periplasmic transporter DctQ
YP_004237098.1	KEGG: pol:Bpro_2840 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit
YP_004237099.1	KEGG: pol:Bpro_2842 hypothetical protein
YP_004237100.1	KEGG: cti:RALTA_A1657 putative extracellular solute-binding protein, TRAP transporter family, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria
YP_004237101.1	PFAM: Amidohydrolase 2; KEGG: pol:Bpro_2843 amidohydrolase 2
YP_004237102.1	KEGG: smd:Smed_4293 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI
YP_004237103.1	SMART: Cytochrome b561/ferric reductase transmembrane; KEGG: reh:H16_A3010 cytochrome b561/ferric reductase transmembrane domain-containing protein
YP_004237104.1	PFAM: ABC transporter-like; Transport-associated OB, type 2; KEGG: vap:Vapar_3347 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004237105.1	PFAM: Bacterial extracellular solute-binding, family 1; KEGG: vap:Vapar_3348 extracellular solute-binding protein family 1
YP_004237106.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3349 binding-protein-dependent transport systems inner membrane component
YP_004237107.1	PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: vap:Vapar_3350 binding-protein-dependent transport systems inner membrane component
YP_004237108.1	KEGG: vap:Vapar_3342 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_004237109.1	KEGG: vei:Veis_2714 hypothetical protein
YP_004237110.1	KEGG: ctt:CtCNB1_3093 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004237111.1	TIGRFAM: Excinuclease ABC, A subunit; HAMAP: Excinuclease ABC, A subunit; KEGG: ajs:Ajs_4064 excinuclease ABC subunit A; PFAM: ABC transporter-like
YP_004237112.1	TIGRFAM: Adenylylsulphate kinase, C-terminal; KEGG: dac:Daci_3191 adenylyl-sulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal
YP_004237113.1	KEGG: isc:IscW_ISCW000125 40S ribosomal protein S27A, putative; PFAM: Ubiquitin; SMART: Ubiquitin
YP_004237114.1	PFAM: Major facilitator superfamily MFS-1; KEGG: ajs:Ajs_4065 major facilitator superfamily transporter
YP_004237115.1	PFAM: Chloride channel, voltage gated; KEGG: pop:POPTR_589000 Cl-channel clc-7
YP_004237116.1	KEGG: ajs:Ajs_4066 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding
YP_004237117.1	TIGRFAM: Restriction endonuclease, type I, EcoRI, R subunit; PFAM: Protein of unknown function DUF3387; Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: pol:Bpro_1944 HsdR family type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal
YP_004237118.1	PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: rfr:Rfer_4037 filamentation induced by cAMP protein Fic
YP_004237119.1	KEGG: bvi:Bcep1808_0005 hypothetical protein
YP_004237120.1	KEGG: saz:Sama_2780 hypothetical protein
YP_004237121.1	KEGG: acr:Acry_2420 hypothetical protein
YP_004237122.1	KEGG: mpt:Mpe_A0006 restriction modification system, type I; manually curated; PFAM: Restriction endonuclease, type I, S subunit, EcoBI
YP_004237123.1	KEGG: pna:Pnap_4777 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal
YP_004237124.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rme:Rmet_4244 LysR family transcriptional regulator
YP_004237125.1	PFAM: Thioesterase; KEGG: rme:Rmet_4241 alpha/beta hydrolase fold protein
YP_004237126.1	KEGG: rme:Rmet_4242 extra-cytoplasmic solute receptor
YP_004237127.1	KEGG: avi:Avi_2874 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR
YP_004237128.1	KEGG: xal:XALc_2225 putative sensor protein; PFAM: Diguanylate phosphodiesterase, EAL domain; GAF; SMART: Diguanylate phosphodiesterase, EAL domain; GAF
YP_004237129.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: vap:Vapar_0231 transcriptional regulator, LysR family
YP_004237130.1	PFAM: Drug/metabolite transporter; KEGG: vap:Vapar_0232 protein of unknown function DUF6 transmembrane
YP_004237131.1	KEGG: ppl:POSPLDRAFT_135140 hypothetical fungal pheromone GPCR, STE3-type
YP_004237132.1	KEGG: sco:SCO3559 oxidoreductase
YP_004237133.1	PFAM: Protein of unknown function DUF599; KEGG: pol:Bpro_4848 hypothetical protein
YP_004237134.1	PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: rpi:Rpic_0313 protein of unknown function DUF395 YeeE/YedE
YP_004237135.1	PFAM: Domain of unknown function DUF395, YeeE/YedE; KEGG: mpt:Mpe_A2718 hypothetical protein
YP_004237136.1	KEGG: vap:Vapar_5567 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR
YP_004237137.1	KEGG: reh:H16_A1980 hydroxyacylglutathione hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like
YP_004237138.1	KEGG: cfl:Cfla_0677 serine/threonine protein kinase
YP_004237139.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: atu:Atu0989 hypothetical protein; SMART: Diguanylate cyclase, predicted
YP_004237140.1	KEGG: vap:Vapar_4824 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR
YP_004237141.1	PFAM: Citrate synthase-like; KEGG: vap:Vapar_4823 citrate synthase
YP_004237142.1	KEGG: vap:Vapar_4822 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase
YP_004237143.1	KEGG: vap:Vapar_4821 hypothetical protein
YP_004237144.1	PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: vap:Vapar_4820 transcriptional regulator, IclR family
YP_004237145.1	KEGG: ajs:Ajs_4067 L-lactate transport; TIGRFAM: L-lactate permease; PFAM: L-lactate permease
YP_004237146.1	KEGG: xac:XAC2197 hemolysin-type calcium-binding protein; PFAM: Putative Ig; Haemolysin-type calcium binding-related; Haemolysin-type calcium-binding repeat; SMART: Dystroglycan-type cadherin-like
YP_004237147.1	KEGG: app:CAP2UW1_0456 hypothetical protein
YP_004237148.1	KEGG: xac:XAC2200 hypothetical protein
YP_004237149.1	KEGG: xac:XAC2201 hemolysin secretion protein D
YP_004237150.1	KEGG: dia:Dtpsy_3413 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA-specific 2-thiouridylase; PFAM: tRNA-specific 2-thiouridylase
YP_004237151.1	PFAM: NUDIX hydrolase domain; KEGG: ajs:Ajs_4074 NUDIX hydrolase
YP_004237152.1	PFAM: Drug/metabolite transporter; KEGG: rme:Rmet_5748 hypothetical protein
YP_004237153.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: kpu:KP1_2302 putative LysR family regulatory protein
YP_004237154.1	KEGG: xcv:XCV0572 outer protein X
YP_004237155.1	PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: dia:Dtpsy_3428 GCN5-related N-acetyltransferase
YP_004237156.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; HAMP linker domain; KEGG: hse:Hsero_1913 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted; HAMP linker domain
YP_004237157.1	TIGRFAM: Lumazine-binding protein; KEGG: xtr:100496516 riboflavin synthase alpha chain-like; PFAM: Lumazine-binding protein
YP_004237158.1	TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; KEGG: mch:Mchl_5380 multi-sensor hybrid histidine kinase; SMART: ATPase-like, ATP-binding domain; GAF; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain
YP_004237159.1	KEGG: vap:Vapar_5264 hypothetical protein
YP_004237160.1	PFAM: Protein of unknown function DUF2127; KEGG: pna:Pnap_0381 hypothetical protein
YP_004237161.1	PFAM: Siderophore-interacting protein; FAD-binding 9, siderophore-interacting; KEGG: vap:Vapar_3586 siderophore-interacting protein
YP_004237162.1	PFAM: Transcription regulator PadR N-terminal-like; KEGG: vap:Vapar_3585 transcriptional regulator, PadR-like family
YP_004237163.1	PFAM: Amine oxidase; KEGG: ajs:Ajs_4093 twin-arginine translocation pathway signal
YP_004237164.1	PFAM: Spermine synthase; manually curated; KEGG: ajs:Ajs_4094 spermidine synthase; HAMAP: Spermine synthase
YP_004237165.1	KEGG: dac:Daci_4786 TonB-dependent siderophore receptor; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug
YP_004237166.1	manually curated; KEGG: net:Neut_1369 hypothetical protein
YP_004237167.1	KEGG: lch:Lcho_0815 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal
YP_004237168.1	PFAM: Protein of unknown function DUF350; KEGG: mpt:Mpe_A0248 hypothetical protein
YP_004237169.1	KEGG: dia:Dtpsy_3448 putative transmembrane protein
YP_004237170.1	PFAM: Band 7 protein; KEGG: dia:Dtpsy_3449 band 7 protein
YP_004237171.1	PFAM: Protein of unknown function DUF2061, membrane; KEGG: ajs:Ajs_4100 hypothetical protein
YP_004237173.1	PFAM: Flagellar basal body rod protein, N-terminal; Domain of unknown function DUF1078, C-terminal; KEGG: dia:Dtpsy_3453 flagellar basal body rod protein
YP_004237174.1	KEGG: lpp:lpp2642 hypothetical protein
YP_004237175.1	KEGG: dac:Daci_3852 hypothetical protein
YP_004237176.1	KEGG: dac:Daci_3853 hypothetical protein
YP_004237177.1	PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_4102 LysR family transcriptional regulator
YP_004237178.1	KEGG: ajs:Ajs_4103 beta alanine--pyruvate transaminase; PFAM: Aminotransferase class-III
YP_004237179.1	PFAM: ThiJ/PfpI; KEGG: pol:Bpro_4238 DJ-1/PfpI family protein
YP_004237180.1	TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: dia:Dtpsy_3456 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain
YP_004237181.1	PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: azo:azo1306 hypothetical protein
YP_004237182.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; MASE2; KEGG: rfr:Rfer_4030 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004237183.1	KEGG: dia:Dtpsy_3457 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR
YP_004237184.1	PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_3458 extracellular ligand-binding receptor
YP_004237185.1	PFAM: ABC transporter permease; KEGG: dia:Dtpsy_3459 inner-membrane translocator
YP_004237186.1	PFAM: ABC transporter permease; KEGG: dac:Daci_6025 inner-membrane translocator
YP_004237187.1	PFAM: ABC transporter-like; KEGG: dac:Daci_6026 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004237188.1	PFAM: ABC transporter-like; KEGG: dac:Daci_6027 ABC transporter related; SMART: ATPase, AAA+ type, core
YP_004237189.1	TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dia:Dtpsy_3463 amidase, hydantoinase/carbamoylase family; PFAM: Peptidase M20
YP_004237190.1	PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; KEGG: dac:Daci_6029 MlrC domain-containing protein
YP_004237191.1	KEGG: pap:PSPA7_3448 hypothetical protein
YP_004237192.1	KEGG: ecb:100052406 similar to LIM domain binding 3
YP_004237193.1	KEGG: ajs:Ajs_4106 malic enzyme; PFAM: Phosphate acetyl/butaryl transferase; Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding
YP_004237194.1	PFAM: Guanine-specific ribonuclease N1/T1; KEGG: dia:Dtpsy_3466 guanine-specific ribonuclease N1 and T1
YP_004237195.1	PFAM: Barstar (barnase inhibitor); KEGG: dia:Dtpsy_3467 barstar (barnase inhibitor)
YP_004237196.1	TIGRFAM: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; KEGG: dia:Dtpsy_3468 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal
YP_004237197.1	PFAM: SurA N-terminal; Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: dia:Dtpsy_3469 SurA domain protein
YP_004237198.1	KEGG: dia:Dtpsy_3470 organic solvent tolerance protein; HAMAP: Lipopolysccharide assembly, LptD; PFAM: Organic solvent tolerance protein, C-terminal
YP_004237199.1	PFAM: Aminoglycoside phosphotransferase; KEGG: ajs:Ajs_4113 aminoglycoside phosphotransferase
YP_004237200.1	KEGG: dia:Dtpsy_3472 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E
YP_004237201.1	KEGG: ajs:Ajs_4115 hypothetical protein
YP_004237202.1	KEGG: ajs:Ajs_4116 hypothetical protein
YP_004237203.1	PFAM: RecF/RecN/SMC; KEGG: dia:Dtpsy_3475 SMC domain protein
YP_004237204.1	KEGG: bpr:GBP346_A2515 hypothetical protein
YP_004237205.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: ajs:Ajs_4119 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004237206.1	PFAM: Major facilitator superfamily MFS-1; KEGG: eba:ebA5710 putative MFS permease family protein
YP_004237207.1	KEGG: dac:Daci_3862 hypothetical protein
YP_004237208.1	PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: ajs:Ajs_4121 peptidase M20
YP_004237209.1	KEGG: rpd:RPD_2980 ethanolamine permease; TIGRFAM: Ethanolamine permease; PFAM: Amino acid permease domain
YP_004237210.1	KEGG: rpd:RPD_2981 ethanolamine ammonia lyase large subunit; PFAM: Ethanolamine ammonia lyase large subunit
YP_004237211.1	KEGG: vap:Vapar_3277 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain
YP_004237212.1	TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dia:Dtpsy_3480 diguanylate cyclase; SMART: Diguanylate cyclase, predicted
YP_004237213.1	KEGG: dia:Dtpsy_3482 methionine biosynthesis protein MetW; TIGRFAM: Methionine biosynthesis MetW; PFAM: Methionine biosynthesis MetW
YP_004237214.1	TIGRFAM: Homoserine acetyltransferase; KEGG: ajs:Ajs_4125 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1
YP_004237215.1	PFAM: Uncharacterised protein family UPF0016; KEGG: dia:Dtpsy_3484 protein of unknown function UPF0016
YP_004237216.1	KEGG: vei:Veis_0149 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif domain; SMART: RNA recognition motif domain
YP_004237217.1	KEGG: vei:Veis_0150 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif domain; SMART: RNA recognition motif domain
YP_004237218.1	PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ajs:Ajs_4129 short chain dehydrogenase
YP_004237219.1	PFAM: Lipopolysccharide assembly, LptC-related; KEGG: dia:Dtpsy_3488 protein of unknown function DUF1239
YP_004237220.1	KEGG: dia:Dtpsy_3489 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
YP_004237221.1	SMART: Cystathionine beta-synthase, core; TIGRFAM: KpsF/GutQ; KEGG: vei:Veis_0154 KpsF/GutQ family protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core
YP_004237222.1	PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: ajs:Ajs_4133 potassium efflux system protein
YP_004237223.1	KEGG: dia:Dtpsy_3492 adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase
YP_004237224.1	PFAM: Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; KEGG: dac:Daci_0530 flavodoxin/nitric oxide synthase
YP_004237225.1	KEGG: ajs:Ajs_4136 hypothetical protein
YP_004237226.1	KEGG: dia:Dtpsy_3494 cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain
YP_004237227.1	KEGG: ajs:Ajs_4138 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related
YP_004237228.1	PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: ajs:Ajs_4139 extracellular solute-binding protein
YP_004237229.1	KEGG: dia:Dtpsy_3542 YidC translocase/secretase; TIGRFAM: Membrane insertion protein, OxaA/YidC, bacterial; Membrane insertion protein, OxaA/YidC; PFAM: Membrane insertion protein, OxaA/YidC
YP_004237230.1	KEGG: ctt:CtCNB1_4801 hypothetical protein; TIGRFAM: Protein of unknown function DUF37; PFAM: Protein of unknown function DUF37
YP_004237231.1	PFAM: Ribonuclease P; KEGG: dia:Dtpsy_3544 hypothetical protein
YP_004237232.1	TIGRFAM: Ribosomal protein L34; HAMAP: Ribosomal protein L34; KEGG: vei:Veis_5015 50S ribosomal protein L34; PFAM: Ribosomal protein L34