-- dump date   	20140618_185028
-- class       	Genbank::Gene
-- table       	gene_note
-- id	note
7135628	cell division topological specificity factor MinE, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7134306	mannosyltransferase, putative, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to PIR:S22620
7136887	plasmid stability protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P55511
7134935	transporter AcrB/AcrD/AcrF family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO90606.1
7134147	cell division protein FtsK, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
7134797	phage integrase family protein, degenerate; this region contains one or more premature stops and/or frameshifts
7135649	oxidoreductase, aldo/keto reductase family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAM42939.1
7135728	general secretion pathway protein A, putative, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P45754
7136099	site-specific recombinase, phage integrase family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P10487
7134109	group II intron maturase, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:AAB68949.1
7137155	phenazine biosynthesis protein, PhzF family, degenerate; this region contains one or more premature stops and/or frameshifts
7135272	transposition helper protein, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7136989	oxidoreductase, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO64293.1
7134485	aminotransferase, class II, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:Q08432
7134077	shufflon-specific DNA recombinase, putative, degenerate; this region contains one or more premature stops and/or frameshifts
7136001	peptidyl-prolyl cis-trans isomerse D, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P77241
7135451	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO53604.1
7137099	mannose-1-phosphate guanylyltransferase, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P37741
7136081	This gene is disrupted by a mobile element; transposase, interruption-C; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q51761
7134011	This gene is disrupted by a mobile element; transposase, interruption-N; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q51761
7135162	type I restriction-modification system, M subunit, degenerate; this region contains one or more premature stops and/or frameshifts
7136389	conserved hypothetical protein, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:CAD86417.1
7134895	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAO58003.1
7134293	transposase, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7135320	transposase, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7135102	ISAfe7, transposase orfB, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
7137056	conserved hypothetical protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to PIR:H82648
7135507	conjugal transfer protein, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P54917
7136384	plasmid stabilization protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to PIR:A82602
7135263	transcriptional regulator, putative, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:BAB47691.1
7137302	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, putative, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P26281
7134404	undecaprenyl-phosphate galactosephosphotransferase, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P26406
7136973	DNA polymerase, bacteriophage-type, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:CAE35782.1
7135590	polynucleotide kinase, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P06855
7135479	conserved hypothetical protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:AAO90046.1
7136774	conserved hypothetical protein, authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; identified by similarity to GB:BAB50151.1
7135639	transposase, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:AAM09905.1
7136471	conserved hypothetical protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
7137160	phospholipase C, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P15713
7135326	ABC transporter ATP-binding protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAP29241.1
7135033	transposase, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7134904	competence protein ComM, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P45049
7134224	reverse transcriptase, putative, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q47688
7137047	conserved hypothetical protein, truncation; comparison of this gene to its homologs suggests this gene has been truncated
7134230	mercuric reductase, degenerate; this region contains one or more premature stops and/or frameshifts
7136977	cation-transporting P-type ATPase, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P77894
7135220	transposase, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:AAF65225.1
7136344	mercuric resistance protein merE, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
7134322	mercuric resistence transcriptional repressor protein MerD, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to SP:P06689
7134979	competence protein ComM, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P45049; match to protein family HMM PF01078
7136190	oxidoreductase, 2-nitropropane dioxygenase family, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:AAP86007.1
7136514	PIN domain protein, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:CAD84409.1
7135322	cation efflux system protein, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to SP:P38054
7134191	transposase, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to GB:AAR33383.1
7134926	ISAfe4, transposase orf3, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error
7135916	transcriptional regulator, putative, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GB:BAB47691.1
7134724	reductase, putative, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:P16543
7136393	In addition to frameshifts, this gene is disrupted by an IS element which is itself disrupted by an IS element; transposase, interruption-N; this region contains one or more premature stops and/or frameshifts
7134874	This gene is disrupted by an IS element; transposase, interruption-N; this region contains one or more premature stops and/or frameshifts
7136209	This gene is disrupted by an IS element; transposase, interruption-C; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF01609
7136388	In addition to frameshifts, this gene is disrupted by an IS element which is itself disrupted by an IS element; transposase, interruption-C; this region contains one or more premature stops and/or frameshifts; identified by match to protein family HMM PF01609
7136833	trag protein, putative, degenerate; this region contains one or more premature stops and/or frameshifts; identified by similarity to SP:Q00184
7135398	site-specific recombinase, phage integrase family, truncation; comparison of this gene to its homologs suggests this gene has been truncated; identified by similarity to GB:BAC46135.1