-- dump date 20140618_185030 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002424516.1 218667577 7135870 86..1183 1 NC_011761.1 identified by similarity to SP:P00583; match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 1183 dnaN 7135870 dnaN Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit beta YP_002424516.1 86 D 243159 CDS YP_002424517.1 218666274 7135748 1185..2237 1 NC_011761.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF 2237 7135748 AFE_0002 Acidithiobacillus ferrooxidans ATCC 23270 DNA replication and repair protein RecF YP_002424517.1 1185 D 243159 CDS YP_002424518.1 218665824 7136631 2237..4639 1 NC_011761.1 identified by similarity to SP:P06982; match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 4639 gyrB 7136631 gyrB Acidithiobacillus ferrooxidans ATCC 23270 DNA gyrase subunit B YP_002424518.1 2237 D 243159 CDS YP_002424519.1 218667844 7135378 4784..8290 1 NC_011761.1 identified by similarity to GB:AAO90130.1; hypothetical protein 8290 7135378 AFE_0004 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424519.1 4784 D 243159 CDS YP_002424520.1 218666859 7134922 8385..8897 1 NC_011761.1 identified by similarity to SP:P27755; match to protein family HMM PF05229; spore coat protein 8897 7134922 AFE_0005 Acidithiobacillus ferrooxidans ATCC 23270 spore coat protein YP_002424520.1 8385 D 243159 CDS YP_002424521.1 218668121 7137108 8911..9654 1 NC_011761.1 identified by similarity to SP:P15319; pilus chaperone protein 9654 7137108 AFE_0006 Acidithiobacillus ferrooxidans ATCC 23270 pilus chaperone protein YP_002424521.1 8911 D 243159 CDS YP_002424522.1 218665167 7136858 9620..12064 1 NC_011761.1 identified by match to protein family HMM PF00577; outer membrane usher protein 12064 7136858 AFE_0007 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane usher protein YP_002424522.1 9620 D 243159 CDS YP_002424523.1 218667234 7134319 12061..12525 1 NC_011761.1 identified by similarity to SP:P27755; match to protein family HMM PF05229; spore coat protein 12525 7134319 AFE_0008 Acidithiobacillus ferrooxidans ATCC 23270 spore coat protein YP_002424523.1 12061 D 243159 CDS YP_002424524.1 218665509 7135031 complement(12684..13118) 1 NC_011761.1 identified by similarity to GB:AAP86126.1; hypothetical protein 13118 7135031 AFE_0010 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424524.1 12684 R 243159 CDS YP_002424525.1 218665207 7135880 complement(13451..13702) 1 NC_011761.1 identified by similarity to SP:P18198; match to protein family HMM PF03776; match to protein family HMM TIGR01215; cell division topological specificity factor MinE 13702 minE 7135880 minE Acidithiobacillus ferrooxidans ATCC 23270 cell division topological specificity factor MinE YP_002424525.1 13451 R 243159 CDS YP_002424526.1 218665026 7135695 complement(13704..14513) 1 NC_011761.1 identified by similarity to SP:P18197; match to protein family HMM PF01656; match to protein family HMM TIGR01968; septum site-determining protein MinD 14513 minD 7135695 minD Acidithiobacillus ferrooxidans ATCC 23270 septum site-determining protein MinD YP_002424526.1 13704 R 243159 CDS YP_002424527.1 218665635 7134954 complement(14532..15215) 1 NC_011761.1 identified by similarity to SP:P18196; match to protein family HMM PF03775; match to protein family HMM TIGR01222; septum site-determining protein MinC 15215 minC 7134954 minC Acidithiobacillus ferrooxidans ATCC 23270 septum site-determining protein MinC YP_002424527.1 14532 R 243159 CDS YP_002424528.1 218666462 7135579 complement(15294..15620) 1 NC_011761.1 identified by similarity to SP:P08811; match to protein family HMM PF00037; ferredoxin 15620 7135579 AFE_0014 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002424528.1 15294 R 243159 CDS YP_002424529.1 218667808 7134408 complement(15617..18172) 1 NC_011761.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I 18172 topA 7134408 topA Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase I YP_002424529.1 15617 R 243159 CDS YP_002424530.1 218665289 7134483 complement(18176..18616) 1 NC_011761.1 smg family protein 18616 7134483 AFE_0016 Acidithiobacillus ferrooxidans ATCC 23270 smg family protein YP_002424530.1 18176 R 243159 CDS YP_002424531.1 218666611 7136230 complement(18626..19723) 1 NC_011761.1 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA processing protein DprA 19723 7136230 AFE_0017 Acidithiobacillus ferrooxidans ATCC 23270 DNA processing protein DprA YP_002424531.1 18626 R 243159 CDS YP_002424532.1 218666415 7135342 complement(19720..20769) 1 NC_011761.1 identified by match to protein family HMM PF01476; LysM domain-containing protein 20769 7135342 AFE_0018 Acidithiobacillus ferrooxidans ATCC 23270 LysM domain-containing protein YP_002424532.1 19720 R 243159 CDS YP_002424533.1 218667290 7134361 20852..21355 1 NC_011761.1 identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079; polypeptide deformylase 21355 def-2 7134361 def-2 Acidithiobacillus ferrooxidans ATCC 23270 polypeptide deformylase YP_002424533.1 20852 D 243159 CDS YP_002424534.1 218665976 7135134 21348..22289 1 NC_011761.1 identified by similarity to SP:O85732; match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 22289 fmt 7135134 fmt Acidithiobacillus ferrooxidans ATCC 23270 methionyl-tRNA formyltransferase YP_002424534.1 21348 D 243159 CDS YP_002424535.1 218666805 7134190 22286..23590 1 NC_011761.1 identified by similarity to SP:P36929; match to protein family HMM PF01029; match to protein family HMM PF01189; match to protein family HMM TIGR00563; sun protein 23590 sun 7134190 sun Acidithiobacillus ferrooxidans ATCC 23270 sun protein YP_002424535.1 22286 D 243159 CDS YP_002424536.1 218667699 7137054 23581..24180 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 24180 7137054 AFE_0022 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424536.1 23581 D 243159 CDS YP_002424537.1 218668036 7135482 24231..26363 1 NC_011761.1 identified by similarity to SP:Q04850; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; nitrogen regulation protein NtrY 26363 ntrY 7135482 ntrY Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulation protein NtrY YP_002424537.1 24231 D 243159 CDS YP_002424538.1 218665148 7134801 26385..27791 1 NC_011761.1 identified by similarity to SP:Q04849; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF00165; match to protein family HMM PF02954; nitrogen assimilation regulatory protein NtrX 27791 ntrX 7134801 ntrX Acidithiobacillus ferrooxidans ATCC 23270 nitrogen assimilation regulatory protein NtrX YP_002424538.1 26385 D 243159 CDS YP_002424539.1 218665805 7134300 27788..27985 1 NC_011761.1 identified by similarity to PIR:AG2141; hypothetical protein 27985 7134300 AFE_0025 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424539.1 27788 D 243159 CDS YP_002424540.1 218666690 7135359 28118..29713 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 29713 7135359 AFE_0026 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002424540.1 28118 D 243159 CDS YP_002424541.1 218666460 7134561 29755..31122 1 NC_011761.1 identified by similarity to SP:Q06065; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator/response regulator 31122 7134561 AFE_0027 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator/response regulator YP_002424541.1 29755 D 243159 CDS YP_002424542.1 218667800 7134406 31545..33044 1 NC_011761.1 identified by similarity to GB:AAB93983.1; match to protein family HMM PF01011; tetrathionate hydrolase 33044 tetH 7134406 tetH Acidithiobacillus ferrooxidans ATCC 23270 tetrathionate hydrolase YP_002424542.1 31545 D 243159 CDS YP_002424543.1 218666136 7134475 complement(33018..33254) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 33254 7134475 AFE_0028 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424543.1 33018 R 243159 CDS YP_002424544.1 218665938 7134036 33338..34519 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 34519 7134036 AFE_0030 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424544.1 33338 D 243159 CDS YP_002424545.1 218667012 7134148 complement(34591..35946) 1 NC_011761.1 identified by similarity to SP:P25522; match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; match to protein family HMM TIGR00650; tRNA modification GTPase TrmE 35946 trmE 7134148 trmE Acidithiobacillus ferrooxidans ATCC 23270 tRNA modification GTPase TrmE YP_002424545.1 34591 R 243159 CDS YP_002424546.1 218665291 7134876 complement(35984..37570) 1 NC_011761.1 identified by match to protein family HMM PF02096; inner membrane protein 37570 7134876 AFE_0032 Acidithiobacillus ferrooxidans ATCC 23270 inner membrane protein YP_002424546.1 35984 R 243159 CDS YP_002424547.1 218666389 7136232 complement(37586..37801) 1 NC_011761.1 identified by similarity to SP:P22847; match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 37801 7136232 AFE_0033 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424547.1 37586 R 243159 CDS YP_002424548.1 218667338 7134333 complement(37798..38148) 1 NC_011761.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 38148 rnpA 7134333 rnpA Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease P protein component YP_002424548.1 37798 R 243159 CDS YP_002424549.1 218667468 7135183 complement(38153..38287) 1 NC_011761.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 38287 rpmH 7135183 rpmH Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L34 YP_002424549.1 38153 R 243159 CDS YP_002424550.1 218665463 7136760 complement(38358..40025) 1 NC_011761.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 40025 7136760 AFE_0036 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002424550.1 38358 R 243159 CDS YP_002424551.1 218665063 7135076 complement(40123..41025) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 41025 7135076 AFE_0037 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002424551.1 40123 R 243159 CDS YP_002424552.1 218665929 7134992 complement(41087..42199) 1 NC_011761.1 identified by match to protein family HMM PF00529; drug resistance secretion protein 42199 7134992 AFE_0038 Acidithiobacillus ferrooxidans ATCC 23270 drug resistance secretion protein YP_002424552.1 41087 R 243159 CDS YP_002424553.1 218665460 7134139 complement(42174..43628) 1 NC_011761.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, drug efflux transporter outer membrane lipoprotein 43628 7134139 AFE_0039 Acidithiobacillus ferrooxidans ATCC 23270 RND efflux system, drug efflux transporter outer membrane lipoprotein YP_002424553.1 42174 R 243159 CDS YP_002424554.1 218665640 7135072 complement(43609..45231) 1 NC_011761.1 identified by match to protein family HMM PF07690; EmrB/QacA family drug resistance transporter 45231 7135072 AFE_0040 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002424554.1 43609 R 243159 CDS YP_002424555.1 218667680 7137123 45787..46944 1 NC_011761.1 identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 46944 7137123 AFE_0041 Acidithiobacillus ferrooxidans ATCC 23270 C4-dicarboxylate transporter/malic acid transport protein YP_002424555.1 45787 D 243159 CDS YP_002424556.1 218665248 7135463 46984..47796 1 NC_011761.1 identified by match to protein family HMM TIGR01409; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 47796 7135463 AFE_0042 Acidithiobacillus ferrooxidans ATCC 23270 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_002424556.1 46984 D 243159 CDS YP_002424557.1 218667788 7135737 47821..48831 1 NC_011761.1 identified by similarity to SP:P27366; periplasmic solute-binding protein 48831 7135737 AFE_0043 Acidithiobacillus ferrooxidans ATCC 23270 periplasmic solute-binding protein YP_002424557.1 47821 D 243159 CDS YP_002424558.1 218667082 7134463 48896..49966 1 NC_011761.1 identified by match to protein family HMM PF07681; DoxD-like family protein 49966 doxD_2 7134463 doxD_2 Acidithiobacillus ferrooxidans ATCC 23270 DoxD-like family protein YP_002424558.1 48896 D 243159 CDS YP_002424559.1 218665316 7136682 50064..50711 1 NC_011761.1 identified by similarity to GB:CAC43401.1; sulfur/pyrite/thiosulfate/sulfide-induced protein 50711 7136682 AFE_0045 Acidithiobacillus ferrooxidans ATCC 23270 sulfur/pyrite/thiosulfate/sulfide-induced protein YP_002424559.1 50064 D 243159 CDS YP_002424560.1 218665311 7136257 50772..51173 1 NC_011761.1 identified by similarity to PIR:AB2294; hypothetical protein 51173 7136257 AFE_0046 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424560.1 50772 D 243159 CDS YP_002424561.1 218667437 7136252 complement(51204..51701) 1 NC_011761.1 identified by similarity to GB:BAC46291.1; match to protein family HMM PF00578; match to protein family HMM PF08534; hypothetical protein 51701 7136252 AFE_0047 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424561.1 51204 R 243159 CDS YP_002424562.1 218665682 7136727 complement(51795..52877) 1 NC_011761.1 identified by match to protein family HMM PF07681; DoxD-like family protein 52877 doxD_1 7136727 doxD_1 Acidithiobacillus ferrooxidans ATCC 23270 DoxD-like family protein YP_002424562.1 51795 R 243159 CDS YP_002424563.1 218665702 7137165 complement(52930..53943) 1 NC_011761.1 identified by similarity to SP:P27366; periplasmic solute-binding protein 53943 7137165 AFE_0049 Acidithiobacillus ferrooxidans ATCC 23270 periplasmic solute-binding protein YP_002424563.1 52930 R 243159 CDS YP_002424564.1 218666159 7137185 complement(53965..54777) 1 NC_011761.1 identified by match to protein family HMM TIGR01409; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 54777 7137185 AFE_0050 Acidithiobacillus ferrooxidans ATCC 23270 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_002424564.1 53965 R 243159 CDS YP_002424565.1 218666169 7134059 54776..55309 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 55309 7134059 AFE_0051 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424565.1 54776 D 243159 CDS YP_002424566.1 218667976 7134069 complement(55329..55991) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 55991 7134069 AFE_0052 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424566.1 55329 R 243159 CDS YP_002424567.1 218666833 7134740 complement(56115..57149) 1 NC_011761.1 identified by match to protein family HMM PF04143; hypothetical protein 57149 7134740 AFE_0053 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424567.1 56115 R 243159 CDS YP_002424568.1 218667981 7137082 complement(57310..57960) 1 NC_011761.1 identified by similarity to GB:BAC65273.1; match to protein family HMM PF01914; match to protein family HMM TIGR00427; MarC family integral membrane protein 57960 7137082 AFE_0054 Acidithiobacillus ferrooxidans ATCC 23270 MarC family integral membrane protein YP_002424568.1 57310 R 243159 CDS YP_002424569.1 218666395 7134745 58078..58335 1 NC_011761.1 identified by similarity to GB:AAM73313.1; match to protein family HMM TIGR02605; hypothetical protein 58335 7134745 AFE_0055 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424569.1 58078 D 243159 CDS YP_002424570.1 218666964 7134339 58419..60209 1 NC_011761.1 identified by similarity to SP:P21889; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartyl-tRNA synthetase 60209 aspS 7134339 aspS Acidithiobacillus ferrooxidans ATCC 23270 aspartyl-tRNA synthetase YP_002424570.1 58419 D 243159 CDS YP_002424571.1 218665171 7134827 60310..61392 1 NC_011761.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 61392 nadA 7134827 nadA Acidithiobacillus ferrooxidans ATCC 23270 quinolinate synthetase YP_002424571.1 60310 D 243159 CDS YP_002424572.1 218667202 7134323 61401..62012 1 NC_011761.1 identified by match to protein family HMM PF01553; acyltransferase family protein 62012 7134323 AFE_0058 Acidithiobacillus ferrooxidans ATCC 23270 acyltransferase family protein YP_002424572.1 61401 D 243159 CDS YP_002424573.1 218666356 7135596 62092..62844 1 NC_011761.1 identified by similarity to SP:Q8EEF0; match to protein family HMM PF01709; match to protein family HMM TIGR01033; hypothetical protein 62844 7135596 AFE_0059 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424573.1 62092 D 243159 CDS YP_002424574.1 218666715 7136495 62927..63427 1 NC_011761.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 63427 ruvC 7136495 ruvC Acidithiobacillus ferrooxidans ATCC 23270 Holliday junction resolvase YP_002424574.1 62927 D 243159 CDS YP_002424575.1 218665092 7137210 63456..64037 1 NC_011761.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 64037 ruvA 7137210 ruvA Acidithiobacillus ferrooxidans ATCC 23270 Holliday junction DNA helicase RuvA YP_002424575.1 63456 D 243159 CDS YP_002424576.1 218666868 7135023 64080..65102 1 NC_011761.1 identified by similarity to SP:Q51426; match to protein family HMM PF00004; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 65102 ruvB 7135023 ruvB Acidithiobacillus ferrooxidans ATCC 23270 Holliday junction DNA helicase RuvB YP_002424576.1 64080 D 243159 CDS YP_002424577.1 218665935 7137117 65092..65514 1 NC_011761.1 identified by match to protein family HMM PF03061; match to protein family HMM TIGR00051; match to protein family HMM TIGR02799; tol-pal system-associated acyl-CoA thioesterase 65514 ybgC 7137117 ybgC Acidithiobacillus ferrooxidans ATCC 23270 tol-pal system-associated acyl-CoA thioesterase YP_002424577.1 65092 D 243159 CDS YP_002424578.1 218666774 7134145 65521..66222 1 NC_011761.1 identified by similarity to SP:P05828; match to protein family HMM PF01618; match to protein family HMM TIGR02796; TolQ protein 66222 tolQ 7134145 tolQ Acidithiobacillus ferrooxidans ATCC 23270 TolQ protein YP_002424578.1 65521 D 243159 CDS YP_002424579.1 218666354 7137270 66219..66629 1 NC_011761.1 identified by similarity to SP:P05829; match to protein family HMM PF02472; match to protein family HMM TIGR02801; TolR protein 66629 tolR 7137270 tolR Acidithiobacillus ferrooxidans ATCC 23270 TolR protein YP_002424579.1 66219 D 243159 CDS YP_002424580.1 218665424 7136493 66626..67579 1 NC_011761.1 identified by similarity to GB:CAB50780.1; match to protein family HMM TIGR01352; match to protein family HMM TIGR02794; TolA protein 67579 tolA 7136493 tolA Acidithiobacillus ferrooxidans ATCC 23270 TolA protein YP_002424580.1 66626 D 243159 CDS YP_002424581.1 218665098 7135036 67572..68840 1 NC_011761.1 identified by similarity to SP:P19935; match to protein family HMM PF04052; match to protein family HMM PF07676; match to protein family HMM TIGR02800; tol-pal system beta propeller repeat protein TolB 68840 tolB 7135036 tolB Acidithiobacillus ferrooxidans ATCC 23270 tol-pal system beta propeller repeat protein TolB YP_002424581.1 67572 D 243159 CDS YP_002424582.1 218665551 7134249 complement(68882..69571) 1 NC_011761.1 identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; exsB protein 69571 7134249 AFE_0068 Acidithiobacillus ferrooxidans ATCC 23270 exsB protein YP_002424582.1 68882 R 243159 CDS YP_002424583.1 218667706 7135923 complement(69574..70218) 1 NC_011761.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 70218 7135923 AFE_0069 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002424583.1 69574 R 243159 CDS YP_002424584.1 218666817 7135489 complement(70218..71036) 1 NC_011761.1 identified by similarity to GB:AAM86603.1; match to protein family HMM PF00515; match to protein family HMM TIGR02795; hypothetical protein 71036 7135489 AFE_0070 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424584.1 70218 R 243159 CDS YP_002424585.1 218667535 7137066 complement(71057..71635) 1 NC_011761.1 identified by similarity to SP:P07176; match to protein family HMM PF00691; match to protein family HMM TIGR02802; peptidoglycan-associated lipoprotein 71635 7137066 AFE_0071 Acidithiobacillus ferrooxidans ATCC 23270 peptidoglycan-associated lipoprotein YP_002424585.1 71057 R 243159 CDS YP_002424586.1 218666588 7136401 71970..72170 1 NC_011761.1 identified by similarity to PIR:S76075; hypothetical protein 72170 7136401 AFE_0072 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424586.1 71970 D 243159 CDS YP_002424587.1 218667732 7135318 complement(72256..73722) 1 NC_011761.1 identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025; undecaprenyl-phosphate galactosephosphotransferase 73722 7135318 AFE_0073 Acidithiobacillus ferrooxidans ATCC 23270 undecaprenyl-phosphate galactosephosphotransferase YP_002424587.1 72256 R 243159 CDS YP_002424588.1 218666600 7135515 73707..74717 1 NC_011761.1 identified by match to protein family HMM PF02706; chain length determinant family protein 74717 7135515 AFE_0074 Acidithiobacillus ferrooxidans ATCC 23270 chain length determinant family protein YP_002424588.1 73707 D 243159 CDS YP_002424589.1 218665613 7135330 74805..75164 1 NC_011761.1 identified by similarity to GB:AAN48775.1; match to protein family HMM PF01047; hypothetical protein 75164 7135330 AFE_0075 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424589.1 74805 D 243159 CDS YP_002424590.1 218667791 7135556 75356..76855 1 NC_011761.1 identified by similarity to SP:P37781; match to protein family HMM PF01943; polysaccharide biosynthesis protein 76855 7135556 AFE_0076 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide biosynthesis protein YP_002424590.1 75356 D 243159 CDS YP_002424591.1 218665881 7134466 76845..77906 1 NC_011761.1 identified by similarity to GB:AAN49860.1; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 77906 7134466 AFE_0077 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424591.1 76845 D 243159 CDS YP_002424592.1 218665416 7135436 77969..78952 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 78952 7135436 AFE_0078 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002424592.1 77969 D 243159 CDS YP_002424593.1 218666725 7136198 78949..80160 1 NC_011761.1 identified by similarity to PIR:E96008; match to protein family HMM PF00534; glycosyltransferase 80160 7136198 AFE_0079 Acidithiobacillus ferrooxidans ATCC 23270 glycosyltransferase YP_002424593.1 78949 D 243159 CDS YP_002424594.1 218666904 7137220 80176..81456 1 NC_011761.1 hypothetical protein 81456 7137220 AFE_0080 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424594.1 80176 D 243159 CDS YP_002424595.1 218667850 7134614 81463..82503 1 NC_011761.1 identified by similarity to GB:AAF04384.1; match to protein family HMM PF00534; mannosyltransferase 82503 mtfA 7134614 mtfA Acidithiobacillus ferrooxidans ATCC 23270 mannosyltransferase YP_002424595.1 81463 D 243159 CDS YP_002424596.1 218665154 7134928 82571..83497 1 NC_011761.1 identified by similarity to SP:P26403; match to protein family HMM PF00535; O antigen biosynthesis rhamnosyltransferase 83497 7134928 AFE_0082 Acidithiobacillus ferrooxidans ATCC 23270 O antigen biosynthesis rhamnosyltransferase YP_002424596.1 82571 D 243159 CDS YP_002424597.1 218668122 7135847 84598..84819 1 NC_011761.1 prevent-host-death family protein 84819 7135847 AFE_0085 Acidithiobacillus ferrooxidans ATCC 23270 prevent-host-death family protein YP_002424597.1 84598 D 243159 CDS YP_002424598.1 218666107 7136859 84819..85232 1 NC_011761.1 identified by similarity to PIR:B70949; hypothetical protein 85232 7136859 AFE_0086 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424598.1 84819 D 243159 CDS YP_002424599.1 218665394 7137028 85229..85519 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 85519 7137028 AFE_0087 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424599.1 85229 D 243159 CDS YP_002424600.1 218665352 7136176 85685..85960 1 NC_011761.1 identified by match to protein family HMM PF05015; plasmid maintenance system killer protein 85960 7136176 AFE_0088 Acidithiobacillus ferrooxidans ATCC 23270 plasmid maintenance system killer protein YP_002424600.1 85685 D 243159 CDS YP_002424601.1 218666717 7136133 85976..86293 1 NC_011761.1 identified by match to protein family HMM TIGR02607; DNA-binding protein 86293 7136133 AFE_0089 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein YP_002424601.1 85976 D 243159 CDS YP_002424602.1 218667877 7137212 86308..86487 1 NC_011761.1 identified by similarity to GB:AAN33038.1; hypothetical protein 86487 7137212 AFE_0090 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424602.1 86308 D 243159 CDS YP_002424603.1 218665364 7136536 complement(86624..86884) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 86884 7136536 AFE_0091 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424603.1 86624 R 243159 CDS YP_002424604.1 218667365 7136146 86994..88070 1 NC_011761.1 identified by match to protein family HMM PF02661; fic family protein 88070 7136146 AFE_0092 Acidithiobacillus ferrooxidans ATCC 23270 fic family protein YP_002424604.1 86994 D 243159 CDS YP_002424605.1 218667525 7137035 complement(88630..88938) 1 NC_011761.1 identified by match to protein family HMM TIGR01552; prevent-host-death family protein 88938 7137035 AFE_0094 Acidithiobacillus ferrooxidans ATCC 23270 prevent-host-death family protein YP_002424605.1 88630 R 243159 CDS YP_002424606.1 218665426 7136391 complement(88956..89129) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 89129 7136391 AFE_0095 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424606.1 88956 R 243159 CDS YP_002424607.1 218666317 7135038 complement(89240..89668) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 89668 7135038 AFE_0096 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424607.1 89240 R 243159 CDS YP_002424608.1 218665479 7136456 complement(89671..90102) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 90102 7136456 AFE_0097 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424608.1 89671 R 243159 CDS YP_002424609.1 218668141 7135092 complement(90248..92506) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07681; match to protein family HMM PF07992; DoxD family protein/pyridine nucleotide-disulfide oxidoreductase 92506 7135092 AFE_0098 Acidithiobacillus ferrooxidans ATCC 23270 DoxD family protein/pyridine nucleotide-disulfide oxidoreductase YP_002424609.1 90248 R 243159 CDS YP_002424610.1 218667250 7135960 92626..93072 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 93072 7135960 AFE_0099 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424610.1 92626 D 243159 CDS YP_002424611.1 218665946 7135644 complement(93079..94164) 1 NC_011761.1 identified by similarity to GB:AAM71795.1; match to protein family HMM PF00529; hypothetical protein 94164 7135644 AFE_0100 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424611.1 93079 R 243159 CDS YP_002424612.1 218667721 7134156 complement(94154..94846) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 94846 7134156 AFE_0101 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002424612.1 94154 R 243159 CDS YP_002424613.1 218666754 7135504 complement(94848..95984) 1 NC_011761.1 identified by match to protein family HMM PF02687; ABC transporter permease 95984 7135504 AFE_0102 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002424613.1 94848 R 243159 CDS YP_002424614.1 218665872 7137249 complement(95981..96208) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 96208 7137249 AFE_0103 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424614.1 95981 R 243159 CDS YP_002424615.1 218666855 7135427 96317..96553 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 96553 7135427 AFE_0104 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424615.1 96317 D 243159 CDS YP_002424616.1 218665730 7137104 complement(96590..97855) 1 NC_011761.1 identified by match to protein family HMM PF01566; metal ion transporter NRAMP family 97855 7137104 AFE_0105 Acidithiobacillus ferrooxidans ATCC 23270 metal ion transporter NRAMP family YP_002424616.1 96590 R 243159 CDS YP_002424617.1 218666435 7136045 complement(97942..99282) 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 99282 7136045 AFE_0106 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002424617.1 97942 R 243159 CDS YP_002424618.1 218665330 7134381 complement(99246..99956) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 99956 7134381 AFE_0107 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002424618.1 99246 R 243159 CDS YP_002424619.1 218666470 7136271 100177..101736 1 NC_011761.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; NodT family RND efflux system outer membrane lipoprotein 101736 7136271 AFE_0108 Acidithiobacillus ferrooxidans ATCC 23270 NodT family RND efflux system outer membrane lipoprotein YP_002424619.1 100177 D 243159 CDS YP_002424620.1 218667857 7136280 101733..102815 1 NC_011761.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 102815 7136280 AFE_0109 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002424620.1 101733 D 243159 CDS YP_002424621.1 218665749 7134177 105998..106156 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 106156 7134177 AFE_0111 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424621.1 105998 D 243159 CDS YP_002424622.1 218665086 7136064 106392..106949 1 NC_011761.1 identified by similarity to GB:BAC61454.1; match to protein family HMM PF06041; hypothetical protein 106949 7136064 AFE_0112 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424622.1 106392 D 243159 CDS YP_002424623.1 218666845 7135016 107062..107265 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 107265 7135016 AFE_0113 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424623.1 107062 D 243159 CDS YP_002424624.1 218667717 7137094 107262..108281 1 NC_011761.1 identified by similarity to SP:P23872; match to protein family HMM PF07859; lipase/esterase 108281 7137094 AFE_0114 Acidithiobacillus ferrooxidans ATCC 23270 lipase/esterase YP_002424624.1 107262 D 243159 CDS YP_002424625.1 218665485 7135500 108301..109737 1 NC_011761.1 identified by match to protein family HMM PF03724; hypothetical protein 109737 7135500 AFE_0115 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424625.1 108301 D 243159 CDS YP_002424626.1 218666888 7135098 complement(110119..110220) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 110220 7135098 AFE_0116 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424626.1 110119 R 243159 CDS YP_002424627.1 218667000 7134598 110500..111384 1 NC_011761.1 identified by similarity to SP:P77234; match to protein family HMM PF08238; hypothetical protein 111384 7134598 AFE_0117 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424627.1 110500 D 243159 CDS YP_002424628.1 218665604 7134863 complement(111474..111686) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 111686 7134863 AFE_0118 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424628.1 111474 R 243159 CDS YP_002424629.1 218667288 7135547 111694..112356 1 NC_011761.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; CarD family transcriptional regulator 112356 7135547 AFE_0119 Acidithiobacillus ferrooxidans ATCC 23270 CarD family transcriptional regulator YP_002424629.1 111694 D 243159 CDS YP_002424630.1 218665812 7135132 112446..112652 1 NC_011761.1 identified by similarity to GB:AAP77746.1; hypothetical protein 112652 7135132 AFE_0120 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424630.1 112446 D 243159 CDS YP_002424631.1 218665189 7135366 complement(112734..112865) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 112865 7135366 AFE_0121 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424631.1 112734 R 243159 CDS YP_002424632.1 218667596 7135675 112952..113305 1 NC_011761.1 hypothetical protein 113305 7135675 AFE_0122 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424632.1 112952 D 243159 CDS YP_002424633.1 218666167 7135769 113298..114305 1 NC_011761.1 identified by similarity to SP:P36175; match to protein family HMM PF00814; match to protein family HMM TIGR00329; O-sialoglycoprotein endopeptidase 114305 gcp 7135769 gcp Acidithiobacillus ferrooxidans ATCC 23270 O-sialoglycoprotein endopeptidase YP_002424633.1 113298 D 243159 CDS YP_002424634.1 218667773 7134067 114305..114832 1 NC_011761.1 identified by match to protein family HMM PF00515; hypothetical protein 114832 7134067 AFE_0124 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424634.1 114305 D 243159 CDS YP_002424635.1 218666429 7134448 complement(114839..115435) 1 NC_011761.1 identified by similarity to GB:CAE33513.1; match to protein family HMM PF02660; match to protein family HMM TIGR00023; hypothetical protein 115435 7134448 AFE_0125 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424635.1 114839 R 243159 CDS YP_002424636.1 218666398 7134375 115508..115867 1 NC_011761.1 identified by similarity to SP:P31055; match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase 115867 folB 7134375 folB Acidithiobacillus ferrooxidans ATCC 23270 dihydroneopterin aldolase YP_002424636.1 115508 D 243159 CDS YP_002424637.1 218666627 7134342 complement(115885..117225) 1 NC_011761.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; 30S ribosomal protein S12 methylthiotransferase 117225 rimO 7134342 rimO Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S12 methylthiotransferase YP_002424637.1 115885 R 243159 CDS YP_002424638.1 218667291 7134498 complement(117222..117614) 1 NC_011761.1 identified by match to protein family HMM PF01106; NifU domain-containing protein 117614 7134498 AFE_0128 Acidithiobacillus ferrooxidans ATCC 23270 NifU domain-containing protein YP_002424638.1 117222 R 243159 CDS YP_002424639.1 218667935 7135135 complement(117611..118351) 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short-chain dehydrogenase 118351 7135135 AFE_0129 Acidithiobacillus ferrooxidans ATCC 23270 short-chain dehydrogenase YP_002424639.1 117611 R 243159 CDS YP_002424640.1 218665478 7135242 118133..119488 1 NC_011761.1 identified by similarity to GB:AAM35577.1; match to protein family HMM PF02636; hypothetical protein 119488 7135242 AFE_0130 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424640.1 118133 D 243159 CDS YP_002424641.1 218666559 7135091 complement(119591..120526) 1 NC_011761.1 hypothetical protein 120526 7135091 AFE_0131 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424641.1 119591 R 243159 CDS YP_002424642.1 218665193 7135289 120599..120724 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 120724 7135289 AFE_0133 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424642.1 120599 D 243159 CDS YP_002424643.1 218667444 7135679 complement(120643..120870) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 120870 7135679 AFE_0132 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424643.1 120643 R 243159 CDS YP_002424644.1 218665989 7136734 complement(121003..122394) 1 NC_011761.1 identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; oxygen-independent coproporphyrinogen III oxidase 122394 hemN 7136734 hemN Acidithiobacillus ferrooxidans ATCC 23270 oxygen-independent coproporphyrinogen III oxidase YP_002424644.1 121003 R 243159 CDS YP_002424645.1 218666273 7134203 complement(122432..123364) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 123364 7134203 AFE_0135 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002424645.1 122432 R 243159 CDS YP_002424646.1 218665284 7136630 complement(123387..123512) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 123512 7136630 AFE_0136 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424646.1 123387 R 243159 CDS YP_002424647.1 218667524 7136225 123600..124943 1 NC_011761.1 identified by similarity to PIR:D83343; hypothetical protein 124943 7136225 AFE_0137 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424647.1 123600 D 243159 CDS YP_002424648.1 218666661 7136390 complement(125017..126126) 1 NC_011761.1 identified by similarity to GB:AAL23754.1; match to protein family HMM PF01075; match to protein family HMM TIGR02195; LPS heptosyltransferase II 126126 7136390 AFE_0138 Acidithiobacillus ferrooxidans ATCC 23270 LPS heptosyltransferase II YP_002424648.1 125017 R 243159 CDS YP_002424649.1 218666351 7134532 complement(126149..126913) 1 NC_011761.1 identified by similarity to PIR:A81668; hypothetical protein 126913 7134532 AFE_0139 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424649.1 126149 R 243159 CDS YP_002424650.1 218667238 7136490 complement(126917..128302) 1 NC_011761.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; oxidase, FAD-binding 128302 7136490 AFE_0140 Acidithiobacillus ferrooxidans ATCC 23270 oxidase, FAD-binding YP_002424650.1 126917 R 243159 CDS YP_002424651.1 218665648 7135632 complement(128299..129375) 1 NC_011761.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00441; match to protein family HMM TIGR02199; phosphoheptose isomerase 129375 7135632 AFE_0141 Acidithiobacillus ferrooxidans ATCC 23270 phosphoheptose isomerase YP_002424651.1 128299 R 243159 CDS YP_002424652.1 218667566 7137131 complement(129372..129737) 1 NC_011761.1 identified by match to protein family HMM PF02021; match to protein family HMM TIGR00252; hypothetical protein 129737 7137131 AFE_0142 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424652.1 129372 R 243159 CDS YP_002424653.1 218666270 7136432 complement(129741..131579) 1 NC_011761.1 lipoprotein 131579 7136432 AFE_0143 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002424653.1 129741 R 243159 CDS YP_002424654.1 218665567 7136627 131649..132524 1 NC_011761.1 identified by similarity to GB:AAN66950.1; match to protein family HMM PF00590; match to protein family HMM TIGR00096; tetrapyrrole methylase family protein 132524 7136627 AFE_0144 Acidithiobacillus ferrooxidans ATCC 23270 tetrapyrrole methylase family protein YP_002424654.1 131649 D 243159 CDS YP_002424655.1 218668156 7136002 132816..132965 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 132965 7136002 AFE_0146 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424655.1 132816 D 243159 CDS YP_002424656.1 218665137 7135975 complement(133054..133299) 1 NC_011761.1 identified by similarity to GB:AAQ58419.1; hypothetical protein 133299 7135975 AFE_0147 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424656.1 133054 R 243159 CDS YP_002424657.1 218666262 7134288 133298..133624 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 133624 7134288 AFE_0149 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424657.1 133298 D 243159 CDS YP_002424658.1 218666948 7136619 complement(133571..134074) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 134074 7136619 AFE_0148 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424658.1 133571 R 243159 CDS YP_002424659.1 218666197 7134658 complement(134110..134904) 1 NC_011761.1 identified by similarity to GB:CAE33855.1; hypothetical protein 134904 7134658 AFE_0150 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424659.1 134110 R 243159 CDS YP_002424660.1 218665323 7136553 complement(135019..135417) 1 NC_011761.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 135417 7136553 AFE_0151 Acidithiobacillus ferrooxidans ATCC 23270 rhodanese-like domain-containing protein YP_002424660.1 135019 R 243159 CDS YP_002424661.1 218666864 7136264 complement(135448..135831) 1 NC_011761.1 identified by similarity to PIR:D84128; match to protein family HMM PF04241; hypothetical protein 135831 7136264 AFE_0152 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424661.1 135448 R 243159 CDS YP_002424662.1 218667739 7137113 136020..136712 1 NC_011761.1 identified by match to protein family HMM PF01988; integral membrane protein 136712 7137113 AFE_0153 Acidithiobacillus ferrooxidans ATCC 23270 integral membrane protein YP_002424662.1 136020 D 243159 CDS YP_002424663.1 218665981 7135194 136964..137620 1 NC_011761.1 identified by match to protein family HMM PF00230; MIP family channel protein 137620 7135194 AFE_0154 Acidithiobacillus ferrooxidans ATCC 23270 MIP family channel protein YP_002424663.1 136964 D 243159 CDS YP_002424664.1 218667440 7134195 137788..138393 1 NC_011761.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 138393 7134195 AFE_0155 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglycerate mutase family protein YP_002424664.1 137788 D 243159 CDS YP_002424665.1 218666749 7136730 complement(138424..139374) 1 NC_011761.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 139374 speE 7136730 speE Acidithiobacillus ferrooxidans ATCC 23270 spermidine synthase YP_002424665.1 138424 R 243159 CDS YP_002424666.1 218666319 7137244 complement(139376..139777) 1 NC_011761.1 identified by similarity to SP:O34426; match to protein family HMM PF02675; s-adenosylmethionine decarboxylase proenzyme 139777 7137244 AFE_0157 Acidithiobacillus ferrooxidans ATCC 23270 s-adenosylmethionine decarboxylase proenzyme YP_002424666.1 139376 R 243159 CDS YP_002424667.1 218668048 7136458 140091..140921 1 NC_011761.1 identified by similarity to GB:AAD17957.1; match to protein family HMM PF00005; toluene ABC transporter ATP-binding protein 140921 7136458 AFE_0158 Acidithiobacillus ferrooxidans ATCC 23270 toluene ABC transporter ATP-binding protein YP_002424667.1 140091 D 243159 CDS YP_002424668.1 218667295 7134813 140924..141706 1 NC_011761.1 identified by similarity to GB:AAD17958.1; match to protein family HMM PF02405; match to protein family HMM TIGR00056; toluene tolerance protein Ttg2B 141706 7134813 AFE_0159 Acidithiobacillus ferrooxidans ATCC 23270 toluene tolerance protein Ttg2B YP_002424668.1 140924 D 243159 CDS YP_002424669.1 218665055 7135139 141721..142179 1 NC_011761.1 identified by match to protein family HMM PF02470; mce-like protein 142179 7135139 AFE_0160 Acidithiobacillus ferrooxidans ATCC 23270 mce-like protein YP_002424669.1 141721 D 243159 CDS YP_002424670.1 218665043 7134984 142196..142834 1 NC_011761.1 identified by match to protein family HMM PF05494; toluene tolerance protein 142834 7134984 AFE_0161 Acidithiobacillus ferrooxidans ATCC 23270 toluene tolerance protein YP_002424670.1 142196 D 243159 CDS YP_002424671.1 218666943 7134972 142906..143148 1 NC_011761.1 identified by similarity to GB:CAD16664.1; hypothetical protein 143148 7134972 AFE_0162 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424671.1 142906 D 243159 CDS YP_002424672.1 218667475 7134653 143141..144061 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 144061 7134653 AFE_0163 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002424672.1 143141 D 243159 CDS YP_002424673.1 218665059 7136767 144064..144327 1 NC_011761.1 identified by match to protein family HMM PF01479; S4 domain-containing protein 144327 7136767 AFE_0164 Acidithiobacillus ferrooxidans ATCC 23270 S4 domain-containing protein YP_002424673.1 144064 D 243159 CDS YP_002424674.1 218667827 7134988 144324..145325 1 NC_011761.1 identified by similarity to SP:P19624; match to protein family HMM PF04166; match to protein family HMM TIGR00557; 4-hydroxythreonine-4-phosphate dehydrogenase 145325 pdxA 7134988 pdxA Acidithiobacillus ferrooxidans ATCC 23270 4-hydroxythreonine-4-phosphate dehydrogenase YP_002424674.1 144324 D 243159 CDS YP_002424675.1 218666495 7134905 complement(145352..145906) 1 NC_011761.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 145906 7134905 AFE_0166 Acidithiobacillus ferrooxidans ATCC 23270 HNH endonuclease domain-containing protein YP_002424675.1 145352 R 243159 CDS YP_002424676.1 218666666 7136306 145972..146775 1 NC_011761.1 identified by similarity to SP:P06992; match to protein family HMM PF00398; match to protein family HMM TIGR00755; dimethyladenosine transferase 146775 ksgA 7136306 ksgA Acidithiobacillus ferrooxidans ATCC 23270 dimethyladenosine transferase YP_002424676.1 145972 D 243159 CDS YP_002424677.1 218666836 7134537 146772..147239 1 NC_011761.1 identified by similarity to GB:CAD74705.1; hypothetical protein 147239 7134537 AFE_0169 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424677.1 146772 D 243159 CDS YP_002424678.1 218667774 7137085 complement(147205..148095) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 148095 7137085 AFE_0168 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424678.1 147205 R 243159 CDS YP_002424679.1 218665719 7134449 complement(148046..149785) 1 NC_011761.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 149785 argS 7134449 argS Acidithiobacillus ferrooxidans ATCC 23270 arginyl-tRNA synthetase YP_002424679.1 148046 R 243159 CDS YP_002424680.1 218666720 7137202 complement(149925..151529) 1 NC_011761.1 identified by match to protein family HMM PF07690; EmrB/QacA subfamily drug resistance transporter 151529 7137202 AFE_0171 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA subfamily drug resistance transporter YP_002424680.1 149925 R 243159 CDS YP_002424681.1 218666386 7137215 151578..152471 1 NC_011761.1 identified by similarity to SP:P25544; match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 152471 7137215 AFE_0172 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002424681.1 151578 D 243159 CDS YP_002424682.1 218665801 7136526 complement(152487..153398) 1 NC_011761.1 identified by match to protein family HMM PF05175; match to protein family HMM PF08242; match to protein family HMM TIGR00536; match to protein family HMM TIGR03533; ribosomal protein L3 N-methyltransferase 153398 prmB 7136526 prmB Acidithiobacillus ferrooxidans ATCC 23270 ribosomal protein L3 N-methyltransferase YP_002424682.1 152487 R 243159 CDS YP_002424683.1 218665721 7136116 complement(153399..154160) 1 NC_011761.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 154160 xth-2 7136116 xth-2 Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease III YP_002424683.1 153399 R 243159 CDS YP_002424684.1 218667805 7136036 complement(154173..154481) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 154481 7136036 AFE_0175 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424684.1 154173 R 243159 CDS YP_002424685.1 218666405 7134480 complement(154478..155335) 1 NC_011761.1 identified by similarity to PIR:C83019; match to protein family HMM PF04378; hypothetical protein 155335 7134480 AFE_0176 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424685.1 154478 R 243159 CDS YP_002424686.1 218666033 7134349 155427..156029 1 NC_011761.1 identified by similarity to GB:AAQ60970.1; match to protein family HMM PF02798; glutathione S-transferase family protein 156029 7134349 AFE_0177 Acidithiobacillus ferrooxidans ATCC 23270 glutathione S-transferase family protein YP_002424686.1 155427 D 243159 CDS YP_002424687.1 218667378 7136953 156035..156808 1 NC_011761.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 156808 xth-1 7136953 xth-1 Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease III YP_002424687.1 156035 D 243159 CDS YP_002424688.1 218667804 7136900 156805..157818 1 NC_011761.1 identified by similarity to SP:P23871; match to protein family HMM PF00762; match to protein family HMM TIGR00109; ferrochelatase 157818 hemH 7136900 hemH Acidithiobacillus ferrooxidans ATCC 23270 ferrochelatase YP_002424688.1 156805 D 243159 CDS YP_002424689.1 218667241 7134479 157886..158374 1 NC_011761.1 identified by similarity to SP:P30856; match to protein family HMM PF00254; FKBP-type peptidyl-prolyl cis-trans isomerase 158374 7134479 AFE_0180 Acidithiobacillus ferrooxidans ATCC 23270 FKBP-type peptidyl-prolyl cis-trans isomerase YP_002424689.1 157886 D 243159 CDS YP_002424690.1 218666067 7135635 158423..159604 1 NC_011761.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 159604 anmK 7135635 anmK Acidithiobacillus ferrooxidans ATCC 23270 anhydro-N-acetylmuramic acid kinase YP_002424690.1 158423 D 243159 CDS YP_002424691.1 218665149 7136987 159585..160481 1 NC_011761.1 identified by similarity to SP:P54374; match to protein family HMM PF01488; match to protein family HMM PF08501; match to protein family HMM TIGR00507; shikimate 5-dehydrogenase 160481 aroE 7136987 aroE Acidithiobacillus ferrooxidans ATCC 23270 shikimate 5-dehydrogenase YP_002424691.1 159585 D 243159 CDS YP_002424692.1 218668163 7134301 160451..162160 1 NC_011761.1 identified by similarity to SP:P45792; match to protein family HMM PF00437; match to protein family HMM PF05157; match to protein family HMM TIGR02538; type IV pilus assembly protein 162160 7134301 AFE_0183 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus assembly protein YP_002424692.1 160451 D 243159 CDS YP_002424693.1 218665404 7135982 162300..163892 1 NC_011761.1 identified by similarity to SP:P33639; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor protein PilS 163892 7135982 AFE_0184 Acidithiobacillus ferrooxidans ATCC 23270 sensor protein PilS YP_002424693.1 162300 D 243159 CDS YP_002424694.1 218667563 7136186 163903..165240 1 NC_011761.1 identified by similarity to SP:Q00934; match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; type IV fimbriae expression regulatory protein PilR 165240 7136186 AFE_0185 Acidithiobacillus ferrooxidans ATCC 23270 type IV fimbriae expression regulatory protein PilR YP_002424694.1 163903 D 243159 CDS YP_002424695.1 218665857 7136429 165237..166037 1 NC_011761.1 identified by similarity to SP:P22610; match to protein family HMM PF01478; match to protein family HMM PF06750; type IV pilus prepilin peptidase PilD 166037 pilD 7136429 pilD Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus prepilin peptidase PilD YP_002424695.1 165237 D 243159 CDS YP_002424696.1 218665649 7135412 166038..166652 1 NC_011761.1 identified by similarity to SP:P36679; match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 166652 coaE 7135412 coaE Acidithiobacillus ferrooxidans ATCC 23270 dephospho-CoA kinase YP_002424696.1 166038 D 243159 CDS YP_002424697.1 218665572 7137132 166771..167523 1 NC_011761.1 identified by similarity to GB:AAO89714.1; hypothetical protein 167523 7137132 AFE_0188 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424697.1 166771 D 243159 CDS YP_002424698.1 218667372 7135944 167554..168573 1 NC_011761.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 168573 fbp 7135944 fbp Acidithiobacillus ferrooxidans ATCC 23270 fructose-1,6-bisphosphatase YP_002424698.1 167554 D 243159 CDS YP_002424699.1 218665750 7136894 168768..169193 1 NC_011761.1 identified by similarity to SP:P25663; match to protein family HMM PF04386; stringent starvation protein B 169193 sspB 7136894 sspB Acidithiobacillus ferrooxidans ATCC 23270 stringent starvation protein B YP_002424699.1 168768 D 243159 CDS YP_002424700.1 218666269 7136065 169190..169855 1 NC_011761.1 identified by match to protein family HMM PF01464; transglycosylase 169855 7136065 AFE_0192 Acidithiobacillus ferrooxidans ATCC 23270 transglycosylase YP_002424700.1 169190 D 243159 CDS YP_002424701.1 218665368 7136626 complement(169837..170079) 1 NC_011761.1 identified by match to protein family HMM PF02954; Fis family transcriptional regulator 170079 7136626 AFE_0191 Acidithiobacillus ferrooxidans ATCC 23270 Fis family transcriptional regulator YP_002424701.1 169837 R 243159 CDS YP_002424702.1 218666000 7136150 complement(170091..170723) 1 NC_011761.1 identified by match to protein family HMM TIGR02098; MJ0042 family finger-like domain-containing protein 170723 7136150 AFE_0193 Acidithiobacillus ferrooxidans ATCC 23270 MJ0042 family finger-like domain-containing protein YP_002424702.1 170091 R 243159 CDS YP_002424703.1 218665803 7134215 complement(170726..171604) 1 NC_011761.1 identified by similarity to SP:P28637; match to protein family HMM PF06325; match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase 171604 prmA 7134215 prmA Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L11 methyltransferase YP_002424703.1 170726 R 243159 CDS YP_002424704.1 218667890 7135356 complement(171601..172947) 1 NC_011761.1 identified by similarity to SP:P37798; match to protein family HMM PF00289; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; match to protein family HMM TIGR00514; acetyl-CoA carboxylase, biotin carboxylase 172947 accC 7135356 accC Acidithiobacillus ferrooxidans ATCC 23270 acetyl-CoA carboxylase, biotin carboxylase YP_002424704.1 171601 R 243159 CDS YP_002424705.1 218665066 7135196 complement(172949..173419) 1 NC_011761.1 identified by similarity to SP:P37799; match to protein family HMM PF00364; match to protein family HMM TIGR00531; acetyl-CoA carboxylase, biotin carboxyl carrier protein 173419 accB 7135196 accB Acidithiobacillus ferrooxidans ATCC 23270 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002424705.1 172949 R 243159 CDS YP_002424706.1 218666812 7134995 complement(173439..173900) 1 NC_011761.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 173900 aroQ 7134995 aroQ Acidithiobacillus ferrooxidans ATCC 23270 3-dehydroquinate dehydratase YP_002424706.1 173439 R 243159 CDS YP_002424707.1 218665793 7137061 complement(174068..174445) 1 NC_011761.1 identified by match to protein family HMM PF01638; transcriptional regulator 174445 7137061 AFE_0198 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002424707.1 174068 R 243159 CDS YP_002424708.1 218667479 7136108 174782..175639 1 NC_011761.1 identified by similarity to GB:CAE34827.1; hypothetical protein 175639 7136108 AFE_0199 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424708.1 174782 D 243159 CDS YP_002424709.1 218665569 7136771 complement(175761..176924) 1 NC_011761.1 identified by similarity to SP:P06138; match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 176924 ftsZ 7136771 ftsZ Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsZ YP_002424709.1 175761 R 243159 CDS YP_002424710.1 218665590 7135941 complement(176983..178251) 1 NC_011761.1 identified by similarity to SP:P06137; match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 178251 ftsA 7135941 ftsA Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsA YP_002424710.1 176983 R 243159 CDS YP_002424711.1 218667761 7135533 complement(178282..179124) 1 NC_011761.1 identified by similarity to SP:P06136; match to protein family HMM PF03799; match to protein family HMM PF08478; cell division protein FtsQ 179124 7135533 AFE_0202 Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsQ YP_002424711.1 178282 R 243159 CDS YP_002424712.1 218665251 7134436 complement(179117..180043) 1 NC_011761.1 identified by similarity to SP:P07862; match to protein family HMM PF01820; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine--D-alanine ligase 180043 ddlB 7134436 ddlB Acidithiobacillus ferrooxidans ATCC 23270 D-alanine--D-alanine ligase YP_002424712.1 179117 R 243159 CDS YP_002424713.1 218666607 7135740 complement(180036..180923) 1 NC_011761.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 180923 murB 7135740 murB Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002424713.1 180036 R 243159 CDS YP_002424714.1 218667206 7135338 complement(180920..182314) 1 NC_011761.1 identified by similarity to SP:P17952; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 182314 murC 7135338 murC Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylmuramate--L-alanine ligase YP_002424714.1 180920 R 243159 CDS YP_002424715.1 218665844 7135600 complement(182307..183389) 1 NC_011761.1 identified by similarity to SP:P17443; match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 183389 murG 7135600 murG Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_002424715.1 182307 R 243159 CDS YP_002424716.1 218665584 7135399 complement(183382..184554) 1 NC_011761.1 identified by similarity to SP:P16457; match to protein family HMM PF01098; match to protein family HMM TIGR02614; cell division protein FtsW 184554 ftsW 7135399 ftsW Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsW YP_002424716.1 183382 R 243159 CDS YP_002424717.1 218666253 7135526 complement(184551..185897) 1 NC_011761.1 identified by similarity to SP:P14900; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoylalanine--D-glutamate ligase 185897 murD 7135526 murD Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002424717.1 184551 R 243159 CDS YP_002424718.1 218667704 7136610 complement(185899..186981) 1 NC_011761.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 186981 mraY 7136610 mraY Acidithiobacillus ferrooxidans ATCC 23270 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002424718.1 185899 R 243159 CDS YP_002424719.1 218665628 7135487 complement(186981..188333) 1 NC_011761.1 identified by similarity to SP:P11880; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 188333 murF 7135487 murF Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_002424719.1 186981 R 243159 CDS YP_002424720.1 218667953 7135571 complement(188330..189781) 1 NC_011761.1 identified by similarity to SP:P22188; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 189781 murE 7135571 murE Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002424720.1 188330 R 243159 CDS YP_002424721.1 218666604 7135260 complement(189768..191552) 1 NC_011761.1 identified by similarity to SP:P04286; match to protein family HMM PF00905; match to protein family HMM PF03717; peptidoglycan synthetase FtsI 191552 ftsI 7135260 ftsI Acidithiobacillus ferrooxidans ATCC 23270 peptidoglycan synthetase FtsI YP_002424721.1 189768 R 243159 CDS YP_002424722.1 218665286 7135335 complement(191549..191812) 1 NC_011761.1 identified by match to protein family HMM PF04999; match to protein family HMM TIGR02209; cell division protein FtsL 191812 ftsL 7135335 ftsL Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsL YP_002424722.1 191549 R 243159 CDS YP_002424723.1 218665162 7136227 complement(191802..192767) 1 NC_011761.1 identified by similarity to SP:P18595; match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 192767 mraW 7136227 mraW Acidithiobacillus ferrooxidans ATCC 23270 S-adenosyl-methyltransferase MraW YP_002424723.1 191802 R 243159 CDS YP_002424724.1 218666931 7134314 complement(192764..193219) 1 NC_011761.1 identified by similarity to GB:AAN78597.1; match to protein family HMM PF02381; match to protein family HMM TIGR00242; mraZ protein 193219 mraZ 7134314 mraZ Acidithiobacillus ferrooxidans ATCC 23270 mraZ protein YP_002424724.1 192764 R 243159 CDS YP_002424725.1 218667874 7135993 194035..194301 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 194301 7135993 AFE_0219 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424725.1 194035 D 243159 CDS YP_002424726.1 218667162 7136533 complement(194246..195616) 1 NC_011761.1 identified by match to protein family HMM PF01743; polyA polymerase family protein 195616 7136533 AFE_0218 Acidithiobacillus ferrooxidans ATCC 23270 polyA polymerase family protein YP_002424726.1 194246 R 243159 CDS YP_002424727.1 218666535 7134710 complement(195622..197364) 1 NC_011761.1 identified by match to protein family HMM PF00501; AMP-binding protein 197364 7134710 AFE_0220 Acidithiobacillus ferrooxidans ATCC 23270 AMP-binding protein YP_002424727.1 195622 R 243159 CDS YP_002424728.1 218666650 7136347 complement(197366..197986) 1 NC_011761.1 identified by similarity to SP:P05838; match to protein family HMM PF00462; match to protein family HMM PF02798; stringent starvation protein A 197986 sspA 7136347 sspA Acidithiobacillus ferrooxidans ATCC 23270 stringent starvation protein A YP_002424728.1 197366 R 243159 CDS YP_002424729.1 218666743 7134521 197967..198086 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 198086 7134521 AFE_0222 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424729.1 197967 D 243159 CDS YP_002424730.1 218667627 7137238 198276..199190 1 NC_011761.1 identified by similarity to SP:P47205; match to protein family HMM PF03331; match to protein family HMM TIGR00325; UDP-3-0-acyl N-acetylglucosamine deacetylase 199190 lpxC 7137238 lpxC Acidithiobacillus ferrooxidans ATCC 23270 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_002424730.1 198276 D 243159 CDS YP_002424731.1 218667964 7135801 199584..199679 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 199679 7135801 AFE_0224 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424731.1 199584 D 243159 CDS YP_002424732.1 218665025 7135271 199695..202439 1 NC_011761.1 identified by similarity to SP:P10408; match to protein family HMM PF00271; match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; Preprotein translocase subunit SecA 202439 secA 7135271 secA Acidithiobacillus ferrooxidans ATCC 23270 Preprotein translocase subunit SecA YP_002424732.1 199695 D 243159 CDS YP_002424733.1 218667262 7134953 202449..203675 1 NC_011761.1 identified by similarity to SP:P38434; match to protein family HMM PF01960; match to protein family HMM TIGR00120; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 203675 argJ 7134953 argJ Acidithiobacillus ferrooxidans ATCC 23270 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_002424733.1 202449 D 243159 CDS YP_002424734.1 218667936 7135657 203675..204664 1 NC_011761.1 identified by match to protein family HMM PF00293; match to protein family HMM PF02581; match to protein family HMM TIGR00586; mutator mutT protein/thiamine-phosphate pyrophosphorylase family protein 204664 7135657 AFE_0227 Acidithiobacillus ferrooxidans ATCC 23270 mutator mutT protein/thiamine-phosphate pyrophosphorylase family protein YP_002424734.1 203675 D 243159 CDS YP_002424735.1 218665465 7135243 204665..205627 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 205627 7135243 AFE_0228 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002424735.1 204665 D 243159 CDS YP_002424736.1 218666135 7135078 205624..206340 1 NC_011761.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 206340 7135078 AFE_0229 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide deacetylase family protein YP_002424736.1 205624 D 243159 CDS YP_002424737.1 218667413 7134035 206406..207416 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 207416 7134035 AFE_0230 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002424737.1 206406 D 243159 CDS YP_002424738.1 218665054 7136937 207671..209062 1 NC_011761.1 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 209062 7136937 AFE_0231 Acidithiobacillus ferrooxidans ATCC 23270 dolichyl-phosphate-mannose-protein mannosyltransferase family protein YP_002424738.1 207671 D 243159 CDS YP_002424739.1 218667637 7134983 209110..210363 1 NC_011761.1 identified by match to protein family HMM PF04932; O-antigen polymerase family protein 210363 7134983 AFE_0232 Acidithiobacillus ferrooxidans ATCC 23270 O-antigen polymerase family protein YP_002424739.1 209110 D 243159 CDS YP_002424740.1 218666971 7135811 210412..211359 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 211359 7135811 AFE_0233 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002424740.1 210412 D 243159 CDS YP_002424741.1 218665427 7134834 211360..212157 1 NC_011761.1 identified by similarity to SP:Q9XC90; match to protein family HMM PF00535; lipopolysaccharide core biosynthesis glycosyl transferase 212157 7134834 AFE_0234 Acidithiobacillus ferrooxidans ATCC 23270 lipopolysaccharide core biosynthesis glycosyl transferase YP_002424741.1 211360 D 243159 CDS YP_002424742.1 218667929 7135039 212157..213209 1 NC_011761.1 identified by similarity to SP:P24173; match to protein family HMM PF01075; match to protein family HMM TIGR02193; lipopolysaccharide heptosyltransferase 1 213209 rfaC 7135039 rfaC Acidithiobacillus ferrooxidans ATCC 23270 lipopolysaccharide heptosyltransferase 1 YP_002424742.1 212157 D 243159 CDS YP_002424743.1 218668152 7135236 213206..213886 1 NC_011761.1 identified by similarity to GB:AAK22293.1; hypothetical protein 213886 7135236 AFE_0236 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424743.1 213206 D 243159 CDS YP_002424744.1 218665332 7135971 213883..215136 1 NC_011761.1 identified by similarity to SP:P23282; match to protein family HMM PF04413; 3-deoxy-D-manno-octulosonic-acid transferase 215136 kdtA 7135971 kdtA Acidithiobacillus ferrooxidans ATCC 23270 3-deoxy-D-manno-octulosonic-acid transferase YP_002424744.1 213883 D 243159 CDS YP_002424745.1 218667776 7136273 complement(215142..216050) 1 NC_011761.1 identified by similarity to SP:P24187; match to protein family HMM PF03279; lipid A biosynthesis lauroyl acyltransferase 216050 7136273 AFE_0238 Acidithiobacillus ferrooxidans ATCC 23270 lipid A biosynthesis lauroyl acyltransferase YP_002424745.1 215142 R 243159 CDS YP_002424746.1 218666397 7134451 complement(216151..217308) 1 NC_011761.1 identified by similarity to SP:P23256; similarity to SP:Q08432; match to protein family HMM PF00155; class II aminotransferase 217308 7134451 AFE_0239 Acidithiobacillus ferrooxidans ATCC 23270 class II aminotransferase YP_002424746.1 216151 R 243159 CDS YP_002424747.1 218667111 7134341 complement(217305..219413) 1 NC_011761.1 identified by similarity to GB:CAD86313.1; match to protein family HMM PF03781; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 219413 7134341 AFE_0240 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424747.1 217305 R 243159 CDS YP_002424748.1 218666125 7136711 complement(219457..219972) 1 NC_011761.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00185; TrmH family RNA methyltransferase 219972 7136711 AFE_0241 Acidithiobacillus ferrooxidans ATCC 23270 TrmH family RNA methyltransferase YP_002424748.1 219457 R 243159 CDS YP_002424749.1 218668080 7134025 complement(219983..220774) 1 NC_011761.1 identified by similarity to SP:P31773; competence protein 220774 comF 7134025 comF Acidithiobacillus ferrooxidans ATCC 23270 competence protein YP_002424749.1 219983 R 243159 CDS YP_002424750.1 218665576 7136816 220808..221977 1 NC_011761.1 identified by similarity to SP:P12998; match to protein family HMM PF00155; match to protein family HMM TIGR00858; 8-amino-7-oxononanoate synthase 221977 bioF 7136816 bioF Acidithiobacillus ferrooxidans ATCC 23270 8-amino-7-oxononanoate synthase YP_002424750.1 220808 D 243159 CDS YP_002424751.1 218667837 7135948 221974..222738 1 NC_011761.1 identified by similarity to SP:P13001; match to protein family HMM PF00561; match to protein family HMM TIGR01738; bioH protein 222738 bioH 7135948 bioH Acidithiobacillus ferrooxidans ATCC 23270 bioH protein YP_002424751.1 221974 D 243159 CDS YP_002424752.1 218667308 7134915 222735..223613 1 NC_011761.1 identified by similarity to SP:P12999; match to protein family HMM PF02828; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR02072; biotin synthesis protein BioC 223613 bioC 7134915 bioC Acidithiobacillus ferrooxidans ATCC 23270 biotin synthesis protein BioC YP_002424752.1 222735 D 243159 CDS YP_002424753.1 218665942 7135152 223610..224314 1 NC_011761.1 identified by match to protein family HMM TIGR00347; dethiobiotin synthetase 224314 bioD-2 7135152 bioD-2 Acidithiobacillus ferrooxidans ATCC 23270 dethiobiotin synthetase YP_002424753.1 223610 D 243159 CDS YP_002424754.1 218667729 7134152 224428..225324 1 NC_011761.1 identified by similarity to SP:P23894; match to protein family HMM PF01435; heat shock protein HtpX 225324 htpX-2 7134152 htpX-2 Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein HtpX YP_002424754.1 224428 D 243159 CDS YP_002424755.1 218666174 7135512 225371..226096 1 NC_011761.1 identified by similarity to SP:P23885; match to protein family HMM PF03588; match to protein family HMM TIGR00667; leucyl/phenylalanyl-tRNA--protein transferase 226096 aat 7135512 aat Acidithiobacillus ferrooxidans ATCC 23270 leucyl/phenylalanyl-tRNA--protein transferase YP_002424755.1 225371 D 243159 CDS YP_002424756.1 218666762 7134075 226099..226809 1 NC_011761.1 identified by match to protein family HMM PF04376; match to protein family HMM PF04377; arginine-tRNA--protein transferase 226809 ate 7134075 ate Acidithiobacillus ferrooxidans ATCC 23270 arginine-tRNA--protein transferase YP_002424756.1 226099 D 243159 CDS YP_002424757.1 218666569 7137258 226806..227585 1 NC_011761.1 identified by match to protein family HMM PF03649; match to protein family HMM TIGR00245; hypothetical protein 227585 7137258 AFE_0250 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424757.1 226806 D 243159 CDS YP_002424758.1 218667091 7135299 227592..228197 1 NC_011761.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 228197 rnt 7135299 rnt Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease T YP_002424758.1 227592 D 243159 CDS YP_002424759.1 218665363 7136691 228273..229289 1 NC_011761.1 identified by similarity to SP:P37911; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase 229289 7136691 AFE_0252 Acidithiobacillus ferrooxidans ATCC 23270 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase YP_002424759.1 228273 D 243159 CDS YP_002424760.1 218666544 7136145 229352..229720 1 NC_011761.1 hypothetical protein 229720 7136145 AFE_0253 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424760.1 229352 D 243159 CDS YP_002424761.1 218665214 7136356 complement(230113..231051) 1 NC_011761.1 hypothetical protein 231051 7136356 AFE_0254 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424761.1 230113 R 243159 CDS YP_002424762.1 218667089 7135702 231155..231886 1 NC_011761.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 231886 7135702 AFE_0255 Acidithiobacillus ferrooxidans ATCC 23270 TetR family transcriptional regulator YP_002424762.1 231155 D 243159 CDS YP_002424763.1 218666321 7136689 231883..232755 1 NC_011761.1 identified by similarity to SP:P59300; match to protein family HMM PF00696; match to protein family HMM TIGR00761; acetylglutamate kinase 232755 argB 7136689 argB Acidithiobacillus ferrooxidans ATCC 23270 acetylglutamate kinase YP_002424763.1 231883 D 243159 CDS YP_002424764.1 218668092 7136460 complement(232838..233851) 1 NC_011761.1 identified by match to protein family HMM PF00529; secretion protein, HlyD family 233851 7136460 AFE_0257 Acidithiobacillus ferrooxidans ATCC 23270 secretion protein, HlyD family YP_002424764.1 232838 R 243159 CDS YP_002424765.1 218665225 7136828 234088..234654 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 234654 7136828 AFE_0258 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424765.1 234088 D 243159 CDS YP_002424766.1 218667747 7135713 complement(234701..235651) 1 NC_011761.1 identified by similarity to SP:P12996; match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433; biotin synthase 235651 bioB 7135713 bioB Acidithiobacillus ferrooxidans ATCC 23270 biotin synthase YP_002424766.1 234701 R 243159 CDS YP_002424767.1 218665107 7134421 complement(235648..235998) 1 NC_011761.1 identified by similarity to SP:Q8DCB7; match to protein family HMM PF02594; hypothetical protein 235998 7134421 AFE_0260 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424767.1 235648 R 243159 CDS YP_002424768.1 218667465 7134258 complement(236023..236301) 1 NC_011761.1 identified by match to protein family HMM PF02325; hypothetical protein 236301 7134258 AFE_0261 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424768.1 236023 R 243159 CDS YP_002424769.1 218668024 7136756 complement(236298..237125) 1 NC_011761.1 identified by similarity to SP:P22008; match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 237125 proC 7136756 proC Acidithiobacillus ferrooxidans ATCC 23270 pyrroline-5-carboxylate reductase YP_002424769.1 236298 R 243159 CDS YP_002424770.1 218665726 7134789 complement(237122..237790) 1 NC_011761.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein 237790 7134789 AFE_0263 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424770.1 237122 R 243159 CDS YP_002424771.1 218666349 7136041 237892..238941 1 NC_011761.1 identified by similarity to SP:P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilT 238941 pilT-2 7136041 pilT-2 Acidithiobacillus ferrooxidans ATCC 23270 twitching motility protein PilT YP_002424771.1 237892 D 243159 CDS YP_002424772.1 218666306 7136488 238951..240081 1 NC_011761.1 identified by similarity to GB:AAL37755.1; match to protein family HMM PF00437; match to protein family HMM TIGR01420; twitching motility protein PilT 240081 pilT-1 7136488 pilT-1 Acidithiobacillus ferrooxidans ATCC 23270 twitching motility protein PilT YP_002424772.1 238951 D 243159 CDS YP_002424773.1 218668135 7137037 240009..241235 1 NC_011761.1 identified by match to protein family HMM PF00535; match to protein family HMM TIGR03469; glycosyl transferase family protein 241235 7137037 AFE_0266 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002424773.1 240009 D 243159 CDS YP_002424774.1 218667259 7135954 complement(241295..242422) 1 NC_011761.1 identified by similarity to GB:AAF72963.1; match to protein family HMM PF07992; sulfide quinone reductase 242422 sqr 7135954 sqr Acidithiobacillus ferrooxidans ATCC 23270 sulfide quinone reductase YP_002424774.1 241295 R 243159 CDS YP_002424775.1 218665112 7135653 complement(242547..243164) 1 NC_011761.1 identified by similarity to GB:CAD79002.1; hypothetical protein 243164 7135653 AFE_0268 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424775.1 242547 R 243159 CDS YP_002424776.1 218666552 7134263 complement(243177..243866) 1 NC_011761.1 identified by similarity to PIR:S74892; match to protein family HMM PF00753; metallo-beta-lactamase family protein 243866 7134263 AFE_0269 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002424776.1 243177 R 243159 CDS YP_002424777.1 218667851 7135282 complement(244007..244708) 1 NC_011761.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; CarD family transcriptional regulator 244708 7135282 AFE_0270 Acidithiobacillus ferrooxidans ATCC 23270 CarD family transcriptional regulator YP_002424777.1 244007 R 243159 CDS YP_002424778.1 218665760 7134929 complement(244705..245388) 1 NC_011761.1 identified by similarity to SP:Q87AE9; match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 245388 trmB 7134929 trmB Acidithiobacillus ferrooxidans ATCC 23270 tRNA (guanine-N(7)-)-methyltransferase YP_002424778.1 244705 R 243159 CDS YP_002424779.1 218666048 7136075 245435..245932 1 NC_011761.1 identified by similarity to SP:P12044; match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 245932 purE 7136075 purE Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_002424779.1 245435 D 243159 CDS YP_002424780.1 218667169 7136968 245929..247062 1 NC_011761.1 identified by similarity to SP:P12045; match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 247062 purK 7136968 purK Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_002424780.1 245929 D 243159 CDS YP_002424781.1 218665087 7134718 complement(247096..247632) 1 NC_011761.1 identified by similarity to SP:P30018; disulfide bond formation protein B 247632 7134718 AFE_0274 Acidithiobacillus ferrooxidans ATCC 23270 disulfide bond formation protein B YP_002424781.1 247096 R 243159 CDS YP_002424782.1 218665912 7135017 complement(247605..248216) 1 NC_011761.1 identified by similarity to SP:P77202; thiol:disulfide interchange domain-containing protein 248216 7135017 AFE_0275 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange domain-containing protein YP_002424782.1 247605 R 243159 CDS YP_002424783.1 218666524 7134122 complement(248213..249883) 1 NC_011761.1 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 249883 7134122 AFE_0276 Acidithiobacillus ferrooxidans ATCC 23270 dolichyl-phosphate-mannose-protein mannosyltransferase family protein YP_002424783.1 248213 R 243159 CDS YP_002424784.1 218666519 7136336 complement(249876..250337) 1 NC_011761.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 250337 smpB 7136336 smpB Acidithiobacillus ferrooxidans ATCC 23270 SsrA-binding protein YP_002424784.1 249876 R 243159 CDS YP_002424785.1 218667036 7136331 250534..251634 1 NC_011761.1 identified by match to protein family HMM PF00614; phospholipase D 251634 7136331 AFE_0278 Acidithiobacillus ferrooxidans ATCC 23270 phospholipase D YP_002424785.1 250534 D 243159 CDS YP_002424786.1 218665684 7136636 251644..252129 1 NC_011761.1 identified by match to protein family HMM PF03364; hypothetical protein 252129 7136636 AFE_0280 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424786.1 251644 D 243159 CDS YP_002424787.1 218666830 7137167 complement(252126..252473) 1 NC_011761.1 identified by similarity to GB:AAN70303.1; match to protein family HMM PF04355; lipoprotein, SmpA/OmlA family 252473 7137167 AFE_0279 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein, SmpA/OmlA family YP_002424787.1 252126 R 243159 CDS YP_002424788.1 218667824 7137079 252540..253016 1 NC_011761.1 identified by similarity to SP:P06975; match to protein family HMM PF01475; ferric uptake regulation protein 253016 fur 7137079 fur Acidithiobacillus ferrooxidans ATCC 23270 ferric uptake regulation protein YP_002424788.1 252540 D 243159 CDS YP_002424789.1 218665182 7134902 complement(253013..254143) 1 NC_011761.1 identified by similarity to SP:P07005; match to protein family HMM PF00696; match to protein family HMM PF01472; match to protein family HMM TIGR01027; glutamate 5-kinase 254143 proB-3 7134902 proB-3 Acidithiobacillus ferrooxidans ATCC 23270 glutamate 5-kinase YP_002424789.1 253013 R 243159 CDS YP_002424790.1 218667562 7135668 complement(254140..255264) 1 NC_011761.1 identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR02729; GTP-binding protein Obg/CgtA 255264 7135668 AFE_0283 Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein Obg/CgtA YP_002424790.1 254140 R 243159 CDS YP_002424791.1 218665324 7136428 complement(255320..255580) 1 NC_011761.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 255580 rpmA 7136428 rpmA Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L27 YP_002424791.1 255320 R 243159 CDS YP_002424792.1 218666704 7136265 complement(255592..255903) 1 NC_011761.1 identified by similarity to SP:P02422; match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 255903 rplU 7136265 rplU Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L21 YP_002424792.1 255592 R 243159 CDS YP_002424793.1 218668104 7134575 complement(256086..257636) 1 NC_011761.1 identified by match to protein family HMM PF00916; sulfate transporter family protein 257636 7134575 AFE_0286 Acidithiobacillus ferrooxidans ATCC 23270 sulfate transporter family protein YP_002424793.1 256086 R 243159 CDS YP_002424794.1 218666251 7136840 complement(257646..258275) 1 NC_011761.1 identified by similarity to PIR:AI3279; match to protein family HMM PF00484; carbonic anhydrase 258275 7136840 AFE_0287 Acidithiobacillus ferrooxidans ATCC 23270 carbonic anhydrase YP_002424794.1 257646 R 243159 CDS YP_002424795.1 218668125 7136608 complement(258443..260797) 1 NC_011761.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 260797 metE 7136608 metE Acidithiobacillus ferrooxidans ATCC 23270 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_002424795.1 258443 R 243159 CDS YP_002424796.1 218666331 7136862 260783..260896 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 260896 7136862 AFE_0290 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424796.1 260783 D 243159 CDS YP_002424797.1 218666824 7136470 complement(260893..261678) 1 NC_011761.1 identified by similarity to SP:P27851; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934; ubiquinone/menaquinone biosynthesis methlytransferase UbiE 261678 ubiE 7136470 ubiE Acidithiobacillus ferrooxidans ATCC 23270 ubiquinone/menaquinone biosynthesis methlytransferase UbiE YP_002424797.1 260893 R 243159 CDS YP_002424798.1 218665219 7137073 complement(261726..262382) 1 NC_011761.1 identified by match to protein family HMM PF02798; glutathione S-transferase family protein 262382 7137073 AFE_0291 Acidithiobacillus ferrooxidans ATCC 23270 glutathione S-transferase family protein YP_002424798.1 261726 R 243159 CDS YP_002424799.1 218666620 7135707 complement(262402..263007) 1 NC_011761.1 identified by similarity to GB:AAO58478.1; match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM TIGR02081; methionine biosynthesis protein MetW 263007 metW 7135707 metW Acidithiobacillus ferrooxidans ATCC 23270 methionine biosynthesis protein MetW YP_002424799.1 262402 R 243159 CDS YP_002424800.1 218666128 7135351 complement(263004..264155) 1 NC_011761.1 identified by similarity to SP:P45131; match to protein family HMM PF00561; match to protein family HMM TIGR01392; homoserine O-acetyltransferase 264155 metX 7135351 metX Acidithiobacillus ferrooxidans ATCC 23270 homoserine O-acetyltransferase YP_002424800.1 263004 R 243159 CDS YP_002424801.1 218666246 7134028 264373..265125 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 265125 7134028 AFE_0294 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424801.1 264373 D 243159 CDS YP_002424802.1 218666113 7136603 265259..266503 1 NC_011761.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 266503 glyA 7136603 glyA Acidithiobacillus ferrooxidans ATCC 23270 serine hydroxymethyltransferase YP_002424802.1 265259 D 243159 CDS YP_002424803.1 218668029 7137034 266510..267001 1 NC_011761.1 identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR 267001 nrdR 7137034 nrdR Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator NrdR YP_002424803.1 266510 D 243159 CDS YP_002424804.1 218668008 7134794 266991..268091 1 NC_011761.1 identified by similarity to SP:P25539; match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 268091 ribD 7134794 ribD Acidithiobacillus ferrooxidans ATCC 23270 riboflavin biosynthesis protein RibD YP_002424804.1 266991 D 243159 CDS YP_002424805.1 218666123 7134773 268095..268751 1 NC_011761.1 identified by similarity to SP:P50854; match to protein family HMM PF00677; match to protein family HMM TIGR00187; riboflavin synthase subunit alpha 268751 ribE 7134773 ribE Acidithiobacillus ferrooxidans ATCC 23270 riboflavin synthase subunit alpha YP_002424805.1 268095 D 243159 CDS YP_002424806.1 218665266 7134022 268748..269881 1 NC_011761.1 identified by similarity to SP:P17620; match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 269881 ribBA 7134022 ribBA Acidithiobacillus ferrooxidans ATCC 23270 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002424806.1 268748 D 243159 CDS YP_002424807.1 218665285 7136207 269878..270342 1 NC_011761.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 270342 ribH 7136207 ribH Acidithiobacillus ferrooxidans ATCC 23270 6,7-dimethyl-8-ribityllumazine synthase YP_002424807.1 269878 D 243159 CDS YP_002424808.1 218667110 7136226 270353..270796 1 NC_011761.1 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 270796 nusB 7136226 nusB Acidithiobacillus ferrooxidans ATCC 23270 transcription antitermination factor NusB YP_002424808.1 270353 D 243159 CDS YP_002424809.1 218666278 7136710 270924..271205 1 NC_011761.1 identified by similarity to PIR:B42680; hypothetical protein 271205 7136710 AFE_0302 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424809.1 270924 D 243159 CDS YP_002424810.1 218665158 7137286 271364..271936 1 NC_011761.1 identified by match to protein family HMM PF08238; hypothetical protein 271936 7137286 AFE_0303 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424810.1 271364 D 243159 CDS YP_002424811.1 218668037 7134310 complement(271954..272307) 1 NC_011761.1 identified by similarity to GB:AAM24168.1; hypothetical protein 272307 7134310 AFE_0304 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424811.1 271954 R 243159 CDS YP_002424812.1 218666924 7134802 complement(272362..274044) 1 NC_011761.1 identified by match to protein family HMM PF03109; match to protein family HMM TIGR01982; 2-polyprenylphenol 6-hydroxylase 274044 ubiB 7134802 ubiB Acidithiobacillus ferrooxidans ATCC 23270 2-polyprenylphenol 6-hydroxylase YP_002424812.1 272362 R 243159 CDS YP_002424813.1 218667641 7134634 complement(274144..274797) 1 NC_011761.1 identified by similarity to SP:Q05146; match to protein family HMM PF00691; OmpA family protein 274797 7134634 AFE_0306 Acidithiobacillus ferrooxidans ATCC 23270 OmpA family protein YP_002424813.1 274144 R 243159 CDS YP_002424814.1 218666448 7135815 274789..274986 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 274986 7135815 AFE_0307 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424814.1 274789 D 243159 CDS YP_002424815.1 218665194 7136011 275372..276562 1 NC_011761.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 276562 tuf-2 7136011 tuf-2 Acidithiobacillus ferrooxidans ATCC 23270 elongation factor Tu YP_002424815.1 275372 D 243159 CDS YP_002424816.1 218665561 7136030 276713..277063 1 NC_011761.1 identified by similarity to SP:P16920; match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE 277063 secE 7136030 secE Acidithiobacillus ferrooxidans ATCC 23270 Preprotein translocase subunit SecE YP_002424816.1 276713 D 243159 CDS YP_002424817.1 218666542 7135933 277064..277597 1 NC_011761.1 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 277597 nusG 7135933 nusG Acidithiobacillus ferrooxidans ATCC 23270 transcription termination/antitermination factor NusG YP_002424817.1 277064 D 243159 CDS YP_002424818.1 218666877 7136354 277651..278079 1 NC_011761.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 278079 rplK 7136354 rplK Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L11 YP_002424818.1 277651 D 243159 CDS YP_002424819.1 218665236 7134587 278083..278775 1 NC_011761.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 278775 rplA 7134587 rplA Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L1 YP_002424819.1 278083 D 243159 CDS YP_002424820.1 218666408 7135724 278919..279440 1 NC_011761.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 279440 rplJ 7135724 rplJ Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L10 YP_002424820.1 278919 D 243159 CDS YP_002424821.1 218666954 7134352 279470..279856 1 NC_011761.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 279856 rplL 7134352 rplL Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L7/L12 YP_002424821.1 279470 D 243159 CDS YP_002424822.1 218665165 7134664 complement(279879..279977) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 279977 7134664 AFE_0319 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424822.1 279879 R 243159 CDS YP_002424823.1 218666714 7134317 279980..284068 1 NC_011761.1 identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta 284068 rpoB 7134317 rpoB Acidithiobacillus ferrooxidans ATCC 23270 DNA-directed RNA polymerase subunit beta YP_002424823.1 279980 D 243159 CDS YP_002424824.1 218668112 7137209 284102..288256 1 NC_011761.1 identified by similarity to SP:P00577; match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' 288256 rpoC 7137209 rpoC Acidithiobacillus ferrooxidans ATCC 23270 DNA-directed RNA polymerase subunit beta' YP_002424824.1 284102 D 243159 CDS YP_002424825.1 218665629 7136849 288366..288737 1 NC_011761.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 288737 rpsL 7136849 rpsL Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S12 YP_002424825.1 288366 D 243159 CDS YP_002424826.1 218666371 7135572 288764..289234 1 NC_011761.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 289234 rpsG 7135572 rpsG Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S7 YP_002424826.1 288764 D 243159 CDS YP_002424827.1 218668107 7136511 289267..291366 1 NC_011761.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 291366 fusA 7136511 fusA Acidithiobacillus ferrooxidans ATCC 23270 elongation factor G YP_002424827.1 289267 D 243159 CDS YP_002424828.1 218666143 7136844 291387..292577 1 NC_011761.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 292577 tuf-1 7136844 tuf-1 Acidithiobacillus ferrooxidans ATCC 23270 elongation factor Tu YP_002424828.1 291387 D 243159 CDS YP_002424829.1 218666591 7134043 292577..292885 1 NC_011761.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 292885 rpsJ 7134043 rpsJ Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S10 YP_002424829.1 292577 D 243159 CDS YP_002424830.1 218666383 7135321 292903..293535 1 NC_011761.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 293535 rplC 7135321 rplC Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L3 YP_002424830.1 292903 D 243159 CDS YP_002424831.1 218666574 7136523 293546..294163 1 NC_011761.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 294163 rplD 7136523 rplD Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L4 YP_002424831.1 293546 D 243159 CDS YP_002424832.1 218667035 7135304 294160..294453 1 NC_011761.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 294453 rplW 7135304 rplW Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L23 YP_002424832.1 294160 D 243159 CDS YP_002424833.1 218667921 7136550 294470..295294 1 NC_011761.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 295294 rplB 7136550 rplB Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L2 YP_002424833.1 294470 D 243159 CDS YP_002424834.1 218665951 7135228 295313..295588 1 NC_011761.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 295588 rpsS 7135228 rpsS Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S19 YP_002424834.1 295313 D 243159 CDS YP_002424835.1 218665094 7134161 295600..295935 1 NC_011761.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 295935 rplV 7134161 rplV Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L22 YP_002424835.1 295600 D 243159 CDS YP_002424836.1 218667516 7135025 295919..296605 1 NC_011761.1 identified by similarity to SP:P02352; match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 296605 rpsC 7135025 rpsC Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S3 YP_002424836.1 295919 D 243159 CDS YP_002424837.1 218666486 7136381 296618..297034 1 NC_011761.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 297034 rplP 7136381 rplP Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L16 YP_002424837.1 296618 D 243159 CDS YP_002424838.1 218668146 7136296 297031..297228 1 NC_011761.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 297228 rpmC 7136296 rpmC Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L29 YP_002424838.1 297031 D 243159 CDS YP_002424839.1 218666491 7135965 297225..297500 1 NC_011761.1 identified by similarity to SP:P02373; match to protein family HMM PF00366; 30S ribosomal protein S17 297500 rpS17 7135965 rpS17 Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S17 YP_002424839.1 297225 D 243159 CDS YP_002424840.1 218665085 7136301 297497..297865 1 NC_011761.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 297865 rplN 7136301 rplN Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L14 YP_002424840.1 297497 D 243159 CDS YP_002424841.1 218666913 7135015 297875..298195 1 NC_011761.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 298195 rplX 7135015 rplX Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L24 YP_002424841.1 297875 D 243159 CDS YP_002424842.1 218665527 7134623 298210..298752 1 NC_011761.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 298752 rplE 7134623 rplE Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L5 YP_002424842.1 298210 D 243159 CDS YP_002424843.1 218667187 7135898 298766..298951 1 NC_011761.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 298951 rpsN 7135898 rpsN Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S14 YP_002424843.1 298766 D 243159 CDS YP_002424844.1 218666199 7136548 298961..299356 1 NC_011761.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 299356 rpsH 7136548 rpsH Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S8 YP_002424844.1 298961 D 243159 CDS YP_002424845.1 218667084 7136555 299370..299894 1 NC_011761.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 299894 rplF 7136555 rplF Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L6 YP_002424845.1 299370 D 243159 CDS YP_002424846.1 218667561 7136684 299913..300266 1 NC_011761.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 300266 rplR 7136684 rplR Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L18 YP_002424846.1 299913 D 243159 CDS YP_002424847.1 218665369 7136427 300279..300809 1 NC_011761.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 300809 rpsE 7136427 rpsE Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S5 YP_002424847.1 300279 D 243159 CDS YP_002424848.1 218665488 7136151 300802..300987 1 NC_011761.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 300987 rpmD 7136151 rpmD Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L30 YP_002424848.1 300802 D 243159 CDS YP_002424849.1 218666698 7135101 300984..301421 1 NC_011761.1 late assembly protein; 50S ribosomal protein L15 301421 rplO 7135101 rplO Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L15 YP_002424849.1 300984 D 243159 CDS YP_002424850.1 218667727 7134569 301421..302752 1 NC_011761.1 identified by similarity to SP:P03844; match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY 302752 secY 7134569 secY Acidithiobacillus ferrooxidans ATCC 23270 preprotein translocase subunit SecY YP_002424850.1 301421 D 243159 CDS YP_002424851.1 218665970 7135510 302755..303411 1 NC_011761.1 identified by similarity to SP:P27142; match to protein family HMM PF00406; match to protein family HMM PF05191; match to protein family HMM TIGR01351; adenylate kinase 303411 adk 7135510 adk Acidithiobacillus ferrooxidans ATCC 23270 adenylate kinase YP_002424851.1 302755 D 243159 CDS YP_002424852.1 218666290 7134183 303412..303630 1 NC_011761.1 identified by similarity to SP:P02998; match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 303630 infA 7134183 infA Acidithiobacillus ferrooxidans ATCC 23270 translation initiation factor IF-1 YP_002424852.1 303412 D 243159 CDS YP_002424853.1 218665441 7137298 303639..303752 1 NC_011761.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 303752 rpmJ 7137298 rpmJ Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L36 YP_002424853.1 303639 D 243159 CDS YP_002424854.1 218667353 7135053 303816..304172 1 NC_011761.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 304172 rpsM 7135053 rpsM Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S13 YP_002424854.1 303816 D 243159 CDS YP_002424855.1 218666308 7136875 304190..304585 1 NC_011761.1 identified by similarity to SP:P02366; match to protein family HMM PF00411; 30S ribosomal protein S11 304585 rpsK 7136875 rpsK Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S11 YP_002424855.1 304190 D 243159 CDS YP_002424856.1 218667358 7136446 304606..305232 1 NC_011761.1 identified by similarity to SP:P02354; match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 305232 rpsD 7136446 rpsD Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S4 YP_002424856.1 304606 D 243159 CDS YP_002424857.1 218666577 7136880 305255..306274 1 NC_011761.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 306274 rpoA 7136880 rpoA Acidithiobacillus ferrooxidans ATCC 23270 DNA-directed RNA polymerase subunit alpha YP_002424857.1 305255 D 243159 CDS YP_002424858.1 218665668 7135307 306305..306679 1 NC_011761.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 306679 rplQ 7135307 rplQ Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L17 YP_002424858.1 306305 D 243159 CDS YP_002424859.1 218666985 7137151 complement(306843..307295) 1 NC_011761.1 identified by similarity to SP:P06968; match to protein family HMM PF00692; match to protein family HMM TIGR00576; deoxyuridine 5`-triphosphate nucleotidohydrolase 307295 dut 7137151 dut Acidithiobacillus ferrooxidans ATCC 23270 deoxyuridine 5`-triphosphate nucleotidohydrolase YP_002424859.1 306843 R 243159 CDS YP_002424860.1 218666181 7134848 complement(307288..308544) 1 NC_011761.1 identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 308544 coaBC 7134848 coaBC Acidithiobacillus ferrooxidans ATCC 23270 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_002424860.1 307288 R 243159 CDS YP_002424861.1 218667466 7134082 308577..309251 1 NC_011761.1 identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC 309251 radC 7134082 radC Acidithiobacillus ferrooxidans ATCC 23270 DNA repair protein RadC YP_002424861.1 308577 D 243159 CDS YP_002424862.1 218666664 7136757 309248..309613 1 NC_011761.1 identified by similarity to SP:P19638; match to protein family HMM PF01219; diacylglycerol kinase 309613 dgkA 7136757 dgkA Acidithiobacillus ferrooxidans ATCC 23270 diacylglycerol kinase YP_002424862.1 309248 D 243159 CDS YP_002424863.1 218665498 7134535 309617..310363 1 NC_011761.1 identified by match to protein family HMM PF01569; PAP2 family protein 310363 7134535 AFE_0360 Acidithiobacillus ferrooxidans ATCC 23270 PAP2 family protein YP_002424863.1 309617 D 243159 CDS YP_002424864.1 218666318 7135111 310347..310886 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 310886 7135111 AFE_0361 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424864.1 310347 D 243159 CDS YP_002424865.1 218667208 7136457 310910..311266 1 NC_011761.1 identified by similarity to GB:BAB50383.1; hypothetical protein 311266 7136457 AFE_0362 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424865.1 310910 D 243159 CDS YP_002424866.1 218665096 7135602 311378..311755 1 NC_011761.1 identified by similarity to PIR:C70335; hypothetical protein 311755 7135602 AFE_0363 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424866.1 311378 D 243159 CDS YP_002424867.1 218666967 7134165 311727..312311 1 NC_011761.1 identified by similarity to SP:P37472; match to protein family HMM PF00156; hypoxanthine-guanine phosphoribosyltransferase 312311 7134165 AFE_0364 Acidithiobacillus ferrooxidans ATCC 23270 hypoxanthine-guanine phosphoribosyltransferase YP_002424867.1 311727 D 243159 CDS YP_002424868.1 218665486 7134830 312311..313123 1 NC_011761.1 identified by match to protein family HMM PF00896; match to protein family HMM TIGR01694; methylthioadenosine phosphorylase 313123 mtaP 7134830 mtaP Acidithiobacillus ferrooxidans ATCC 23270 methylthioadenosine phosphorylase YP_002424868.1 312311 D 243159 CDS YP_002424869.1 218665097 7135099 complement(313146..314495) 1 NC_011761.1 identified by similarity to SP:P06715; match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR01421; glutathione reductase 314495 gor 7135099 gor Acidithiobacillus ferrooxidans ATCC 23270 glutathione reductase YP_002424869.1 313146 R 243159 CDS YP_002424870.1 218666302 7134248 complement(314585..315328) 1 NC_011761.1 identified by match to protein family HMM PF00462; match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR02190; AhpC/TSA family/glutaredoxin domain-containing protein 315328 7134248 AFE_0367 Acidithiobacillus ferrooxidans ATCC 23270 AhpC/TSA family/glutaredoxin domain-containing protein YP_002424870.1 314585 R 243159 CDS YP_002424871.1 218667764 7137310 complement(315464..316447) 1 NC_011761.1 identified by similarity to SP:P06862; match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase 316447 serB 7137310 serB Acidithiobacillus ferrooxidans ATCC 23270 phosphoserine phosphatase YP_002424871.1 315464 R 243159 CDS YP_002424872.1 218666669 7134439 complement(316579..320028) 1 NC_011761.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 320028 mfd 7134439 mfd Acidithiobacillus ferrooxidans ATCC 23270 transcription-repair coupling factor YP_002424872.1 316579 R 243159 CDS YP_002424873.1 218668083 7134540 320180..320893 1 NC_011761.1 identified by similarity to SP:Q46893; match to protein family HMM PF01128; match to protein family HMM TIGR00453; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 320893 ispD 7134540 ispD Acidithiobacillus ferrooxidans ATCC 23270 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_002424873.1 320180 D 243159 CDS YP_002424874.1 218667314 7136819 320904..321377 1 NC_011761.1 identified by similarity to SP:P36663; match to protein family HMM PF02542; match to protein family HMM TIGR00151; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 321377 ispF 7136819 ispF Acidithiobacillus ferrooxidans ATCC 23270 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_002424874.1 320904 D 243159 CDS YP_002424875.1 218667505 7135158 321370..322458 1 NC_011761.1 identified by similarity to SP:Q57261; match to protein family HMM PF01142; match to protein family HMM TIGR00094; tRNA pseudouridine synthase D 322458 truD 7135158 truD Acidithiobacillus ferrooxidans ATCC 23270 tRNA pseudouridine synthase D YP_002424875.1 321370 D 243159 CDS YP_002424876.1 218666945 7136370 322534..323010 1 NC_011761.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278; MerR family transcriptional regulator 323010 7136370 AFE_0373 Acidithiobacillus ferrooxidans ATCC 23270 MerR family transcriptional regulator YP_002424876.1 322534 D 243159 CDS YP_002424877.1 218666212 7134655 complement(323078..323656) 1 NC_011761.1 identified by match to protein family HMM PF01713; Smr domain-containing protein 323656 7134655 AFE_0374 Acidithiobacillus ferrooxidans ATCC 23270 Smr domain-containing protein YP_002424877.1 323078 R 243159 CDS YP_002424878.1 218665937 7136568 complement(323660..324631) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 324631 trxB 7136568 trxB Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin-disulfide reductase YP_002424878.1 323660 R 243159 CDS YP_002424879.1 218668025 7134885 327167..327859 1 NC_011761.1 identified by similarity to SP:P39178; match to protein family HMM PF03548; match to protein family HMM TIGR00547; outer membrane lipoprotein carrier protein LolA 327859 7134885 AFE_0377 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane lipoprotein carrier protein LolA YP_002424879.1 327167 D 243159 CDS YP_002424880.1 218666275 7134790 327878..328948 1 NC_011761.1 identified by match to protein family HMM PF03349; outer membrane protein transport protein, OMPP1/FadL/TodX family 328948 7134790 AFE_0378 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane protein transport protein, OMPP1/FadL/TodX family YP_002424880.1 327878 D 243159 CDS YP_002424881.1 218667409 7136632 328976..330304 1 NC_011761.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01078; match to protein family HMM PF07728; AAA ATPase 330304 7136632 AFE_0379 Acidithiobacillus ferrooxidans ATCC 23270 AAA ATPase YP_002424881.1 328976 D 243159 CDS YP_002424882.1 218667554 7136933 330297..331562 1 NC_011761.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 331562 serS 7136933 serS Acidithiobacillus ferrooxidans ATCC 23270 seryl-tRNA synthetase YP_002424882.1 330297 D 243159 CDS YP_002424883.1 218666531 7136420 331566..331799 1 NC_011761.1 identified by similarity to GB:CAD84097.1; hypothetical protein 331799 7136420 AFE_0381 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424883.1 331566 D 243159 CDS YP_002424884.1 218665455 7136343 331796..332839 1 NC_011761.1 identified by match to protein family HMM PF01476; match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 332839 7136343 AFE_0382 Acidithiobacillus ferrooxidans ATCC 23270 ErfK/YbiS/YcfS/YnhG family protein YP_002424884.1 331796 D 243159 CDS YP_002424885.1 218665765 7134948 338414..338866 1 NC_011761.1 identified by similarity to SP:Q9HV53; match to protein family HMM PF02576; lipoprotein 338866 7134948 AFE_0389 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002424885.1 338414 D 243159 CDS YP_002424886.1 218667138 7136080 338898..340379 1 NC_011761.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF08529; match to protein family HMM TIGR01953; match to protein family HMM TIGR01954; transcription termination factor NusA 340379 nusA 7136080 nusA Acidithiobacillus ferrooxidans ATCC 23270 transcription termination factor NusA YP_002424886.1 338898 D 243159 CDS YP_002424887.1 218666901 7134685 340438..343065 1 NC_011761.1 identified by similarity to SP:P02995; match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM PF08364; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 343065 infB 7134685 infB Acidithiobacillus ferrooxidans ATCC 23270 translation initiation factor IF-2 YP_002424887.1 340438 D 243159 CDS YP_002424888.1 218666166 7134611 343073..343459 1 NC_011761.1 identified by match to protein family HMM PF02033; ribosome-binding factor A 343459 rbfA 7134611 rbfA Acidithiobacillus ferrooxidans ATCC 23270 ribosome-binding factor A YP_002424888.1 343073 D 243159 CDS YP_002424889.1 218665641 7134066 343456..344337 1 NC_011761.1 identified by similarity to SP:P09171; match to protein family HMM PF01509; match to protein family HMM PF09157; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 344337 truB 7134066 truB Acidithiobacillus ferrooxidans ATCC 23270 tRNA pseudouridine synthase B YP_002424889.1 343456 D 243159 CDS YP_002424890.1 218668118 7137124 344376..344645 1 NC_011761.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 344645 rpsO 7137124 rpsO Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S15 YP_002424890.1 344376 D 243159 CDS YP_002424891.1 218665115 7136855 344662..346734 1 NC_011761.1 identified by similarity to SP:P05055; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM PF07650; polyribonucleotide nucleotidyltransferase 346734 pnp 7136855 pnp Acidithiobacillus ferrooxidans ATCC 23270 polyribonucleotide nucleotidyltransferase YP_002424891.1 344662 D 243159 CDS YP_002424892.1 218666430 7134266 346789..348063 1 NC_011761.1 identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 348063 7134266 AFE_0396 Acidithiobacillus ferrooxidans ATCC 23270 M16 family peptidase YP_002424892.1 346789 D 243159 CDS YP_002424893.1 218667304 7134376 complement(348066..348818) 1 NC_011761.1 identified by similarity to SP:Q47677; match to protein family HMM PF00753; match to protein family HMM TIGR03413; hydroxyacylglutathione hydrolase 348818 7134376 AFE_0397 Acidithiobacillus ferrooxidans ATCC 23270 hydroxyacylglutathione hydrolase YP_002424893.1 348066 R 243159 CDS YP_002424894.1 218667707 7135148 348927..349724 1 NC_011761.1 identified by similarity to GB:CAD15216.1; hypothetical protein 349724 7135148 AFE_0398 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424894.1 348927 D 243159 CDS YP_002424895.1 218667538 7135490 349706..350182 1 NC_011761.1 identified by match to protein family HMM PF00075; ribonuclease HI 350182 rnhA-2 7135490 rnhA-2 Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease HI YP_002424895.1 349706 D 243159 CDS YP_002424896.1 218665705 7136404 350173..350919 1 NC_011761.1 identified by similarity to SP:P03007; match to protein family HMM PF00929; match to protein family HMM TIGR00573; match to protein family HMM TIGR01406; DNA polymerase III subunit epsilon 350919 dnaQ 7136404 dnaQ Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit epsilon YP_002424896.1 350173 D 243159 CDS YP_002424897.1 218666483 7137188 complement(350924..351334) 1 NC_011761.1 identified by match to protein family HMM PF03259; roadblock/LC7 domain-containing protein 351334 7137188 AFE_0401 Acidithiobacillus ferrooxidans ATCC 23270 roadblock/LC7 domain-containing protein YP_002424897.1 350924 R 243159 CDS YP_002424898.1 218667159 7136293 complement(351426..351833) 1 NC_011761.1 identified by match to protein family HMM PF00903; match to protein family HMM TIGR00068; lactoylglutathione lyase 351833 gloA 7136293 gloA Acidithiobacillus ferrooxidans ATCC 23270 lactoylglutathione lyase YP_002424898.1 351426 R 243159 CDS YP_002424899.1 218665742 7134707 complement(351844..352161) 1 NC_011761.1 identified by similarity to GB:AAN48171.1; hypothetical protein 352161 7134707 AFE_0403 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424899.1 351844 R 243159 CDS YP_002424900.1 218666840 7136057 complement(352166..353365) 1 NC_011761.1 identified by similarity to SP:Q9HY84; match to protein family HMM PF00764; match to protein family HMM TIGR00032; argininosuccinate synthase 353365 argG 7136057 argG Acidithiobacillus ferrooxidans ATCC 23270 argininosuccinate synthase YP_002424900.1 352166 R 243159 CDS YP_002424901.1 218667835 7137089 complement(353369..354304) 1 NC_011761.1 identified by similarity to SP:P18186; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase 354304 argF 7137089 argF Acidithiobacillus ferrooxidans ATCC 23270 ornithine carbamoyltransferase YP_002424901.1 353369 R 243159 CDS YP_002424902.1 218667734 7134913 complement(354301..355467) 1 NC_011761.1 identified by similarity to SP:P54752; match to protein family HMM PF00202; match to protein family HMM TIGR00707; acetylornithine aminotransferase 355467 argD 7134913 argD Acidithiobacillus ferrooxidans ATCC 23270 acetylornithine aminotransferase YP_002424902.1 354301 R 243159 CDS YP_002424903.1 218666311 7135517 complement(355467..356693) 1 NC_011761.1 identified by similarity to SP:P41403; match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00656; match to protein family HMM TIGR00657; aspartate kinase 356693 7135517 AFE_0407 Acidithiobacillus ferrooxidans ATCC 23270 aspartate kinase YP_002424903.1 355467 R 243159 CDS YP_002424904.1 218666782 7136449 complement(356801..357121) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 357121 7136449 AFE_0408 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424904.1 356801 R 243159 CDS YP_002424905.1 218665931 7137278 complement(357166..357651) 1 NC_011761.1 identified by similarity to GB:AAN79743.1; match to protein family HMM PF08238; hypothetical protein 357651 7137278 AFE_0409 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424905.1 357166 R 243159 CDS YP_002424906.1 218666122 7134141 complement(357635..357793) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 357793 7134141 AFE_0410 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424906.1 357635 R 243159 CDS YP_002424907.1 218665255 7134021 complement(357771..358016) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 358016 7134021 AFE_0411 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424907.1 357771 R 243159 CDS YP_002424908.1 218667770 7135744 complement(358052..358228) 1 NC_011761.1 identified by match to protein family HMM PF06769; match to protein family HMM TIGR02116; Txe/YoeB family addiction module toxin 358228 7135744 AFE_0412 Acidithiobacillus ferrooxidans ATCC 23270 Txe/YoeB family addiction module toxin YP_002424908.1 358052 R 243159 CDS YP_002424909.1 218666088 7134445 complement(358292..358669) 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 358669 7134445 AFE_0413 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002424909.1 358292 R 243159 CDS YP_002424910.1 218665317 7137009 complement(358675..358920) 1 NC_011761.1 identified by similarity to SP:Q06253; prevent host death protein 358920 7137009 AFE_0414 Acidithiobacillus ferrooxidans ATCC 23270 prevent host death protein YP_002424910.1 358675 R 243159 CDS YP_002424911.1 218667555 7136258 359224..359421 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 359421 7136258 AFE_0415 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424911.1 359224 D 243159 CDS YP_002424912.1 218666555 7136421 359479..360015 1 NC_011761.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; pilin 360015 7136421 AFE_0416 Acidithiobacillus ferrooxidans ATCC 23270 pilin YP_002424912.1 359479 D 243159 CDS YP_002424913.1 218666579 7135285 360329..360574 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 360574 7135285 AFE_0417 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424913.1 360329 D 243159 CDS YP_002424914.1 218665681 7135309 360588..360803 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 360803 7135309 AFE_0418 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424914.1 360588 D 243159 CDS YP_002424915.1 218667959 7137164 360910..362001 1 NC_011761.1 identified by match to protein family HMM PF00923; match to protein family HMM TIGR00876; transaldolase 362001 tal 7137164 tal Acidithiobacillus ferrooxidans ATCC 23270 transaldolase YP_002424915.1 360910 D 243159 CDS YP_002424916.1 218665688 7135266 complement(362035..362808) 1 NC_011761.1 identified by similarity to SP:P29132; match to protein family HMM PF00106; enoyl-(acyl-carrier-protein) reductase 362808 fabI 7135266 fabI Acidithiobacillus ferrooxidans ATCC 23270 enoyl-(acyl-carrier-protein) reductase YP_002424916.1 362035 R 243159 CDS YP_002424917.1 218666767 7137171 complement(362833..364671) 1 NC_011761.1 identified by similarity to SP:P23931; match to protein family HMM PF01464; match to protein family HMM PF01476; membrane-bound lytic murein transglycosylase D 364671 mltD 7137171 mltD Acidithiobacillus ferrooxidans ATCC 23270 membrane-bound lytic murein transglycosylase D YP_002424917.1 362833 R 243159 CDS YP_002424918.1 218667373 7137263 364896..366296 1 NC_011761.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 366296 gltX 7137263 gltX Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA synthetase YP_002424918.1 364896 D 243159 CDS YP_002424919.1 218665349 7136895 366408..368345 1 NC_011761.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 368345 7136895 AFE_0423 Acidithiobacillus ferrooxidans ATCC 23270 aconitate hydratase YP_002424919.1 366408 D 243159 CDS YP_002424920.1 218668157 7136130 368348..369634 1 NC_011761.1 identified by match to protein family HMM PF00180; match to protein family HMM TIGR00183; isocitrate dehydrogenase 369634 icd 7136130 icd Acidithiobacillus ferrooxidans ATCC 23270 isocitrate dehydrogenase YP_002424920.1 368348 D 243159 CDS YP_002424921.1 218665538 7135976 369644..370807 1 NC_011761.1 identified by similarity to SP:P07460; match to protein family HMM PF00549; match to protein family HMM PF08442; match to protein family HMM TIGR01016; succinyl-CoA synthetase subunit beta 370807 sucC 7135976 sucC Acidithiobacillus ferrooxidans ATCC 23270 succinyl-CoA synthetase subunit beta YP_002424921.1 369644 D 243159 CDS YP_002424922.1 218665272 7135910 370809..371153 1 NC_011761.1 hypothetical protein 371153 7135910 AFE_0426 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424922.1 370809 D 243159 CDS YP_002424923.1 218666152 7136213 371150..372022 1 NC_011761.1 identified by similarity to SP:P07459; match to protein family HMM PF00549; match to protein family HMM PF02629; match to protein family HMM TIGR01019; succinyl-CoA synthetase subunit alpha 372022 sucD 7136213 sucD Acidithiobacillus ferrooxidans ATCC 23270 succinyl-CoA synthetase subunit alpha YP_002424923.1 371150 D 243159 CDS YP_002424924.1 218667784 7134052 372022..373671 1 NC_011761.1 identified by similarity to SP:Q03638; match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; glutamine-dependent NAD+ synthetase 373671 nadE 7134052 nadE Acidithiobacillus ferrooxidans ATCC 23270 glutamine-dependent NAD+ synthetase YP_002424924.1 372022 D 243159 CDS YP_002424925.1 218665514 7134459 373668..374006 1 NC_011761.1 identified by similarity to SP:P05826; match to protein family HMM PF00543; nitrogen regulatory protein P-II 1 374006 glnB-2 7134459 glnB-2 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulatory protein P-II 1 YP_002424925.1 373668 D 243159 CDS YP_002424926.1 218666506 7135885 complement(374040..374795) 1 NC_011761.1 identified by similarity to SP:Q50985; match to protein family HMM PF00515; match to protein family HMM TIGR03302; competence lipoprotein ComL 374795 7135885 AFE_0430 Acidithiobacillus ferrooxidans ATCC 23270 competence lipoprotein ComL YP_002424926.1 374040 R 243159 CDS YP_002424927.1 218667498 7136318 374824..375783 1 NC_011761.1 identified by similarity to SP:P33643; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase D 375783 rluD 7136318 rluD Acidithiobacillus ferrooxidans ATCC 23270 ribosomal large subunit pseudouridine synthase D YP_002424927.1 374824 D 243159 CDS YP_002424928.1 218665280 7136363 375800..376525 1 NC_011761.1 identified by similarity to GB:AAQ59864.1; match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 376525 7136363 AFE_0432 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424928.1 375800 D 243159 CDS YP_002424929.1 218667020 7136221 376527..377075 1 NC_011761.1 identified by match to protein family HMM PF03079; match to protein family HMM PF07883; dioxygenase, ARD/ARD' family 377075 7136221 AFE_0433 Acidithiobacillus ferrooxidans ATCC 23270 dioxygenase, ARD/ARD' family YP_002424929.1 376527 D 243159 CDS YP_002424930.1 218667922 7134884 377072..378244 1 NC_011761.1 identified by match to protein family HMM PF00016; ribulose bisphosphate carboxylase, large subunit 2 378244 ccbL2 7134884 ccbL2 Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisphosphate carboxylase, large subunit 2 YP_002424930.1 377072 D 243159 CDS YP_002424931.1 218665398 7135229 378244..378897 1 NC_011761.1 identified by match to protein family HMM PF00702; HAD superfamily hydrolase 378897 7135229 AFE_0435 Acidithiobacillus ferrooxidans ATCC 23270 HAD superfamily hydrolase YP_002424931.1 378244 D 243159 CDS YP_002424932.1 218666426 7136180 378887..379507 1 NC_011761.1 identified by match to protein family HMM PF00596; match to protein family HMM TIGR03328; aldolase, class II 379507 7136180 AFE_0436 Acidithiobacillus ferrooxidans ATCC 23270 aldolase, class II YP_002424932.1 378887 D 243159 CDS YP_002424933.1 218667892 7134372 379509..380030 1 NC_011761.1 identified by match to protein family HMM PF01842; ACT domain-containing protein 380030 7134372 AFE_0437 Acidithiobacillus ferrooxidans ATCC 23270 ACT domain-containing protein YP_002424933.1 379509 D 243159 CDS YP_002424934.1 218666795 7135199 380030..380533 1 NC_011761.1 identified by similarity to SP:P27251; match to protein family HMM PF01327; match to protein family HMM TIGR00079; polypeptide deformylase 380533 def-1 7135199 def-1 Acidithiobacillus ferrooxidans ATCC 23270 polypeptide deformylase YP_002424934.1 380030 D 243159 CDS YP_002424935.1 218665817 7137044 complement(380607..382193) 1 NC_011761.1 identified by match to protein family HMM PF00324; amino acid permease family protein 382193 7137044 AFE_0439 Acidithiobacillus ferrooxidans ATCC 23270 amino acid permease family protein YP_002424935.1 380607 R 243159 CDS YP_002424936.1 218665556 7135371 complement(382178..382294) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 382294 7135371 AFE_0440 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424936.1 382178 R 243159 CDS YP_002424937.1 218667293 7135928 complement(382357..383496) 1 NC_011761.1 identified by similarity to SP:P55295; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 383496 rfbB 7135928 rfbB Acidithiobacillus ferrooxidans ATCC 23270 dTDP-glucose 4,6-dehydratase YP_002424937.1 382357 R 243159 CDS YP_002424938.1 218665614 7135137 complement(383516..384385) 1 NC_011761.1 identified by similarity to GB:AAO88915.1; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase 384385 rfbD 7135137 rfbD Acidithiobacillus ferrooxidans ATCC 23270 dTDP-4-dehydrorhamnose reductase YP_002424938.1 383516 R 243159 CDS YP_002424939.1 218668088 7135557 complement(384415..384921) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 384921 7135557 AFE_0443 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424939.1 384415 R 243159 CDS YP_002424940.1 218667260 7136824 complement(384921..385253) 1 NC_011761.1 identified by similarity to GB:AAQ59662.1; hypothetical protein 385253 7136824 AFE_0444 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424940.1 384921 R 243159 CDS YP_002424941.1 218667230 7135654 complement(385318..386214) 1 NC_011761.1 identified by similarity to SP:Q05852; match to protein family HMM PF00483; match to protein family HMM TIGR01099; UTP-glucose-1-phosphate uridylyltransferase 386214 galU 7135654 galU Acidithiobacillus ferrooxidans ATCC 23270 UTP-glucose-1-phosphate uridylyltransferase YP_002424941.1 385318 R 243159 CDS YP_002424942.1 218667438 7135624 complement(386292..386987) 1 NC_011761.1 identified by similarity to GB:AAO91056.1; hypothetical protein 386987 7135624 AFE_0446 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424942.1 386292 R 243159 CDS YP_002424943.1 218668014 7136728 complement(387060..388445) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF07728; sigma-54 dependent DNA-binding response regulator 388445 7136728 AFE_0447 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent DNA-binding response regulator YP_002424943.1 387060 R 243159 CDS YP_002424944.1 218665836 7134779 complement(388447..388953) 1 NC_011761.1 lipoprotein 388953 7134779 AFE_0448 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002424944.1 388447 R 243159 CDS YP_002424945.1 218667905 7135390 complement(388953..390437) 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 390437 7135390 AFE_0449 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002424945.1 388953 R 243159 CDS YP_002424946.1 218667121 7135212 complement(390600..392276) 1 NC_011761.1 identified by similarity to SP:P05824; match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 392276 recN 7135212 recN Acidithiobacillus ferrooxidans ATCC 23270 DNA repair protein RecN YP_002424946.1 390600 R 243159 CDS YP_002424947.1 218666029 7134667 complement(392276..393163) 1 NC_011761.1 identified by match to protein family HMM PF01513; ATP-NAD kinase 393163 ppnK 7134667 ppnK Acidithiobacillus ferrooxidans ATCC 23270 ATP-NAD kinase YP_002424947.1 392276 R 243159 CDS YP_002424948.1 218666733 7134245 complement(393243..393968) 1 NC_011761.1 identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; Baf family transcriptional activator 393968 7134245 AFE_0452 Acidithiobacillus ferrooxidans ATCC 23270 Baf family transcriptional activator YP_002424948.1 393243 R 243159 CDS YP_002424949.1 218666243 7137228 complement(393965..394870) 1 NC_011761.1 identified by match to protein family HMM PF02237; match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin-(acetyl-CoA carboxylase) ligase 394870 birA 7137228 birA Acidithiobacillus ferrooxidans ATCC 23270 biotin-(acetyl-CoA carboxylase) ligase YP_002424949.1 393965 R 243159 CDS YP_002424950.1 218668098 7136600 complement(394887..396143) 1 NC_011761.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 396143 proA 7136600 proA Acidithiobacillus ferrooxidans ATCC 23270 gamma-glutamyl phosphate reductase YP_002424950.1 394887 R 243159 CDS YP_002424951.1 218667267 7136834 396206..396340 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 396340 7136834 AFE_0456 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424951.1 396206 D 243159 CDS YP_002424952.1 218666420 7135662 complement(396310..397494) 1 NC_011761.1 identified by match to protein family HMM PF07690; hypothetical protein 397494 7135662 AFE_0455 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424952.1 396310 R 243159 CDS YP_002424953.1 218666035 7134366 complement(397555..398547) 1 NC_011761.1 identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 398547 holA 7134366 holA Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit delta YP_002424953.1 397555 R 243159 CDS YP_002424954.1 218666981 7136955 complement(398549..399067) 1 NC_011761.1 identified by similarity to SP:P10101; rare lipoprotein B 399067 7136955 AFE_0458 Acidithiobacillus ferrooxidans ATCC 23270 rare lipoprotein B YP_002424954.1 398549 R 243159 CDS YP_002424955.1 218667702 7134844 complement(399064..401529) 1 NC_011761.1 identified by similarity to SP:P07813; match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 401529 leuS 7134844 leuS Acidithiobacillus ferrooxidans ATCC 23270 leucyl-tRNA synthetase YP_002424955.1 399064 R 243159 CDS YP_002424956.1 218666582 7135485 401786..402388 1 NC_011761.1 stationary phase that binds TrpR repressor; TrpR binding protein WrbA 402388 wrbA 7135485 wrbA Acidithiobacillus ferrooxidans ATCC 23270 TrpR binding protein WrbA YP_002424956.1 401786 D 243159 CDS YP_002424957.1 218668081 7135312 402405..403046 1 NC_011761.1 identified by match to protein family HMM PF04264; hypothetical protein 403046 7135312 AFE_0461 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424957.1 402405 D 243159 CDS YP_002424958.1 218665943 7136817 403117..403908 1 NC_011761.1 identified by similarity to SP:P77790; match to protein family HMM PF01427; D-alanyl-D-alanine dipeptidase 403908 7136817 AFE_0462 Acidithiobacillus ferrooxidans ATCC 23270 D-alanyl-D-alanine dipeptidase YP_002424958.1 403117 D 243159 CDS YP_002424959.1 218667882 7134153 403957..404760 1 NC_011761.1 identified by match to protein family HMM PF06831; formamidopyrimidine-DNA glycosylase 404760 7134153 AFE_0463 Acidithiobacillus ferrooxidans ATCC 23270 formamidopyrimidine-DNA glycosylase YP_002424959.1 403957 D 243159 CDS YP_002424960.1 218665377 7136541 404769..405281 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 405281 7136541 AFE_0464 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424960.1 404769 D 243159 CDS YP_002424961.1 218665724 7136159 405436..406611 1 NC_011761.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation efflux family protein 406611 7136159 AFE_0465 Acidithiobacillus ferrooxidans ATCC 23270 cation efflux family protein YP_002424961.1 405436 D 243159 CDS YP_002424962.1 218666065 7136039 406766..408181 1 NC_011761.1 identified by similarity to SP:P06711; match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 408181 glnA 7136039 glnA Acidithiobacillus ferrooxidans ATCC 23270 glutamine synthetase, type I YP_002424962.1 406766 D 243159 CDS YP_002424963.1 218666583 7136985 408385..408897 1 NC_011761.1 identified by similarity to GB:AAQ61252.1; hypothetical protein 408897 7136985 AFE_0467 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424963.1 408385 D 243159 CDS YP_002424964.1 218667610 7135313 408996..409748 1 NC_011761.1 identified by similarity to SP:P36664; match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE 409748 surE 7135313 surE Acidithiobacillus ferrooxidans ATCC 23270 acid phosphatase SurE YP_002424964.1 408996 D 243159 CDS YP_002424965.1 218665372 7135784 409730..410455 1 NC_011761.1 identified by similarity to SP:P24206; match to protein family HMM PF01135; match to protein family HMM TIGR00080; protein-L-isoaspartate O-methyltransferase 410455 pcm-2 7135784 pcm-2 Acidithiobacillus ferrooxidans ATCC 23270 protein-L-isoaspartate O-methyltransferase YP_002424965.1 409730 D 243159 CDS YP_002424966.1 218666687 7136154 410427..411380 1 NC_011761.1 identified by similarity to SP:P13445; match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-38 factor 411380 rpoS 7136154 rpoS Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigma-38 factor YP_002424966.1 410427 D 243159 CDS YP_002424967.1 218667404 7134558 complement(411403..411777) 1 NC_011761.1 identified by similarity to GB:CAD86279.1; match to protein family HMM PF04430; hypothetical protein 411777 7134558 AFE_0471 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424967.1 411403 R 243159 CDS YP_002424968.1 218665753 7136928 411872..413053 1 NC_011761.1 identified by similarity to GB:AAO58485.1; match to protein family HMM PF00155; class I/II aminotransferase 413053 7136928 AFE_0472 Acidithiobacillus ferrooxidans ATCC 23270 class I/II aminotransferase YP_002424968.1 411872 D 243159 CDS YP_002424969.1 218666546 7136068 413065..414375 1 NC_011761.1 identified by similarity to SP:P08499; match to protein family HMM PF00742; match to protein family HMM PF01113; match to protein family HMM PF01842; match to protein family HMM PF03447; homoserine dehydrogenase 414375 metM 7136068 metM Acidithiobacillus ferrooxidans ATCC 23270 homoserine dehydrogenase YP_002424969.1 413065 D 243159 CDS YP_002424970.1 218667183 7136358 414427..415557 1 NC_011761.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 415557 thrC 7136358 thrC Acidithiobacillus ferrooxidans ATCC 23270 threonine synthase YP_002424970.1 414427 D 243159 CDS YP_002424971.1 218665491 7134732 415557..416522 1 NC_011761.1 identified by similarity to GB:AAQ60147.1; hypothetical protein 416522 7134732 AFE_0475 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424971.1 415557 D 243159 CDS YP_002424972.1 218665215 7135104 416523..418340 1 NC_011761.1 identified by similarity to SP:P21893; match to protein family HMM PF01368; single-stranded-DNA-specific exonuclease RecJ 418340 recJ 7135104 recJ Acidithiobacillus ferrooxidans ATCC 23270 single-stranded-DNA-specific exonuclease RecJ YP_002424972.1 416523 D 243159 CDS YP_002424973.1 218665855 7135703 418549..418779 1 NC_011761.1 identified by similarity to SP:Q05459; match to protein family HMM PF04014; virulence protein 418779 7135703 AFE_0477 Acidithiobacillus ferrooxidans ATCC 23270 virulence protein YP_002424973.1 418549 D 243159 CDS YP_002424974.1 218667984 7135410 418785..419189 1 NC_011761.1 identified by similarity to PIR:B49205; match to protein family HMM PF01850; match to protein family HMM PF07647; virulence-associated protein 419189 7135410 AFE_0478 Acidithiobacillus ferrooxidans ATCC 23270 virulence-associated protein YP_002424974.1 418785 D 243159 CDS YP_002424975.1 218666919 7134748 join(419322..419396,419398..420420) 1 NC_011761.1 Translation involves an autoregulatory +1 programmed frameshift at a TGA codon near the N-terminus; identified by similarity to SP:P28353; match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2, programmed frameshift 420420 prfB 7134748 prfB Acidithiobacillus ferrooxidans ATCC 23270 peptide chain release factor 2, programmed frameshift YP_002424975.1 419322 D 243159 CDS YP_002424976.1 218665818 7134629 420457..421947 1 NC_011761.1 identified by similarity to SP:P14825; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysyl-tRNA synthetase 421947 lysS 7134629 lysS Acidithiobacillus ferrooxidans ATCC 23270 lysyl-tRNA synthetase YP_002424976.1 420457 D 243159 CDS YP_002424977.1 218667228 7135372 421944..423188 1 NC_011761.1 identified by similarity to SP:P75956; match to protein family HMM PF02687; match to protein family HMM TIGR02212; lipoprotein releasing system transmembrane protein LolC 423188 lolC 7135372 lolC Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein releasing system transmembrane protein LolC YP_002424977.1 421944 D 243159 CDS YP_002424978.1 218667961 7135622 423181..423876 1 NC_011761.1 identified by similarity to SP:P75957; match to protein family HMM PF00005; lipoprotein releasing system, ATP-binding protein LolD 423876 lolD 7135622 lolD Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein releasing system, ATP-binding protein LolD YP_002424978.1 423181 D 243159 CDS YP_002424979.1 218666406 7135268 complement(423873..424433) 1 NC_011761.1 identified by similarity to PIR:B83271; hypothetical protein 424433 7135268 AFE_0482 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424979.1 423873 R 243159 CDS YP_002424980.1 218667263 7134350 424418..426628 1 NC_011761.1 identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; DNA internalization-related competence protein ComEC/Rec2 426628 7134350 AFE_0484 Acidithiobacillus ferrooxidans ATCC 23270 DNA internalization-related competence protein ComEC/Rec2 YP_002424980.1 424418 D 243159 CDS YP_002424981.1 218667894 7135658 426721..427341 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 427341 7135658 AFE_0485 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002424981.1 426721 D 243159 CDS YP_002424982.1 218665638 7135201 427338..427742 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 427742 7135201 AFE_0486 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002424982.1 427338 D 243159 CDS YP_002424983.1 218665083 7137121 427851..428432 1 NC_011761.1 identified by similarity to PIR:F64553; match to protein family HMM PF04028; hypothetical protein 428432 7137121 AFE_0487 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424983.1 427851 D 243159 CDS YP_002424984.1 218667608 7135013 428429..429574 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 429574 7135013 AFE_0488 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424984.1 428429 D 243159 CDS YP_002424985.1 218666200 7135782 429571..430569 1 NC_011761.1 identified by match to protein family HMM PF02606; match to protein family HMM TIGR00682; tetraacyldisaccharide 4'-kinase 430569 lpxK 7135782 lpxK Acidithiobacillus ferrooxidans ATCC 23270 tetraacyldisaccharide 4'-kinase YP_002424985.1 429571 D 243159 CDS YP_002424986.1 218666425 7136556 430569..430751 1 NC_011761.1 identified by similarity to GB:CAD16238.1; match to protein family HMM PF03966; hypothetical protein 430751 7136556 AFE_0490 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424986.1 430569 D 243159 CDS YP_002424987.1 218666678 7134371 430748..431509 1 NC_011761.1 identified by match to protein family HMM PF02348; match to protein family HMM TIGR00466; 3-deoxy-D-manno-octulosonate cytidylyltransferase 431509 kdsB 7134371 kdsB Acidithiobacillus ferrooxidans ATCC 23270 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_002424987.1 430748 D 243159 CDS YP_002424988.1 218665808 7134549 431531..432052 1 NC_011761.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 432052 ppa 7134549 ppa Acidithiobacillus ferrooxidans ATCC 23270 inorganic pyrophosphatase YP_002424988.1 431531 D 243159 CDS YP_002424989.1 218668032 7135362 432117..432497 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 432497 7135362 AFE_0493 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424989.1 432117 D 243159 CDS YP_002424990.1 218667674 7135074 433554..433781 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 433781 7135074 AFE_0495 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424990.1 433554 D 243159 CDS YP_002424991.1 218667255 7135457 433901..434497 1 NC_011761.1 transferase 434497 7135457 AFE_0496 Acidithiobacillus ferrooxidans ATCC 23270 transferase YP_002424991.1 433901 D 243159 CDS YP_002424992.1 218667336 7135525 435706..436143 1 NC_011761.1 identified by similarity to GB:BAC72705.1; match to protein family HMM PF07366; hypothetical protein 436143 7135525 AFE_0498 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424992.1 435706 D 243159 CDS YP_002424993.1 218668000 7135181 436230..437363 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 437363 7135181 AFE_0499 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424993.1 436230 D 243159 CDS YP_002424994.1 218665245 7134764 437450..437863 1 NC_011761.1 identified by similarity to GB:AAQ58729.1; match to protein family HMM PF04828; hypothetical protein 437863 7134764 AFE_0500 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424994.1 437450 D 243159 CDS YP_002424995.1 218665379 7135734 437940..438293 1 NC_011761.1 identified by similarity to GB:AAQ57956.1; hypothetical protein 438293 7135734 AFE_0501 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424995.1 437940 D 243159 CDS YP_002424996.1 218666104 7136161 438369..438794 1 NC_011761.1 identified by similarity to GB:CAD17748.1; match to protein family HMM PF06983; hypothetical protein 438794 7136161 AFE_0502 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424996.1 438369 D 243159 CDS YP_002424997.1 218667359 7137025 439305..439445 1 NC_011761.1 identified by similarity to PIR:T44273; hypothetical protein 439445 7137025 AFE_0503 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424997.1 439305 D 243159 CDS YP_002424998.1 218667489 7136881 439534..440082 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 440082 7136881 AFE_0505 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424998.1 439534 D 243159 CDS YP_002424999.1 218665464 7136782 complement(440054..440242) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 440242 7136782 AFE_0504 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002424999.1 440054 R 243159 CDS YP_002425000.1 218667158 7135077 440216..441076 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 441076 7135077 AFE_0506 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425000.1 440216 D 243159 CDS YP_002425001.1 218665405 7134706 441199..442443 1 NC_011761.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase, phage integrase family 442443 7134706 AFE_0507 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425001.1 441199 D 243159 CDS YP_002425002.1 218666072 7136187 442440..443381 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 443381 7136187 AFE_0508 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425002.1 442440 D 243159 CDS YP_002425003.1 218666115 7136992 443374..444372 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 444372 7136992 AFE_0509 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425003.1 443374 D 243159 CDS YP_002425004.1 218665240 7134014 444547..445074 1 NC_011761.1 transposase, degenerate 445074 7134014 AFE_0510 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002425004.1 444547 D 243159 CDS YP_002425005.1 218667471 7135198 445928..446131 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 446131 7135198 AFE_0512 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425005.1 445928 D 243159 CDS YP_002425006.1 218665456 7136763 446517..446723 1 NC_011761.1 identified by similarity to GB:AAM71824.1; hypothetical protein 446723 7136763 AFE_0513 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425006.1 446517 D 243159 CDS YP_002425007.1 218665166 7135068 446705..446824 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 446824 7135068 AFE_0514 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425007.1 446705 D 243159 CDS YP_002425008.1 218667564 7134318 447712..447924 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 447924 7134318 AFE_0515 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425008.1 447712 D 243159 CDS YP_002425009.1 218665457 7136430 complement(448001..448267) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 448267 7136430 AFE_0516 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425009.1 448001 R 243159 CDS YP_002425010.1 218667930 7135069 448643..449236 1 NC_011761.1 identified by match to protein family HMM PF03167; hypothetical protein 449236 7135069 AFE_0518 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425010.1 448643 D 243159 CDS YP_002425011.1 218666283 7135237 complement(449303..450778) 1 NC_011761.1 identified by similarity to SP:Q92RB2; match to protein family HMM PF02696; hypothetical protein 450778 7135237 AFE_0519 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425011.1 449303 R 243159 CDS YP_002425012.1 218666632 7137291 complement(450782..453040) 1 NC_011761.1 identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease, ATP-binding subunit ClpA 453040 clpA 7137291 clpA Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent Clp protease, ATP-binding subunit ClpA YP_002425012.1 450782 R 243159 CDS YP_002425013.1 218668114 7134503 complement(453044..453388) 1 NC_011761.1 identified by similarity to SP:Q8UFN4; match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS 453388 7134503 AFE_0521 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent Clp protease adaptor protein ClpS YP_002425013.1 453044 R 243159 CDS YP_002425014.1 218665858 7136851 complement(453529..454305) 1 NC_011761.1 identified by similarity to GB:CAE35777.1; match to protein family HMM PF00639; PPIC-type peptidyl-prolyl cis-trans isomerase 454305 7136851 AFE_0522 Acidithiobacillus ferrooxidans ATCC 23270 PPIC-type peptidyl-prolyl cis-trans isomerase YP_002425014.1 453529 R 243159 CDS YP_002425015.1 218667510 7135413 complement(454321..454932) 1 NC_011761.1 identified by similarity to SP:Q46948; match to protein family HMM PF01965; match to protein family HMM TIGR01383; 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein 454932 thiJ 7135413 thiJ Acidithiobacillus ferrooxidans ATCC 23270 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein YP_002425015.1 454321 R 243159 CDS YP_002425016.1 218666416 7136375 complement(455070..456518) 1 NC_011761.1 identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; carboxy-terminal peptidase 456518 ctpA 7136375 ctpA Acidithiobacillus ferrooxidans ATCC 23270 carboxy-terminal peptidase YP_002425016.1 455070 R 243159 CDS YP_002425017.1 218665032 7134362 complement(456582..458000) 1 NC_011761.1 identified by match to protein family HMM PF01551; M23/M37 peptidase domain-containing protein 458000 7134362 AFE_0525 Acidithiobacillus ferrooxidans ATCC 23270 M23/M37 peptidase domain-containing protein YP_002425017.1 456582 R 243159 CDS YP_002425018.1 218665585 7134961 complement(458004..459533) 1 NC_011761.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 459533 gpmI-2 7134961 gpmI-2 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglyceromutase YP_002425018.1 458004 R 243159 CDS YP_002425019.1 218667801 7135527 complement(459601..462087) 1 NC_011761.1 identified by match to protein family HMM PF00343; match to protein family HMM TIGR02093; glycogen/starch/alpha-glucan phosphorylase 462087 7135527 AFE_0527 Acidithiobacillus ferrooxidans ATCC 23270 glycogen/starch/alpha-glucan phosphorylase YP_002425019.1 459601 R 243159 CDS YP_002425020.1 218667421 7134476 462232..462681 1 NC_011761.1 identified by similarity to GB:AAN50762.1; hypothetical protein 462681 7134476 AFE_0528 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425020.1 462232 D 243159 CDS YP_002425021.1 218665695 7136945 462715..463101 1 NC_011761.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 463101 7136945 AFE_0529 Acidithiobacillus ferrooxidans ATCC 23270 rhodanese-like domain-containing protein YP_002425021.1 462715 D 243159 CDS YP_002425022.1 218666529 7137178 complement(463114..464055) 1 NC_011761.1 identified by match to protein family HMM PF00294; carbohydrate kinase, PfkB family 464055 7137178 AFE_0530 Acidithiobacillus ferrooxidans ATCC 23270 carbohydrate kinase, PfkB family YP_002425022.1 463114 R 243159 CDS YP_002425023.1 218667931 7136341 464176..464781 1 NC_011761.1 identified by similarity to GB:AAK57731.1; hypothetical protein 464781 7136341 AFE_0531 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425023.1 464176 D 243159 CDS YP_002425024.1 218667182 7135238 464925..466094 1 NC_011761.1 identified by similarity to SP:P04384; match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; S-adenosylmethionine synthetase 466094 metK 7135238 metK Acidithiobacillus ferrooxidans ATCC 23270 S-adenosylmethionine synthetase YP_002425024.1 464925 D 243159 CDS YP_002425025.1 218668160 7134731 466181..466276 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 466276 7134731 AFE_0533 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425025.1 466181 D 243159 CDS YP_002425026.1 218665914 7135979 466291..467688 1 NC_011761.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 467688 ahcY 7135979 ahcY Acidithiobacillus ferrooxidans ATCC 23270 S-adenosyl-L-homocysteine hydrolase YP_002425026.1 466291 D 243159 CDS YP_002425027.1 218665202 7134124 467688..468506 1 NC_011761.1 identified by similarity to SP:P00394; match to protein family HMM PF02219; match to protein family HMM TIGR00676; 5,10-methylenetetrahydrofolate reductase 468506 metF 7134124 metF Acidithiobacillus ferrooxidans ATCC 23270 5,10-methylenetetrahydrofolate reductase YP_002425027.1 467688 D 243159 CDS YP_002425028.1 218665874 7135690 468611..469483 1 NC_011761.1 identified by similarity to SP:P12033; match to protein family HMM PF00485; phosphoribulokinase 469483 cbbP 7135690 cbbP Acidithiobacillus ferrooxidans ATCC 23270 phosphoribulokinase YP_002425028.1 468611 D 243159 CDS YP_002425029.1 218666444 7135429 469416..470297 1 NC_011761.1 identified by match to protein family HMM PF01569; PAP2 family protein 470297 7135429 AFE_0537 Acidithiobacillus ferrooxidans ATCC 23270 PAP2 family protein YP_002425029.1 469416 D 243159 CDS YP_002425030.1 218666549 7134390 complement(470323..471849) 1 NC_011761.1 identified by match to protein family HMM PF05670; hypothetical protein 471849 7134390 AFE_0538 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425030.1 470323 R 243159 CDS YP_002425031.1 218667947 7135279 complement(471885..473558) 1 NC_011761.1 identified by match to protein family HMM PF01583; match to protein family HMM PF01747; match to protein family HMM TIGR00455; sulfate adenylyltransferase 473558 7135279 AFE_0539 Acidithiobacillus ferrooxidans ATCC 23270 sulfate adenylyltransferase YP_002425031.1 471885 R 243159 CDS YP_002425032.1 218666990 7135254 complement(473569..474138) 1 NC_011761.1 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis; adenine phosphoribosyltransferase 474138 7135254 AFE_0540 Acidithiobacillus ferrooxidans ATCC 23270 adenine phosphoribosyltransferase YP_002425032.1 473569 R 243159 CDS YP_002425033.1 218667973 7134853 474197..474328 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 474328 7134853 AFE_0541 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425033.1 474197 D 243159 CDS YP_002425034.1 218667216 7134737 complement(474399..476054) 1 NC_011761.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 476054 groEL 7134737 groEL Acidithiobacillus ferrooxidans ATCC 23270 chaperonin GroEL YP_002425034.1 474399 R 243159 CDS YP_002425035.1 218665198 7135610 complement(476101..476391) 1 NC_011761.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 476391 groES 7135610 groES Acidithiobacillus ferrooxidans ATCC 23270 co-chaperonin GroES YP_002425035.1 476101 R 243159 CDS YP_002425036.1 218666303 7135685 complement(476519..477349) 1 NC_011761.1 identified by similarity to PIR:AG2426; hypothetical protein 477349 7135685 AFE_0544 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425036.1 476519 R 243159 CDS YP_002425037.1 218667063 7137311 477663..479513 1 NC_011761.1 identified by similarity to SP:P36655; match to protein family HMM PF02683; thiol:disulfide interchange protein DsbD 479513 dsbD 7137311 dsbD Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange protein DsbD YP_002425037.1 477663 D 243159 CDS YP_002425038.1 218667955 7136663 complement(479533..479745) 1 NC_011761.1 identified by similarity to GB:AAO91158.1; hypothetical protein 479745 7136663 AFE_0546 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425038.1 479533 R 243159 CDS YP_002425039.1 218666695 7135262 complement(479750..480673) 1 NC_011761.1 identified by match to protein family HMM PF01063; match to protein family HMM TIGR01122; branched-chain amino acid aminotransferase 480673 ilvE 7135262 ilvE Acidithiobacillus ferrooxidans ATCC 23270 branched-chain amino acid aminotransferase YP_002425039.1 479750 R 243159 CDS YP_002425040.1 218666543 7134566 complement(480686..483550) 1 NC_011761.1 identified by similarity to SP:P30870; match to protein family HMM PF03710; glutamate-ammonia-ligase adenylyltransferase 483550 glnE 7134566 glnE Acidithiobacillus ferrooxidans ATCC 23270 glutamate-ammonia-ligase adenylyltransferase YP_002425040.1 480686 R 243159 CDS YP_002425041.1 218667508 7136355 483763..487395 1 NC_011761.1 identified by similarity to PIR:E82325; hypothetical protein 487395 7136355 AFE_0549 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425041.1 483763 D 243159 CDS YP_002425042.1 218666028 7136373 complement(487465..488691) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 488691 7136373 AFE_0550 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002425042.1 487465 R 243159 CDS YP_002425043.1 218665355 7134244 489001..489849 1 NC_011761.1 identified by match to protein family HMM PF00795; hydrolase 489849 7134244 AFE_0551 Acidithiobacillus ferrooxidans ATCC 23270 hydrolase YP_002425043.1 489001 D 243159 CDS YP_002425044.1 218667838 7136137 490047..491810 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF05992; match to protein family HMM PF06472; ABC transporter permease/ATP-binding protein 491810 7136137 AFE_0552 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease/ATP-binding protein YP_002425044.1 490047 D 243159 CDS YP_002425045.1 218665932 7134916 491832..492407 1 NC_011761.1 identified by similarity to GB:CAD76995.1; match to protein family HMM PF00578; match to protein family HMM PF08534; hypothetical protein 492407 7134916 AFE_0553 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425045.1 491832 D 243159 CDS YP_002425046.1 218667217 7134142 complement(492431..492649) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 492649 7134142 AFE_0554 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425046.1 492431 R 243159 CDS YP_002425047.1 218665135 7135611 complement(492899..493357) 1 NC_011761.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 493357 lspA 7135611 lspA Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein signal peptidase YP_002425047.1 492899 R 243159 CDS YP_002425048.1 218667361 7134286 complement(493357..496170) 1 NC_011761.1 identified by similarity to SP:P00956; match to protein family HMM PF00133; match to protein family HMM PF06827; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucyl-tRNA synthetase 496170 ileS 7134286 ileS Acidithiobacillus ferrooxidans ATCC 23270 isoleucyl-tRNA synthetase YP_002425048.1 493357 R 243159 CDS YP_002425049.1 218668108 7136883 complement(496173..497105) 1 NC_011761.1 identified by similarity to SP:P08391; match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 497105 ribF 7136883 ribF Acidithiobacillus ferrooxidans ATCC 23270 riboflavin biosynthesis protein RibF YP_002425049.1 496173 R 243159 CDS YP_002425050.1 218667167 7136845 complement(497204..497590) 1 NC_011761.1 identified by similarity to GB:AAN47976.1; hypothetical protein 497590 7136845 AFE_0558 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425050.1 497204 R 243159 CDS YP_002425051.1 218667171 7134716 complement(497649..499202) 1 NC_011761.1 identified by match to protein family HMM PF03023; match to protein family HMM TIGR01695; integral membrane protein MviN 499202 mviN 7134716 mviN Acidithiobacillus ferrooxidans ATCC 23270 integral membrane protein MviN YP_002425051.1 497649 R 243159 CDS YP_002425052.1 218666472 7134720 499216..499575 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 499575 7134720 AFE_0561 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425052.1 499216 D 243159 CDS YP_002425053.1 218665792 7136282 complement(499528..499896) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 499896 7136282 AFE_0560 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425053.1 499528 R 243159 CDS YP_002425054.1 218667393 7136107 500146..501009 1 NC_011761.1 identified by similarity to SP:P23839; match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; yicC family protein 501009 7136107 AFE_0562 Acidithiobacillus ferrooxidans ATCC 23270 yicC family protein YP_002425054.1 500146 D 243159 CDS YP_002425055.1 218666699 7136916 501016..501654 1 NC_011761.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 501654 gmk 7136916 gmk Acidithiobacillus ferrooxidans ATCC 23270 guanylate kinase YP_002425055.1 501016 D 243159 CDS YP_002425056.1 218668020 7134570 501678..501953 1 NC_011761.1 identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 501953 rpoZ 7134570 rpoZ Acidithiobacillus ferrooxidans ATCC 23270 DNA-directed RNA polymerase subunit omega YP_002425056.1 501678 D 243159 CDS YP_002425057.1 218666350 7134785 502012..504216 1 NC_011761.1 identified by similarity to SP:P17580; match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 504216 spoT 7134785 spoT Acidithiobacillus ferrooxidans ATCC 23270 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_002425057.1 502012 D 243159 CDS YP_002425058.1 218666375 7136489 504232..504621 1 NC_011761.1 identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP 504621 7136489 AFE_0566 Acidithiobacillus ferrooxidans ATCC 23270 endoribonuclease L-PSP YP_002425058.1 504232 D 243159 CDS YP_002425059.1 218667540 7136515 504623..504838 1 NC_011761.1 identified by similarity to GB:AAL95505.1; hypothetical protein 504838 7136515 AFE_0567 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425059.1 504623 D 243159 CDS YP_002425060.1 218667943 7136406 504840..506894 1 NC_011761.1 identified by similarity to SP:P24230; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM PF04851; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 506894 recG 7136406 recG Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase RecG YP_002425060.1 504840 D 243159 CDS YP_002425061.1 218667021 7135250 506987..507832 1 NC_011761.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 507832 7135250 AFE_0569 Acidithiobacillus ferrooxidans ATCC 23270 ErfK/YbiS/YcfS/YnhG family protein YP_002425061.1 506987 D 243159 CDS YP_002425062.1 218666045 7134886 complement(507844..509184) 1 NC_011761.1 identified by similarity to SP:P56601; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562; protoporphyrinogen oxidase 509184 hemG 7134886 hemG Acidithiobacillus ferrooxidans ATCC 23270 protoporphyrinogen oxidase YP_002425062.1 507844 R 243159 CDS YP_002425063.1 218665195 7136965 complement(509189..510232) 1 NC_011761.1 identified by match to protein family HMM PF01594; hypothetical protein 510232 7136965 AFE_0571 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425063.1 509189 R 243159 CDS YP_002425064.1 218667506 7135681 510541..511335 1 NC_011761.1 identified by similarity to SP:Q96YW6; match to protein family HMM PF01875; hypothetical protein 511335 7135681 AFE_0572 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425064.1 510541 D 243159 CDS YP_002425065.1 218665306 7136371 511316..511924 1 NC_011761.1 identified by similarity to PIR:B64401; match to protein family HMM PF01871; match to protein family HMM TIGR00296; hypothetical protein 511924 7136371 AFE_0573 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425065.1 511316 D 243159 CDS YP_002425066.1 218665968 7136247 511917..513002 1 NC_011761.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 513002 7136247 AFE_0574 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002425066.1 511917 D 243159 CDS YP_002425067.1 218665798 7134181 complement(513010..514344) 1 NC_011761.1 identified by similarity to SP:P02930; match to protein family HMM PF02321; match to protein family HMM TIGR01844; TolC family type I secretion outer membrane protein 514344 7134181 AFE_0575 Acidithiobacillus ferrooxidans ATCC 23270 TolC family type I secretion outer membrane protein YP_002425067.1 513010 R 243159 CDS YP_002425068.1 218665126 7136113 514510..515898 1 NC_011761.1 identified by similarity to SP:P05041; match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00553; para-aminobenzoate synthase, component I 515898 pabB 7136113 pabB Acidithiobacillus ferrooxidans ATCC 23270 para-aminobenzoate synthase, component I YP_002425068.1 514510 D 243159 CDS YP_002425069.1 218667544 7134277 515873..516952 1 NC_011761.1 identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 516952 7134277 AFE_0577 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425069.1 515873 D 243159 CDS YP_002425070.1 218666997 7135846 517171..517464 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 517464 7135846 AFE_0579 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425070.1 517171 D 243159 CDS YP_002425071.1 218667364 7134860 517499..517630 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 517630 7134860 AFE_0580 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425071.1 517499 D 243159 CDS YP_002425072.1 218665312 7136886 517630..517812 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 517812 7136886 AFE_0581 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425072.1 517630 D 243159 CDS YP_002425073.1 218666485 7136253 complement(517863..518060) 1 NC_011761.1 identified by similarity to GB:AAL62784.1; hypothetical protein 518060 7136253 AFE_0582 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425073.1 517863 R 243159 CDS YP_002425074.1 218665784 7136295 complement(518054..518284) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 518284 7136295 AFE_0583 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425074.1 518054 R 243159 CDS YP_002425075.1 218666675 7134211 519125..519379 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 519379 7134211 AFE_0585 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425075.1 519125 D 243159 CDS YP_002425076.1 218666339 7135845 complement(519523..520530) 1 NC_011761.1 identified by match to protein family HMM PF01699; sodium/calcium exchanger 520530 7135845 AFE_0587 Acidithiobacillus ferrooxidans ATCC 23270 sodium/calcium exchanger YP_002425076.1 519523 R 243159 CDS YP_002425077.1 218667226 7136478 520643..521266 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 521266 7136478 AFE_0588 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425077.1 520643 D 243159 CDS YP_002425078.1 218666755 7135620 521368..523221 1 NC_011761.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; ATP-dependent RNA helicase 523221 7135620 AFE_0589 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent RNA helicase YP_002425078.1 521368 D 243159 CDS YP_002425079.1 218666777 7137250 complement(523319..523522) 1 NC_011761.1 identified by similarity to GB:AAD10037.1; match to protein family HMM PF00313; cold-shock protein 523522 7137250 AFE_0590 Acidithiobacillus ferrooxidans ATCC 23270 cold-shock protein YP_002425079.1 523319 R 243159 CDS YP_002425080.1 218668060 7137273 complement(523626..525788) 1 NC_011761.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00595; primosomal protein N` 525788 priA 7137273 priA Acidithiobacillus ferrooxidans ATCC 23270 primosomal protein N` YP_002425080.1 523626 R 243159 CDS YP_002425081.1 218665429 7136795 complement(526056..526958) 1 NC_011761.1 identified by similarity to SP:P26601; match to protein family HMM PF01040; match to protein family HMM TIGR01474; 4-hydroxybenzoate polyprenyltransferase 526958 ubiA 7136795 ubiA Acidithiobacillus ferrooxidans ATCC 23270 4-hydroxybenzoate polyprenyltransferase YP_002425081.1 526056 R 243159 CDS YP_002425082.1 218665901 7135041 complement(526958..527470) 1 NC_011761.1 identified by match to protein family HMM PF04345; chorismate lyase family protein 527470 7135041 AFE_0593 Acidithiobacillus ferrooxidans ATCC 23270 chorismate lyase family protein YP_002425082.1 526958 R 243159 CDS YP_002425083.1 218667726 7134111 complement(527561..528163) 1 NC_011761.1 identified by similarity to GB:CAB91878.1; phosphatidylethanolamine N-methyltransferase 528163 7134111 AFE_0594 Acidithiobacillus ferrooxidans ATCC 23270 phosphatidylethanolamine N-methyltransferase YP_002425083.1 527561 R 243159 CDS YP_002425084.1 218665105 7135509 528323..528706 1 NC_011761.1 lipoprotein 528706 7135509 AFE_0595 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425084.1 528323 D 243159 CDS YP_002425085.1 218665819 7134256 528790..530145 1 NC_011761.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 530145 miaB 7134256 miaB Acidithiobacillus ferrooxidans ATCC 23270 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002425085.1 528790 D 243159 CDS YP_002425086.1 218668013 7135373 530111..531133 1 NC_011761.1 identified by similarity to SP:P77349; match to protein family HMM PF02562; PhoH-like protein 531133 7135373 AFE_0597 Acidithiobacillus ferrooxidans ATCC 23270 PhoH-like protein YP_002425086.1 530111 D 243159 CDS YP_002425087.1 218666487 7134778 531151..531627 1 NC_011761.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 531627 7134778 AFE_0598 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425087.1 531151 D 243159 CDS YP_002425088.1 218665985 7136297 531620..532495 1 NC_011761.1 identified by similarity to SP:Q9R874; match to protein family HMM PF00571; match to protein family HMM PF03471; magnesium and cobalt efflux protein 532495 7136297 AFE_0599 Acidithiobacillus ferrooxidans ATCC 23270 magnesium and cobalt efflux protein YP_002425088.1 531620 D 243159 CDS YP_002425089.1 218667458 7134199 532507..534012 1 NC_011761.1 identified by similarity to SP:P23930; match to protein family HMM PF00795; match to protein family HMM TIGR00546; apolipoprotein N-acyltransferase 534012 cutE 7134199 cutE Acidithiobacillus ferrooxidans ATCC 23270 apolipoprotein N-acyltransferase YP_002425089.1 532507 D 243159 CDS YP_002425090.1 218666455 7136749 complement(533981..535327) 1 NC_011761.1 identified by similarity to SP:P24231; match to protein family HMM PF01523; pmbA protein 535327 pmbA 7136749 pmbA Acidithiobacillus ferrooxidans ATCC 23270 pmbA protein YP_002425090.1 533981 R 243159 CDS YP_002425091.1 218666083 7134401 535621..536505 1 NC_011761.1 identified by match to protein family HMM PF01297; cation ABC transporter periplasmic cation-binding protein 536505 7134401 AFE_0602 Acidithiobacillus ferrooxidans ATCC 23270 cation ABC transporter periplasmic cation-binding protein YP_002425091.1 535621 D 243159 CDS YP_002425092.1 218665045 7137003 536519..537343 1 NC_011761.1 identified by match to protein family HMM PF00005; cation ABC transporter ATP-binding protein 537343 7137003 AFE_0603 Acidithiobacillus ferrooxidans ATCC 23270 cation ABC transporter ATP-binding protein YP_002425092.1 536519 D 243159 CDS YP_002425093.1 218666765 7134974 537363..538253 1 NC_011761.1 identified by match to protein family HMM PF00950; cation ABC transporter permease 538253 7134974 AFE_0604 Acidithiobacillus ferrooxidans ATCC 23270 cation ABC transporter permease YP_002425093.1 537363 D 243159 CDS YP_002425094.1 218665594 7137261 538257..539066 1 NC_011761.1 identified by match to protein family HMM PF00950; cation ABC transporter permease 539066 7137261 AFE_0605 Acidithiobacillus ferrooxidans ATCC 23270 cation ABC transporter permease YP_002425094.1 538257 D 243159 CDS YP_002425095.1 218667690 7135537 complement(539103..540368) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 540368 7135537 AFE_0606 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425095.1 539103 R 243159 CDS YP_002425096.1 218668055 7135473 complement(540304..541134) 1 NC_011761.1 identified by similarity to GB:AAN66818.1; hypothetical protein 541134 7135473 AFE_0607 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425096.1 540304 R 243159 CDS YP_002425097.1 218665161 7136790 complement(541242..541418) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 541418 7136790 AFE_0608 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425097.1 541242 R 243159 CDS YP_002425098.1 218666879 7134313 complement(541415..542428) 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 542428 7134313 AFE_0609 Acidithiobacillus ferrooxidans ATCC 23270 NAD-dependent epimerase/dehydratase family protein YP_002425098.1 541415 R 243159 CDS YP_002425099.1 218665579 7134589 complement(542425..542676) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 542676 7134589 AFE_0610 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425099.1 542425 R 243159 CDS YP_002425100.1 218667302 7135951 complement(542742..544058) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 544058 7135951 AFE_0611 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425100.1 542742 R 243159 CDS YP_002425101.1 218665623 7135146 complement(543982..544824) 1 NC_011761.1 identified by similarity to GB:AAN66818.1; hypothetical protein 544824 7135146 AFE_0612 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425101.1 543982 R 243159 CDS YP_002425102.1 218667366 7135566 complement(545408..545614) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 545614 7135566 AFE_0613 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425102.1 545408 R 243159 CDS YP_002425103.1 218666646 7136888 545720..546949 1 NC_011761.1 identified by similarity to PIR:AD2455; hypothetical protein 546949 7136888 AFE_0614 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425103.1 545720 D 243159 CDS YP_002425104.1 218666145 7134517 546946..548208 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 548208 7134517 AFE_0615 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002425104.1 546946 D 243159 CDS YP_002425105.1 218667015 7134045 548205..549449 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 549449 7134045 AFE_0616 Acidithiobacillus ferrooxidans ATCC 23270 group 1 family glycosyltransferase YP_002425105.1 548205 D 243159 CDS YP_002425106.1 218668147 7134879 549449..551278 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter permease/ATP-binding protein 551278 7134879 AFE_0617 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease/ATP-binding protein YP_002425106.1 549449 D 243159 CDS YP_002425107.1 218665658 7135966 551275..552579 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose/GDP-mannose dehydrogenase family protein 552579 7135966 AFE_0618 Acidithiobacillus ferrooxidans ATCC 23270 UDP-glucose/GDP-mannose dehydrogenase family protein YP_002425107.1 551275 D 243159 CDS YP_002425108.1 218666679 7137141 552620..553462 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 553462 7137141 AFE_0619 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425108.1 552620 D 243159 CDS YP_002425109.1 218667374 7134550 553474..554142 1 NC_011761.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR03162; phosphoglycerate mutase family protein 554142 7134550 AFE_0621 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglycerate mutase family protein YP_002425109.1 553474 D 243159 CDS YP_002425110.1 218666688 7136896 complement(554119..554904) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 554904 7136896 AFE_0620 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425110.1 554119 R 243159 CDS YP_002425111.1 218665132 7134559 complement(555070..555882) 1 NC_011761.1 identified by similarity to GB:BAC65281.1; hypothetical protein 555882 7134559 AFE_0622 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425111.1 555070 R 243159 CDS YP_002425112.1 218667049 7134283 556014..556778 1 NC_011761.1 identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methyltransferase 556778 7134283 AFE_0623 Acidithiobacillus ferrooxidans ATCC 23270 UbiE/COQ5 family methyltransferase YP_002425112.1 556014 D 243159 CDS YP_002425113.1 218666384 7136649 556828..558240 1 NC_011761.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 558240 leuC 7136649 leuC Acidithiobacillus ferrooxidans ATCC 23270 isopropylmalate isomerase large subunit YP_002425113.1 556828 D 243159 CDS YP_002425114.1 218667972 7136524 558209..558388 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 558388 7136524 AFE_0625 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425114.1 558209 D 243159 CDS YP_002425115.1 218667399 7134736 558388..559011 1 NC_011761.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 559011 leuD 7134736 leuD Acidithiobacillus ferrooxidans ATCC 23270 isopropylmalate isomerase small subunit YP_002425115.1 558388 D 243159 CDS YP_002425116.1 218666806 7136922 559032..559346 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 559346 7136922 AFE_0627 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425116.1 559032 D 243159 CDS YP_002425117.1 218667687 7137055 complement(559363..560019) 1 NC_011761.1 identified by similarity to SP:P28225; match to protein family HMM PF01243; match to protein family HMM TIGR00558; pyridoxamine 5'-phosphate oxidase 560019 pdxH 7137055 pdxH Acidithiobacillus ferrooxidans ATCC 23270 pyridoxamine 5'-phosphate oxidase YP_002425117.1 559363 R 243159 CDS YP_002425118.1 218667168 7135470 complement(560051..560710) 1 NC_011761.1 identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 560710 rpiA 7135470 rpiA Acidithiobacillus ferrooxidans ATCC 23270 ribose 5-phosphate isomerase A YP_002425118.1 560051 R 243159 CDS YP_002425119.1 218665643 7134717 complement(560700..561452) 1 NC_011761.1 identified by match to protein family HMM PF01965; DJ-1/PfpI family protein 561452 7134717 AFE_0630 Acidithiobacillus ferrooxidans ATCC 23270 DJ-1/PfpI family protein YP_002425119.1 560700 R 243159 CDS YP_002425120.1 218666745 7137126 562218..563183 1 NC_011761.1 identified by similarity to SP:P18400; match to protein family HMM PF00116; match to protein family HMM PF06481; cytochrome o ubiquinol oxidase subunit II 563183 cyoA 7137126 cyoA Acidithiobacillus ferrooxidans ATCC 23270 cytochrome o ubiquinol oxidase subunit II YP_002425120.1 562218 D 243159 CDS YP_002425121.1 218667210 7137240 563236..565353 1 NC_011761.1 identified by similarity to SP:P18401; match to protein family HMM PF00115; cytochrome o ubiquinol oxidase subunit I 565353 cyoB 7137240 cyoB Acidithiobacillus ferrooxidans ATCC 23270 cytochrome o ubiquinol oxidase subunit I YP_002425121.1 563236 D 243159 CDS YP_002425122.1 218665051 7135604 565420..566055 1 NC_011761.1 identified by similarity to SP:P18402; cytochrome o ubiquinol oxidase subunit III 566055 cyoC 7135604 cyoC Acidithiobacillus ferrooxidans ATCC 23270 cytochrome o ubiquinol oxidase subunit III YP_002425122.1 565420 D 243159 CDS YP_002425123.1 218667693 7134980 566052..566408 1 NC_011761.1 identified by similarity to SP:P18403; cytochrome o ubiquinol oxidase subunit IV 566408 cyoD 7134980 cyoD Acidithiobacillus ferrooxidans ATCC 23270 cytochrome o ubiquinol oxidase subunit IV YP_002425123.1 566052 D 243159 CDS YP_002425124.1 218667714 7135476 566437..567381 1 NC_011761.1 identified by similarity to SP:P56938; match to protein family HMM PF01040; match to protein family HMM TIGR01473; protoheme IX farnesyltransferase 567381 cyoE-1 7135476 cyoE-1 Acidithiobacillus ferrooxidans ATCC 23270 protoheme IX farnesyltransferase YP_002425124.1 566437 D 243159 CDS YP_002425125.1 218666493 7135497 567401..568603 1 NC_011761.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 568603 7135497 AFE_0637 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002425125.1 567401 D 243159 CDS YP_002425126.1 218668093 7136303 complement(568597..569430) 1 NC_011761.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 569430 7136303 AFE_0636 Acidithiobacillus ferrooxidans ATCC 23270 undecaprenyl pyrophosphate phosphatase YP_002425126.1 568597 R 243159 CDS YP_002425127.1 218665891 7136829 complement(569442..569918) 1 NC_011761.1 identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 569918 greA 7136829 greA Acidithiobacillus ferrooxidans ATCC 23270 transcription elongation factor GreA YP_002425127.1 569442 R 243159 CDS YP_002425128.1 218666972 7134101 complement(569915..573154) 1 NC_011761.1 identified by similarity to SP:P00968; match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 573154 carB 7134101 carB Acidithiobacillus ferrooxidans ATCC 23270 carbamoyl-phosphate synthase large subunit YP_002425128.1 569915 R 243159 CDS YP_002425129.1 218667825 7134835 complement(573147..574289) 1 NC_011761.1 identified by similarity to SP:P00907; match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; carbamoyl-phosphate synthase small subunit 574289 carA 7134835 carA Acidithiobacillus ferrooxidans ATCC 23270 carbamoyl-phosphate synthase small subunit YP_002425129.1 573147 R 243159 CDS YP_002425130.1 218667081 7134903 574524..575210 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 575210 7134903 AFE_0641 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425130.1 574524 D 243159 CDS YP_002425131.1 218666788 7136681 575314..575514 1 NC_011761.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 575514 thiS 7136681 thiS Acidithiobacillus ferrooxidans ATCC 23270 thiamine biosynthesis protein ThiS YP_002425131.1 575314 D 243159 CDS YP_002425132.1 218666445 7136634 575559..576341 1 NC_011761.1 identified by match to protein family HMM PF05690; thiamin biosynthesis protein ThiG 576341 thiG 7136634 thiG Acidithiobacillus ferrooxidans ATCC 23270 thiamin biosynthesis protein ThiG YP_002425132.1 575559 D 243159 CDS YP_002425133.1 218665516 7134391 576322..576912 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 576912 7134391 AFE_0644 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425133.1 576322 D 243159 CDS YP_002425134.1 218668082 7135887 576924..578291 1 NC_011761.1 identified by similarity to SP:P37773; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01081; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 578291 mpl 7135887 mpl Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_002425134.1 576924 D 243159 CDS YP_002425135.1 218666130 7136818 578323..578940 1 NC_011761.1 identified by match to protein family HMM PF02441; match to protein family HMM TIGR00421; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 578940 7136818 AFE_0647 Acidithiobacillus ferrooxidans ATCC 23270 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002425135.1 578323 D 243159 CDS YP_002425136.1 218666098 7134030 complement(578873..579724) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 579724 7134030 AFE_0646 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002425136.1 578873 R 243159 CDS YP_002425137.1 218665617 7137019 complement(579724..580860) 1 NC_011761.1 identified by similarity to GB:AAN65776.1; match to protein family HMM PF02405; match to protein family HMM TIGR00056; ABC transporter permease 580860 7137019 AFE_0648 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002425137.1 579724 R 243159 CDS YP_002425138.1 218667005 7135560 580905..581408 1 NC_011761.1 identified by similarity to PIR:H83630; hypothetical protein 581408 7135560 AFE_0650 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425138.1 580905 D 243159 CDS YP_002425139.1 218667695 7134868 complement(581353..582105) 1 NC_011761.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 582105 7134868 AFE_0649 Acidithiobacillus ferrooxidans ATCC 23270 endonuclease/exonuclease/phosphatase family protein YP_002425139.1 581353 R 243159 CDS YP_002425140.1 218665270 7135478 complement(582122..582472) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 582472 7135478 AFE_0651 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425140.1 582122 R 243159 CDS YP_002425141.1 218665619 7136211 complement(582469..583224) 1 NC_011761.1 identified by similarity to SP:P12282; match to protein family HMM PF00899; match to protein family HMM PF05237; molybdopterin biosynthesis protein MoeB 583224 moeB 7136211 moeB Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin biosynthesis protein MoeB YP_002425141.1 582469 R 243159 CDS YP_002425142.1 218665553 7135562 complement(583361..584587) 1 NC_011761.1 identified by similarity to GB:CAD85317.1; hypothetical protein 584587 7135562 AFE_0653 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425142.1 583361 R 243159 CDS YP_002425143.1 218666272 7135925 complement(584496..587003) 1 NC_011761.1 identified by match to protein family HMM PF02687; ABC transporter permease 587003 7135925 AFE_0654 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002425143.1 584496 R 243159 CDS YP_002425144.1 218668078 7136629 complement(587000..587674) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 587674 7136629 AFE_0655 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002425144.1 587000 R 243159 CDS YP_002425145.1 218668089 7136032 588124..588450 1 NC_011761.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 588450 trx 7136032 trx Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin YP_002425145.1 588124 D 243159 CDS YP_002425146.1 218665961 7136825 588567..589823 1 NC_011761.1 identified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM PF08206; match to protein family HMM TIGR00767; transcription termination factor Rho 589823 rho 7136825 rho Acidithiobacillus ferrooxidans ATCC 23270 transcription termination factor Rho YP_002425146.1 588567 D 243159 CDS YP_002425147.1 218666852 7134172 589898..590104 1 NC_011761.1 identified by similarity to SP:P02432; match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 590104 rpmE 7134172 rpmE Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L31 YP_002425147.1 589898 D 243159 CDS YP_002425148.1 218667719 7137101 590111..591349 1 NC_011761.1 identified by similarity to SP:O30808; match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme family protein 591349 7137101 AFE_0660 Acidithiobacillus ferrooxidans ATCC 23270 malic enzyme family protein YP_002425148.1 590111 D 243159 CDS YP_002425149.1 218666280 7135502 591356..592411 1 NC_011761.1 identified by similarity to GB:AAN69743.1; match to protein family HMM PF01594; hypothetical protein 592411 7135502 AFE_0661 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425149.1 591356 D 243159 CDS YP_002425150.1 218668120 7137288 592517..594358 1 NC_011761.1 identified by similarity to SP:P51785; match to protein family HMM PF00920; match to protein family HMM TIGR00110; dihydroxy-acid dehydratase 594358 ilvD-2 7137288 ilvD-2 Acidithiobacillus ferrooxidans ATCC 23270 dihydroxy-acid dehydratase YP_002425150.1 592517 D 243159 CDS YP_002425151.1 218667530 7136857 594365..595321 1 NC_011761.1 identified by similarity to GB:BAC50332.1; match to protein family HMM PF01936; hypothetical protein 595321 7136857 AFE_0663 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425151.1 594365 D 243159 CDS YP_002425152.1 218667829 7136396 complement(595336..596643) 1 NC_011761.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 596643 argA 7136396 argA Acidithiobacillus ferrooxidans ATCC 23270 N-acetylglutamate synthase YP_002425152.1 595336 R 243159 CDS YP_002425153.1 218667569 7134907 complement(596659..596970) 1 NC_011761.1 identified by match to protein family HMM PF01722; BolA family protein 596970 7134907 AFE_0665 Acidithiobacillus ferrooxidans ATCC 23270 BolA family protein YP_002425153.1 596659 R 243159 CDS YP_002425154.1 218667630 7136435 complement(596967..597296) 1 NC_011761.1 identified by match to protein family HMM PF03795; YCII-related domain-containing protein 597296 7136435 AFE_0666 Acidithiobacillus ferrooxidans ATCC 23270 YCII-related domain-containing protein YP_002425154.1 596967 R 243159 CDS YP_002425155.1 218665840 7135804 complement(597352..597909) 1 NC_011761.1 identified by similarity to SP:P95745; match to protein family HMM PF04279; match to protein family HMM TIGR00997; intracellular septation protein A 597909 ispZ 7135804 ispZ Acidithiobacillus ferrooxidans ATCC 23270 intracellular septation protein A YP_002425155.1 597352 R 243159 CDS YP_002425156.1 218665216 7135395 597972..598835 1 NC_011761.1 identified by similarity to GB:CAD86126.1; match to protein family HMM PF05673; hypothetical protein 598835 7135395 AFE_0668 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425156.1 597972 D 243159 CDS YP_002425157.1 218668167 7135704 complement(598920..599723) 1 NC_011761.1 identified by match to protein family HMM PF00459; inositol monophosphate family protein 599723 7135704 AFE_0669 Acidithiobacillus ferrooxidans ATCC 23270 inositol monophosphate family protein YP_002425157.1 598920 R 243159 CDS YP_002425158.1 218666933 7135986 599805..600575 1 NC_011761.1 identified by match to protein family HMM PF00588; match to protein family HMM TIGR00050; TrmH family RNA methyltransferase 600575 7135986 AFE_0670 Acidithiobacillus ferrooxidans ATCC 23270 TrmH family RNA methyltransferase YP_002425158.1 599805 D 243159 CDS YP_002425159.1 218667754 7134643 600620..601369 1 NC_011761.1 identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 601369 cysE-2 7134643 cysE-2 Acidithiobacillus ferrooxidans ATCC 23270 serine O-acetyltransferase YP_002425159.1 600620 D 243159 CDS YP_002425160.1 218666431 7134428 601415..601903 1 NC_011761.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; iron-sulfur cluster assembly transcription factor IscR 601903 iscR 7134428 iscR Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster assembly transcription factor IscR YP_002425160.1 601415 D 243159 CDS YP_002425161.1 218667898 7134377 601965..603188 1 NC_011761.1 identified by similarity to SP:P39171; match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR02006; cysteine desulfurase IscS 603188 iscS-3 7134377 iscS-3 Acidithiobacillus ferrooxidans ATCC 23270 cysteine desulfurase IscS YP_002425161.1 601965 D 243159 CDS YP_002425162.1 218666957 7135205 603213..603644 1 NC_011761.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01999; FeS cluster assembly scaffold protein IscU 603644 iscU 7135205 iscU Acidithiobacillus ferrooxidans ATCC 23270 FeS cluster assembly scaffold protein IscU YP_002425162.1 603213 D 243159 CDS YP_002425163.1 218665449 7134820 603654..603977 1 NC_011761.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; match to protein family HMM TIGR02011; iron-sulfur cluster assembly protein IscA 603977 iscA 7134820 iscA Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster assembly protein IscA YP_002425163.1 603654 D 243159 CDS YP_002425164.1 218668123 7135061 604049..604594 1 NC_011761.1 identified by similarity to SP:P36540; match to protein family HMM PF00226; match to protein family HMM PF07743; match to protein family HMM TIGR00714; co-chaperone Hsc20 604594 hscB 7135061 hscB Acidithiobacillus ferrooxidans ATCC 23270 co-chaperone Hsc20 YP_002425164.1 604049 D 243159 CDS YP_002425165.1 218666307 7136860 604628..606493 1 NC_011761.1 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 606493 hscA 7136860 hscA Acidithiobacillus ferrooxidans ATCC 23270 chaperone protein HscA YP_002425165.1 604628 D 243159 CDS YP_002425166.1 218666482 7136445 606494..606832 1 NC_011761.1 identified by similarity to SP:P25528; match to protein family HMM PF00111; match to protein family HMM TIGR02007; ferredoxin, 2Fe-2S 606832 fdx 7136445 fdx Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin, 2Fe-2S YP_002425166.1 606494 D 243159 CDS YP_002425167.1 218667621 7136292 606832..607026 1 NC_011761.1 identified by similarity to SP:Q51384; match to protein family HMM PF04384; match to protein family HMM TIGR03412; hypothetical protein 607026 7136292 AFE_0679 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425167.1 606832 D 243159 CDS YP_002425168.1 218666259 7135795 607040..608098 1 NC_011761.1 identified by match to protein family HMM PF03054; match to protein family HMM PF06508; match to protein family HMM TIGR00420; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 608098 trmU 7135795 trmU Acidithiobacillus ferrooxidans ATCC 23270 tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_002425168.1 607040 D 243159 CDS YP_002425169.1 218665838 7136616 complement(608117..609016) 1 NC_011761.1 identified by match to protein family HMM PF01734; patatin-like phospholipase family protein 609016 7136616 AFE_0681 Acidithiobacillus ferrooxidans ATCC 23270 patatin-like phospholipase family protein YP_002425169.1 608117 R 243159 CDS YP_002425170.1 218667333 7135392 609219..609326 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 609326 7135392 AFE_0682 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425170.1 609219 D 243159 CDS YP_002425171.1 218668061 7135178 609339..611693 1 NC_011761.1 identified by similarity to SP:Q47281; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM PF08463; type I restriction-modification system, R subunit 611693 7135178 AFE_0683 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, R subunit YP_002425171.1 609339 D 243159 CDS YP_002425172.1 218666304 7136796 611690..613159 1 NC_011761.1 identified by similarity to SP:Q47282; match to protein family HMM PF02384; type I restriction-modification system, M subunit 613159 7136796 AFE_0684 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, M subunit YP_002425172.1 611690 D 243159 CDS YP_002425173.1 218665116 7137312 613165..614139 1 NC_011761.1 identified by match to protein family HMM PF05012; match to protein family HMM TIGR01550; death-on-curing family protein 614139 7137312 AFE_0685 Acidithiobacillus ferrooxidans ATCC 23270 death-on-curing family protein YP_002425173.1 613165 D 243159 CDS YP_002425174.1 218667559 7134267 614145..615830 1 NC_011761.1 identified by similarity to SP:P19704; match to protein family HMM PF01420; type I restriction-modification system subunit S 615830 7134267 AFE_0686 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system subunit S YP_002425174.1 614145 D 243159 CDS YP_002425175.1 218666689 7136425 616123..617682 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 617682 7136425 AFE_0687 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425175.1 616123 D 243159 CDS YP_002425176.1 218667945 7134560 complement(617998..618180) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 618180 7134560 AFE_0688 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425176.1 617998 R 243159 CDS YP_002425177.1 218665707 7135252 618147..618707 1 NC_011761.1 transposase, degenerate 618707 7135252 AFE_0689 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002425177.1 618147 D 243159 CDS YP_002425178.1 218667122 7137190 complement(618716..619573) 1 NC_011761.1 identified by match to protein family HMM PF02634; match to protein family HMM TIGR00129; formate dehydrogenase family accessory protein FdhD 619573 fdhD-2 7137190 fdhD-2 Acidithiobacillus ferrooxidans ATCC 23270 formate dehydrogenase family accessory protein FdhD YP_002425178.1 618716 R 243159 CDS YP_002425179.1 218667092 7134668 complement(619543..619782) 1 NC_011761.1 identified by similarity to GB:AAM37336.1; hypothetical protein 619782 7134668 AFE_0691 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425179.1 619543 R 243159 CDS YP_002425180.1 218668006 7136692 complement(619832..622108) 1 NC_011761.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01701; oxidoreductase molybdopterin subunit 622108 7136692 AFE_0692 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase molybdopterin subunit YP_002425180.1 619832 R 243159 CDS YP_002425181.1 218667485 7134770 622336..624267 1 NC_011761.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator 624267 7134770 AFE_0693 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator YP_002425181.1 622336 D 243159 CDS YP_002425182.1 218667711 7136777 624279..624497 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 624497 7136777 AFE_0695 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425182.1 624279 D 243159 CDS YP_002425183.1 218666944 7135494 complement(624443..624556) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 624556 7135494 AFE_0694 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425183.1 624443 R 243159 CDS YP_002425184.1 218666299 7134654 624681..625265 1 NC_011761.1 catalyzes the reaction of formaldehyde with glutathione to form S-hydroxymethylglutathione; glutathione-dependent formaldehyde-activating protein 625265 gfa 7134654 gfa Acidithiobacillus ferrooxidans ATCC 23270 glutathione-dependent formaldehyde-activating protein YP_002425184.1 624681 D 243159 CDS YP_002425185.1 218665477 7137307 625364..626473 1 NC_011761.1 identified by similarity to SP:P72324; match to protein family HMM PF00107; match to protein family HMM PF08240; match to protein family HMM TIGR02818; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 626473 7137307 AFE_0697 Acidithiobacillus ferrooxidans ATCC 23270 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase YP_002425185.1 625364 D 243159 CDS YP_002425186.1 218667592 7135090 626473..627327 1 NC_011761.1 identified by match to protein family HMM PF00756; match to protein family HMM TIGR02821; S-formylglutathione hydrolase 627327 fghA 7135090 fghA Acidithiobacillus ferrooxidans ATCC 23270 S-formylglutathione hydrolase YP_002425186.1 626473 D 243159 CDS YP_002425187.1 218667533 7135764 complement(627352..628314) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; sulfur assimilation LysR family transcriptional regulator 628314 cysB 7135764 cysB Acidithiobacillus ferrooxidans ATCC 23270 sulfur assimilation LysR family transcriptional regulator YP_002425187.1 627352 R 243159 CDS YP_002425188.1 218665909 7136399 complement(628370..629818) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; hydrogenase sigma-54 dependent DNA-binding response regulator 629818 hupR 7136399 hupR Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase sigma-54 dependent DNA-binding response regulator YP_002425188.1 628370 R 243159 CDS YP_002425189.1 218667209 7134119 630000..630962 1 NC_011761.1 identified by match to protein family HMM PF01058; hydrogenase-2, small subunit 630962 hybA 7134119 hybA Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-2, small subunit YP_002425189.1 630000 D 243159 CDS YP_002425190.1 218665568 7135603 631013..632611 1 NC_011761.1 identified by match to protein family HMM PF00374; hydrogenase-2, large subunit 632611 hybC 7135603 hybC Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-2, large subunit YP_002425190.1 631013 D 243159 CDS YP_002425191.1 218665907 7135940 632701..633021 1 NC_011761.1 identified by similarity to SP:P00264; hypothetical protein 633021 7135940 AFE_0703 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425191.1 632701 D 243159 CDS YP_002425192.1 218665772 7134117 633040..633372 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 633372 7134117 AFE_0704 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425192.1 633040 D 243159 CDS YP_002425193.1 218666869 7136087 633375..633848 1 NC_011761.1 identified by match to protein family HMM TIGR00072; hydrogenase maturation protease 633848 7136087 AFE_0705 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase maturation protease YP_002425193.1 633375 D 243159 CDS YP_002425194.1 218665806 7137118 633845..634174 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 634174 7137118 AFE_0706 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425194.1 633845 D 243159 CDS YP_002425195.1 218665476 7135360 634273..635253 1 NC_011761.1 identified by similarity to PIR:AI1892; hypothetical protein 635253 7135360 AFE_0707 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425195.1 634273 D 243159 CDS YP_002425196.1 218667745 7135089 635278..635505 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 635505 7135089 AFE_0708 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425196.1 635278 D 243159 CDS YP_002425197.1 218667531 7134419 635534..635758 1 NC_011761.1 hypothetical protein 635758 7134419 AFE_0709 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425197.1 635534 D 243159 CDS YP_002425198.1 218667970 7136397 635775..636665 1 NC_011761.1 identified by match to protein family HMM PF00355; match to protein family HMM PF01106; iron-sulfur cluster-binding protein, Rieske family 636665 7136397 AFE_0710 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein, Rieske family YP_002425198.1 635775 D 243159 CDS YP_002425199.1 218666969 7135277 636658..637854 1 NC_011761.1 identified by match to protein family HMM PF01436; NHL repeat protein 637854 7135277 AFE_0711 Acidithiobacillus ferrooxidans ATCC 23270 NHL repeat protein YP_002425199.1 636658 D 243159 CDS YP_002425200.1 218667633 7134832 637851..640262 1 NC_011761.1 identified by similarity to SP:P30131; match to protein family HMM PF00708; match to protein family HMM PF01300; match to protein family HMM PF07503; match to protein family HMM TIGR00143; [NiFe] hydrogenase maturation protein HypF 640262 hypF 7134832 hypF Acidithiobacillus ferrooxidans ATCC 23270 [NiFe] hydrogenase maturation protein HypF YP_002425200.1 637851 D 243159 CDS YP_002425201.1 218667180 7135807 640253..640546 1 NC_011761.1 identified by similarity to SP:P24191; match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC 640546 hypC-1 7135807 hypC-1 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase assembly chaperone HypC YP_002425201.1 640253 D 243159 CDS YP_002425202.1 218667775 7134729 640565..641260 1 NC_011761.1 identified by similarity to SP:Q9AGY7; match to protein family HMM TIGR00441; phosphoheptose isomerase 641260 gmhA 7134729 gmhA Acidithiobacillus ferrooxidans ATCC 23270 phosphoheptose isomerase YP_002425202.1 640565 D 243159 CDS YP_002425203.1 218667346 7134450 641244..642389 1 NC_011761.1 identified by similarity to SP:P24192; match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 642389 hypD-1 7134450 hypD-1 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase expression/formation protein HypD YP_002425203.1 641244 D 243159 CDS YP_002425204.1 218666891 7135191 642389..643447 1 NC_011761.1 identified by similarity to SP:P40595; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124; hydrogenase expression/formation protein HypE 643447 hypE 7135191 hypE Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase expression/formation protein HypE YP_002425204.1 642389 D 243159 CDS YP_002425205.1 218668030 7134601 643461..643790 1 NC_011761.1 identified by similarity to SP:P24189; match to protein family HMM PF01155; hydrogenase nickel incorporation protein HypA 643790 hypA-1 7134601 hypA-1 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase nickel incorporation protein HypA YP_002425205.1 643461 D 243159 CDS YP_002425206.1 218666244 7134795 643935..644708 1 NC_011761.1 identified by similarity to SP:P24190; match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 644708 hypB-1 7134795 hypB-1 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase nickel incorporation protein HypB YP_002425206.1 643935 D 243159 CDS YP_002425207.1 218666947 7136601 644734..646143 1 NC_011761.1 identified by match to protein family HMM PF00324; amino acid permease family protein 646143 7136601 AFE_0719 Acidithiobacillus ferrooxidans ATCC 23270 amino acid permease family protein YP_002425207.1 644734 D 243159 CDS YP_002425208.1 218665880 7134657 646208..647458 1 NC_011761.1 identified by match to protein family HMM PF01266; FAD-dependent oxidoreductase 647458 7134657 AFE_0720 Acidithiobacillus ferrooxidans ATCC 23270 FAD-dependent oxidoreductase YP_002425208.1 646208 D 243159 CDS YP_002425209.1 218665785 7135435 647543..647941 1 NC_011761.1 identified by similarity to PIR:A97389; hypothetical protein 647941 7135435 AFE_0721 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425209.1 647543 D 243159 CDS YP_002425210.1 218667526 7136100 complement(647956..649476) 1 NC_011761.1 identified by similarity to SP:P04968; match to protein family HMM PF00291; match to protein family HMM PF00585; match to protein family HMM TIGR01124; threonine ammonia-lyase, biosynthetic 649476 ilvA 7136100 ilvA Acidithiobacillus ferrooxidans ATCC 23270 threonine ammonia-lyase, biosynthetic YP_002425210.1 647956 R 243159 CDS YP_002425211.1 218666151 7136392 complement(649473..649844) 1 NC_011761.1 identified by match to protein family HMM PF00126; helix-turn-helix domain-containing protein 649844 7136392 AFE_0723 Acidithiobacillus ferrooxidans ATCC 23270 helix-turn-helix domain-containing protein YP_002425211.1 649473 R 243159 CDS YP_002425212.1 218665552 7134051 complement(649841..650806) 1 NC_011761.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 650806 7134051 AFE_0724 Acidithiobacillus ferrooxidans ATCC 23270 alpha/beta hydrolase YP_002425212.1 649841 R 243159 CDS YP_002425213.1 218668113 7135924 complement(650803..651012) 1 NC_011761.1 hypothetical protein 651012 7135924 AFE_0725 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425213.1 650803 R 243159 CDS YP_002425214.1 218665895 7136850 651358..652134 1 NC_011761.1 identified by similarity to GB:AAQ58336.1; hypothetical protein 652134 7136850 AFE_0726 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425214.1 651358 D 243159 CDS YP_002425215.1 218666074 7134105 652134..653033 1 NC_011761.1 identified by similarity to SP:Q59601; match to protein family HMM PF01553; match to protein family HMM TIGR00530; 1-acyl-sn-glycerol-3-phosphate acyltransferase 653033 7134105 AFE_0727 Acidithiobacillus ferrooxidans ATCC 23270 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002425215.1 652134 D 243159 CDS YP_002425216.1 218667464 7136994 complement(653053..654117) 1 NC_011761.1 identified by similarity to SP:P29680; match to protein family HMM PF01208; match to protein family HMM TIGR01464; uroporphyrinogen decarboxylase 654117 hemE 7136994 hemE Acidithiobacillus ferrooxidans ATCC 23270 uroporphyrinogen decarboxylase YP_002425216.1 653053 R 243159 CDS YP_002425217.1 218666446 7136755 complement(654121..655518) 1 NC_011761.1 identified by similarity to SP:P09832; match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01318; glutamate synthase, small subunit 655518 gltD 7136755 gltD Acidithiobacillus ferrooxidans ATCC 23270 glutamate synthase, small subunit YP_002425217.1 654121 R 243159 CDS YP_002425218.1 218667861 7134392 complement(655542..659969) 1 NC_011761.1 identified by similarity to SP:P09831; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase, large subunit 659969 gltB 7134392 gltB Acidithiobacillus ferrooxidans ATCC 23270 glutamate synthase, large subunit YP_002425218.1 655542 R 243159 CDS YP_002425219.1 218666601 7134939 complement(660107..661306) 1 NC_011761.1 identified by similarity to SP:Q8XV63; match to protein family HMM PF01966; match to protein family HMM TIGR01353; deoxyguanosinetriphosphate triphosphohydrolase 661306 7134939 AFE_0731 Acidithiobacillus ferrooxidans ATCC 23270 deoxyguanosinetriphosphate triphosphohydrolase YP_002425219.1 660107 R 243159 CDS YP_002425220.1 218666633 7135331 complement(661272..662072) 1 NC_011761.1 identified by match to protein family HMM PF02511; match to protein family HMM TIGR02170; thymidylate synthase, flavin-dependent 662072 thyX 7135331 thyX Acidithiobacillus ferrooxidans ATCC 23270 thymidylate synthase, flavin-dependent YP_002425220.1 661272 R 243159 CDS YP_002425221.1 218665639 7134504 complement(662107..663201) 1 NC_011761.1 identified by similarity to SP:P07639; match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 663201 aroB 7134504 aroB Acidithiobacillus ferrooxidans ATCC 23270 3-dehydroquinate synthase YP_002425221.1 662107 R 243159 CDS YP_002425222.1 218666988 7137122 complement(663307..663846) 1 NC_011761.1 identified by similarity to SP:P24167; match to protein family HMM PF01202; shikimate kinase 663846 aroK 7137122 aroK Acidithiobacillus ferrooxidans ATCC 23270 shikimate kinase YP_002425222.1 663307 R 243159 CDS YP_002425223.1 218665348 7134851 complement(663843..666197) 1 NC_011761.1 identified by similarity to SP:P34750; match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; match to protein family HMM TIGR02515; fimbrial assembly protein PilQ 666197 7134851 AFE_0735 Acidithiobacillus ferrooxidans ATCC 23270 fimbrial assembly protein PilQ YP_002425223.1 663843 R 243159 CDS YP_002425224.1 218665392 7136129 complement(666242..666790) 1 NC_011761.1 identified by similarity to GB:AAA93089.1; type 4 fimbrial biogenesis protein PilP 666790 7136129 AFE_0736 Acidithiobacillus ferrooxidans ATCC 23270 type 4 fimbrial biogenesis protein PilP YP_002425224.1 666242 R 243159 CDS YP_002425225.1 218666007 7136174 complement(666787..667440) 1 NC_011761.1 identified by match to protein family HMM PF04350; fimbrial assembly protein PilO 667440 7136174 AFE_0737 Acidithiobacillus ferrooxidans ATCC 23270 fimbrial assembly protein PilO YP_002425225.1 666787 R 243159 CDS YP_002425226.1 218666726 7134223 complement(667437..668030) 1 NC_011761.1 identified by match to protein family HMM PF05137; type IV pilus biogenesis protein PilN 668030 7134223 AFE_0738 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus biogenesis protein PilN YP_002425226.1 667437 R 243159 CDS YP_002425227.1 218667016 7137221 complement(668027..669091) 1 NC_011761.1 identified by similarity to PIR:S77726; match to protein family HMM TIGR01175; type IV pilus assembly protein PilM 669091 7137221 AFE_0739 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus assembly protein PilM YP_002425227.1 668027 R 243159 CDS YP_002425228.1 218665188 7134880 669137..669307 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 669307 7134880 AFE_0740 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425228.1 669137 D 243159 CDS YP_002425229.1 218665839 7135674 669319..669852 1 NC_011761.1 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase family protein 669852 7135674 AFE_0741 Acidithiobacillus ferrooxidans ATCC 23270 cytidine and deoxycytidylate deaminase family protein YP_002425229.1 669319 D 243159 CDS YP_002425230.1 218665367 7135393 669849..670280 1 NC_011761.1 identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149; hypothetical protein 670280 7135393 AFE_0742 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425230.1 669849 D 243159 CDS YP_002425231.1 218665982 7136149 670280..670705 1 NC_011761.1 hypothetical protein 670705 7136149 AFE_0743 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425231.1 670280 D 243159 CDS YP_002425232.1 218667855 7134196 670768..672306 1 NC_011761.1 identified by match to protein family HMM PF00488; MutS domain-containing protein 672306 7134196 AFE_0744 Acidithiobacillus ferrooxidans ATCC 23270 MutS domain-containing protein YP_002425232.1 670768 D 243159 CDS YP_002425233.1 218665725 7134933 672435..674180 1 NC_011761.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit 674180 ilvB 7134933 ilvB Acidithiobacillus ferrooxidans ATCC 23270 acetolactate synthase large subunit YP_002425233.1 672435 D 243159 CDS YP_002425234.1 218666346 7136040 674183..674668 1 NC_011761.1 identified by similarity to SP:P00894; match to protein family HMM PF01842; match to protein family HMM TIGR00119; acetolactate synthase small subunit 674668 ilvN 7136040 ilvN Acidithiobacillus ferrooxidans ATCC 23270 acetolactate synthase small subunit YP_002425234.1 674183 D 243159 CDS YP_002425235.1 218666084 7136485 674720..675736 1 NC_011761.1 identified by match to protein family HMM PF01450; match to protein family HMM PF02629; match to protein family HMM PF07991; match to protein family HMM TIGR00465; ketol-acid reductoisomerase 675736 ilvC 7136485 ilvC Acidithiobacillus ferrooxidans ATCC 23270 ketol-acid reductoisomerase YP_002425235.1 674720 D 243159 CDS YP_002425236.1 218665734 7137004 675855..676517 1 NC_011761.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 676517 psd 7137004 psd Acidithiobacillus ferrooxidans ATCC 23270 phosphatidylserine decarboxylase YP_002425236.1 675855 D 243159 CDS YP_002425237.1 218666418 7136049 676514..677266 1 NC_011761.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase 677266 pssA 7136049 pssA Acidithiobacillus ferrooxidans ATCC 23270 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_002425237.1 676514 D 243159 CDS YP_002425238.1 218667072 7134364 complement(677242..679095) 1 NC_011761.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 679095 7134364 AFE_0749 Acidithiobacillus ferrooxidans ATCC 23270 pyruvate kinase YP_002425238.1 677242 R 243159 CDS YP_002425239.1 218665615 7136672 679283..679708 1 NC_011761.1 identified by match to protein family HMM PF00582; universal stress family protein 679708 7136672 AFE_0751 Acidithiobacillus ferrooxidans ATCC 23270 universal stress family protein YP_002425239.1 679283 D 243159 CDS YP_002425240.1 218667013 7135558 complement(679797..680222) 1 NC_011761.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 680222 7135558 AFE_0752 Acidithiobacillus ferrooxidans ATCC 23270 7-cyano-7-deazaguanine reductase YP_002425240.1 679797 R 243159 CDS YP_002425241.1 218666509 7134877 680283..683735 1 NC_011761.1 identified by similarity to GB:CAD66591.1; match to protein family HMM PF02463; match to protein family HMM TIGR02168; chromosome segregation protein SMC 683735 smc 7134877 smc Acidithiobacillus ferrooxidans ATCC 23270 chromosome segregation protein SMC YP_002425241.1 680283 D 243159 CDS YP_002425242.1 218665468 7136321 683810..683962 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 683962 7136321 AFE_0754 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425242.1 683810 D 243159 CDS YP_002425243.1 218666949 7135081 683995..684963 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 684963 7135081 AFE_0755 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425243.1 683995 D 243159 CDS YP_002425244.1 218666002 7134659 complement(684969..685661) 1 NC_011761.1 identified by similarity to GB:AAN70712.1; match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490; HAD-superfamily hydrolase 685661 7134659 AFE_0756 Acidithiobacillus ferrooxidans ATCC 23270 HAD-superfamily hydrolase YP_002425244.1 684969 R 243159 CDS YP_002425245.1 218666742 7134217 685778..687793 1 NC_011761.1 identified by similarity to SP:P15042; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; NAD-dependent DNA ligase 687793 ligA 7134217 ligA Acidithiobacillus ferrooxidans ATCC 23270 NAD-dependent DNA ligase YP_002425245.1 685778 D 243159 CDS YP_002425246.1 218666362 7137237 687796..688311 1 NC_011761.1 identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 688311 7137237 AFE_0758 Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F1 subunit epsilon YP_002425246.1 687796 D 243159 CDS YP_002425247.1 218665099 7136502 688328..688978 1 NC_011761.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase 688978 7136502 AFE_0759 Acidithiobacillus ferrooxidans ATCC 23270 methyltransferase YP_002425247.1 688328 D 243159 CDS YP_002425248.1 218665029 7134250 complement(689122..689856) 1 NC_011761.1 identified by similarity to PIR:A64695; match to protein family HMM PF01863; hypothetical protein 689856 7134250 AFE_0760 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425248.1 689122 R 243159 CDS YP_002425249.1 218667865 7134957 689944..690111 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 690111 7134957 AFE_0762 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425249.1 689944 D 243159 CDS YP_002425250.1 218667339 7134943 complement(690101..691051) 1 NC_011761.1 identified by similarity to GB:AAK50330.1; match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 691051 7134943 AFE_0761 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002425250.1 690101 R 243159 CDS YP_002425251.1 218666870 7135184 691285..693621 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 693621 7135184 AFE_0763 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002425251.1 691285 D 243159 CDS YP_002425252.1 218665563 7137119 693860..694654 1 NC_011761.1 identified by similarity to GB:AAQ58180.1; match to protein family HMM PF01925; hypothetical protein 694654 7137119 AFE_0764 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425252.1 693860 D 243159 CDS YP_002425253.1 218666263 7135935 694773..694886 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 694886 7135935 AFE_0765 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425253.1 694773 D 243159 CDS YP_002425254.1 218666991 7136620 695116..695229 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 695229 7136620 AFE_0766 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425254.1 695116 D 243159 CDS YP_002425255.1 218668056 7134854 695199..695345 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 695345 7134854 AFE_0767 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425255.1 695199 D 243159 CDS YP_002425256.1 218665860 7136791 695389..696093 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 696093 7136791 AFE_0768 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002425256.1 695389 D 243159 CDS YP_002425257.1 218665542 7135415 696141..696539 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 696539 7135415 AFE_0769 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002425257.1 696141 D 243159 CDS YP_002425258.1 218665656 7135914 696716..697387 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 697387 7135914 AFE_0770 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002425258.1 696716 D 243159 CDS YP_002425259.1 218665277 7137139 697445..698869 1 NC_011761.1 identified by match to protein family HMM PF02133; cytosine/purines/uracil/thiamine/allantoin permease family protein 698869 7137139 AFE_0771 Acidithiobacillus ferrooxidans ATCC 23270 cytosine/purines/uracil/thiamine/allantoin permease family protein YP_002425259.1 697445 D 243159 CDS YP_002425260.1 218667493 7136218 698866..700095 1 NC_011761.1 identified by similarity to SP:P76641; match to protein family HMM PF01979; guanine deaminase 700095 7136218 AFE_0772 Acidithiobacillus ferrooxidans ATCC 23270 guanine deaminase YP_002425260.1 698866 D 243159 CDS YP_002425261.1 218666581 7136787 700142..701185 1 NC_011761.1 identified by similarity to SP:P22333; match to protein family HMM PF00962; match to protein family HMM TIGR01430; adenosine deaminase 701185 add 7136787 add Acidithiobacillus ferrooxidans ATCC 23270 adenosine deaminase YP_002425261.1 700142 D 243159 CDS YP_002425262.1 218668100 7135311 701209..702210 1 NC_011761.1 phosphorylase 702210 7135311 AFE_0774 Acidithiobacillus ferrooxidans ATCC 23270 phosphorylase YP_002425262.1 701209 D 243159 CDS YP_002425263.1 218666367 7136836 702272..704530 1 NC_011761.1 identified by similarity to SP:Q46799; match to protein family HMM PF01315; match to protein family HMM PF02738; xanthine dehydrogenase, molybdenum-binding subunit 704530 7136836 AFE_0775 Acidithiobacillus ferrooxidans ATCC 23270 xanthine dehydrogenase, molybdenum-binding subunit YP_002425263.1 702272 D 243159 CDS YP_002425264.1 218665481 7136507 704533..704982 1 NC_011761.1 identified by similarity to SP:P77165; match to protein family HMM PF00111; match to protein family HMM PF01799; xanthine dehydrogenase, iron-sulfur binding subunit 704982 7136507 AFE_0776 Acidithiobacillus ferrooxidans ATCC 23270 xanthine dehydrogenase, iron-sulfur binding subunit YP_002425264.1 704533 D 243159 CDS YP_002425265.1 218667839 7135094 704982..705848 1 NC_011761.1 identified by similarity to SP:Q8X6C5; match to protein family HMM PF00941; xanthine dehydrogenase, FAD-binding protein 705848 7135094 AFE_0777 Acidithiobacillus ferrooxidans ATCC 23270 xanthine dehydrogenase, FAD-binding protein YP_002425265.1 704982 D 243159 CDS YP_002425266.1 218668059 7134917 705852..706436 1 NC_011761.1 hypothetical protein 706436 7134917 AFE_0778 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425266.1 705852 D 243159 CDS YP_002425267.1 218667357 7136794 706455..707546 1 NC_011761.1 identified by similarity to SP:O87589; match to protein family HMM TIGR02714; cyanuric acid amidohydrolase 707546 7136794 AFE_0779 Acidithiobacillus ferrooxidans ATCC 23270 cyanuric acid amidohydrolase YP_002425267.1 706455 D 243159 CDS YP_002425268.1 218665861 7136879 707543..708484 1 NC_011761.1 identified by similarity to GB:CAB41849.1; match to protein family HMM PF02625; xanthine dehydrogenase accessory factor 708484 7136879 AFE_0780 Acidithiobacillus ferrooxidans ATCC 23270 xanthine dehydrogenase accessory factor YP_002425268.1 707543 D 243159 CDS YP_002425269.1 218666759 7135416 708501..708701 1 NC_011761.1 hypothetical protein 708701 7135416 AFE_0781 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425269.1 708501 D 243159 CDS YP_002425270.1 218666192 7137254 708698..710095 1 NC_011761.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR02715; amidohydrolase, AtzE family 710095 7137254 AFE_0782 Acidithiobacillus ferrooxidans ATCC 23270 amidohydrolase, AtzE family YP_002425270.1 708698 D 243159 CDS YP_002425271.1 218665534 7134093 710055..710495 1 NC_011761.1 identified by similarity to PIR:AD0396; hypothetical protein 710495 7134093 AFE_0783 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425271.1 710055 D 243159 CDS YP_002425272.1 218666861 7135905 710504..711112 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 711112 7135905 AFE_0784 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425272.1 710504 D 243159 CDS YP_002425273.1 218667771 7137110 711109..712728 1 NC_011761.1 identified by match to protein family HMM PF01019; match to protein family HMM TIGR00066; gamma-glutamyltranspeptidase 712728 ggt 7137110 ggt Acidithiobacillus ferrooxidans ATCC 23270 gamma-glutamyltranspeptidase YP_002425273.1 711109 D 243159 CDS YP_002425274.1 218665117 7134446 complement(713160..713681) 1 NC_011761.1 identified by similarity to GB:AAG23392.1; match to protein family HMM PF01243; heme-utilization protein HutZ 713681 7134446 AFE_0786 Acidithiobacillus ferrooxidans ATCC 23270 heme-utilization protein HutZ YP_002425274.1 713160 R 243159 CDS YP_002425275.1 218665605 7134268 713734..714783 1 NC_011761.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 714783 7134268 AFE_0787 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide deacetylase family protein YP_002425275.1 713734 D 243159 CDS YP_002425276.1 218666522 7135548 714875..716194 1 NC_011761.1 identified by similarity to GB:AAK81830.1; match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF04820; non-heme halogenase 716194 7135548 AFE_0788 Acidithiobacillus ferrooxidans ATCC 23270 non-heme halogenase YP_002425276.1 714875 D 243159 CDS YP_002425277.1 218665849 7136334 716197..717270 1 NC_011761.1 identified by similarity to PIR:T30234; match to protein family HMM PF01042; dioxygenase 717270 7136334 AFE_0789 Acidithiobacillus ferrooxidans ATCC 23270 dioxygenase YP_002425277.1 716197 D 243159 CDS YP_002425278.1 218665197 7135404 717267..718070 1 NC_011761.1 identified by match to protein family HMM PF01553; acyltransferase 718070 7135404 AFE_0790 Acidithiobacillus ferrooxidans ATCC 23270 acyltransferase YP_002425278.1 717267 D 243159 CDS YP_002425279.1 218666683 7135684 718067..718828 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 718828 7135684 AFE_0792 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002425279.1 718067 D 243159 CDS YP_002425280.1 218667436 7134554 complement(718810..720156) 1 NC_011761.1 identified by match to protein family HMM PF00999; Na+/H+ antiporter 720156 7134554 AFE_0791 Acidithiobacillus ferrooxidans ATCC 23270 Na+/H+ antiporter YP_002425280.1 718810 R 243159 CDS YP_002425281.1 218665992 7136725 complement(720172..720894) 1 NC_011761.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 720894 fabG 7136725 fabG Acidithiobacillus ferrooxidans ATCC 23270 3-ketoacyl-ACP reductase YP_002425281.1 720172 R 243159 CDS YP_002425282.1 218666226 7134206 complement(720887..721387) 1 NC_011761.1 identified by similarity to GB:CAD13953.1; hypothetical protein 721387 7134206 AFE_0794 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425282.1 720887 R 243159 CDS YP_002425283.1 218666885 7136583 complement(721378..722193) 1 NC_011761.1 identified by similarity to GB:AAM43220.1; hypothetical protein 722193 7136583 AFE_0795 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425283.1 721378 R 243159 CDS YP_002425284.1 218668137 7134595 complement(722206..723399) 1 NC_011761.1 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 723399 7134595 AFE_0796 Acidithiobacillus ferrooxidans ATCC 23270 3-oxoacyl-ACP synthase YP_002425284.1 722206 R 243159 CDS YP_002425285.1 218665642 7135956 723703..723969 1 NC_011761.1 identified by similarity to SP:O67611; acyl carrier protein 723969 7135956 AFE_0797 Acidithiobacillus ferrooxidans ATCC 23270 acyl carrier protein YP_002425285.1 723703 D 243159 CDS YP_002425286.1 218665795 7137125 complement(724043..726397) 1 NC_011761.1 hypothetical protein 726397 7137125 AFE_0798 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425286.1 724043 R 243159 CDS YP_002425287.1 218666673 7136110 complement(726394..726954) 1 NC_011761.1 identified by similarity to GB:CAD13958.1; hypothetical protein 726954 7136110 AFE_0799 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425287.1 726394 R 243159 CDS YP_002425288.1 218668002 7134544 complement(727128..727976) 1 NC_011761.1 identified by similarity to GB:CAD13959.1; hypothetical protein 727976 7134544 AFE_0800 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425288.1 727128 R 243159 CDS YP_002425289.1 218665517 7134766 complement(728048..728278) 1 NC_011761.1 identified by similarity to GB:CAD13960.1; hypothetical protein 728278 7134766 AFE_0801 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425289.1 728048 R 243159 CDS YP_002425290.1 218666194 7135888 complement(728355..729716) 1 NC_011761.1 identified by match to protein family HMM PF00501; AMP-binding protein 729716 7135888 AFE_0802 Acidithiobacillus ferrooxidans ATCC 23270 AMP-binding protein YP_002425290.1 728355 R 243159 CDS YP_002425291.1 218667713 7134095 complement(729744..730439) 1 NC_011761.1 identified by similarity to GB:CAD13961.1; hypothetical protein 730439 7134095 AFE_0803 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425291.1 729744 R 243159 CDS YP_002425292.1 218666843 7135496 complement(730635..730967) 1 NC_011761.1 hypothetical protein 730967 7135496 AFE_0804 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425292.1 730635 R 243159 CDS YP_002425293.1 218665056 7137092 complement(731093..732637) 1 NC_011761.1 identified by match to protein family HMM PF03321; auxin-responsive GH3-like protein 732637 7137092 AFE_0805 Acidithiobacillus ferrooxidans ATCC 23270 auxin-responsive GH3-like protein YP_002425293.1 731093 R 243159 CDS YP_002425294.1 218666599 7134985 complement(732634..735042) 1 NC_011761.1 identified by match to protein family HMM PF01804; penicillin amidase family protein 735042 7134985 AFE_0806 Acidithiobacillus ferrooxidans ATCC 23270 penicillin amidase family protein YP_002425294.1 732634 R 243159 CDS YP_002425295.1 218667987 7135329 735031..735168 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 735168 7135329 AFE_0807 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425295.1 735031 D 243159 CDS YP_002425296.1 218665536 7134751 complement(735209..736258) 1 NC_011761.1 identified by similarity to SP:P77324; match to protein family HMM PF00941; match to protein family HMM PF03450; oxidoreductase, FAD-binding subunit 736258 7134751 AFE_0808 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, FAD-binding subunit YP_002425296.1 735209 R 243159 CDS YP_002425297.1 218665591 7135908 complement(736258..738606) 1 NC_011761.1 identified by match to protein family HMM PF01315; match to protein family HMM PF02738; oxidoreductase, molybdopterin binding subunit 738606 7135908 AFE_0809 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, molybdopterin binding subunit YP_002425297.1 736258 R 243159 CDS YP_002425298.1 218666237 7135534 complement(738609..739136) 1 NC_011761.1 identified by similarity to SP:P19921; match to protein family HMM PF00111; match to protein family HMM PF01799; oxidoreductase, iron-sulfur binding subunit 739136 7135534 AFE_0810 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, iron-sulfur binding subunit YP_002425298.1 738609 R 243159 CDS YP_002425299.1 218666900 7136594 739221..739349 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 739349 7136594 AFE_0811 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425299.1 739221 D 243159 CDS YP_002425300.1 218667325 7134610 complement(739384..739593) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 739593 7134610 AFE_0812 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425300.1 739384 R 243159 CDS YP_002425301.1 218666668 7135169 complement(739817..741214) 1 NC_011761.1 identified by match to protein family HMM PF07690; major facilitator family transporter 741214 7135169 AFE_0813 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002425301.1 739817 R 243159 CDS YP_002425302.1 218666886 7134539 complement(741520..742905) 1 NC_011761.1 identified by match to protein family HMM PF00654; voltage-gated chloride channel 742905 7134539 AFE_0814 Acidithiobacillus ferrooxidans ATCC 23270 voltage-gated chloride channel YP_002425302.1 741520 R 243159 CDS YP_002425303.1 218667253 7134596 complement(742919..744691) 1 NC_011761.1 identified by match to protein family HMM PF00571; match to protein family HMM PF00654; voltage-gated chloride channel 744691 7134596 AFE_0815 Acidithiobacillus ferrooxidans ATCC 23270 voltage-gated chloride channel YP_002425303.1 742919 R 243159 CDS YP_002425304.1 218666295 7135647 744862..745752 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 745752 7135647 AFE_0817 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002425304.1 744862 D 243159 CDS YP_002425305.1 218666036 7137303 complement(745736..745876) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 745876 7137303 AFE_0816 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425305.1 745736 R 243159 CDS YP_002425306.1 218665716 7136956 complement(745902..748331) 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01647; plasma-membrane proton-efflux P-type ATPase 748331 7136956 AFE_0818 Acidithiobacillus ferrooxidans ATCC 23270 plasma-membrane proton-efflux P-type ATPase YP_002425306.1 745902 R 243159 CDS YP_002425307.1 218666882 7137199 748692..748853 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 748853 7137199 AFE_0819 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425307.1 748692 D 243159 CDS YP_002425308.1 218666831 7134592 complement(749367..749567) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 749567 7134592 AFE_0820 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425308.1 749367 R 243159 CDS YP_002425309.1 218667407 7137080 complement(749485..749961) 1 NC_011761.1 hypothetical protein 749961 7137080 AFE_0821 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425309.1 749485 R 243159 CDS YP_002425310.1 218665067 7136931 749954..750226 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 750226 7136931 AFE_0823 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425310.1 749954 D 243159 CDS YP_002425311.1 218666421 7134996 complement(750211..750522) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 750522 7134996 AFE_0822 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425311.1 750211 R 243159 CDS YP_002425312.1 218667130 7134367 complement(750515..750805) 1 NC_011761.1 hypothetical protein 750805 7134367 AFE_0824 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425312.1 750515 R 243159 CDS YP_002425313.1 218667076 7134677 750844..750993 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 750993 7134677 AFE_0825 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425313.1 750844 D 243159 CDS YP_002425314.1 218666139 7136676 751066..752628 1 NC_011761.1 identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 752628 7136676 AFE_0826 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, M subunit YP_002425314.1 751066 D 243159 CDS YP_002425315.1 218666846 7134039 752625..754205 1 NC_011761.1 identified by similarity to SP:O50224; ATP-dependent DNA helicase 754205 7134039 AFE_0827 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase YP_002425315.1 752625 D 243159 CDS YP_002425316.1 218666986 7137095 754202..755269 1 NC_011761.1 identified by similarity to GB:AAM31899.1; hypothetical protein 755269 7137095 AFE_0828 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425316.1 754202 D 243159 CDS YP_002425317.1 218665757 7134849 755229..756458 1 NC_011761.1 identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 756458 7134849 AFE_0829 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system subunit S YP_002425317.1 755229 D 243159 CDS YP_002425318.1 218665039 7136072 756547..757095 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 757095 7136072 AFE_0831 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425318.1 756547 D 243159 CDS YP_002425319.1 218666776 7134968 complement(757067..757255) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 757255 7134968 AFE_0830 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425319.1 757067 R 243159 CDS YP_002425320.1 218667737 7137272 757229..758089 1 NC_011761.1 hypothetical protein 758089 7137272 AFE_0832 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425320.1 757229 D 243159 CDS YP_002425321.1 218666952 7135520 complement(758164..759162) 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 759162 7135520 AFE_0833 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425321.1 758164 R 243159 CDS YP_002425322.1 218667691 7134662 complement(759155..760096) 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 760096 7134662 AFE_0834 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425322.1 759155 R 243159 CDS YP_002425323.1 218666400 7135474 complement(760093..761337) 1 NC_011761.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase, phage integrase family 761337 7135474 AFE_0835 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425323.1 760093 R 243159 CDS YP_002425324.1 218667086 7134344 761560..762087 1 NC_011761.1 identified by similarity to GB:AAK47199.1; transposase, degenerate 762087 7134344 AFE_0836 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002425324.1 761560 D 243159 CDS YP_002425325.1 218667781 7136686 762091..762930 1 NC_011761.1 identified by similarity to SP:P45754; general secretion pathway protein A 762930 7136686 AFE_0837 Acidithiobacillus ferrooxidans ATCC 23270 general secretion pathway protein A YP_002425325.1 762091 D 243159 CDS YP_002425326.1 218666402 7134456 762941..763144 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 763144 7134456 AFE_0838 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425326.1 762941 D 243159 CDS YP_002425327.1 218667820 7134346 complement(763384..763509) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 763509 7134346 AFE_0839 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425327.1 763384 R 243159 CDS YP_002425328.1 218667154 7134495 763539..766352 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 766352 7134495 AFE_0840 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425328.1 763539 D 243159 CDS YP_002425329.1 218666256 7134702 766358..769279 1 NC_011761.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction-modification system, R subunit 769279 7134702 AFE_0841 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, R subunit YP_002425329.1 766358 D 243159 CDS YP_002425330.1 218665731 7136613 769297..769632 1 NC_011761.1 identified by similarity to PIR:B82823; match to protein family HMM PF01863; hypothetical protein 769632 7136613 AFE_0842 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425330.1 769297 D 243159 CDS YP_002425331.1 218665415 7136046 complement(769808..770032) 1 NC_011761.1 hypothetical protein 770032 7136046 AFE_0843 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425331.1 769808 R 243159 CDS YP_002425332.1 218667550 7136006 770300..772327 1 NC_011761.1 identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM TIGR00631; excinuclease ABC subunit B 772327 uvrB 7136006 uvrB Acidithiobacillus ferrooxidans ATCC 23270 excinuclease ABC subunit B YP_002425332.1 770300 D 243159 CDS YP_002425333.1 218667309 7136416 772432..773481 1 NC_011761.1 identified by similarity to SP:P75691; match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-containing alcohol dehydrogenase 773481 7136416 AFE_0846 Acidithiobacillus ferrooxidans ATCC 23270 zinc-containing alcohol dehydrogenase YP_002425333.1 772432 D 243159 CDS YP_002425334.1 218666236 7135153 773696..775333 1 NC_011761.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 775333 pyrG 7135153 pyrG Acidithiobacillus ferrooxidans ATCC 23270 CTP synthetase YP_002425334.1 773696 D 243159 CDS YP_002425335.1 218665807 7136593 775330..776175 1 NC_011761.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 776175 kdsA 7136593 kdsA Acidithiobacillus ferrooxidans ATCC 23270 2-dehydro-3-deoxyphosphooctonate aldolase YP_002425335.1 775330 D 243159 CDS YP_002425336.1 218667583 7135361 776172..777452 1 NC_011761.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 777452 eno 7135361 eno Acidithiobacillus ferrooxidans ATCC 23270 phosphopyruvate hydratase YP_002425336.1 776172 D 243159 CDS YP_002425337.1 218665307 7135754 777406..777873 1 NC_011761.1 identified by match to protein family HMM PF04977; septum formation initiator family protein 777873 7135754 AFE_0850 Acidithiobacillus ferrooxidans ATCC 23270 septum formation initiator family protein YP_002425337.1 777406 D 243159 CDS YP_002425338.1 218665422 7136248 complement(777927..778487) 1 NC_011761.1 identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 778487 efp 7136248 efp Acidithiobacillus ferrooxidans ATCC 23270 translation elongation factor P YP_002425338.1 777927 R 243159 CDS YP_002425339.1 218666640 7135034 778578..778880 1 NC_011761.1 identified by similarity to GB:CAD13985.1; match to protein family HMM PF06155; hypothetical protein 778880 7135034 AFE_0852 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425339.1 778578 D 243159 CDS YP_002425340.1 218667420 7134511 778958..780784 1 NC_011761.1 identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 780784 uvrC 7134511 uvrC Acidithiobacillus ferrooxidans ATCC 23270 excinuclease ABC subunit C YP_002425340.1 778958 D 243159 CDS YP_002425341.1 218666457 7136944 780787..781377 1 NC_011761.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 781377 pgsA 7136944 pgsA Acidithiobacillus ferrooxidans ATCC 23270 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002425341.1 780787 D 243159 CDS YP_002425342.1 218665508 7136000 781692..782381 1 NC_011761.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; CarD family transcriptional regulator 782381 7136000 AFE_0857 Acidithiobacillus ferrooxidans ATCC 23270 CarD family transcriptional regulator YP_002425342.1 781692 D 243159 CDS YP_002425343.1 218666775 7135879 complement(782410..782802) 1 NC_011761.1 identified by similarity to GB:CAE33148.1; hypothetical protein 782802 7135879 AFE_0858 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425343.1 782410 R 243159 CDS YP_002425344.1 218667271 7137271 complement(782846..784057) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 784057 7137271 AFE_0859 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002425344.1 782846 R 243159 CDS YP_002425345.1 218668171 7135114 complement(784139..785122) 1 NC_011761.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding 785122 7135114 AFE_0860 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein/oxidoreductase, FAD/NAD-binding YP_002425345.1 784139 R 243159 CDS YP_002425346.1 218666671 7135990 complement(785186..785647) 1 NC_011761.1 identified by match to protein family HMM PF00042; globin domain-containing protein 785647 7135990 AFE_0861 Acidithiobacillus ferrooxidans ATCC 23270 globin domain-containing protein YP_002425346.1 785186 R 243159 CDS YP_002425347.1 218667019 7134542 complement(785774..786937) 1 NC_011761.1 identified by match to protein family HMM PF00529; drug resistance transporter 786937 7134542 AFE_0862 Acidithiobacillus ferrooxidans ATCC 23270 drug resistance transporter YP_002425347.1 785774 R 243159 CDS YP_002425348.1 218666545 7134883 complement(786940..788373) 1 NC_011761.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; RND efflux system, drug efflux transporter outer membrane lipoprotein 788373 7134883 AFE_0863 Acidithiobacillus ferrooxidans ATCC 23270 RND efflux system, drug efflux transporter outer membrane lipoprotein YP_002425348.1 786940 R 243159 CDS YP_002425349.1 218665661 7136357 complement(788373..789917) 1 NC_011761.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 789917 7136357 AFE_0864 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002425349.1 788373 R 243159 CDS YP_002425350.1 218667580 7137144 790023..790946 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 790946 7137144 AFE_0866 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002425350.1 790023 D 243159 CDS YP_002425351.1 218667093 7135751 complement(790943..791209) 1 NC_011761.1 identified by similarity to PIR:F70416; hypothetical protein 791209 7135751 AFE_0865 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425351.1 790943 R 243159 CDS YP_002425352.1 218665899 7136693 complement(791272..791496) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 791496 7136693 AFE_0867 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425352.1 791272 R 243159 CDS YP_002425353.1 218667933 7134772 792363..792605 1 NC_011761.1 identified by match to protein family HMM PF02604; match to protein family HMM TIGR01552; addiction module antitoxin, Axe family 792605 7134772 AFE_0869 Acidithiobacillus ferrooxidans ATCC 23270 addiction module antitoxin, Axe family YP_002425353.1 792363 D 243159 CDS YP_002425354.1 218667345 7135240 792602..792865 1 NC_011761.1 identified by similarity to GB:CAD85263.1; match to protein family HMM TIGR02116; Txe/YoeB family addiction module toxin 792865 7135240 AFE_0870 Acidithiobacillus ferrooxidans ATCC 23270 Txe/YoeB family addiction module toxin YP_002425354.1 792602 D 243159 CDS YP_002425355.1 218666190 7135190 793071..793475 1 NC_011761.1 identified by similarity to GB:CAE31747.1; match to protein family HMM PF00011; heat shock protein, Hsp20 family 793475 7135190 AFE_0871 Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein, Hsp20 family YP_002425355.1 793071 D 243159 CDS YP_002425356.1 218666950 7134091 793472..795838 1 NC_011761.1 identified by similarity to SP:P36772; match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 795838 lon-2 7134091 lon-2 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent protease La YP_002425356.1 793472 D 243159 CDS YP_002425357.1 218665672 7134660 complement(795942..796250) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 796250 7134660 AFE_0873 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425357.1 795942 R 243159 CDS YP_002425358.1 218667618 7134960 complement(797107..797583) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 797583 7134960 AFE_0875 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002425358.1 797107 R 243159 CDS YP_002425359.1 218667965 7135792 complement(797789..798466) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 798466 7135792 AFE_0876 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425359.1 797789 R 243159 CDS YP_002425360.1 218667496 7134359 complement(798852..799364) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 799364 7134359 AFE_0878 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002425360.1 798852 R 243159 CDS YP_002425361.1 218666069 7136361 complement(799956..800627) 1 NC_011761.1 identified by match to protein family HMM PF00126; LysR family transcriptional regulator 800627 7136361 AFE_0879 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002425361.1 799956 R 243159 CDS YP_002425362.1 218666450 7135011 801528..802106 1 NC_011761.1 identified by similarity to GB:BAC62652.1; hypothetical protein 802106 7135011 AFE_0881 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425362.1 801528 D 243159 CDS YP_002425363.1 218667083 7134396 802103..803266 1 NC_011761.1 identified by similarity to SP:P40974; match to protein family HMM PF01266; flavin monoamine oxidase family protein 803266 7134396 AFE_0882 Acidithiobacillus ferrooxidans ATCC 23270 flavin monoamine oxidase family protein YP_002425363.1 802103 D 243159 CDS YP_002425364.1 218667810 7136683 803263..803382 1 NC_011761.1 identified by similarity to GB:BAC19717.1; hypothetical protein 803382 7136683 AFE_0883 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425364.1 803263 D 243159 CDS YP_002425365.1 218666176 7135332 complement(803716..803820) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 803820 7135332 AFE_0885 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425365.1 803716 R 243159 CDS YP_002425366.1 218667326 7134186 804368..804661 1 NC_011761.1 identified by similarity to SP:Q97AY8; match to protein family HMM PF01906; hypothetical protein 804661 7134186 AFE_0888 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425366.1 804368 D 243159 CDS YP_002425367.1 218666465 7135170 complement(804656..804823) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 804823 7135170 AFE_0887 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425367.1 804656 R 243159 CDS YP_002425368.1 218667173 7134411 804909..805163 1 NC_011761.1 identified by similarity to GB:AAC84003.1; match to protein family HMM PF02604; stability protein StbD 805163 7134411 AFE_0889 Acidithiobacillus ferrooxidans ATCC 23270 stability protein StbD YP_002425368.1 804909 D 243159 CDS YP_002425369.1 218665915 7134722 805153..805434 1 NC_011761.1 identified by similarity to GB:AAC84004.1; match to protein family HMM PF05016; match to protein family HMM TIGR02385; stability protein StbE 805434 7134722 AFE_0890 Acidithiobacillus ferrooxidans ATCC 23270 stability protein StbE YP_002425369.1 805153 D 243159 CDS YP_002425370.1 218667536 7135850 complement(805977..807200) 1 NC_011761.1 identified by similarity to GB:AAO53956.1; match to protein family HMM PF02475; match to protein family HMM PF05175; hypothetical protein 807200 7135850 AFE_0892 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425370.1 805977 R 243159 CDS YP_002425371.1 218665258 7136402 807355..808407 1 NC_011761.1 identified by match to protein family HMM PF01008; match to protein family HMM TIGR00512; match to protein family HMM TIGR00524; aIF-2BI family translation initiation factor 808407 eiF2B 7136402 eiF2B Acidithiobacillus ferrooxidans ATCC 23270 aIF-2BI family translation initiation factor YP_002425371.1 807355 D 243159 CDS YP_002425372.1 218666147 7137036 808464..811001 1 NC_011761.1 identified by similarity to SP:P09097; match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 811001 gyrA 7137036 gyrA Acidithiobacillus ferrooxidans ATCC 23270 DNA gyrase subunit A YP_002425372.1 808464 D 243159 CDS YP_002425373.1 218665691 7134047 811009..812097 1 NC_011761.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 812097 serC 7134047 serC Acidithiobacillus ferrooxidans ATCC 23270 phosphoserine aminotransferase YP_002425373.1 811009 D 243159 CDS YP_002425374.1 218667460 7137174 812109..813692 1 NC_011761.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 813692 serA 7137174 serA Acidithiobacillus ferrooxidans ATCC 23270 D-3-phosphoglycerate dehydrogenase YP_002425374.1 812109 D 243159 CDS YP_002425375.1 218665183 7136751 813689..814765 1 NC_011761.1 identified by similarity to SP:P27603; match to protein family HMM PF00800; match to protein family HMM PF01817; match to protein family HMM PF01842; match to protein family HMM TIGR01807; chorismate mutase/prephenate dehydratase 814765 pheA 7136751 pheA Acidithiobacillus ferrooxidans ATCC 23270 chorismate mutase/prephenate dehydratase YP_002425375.1 813689 D 243159 CDS YP_002425376.1 218665830 7135669 814767..815864 1 NC_011761.1 identified by similarity to SP:P17731; match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM TIGR01141; histidinol-phosphate aminotransferase 815864 hisC-2 7135669 hisC-2 Acidithiobacillus ferrooxidans ATCC 23270 histidinol-phosphate aminotransferase YP_002425376.1 814767 D 243159 CDS YP_002425377.1 218667571 7135384 815869..816885 1 NC_011761.1 identified by match to protein family HMM PF00793; match to protein family HMM TIGR01361; phospho-2-dehydro-3-deoxyheptonate aldolase 816885 7135384 AFE_0899 Acidithiobacillus ferrooxidans ATCC 23270 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002425377.1 815869 D 243159 CDS YP_002425378.1 218665535 7136437 816857..817762 1 NC_011761.1 identified by similarity to SP:P20692; match to protein family HMM PF02153; prephenate dehydrogenase 817762 tyrA 7136437 tyrA Acidithiobacillus ferrooxidans ATCC 23270 prephenate dehydrogenase YP_002425378.1 816857 D 243159 CDS YP_002425379.1 218665371 7135906 817766..819067 1 NC_011761.1 identified by similarity to SP:P20691; match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 819067 aroA 7135906 aroA Acidithiobacillus ferrooxidans ATCC 23270 3-phosphoshikimate 1-carboxyvinyltransferase YP_002425379.1 817766 D 243159 CDS YP_002425380.1 218665811 7136153 819064..819744 1 NC_011761.1 identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 819744 cmk 7136153 cmk Acidithiobacillus ferrooxidans ATCC 23270 cytidylate kinase YP_002425380.1 819064 D 243159 CDS YP_002425381.1 218667071 7135365 819822..821528 1 NC_011761.1 identified by similarity to SP:P02349; match to protein family HMM PF00575; match to protein family HMM TIGR00717; 30S ribosomal protein S1 821528 rpsA 7135365 rpsA Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S1 YP_002425381.1 819822 D 243159 CDS YP_002425382.1 218665357 7136671 complement(821549..821653) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 821653 7136671 AFE_0904 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425382.1 821549 R 243159 CDS YP_002425383.1 218667528 7136139 821685..821990 1 NC_011761.1 identified by match to protein family HMM PF00216; match to protein family HMM TIGR00988; integration host factor subunit beta 821990 ihfB 7136139 ihfB Acidithiobacillus ferrooxidans ATCC 23270 integration host factor subunit beta YP_002425383.1 821685 D 243159 CDS YP_002425384.1 218666229 7136394 822007..823161 1 NC_011761.1 identified by similarity to SP:P45576; hypothetical protein 823161 7136394 AFE_0906 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425384.1 822007 D 243159 CDS YP_002425385.1 218665524 7136586 823149..823880 1 NC_011761.1 identified by similarity to SP:Q59654; match to protein family HMM PF00215; match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase 823880 pyrF 7136586 pyrF Acidithiobacillus ferrooxidans ATCC 23270 orotidine 5'-phosphate decarboxylase YP_002425385.1 823149 D 243159 CDS YP_002425386.1 218666186 7135895 823965..824534 1 NC_011761.1 identified by similarity to SP:Q60016; match to protein family HMM PF00156; match to protein family HMM TIGR01367; orotate phosphoribosyltransferase 824534 pyrE 7135895 pyrE Acidithiobacillus ferrooxidans ATCC 23270 orotate phosphoribosyltransferase YP_002425386.1 823965 D 243159 CDS YP_002425387.1 218665513 7134087 824587..825891 1 NC_011761.1 identified by similarity to SP:P22257; match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 825891 tig 7134087 tig Acidithiobacillus ferrooxidans ATCC 23270 trigger factor YP_002425387.1 824587 D 243159 CDS YP_002425388.1 218667656 7135884 825937..826581 1 NC_011761.1 identified by similarity to SP:P19245; match to protein family HMM PF00574; match to protein family HMM TIGR00493; ATP-dependent Clp protease, proteolytic subunit ClpP 826581 clpP 7135884 clpP Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent Clp protease, proteolytic subunit ClpP YP_002425388.1 825937 D 243159 CDS YP_002425389.1 218666382 7135357 826600..827871 1 NC_011761.1 identified by similarity to SP:P33138; match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382; ATP-dependent Clp protease ATP-binding subunit ClpX 827871 clpX 7135357 clpX Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent Clp protease ATP-binding subunit ClpX YP_002425389.1 826600 D 243159 CDS YP_002425390.1 218667386 7136522 828005..830395 1 NC_011761.1 identified by similarity to SP:P08177; match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; ATP-dependent protease La 830395 lon-1 7136522 lon-1 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent protease La YP_002425390.1 828005 D 243159 CDS YP_002425391.1 218667917 7136908 complement(830411..830539) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 830539 7136908 AFE_0913 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425391.1 830411 R 243159 CDS YP_002425392.1 218666540 7135224 830639..830911 1 NC_011761.1 identified by similarity to SP:P02341; match to protein family HMM PF00216; DNA-binding protein HU 830911 hup 7135224 hup Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein HU YP_002425392.1 830639 D 243159 CDS YP_002425393.1 218666935 7135774 complement(832835..833437) 1 NC_011761.1 identified by match to protein family HMM PF01569; PAP2 family protein 833437 7135774 AFE_0918 Acidithiobacillus ferrooxidans ATCC 23270 PAP2 family protein YP_002425393.1 832835 R 243159 CDS YP_002425394.1 218667966 7134645 complement(833449..834090) 1 NC_011761.1 identified by similarity to GB:CAD14235.1; hypothetical protein 834090 7134645 AFE_0919 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425394.1 833449 R 243159 CDS YP_002425395.1 218667514 7135273 834332..835702 1 NC_011761.1 metal ion transporter NRAMP family 835702 7135273 AFE_0920 Acidithiobacillus ferrooxidans ATCC 23270 metal ion transporter NRAMP family YP_002425395.1 834332 D 243159 CDS YP_002425396.1 218665451 7136379 835713..835913 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 835913 7136379 AFE_0921 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425396.1 835713 D 243159 CDS YP_002425397.1 218667025 7135063 835910..837373 1 NC_011761.1 identified by match to protein family HMM PF07690; EmrB/QacA family drug resistance transporter 837373 7135063 AFE_0922 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002425397.1 835910 D 243159 CDS YP_002425398.1 218665704 7134890 complement(837374..838039) 1 NC_011761.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 838039 7134890 AFE_0923 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425398.1 837374 R 243159 CDS YP_002425399.1 218665343 7137187 complement(838080..840668) 1 NC_011761.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF08335; match to protein family HMM TIGR01693; protein-P-II uridylyltransferase 840668 glnD 7137187 glnD Acidithiobacillus ferrooxidans ATCC 23270 protein-P-II uridylyltransferase YP_002425399.1 838080 R 243159 CDS YP_002425400.1 218668102 7136124 complement(840671..841480) 1 NC_011761.1 identified by similarity to SP:P07906; match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 841480 map 7136124 map Acidithiobacillus ferrooxidans ATCC 23270 methionine aminopeptidase YP_002425400.1 840671 R 243159 CDS YP_002425401.1 218667156 7136838 complement(841499..842197) 1 NC_011761.1 identified by match to protein family HMM PF03749; match to protein family HMM TIGR00230; sugar fermentation stimulation protein 842197 sfsA 7136838 sfsA Acidithiobacillus ferrooxidans ATCC 23270 sugar fermentation stimulation protein YP_002425401.1 841499 R 243159 CDS YP_002425402.1 218667743 7134704 complement(842208..843098) 1 NC_011761.1 identified by match to protein family HMM PF00749; glutamyl-tRNA synthetase 843098 7134704 AFE_0927 Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA synthetase YP_002425402.1 842208 R 243159 CDS YP_002425403.1 218665973 7134417 843160..844182 1 NC_011761.1 identified by similarity to SP:P77785; match to protein family HMM PF02769; match to protein family HMM TIGR01379; thiamine-monophosphate kinase 844182 thiL 7134417 thiL Acidithiobacillus ferrooxidans ATCC 23270 thiamine-monophosphate kinase YP_002425403.1 843160 D 243159 CDS YP_002425404.1 218668007 7134187 844172..844660 1 NC_011761.1 identified by match to protein family HMM PF04608; phosphatidylglycerophosphatase A 844660 pgpA 7134187 pgpA Acidithiobacillus ferrooxidans ATCC 23270 phosphatidylglycerophosphatase A YP_002425404.1 844172 D 243159 CDS YP_002425405.1 218665547 7134771 844657..845502 1 NC_011761.1 identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; CinA family protein 845502 7134771 AFE_0930 Acidithiobacillus ferrooxidans ATCC 23270 CinA family protein YP_002425405.1 844657 D 243159 CDS YP_002425406.1 218666187 7135919 845555..845683 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 845683 7135919 AFE_0931 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425406.1 845555 D 243159 CDS YP_002425407.1 218665991 7134088 845676..846713 1 NC_011761.1 identified by similarity to SP:P16238; match to protein family HMM PF00154; match to protein family HMM TIGR02012; recA protein 846713 recA 7134088 recA Acidithiobacillus ferrooxidans ATCC 23270 recA protein YP_002425407.1 845676 D 243159 CDS YP_002425408.1 218667085 7134205 846714..847166 1 NC_011761.1 identified by match to protein family HMM PF02631; regulatory protein RecX 847166 recX 7134205 recX Acidithiobacillus ferrooxidans ATCC 23270 regulatory protein RecX YP_002425408.1 846714 D 243159 CDS YP_002425409.1 218667664 7136685 847236..849869 1 NC_011761.1 identified by similarity to SP:P00957; match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanyl-tRNA synthetase 849869 alaS 7136685 alaS Acidithiobacillus ferrooxidans ATCC 23270 alanyl-tRNA synthetase YP_002425409.1 847236 D 243159 CDS YP_002425410.1 218666533 7135447 complement(849893..850471) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 850471 7135447 AFE_0935 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425410.1 849893 R 243159 CDS YP_002425411.1 218665815 7136345 complement(850468..850986) 1 NC_011761.1 hydrogenase maturation protease 850986 hoxW 7136345 hoxW Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase maturation protease YP_002425411.1 850468 R 243159 CDS YP_002425412.1 218666693 7135369 complement(850983..852251) 1 NC_011761.1 identified by similarity to GB:BAC00531.1; match to protein family HMM PF00374; [NiFe] hydrogenase subunit alpha 852251 hoxH 7135369 hoxH Acidithiobacillus ferrooxidans ATCC 23270 [NiFe] hydrogenase subunit alpha YP_002425412.1 850983 R 243159 CDS YP_002425413.1 218665380 7134564 complement(852265..853062) 1 NC_011761.1 identified by similarity to GB:BAC00530.1; match to protein family HMM PF01058; [NiFe] hydrogenase subunit delta 853062 hoxY 7134564 hoxY Acidithiobacillus ferrooxidans ATCC 23270 [NiFe] hydrogenase subunit delta YP_002425413.1 852265 R 243159 CDS YP_002425414.1 218667061 7136162 complement(853067..853897) 1 NC_011761.1 identified by similarity to GB:BAC00529.1; match to protein family HMM PF00175; match to protein family HMM PF00970; [NiFe] hydrogenase subunit gamma 853897 hoxU 7136162 hoxU Acidithiobacillus ferrooxidans ATCC 23270 [NiFe] hydrogenase subunit gamma YP_002425414.1 853067 R 243159 CDS YP_002425415.1 218667348 7136661 complement(853890..854996) 1 NC_011761.1 identified by similarity to GB:BAC00528.1; match to protein family HMM PF00037; [NiFe] hydrogenase subunit beta 854996 hoxF 7136661 hoxF Acidithiobacillus ferrooxidans ATCC 23270 [NiFe] hydrogenase subunit beta YP_002425415.1 853890 R 243159 CDS YP_002425416.1 218666010 7135193 complement(855073..856992) 1 NC_011761.1 identified by similarity to SP:P03810; match to protein family HMM PF01464; murein transglycosylase 856992 7135193 AFE_0941 Acidithiobacillus ferrooxidans ATCC 23270 murein transglycosylase YP_002425416.1 855073 R 243159 CDS YP_002425417.1 218667367 7134226 complement(857210..860551) 1 NC_011761.1 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; match to protein family HMM PF04434; DNA helicase, SNF2/RAD54 family 860551 7134226 AFE_0942 Acidithiobacillus ferrooxidans ATCC 23270 DNA helicase, SNF2/RAD54 family YP_002425417.1 857210 R 243159 CDS YP_002425418.1 218666157 7136889 860731..862182 1 NC_011761.1 identified by similarity to SP:P26405; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphomannomutase 862182 7136889 AFE_0943 Acidithiobacillus ferrooxidans ATCC 23270 phosphomannomutase YP_002425418.1 860731 D 243159 CDS YP_002425419.1 218667387 7134057 862166..862474 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 862474 7134057 AFE_0944 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425419.1 862166 D 243159 CDS YP_002425420.1 218668067 7136909 complement(862487..864079) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 864079 7136909 AFE_0945 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002425420.1 862487 R 243159 CDS YP_002425421.1 218667322 7136802 complement(864196..864369) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 864369 7136802 AFE_0946 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425421.1 864196 R 243159 CDS YP_002425422.1 218665252 7135166 864398..866281 1 NC_011761.1 identified by similarity to SP:P30136; match to protein family HMM PF01964; match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 866281 thiC 7135166 thiC Acidithiobacillus ferrooxidans ATCC 23270 thiamine biosynthesis protein ThiC YP_002425422.1 864398 D 243159 CDS YP_002425423.1 218667715 7135741 complement(866307..866771) 1 NC_011761.1 identified by similarity to GB:AAO57577.1; hypothetical protein 866771 7135741 AFE_0949 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425423.1 866307 R 243159 CDS YP_002425424.1 218667377 7135498 complement(866776..868023) 1 NC_011761.1 identified by match to protein family HMM PF00732; match to protein family HMM PF01266; oxidoreductase, GMC family 868023 7135498 AFE_0950 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, GMC family YP_002425424.1 866776 R 243159 CDS YP_002425425.1 218666703 7136899 complement(868053..869459) 1 NC_011761.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 869459 7136899 AFE_0951 Acidithiobacillus ferrooxidans ATCC 23270 aldehyde dehydrogenase (NAD) family protein YP_002425425.1 868053 R 243159 CDS YP_002425426.1 218667069 7134574 complement(869514..869615) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 869615 7134574 AFE_0952 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425426.1 869514 R 243159 CDS YP_002425427.1 218665758 7136669 complement(869633..869836) 1 NC_011761.1 hypothetical protein 869836 7136669 AFE_0953 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425427.1 869633 R 243159 CDS YP_002425428.1 218666440 7136073 complement(869849..870982) 1 NC_011761.1 identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203; cytochrome d ubiquinol oxidase, subunit II 870982 cydB 7136073 cydB Acidithiobacillus ferrooxidans ATCC 23270 cytochrome d ubiquinol oxidase, subunit II YP_002425428.1 869849 R 243159 CDS YP_002425429.1 218665033 7134386 complement(871042..872670) 1 NC_011761.1 identified by similarity to SP:Q09049; match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 872670 cydA 7134386 cydA Acidithiobacillus ferrooxidans ATCC 23270 cytochrome d ubiquinol oxidase, subunit I YP_002425429.1 871042 R 243159 CDS YP_002425430.1 218666111 7134962 complement(872687..873562) 1 NC_011761.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 873562 7134962 AFE_0956 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002425430.1 872687 R 243159 CDS YP_002425431.1 218667928 7137032 873727..875082 1 NC_011761.1 identified by match to protein family HMM PF00158; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator 875082 7137032 AFE_0957 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator YP_002425431.1 873727 D 243159 CDS YP_002425432.1 218666410 7135235 875141..875722 1 NC_011761.1 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 875722 7135235 AFE_0959 Acidithiobacillus ferrooxidans ATCC 23270 phospholipase/carboxylesterase YP_002425432.1 875141 D 243159 CDS YP_002425433.1 218668103 7134354 complement(875719..877137) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 877137 7134354 AFE_0958 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002425433.1 875719 R 243159 CDS YP_002425434.1 218665141 7136839 877541..879085 1 NC_011761.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D 879085 mdoD 7136839 mdoD Acidithiobacillus ferrooxidans ATCC 23270 glucan biosynthesis protein D YP_002425434.1 877541 D 243159 CDS YP_002425435.1 218665799 7134292 879085..879588 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 879588 7134292 AFE_0961 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425435.1 879085 D 243159 CDS YP_002425436.1 218667642 7136114 879591..881669 1 NC_011761.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 881669 mdoH 7136114 mdoH Acidithiobacillus ferrooxidans ATCC 23270 glucosyltransferase MdoH YP_002425436.1 879591 D 243159 CDS YP_002425437.1 218666203 7135816 complement(881688..882704) 1 NC_011761.1 identified by similarity to GB:CAE34367.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; male sterility protein 882704 7135816 AFE_0963 Acidithiobacillus ferrooxidans ATCC 23270 male sterility protein YP_002425437.1 881688 R 243159 CDS YP_002425438.1 218666741 7136559 882717..883280 1 NC_011761.1 identified by match to protein family HMM PF04241; hypothetical protein 883280 7136559 AFE_0964 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425438.1 882717 D 243159 CDS YP_002425439.1 218666046 7137236 883261..883668 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 883668 7137236 AFE_0965 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425439.1 883261 D 243159 CDS YP_002425440.1 218667198 7136966 complement(883707..885059) 1 NC_011761.1 hypothetical protein 885059 7136966 AFE_0966 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425440.1 883707 R 243159 CDS YP_002425441.1 218665578 7135592 complement(885340..888753) 1 NC_011761.1 identified by similarity to GB:AAQ58159.1; type IV pilin biogenesis protein 888753 7135592 AFE_0967 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilin biogenesis protein YP_002425441.1 885340 R 243159 CDS YP_002425442.1 218666207 7135950 complement(888750..889337) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 889337 7135950 AFE_0968 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425442.1 888750 R 243159 CDS YP_002425443.1 218666881 7136563 complement(889334..890467) 1 NC_011761.1 identified by match to protein family HMM TIGR02532; type IV pilin 890467 7136563 AFE_0969 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilin YP_002425443.1 889334 R 243159 CDS YP_002425444.1 218667487 7134591 complement(890470..890970) 1 NC_011761.1 identified by similarity to GB:AAB48595.1; match to protein family HMM PF07963; match to protein family HMM TIGR02532; type IV pilin 890970 7134591 AFE_0970 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilin YP_002425444.1 890470 R 243159 CDS YP_002425445.1 218668046 7136779 complement(890955..891521) 1 NC_011761.1 identified by match to protein family HMM PF07963; match to protein family HMM TIGR02532; pilin signal sequence domain-containing protein 891521 7136779 AFE_0971 Acidithiobacillus ferrooxidans ATCC 23270 pilin signal sequence domain-containing protein YP_002425445.1 890955 R 243159 CDS YP_002425446.1 218665636 7134811 complement(891511..892770) 1 NC_011761.1 identified by similarity to SP:P45793; match to protein family HMM PF00482; type IV pilus biogenesis protein PilC 892770 pilC 7134811 pilC Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus biogenesis protein PilC YP_002425446.1 891511 R 243159 CDS YP_002425447.1 218666621 7135580 complement(892877..893881) 1 NC_011761.1 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 893881 7135580 AFE_0973 Acidithiobacillus ferrooxidans ATCC 23270 periplasmic protease YP_002425447.1 892877 R 243159 CDS YP_002425448.1 218665506 7135352 893861..893965 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 893965 7135352 AFE_0974 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425448.1 893861 D 243159 CDS YP_002425449.1 218665381 7135877 893989..894231 1 NC_011761.1 identified by similarity to SP:P30748; match to protein family HMM PF02597; molybdopterin converting factor subunit 1 894231 moaD 7135877 moaD Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin converting factor subunit 1 YP_002425449.1 893989 D 243159 CDS YP_002425450.1 218667192 7136163 894234..894728 1 NC_011761.1 identified by similarity to SP:P30749; match to protein family HMM PF02391; molybdopterin converting factor subunit 2 894728 moaE 7136163 moaE Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin converting factor subunit 2 YP_002425450.1 894234 D 243159 CDS YP_002425451.1 218667597 7135585 894735..895220 1 NC_011761.1 identified by match to protein family HMM PF04461; hypothetical protein 895220 7135585 AFE_0977 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425451.1 894735 D 243159 CDS YP_002425452.1 218667097 7135770 895238..895567 1 NC_011761.1 identified by similarity to GB:CAB71242.1; match to protein family HMM PF03259; roadblock/LC7 domain-containing protein 895567 7135770 AFE_0978 Acidithiobacillus ferrooxidans ATCC 23270 roadblock/LC7 domain-containing protein YP_002425452.1 895238 D 243159 CDS YP_002425453.1 218668117 7136697 895573..896691 1 NC_011761.1 identified by match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528; glycine cleavage system T protein 896691 gcvT 7136697 gcvT Acidithiobacillus ferrooxidans ATCC 23270 glycine cleavage system T protein YP_002425453.1 895573 D 243159 CDS YP_002425454.1 218666663 7136854 896688..897071 1 NC_011761.1 identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein 897071 gcvH 7136854 gcvH Acidithiobacillus ferrooxidans ATCC 23270 glycine cleavage system H protein YP_002425454.1 896688 D 243159 CDS YP_002425455.1 218666164 7134534 897077..898420 1 NC_011761.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 2 to form the P protein; glycine dehydrogenase subunit 1 898420 gcvP 7134534 gcvP Acidithiobacillus ferrooxidans ATCC 23270 glycine dehydrogenase subunit 1 YP_002425455.1 897077 D 243159 CDS YP_002425456.1 218666337 7134064 898342..899868 1 NC_011761.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; glycine dehydrogenase subunit 2 899868 7134064 AFE_0982 Acidithiobacillus ferrooxidans ATCC 23270 glycine dehydrogenase subunit 2 YP_002425456.1 898342 D 243159 CDS YP_002425457.1 218666325 7136476 complement(899873..901561) 1 NC_011761.1 identified by similarity to SP:P27299; match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein, MsbA family 901561 7136476 AFE_0983 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein, MsbA family YP_002425457.1 899873 R 243159 CDS YP_002425458.1 218668155 7136464 complement(901558..901881) 1 NC_011761.1 identified by similarity to SP:P08811; match to protein family HMM PF00037; ferredoxin 901881 7136464 AFE_0984 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425458.1 901558 R 243159 CDS YP_002425459.1 218667181 7135974 902168..902770 1 NC_011761.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/Tsa family 902770 7135974 AFE_0985 Acidithiobacillus ferrooxidans ATCC 23270 antioxidant, AhpC/Tsa family YP_002425459.1 902168 D 243159 CDS YP_002425460.1 218665186 7134730 complement(902869..903699) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 903699 7134730 AFE_0986 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425460.1 902869 R 243159 CDS YP_002425461.1 218667411 7135672 903698..904558 1 NC_011761.1 identified by similarity to GB:CAE41414.1; match to protein family HMM PF02811; hypothetical protein 904558 7135672 AFE_0987 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425461.1 903698 D 243159 CDS YP_002425462.1 218666938 7136935 904658..905698 1 NC_011761.1 hypothetical protein 905698 7136935 AFE_0988 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425462.1 904658 D 243159 CDS YP_002425463.1 218666474 7134648 complement(905813..906505) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 906505 7134648 AFE_0989 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425463.1 905813 R 243159 CDS YP_002425464.1 218667684 7136284 906355..906747 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 906747 7136284 AFE_0990 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425464.1 906355 D 243159 CDS YP_002425465.1 218667862 7135467 906740..907507 1 NC_011761.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; tRNA (guanosine-2'-O-)-methyltransferase 907507 7135467 AFE_0991 Acidithiobacillus ferrooxidans ATCC 23270 tRNA (guanosine-2'-O-)-methyltransferase YP_002425465.1 906740 D 243159 CDS YP_002425466.1 218666863 7134940 907532..908305 1 NC_011761.1 identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 908305 7134940 AFE_0992 Acidithiobacillus ferrooxidans ATCC 23270 TatD family hydrolase YP_002425466.1 907532 D 243159 CDS YP_002425467.1 218665996 7137112 908302..909060 1 NC_011761.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 909060 7137112 AFE_0993 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002425467.1 908302 D 243159 CDS YP_002425468.1 218667058 7135842 complement(909231..910280) 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 910280 7135842 AFE_0995 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425468.1 909231 R 243159 CDS YP_002425469.1 218665400 7136658 complement(910130..910489) 1 NC_011761.1 identified by match to protein family HMM TIGR01764; DNA binding protein, excisionase family 910489 7136658 AFE_0996 Acidithiobacillus ferrooxidans ATCC 23270 DNA binding protein, excisionase family YP_002425469.1 910130 R 243159 CDS YP_002425470.1 218665133 7136182 complement(910510..910932) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 910932 7136182 AFE_0997 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425470.1 910510 R 243159 CDS YP_002425471.1 218665577 7134284 complement(911295..912026) 1 NC_011761.1 identified by similarity to SP:Q06553; match to protein family HMM PF00717; match to protein family HMM PF01381; match to protein family HMM PF07022; transcriptional regulator 912026 7134284 AFE_0998 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002425471.1 911295 R 243159 CDS YP_002425472.1 218667368 7135949 912109..912318 1 NC_011761.1 identified by similarity to SP:P76063; Cro family transcriptional regulator 912318 7135949 AFE_0999 Acidithiobacillus ferrooxidans ATCC 23270 Cro family transcriptional regulator YP_002425472.1 912109 D 243159 CDS YP_002425473.1 218666564 7136890 912929..913564 1 NC_011761.1 identified by match to protein family HMM PF02498; BRO family protein 913564 7136890 AFE_1000 Acidithiobacillus ferrooxidans ATCC 23270 BRO family protein YP_002425473.1 912929 D 243159 CDS YP_002425474.1 218665383 7135294 913773..914957 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 914957 7135294 AFE_1001 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425474.1 913773 D 243159 CDS YP_002425475.1 218667108 7136165 914990..915688 1 NC_011761.1 identified by similarity to GB:AAM08041.1; hypothetical protein 915688 7136165 AFE_1002 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425475.1 914990 D 243159 CDS YP_002425476.1 218666049 7136708 915678..915878 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 915878 7136708 AFE_1003 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425476.1 915678 D 243159 CDS YP_002425477.1 218667866 7136969 915875..916090 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 916090 7136969 AFE_1004 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425477.1 915875 D 243159 CDS YP_002425478.1 218667919 7134944 916204..916956 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 916956 7134944 AFE_1005 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425478.1 916204 D 243159 CDS YP_002425479.1 218666060 7135226 916983..917486 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 917486 7135226 AFE_1006 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425479.1 916983 D 243159 CDS YP_002425480.1 218665384 7136980 917483..918112 1 NC_011761.1 identified by match to protein family HMM PF01464; transglycosylase 918112 7136980 AFE_1007 Acidithiobacillus ferrooxidans ATCC 23270 transglycosylase YP_002425480.1 917483 D 243159 CDS YP_002425481.1 218665350 7136166 918078..918452 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 918452 7136166 AFE_1008 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425481.1 918078 D 243159 CDS YP_002425482.1 218667406 7136131 918356..918514 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 918514 7136131 AFE_1009 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425482.1 918356 D 243159 CDS YP_002425483.1 218666723 7136930 918496..918792 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 918792 7136930 AFE_1010 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425483.1 918496 D 243159 CDS YP_002425484.1 218666447 7137218 918779..919054 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 919054 7137218 AFE_1011 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425484.1 918779 D 243159 CDS YP_002425485.1 218667830 7134393 919164..919439 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 919439 7134393 AFE_1012 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425485.1 919164 D 243159 CDS YP_002425486.1 218665571 7134908 919436..921553 1 NC_011761.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I 921553 7134908 AFE_1013 Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase I YP_002425486.1 919436 D 243159 CDS YP_002425487.1 218665469 7135943 921696..922022 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 922022 7135943 AFE_1014 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425487.1 921696 D 243159 CDS YP_002425488.1 218667796 7135082 922023..922373 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 922373 7135082 AFE_1015 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425488.1 922023 D 243159 CDS YP_002425489.1 218667292 7134471 922373..923242 1 NC_011761.1 lipoprotein 923242 7134471 AFE_1016 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425489.1 922373 D 243159 CDS YP_002425490.1 218666377 7135136 923239..923397 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 923397 7135136 AFE_1017 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425490.1 923239 D 243159 CDS YP_002425491.1 218665103 7136517 923384..923932 1 NC_011761.1 identified by similarity to SP:P77202; thiol:disulfide interchange domain-containing protein 923932 7136517 AFE_1018 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange domain-containing protein YP_002425491.1 923384 D 243159 CDS YP_002425492.1 218666100 7134254 complement(924286..924396) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 924396 7134254 AFE_1019 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425492.1 924286 R 243159 CDS YP_002425493.1 218666792 7137021 924381..924656 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 924656 7137021 AFE_1020 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425493.1 924381 D 243159 CDS YP_002425494.1 218668049 7137041 924674..924922 1 NC_011761.1 identified by similarity to GB:AAO35815.1; hypothetical protein 924922 7137041 AFE_1021 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425494.1 924674 D 243159 CDS YP_002425495.1 218665586 7134814 924960..925817 1 NC_011761.1 identified by match to protein family HMM PF01734; patatin-like phospholipase family protein 925817 7134814 AFE_1022 Acidithiobacillus ferrooxidans ATCC 23270 patatin-like phospholipase family protein YP_002425495.1 924960 D 243159 CDS YP_002425496.1 218667415 7135528 926062..927426 1 NC_011761.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 927426 7135528 AFE_1023 Acidithiobacillus ferrooxidans ATCC 23270 HNH endonuclease domain-containing protein YP_002425496.1 926062 D 243159 CDS YP_002425497.1 218667203 7136939 927479..928069 1 NC_011761.1 identified by similarity to GB:AAP58571.1; match to protein family HMM PF02163; membrane-associated zinc metalloprotease 928069 7136939 AFE_1024 Acidithiobacillus ferrooxidans ATCC 23270 membrane-associated zinc metalloprotease YP_002425497.1 927479 D 243159 CDS YP_002425498.1 218667433 7135597 928127..928570 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 928570 7135597 AFE_1025 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425498.1 928127 D 243159 CDS YP_002425499.1 218666538 7136722 complement(928656..928748) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 928748 7136722 AFE_1026 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425499.1 928656 R 243159 CDS YP_002425500.1 218665685 7136350 complement(928715..928864) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 928864 7136350 AFE_1027 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425500.1 928715 R 243159 CDS YP_002425501.1 218667014 7137168 928854..929747 1 NC_011761.1 identified by similarity to GB:CAC11876.1; hypothetical protein 929747 7137168 AFE_1028 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425501.1 928854 D 243159 CDS YP_002425502.1 218666631 7134878 929744..930427 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 930427 7134878 AFE_1029 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425502.1 929744 D 243159 CDS YP_002425503.1 218665921 7134502 complement(930584..930796) 1 NC_011761.1 hypothetical protein 930796 7134502 AFE_1030 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425503.1 930584 R 243159 CDS YP_002425504.1 218666503 7134131 complement(930796..931074) 1 NC_011761.1 hypothetical protein 931074 7134131 AFE_1031 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425504.1 930796 R 243159 CDS YP_002425505.1 218666585 7136315 931090..931689 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 931689 7136315 AFE_1032 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425505.1 931090 D 243159 CDS YP_002425506.1 218667645 7135315 931727..932341 1 NC_011761.1 Adjacent to a gene for transposase; identified by match to protein family HMM PF00239; transposon resolvase 932341 7135315 AFE_1033 Acidithiobacillus ferrooxidans ATCC 23270 transposon resolvase YP_002425506.1 931727 D 243159 CDS YP_002425507.1 218667867 7135819 932338..933843 1 NC_011761.1 Adjacent to a gene for resolvase; identified by match to protein family HMM PF07282; transposon transposase 933843 7135819 AFE_1034 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposase YP_002425507.1 932338 D 243159 CDS YP_002425508.1 218665080 7136443 933855..934244 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 934244 7136443 AFE_1035 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425508.1 933855 D 243159 CDS YP_002425509.1 218667478 7135009 934313..935020 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 935020 7135009 AFE_1036 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425509.1 934313 D 243159 CDS YP_002425510.1 218665630 7136770 complement(935088..937397) 1 NC_011761.1 identified by match to protein family HMM TIGR03117; CRISPR-associated DEAD/DEAH-box helicase Csf4 937397 csf4 7136770 csf4 Acidithiobacillus ferrooxidans ATCC 23270 CRISPR-associated DEAD/DEAH-box helicase Csf4 YP_002425510.1 935088 R 243159 CDS YP_002425511.1 218665138 7135573 937392..938141 1 NC_011761.1 identified by match to protein family HMM TIGR03114; CRISPR-associated protein, Csf1 family 938141 csf1 7135573 csf1 Acidithiobacillus ferrooxidans ATCC 23270 CRISPR-associated protein, Csf1 family YP_002425511.1 937392 D 243159 CDS YP_002425512.1 218666329 7134289 938138..939199 1 NC_011761.1 identified by match to protein family HMM TIGR03115; CRISPR-associated protein, Csf2 family 939199 csf2 7134289 csf2 Acidithiobacillus ferrooxidans ATCC 23270 CRISPR-associated protein, Csf2 family YP_002425512.1 938138 D 243159 CDS YP_002425513.1 218665850 7136468 939196..939888 1 NC_011761.1 identified by match to protein family HMM TIGR03116; CRISPR-associated protein, Csf3 family 939888 csf3 7136468 csf3 Acidithiobacillus ferrooxidans ATCC 23270 CRISPR-associated protein, Csf3 family YP_002425513.1 939196 D 243159 CDS YP_002425514.1 218666534 7135405 939901..940068 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 940068 7135405 AFE_1041 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425514.1 939901 D 243159 CDS YP_002425515.1 218665898 7136346 939999..940628 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 940628 7136346 AFE_1042 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425515.1 939999 D 243159 CDS YP_002425516.1 218668124 7134108 complement(942655..942924) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 942924 7134108 AFE_1044 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425516.1 942655 R 243159 CDS YP_002425517.1 218666393 7136861 942952..943341 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 943341 7136861 AFE_1045 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425517.1 942952 D 243159 CDS YP_002425518.1 218665737 7134337 943345..943788 1 NC_011761.1 hypothetical protein 943788 7134337 AFE_1046 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425518.1 943345 D 243159 CDS YP_002425519.1 218667869 7136052 943788..945923 1 NC_011761.1 identified by match to protein family HMM TIGR01448; recombinase D 945923 7136052 AFE_1047 Acidithiobacillus ferrooxidans ATCC 23270 recombinase D YP_002425519.1 943788 D 243159 CDS YP_002425520.1 218665109 7136528 946028..946726 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 946726 7136528 AFE_1048 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425520.1 946028 D 243159 CDS YP_002425521.1 218666432 7134260 946745..946987 1 NC_011761.1 lipoprotein 946987 7134260 AFE_1049 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425521.1 946745 D 243159 CDS YP_002425522.1 218667170 7134378 complement(947030..947323) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 947323 7134378 AFE_1050 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425522.1 947030 R 243159 CDS YP_002425523.1 218667841 7134719 947295..947564 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 947564 7134719 AFE_1051 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425523.1 947295 D 243159 CDS YP_002425524.1 218665414 7134919 947587..947796 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 947796 7134919 AFE_1052 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425524.1 947587 D 243159 CDS YP_002425525.1 218665835 7136196 947846..949570 1 NC_011761.1 identified by similarity to GB:AAF69908.1; match to protein family HMM PF01507; hypothetical protein 949570 7136196 AFE_1053 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425525.1 947846 D 243159 CDS YP_002425526.1 218666752 7135389 949567..950457 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 950457 7135389 AFE_1054 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425526.1 949567 D 243159 CDS YP_002425527.1 218665626 7137247 950462..951001 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 951001 7137247 AFE_1055 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425527.1 950462 D 243159 CDS YP_002425528.1 218666539 7135569 951321..951545 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 951545 7135569 AFE_1056 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425528.1 951321 D 243159 CDS YP_002425529.1 218665663 7136351 951571..953220 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; TPR domain/sulfotransferase domain-containing protein 953220 7136351 AFE_1057 Acidithiobacillus ferrooxidans ATCC 23270 TPR domain/sulfotransferase domain-containing protein YP_002425529.1 951571 D 243159 CDS YP_002425530.1 218668169 7137146 complement(953382..954608) 1 NC_011761.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; ISAfe8, transposase 954608 7137146 AFE_1058 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe8, transposase YP_002425530.1 953382 R 243159 CDS YP_002425531.1 218667446 7135988 954716..955378 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 955378 7135988 AFE_1059 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425531.1 954716 D 243159 CDS YP_002425532.1 218665539 7136736 955400..955894 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 955894 7136736 AFE_1060 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425532.1 955400 D 243159 CDS YP_002425533.1 218667579 7135911 955905..956570 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 956570 7135911 AFE_1062 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425533.1 955905 D 243159 CDS YP_002425534.1 218665205 7135750 complement(956536..956898) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 956898 7135750 AFE_1061 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425534.1 956536 R 243159 CDS YP_002425535.1 218666211 7135693 956877..957275 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 957275 7135693 AFE_1063 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425535.1 956877 D 243159 CDS YP_002425536.1 218667622 7136567 complement(957470..958138) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 958138 7136567 AFE_1064 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425536.1 957470 R 243159 CDS YP_002425537.1 218665052 7135796 958215..958805 1 NC_011761.1 identified by similarity to GB:BAC81997.1; match to protein family HMM PF01464; conjugal transfer protein 958805 7135796 AFE_1065 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein YP_002425537.1 958215 D 243159 CDS YP_002425538.1 218667355 7134981 958886..959899 1 NC_011761.1 pilus assembly protein TraF 959899 7134981 AFE_1066 Acidithiobacillus ferrooxidans ATCC 23270 pilus assembly protein TraF YP_002425538.1 958886 D 243159 CDS YP_002425539.1 218665518 7136877 959911..961590 1 NC_011761.1 identified by similarity to SP:P15069; pilus assembly protein TraH 961590 7136877 AFE_1067 Acidithiobacillus ferrooxidans ATCC 23270 pilus assembly protein TraH YP_002425539.1 959911 D 243159 CDS YP_002425540.1 218667671 7135889 961593..965249 1 NC_011761.1 identified by similarity to GB:AAK61533.1; pilus assembly protein TraG 965249 7135889 AFE_1068 Acidithiobacillus ferrooxidans ATCC 23270 pilus assembly protein TraG YP_002425540.1 961593 D 243159 CDS YP_002425541.1 218667985 7135454 965317..965826 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 965826 7135454 AFE_1069 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425541.1 965317 D 243159 CDS YP_002425542.1 218667321 7134749 complement(966017..966292) 1 NC_011761.1 identified by match to protein family HMM PF00216; HU family DNA-binding protein 966292 7134749 AFE_1070 Acidithiobacillus ferrooxidans ATCC 23270 HU family DNA-binding protein YP_002425542.1 966017 R 243159 CDS YP_002425543.1 218666238 7135165 966291..966830 1 NC_011761.1 identified by similarity to GB:CAD84733.1; hypothetical protein 966830 7135165 AFE_1071 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425543.1 966291 D 243159 CDS YP_002425544.1 218665559 7136595 966834..967562 1 NC_011761.1 identified by match to protein family HMM PF08808; hypothetical protein 967562 7136595 AFE_1072 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425544.1 966834 D 243159 CDS YP_002425545.1 218665269 7135931 967633..968574 1 NC_011761.1 identified by match to protein family HMM PF02498; BRO family protein 968574 7135931 AFE_1073 Acidithiobacillus ferrooxidans ATCC 23270 BRO family protein YP_002425545.1 967633 D 243159 CDS YP_002425546.1 218667432 7136210 968571..968825 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 968825 7136210 AFE_1074 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425546.1 968571 D 243159 CDS YP_002425547.1 218666471 7136721 968890..970008 1 NC_011761.1 hypothetical protein 970008 7136721 AFE_1075 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425547.1 968890 D 243159 CDS YP_002425548.1 218667104 7136281 970041..970391 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 970391 7136281 AFE_1076 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425548.1 970041 D 243159 CDS YP_002425549.1 218666341 7136704 970391..971269 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 971269 7136704 AFE_1077 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425549.1 970391 D 243159 CDS YP_002425550.1 218666959 7136480 971257..971535 1 NC_011761.1 identified by similarity to GB:AAM08076.1; match to protein family HMM TIGR02762; type IV conjugative transfer system protein TraL 971535 traL 7136480 traL Acidithiobacillus ferrooxidans ATCC 23270 type IV conjugative transfer system protein TraL YP_002425550.1 971257 D 243159 CDS YP_002425551.1 218667442 7134822 971532..972146 1 NC_011761.1 identified by similarity to GB:AAL27019.1; match to protein family HMM TIGR02761; type IV conjugative transfer system protein TraE 972146 traE 7134822 traE Acidithiobacillus ferrooxidans ATCC 23270 type IV conjugative transfer system protein TraE YP_002425551.1 971532 D 243159 CDS YP_002425552.1 218665218 7136732 972143..973315 1 NC_011761.1 identified by similarity to GB:AAM90706.1; TraK lipoprotein 973315 traK 7136732 traK Acidithiobacillus ferrooxidans ATCC 23270 TraK lipoprotein YP_002425552.1 972143 D 243159 CDS YP_002425553.1 218666296 7135706 973312..974943 1 NC_011761.1 identified by similarity to GB:AAD54048.1; conjugal transfer protein 974943 7135706 AFE_1081 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein YP_002425553.1 973312 D 243159 CDS YP_002425554.1 218665949 7137304 974940..975437 1 NC_011761.1 identified by similarity to SP:P41069; match to protein family HMM TIGR02747; conjugal transfer protein TraV 975437 traV 7137304 traV Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraV YP_002425554.1 974940 D 243159 CDS YP_002425555.1 218666839 7134159 975473..975880 1 NC_011761.1 identified by similarity to GB:AAM08062.1; conjugal transfer protein TraA 975880 traA 7134159 traA Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraA YP_002425555.1 975473 D 243159 CDS YP_002425556.1 218665152 7137088 complement(975850..976389) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 976389 7137088 AFE_1083 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425556.1 975850 R 243159 CDS YP_002425557.1 218667224 7134304 976486..977310 1 NC_011761.1 identified by similarity to SP:P77202; thiol:disulfide interchange domain-containing protein 977310 7134304 AFE_1085 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange domain-containing protein YP_002425557.1 976486 D 243159 CDS YP_002425558.1 218668145 7135618 977363..978286 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 978286 7135618 AFE_1086 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425558.1 977363 D 243159 CDS YP_002425559.1 218666427 7135964 978463..979653 1 NC_011761.1 identified by match to protein family HMM PF00437; type II/IV secretion system protein 979653 7135964 AFE_1087 Acidithiobacillus ferrooxidans ATCC 23270 type II/IV secretion system protein YP_002425559.1 978463 D 243159 CDS YP_002425560.1 218665926 7134373 979643..980407 1 NC_011761.1 identified by similarity to SP:Q44504; thiol:disulfide interchange protein, DsbA family 980407 7134373 AFE_1088 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange protein, DsbA family YP_002425560.1 979643 D 243159 CDS YP_002425561.1 218667818 7134136 980404..983004 1 NC_011761.1 identified by similarity to SP:P18004; match to protein family HMM TIGR02746; type-IV secretion system protein TraC 983004 traC 7134136 traC Acidithiobacillus ferrooxidans ATCC 23270 type-IV secretion system protein TraC YP_002425561.1 980404 D 243159 CDS YP_002425562.1 218667178 7134493 983004..983498 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 983498 7134493 AFE_1090 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425562.1 983004 D 243159 CDS YP_002425563.1 218666266 7134727 983458..984012 1 NC_011761.1 identified by similarity to SP:P26844; similarity to GB:AAL59670.1; conjugation signal peptidase TraF 984012 7134727 AFE_1091 Acidithiobacillus ferrooxidans ATCC 23270 conjugation signal peptidase TraF YP_002425563.1 983458 D 243159 CDS YP_002425564.1 218665602 7136623 984124..985092 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 985092 7136623 AFE_1093 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425564.1 984124 D 243159 CDS YP_002425565.1 218665164 7135545 complement(984901..985194) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 985194 7135545 AFE_1092 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425565.1 984901 R 243159 CDS YP_002425566.1 218665616 7134316 985277..985909 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 985909 7134316 AFE_1094 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425566.1 985277 D 243159 CDS YP_002425567.1 218666572 7135559 985906..987174 1 NC_011761.1 identified by similarity to SP:P18472; pilus assembly protein TraW 987174 7135559 AFE_1095 Acidithiobacillus ferrooxidans ATCC 23270 pilus assembly protein TraW YP_002425567.1 985906 D 243159 CDS YP_002425568.1 218665728 7135302 987452..988702 1 NC_011761.1 identified by similarity to SP:P18471; conjugal transfer protein TraU 988702 7135302 AFE_1096 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraU YP_002425568.1 987452 D 243159 CDS YP_002425569.1 218667164 7136043 988768..991827 1 NC_011761.1 identified by similarity to SP:P24082; conjugal transfer protein TraN 991827 7136043 AFE_1097 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraN YP_002425569.1 988768 D 243159 CDS YP_002425570.1 218667753 7134712 991885..992124 1 NC_011761.1 identified by similarity to SP:P18534; match to protein family HMM PF04014; pemI family protein 992124 7134712 AFE_1098 Acidithiobacillus ferrooxidans ATCC 23270 pemI family protein YP_002425570.1 991885 D 243159 CDS YP_002425571.1 218666923 7134427 992124..992465 1 NC_011761.1 identified by similarity to SP:P33645; match to protein family HMM PF02452; ChpA protein 992465 chpA 7134427 chpA Acidithiobacillus ferrooxidans ATCC 23270 ChpA protein YP_002425571.1 992124 D 243159 CDS YP_002425572.1 218665159 7134633 992568..993596 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 993596 7134633 AFE_1100 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425572.1 992568 D 243159 CDS YP_002425573.1 218667663 7134311 993708..993800 1 NC_011761.1 identified by similarity to PIR:S77285; hypothetical protein 993800 7134311 AFE_1101 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425573.1 993708 D 243159 CDS YP_002425574.1 218667502 7135446 993850..994122 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 994122 7135446 AFE_1102 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425574.1 993850 D 243159 CDS YP_002425575.1 218666619 7136367 994216..995241 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 995241 7136367 AFE_1103 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425575.1 994216 D 243159 CDS YP_002425576.1 218665226 7135350 995241..996518 1 NC_011761.1 identified by similarity to SP:P08407; hypothetical protein 996518 7135350 AFE_1104 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425576.1 995241 D 243159 CDS YP_002425577.1 218668090 7135714 996622..997212 1 NC_011761.1 Adjacent to a gene for transposase; identified by match to protein family HMM PF00239; transposon resolvase 997212 7135714 AFE_1105 Acidithiobacillus ferrooxidans ATCC 23270 transposon resolvase YP_002425577.1 996622 D 243159 CDS YP_002425578.1 218665128 7136826 997209..998858 1 NC_011761.1 Adjacent to a gene for resolvase; identified by match to protein family HMM TIGR01766; transposon transposase 998858 7136826 AFE_1106 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposase YP_002425578.1 997209 D 243159 CDS YP_002425579.1 218665851 7134279 999219..999761 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 999761 7134279 AFE_1107 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425579.1 999219 D 243159 CDS YP_002425580.1 218666920 7135406 999791..1000096 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1000096 7135406 AFE_1108 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425580.1 999791 D 243159 CDS YP_002425581.1 218666240 7134630 1000305..1000982 1 NC_011761.1 identified by similarity to GB:BAC41664.1; match to protein family HMM PF08378; hypothetical protein 1000982 7134630 AFE_1109 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425581.1 1000305 D 243159 CDS YP_002425582.1 218665530 7136597 complement(1001068..1002294) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 1002294 7136597 AFE_1110 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002425582.1 1001068 R 243159 CDS YP_002425583.1 218666227 7135901 1002336..1002755 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1002755 7135901 AFE_1111 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425583.1 1002336 D 243159 CDS YP_002425584.1 218665279 7136584 1002755..1003066 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1003066 7136584 AFE_1112 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425584.1 1002755 D 243159 CDS YP_002425585.1 218667223 7136220 1003063..1003296 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1003296 7136220 AFE_1113 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425585.1 1003063 D 243159 CDS YP_002425586.1 218667911 7135617 1003537..1004358 1 NC_011761.1 identified by similarity to SP:P23894; match to protein family HMM PF01435; heat shock protein HtpX 1004358 htpX-1 7135617 htpX-1 Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein HtpX YP_002425586.1 1003537 D 243159 CDS YP_002425587.1 218665878 7135218 1004470..1005354 1 NC_011761.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1005354 7135218 AFE_1115 Acidithiobacillus ferrooxidans ATCC 23270 Ser/Thr protein phosphatase family protein YP_002425587.1 1004470 D 243159 CDS YP_002425588.1 218665532 7135433 1005351..1005590 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1005590 7135433 AFE_1116 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425588.1 1005351 D 243159 CDS YP_002425589.1 218666372 7135903 1005805..1006014 1 NC_011761.1 identified by similarity to GB:CAB97518.1; hypothetical protein 1006014 7135903 AFE_1117 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425589.1 1005805 D 243159 CDS YP_002425590.1 218667105 7136512 1006007..1006258 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1006258 7136512 AFE_1118 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425590.1 1006007 D 243159 CDS YP_002425591.1 218666009 7136705 1006239..1006487 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1006487 7136705 AFE_1119 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425591.1 1006239 D 243159 CDS YP_002425592.1 218665353 7134225 1006534..1007487 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1007487 7134225 AFE_1120 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425592.1 1006534 D 243159 CDS YP_002425593.1 218667983 7136134 1007484..1008092 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1008092 7136134 AFE_1121 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425593.1 1007484 D 243159 CDS YP_002425594.1 218667283 7134747 1008142..1008399 1 NC_011761.1 identified by similarity to GB:BAB48203.1; hypothetical protein 1008399 7134747 AFE_1122 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425594.1 1008142 D 243159 CDS YP_002425595.1 218666758 7135127 complement(1008704..1009240) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1009240 7135127 AFE_1123 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425595.1 1008704 R 243159 CDS YP_002425596.1 218666857 7137253 1009216..1009458 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1009458 7137253 AFE_1124 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425596.1 1009216 D 243159 CDS YP_002425597.1 218667742 7137106 1009464..1009790 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1009790 7137106 AFE_1125 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425597.1 1009464 D 243159 CDS YP_002425598.1 218666235 7134416 1009811..1010182 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1010182 7134416 AFE_1126 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425598.1 1009811 D 243159 CDS YP_002425599.1 218667324 7136592 1010179..1010730 1 NC_011761.1 identified by similarity to PIR:A83628; match to protein family HMM PF05014; nucleoside 2-deoxyribosyltransferase family protein 1010730 7136592 AFE_1127 Acidithiobacillus ferrooxidans ATCC 23270 nucleoside 2-deoxyribosyltransferase family protein YP_002425599.1 1010179 D 243159 CDS YP_002425600.1 218665287 7135168 1010761..1011288 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1011288 7135168 AFE_1128 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425600.1 1010761 D 243159 CDS YP_002425601.1 218666903 7136228 1011311..1011439 1 NC_011761.1 lipoprotein 1011439 7136228 AFE_1129 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425601.1 1011311 D 243159 CDS YP_002425602.1 218666142 7134613 1011478..1011603 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1011603 7134613 AFE_1130 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425602.1 1011478 D 243159 CDS YP_002425603.1 218665922 7134042 1012107..1012523 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1012523 7134042 AFE_1131 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425603.1 1012107 D 243159 CDS YP_002425604.1 218667679 7134132 1012629..1013108 1 NC_011761.1 identified by similarity to GB:AAN68171.1; hypothetical protein 1013108 7134132 AFE_1133 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425604.1 1012629 D 243159 CDS YP_002425605.1 218666370 7135462 complement(1013038..1013496) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1013496 7135462 AFE_1132 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425605.1 1013038 R 243159 CDS YP_002425606.1 218666051 7136510 complement(1013972..1014079) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1014079 7136510 AFE_1134 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425606.1 1013972 R 243159 CDS YP_002425607.1 218667150 7136971 1014070..1014771 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1014771 7136971 AFE_1135 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425607.1 1014070 D 243159 CDS YP_002425608.1 218665298 7134697 1014753..1015283 1 NC_011761.1 identified by similarity to PIR:AH3439; match to protein family HMM PF09335; DedA family membrane protein 1015283 7134697 AFE_1136 Acidithiobacillus ferrooxidans ATCC 23270 DedA family membrane protein YP_002425608.1 1014753 D 243159 CDS YP_002425609.1 218666396 7136239 1015352..1017589 1 NC_011761.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase, UvrD/REP family 1017589 7136239 AFE_1137 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase, UvrD/REP family YP_002425609.1 1015352 D 243159 CDS YP_002425610.1 218667455 7134340 1017579..1017854 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1017854 7134340 AFE_1138 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425610.1 1017579 D 243159 CDS YP_002425611.1 218665334 7136746 1017855..1018163 1 NC_011761.1 identified by similarity to GB:BAC09421.1; hypothetical protein 1018163 7136746 AFE_1140 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425611.1 1017855 D 243159 CDS YP_002425612.1 218667106 7136276 complement(1018070..1018246) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1018246 7136276 AFE_1139 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425612.1 1018070 R 243159 CDS YP_002425613.1 218665034 7136706 1018220..1019098 1 NC_011761.1 identified by similarity to PIR:H90361; hypothetical protein 1019098 7136706 AFE_1141 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425613.1 1018220 D 243159 CDS YP_002425614.1 218666786 7134963 1019378..1020604 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 1020604 7134963 AFE_1142 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002425614.1 1019378 D 243159 CDS YP_002425615.1 218667909 7137283 complement(1020609..1021214) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1021214 7137283 AFE_1143 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425615.1 1020609 R 243159 CDS YP_002425616.1 218666987 7135216 1021715..1021924 1 NC_011761.1 identified by similarity to SP:Q8XYY7; dihydroorotate dehydrogenase domain-containing protein 1021924 7135216 AFE_1144 Acidithiobacillus ferrooxidans ATCC 23270 dihydroorotate dehydrogenase domain-containing protein YP_002425616.1 1021715 D 243159 CDS YP_002425617.1 218666422 7134850 complement(1022137..1023042) 1 NC_011761.1 identified by similarity to SP:P46352; similarity to SP:Q8YJP2; match to protein family HMM PF00589; tyrosine recombinase, phage integrase family 1023042 7134850 AFE_1145 Acidithiobacillus ferrooxidans ATCC 23270 tyrosine recombinase, phage integrase family YP_002425617.1 1022137 R 243159 CDS YP_002425618.1 218666697 7134368 1023249..1023611 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1023611 7134368 AFE_1146 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425618.1 1023249 D 243159 CDS YP_002425619.1 218665505 7134568 1023623..1023889 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1023889 7134568 AFE_1147 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425619.1 1023623 D 243159 CDS YP_002425620.1 218666561 7135876 1023901..1024455 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1024455 7135876 AFE_1148 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425620.1 1023901 D 243159 CDS YP_002425621.1 218666505 7135291 complement(1024642..1025079) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1025079 7135291 AFE_1149 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425621.1 1024642 R 243159 CDS YP_002425622.1 218667650 7136317 complement(1025220..1025762) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1025762 7136317 AFE_1150 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425622.1 1025220 R 243159 CDS YP_002425623.1 218665260 7135824 complement(1025772..1025867) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1025867 7135824 AFE_1151 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425623.1 1025772 R 243159 CDS YP_002425624.1 218665243 7136201 complement(1025907..1026452) 1 NC_011761.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 1026452 7136201 AFE_1152 Acidithiobacillus ferrooxidans ATCC 23270 HNH endonuclease domain-containing protein YP_002425624.1 1025907 R 243159 CDS YP_002425625.1 218666132 7135732 complement(1026498..1026725) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1026725 7135732 AFE_1153 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425625.1 1026498 R 243159 CDS YP_002425626.1 218667939 7134032 complement(1026725..1027123) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1027123 7134032 AFE_1154 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425626.1 1026725 R 243159 CDS YP_002425627.1 218667879 7136023 complement(1029150..1029401) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1029401 7136023 AFE_1169 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425627.1 1029150 R 243159 CDS YP_002425628.1 218666409 7136538 1029474..1029983 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1029983 7136538 AFE_1170 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425628.1 1029474 D 243159 CDS YP_002425629.1 218666608 7135865 complement(1030242..1030520) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1030520 7135865 AFE_1174 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425629.1 1030242 R 243159 CDS YP_002425630.1 218665200 7135840 complement(1031115..1031396) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1031396 7135840 AFE_1176 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425630.1 1031115 R 243159 CDS YP_002425631.1 218665846 7135838 complement(1031930..1032673) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1032673 7135838 AFE_1178 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425631.1 1031930 R 243159 CDS YP_002425632.1 218665496 7135998 complement(1036224..1036385) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1036385 7135998 AFE_1195 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425632.1 1036224 R 243159 CDS YP_002425633.1 218666537 7135109 1036357..1036500 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1036500 7135109 AFE_1196 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425633.1 1036357 D 243159 CDS YP_002425634.1 218666892 7136349 complement(1036579..1037418) 1 NC_011761.1 identified by similarity to GB:BAC74789.1; hypothetical protein 1037418 7136349 AFE_1197 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425634.1 1036579 R 243159 CDS YP_002425635.1 218667405 7134602 complement(1037647..1037916) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1037916 7134602 AFE_1198 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425635.1 1037647 R 243159 CDS YP_002425636.1 218667057 7136929 complement(1037913..1038350) 1 NC_011761.1 identified by match to protein family HMM PF00075; ribonuclease HI 1038350 rnhA-1 7136929 rnhA-1 Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease HI YP_002425636.1 1037913 R 243159 CDS YP_002425637.1 218665418 7136657 complement(1038371..1038994) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1038994 7136657 AFE_1200 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425637.1 1038371 R 243159 CDS YP_002425638.1 218666037 7135027 1039166..1039996 1 NC_011761.1 identified by similarity to PIR:T45494; match to protein family HMM PF08721; match to protein family HMM PF08722; Tn5468, transposase A 1039996 tnsA-1 7135027 tnsA-1 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposase A YP_002425638.1 1039166 D 243159 CDS YP_002425639.1 218668133 7136957 1039993..1042161 1 NC_011761.1 identified by similarity to PIR:T45495; Tn5468, transposase B 1042161 tnsB-1 7136957 tnsB-1 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposase B YP_002425639.1 1039993 D 243159 CDS YP_002425640.1 218666365 7136870 1042142..1043800 1 NC_011761.1 identified by similarity to PIR:T45496; Tn5468, transposition protein C 1043800 tnsC-1 7136870 tnsC-1 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposition protein C YP_002425640.1 1042142 D 243159 CDS YP_002425641.1 218667038 7136505 1043812..1045641 1 NC_011761.1 identified by similarity to PIR:T45497; Tn5468, transposition protein D 1045641 tnsD-1 7136505 tnsD-1 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposition protein D YP_002425641.1 1043812 D 243159 CDS YP_002425642.1 218665068 7136638 1045661..1047328 1 NC_011761.1 identified by similarity to PIR:T45498; Tn5468, orf5 1047328 7136638 AFE_1205 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, orf5 YP_002425642.1 1045661 D 243159 CDS YP_002425643.1 218665743 7134997 complement(1047410..1050838) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1050838 7134997 AFE_1206 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425643.1 1047410 R 243159 CDS YP_002425644.1 218666385 7136058 complement(1050913..1051005) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1051005 7136058 AFE_1207 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425644.1 1050913 R 243159 CDS YP_002425645.1 218667765 7136525 1051042..1054017 1 NC_011761.1 identified by similarity to GB:CAC14218.1; match to protein family HMM TIGR01414; outer membrane autotransporter TapA 1054017 7136525 AFE_1208 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane autotransporter TapA YP_002425645.1 1051042 D 243159 CDS YP_002425646.1 218667229 7134440 1054149..1064603 1 NC_011761.1 identified by match to protein family HMM TIGR01414; outer membrane autotransporter 1064603 7134440 AFE_1209 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane autotransporter YP_002425646.1 1054149 D 243159 CDS YP_002425647.1 218665910 7135623 1064536..1065282 1 NC_011761.1 identified by match to protein family HMM PF03171; 2OG-Fe(II) oxygenase 1065282 7135623 AFE_1210 Acidithiobacillus ferrooxidans ATCC 23270 2OG-Fe(II) oxygenase YP_002425647.1 1064536 D 243159 CDS YP_002425648.1 218665769 7134120 1065275..1067362 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07721; TPR domain/sulfotransferase domain-containing protein 1067362 7134120 AFE_1211 Acidithiobacillus ferrooxidans ATCC 23270 TPR domain/sulfotransferase domain-containing protein YP_002425648.1 1065275 D 243159 CDS YP_002425649.1 218667701 7136084 1067359..1068516 1 NC_011761.1 identified by similarity to GB:CAD16952.1; hypothetical protein 1068516 7136084 AFE_1212 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425649.1 1067359 D 243159 CDS YP_002425650.1 218666011 7135484 complement(1069192..1069338) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1069338 7135484 AFE_1213 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425650.1 1069192 R 243159 CDS YP_002425651.1 218665620 7134227 complement(1069934..1070398) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1070398 7134227 AFE_1214 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425651.1 1069934 R 243159 CDS YP_002425652.1 218665173 7135563 complement(1070500..1071726) 1 NC_011761.1 identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; ISAfe8, transposase 1071726 7135563 AFE_1215 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe8, transposase YP_002425652.1 1070500 R 243159 CDS YP_002425653.1 218666898 7134325 complement(1071811..1072161) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1072161 7134325 AFE_1216 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425653.1 1071811 R 243159 CDS YP_002425654.1 218665955 7134608 complement(1072193..1072804) 1 NC_011761.1 identified by match to protein family HMM PF03167; uracil-DNA glycosylase, family 4 1072804 7134608 AFE_1217 Acidithiobacillus ferrooxidans ATCC 23270 uracil-DNA glycosylase, family 4 YP_002425654.1 1072193 R 243159 CDS YP_002425655.1 218667668 7134166 complement(1072804..1073520) 1 NC_011761.1 identified by similarity to PIR:A97990; hypothetical protein 1073520 7134166 AFE_1218 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425655.1 1072804 R 243159 CDS YP_002425656.1 218665069 7135591 complement(1074584..1075369) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1075369 7135591 AFE_1220 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425656.1 1074584 R 243159 CDS YP_002425657.1 218666381 7134998 complement(1075392..1076006) 1 NC_011761.1 identified by similarity to SP:P11409; modification methylase 1076006 7134998 AFE_1221 Acidithiobacillus ferrooxidans ATCC 23270 modification methylase YP_002425657.1 1075392 R 243159 CDS YP_002425658.1 218665781 7136521 1076212..1076925 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1076925 7136521 AFE_1222 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425658.1 1076212 D 243159 CDS YP_002425659.1 218667232 7136096 1076934..1077062 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1077062 7136096 AFE_1224 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425659.1 1076934 D 243159 CDS YP_002425660.1 218667896 7135626 complement(1076987..1077580) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1077580 7135626 AFE_1223 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425660.1 1076987 R 243159 CDS YP_002425661.1 218666918 7135203 complement(1077701..1077793) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1077793 7135203 AFE_1225 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425661.1 1077701 R 243159 CDS YP_002425662.1 218665145 7134628 complement(1077839..1080466) 1 NC_011761.1 identified by match to protein family HMM PF02463; GTP-binding protein 1080466 7134628 AFE_1226 Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein YP_002425662.1 1077839 R 243159 CDS YP_002425663.1 218667988 7134297 complement(1080466..1081581) 1 NC_011761.1 identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1081581 7134297 AFE_1227 Acidithiobacillus ferrooxidans ATCC 23270 Ser/Thr protein phosphatase family protein YP_002425663.1 1080466 R 243159 CDS YP_002425664.1 218666463 7134752 1081774..1082214 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1082214 7134752 AFE_1228 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425664.1 1081774 D 243159 CDS YP_002425665.1 218667908 7134409 complement(1082240..1082926) 1 NC_011761.1 identified by match to protein family HMM PF00563; EAL domain-containing protein 1082926 7134409 AFE_1229 Acidithiobacillus ferrooxidans ATCC 23270 EAL domain-containing protein YP_002425665.1 1082240 R 243159 CDS YP_002425666.1 218667573 7135215 complement(1082930..1084759) 1 NC_011761.1 identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03120; NAD-dependent DNA ligase 1084759 7135215 AFE_1230 Acidithiobacillus ferrooxidans ATCC 23270 NAD-dependent DNA ligase YP_002425666.1 1082930 R 243159 CDS YP_002425667.1 218667303 7136440 complement(1084756..1084983) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1084983 7136440 AFE_1231 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425667.1 1084756 R 243159 CDS YP_002425668.1 218665387 7135147 complement(1085271..1086209) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1086209 7135147 AFE_1232 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425668.1 1085271 R 243159 CDS YP_002425669.1 218666753 7136169 complement(1086194..1086649) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1086649 7136169 AFE_1233 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425669.1 1086194 R 243159 CDS YP_002425670.1 218666459 7137248 complement(1086655..1086978) 1 NC_011761.1 identified by match to protein family HMM PF05433; lipoprotein 1086978 7137248 AFE_1234 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425670.1 1086655 R 243159 CDS YP_002425671.1 218665998 7134405 complement(1087010..1087678) 1 NC_011761.1 lipoprotein 1087678 7134405 AFE_1235 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425671.1 1087010 R 243159 CDS YP_002425672.1 218665994 7134213 complement(1087692..1088339) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1088339 7134213 AFE_1236 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425672.1 1087692 R 243159 CDS YP_002425673.1 218666712 7134208 complement(1088355..1088720) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1088720 7134208 AFE_1237 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425673.1 1088355 R 243159 CDS YP_002425674.1 218667414 7137207 complement(1088997..1089170) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1089170 7137207 AFE_1238 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425674.1 1088997 R 243159 CDS YP_002425675.1 218665773 7136938 complement(1089174..1089374) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1089374 7136938 AFE_1239 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425675.1 1089174 R 243159 CDS YP_002425676.1 218667010 7136088 complement(1089374..1089718) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1089718 7136088 AFE_1240 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425676.1 1089374 R 243159 CDS YP_002425677.1 218666298 7134873 1089791..1090249 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1090249 7134873 AFE_1242 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425677.1 1089791 D 243159 CDS YP_002425678.1 218667767 7137306 complement(1090147..1090422) 1 NC_011761.1 identified by match to protein family HMM PF00216; DNA-binding protein HU family protein 1090422 7137306 AFE_1241 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein HU family protein YP_002425678.1 1090147 R 243159 CDS YP_002425679.1 218667998 7134442 complement(1090415..1090729) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1090729 7134442 AFE_1243 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425679.1 1090415 R 243159 CDS YP_002425680.1 218665211 7134762 complement(1090726..1091016) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1091016 7134762 AFE_1244 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425680.1 1090726 R 243159 CDS YP_002425681.1 218666195 7135699 complement(1091016..1091528) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1091528 7135699 AFE_1245 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425681.1 1091016 R 243159 CDS YP_002425682.1 218667342 7134330 1091625..1091840 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1091840 7134330 AFE_1246 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425682.1 1091625 D 243159 CDS YP_002425683.1 218667613 7135187 1091852..1092022 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1092022 7135187 AFE_1247 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425683.1 1091852 D 243159 CDS YP_002425684.1 218666937 7135787 complement(1092194..1092451) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1092451 7135787 AFE_1248 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425684.1 1092194 R 243159 CDS YP_002425685.1 218667098 7134647 complement(1092444..1093496) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1093496 7134647 AFE_1249 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425685.1 1092444 R 243159 CDS YP_002425686.1 218666773 7136698 1093608..1093799 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1093799 7136698 AFE_1250 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425686.1 1093608 D 243159 CDS YP_002425687.1 218665049 7137269 1093796..1095655 1 NC_011761.1 lipoprotein 1095655 7137269 AFE_1251 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425687.1 1093796 D 243159 CDS YP_002425688.1 218668019 7134978 1095652..1096761 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1096761 7134978 AFE_1253 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425688.1 1095652 D 243159 CDS YP_002425689.1 218667474 7134784 complement(1096686..1097222) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1097222 7134784 AFE_1252 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425689.1 1096686 R 243159 CDS YP_002425690.1 218665319 7136766 1097205..1099712 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1099712 7136766 AFE_1254 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425690.1 1097205 D 243159 CDS YP_002425691.1 218666411 7136260 1099712..1100605 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1100605 7136260 AFE_1255 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425691.1 1099712 D 243159 CDS YP_002425692.1 218665467 7134355 1100598..1101200 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1101200 7134355 AFE_1256 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425692.1 1100598 D 243159 CDS YP_002425693.1 218667410 7135080 complement(1101328..1102272) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1102272 7135080 AFE_1257 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425693.1 1101328 R 243159 CDS YP_002425694.1 218666875 7136934 complement(1102269..1103558) 1 NC_011761.1 DNA topoisomerase domain-containing protein 1103558 7136934 AFE_1258 Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase domain-containing protein YP_002425694.1 1102269 R 243159 CDS YP_002425695.1 218667591 7134585 complement(1103578..1103790) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1103790 7134585 AFE_1259 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425695.1 1103578 R 243159 CDS YP_002425696.1 218666983 7135763 1103755..1104240 1 NC_011761.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 1104240 ssb-3 7135763 ssb-3 Acidithiobacillus ferrooxidans ATCC 23270 single-strand binding protein YP_002425696.1 1103755 D 243159 CDS YP_002425697.1 218667925 7134846 1104272..1104502 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1104502 7134846 AFE_1261 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425697.1 1104272 D 243159 CDS YP_002425698.1 218666999 7135232 complement(1104548..1104748) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1104748 7135232 AFE_1262 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425698.1 1104548 R 243159 CDS YP_002425699.1 218666908 7134862 complement(1104831..1105514) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1105514 7134862 AFE_1263 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425699.1 1104831 R 243159 CDS YP_002425700.1 218666099 7134618 complement(1105489..1109700) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1109700 7134618 AFE_1264 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425700.1 1105489 R 243159 CDS YP_002425701.1 218667467 7137020 complement(1109805..1111031) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 1111031 7137020 AFE_1265 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002425701.1 1109805 R 243159 CDS YP_002425702.1 218667024 7136758 complement(1111173..1113290) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1113290 7136758 AFE_1266 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425702.1 1111173 R 243159 CDS YP_002425703.1 218667306 7134889 complement(1113548..1113655) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1113655 7134889 AFE_1267 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425703.1 1113548 R 243159 CDS YP_002425704.1 218667195 7135150 1113674..1114078 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1114078 7135150 AFE_1269 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425704.1 1113674 D 243159 CDS YP_002425705.1 218666837 7135588 complement(1114017..1114166) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1114166 7135588 AFE_1268 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425705.1 1114017 R 243159 CDS YP_002425706.1 218665885 7137086 1114293..1114928 1 NC_011761.1 ssDNA-binding protein 1114928 7137086 AFE_1270 Acidithiobacillus ferrooxidans ATCC 23270 ssDNA-binding protein YP_002425706.1 1114293 D 243159 CDS YP_002425707.1 218665653 7134012 1115118..1115372 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1115372 7134012 AFE_1271 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425707.1 1115118 D 243159 CDS YP_002425708.1 218667542 7137136 1115383..1115778 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1115778 7137136 AFE_1272 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425708.1 1115383 D 243159 CDS YP_002425709.1 218666554 7136408 1115993..1116475 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1116475 7136408 AFE_1273 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425709.1 1115993 D 243159 CDS YP_002425710.1 218665484 7135284 1116533..1116886 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1116886 7135284 AFE_1274 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425710.1 1116533 D 243159 CDS YP_002425711.1 218666452 7135097 1116883..1117794 1 NC_011761.1 hypothetical protein 1117794 7135097 AFE_1275 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425711.1 1116883 D 243159 CDS YP_002425712.1 218667486 7134398 1117910..1118200 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1118200 7134398 AFE_1276 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425712.1 1117910 D 243159 CDS YP_002425713.1 218666781 7136778 1118335..1118781 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1118781 7136778 AFE_1277 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425713.1 1118335 D 243159 CDS YP_002425714.1 218667667 7137277 1118792..1119235 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1119235 7137277 AFE_1278 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425714.1 1118792 D 243159 CDS YP_002425715.1 218668150 7135450 1119247..1119705 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1119705 7135450 AFE_1279 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425715.1 1119247 D 243159 CDS YP_002425716.1 218666055 7135969 complement(1119904..1120218) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1120218 7135969 AFE_1280 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425716.1 1119904 R 243159 CDS YP_002425717.1 218666906 7136975 1120192..1120425 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1120425 7136975 AFE_1281 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425717.1 1120192 D 243159 CDS YP_002425718.1 218665693 7134616 1120685..1121170 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1121170 7134616 AFE_1282 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425718.1 1120685 D 243159 CDS YP_002425719.1 218666565 7137176 1121293..1122102 1 NC_011761.1 identified by similarity to PIR:F82867; hypothetical protein 1122102 7137176 AFE_1283 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425719.1 1121293 D 243159 CDS YP_002425720.1 218667311 7135295 1122105..1122551 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1122551 7135295 AFE_1284 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425720.1 1122105 D 243159 CDS YP_002425721.1 218667948 7135155 1122692..1123012 1 NC_011761.1 identified by similarity to GB:AAL55518.2; hypothetical protein 1123012 7135155 AFE_1285 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425721.1 1122692 D 243159 CDS YP_002425722.1 218665423 7135255 1123040..1123954 1 NC_011761.1 identified by similarity to GB:AAL59709.1; match to protein family HMM TIGR03033; hypothetical protein 1123954 7135255 AFE_1286 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425722.1 1123040 D 243159 CDS YP_002425723.1 218666521 7135035 1124083..1124322 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1124322 7135035 AFE_1287 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425723.1 1124083 D 243159 CDS YP_002425724.1 218666616 7136333 1124322..1124777 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1124777 7136333 AFE_1288 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425724.1 1124322 D 243159 CDS YP_002425725.1 218665692 7135347 1124808..1125167 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1125167 7135347 AFE_1289 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425725.1 1124808 D 243159 CDS YP_002425726.1 218666917 7137175 1125164..1125601 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1125601 7137175 AFE_1290 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425726.1 1125164 D 243159 CDS YP_002425727.1 218665113 7134627 1125620..1126051 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1126051 7134627 AFE_1291 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425727.1 1125620 D 243159 CDS YP_002425728.1 218665956 7134264 1126191..1128125 1 NC_011761.1 identified by similarity to GB:AAL59705.1; hypothetical protein 1128125 7134264 AFE_1292 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425728.1 1126191 D 243159 CDS YP_002425729.1 218665300 7134167 1128277..1128618 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1128618 7134167 AFE_1293 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425729.1 1128277 D 243159 CDS YP_002425730.1 218666780 7136241 1128593..1128763 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1128763 7136241 AFE_1294 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425730.1 1128593 D 243159 CDS YP_002425731.1 218666191 7137276 1128803..1129441 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02954; DNA-binding response regulator 1129441 7137276 AFE_1295 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002425731.1 1128803 D 243159 CDS YP_002425732.1 218667331 7134092 1129497..1130459 1 NC_011761.1 identified by similarity to SP:Q47083; match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1130459 7134092 AFE_1296 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002425732.1 1129497 D 243159 CDS YP_002425733.1 218665179 7135176 1130614..1131534 1 NC_011761.1 identified by match to protein family HMM PF07728; cobalamin biosynthesis protein, CobS family 1131534 7135176 AFE_1297 Acidithiobacillus ferrooxidans ATCC 23270 cobalamin biosynthesis protein, CobS family YP_002425733.1 1130614 D 243159 CDS YP_002425734.1 218666708 7135665 1131706..1131906 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1131906 7135665 AFE_1298 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425734.1 1131706 D 243159 CDS YP_002425735.1 218667722 7137203 1131919..1132812 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1132812 7137203 AFE_1299 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425735.1 1131919 D 243159 CDS YP_002425736.1 218665292 7135505 1132941..1133351 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1133351 7135505 AFE_1300 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425736.1 1132941 D 243159 CDS YP_002425737.1 218665557 7136233 1133482..1134501 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1134501 7136233 AFE_1301 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425737.1 1133482 D 243159 CDS YP_002425738.1 218665821 7135929 1134627..1134971 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1134971 7135929 AFE_1302 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425738.1 1134627 D 243159 CDS YP_002425739.1 218667008 7135375 complement(1135418..1135639) 1 NC_011761.1 identified by similarity to SP:O59347; hypothetical protein 1135639 7135375 AFE_1303 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425739.1 1135418 R 243159 CDS YP_002425740.1 218666638 7134871 1135661..1136290 1 NC_011761.1 A gene for transposase is adjacent; identified by match to protein family HMM PF00239; match to protein family HMM PF00376; transposon resolvase 1136290 7134871 AFE_1304 Acidithiobacillus ferrooxidans ATCC 23270 transposon resolvase YP_002425740.1 1135661 D 243159 CDS YP_002425741.1 218666172 7134509 1136287..1137681 1 NC_011761.1 A gene for resolvase is adjacent.; transposon transposase 1137681 7134509 AFE_1305 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposase YP_002425741.1 1136287 D 243159 CDS YP_002425742.1 218667503 7134072 1137805..1138149 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1138149 7134072 AFE_1307 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425742.1 1137805 D 243159 CDS YP_002425743.1 218666665 7136368 complement(1138008..1138391) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1138391 7136368 AFE_1306 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425743.1 1138008 R 243159 CDS YP_002425744.1 218665665 7134536 1138370..1139140 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1139140 7134536 AFE_1308 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425744.1 1138370 D 243159 CDS YP_002425745.1 218666403 7137148 complement(1139409..1139561) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1139561 7137148 AFE_1309 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425745.1 1139409 R 243159 CDS YP_002425746.1 218665911 7134347 1139512..1139631 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1139631 7134347 AFE_1310 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425746.1 1139512 D 243159 CDS YP_002425747.1 218667982 7134121 1139674..1140201 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1140201 7134121 AFE_1311 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425747.1 1139674 D 243159 CDS YP_002425748.1 218665321 7134746 complement(1140247..1140414) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1140414 7134746 AFE_1312 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425748.1 1140247 R 243159 CDS YP_002425749.1 218666404 7136262 1140454..1141008 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1141008 7136262 AFE_1313 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425749.1 1140454 D 243159 CDS YP_002425750.1 218667281 7134348 1141127..1141258 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1141258 7134348 AFE_1315 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425750.1 1141127 D 243159 CDS YP_002425751.1 218665168 7135125 complement(1141227..1141397) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1141397 7135125 AFE_1314 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425751.1 1141227 R 243159 CDS YP_002425752.1 218665990 7134320 1141345..1141626 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1141626 7134320 AFE_1316 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425752.1 1141345 D 243159 CDS YP_002425753.1 218666530 7134204 1141790..1141990 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1141990 7134204 AFE_1317 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425753.1 1141790 D 243159 CDS YP_002425754.1 218667381 7136342 1142009..1142212 1 NC_011761.1 identified by similarity to GB:CAE32168.1; hypothetical protein 1142212 7136342 AFE_1318 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425754.1 1142009 D 243159 CDS YP_002425755.1 218665666 7136903 1142209..1142349 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1142349 7136903 AFE_1319 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425755.1 1142209 D 243159 CDS YP_002425756.1 218666617 7137149 complement(1142391..1142939) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1142939 7137149 AFE_1320 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425756.1 1142391 R 243159 CDS YP_002425757.1 218666357 7135348 complement(1143029..1143364) 1 NC_011761.1 identified by similarity to SP:Q8TKM0; match to protein family HMM PF01906; hypothetical protein 1143364 7135348 AFE_1321 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425757.1 1143029 R 243159 CDS YP_002425758.1 218668153 7136496 complement(1143383..1144000) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1144000 7136496 AFE_1322 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425758.1 1143383 R 243159 CDS YP_002425759.1 218665896 7135972 complement(1144043..1144984) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1144984 7135972 AFE_1323 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425759.1 1144043 R 243159 CDS YP_002425760.1 218667186 7134106 complement(1145282..1145497) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1145497 7134106 AFE_1324 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425760.1 1145282 R 243159 CDS YP_002425761.1 218667615 7134581 1145618..1145965 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1145965 7134581 AFE_1325 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425761.1 1145618 D 243159 CDS YP_002425762.1 218667080 7135789 1145997..1146689 1 NC_011761.1 identified by similarity to PIR:H85644; match to protein family HMM PF08346; hypothetical protein 1146689 7135789 AFE_1326 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425762.1 1145997 D 243159 CDS YP_002425763.1 218667744 7136680 1146884..1147639 1 NC_011761.1 identified by similarity to GB:AAP95799.1; hypothetical protein 1147639 7136680 AFE_1327 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425763.1 1146884 D 243159 CDS YP_002425764.1 218667270 7134418 1147883..1149202 1 NC_011761.1 identified by match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 1149202 7134418 AFE_1328 Acidithiobacillus ferrooxidans ATCC 23270 transposase, IS605 OrfB family protein YP_002425764.1 1147883 D 243159 CDS YP_002425765.1 218665598 7135113 1149174..1149338 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1149338 7135113 AFE_1329 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425765.1 1149174 D 243159 CDS YP_002425766.1 218668077 7135541 1149446..1150708 1 NC_011761.1 similar to IST2, transposase; identified by match to protein family HMM PF00872; ISAfe2, transposase 1150708 7135541 AFE_1330 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe2, transposase YP_002425766.1 1149446 D 243159 CDS YP_002425767.1 218666800 7136813 1151144..1151512 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1151512 7136813 AFE_1331 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425767.1 1151144 D 243159 CDS YP_002425768.1 218665776 7137049 complement(1151692..1151904) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1151904 7137049 AFE_1332 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425768.1 1151692 R 243159 CDS YP_002425769.1 218668099 7136091 1151864..1152244 1 NC_011761.1 identified by similarity to GB:BAB60367.1; hypothetical protein 1152244 7136091 AFE_1333 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425769.1 1151864 D 243159 CDS YP_002425770.1 218665120 7136835 complement(1152287..1152388) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1152388 7136835 AFE_1334 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425770.1 1152287 R 243159 CDS YP_002425771.1 218667736 7134271 1152651..1152947 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1152947 7134271 AFE_1335 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425771.1 1152651 D 243159 CDS YP_002425772.1 218665223 7135519 1152992..1153210 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1153210 7135519 AFE_1336 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425772.1 1152992 D 243159 CDS YP_002425773.1 218667612 7135711 1153226..1153321 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1153321 7135711 AFE_1337 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425773.1 1153226 D 243159 CDS YP_002425774.1 218666936 7135786 1153377..1154420 1 NC_011761.1 identified by match to protein family HMM PF01569; PAP2 family protein 1154420 7135786 AFE_1338 Acidithiobacillus ferrooxidans ATCC 23270 PAP2 family protein YP_002425774.1 1153377 D 243159 CDS YP_002425775.1 218668142 7134646 1154434..1155567 1 NC_011761.1 identified by match to protein family HMM PF02563; polysaccharide biosynthesis/export domain-containing protein 1155567 7134646 AFE_1339 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide biosynthesis/export domain-containing protein YP_002425775.1 1154434 D 243159 CDS YP_002425776.1 218666322 7135961 1155636..1158098 1 NC_011761.1 identified by similarity to SP:P38134; match to protein family HMM PF02706; tyrosine-protein kinase 1158098 7135961 AFE_1340 Acidithiobacillus ferrooxidans ATCC 23270 tyrosine-protein kinase YP_002425776.1 1155636 D 243159 CDS YP_002425777.1 218666006 7136461 1158095..1158856 1 NC_011761.1 identified by similarity to SP:P39852; protein-tyrosine phosphatase 1158856 7136461 AFE_1341 Acidithiobacillus ferrooxidans ATCC 23270 protein-tyrosine phosphatase YP_002425777.1 1158095 D 243159 CDS YP_002425778.1 218665669 7134222 1158856..1159854 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 1159854 galE 7134222 galE Acidithiobacillus ferrooxidans ATCC 23270 UDP-glucose 4-epimerase YP_002425778.1 1158856 D 243159 CDS YP_002425779.1 218667798 7137152 1159883..1161205 1 NC_011761.1 identified by similarity to SP:O54068; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 1161205 7137152 AFE_1343 Acidithiobacillus ferrooxidans ATCC 23270 UDP-glucose 6-dehydrogenase YP_002425779.1 1159883 D 243159 CDS YP_002425780.1 218667054 7134473 1161287..1162753 1 NC_011761.1 identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein 1162753 7134473 AFE_1344 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide biosynthesis protein YP_002425780.1 1161287 D 243159 CDS YP_002425781.1 218666333 7136654 1162750..1163445 1 NC_011761.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 1163445 7136654 AFE_1345 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425781.1 1162750 D 243159 CDS YP_002425782.1 218666068 7136472 1163445..1164476 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1164476 7136472 AFE_1346 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002425782.1 1163445 D 243159 CDS YP_002425783.1 218667604 7136988 1164564..1165481 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1165481 7136988 AFE_1347 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425783.1 1164564 D 243159 CDS YP_002425784.1 218666963 7135778 1165585..1166298 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1166298 7135778 AFE_1348 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425784.1 1165585 D 243159 CDS YP_002425785.1 218665627 7134826 1166268..1167431 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1167431 7134826 AFE_1349 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425785.1 1166268 D 243159 CDS YP_002425786.1 218665876 7135570 1167428..1168852 1 NC_011761.1 hypothetical protein 1168852 7135570 AFE_1350 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425786.1 1167428 D 243159 CDS YP_002425787.1 218665035 7135431 1168849..1170021 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1170021 7135431 AFE_1351 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425787.1 1168849 D 243159 CDS YP_002425788.1 218667720 7134964 1170027..1170206 1 NC_011761.1 lipoprotein 1170206 7134964 AFE_1352 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425788.1 1170027 D 243159 CDS YP_002425789.1 218666816 7135503 1170207..1172105 1 NC_011761.1 identified by similarity to SP:P54420; match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase 1172105 asnB 7135503 asnB Acidithiobacillus ferrooxidans ATCC 23270 asparagine synthase YP_002425789.1 1170207 D 243159 CDS YP_002425790.1 218667766 7137065 1172111..1173259 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1173259 7137065 AFE_1354 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425790.1 1172111 D 243159 CDS YP_002425791.1 218666850 7134441 1173252..1174493 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1174493 7134441 AFE_1355 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425791.1 1173252 D 243159 CDS YP_002425792.1 218666025 7135907 1174696..1175847 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 1175847 7135907 AFE_1357 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002425792.1 1174696 D 243159 CDS YP_002425793.1 218665452 7134241 1175844..1176236 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1176236 7134241 AFE_1358 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425793.1 1175844 D 243159 CDS YP_002425794.1 218665482 7135064 1176233..1176637 1 NC_011761.1 identified by match to protein family HMM PF01909; nucleotidyltransferase 1176637 7135064 AFE_1359 Acidithiobacillus ferrooxidans ATCC 23270 nucleotidyltransferase YP_002425794.1 1176233 D 243159 CDS YP_002425795.1 218666323 7135095 1176627..1177067 1 NC_011761.1 identified by similarity to GB:CAE06995.1; match to protein family HMM PF05168; hypothetical protein 1177067 7135095 AFE_1360 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425795.1 1176627 D 243159 CDS YP_002425796.1 218667301 7136462 1177173..1177466 1 NC_011761.1 identified by similarity to SP:P55510; plasmid stability protein 1177466 7136462 AFE_1361 Acidithiobacillus ferrooxidans ATCC 23270 plasmid stability protein YP_002425796.1 1177173 D 243159 CDS YP_002425797.1 218667390 7135145 1177463..1177891 1 NC_011761.1 identified by similarity to SP:P55511; match to protein family HMM PF01850; plasmid stability protein 1177891 7135145 AFE_1362 Acidithiobacillus ferrooxidans ATCC 23270 plasmid stability protein YP_002425797.1 1177463 D 243159 CDS YP_002425798.1 218666081 7136913 1178048..1178452 1 NC_011761.1 identified by match to protein family HMM PF01909; nucleotidyltransferase 1178452 7136913 AFE_1363 Acidithiobacillus ferrooxidans ATCC 23270 nucleotidyltransferase YP_002425798.1 1178048 D 243159 CDS YP_002425799.1 218667815 7137001 1178442..1178882 1 NC_011761.1 identified by similarity to GB:CAE06995.1; match to protein family HMM PF05168; hypothetical protein 1178882 7137001 AFE_1364 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425799.1 1178442 D 243159 CDS YP_002425800.1 218667603 7134490 1179203..1180618 1 NC_011761.1 identified by match to protein family HMM PF01844; HNH endonuclease domain-containing protein 1180618 7134490 AFE_1365 Acidithiobacillus ferrooxidans ATCC 23270 HNH endonuclease domain-containing protein YP_002425800.1 1179203 D 243159 CDS YP_002425801.1 218667140 7135777 1180676..1182118 1 NC_011761.1 identified by similarity to SP:P29956; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1182118 7135777 AFE_1366 Acidithiobacillus ferrooxidans ATCC 23270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002425801.1 1180676 D 243159 CDS YP_002425802.1 218667849 7134687 1182262..1182489 1 NC_011761.1 identified by similarity to PIR:AF2077; match to protein family HMM PF04255; hypothetical protein 1182489 7134687 AFE_1367 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425802.1 1182262 D 243159 CDS YP_002425803.1 218665288 7134927 1182486..1182839 1 NC_011761.1 identified by similarity to PIR:AG2077; hypothetical protein 1182839 7134927 AFE_1368 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425803.1 1182486 D 243159 CDS YP_002425804.1 218666043 7136229 1182889..1183668 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 1183668 7136229 AFE_1369 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002425804.1 1182889 D 243159 CDS YP_002425805.1 218667649 7136963 1183665..1185119 1 NC_011761.1 identified by similarity to SP:P26406; match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025; undecaprenyl-phosphate galactosephosphotransferase 1185119 7136963 AFE_1370 Acidithiobacillus ferrooxidans ATCC 23270 undecaprenyl-phosphate galactosephosphotransferase YP_002425805.1 1183665 D 243159 CDS YP_002425806.1 218666513 7135823 1185141..1189286 1 NC_011761.1 identified by match to protein family HMM PF00176; match to protein family HMM PF00271; helicase, SNF2/RAD54 family 1189286 7135823 AFE_1371 Acidithiobacillus ferrooxidans ATCC 23270 helicase, SNF2/RAD54 family YP_002425806.1 1185141 D 243159 CDS YP_002425807.1 218666504 7136325 complement(1189572..1190738) 1 NC_011761.1 identified by match to protein family HMM PF02661; fic family protein 1190738 7136325 AFE_1372 Acidithiobacillus ferrooxidans ATCC 23270 fic family protein YP_002425807.1 1189572 R 243159 CDS YP_002425808.1 218665766 7136316 complement(1191240..1191998) 1 NC_011761.1 identified by similarity to SP:P55923; match to protein family HMM PF01695; match to protein family HMM PF08483; transposition helper protein 1191998 7136316 AFE_1373 Acidithiobacillus ferrooxidans ATCC 23270 transposition helper protein YP_002425808.1 1191240 R 243159 CDS YP_002425809.1 218667064 7136305 1192897..1193109 1 NC_011761.1 This element disrupts a gene.; transposon, orf1 1193109 7136305 AFE_1375 Acidithiobacillus ferrooxidans ATCC 23270 transposon, orf1 YP_002425809.1 1192897 D 243159 CDS YP_002425810.1 218667940 7136664 1193286..1193738 1 NC_011761.1 This element disrupts a gene.; transposon orf2 1193738 7136664 AFE_1376 Acidithiobacillus ferrooxidans ATCC 23270 transposon orf2 YP_002425810.1 1193286 D 243159 CDS YP_002425811.1 218666114 7135247 1194000..1196084 1 NC_011761.1 This element disrupts a gene; identified by match to protein family HMM PF07508; transposon orf3 1196084 7135247 AFE_1378 Acidithiobacillus ferrooxidans ATCC 23270 transposon orf3 YP_002425811.1 1194000 D 243159 CDS YP_002425812.1 218667582 7134413 complement(1196897..1197061) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1197061 7134413 AFE_1379 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425812.1 1196897 R 243159 CDS YP_002425813.1 218665599 7135753 1196985..1197239 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1197239 7135753 AFE_1381 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425813.1 1196985 D 243159 CDS YP_002425814.1 218665235 7135542 complement(1197205..1197501) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1197501 7135542 AFE_1380 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425814.1 1197205 R 243159 CDS YP_002425815.1 218665848 7135723 complement(1197505..1197720) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1197720 7135723 AFE_1382 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425815.1 1197505 R 243159 CDS YP_002425816.1 218666557 7135403 complement(1197717..1198025) 1 NC_011761.1 identified by similarity to PIR:AF1935; hypothetical protein 1198025 7135403 AFE_1383 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425816.1 1197717 R 243159 CDS YP_002425817.1 218667318 7135287 complement(1198034..1198375) 1 NC_011761.1 identified by similarity to GB:AAP44226.1; match to protein family HMM PF05973; hypothetical protein 1198375 7135287 AFE_1384 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425817.1 1198034 R 243159 CDS YP_002425818.1 218667215 7136842 1200024..1200248 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1200248 7136842 AFE_1386 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425818.1 1200024 D 243159 CDS YP_002425819.1 218667751 7135609 1200631..1201767 1 NC_011761.1 identified by similarity to PIR:AD2162; match to protein family HMM PF08495; hypothetical protein 1201767 7135609 AFE_1387 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425819.1 1200631 D 243159 CDS YP_002425820.1 218666442 7134425 1201870..1203603 1 NC_011761.1 identified by similarity to SP:P29018; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857; cysteine ABC transporter ATP-binding protein/permease 1203603 cydD 7134425 cydD Acidithiobacillus ferrooxidans ATCC 23270 cysteine ABC transporter ATP-binding protein/permease YP_002425820.1 1201870 D 243159 CDS YP_002425821.1 218665592 7134388 1203596..1205353 1 NC_011761.1 identified by similarity to SP:P23886; match to protein family HMM PF00005; match to protein family HMM TIGR02868; ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC 1205353 7134388 AFE_1390 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC YP_002425821.1 1203596 D 243159 CDS YP_002425822.1 218667174 7135535 complement(1205350..1205697) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1205697 7135535 AFE_1389 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425822.1 1205350 R 243159 CDS YP_002425823.1 218667779 7134723 complement(1205701..1206666) 1 NC_011761.1 identified by match to protein family HMM PF01571; match to protein family HMM TIGR03317; folate-binding protein YgfZ 1206666 ygfZ 7134723 ygfZ Acidithiobacillus ferrooxidans ATCC 23270 folate-binding protein YgfZ YP_002425823.1 1205701 R 243159 CDS YP_002425824.1 218667611 7134454 1206650..1207180 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1207180 7134454 AFE_1393 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425824.1 1206650 D 243159 CDS YP_002425825.1 218667854 7135785 complement(1207125..1208714) 1 NC_011761.1 identified by similarity to SP:P10902; match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF07992; match to protein family HMM TIGR00551; L-aspartate oxidase 1208714 nadB 7135785 nadB Acidithiobacillus ferrooxidans ATCC 23270 L-aspartate oxidase YP_002425825.1 1207125 R 243159 CDS YP_002425826.1 218665263 7134932 1208831..1209457 1 NC_011761.1 identified by similarity to SP:P34086; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02939; RNA polymerase sigma-E factor 1209457 rpoE 7134932 rpoE Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigma-E factor YP_002425826.1 1208831 D 243159 CDS YP_002425827.1 218665108 7136204 1209454..1210116 1 NC_011761.1 identified by similarity to GB:AAQ59731.1; hypothetical protein 1210116 7136204 AFE_1395 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425827.1 1209454 D 243159 CDS YP_002425828.1 218668070 7134259 1210286..1211725 1 NC_011761.1 identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease, DO/DeqQ family 1211725 7134259 AFE_1396 Acidithiobacillus ferrooxidans ATCC 23270 serine protease, DO/DeqQ family YP_002425828.1 1210286 D 243159 CDS YP_002425829.1 218667461 7136806 1211831..1213633 1 NC_011761.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1213633 lepA 7136806 lepA Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein LepA YP_002425829.1 1211831 D 243159 CDS YP_002425830.1 218666063 7136752 1213700..1214491 1 NC_011761.1 identified by similarity to SP:P26844; match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 1214491 lepB 7136752 lepB Acidithiobacillus ferrooxidans ATCC 23270 signal peptidase I YP_002425830.1 1213700 D 243159 CDS YP_002425831.1 218667758 7136983 1214574..1215008 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1215008 7136983 AFE_1399 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425831.1 1214574 D 243159 CDS YP_002425832.1 218665431 7134433 1215071..1215751 1 NC_011761.1 identified by similarity to SP:P05797; match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 1215751 rnc 7134433 rnc Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease III YP_002425832.1 1215071 D 243159 CDS YP_002425833.1 218666809 7135043 1215744..1216658 1 NC_011761.1 identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; match to protein family HMM TIGR00650; GTP-binding protein Era 1216658 era 7135043 era Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein Era YP_002425833.1 1215744 D 243159 CDS YP_002425834.1 218665687 7137058 1216648..1217415 1 NC_011761.1 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 1217415 7137058 AFE_1402 Acidithiobacillus ferrooxidans ATCC 23270 DNA repair protein RecO YP_002425834.1 1216648 D 243159 CDS YP_002425835.1 218667027 7137170 1217412..1218137 1 NC_011761.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1218137 pdxJ 7137170 pdxJ Acidithiobacillus ferrooxidans ATCC 23270 pyridoxine 5'-phosphate synthase YP_002425835.1 1217412 D 243159 CDS YP_002425836.1 218665264 7134892 1218134..1218523 1 NC_011761.1 identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-(acyl-carrier-protein) synthase 1218523 acpS 7134892 acpS Acidithiobacillus ferrooxidans ATCC 23270 holo-(acyl-carrier-protein) synthase YP_002425836.1 1218134 D 243159 CDS YP_002425837.1 218667647 7136205 1218527..1219849 1 NC_011761.1 identified by similarity to SP:O54068; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase 1219849 7136205 AFE_1405 Acidithiobacillus ferrooxidans ATCC 23270 UDP-glucose 6-dehydrogenase YP_002425837.1 1218527 D 243159 CDS YP_002425838.1 218666267 7135821 1219851..1220801 1 NC_011761.1 identified by similarity to GB:AAD49846.1; match to protein family HMM PF00294; match to protein family HMM TIGR02198; kinase, pfkB family 1220801 7135821 AFE_1406 Acidithiobacillus ferrooxidans ATCC 23270 kinase, pfkB family YP_002425838.1 1219851 D 243159 CDS YP_002425839.1 218667600 7136624 1220791..1221573 1 NC_011761.1 identified by match to protein family HMM PF01171; PP-loop family protein 1221573 7136624 AFE_1407 Acidithiobacillus ferrooxidans ATCC 23270 PP-loop family protein YP_002425839.1 1220791 D 243159 CDS YP_002425840.1 218668035 7135773 1221566..1222408 1 NC_011761.1 identified by similarity to SP:P45803; match to protein family HMM PF01430; 33 kDa chaperonin 1222408 hslO 7135773 hslO Acidithiobacillus ferrooxidans ATCC 23270 33 kDa chaperonin YP_002425840.1 1221566 D 243159 CDS YP_002425841.1 218665529 7135869 complement(1223126..1223632) 1 NC_011761.1 identified by similarity to GB:CAD85910.1; hypothetical protein 1223632 7135869 AFE_1412 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425841.1 1223126 R 243159 CDS YP_002425842.1 218667280 7135900 complement(1223629..1223958) 1 NC_011761.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; regulator PrlF 1223958 sohA 7135900 sohA Acidithiobacillus ferrooxidans ATCC 23270 regulator PrlF YP_002425842.1 1223629 R 243159 CDS YP_002425843.1 218666407 7135124 complement(1224098..1224400) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1224400 7135124 AFE_1414 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425843.1 1224098 R 243159 CDS YP_002425844.1 218667778 7134351 complement(1224415..1224681) 1 NC_011761.1 identified by similarity to GB:BAC17067.1; hypothetical protein 1224681 7134351 AFE_1415 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425844.1 1224415 R 243159 CDS YP_002425845.1 218667126 7134453 complement(1224727..1224927) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1224927 7134453 AFE_1416 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425845.1 1224727 R 243159 CDS YP_002425846.1 218665278 7134672 complement(1225026..1225520) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1225520 7134672 AFE_1417 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002425846.1 1225026 R 243159 CDS YP_002425847.1 218665082 7136219 complement(1225517..1225789) 1 NC_011761.1 identified by match to protein family HMM PF08681; hypothetical protein 1225789 7136219 AFE_1418 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425847.1 1225517 R 243159 CDS YP_002425848.1 218667523 7135012 complement(1225870..1226199) 1 NC_011761.1 identified by similarity to GB:CAD14535.1; hypothetical protein 1226199 7135012 AFE_1419 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425848.1 1225870 R 243159 CDS YP_002425849.1 218665340 7137005 1226511..1226786 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1226786 7137005 AFE_1421 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425849.1 1226511 D 243159 CDS YP_002425850.1 218666685 7136121 complement(1226866..1227687) 1 NC_011761.1 identified by similarity to PIR:F87663; match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1227687 7136121 AFE_1422 Acidithiobacillus ferrooxidans ATCC 23270 Ser/Thr protein phosphatase family protein YP_002425850.1 1226866 R 243159 CDS YP_002425851.1 218665777 7134556 complement(1227847..1228188) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1228188 7134556 AFE_1423 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425851.1 1227847 R 243159 CDS YP_002425852.1 218665175 7136092 1228243..1228371 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1228371 7136092 AFE_1424 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425852.1 1228243 D 243159 CDS YP_002425853.1 218667161 7134327 1228383..1229504 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1229504 7134327 AFE_1425 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425853.1 1228383 D 243159 CDS YP_002425854.1 218665810 7134709 1229538..1230752 1 NC_011761.1 identified by match to protein family HMM PF00534; glycoside hydrolase 1230752 7134709 AFE_1427 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002425854.1 1229538 D 243159 CDS YP_002425855.1 218665525 7135364 complement(1230731..1230991) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1230991 7135364 AFE_1426 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425855.1 1230731 R 243159 CDS YP_002425856.1 218666082 7135896 1231481..1232929 1 NC_011761.1 identified by similarity to GB:CAA07031.1; cytochrome c 1232929 7135896 AFE_1428 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c YP_002425856.1 1231481 D 243159 CDS YP_002425857.1 218667453 7137002 1232944..1233585 1 NC_011761.1 identified by similarity to SP:P74917; cytochrome c552 1233585 7137002 AFE_1429 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c552 YP_002425857.1 1232944 D 243159 CDS YP_002425858.1 218665540 7136744 complement(1233659..1234627) 1 NC_011761.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter 1234627 7136744 AFE_1430 Acidithiobacillus ferrooxidans ATCC 23270 cation diffusion facilitator family transporter YP_002425858.1 1233659 R 243159 CDS YP_002425859.1 218667142 7135912 1234731..1234967 1 NC_011761.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1234967 7135912 AFE_1431 Acidithiobacillus ferrooxidans ATCC 23270 MerR family transcriptional regulator YP_002425859.1 1234731 D 243159 CDS YP_002425860.1 218666480 7134689 1234964..1235518 1 NC_011761.1 lipoprotein 1235518 7134689 AFE_1432 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002425860.1 1234964 D 243159 CDS YP_002425861.1 218667828 7136290 1235720..1236976 1 NC_011761.1 identified by similarity to SP:P25888; match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent RNA helicase RhlE 1236976 rhlE 7136290 rhlE Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent RNA helicase RhlE YP_002425861.1 1235720 D 243159 CDS YP_002425862.1 218665852 7134906 1237096..1237827 1 NC_011761.1 identified by similarity to SP:P45605; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR02154; DNA-binding response regulator PhoB 1237827 phoB 7134906 phoB Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator PhoB YP_002425862.1 1237096 D 243159 CDS YP_002425863.1 218665237 7135407 1237889..1239217 1 NC_011761.1 identified by similarity to SP:P08400; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR02966; phosphate regulon sensor protein PhoR 1239217 phoR 7135407 phoR Acidithiobacillus ferrooxidans ATCC 23270 phosphate regulon sensor protein PhoR YP_002425863.1 1237889 D 243159 CDS YP_002425864.1 218665988 7135725 1239287..1240306 1 NC_011761.1 identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter substrate-binding protein 1240306 pstS-2 7135725 pstS-2 Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter substrate-binding protein YP_002425864.1 1239287 D 243159 CDS YP_002425865.1 218666654 7134202 1240363..1241340 1 NC_011761.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 1241340 pstC-2 7134202 pstC-2 Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter permease YP_002425865.1 1240363 D 243159 CDS YP_002425866.1 218665751 7134525 1241337..1242191 1 NC_011761.1 identified by similarity to SP:P07654; match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 1242191 pstA 7134525 pstA Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter permease YP_002425866.1 1241337 D 243159 CDS YP_002425867.1 218666466 7136066 1242191..1242958 1 NC_011761.1 identified by similarity to SP:P07655; match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 1242958 pstB 7136066 pstB Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter ATP-binding protein YP_002425867.1 1242191 D 243159 CDS YP_002425868.1 218667194 7134412 1242970..1243683 1 NC_011761.1 identified by similarity to SP:P07656; match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system protein PhoU 1243683 phoU 7134412 phoU Acidithiobacillus ferrooxidans ATCC 23270 phosphate transport system protein PhoU YP_002425868.1 1242970 D 243159 CDS YP_002425869.1 218665458 7135587 1243686..1245197 1 NC_011761.1 identified by similarity to SP:Q9ZN70; match to protein family HMM PF02541; exopolyphosphatase 1245197 ppx 7135587 ppx Acidithiobacillus ferrooxidans ATCC 23270 exopolyphosphatase YP_002425869.1 1243686 D 243159 CDS YP_002425870.1 218668011 7135070 1245191..1245316 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1245316 7135070 AFE_1442 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425870.1 1245191 D 243159 CDS YP_002425871.1 218667300 7134776 1245451..1246041 1 NC_011761.1 identified by similarity to GB:AAP17563.1; DedA family membrane protein 1246041 7134776 AFE_1443 Acidithiobacillus ferrooxidans ATCC 23270 DedA family membrane protein YP_002425871.1 1245451 D 243159 CDS YP_002425872.1 218667004 7135144 1246246..1246998 1 NC_011761.1 identified by similarity to SP:P02351; match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 1246998 rpsB 7135144 rpsB Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S2 YP_002425872.1 1246246 D 243159 CDS YP_002425873.1 218665239 7134867 1247026..1247904 1 NC_011761.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1247904 tsf 7134867 tsf Acidithiobacillus ferrooxidans ATCC 23270 elongation factor Ts YP_002425873.1 1247026 D 243159 CDS YP_002425874.1 218666612 7135727 1247905..1248630 1 NC_011761.1 identified by similarity to GB:BAC07813.1; match to protein family HMM PF00696; match to protein family HMM TIGR02075; uridylate kinase 1248630 pyrH 7135727 pyrH Acidithiobacillus ferrooxidans ATCC 23270 uridylate kinase YP_002425874.1 1247905 D 243159 CDS YP_002425875.1 218667967 7135343 1248627..1249187 1 NC_011761.1 identified by similarity to SP:P16174; match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 1249187 frr 7135343 frr Acidithiobacillus ferrooxidans ATCC 23270 ribosome recycling factor YP_002425875.1 1248627 D 243159 CDS YP_002425876.1 218665933 7135274 1249221..1249952 1 NC_011761.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; undecaprenyl diphosphate synthase 1249952 uppS 7135274 uppS Acidithiobacillus ferrooxidans ATCC 23270 undecaprenyl diphosphate synthase YP_002425876.1 1249221 D 243159 CDS YP_002425877.1 218665088 7134143 1249934..1250749 1 NC_011761.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 1250749 cdsA 7134143 cdsA Acidithiobacillus ferrooxidans ATCC 23270 phosphatidate cytidylyltransferase YP_002425877.1 1249934 D 243159 CDS YP_002425878.1 218665633 7135018 1250740..1251921 1 NC_011761.1 identified by similarity to SP:P45568; match to protein family HMM PF02670; match to protein family HMM PF08436; match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1251921 dxr 7135018 dxr Acidithiobacillus ferrooxidans ATCC 23270 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002425878.1 1250740 D 243159 CDS YP_002425879.1 218667477 7135576 1251937..1253295 1 NC_011761.1 identified by similarity to SP:P37764; match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054; membrane-associated zinc metalloprotease 1253295 7135576 AFE_1451 Acidithiobacillus ferrooxidans ATCC 23270 membrane-associated zinc metalloprotease YP_002425879.1 1251937 D 243159 CDS YP_002425880.1 218667934 7136769 1253292..1255637 1 NC_011761.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM TIGR03303; OMP85 family outer membrane protein 1255637 7136769 AFE_1452 Acidithiobacillus ferrooxidans ATCC 23270 OMP85 family outer membrane protein YP_002425880.1 1253292 D 243159 CDS YP_002425881.1 218667023 7135241 1255655..1256191 1 NC_011761.1 identified by match to protein family HMM PF03938; OmpH family outer membrane protein 1256191 7135241 AFE_1453 Acidithiobacillus ferrooxidans ATCC 23270 OmpH family outer membrane protein YP_002425881.1 1255655 D 243159 CDS YP_002425882.1 218667954 7134888 1256193..1257254 1 NC_011761.1 identified by similarity to SP:P21645; match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853; UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase 1257254 lpxD 7134888 lpxD Acidithiobacillus ferrooxidans ATCC 23270 UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase YP_002425882.1 1256193 D 243159 CDS YP_002425883.1 218667522 7135261 1257247..1257693 1 NC_011761.1 identified by match to protein family HMM PF07977; match to protein family HMM TIGR01750; beta-hydroxyacyl-(ACP) dehydratase FabZ 1257693 fabZ 7135261 fabZ Acidithiobacillus ferrooxidans ATCC 23270 beta-hydroxyacyl-(ACP) dehydratase FabZ YP_002425883.1 1257247 D 243159 CDS YP_002425884.1 218665078 7136387 1257690..1258472 1 NC_011761.1 identified by similarity to SP:P10440; match to protein family HMM PF00132; match to protein family HMM TIGR01852; acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine acyltransferase 1258472 lpxA 7136387 lpxA Acidithiobacillus ferrooxidans ATCC 23270 acyl-(acyl-carrier-protein)-UDP-N- acetylglucosamine acyltransferase YP_002425884.1 1257690 D 243159 CDS YP_002425885.1 218666343 7135007 1258469..1259410 1 NC_011761.1 identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase, NAD-binding 1259410 7135007 AFE_1457 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, NAD-binding YP_002425885.1 1258469 D 243159 CDS YP_002425886.1 218665336 7136482 1259456..1260565 1 NC_011761.1 identified by similarity to SP:P15263; match to protein family HMM PF01041; match to protein family HMM PF01212; pleiotropic regulatory protein 1260565 7136482 AFE_1458 Acidithiobacillus ferrooxidans ATCC 23270 pleiotropic regulatory protein YP_002425886.1 1259456 D 243159 CDS YP_002425887.1 218666672 7136635 1260570..1261697 1 NC_011761.1 identified by similarity to GB:CAA60866.1; match to protein family HMM PF02684; match to protein family HMM TIGR00215; lipid A disaccharide synthase LpxB 1261697 lpxB 7136635 lpxB Acidithiobacillus ferrooxidans ATCC 23270 lipid A disaccharide synthase LpxB YP_002425887.1 1260570 D 243159 CDS YP_002425888.1 218665608 7134543 1261711..1262301 1 NC_011761.1 identified by similarity to SP:P10442; match to protein family HMM PF01351; ribonuclease HII 1262301 rnhB 7134543 rnhB Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease HII YP_002425888.1 1261711 D 243159 CDS YP_002425889.1 218665927 7135551 1262301..1265801 1 NC_011761.1 identified by similarity to SP:P10443; match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1265801 dnaE 7135551 dnaE Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit alpha YP_002425889.1 1262301 D 243159 CDS YP_002425890.1 218667236 7134137 1265836..1266786 1 NC_011761.1 identified by match to protein family HMM PF03255; match to protein family HMM TIGR00513; acetyl-CoA carboxylase, carboxyl transferase subunit alpha 1266786 accA 7134137 accA Acidithiobacillus ferrooxidans ATCC 23270 acetyl-CoA carboxylase, carboxyl transferase subunit alpha YP_002425890.1 1265836 D 243159 CDS YP_002425891.1 218665676 7135630 1266764..1268158 1 NC_011761.1 identified by similarity to SP:P52097; match to protein family HMM PF01171; match to protein family HMM PF01507; match to protein family HMM PF06508; match to protein family HMM PF09179; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 1268158 tilS 7135630 tilS Acidithiobacillus ferrooxidans ATCC 23270 tRNA(Ile)-lysidine synthetase YP_002425891.1 1266764 D 243159 CDS YP_002425892.1 218667971 7137159 complement(1268122..1269453) 1 NC_011761.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1269453 pyrC-2 7137159 pyrC-2 Acidithiobacillus ferrooxidans ATCC 23270 dihydroorotase YP_002425892.1 1268122 R 243159 CDS YP_002425893.1 218666813 7134580 complement(1269458..1269922) 1 NC_011761.1 identified by similarity to SP:P18274; match to protein family HMM PF01258; match to protein family HMM TIGR02420; dnaK suppressor protein 1269922 dksA 7134580 dksA Acidithiobacillus ferrooxidans ATCC 23270 dnaK suppressor protein YP_002425893.1 1269458 R 243159 CDS YP_002425894.1 218665816 7137062 1270089..1270853 1 NC_011761.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase 1270853 7137062 AFE_1466 Acidithiobacillus ferrooxidans ATCC 23270 HAD-superfamily hydrolase YP_002425894.1 1270089 D 243159 CDS YP_002425895.1 218666587 7135370 complement(1270989..1271465) 1 NC_011761.1 Fur family transcriptional regulator 1271465 7135370 AFE_1467 Acidithiobacillus ferrooxidans ATCC 23270 Fur family transcriptional regulator YP_002425895.1 1270989 R 243159 CDS YP_002425896.1 218667635 7135317 1271583..1272062 1 NC_011761.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; antioxidant, AhpC/Tsa family 1272062 7135317 AFE_1468 Acidithiobacillus ferrooxidans ATCC 23270 antioxidant, AhpC/Tsa family YP_002425896.1 1271583 D 243159 CDS YP_002425897.1 218665385 7135809 1272059..1273468 1 NC_011761.1 identified by match to protein family HMM PF02562; PhoH family protein 1273468 7135809 AFE_1469 Acidithiobacillus ferrooxidans ATCC 23270 PhoH family protein YP_002425897.1 1272059 D 243159 CDS YP_002425898.1 218667242 7136167 1273533..1275446 1 NC_011761.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1275446 speA 7136167 speA Acidithiobacillus ferrooxidans ATCC 23270 arginine decarboxylase YP_002425898.1 1273533 D 243159 CDS YP_002425899.1 218665250 7135636 complement(1275411..1275839) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1275839 7135636 AFE_1470 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425899.1 1275411 R 243159 CDS YP_002425900.1 218666003 7135739 complement(1275874..1276557) 1 NC_011761.1 identified by match to protein family HMM PF01557; fumarylacetoacetate hydrolase family protein 1276557 7135739 AFE_1472 Acidithiobacillus ferrooxidans ATCC 23270 fumarylacetoacetate hydrolase family protein YP_002425900.1 1275874 R 243159 CDS YP_002425901.1 218666916 7134218 complement(1276554..1276829) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1276829 7134218 AFE_1473 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425901.1 1276554 R 243159 CDS YP_002425902.1 218667958 7134626 complement(1276826..1277446) 1 NC_011761.1 identified by similarity to SP:P39100; match to protein family HMM PF02798; glutathione S-transferase 1277446 7134626 AFE_1474 Acidithiobacillus ferrooxidans ATCC 23270 glutathione S-transferase YP_002425902.1 1276826 R 243159 CDS YP_002425903.1 218667009 7135265 complement(1277446..1277799) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1277799 7135265 AFE_1475 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425903.1 1277446 R 243159 CDS YP_002425904.1 218666867 7134872 complement(1277816..1278310) 1 NC_011761.1 identified by similarity to GB:AAA64729.1; hypothetical protein 1278310 7134872 AFE_1476 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425904.1 1277816 R 243159 CDS YP_002425905.1 218667422 7137116 complement(1278329..1278616) 1 NC_011761.1 identified by similarity to SP:Q53207; ferredoxin-like protein 1278616 fixX 7137116 fixX Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin-like protein YP_002425905.1 1278329 R 243159 CDS YP_002425906.1 218667783 7136946 complement(1278613..1279911) 1 NC_011761.1 identified by similarity to SP:P10331; match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF03486; fixC protein 1279911 fixC 7136946 fixC Acidithiobacillus ferrooxidans ATCC 23270 fixC protein YP_002425906.1 1278613 R 243159 CDS YP_002425907.1 218666399 7134458 complement(1279928..1281022) 1 NC_011761.1 identified by similarity to SP:P26483; match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha 1281022 fixB 7134458 fixB Acidithiobacillus ferrooxidans ATCC 23270 electron transfer flavoprotein subunit alpha YP_002425907.1 1279928 R 243159 CDS YP_002425908.1 218667916 7134343 complement(1281042..1281884) 1 NC_011761.1 identified by similarity to SP:P53577; match to protein family HMM PF01012; electron transfer flavoprotein subunit beta 1281884 fixA 7134343 fixA Acidithiobacillus ferrooxidans ATCC 23270 electron transfer flavoprotein subunit beta YP_002425908.1 1281042 R 243159 CDS YP_002425909.1 218666019 7135223 1282056..1282154 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1282154 7135223 AFE_1481 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425909.1 1282056 D 243159 CDS YP_002425910.1 218665206 7134235 1282389..1283000 1 NC_011761.1 identified by similarity to GB:AAN51174.1; hypothetical protein 1283000 7134235 AFE_1482 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425910.1 1282389 D 243159 CDS YP_002425911.1 218665825 7135694 1283011..1285275 1 NC_011761.1 identified by match to protein family HMM PF00593; TonB-dependent receptor 1285275 7135694 AFE_1483 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002425911.1 1283011 D 243159 CDS YP_002425912.1 218665520 7135379 1285369..1286565 1 NC_011761.1 identified by similarity to GB:AAM72768.1; hypothetical protein 1286565 7135379 AFE_1484 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425912.1 1285369 D 243159 CDS YP_002425913.1 218667595 7135891 1286578..1287231 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 1287231 7135891 AFE_1485 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002425913.1 1286578 D 243159 CDS YP_002425914.1 218667344 7135768 1287233..1287628 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 1287628 7135768 AFE_1486 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002425914.1 1287233 D 243159 CDS YP_002425915.1 218665208 7135189 1287625..1288359 1 NC_011761.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein 1288359 7135189 AFE_1487 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002425915.1 1287625 D 243159 CDS YP_002425916.1 218666902 7135696 1288372..1288551 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1288551 7135696 AFE_1488 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425916.1 1288372 D 243159 CDS YP_002425917.1 218665443 7134612 1288563..1289594 1 NC_011761.1 identified by match to protein family HMM PF01497; iron compound ABC transporter periplasmic iron-binding protein 1289594 7134612 AFE_1489 Acidithiobacillus ferrooxidans ATCC 23270 iron compound ABC transporter periplasmic iron-binding protein YP_002425917.1 1288563 D 243159 CDS YP_002425918.1 218667196 7135055 1289591..1290574 1 NC_011761.1 identified by match to protein family HMM PF01032; ABC transporter permease, FecCD family 1290574 7135055 AFE_1490 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease, FecCD family YP_002425918.1 1289591 D 243159 CDS YP_002425919.1 218666168 7135589 1290571..1291362 1 NC_011761.1 identified by similarity to SP:P15031; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein 1291362 7135589 AFE_1491 Acidithiobacillus ferrooxidans ATCC 23270 iron compound ABC transporter ATP-binding protein YP_002425919.1 1290571 D 243159 CDS YP_002425920.1 218665196 7134068 1291388..1293523 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 1293523 7134068 AFE_1492 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002425920.1 1291388 D 243159 CDS YP_002425921.1 218667568 7135683 1293551..1294270 1 NC_011761.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR01256; molybdenum ABC transporter periplasmic molybdate-binding protein 1294270 7135683 AFE_1493 Acidithiobacillus ferrooxidans ATCC 23270 molybdenum ABC transporter periplasmic molybdate-binding protein YP_002425921.1 1293551 D 243159 CDS YP_002425922.1 218666958 7136434 1294290..1295324 1 NC_011761.1 identified by match to protein family HMM PF01497; iron compound ABC transporter periplasmic iron-binding protein 1295324 7136434 AFE_1494 Acidithiobacillus ferrooxidans ATCC 23270 iron compound ABC transporter periplasmic iron-binding protein YP_002425922.1 1294290 D 243159 CDS YP_002425923.1 218665180 7134821 1295321..1296346 1 NC_011761.1 identified by match to protein family HMM PF01032; ABC transporter permease, FecCD family 1296346 7134821 AFE_1495 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease, FecCD family YP_002425923.1 1295321 D 243159 CDS YP_002425924.1 218666073 7135666 complement(1296408..1297610) 1 NC_011761.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter 1297610 7135666 AFE_1496 Acidithiobacillus ferrooxidans ATCC 23270 cation diffusion facilitator family transporter YP_002425924.1 1296408 R 243159 CDS YP_002425925.1 218666966 7136993 complement(1297694..1299022) 1 NC_011761.1 identified by match to protein family HMM PF03573; hypothetical protein 1299022 7136993 AFE_1497 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425925.1 1297694 R 243159 CDS YP_002425926.1 218667165 7134829 complement(1299188..1300111) 1 NC_011761.1 identified by match to protein family HMM PF01547; ABC transporter substrate-binding protein 1300111 7134829 AFE_1498 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter substrate-binding protein YP_002425926.1 1299188 R 243159 CDS YP_002425927.1 218668069 7134714 1300356..1302017 1 NC_011761.1 identified by match to protein family HMM PF00004; AAA ATPase 1302017 7134714 AFE_1499 Acidithiobacillus ferrooxidans ATCC 23270 AAA ATPase YP_002425927.1 1300356 D 243159 CDS YP_002425928.1 218665870 7136805 1302060..1302374 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1302374 7136805 AFE_1500 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425928.1 1302060 D 243159 CDS YP_002425929.1 218665293 7135425 complement(1302512..1302742) 1 NC_011761.1 identified by similarity to GB:AAN66836.1; match to protein family HMM TIGR02605; hypothetical protein 1302742 7135425 AFE_1501 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425929.1 1302512 R 243159 CDS YP_002425930.1 218665401 7136234 complement(1302812..1303594) 1 NC_011761.1 identified by match to protein family HMM PF00023; match to protein family HMM PF00581; ankyrin repeat domain-containing protein 1303594 7136234 AFE_1502 Acidithiobacillus ferrooxidans ATCC 23270 ankyrin repeat domain-containing protein YP_002425930.1 1302812 R 243159 CDS YP_002425931.1 218665983 7136183 complement(1303591..1305207) 1 NC_011761.1 nitroreductase 1305207 7136183 AFE_1503 Acidithiobacillus ferrooxidans ATCC 23270 nitroreductase YP_002425931.1 1303591 R 243159 CDS YP_002425932.1 218665301 7134197 complement(1305272..1305604) 1 NC_011761.1 identified by similarity to SP:P26481; match to protein family HMM PF03206; nifW protein 1305604 7134197 AFE_1504 Acidithiobacillus ferrooxidans ATCC 23270 nifW protein YP_002425932.1 1305272 R 243159 CDS YP_002425933.1 218666622 7136242 complement(1305640..1306416) 1 NC_011761.1 identified by similarity to SP:Q06750; match to protein family HMM PF00132; match to protein family HMM TIGR01172; serine O-acetyltransferase 1306416 cysE-1 7136242 cysE-1 Acidithiobacillus ferrooxidans ATCC 23270 serine O-acetyltransferase YP_002425933.1 1305640 R 243159 CDS YP_002425934.1 218665727 7135353 complement(1306432..1307592) 1 NC_011761.1 identified by similarity to SP:Q44290; match to protein family HMM PF00682; match to protein family HMM TIGR02660; homocitrate synthase 1307592 nifV 7135353 nifV Acidithiobacillus ferrooxidans ATCC 23270 homocitrate synthase YP_002425934.1 1306432 R 243159 CDS YP_002425935.1 218667100 7136042 complement(1307585..1308793) 1 NC_011761.1 identified by similarity to SP:O54055; match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR03402; cysteine desulfurase 1308793 iscS-2 7136042 iscS-2 Acidithiobacillus ferrooxidans ATCC 23270 cysteine desulfurase YP_002425935.1 1307585 R 243159 CDS YP_002425936.1 218667946 7136700 complement(1308796..1309671) 1 NC_011761.1 identified by similarity to SP:P05340; match to protein family HMM PF01106; match to protein family HMM PF01592; match to protein family HMM PF04324; match to protein family HMM TIGR02000; nitrogen fixation protein nifU 1309671 7136700 AFE_1508 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen fixation protein nifU YP_002425936.1 1308796 R 243159 CDS YP_002425937.1 218667051 7135253 complement(1309676..1310044) 1 NC_011761.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein 1310044 7135253 AFE_1509 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster assembly accessory protein YP_002425937.1 1309676 R 243159 CDS YP_002425938.1 218666344 7136651 complement(1310302..1310895) 1 NC_011761.1 identified by similarity to GB:AAB66329.1; hypothetical protein 1310895 7136651 AFE_1510 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425938.1 1310302 R 243159 CDS YP_002425939.1 218665600 7136483 complement(1310962..1311615) 1 NC_011761.1 identified by match to protein family HMM PF04891; nitrogen fixation protein NifQ 1311615 7136483 AFE_1511 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen fixation protein NifQ YP_002425939.1 1310962 R 243159 CDS YP_002425940.1 218666656 7135543 complement(1311637..1311945) 1 NC_011761.1 identified by similarity to SP:P46036; match to protein family HMM PF00037; match to protein family HMM TIGR02936; ferredoxin 1311945 7135543 AFE_1512 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425940.1 1311637 R 243159 CDS YP_002425941.1 218666789 7134527 complement(1311950..1312213) 1 NC_011761.1 identified by similarity to GB:AAK51500.1; match to protein family HMM PF05082; hypothetical protein 1312213 7134527 AFE_1513 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425941.1 1311950 R 243159 CDS YP_002425942.1 218666158 7137038 complement(1312271..1312738) 1 NC_011761.1 identified by similarity to GB:BAC47013.1; match to protein family HMM PF03270; match to protein family HMM TIGR02935; hypothetical protein 1312738 7137038 AFE_1514 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425942.1 1312271 R 243159 CDS YP_002425943.1 218666443 7134058 complement(1312731..1313147) 1 NC_011761.1 identified by similarity to SP:P19078; match to protein family HMM PF02579; match to protein family HMM TIGR02663; nitrogen fixation protein NifX 1313147 nifX 7134058 nifX Acidithiobacillus ferrooxidans ATCC 23270 nitrogen fixation protein NifX YP_002425943.1 1312731 R 243159 CDS YP_002425944.1 218667548 7134389 complement(1313200..1314561) 1 NC_011761.1 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 1314561 nifN 7134389 nifN Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_002425944.1 1313200 R 243159 CDS YP_002425945.1 218665869 7136414 complement(1314558..1315949) 1 NC_011761.1 functions with NifN to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifE 1315949 nifE 7136414 nifE Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase molybdenum-cofactor biosynthesis protein NifE YP_002425945.1 1314558 R 243159 CDS YP_002425946.1 218667688 7135424 complement(1315968..1316312) 1 NC_011761.1 identified by match to protein family HMM PF00111; ferredoxin 1316312 7135424 AFE_1518 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425946.1 1315968 R 243159 CDS YP_002425947.1 218665337 7135471 complement(1316337..1316681) 1 NC_011761.1 identified by similarity to SP:P37097; match to protein family HMM PF00111; ferredoxin 1316681 7135471 AFE_1519 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425947.1 1316337 R 243159 CDS YP_002425948.1 218665986 7136118 complement(1316743..1318302) 1 NC_011761.1 identified by match to protein family HMM PF00148; match to protein family HMM TIGR01286; nitrogenase molybdenum-iron protein subunit beta 1318302 nifK 7136118 nifK Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase molybdenum-iron protein subunit beta YP_002425948.1 1316743 R 243159 CDS YP_002425949.1 218666771 7134200 complement(1318381..1319856) 1 NC_011761.1 identified by similarity to SP:P06121; match to protein family HMM PF00148; match to protein family HMM TIGR01282; match to protein family HMM TIGR01862; nitrogenase molybdenum-iron protein subunit alpha 1319856 nifD 7134200 nifD Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase molybdenum-iron protein subunit alpha YP_002425949.1 1318381 R 243159 CDS YP_002425950.1 218667119 7137267 complement(1319920..1320810) 1 NC_011761.1 nitrogenase iron protein; nitrogenase component 2; with component 1, an molybdenum-iron protein, catalyzes the fixation of nitrogen to ammonia; nitrogen reductase provides electrons to the nitrogenase complex; in R. etli there are three essentially identical copies of nifH which are actively expressed during symbiosis; nitrogenase reductase 1320810 nifH 7137267 nifH Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase reductase YP_002425950.1 1319920 R 243159 CDS YP_002425951.1 218666326 7134665 1321269..1321655 1 NC_011761.1 response regulator 1321655 7134665 AFE_1523 Acidithiobacillus ferrooxidans ATCC 23270 response regulator YP_002425951.1 1321269 D 243159 CDS YP_002425952.1 218665689 7136465 1321674..1322501 1 NC_011761.1 identified by similarity to SP:P14299; NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase 1322501 draT 7136465 draT Acidithiobacillus ferrooxidans ATCC 23270 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase YP_002425952.1 1321674 D 243159 CDS YP_002425953.1 218668144 7137172 1322511..1323899 1 NC_011761.1 identified by match to protein family HMM PF03747; match to protein family HMM TIGR01616; match to protein family HMM TIGR02662; ADP-ribosyl-[dinitrogen reductase] hydrolase 1323899 draG 7137172 draG Acidithiobacillus ferrooxidans ATCC 23270 ADP-ribosyl-[dinitrogen reductase] hydrolase YP_002425953.1 1322511 D 243159 CDS YP_002425954.1 218665550 7135963 1323925..1325562 1 NC_011761.1 identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR01817; Nif-specific regulatory protein 1325562 nifA 7135963 nifA Acidithiobacillus ferrooxidans ATCC 23270 Nif-specific regulatory protein YP_002425954.1 1323925 D 243159 CDS YP_002425955.1 218665947 7135922 complement(1325559..1325702) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1325702 7135922 AFE_1526 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425955.1 1325559 R 243159 CDS YP_002425956.1 218667235 7134157 1325832..1325933 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1325933 7134157 AFE_1528 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425956.1 1325832 D 243159 CDS YP_002425957.1 218667518 7135629 1325956..1327455 1 NC_011761.1 identified by match to protein family HMM PF02579; match to protein family HMM PF04055; match to protein family HMM TIGR01290; nitrogenase cofactor biosynthesis protein NifB 1327455 nifB 7135629 nifB Acidithiobacillus ferrooxidans ATCC 23270 nitrogenase cofactor biosynthesis protein NifB YP_002425957.1 1325956 D 243159 CDS YP_002425958.1 218666144 7136383 1327506..1327724 1 NC_011761.1 identified by similarity to SP:P00207; match to protein family HMM PF00037; ferredoxin 1327724 7136383 AFE_1530 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425958.1 1327506 D 243159 CDS YP_002425959.1 218667001 7134044 1327734..1328069 1 NC_011761.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein 1328069 7134044 AFE_1531 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster assembly accessory protein YP_002425959.1 1327734 D 243159 CDS YP_002425960.1 218667902 7134864 1328110..1328340 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1328340 7134864 AFE_1532 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425960.1 1328110 D 243159 CDS YP_002425961.1 218665739 7135209 1328337..1328846 1 NC_011761.1 identified by similarity to SP:P23177; hypothetical protein 1328846 7135209 AFE_1533 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425961.1 1328337 D 243159 CDS YP_002425962.1 218666645 7136054 1328839..1329630 1 NC_011761.1 identified by match to protein family HMM PF01816; leucine rich repeat protein 1329630 7136054 AFE_1534 Acidithiobacillus ferrooxidans ATCC 23270 leucine rich repeat protein YP_002425962.1 1328839 D 243159 CDS YP_002425963.1 218665651 7134516 1329627..1329920 1 NC_011761.1 identified by match to protein family HMM PF04319; NifZ domain-containing protein 1329920 7134516 AFE_1535 Acidithiobacillus ferrooxidans ATCC 23270 NifZ domain-containing protein YP_002425963.1 1329627 D 243159 CDS YP_002425964.1 218665308 7137134 1329920..1330171 1 NC_011761.1 NifZ domain-containing protein 1330171 7137134 AFE_1536 Acidithiobacillus ferrooxidans ATCC 23270 NifZ domain-containing protein YP_002425964.1 1329920 D 243159 CDS YP_002425965.1 218667163 7136249 1330168..1331349 1 NC_011761.1 identified by similarity to SP:O54055; match to protein family HMM PF00266; cysteine desulfurase 1331349 iscS-1 7136249 iscS-1 Acidithiobacillus ferrooxidans ATCC 23270 cysteine desulfurase YP_002425965.1 1330168 D 243159 CDS YP_002425966.1 218666165 7134711 1331365..1331574 1 NC_011761.1 identified by similarity to SP:P09427; match to protein family HMM PF06988; match to protein family HMM TIGR02934; nitrogen fixation protein 1331574 7134711 AFE_1538 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen fixation protein YP_002425966.1 1331365 D 243159 CDS YP_002425967.1 218667500 7134065 1331579..1331851 1 NC_011761.1 identified by similarity to GB:AAA64714.1; hypothetical protein 1331851 7134065 AFE_1539 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425967.1 1331579 D 243159 CDS YP_002425968.1 218667319 7136365 1331848..1332990 1 NC_011761.1 identified by match to protein family HMM PF01041; DegT/DnrJ/EryC1/StrS family aminotransferase 1332990 7136365 AFE_1540 Acidithiobacillus ferrooxidans ATCC 23270 DegT/DnrJ/EryC1/StrS family aminotransferase YP_002425968.1 1331848 D 243159 CDS YP_002425969.1 218667601 7135163 1333032..1333337 1 NC_011761.1 identified by similarity to SP:P44428; match to protein family HMM PF00111; ferredoxin 1333337 7135163 AFE_1541 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002425969.1 1333032 D 243159 CDS YP_002425970.1 218665822 7135775 1333348..1333572 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1333572 7135775 AFE_1542 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425970.1 1333348 D 243159 CDS YP_002425971.1 218666716 7135376 1333585..1334412 1 NC_011761.1 identified by similarity to GB:AAF61911.1; hypothetical protein 1334412 7135376 AFE_1543 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425971.1 1333585 D 243159 CDS YP_002425972.1 218667379 7137211 complement(1334461..1335315) 1 NC_011761.1 identified by similarity to SP:P59245; match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR01334; pyrophosphorylase 1335315 7137211 AFE_1544 Acidithiobacillus ferrooxidans ATCC 23270 pyrophosphorylase YP_002425972.1 1334461 R 243159 CDS YP_002425973.1 218666112 7136901 complement(1335439..1335645) 1 NC_011761.1 identified by match to protein family HMM PF03459; match to protein family HMM TIGR00638; molybdenum-pterin-binding protein 1335645 7136901 AFE_1545 Acidithiobacillus ferrooxidans ATCC 23270 molybdenum-pterin-binding protein YP_002425973.1 1335439 R 243159 CDS YP_002425974.1 218667237 7137033 complement(1335712..1337139) 1 NC_011761.1 identified by similarity to SP:P25526; match to protein family HMM PF00171; succinate-semialdehyde dehydrogenase 1337139 7137033 AFE_1546 Acidithiobacillus ferrooxidans ATCC 23270 succinate-semialdehyde dehydrogenase YP_002425974.1 1335712 R 243159 CDS YP_002425975.1 218666842 7135631 1337338..1337730 1 NC_011761.1 identified by similarity to SP:Q9CC59; match to protein family HMM PF01152; heme-binding protein 1337730 7135631 AFE_1548 Acidithiobacillus ferrooxidans ATCC 23270 heme-binding protein YP_002425975.1 1337338 D 243159 CDS YP_002425976.1 218667285 7137091 complement(1337727..1339145) 1 NC_011761.1 identified by match to protein family HMM PF07690; hypothetical protein 1339145 7137091 AFE_1547 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425976.1 1337727 R 243159 CDS YP_002425977.1 218667578 7135129 1339329..1339901 1 NC_011761.1 identified by similarity to GB:AAM36227.1; hypothetical protein 1339901 7135129 AFE_1549 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425977.1 1339329 D 243159 CDS YP_002425978.1 218665573 7135749 1339898..1340809 1 NC_011761.1 identified by match to protein family HMM PF00294; carbohydrate kinase, PfkB family 1340809 7135749 AFE_1550 Acidithiobacillus ferrooxidans ATCC 23270 carbohydrate kinase, PfkB family YP_002425978.1 1339898 D 243159 CDS YP_002425979.1 218666215 7135945 1340802..1342946 1 NC_011761.1 identified by match to protein family HMM PF00534; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; match to protein family HMM TIGR02471; match to protein family HMM TIGR02472; sucrose phosphate synthase 1342946 7135945 AFE_1551 Acidithiobacillus ferrooxidans ATCC 23270 sucrose phosphate synthase YP_002425979.1 1340802 D 243159 CDS YP_002425980.1 218667992 7136571 1342876..1345320 1 NC_011761.1 identified by match to protein family HMM PF00534; match to protein family HMM PF00862; sucrose synthase 1345320 7136571 AFE_1552 Acidithiobacillus ferrooxidans ATCC 23270 sucrose synthase YP_002425980.1 1342876 D 243159 CDS YP_002425981.1 218665351 7134756 complement(1345465..1345989) 1 NC_011761.1 identified by similarity to SP:P09168; match to protein family HMM PF01035; match to protein family HMM PF02870; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 1345989 ogt-2 7134756 ogt-2 Acidithiobacillus ferrooxidans ATCC 23270 methylated-DNA--protein-cysteine methyltransferase YP_002425981.1 1345465 R 243159 CDS YP_002425982.1 218665566 7136132 complement(1346142..1346795) 1 NC_011761.1 identified by match to protein family HMM PF02656; hypothetical protein 1346795 7136132 AFE_1554 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425982.1 1346142 R 243159 CDS YP_002425983.1 218667294 7135830 complement(1347049..1348044) 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1348044 7135830 AFE_1556 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002425983.1 1347049 R 243159 CDS YP_002425984.1 218668075 7135138 1348464..1348751 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1348751 7135138 AFE_1558 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425984.1 1348464 D 243159 CDS YP_002425985.1 218666626 7136811 complement(1348643..1348876) 1 NC_011761.1 identified by similarity to GB:CAD29689.1; hypothetical protein 1348876 7136811 AFE_1557 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425985.1 1348643 R 243159 CDS YP_002425986.1 218665905 7134497 1349087..1349365 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1349365 7134497 AFE_1559 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425986.1 1349087 D 243159 CDS YP_002425987.1 218667662 7134115 1349368..1349706 1 NC_011761.1 identified by similarity to SP:Q9CLT7; hypothetical protein 1349706 7134115 AFE_1560 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425987.1 1349368 D 243159 CDS YP_002425988.1 218667135 7135445 complement(1349838..1350692) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1350692 7135445 AFE_1561 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425988.1 1349838 R 243159 CDS YP_002425989.1 218665796 7134682 complement(1350694..1351416) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1351416 7134682 AFE_1562 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425989.1 1350694 R 243159 CDS YP_002425990.1 218666796 7136111 complement(1351413..1351907) 1 NC_011761.1 repressor protein CI 1351907 7136111 AFE_1563 Acidithiobacillus ferrooxidans ATCC 23270 repressor protein CI YP_002425990.1 1351413 R 243159 CDS YP_002425991.1 218666578 7137045 1351989..1352213 1 NC_011761.1 Cro family transcriptional regulator 1352213 7137045 AFE_1564 Acidithiobacillus ferrooxidans ATCC 23270 Cro family transcriptional regulator YP_002425991.1 1351989 D 243159 CDS YP_002425992.1 218667873 7135308 1352265..1353326 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1353326 7135308 AFE_1565 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425992.1 1352265 D 243159 CDS YP_002425993.1 218665089 7136532 1353337..1354197 1 NC_011761.1 identified by similarity to SP:P07905; match to protein family HMM PF01695; DNA replication protein DnaC 1354197 7136532 AFE_1566 Acidithiobacillus ferrooxidans ATCC 23270 DNA replication protein DnaC YP_002425993.1 1353337 D 243159 CDS YP_002425994.1 218666156 7135019 1354194..1355390 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1355390 7135019 AFE_1567 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425994.1 1354194 D 243159 CDS YP_002425995.1 218665934 7134056 1355387..1356277 1 NC_011761.1 identified by match to protein family HMM PF02086; methyltransferase 1356277 7134056 AFE_1568 Acidithiobacillus ferrooxidans ATCC 23270 methyltransferase YP_002425995.1 1355387 D 243159 CDS YP_002425996.1 218666847 7134144 1356340..1356834 1 NC_011761.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 1356834 ssb-2 7134144 ssb-2 Acidithiobacillus ferrooxidans ATCC 23270 single-strand binding protein YP_002425996.1 1356340 D 243159 CDS YP_002425997.1 218665729 7137096 1356990..1357133 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1357133 7137096 AFE_1570 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425997.1 1356990 D 243159 CDS YP_002425998.1 218668052 7136044 1357636..1357788 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1357788 7136044 AFE_1571 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425998.1 1357636 D 243159 CDS YP_002425999.1 218665169 7134817 1357799..1364395 1 NC_011761.1 identified by similarity to GB:AAM41383.1; hypothetical protein 1364395 7134817 AFE_1572 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002425999.1 1357799 D 243159 CDS YP_002426000.1 218666223 7134321 1364395..1364712 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1364712 7134321 AFE_1573 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426000.1 1364395 D 243159 CDS YP_002426001.1 218667323 7136579 complement(1364998..1365981) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1365981 7136579 AFE_1574 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426001.1 1364998 R 243159 CDS YP_002426002.1 218667821 7135167 complement(1366160..1368442) 1 NC_011761.1 identified by similarity to SP:P08956; match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM PF08463; type I restriction-modification system, R subunit 1368442 7135167 AFE_1575 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, R subunit YP_002426002.1 1366160 R 243159 CDS YP_002426003.1 218666566 7134578 complement(1368452..1369651) 1 NC_011761.1 identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 1369651 7134578 AFE_1576 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system subunit S YP_002426003.1 1368452 R 243159 CDS YP_002426004.1 218667350 7135296 complement(1369648..1371102) 1 NC_011761.1 identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 1371102 7135296 AFE_1577 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, M subunit YP_002426004.1 1369648 R 243159 CDS YP_002426005.1 218666342 7136872 complement(1371201..1371575) 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 1371575 7136872 AFE_1578 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002426005.1 1371201 R 243159 CDS YP_002426006.1 218667623 7136481 complement(1371572..1371769) 1 NC_011761.1 identified by similarity to GB:AAK52344.1; hypothetical protein 1371769 7136481 AFE_1579 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426006.1 1371572 R 243159 CDS YP_002426007.1 218667670 7135797 1371912..1372154 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1372154 7135797 AFE_1581 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426007.1 1371912 D 243159 CDS YP_002426008.1 218666586 7135453 complement(1372085..1372264) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1372264 7135453 AFE_1580 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426008.1 1372085 R 243159 CDS YP_002426009.1 218665246 7135316 1372599..1373273 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1373273 7135316 AFE_1582 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426009.1 1372599 D 243159 CDS YP_002426010.1 218666994 7135735 1373270..1373593 1 NC_011761.1 identified by similarity to SP:P23302; match to protein family HMM PF00216; integration host factor subunit alpha 1373593 7135735 AFE_1583 Acidithiobacillus ferrooxidans ATCC 23270 integration host factor subunit alpha YP_002426010.1 1373270 D 243159 CDS YP_002426011.1 218667634 7134857 1373660..1373935 1 NC_011761.1 identified by match to protein family HMM PF00216; DNA-binding protein HU family protein 1373935 7134857 AFE_1584 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein HU family protein YP_002426011.1 1373660 D 243159 CDS YP_002426012.1 218666740 7135808 1373947..1374300 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1374300 7135808 AFE_1585 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426012.1 1373947 D 243159 CDS YP_002426013.1 218665856 7137235 1374309..1374530 1 NC_011761.1 identified by match to protein family HMM PF00216; HU family DNA-binding protein 1374530 7137235 AFE_1586 Acidithiobacillus ferrooxidans ATCC 23270 HU family DNA-binding protein YP_002426013.1 1374309 D 243159 CDS YP_002426014.1 218665027 7135411 1374531..1374755 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1374755 7135411 AFE_1587 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426014.1 1374531 D 243159 CDS YP_002426015.1 218667463 7134955 1374953..1375084 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1375084 7134955 AFE_1588 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426015.1 1374953 D 243159 CDS YP_002426016.1 218665607 7136754 complement(1375254..1375523) 1 NC_011761.1 identified by similarity to SP:Q47150; match to protein family HMM PF04221; match to protein family HMM TIGR02384; DNA-damage-inducible protein J 1375523 dinJ 7136754 dinJ Acidithiobacillus ferrooxidans ATCC 23270 DNA-damage-inducible protein J YP_002426016.1 1375254 R 243159 CDS YP_002426017.1 218667957 7135550 complement(1375548..1376444) 1 NC_011761.1 identified by similarity to GB:AAO08903.1; hypothetical protein 1376444 7135550 AFE_1590 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426017.1 1375548 R 243159 CDS YP_002426018.1 218667030 7135264 1376706..1377266 1 NC_011761.1 identified by similarity to PIR:AG0097; hypothetical protein 1377266 7135264 AFE_1591 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426018.1 1376706 D 243159 CDS YP_002426019.1 218665142 7135767 1378104..1378259 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1378259 7135767 AFE_1594 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426019.1 1378104 D 243159 CDS YP_002426020.1 218666525 7135394 complement(1378759..1379517) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1379517 7135394 AFE_1595 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426020.1 1378759 R 243159 CDS YP_002426021.1 218667817 7136337 complement(1379771..1379998) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1379998 7136337 AFE_1596 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426021.1 1379771 R 243159 CDS YP_002426022.1 218665763 7134492 complement(1379947..1380189) 1 NC_011761.1 transposase, degenerate 1380189 7134492 AFE_1597 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002426022.1 1379947 R 243159 CDS YP_002426023.1 218666056 7136078 complement(1380283..1380450) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1380450 7136078 AFE_1598 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426023.1 1380283 R 243159 CDS YP_002426024.1 218665411 7136976 complement(1380644..1380739) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1380739 7136976 AFE_1599 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426024.1 1380644 R 243159 CDS YP_002426025.1 218666061 7136193 complement(1380895..1381092) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1381092 7136193 AFE_1600 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426025.1 1380895 R 243159 CDS YP_002426026.1 218666590 7136981 complement(1381329..1381520) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1381520 7136981 AFE_1601 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426026.1 1381329 R 243159 CDS YP_002426027.1 218665632 7136803 complement(1382087..1383223) 1 NC_011761.1 identified by similarity to SP:P75774; match to protein family HMM PF01061; ABC transporter permease 1383223 7136803 AFE_1603 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426027.1 1382087 R 243159 CDS YP_002426028.1 218666993 7135575 complement(1383227..1384360) 1 NC_011761.1 identified by similarity to SP:P75775; match to protein family HMM PF01061; ABC transporter permease 1384360 7135575 AFE_1604 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426028.1 1383227 R 243159 CDS YP_002426029.1 218665354 7134856 complement(1384357..1385286) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1385286 7134856 AFE_1605 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002426029.1 1384357 R 243159 CDS YP_002426030.1 218666636 7136135 complement(1385300..1386247) 1 NC_011761.1 identified by similarity to SP:P75776; match to protein family HMM PF00005; ABC transporter ATP-binding protein 1386247 7136135 AFE_1606 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002426030.1 1385300 R 243159 CDS YP_002426031.1 218666032 7134507 complement(1386247..1387242) 1 NC_011761.1 identified by match to protein family HMM PF00529; secretion protein, HlyD family 1387242 7134507 AFE_1607 Acidithiobacillus ferrooxidans ATCC 23270 secretion protein, HlyD family YP_002426031.1 1386247 R 243159 CDS YP_002426032.1 218665489 7135952 1387656..1387853 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1387853 7135952 AFE_1609 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426032.1 1387656 D 243159 CDS YP_002426033.1 218666196 7136910 complement(1388762..1389091) 1 NC_011761.1 identified by match to protein family HMM PF01527; ISAfe7, transposase orfA 1389091 7136910 AFE_1610 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe7, transposase orfA YP_002426033.1 1388762 R 243159 CDS YP_002426034.1 218665315 7136552 complement(1389142..1390152) 1 NC_011761.1 identified by match to protein family HMM PF01609; match to protein family HMM PF02178; transposase 1390152 7136552 AFE_1611 Acidithiobacillus ferrooxidans ATCC 23270 transposase YP_002426034.1 1389142 R 243159 CDS YP_002426035.1 218667103 7136256 complement(1390245..1390361) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1390361 7136256 AFE_1612 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426035.1 1390245 R 243159 CDS YP_002426036.1 218668111 7136703 complement(1390753..1391325) 1 NC_011761.1 identified by similarity to GB:AAN62151.1; hypothetical protein 1391325 7136703 AFE_1613 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426036.1 1390753 R 243159 CDS YP_002426037.1 218666352 7136848 complement(1391326..1391790) 1 NC_011761.1 identified by match to protein family HMM PF00376; match to protein family HMM TIGR01764; excisionase domain-containing protein 1391790 7136848 AFE_1614 Acidithiobacillus ferrooxidans ATCC 23270 excisionase domain-containing protein YP_002426037.1 1391326 R 243159 CDS YP_002426038.1 218666610 7136491 1392226..1396575 1 NC_011761.1 identified by similarity to SP:P27189; match to protein family HMM PF08401; DNA primase TraC 1396575 7136491 AFE_1615 Acidithiobacillus ferrooxidans ATCC 23270 DNA primase TraC YP_002426038.1 1392226 D 243159 CDS YP_002426039.1 218665044 7135341 1396634..1397830 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1397830 7135341 AFE_1616 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426039.1 1396634 D 243159 CDS YP_002426040.1 218667557 7134973 1397827..1398105 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1398105 7134973 AFE_1617 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426040.1 1397827 D 243159 CDS YP_002426041.1 218666189 7136423 1398116..1398505 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1398505 7136423 AFE_1618 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426041.1 1398116 D 243159 CDS YP_002426042.1 218666874 7134090 1398528..1399487 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1399487 7134090 AFE_1619 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426042.1 1398528 D 243159 CDS YP_002426043.1 218667589 7134584 1399551..1400330 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1400330 7134584 AFE_1620 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426043.1 1399551 D 243159 CDS YP_002426044.1 218666751 7135760 1400330..1401880 1 NC_011761.1 identified by similarity to GB:CAD61135.1; hypothetical protein 1401880 7135760 AFE_1621 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426044.1 1400330 D 243159 CDS YP_002426045.1 218668053 7137246 1401941..1402057 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1402057 7137246 AFE_1622 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426045.1 1401941 D 243159 CDS YP_002426046.1 218667330 7135355 1402091..1402267 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1402267 7135355 AFE_1623 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426046.1 1402091 D 243159 CDS YP_002426047.1 218667813 7135174 1402741..1402920 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1402920 7135174 AFE_1624 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426047.1 1402741 D 243159 CDS YP_002426048.1 218665281 7134488 1403110..1403754 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1403754 7134488 AFE_1625 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426048.1 1403110 D 243159 CDS YP_002426049.1 218667380 7136222 1404035..1404139 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1404139 7136222 AFE_1626 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426049.1 1404035 D 243159 CDS YP_002426050.1 218665462 7136902 complement(1404171..1404365) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1404365 7136902 AFE_1627 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426050.1 1404171 R 243159 CDS YP_002426051.1 218666281 7135075 1404393..1404533 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1404533 7135075 AFE_1628 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426051.1 1404393 D 243159 CDS YP_002426052.1 218666807 7137289 1404550..1404741 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1404741 7137289 AFE_1629 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426052.1 1404550 D 243159 CDS YP_002426053.1 218665941 7135022 1405113..1405412 1 NC_011761.1 identified by similarity to GB:CAD17227.1; match to protein family HMM TIGR02684; hypothetical protein 1405412 7135022 AFE_1631 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426053.1 1405113 D 243159 CDS YP_002426054.1 218666838 7134151 1405521..1405826 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1405826 7134151 AFE_1633 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426054.1 1405521 D 243159 CDS YP_002426055.1 218667452 7137087 complement(1405747..1406259) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1406259 7137087 AFE_1632 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426055.1 1405747 R 243159 CDS YP_002426056.1 218668066 7136743 1406427..1407395 1 NC_011761.1 identified by similarity to SP:P54907; match to protein family HMM PF00437; match to protein family HMM TIGR02782; P-type conjugative transfer protein TrbB 1407395 trbB 7136743 trbB Acidithiobacillus ferrooxidans ATCC 23270 P-type conjugative transfer protein TrbB YP_002426056.1 1406427 D 243159 CDS YP_002426057.1 218666794 7136801 complement(1407792..1408583) 1 NC_011761.1 hypothetical protein 1408583 7136801 AFE_1635 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426057.1 1407792 R 243159 CDS YP_002426058.1 218667853 7137043 1408788..1409174 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1409174 7137043 AFE_1636 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426058.1 1408788 D 243159 CDS YP_002426059.1 218665190 7134931 1409178..1409555 1 NC_011761.1 conjugal transfer protein TrbD 1409555 7134931 AFE_1637 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TrbD YP_002426059.1 1409178 D 243159 CDS YP_002426060.1 218666854 7135676 1409555..1412077 1 NC_011761.1 identified by similarity to SP:P05353; match to protein family HMM PF03135; conjugal transfer protein trbE 1412077 7135676 AFE_1638 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein trbE YP_002426060.1 1409555 D 243159 CDS YP_002426061.1 218666369 7137103 1412074..1412337 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1412337 7137103 AFE_1639 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426061.1 1412074 D 243159 CDS YP_002426062.1 218668165 7136509 1412420..1413160 1 NC_011761.1 identified by similarity to SP:P55400; match to protein family HMM TIGR02780; conjugal transfer protein trbJ 1413160 7136509 AFE_1640 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein trbJ YP_002426062.1 1412420 D 243159 CDS YP_002426063.1 218665958 7135984 1413172..1413426 1 NC_011761.1 lipoprotein 1413426 7135984 AFE_1641 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426063.1 1413172 D 243159 CDS YP_002426064.1 218667889 7134169 1413442..1415211 1 NC_011761.1 identified by similarity to GB:AAN33564.1; match to protein family HMM TIGR02783; conjugal transfer protein trbL 1415211 7134169 AFE_1642 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein trbL YP_002426064.1 1413442 D 243159 CDS YP_002426065.1 218667574 7135195 1415204..1415677 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1415677 7135195 AFE_1643 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426065.1 1415204 D 243159 CDS YP_002426066.1 218666507 7136441 complement(1415851..1416318) 1 NC_011761.1 identified by similarity to GB:AAN68922.1; hypothetical protein 1416318 7136441 AFE_1644 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426066.1 1415851 R 243159 CDS YP_002426067.1 218665940 7136319 complement(1416346..1416552) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1416552 7136319 AFE_1645 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426067.1 1416346 R 243159 CDS YP_002426068.1 218667609 7134150 complement(1416685..1418169) 1 NC_011761.1 identified by similarity to GB:AAK01318.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease, DO/DeqQ family 1418169 7134150 AFE_1646 Acidithiobacillus ferrooxidans ATCC 23270 serine protease, DO/DeqQ family YP_002426068.1 1416685 R 243159 CDS YP_002426069.1 218665242 7135783 complement(1418220..1418483) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1418483 7135783 AFE_1647 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426069.1 1418220 R 243159 CDS YP_002426070.1 218667995 7135731 complement(1418670..1419116) 1 NC_011761.1 identified by similarity to SP:Q06823; match to protein family HMM PF00011; heat shock protein, Hsp20 family 1419116 7135731 AFE_1648 Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein, Hsp20 family YP_002426070.1 1418670 R 243159 CDS YP_002426071.1 218667349 7134759 1419340..1419477 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1419477 7134759 AFE_1650 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426071.1 1419340 D 243159 CDS YP_002426072.1 218668041 7136871 complement(1419451..1420206) 1 NC_011761.1 identified by similarity to PIR:T51129; hypothetical protein 1420206 7136871 AFE_1649 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426072.1 1419451 R 243159 CDS YP_002426073.1 218666314 7134806 1420394..1421275 1 NC_011761.1 identified by similarity to SP:O34969; match to protein family HMM PF03446; match to protein family HMM PF03807; 3-hydroxyisobutyrate dehydrogenase 1421275 7134806 AFE_1651 Acidithiobacillus ferrooxidans ATCC 23270 3-hydroxyisobutyrate dehydrogenase YP_002426073.1 1420394 D 243159 CDS YP_002426074.1 218667659 7136453 1421305..1423572 1 NC_011761.1 identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01701; oxidoreductase molybdopterin subunit 1423572 7136453 AFE_1652 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase molybdopterin subunit YP_002426074.1 1421305 D 243159 CDS YP_002426075.1 218666973 7135442 1423562..1423831 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1423831 7135442 AFE_1653 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426075.1 1423562 D 243159 CDS YP_002426076.1 218665845 7134836 1423810..1424658 1 NC_011761.1 identified by match to protein family HMM PF02634; match to protein family HMM TIGR00129; formate dehydrogenase family accessory protein FdhD 1424658 fdhD-1 7134836 fdhD-1 Acidithiobacillus ferrooxidans ATCC 23270 formate dehydrogenase family accessory protein FdhD YP_002426076.1 1423810 D 243159 CDS YP_002426077.1 218665232 7135400 complement(1424667..1425359) 1 NC_011761.1 identified by similarity to GB:AAK61303.1; ISAfe6, transposase 1425359 7135400 AFE_1655 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe6, transposase YP_002426077.1 1424667 R 243159 CDS YP_002426078.1 218668140 7135720 complement(1425617..1426645) 1 NC_011761.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; ferredoxin/oxidoreductase, FAD/NAD-binding 1426645 7135720 AFE_1656 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin/oxidoreductase, FAD/NAD-binding YP_002426078.1 1425617 R 243159 CDS YP_002426079.1 218667249 7135959 complement(1426704..1428374) 1 NC_011761.1 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 1428374 7135959 AFE_1657 Acidithiobacillus ferrooxidans ATCC 23270 hydroxylamine reductase YP_002426079.1 1426704 R 243159 CDS YP_002426080.1 218667408 7135643 1428748..1429416 1 NC_011761.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; CarD family transcriptional regulator 1429416 7135643 AFE_1658 Acidithiobacillus ferrooxidans ATCC 23270 CarD family transcriptional regulator YP_002426080.1 1428748 D 243159 CDS YP_002426081.1 218666015 7136932 1429450..1429716 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1429716 7136932 AFE_1660 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426081.1 1429450 D 243159 CDS YP_002426082.1 218667521 7134231 complement(1429682..1430710) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1430710 7134231 AFE_1659 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426082.1 1429682 R 243159 CDS YP_002426083.1 218666630 7136386 complement(1430837..1433314) 1 NC_011761.1 identified by similarity to GB:AAM37026.1; hypothetical protein 1433314 7136386 AFE_1661 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426083.1 1430837 R 243159 CDS YP_002426084.1 218666453 7134501 complement(1433317..1434957) 1 NC_011761.1 identified by match to protein family HMM PF00361; NADH dehydrogenase 1434957 7134501 AFE_1662 Acidithiobacillus ferrooxidans ATCC 23270 NADH dehydrogenase YP_002426084.1 1433317 R 243159 CDS YP_002426085.1 218665622 7134399 complement(1435261..1436511) 1 NC_011761.1 identified by similarity to SP:P52074; match to protein family HMM PF00037; match to protein family HMM PF02754; glycolate oxidase, iron-sulfur subunit 1436511 glcF 7134399 glcF Acidithiobacillus ferrooxidans ATCC 23270 glycolate oxidase, iron-sulfur subunit YP_002426085.1 1435261 R 243159 CDS YP_002426086.1 218667278 7135565 complement(1436521..1437633) 1 NC_011761.1 identified by similarity to SP:P52073; match to protein family HMM PF01565; glycolate oxidase FAD binding subunit 1437633 glcE 7135565 glcE Acidithiobacillus ferrooxidans ATCC 23270 glycolate oxidase FAD binding subunit YP_002426086.1 1436521 R 243159 CDS YP_002426087.1 218665271 7135121 complement(1437587..1439053) 1 NC_011761.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02913; glycolate oxidase subunit GlcD 1439053 glcD 7135121 glcD Acidithiobacillus ferrooxidans ATCC 23270 glycolate oxidase subunit GlcD YP_002426087.1 1437587 R 243159 CDS YP_002426088.1 218665708 7136212 complement(1439068..1440405) 1 NC_011761.1 identified by similarity to PIR:AG2237; hypothetical protein 1440405 7136212 AFE_1666 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426088.1 1439068 R 243159 CDS YP_002426089.1 218666536 7137191 complement(1440418..1442586) 1 NC_011761.1 identified by match to protein family HMM PF02779; transketolase 1442586 7137191 AFE_1667 Acidithiobacillus ferrooxidans ATCC 23270 transketolase YP_002426089.1 1440418 R 243159 CDS YP_002426090.1 218667979 7136348 1442735..1443514 1 NC_011761.1 identified by match to protein family HMM PF01614; match to protein family HMM PF09339; IclR family transcriptional regulator 1443514 7136348 AFE_1668 Acidithiobacillus ferrooxidans ATCC 23270 IclR family transcriptional regulator YP_002426090.1 1442735 D 243159 CDS YP_002426091.1 218666887 7134743 1443814..1444083 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1444083 7134743 AFE_1669 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426091.1 1443814 D 243159 CDS YP_002426092.1 218666219 7134597 1444150..1445028 1 NC_011761.1 identified by similarity to PIR:AG2067; hypothetical protein 1445028 7134597 AFE_1670 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426092.1 1444150 D 243159 CDS YP_002426093.1 218665560 7136575 1445085..1445645 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1445645 7136575 AFE_1671 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426093.1 1445085 D 243159 CDS YP_002426094.1 218666905 7135932 1445713..1446750 1 NC_011761.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 1446750 7135932 AFE_1672 Acidithiobacillus ferrooxidans ATCC 23270 dihydroorotase YP_002426094.1 1445713 D 243159 CDS YP_002426095.1 218666802 7134615 1446832..1448505 1 NC_011761.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 1448505 ilvD-1 7134615 ilvD-1 Acidithiobacillus ferrooxidans ATCC 23270 dihydroxy-acid dehydratase YP_002426095.1 1446832 D 243159 CDS YP_002426096.1 218667682 7137051 complement(1448509..1449495) 1 NC_011761.1 identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC family protein 1449495 7137051 AFE_1674 Acidithiobacillus ferrooxidans ATCC 23270 Sua5/YciO/YrdC family protein YP_002426096.1 1448509 R 243159 CDS YP_002426097.1 218666598 7135465 complement(1449690..1450445) 1 NC_011761.1 identified by match to protein family HMM TIGR00347; dethiobiotin synthetase 1450445 bioD-1 7135465 bioD-1 Acidithiobacillus ferrooxidans ATCC 23270 dethiobiotin synthetase YP_002426097.1 1449690 R 243159 CDS YP_002426098.1 218667491 7135328 complement(1450475..1451656) 1 NC_011761.1 identified by match to protein family HMM PF01116; fructose-bisphosphate aldolase class II family protein 1451656 7135328 AFE_1676 Acidithiobacillus ferrooxidans ATCC 23270 fructose-bisphosphate aldolase class II family protein YP_002426098.1 1450475 R 243159 CDS YP_002426099.1 218668018 7136785 complement(1451782..1454133) 1 NC_011761.1 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 1454133 7136785 AFE_1677 Acidithiobacillus ferrooxidans ATCC 23270 von Willebrand factor type A domain-containing protein YP_002426099.1 1451782 R 243159 CDS YP_002426100.1 218667261 7134783 complement(1454149..1454952) 1 NC_011761.1 identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406; p30 protein 1454952 p30 7134783 p30 Acidithiobacillus ferrooxidans ATCC 23270 p30 protein YP_002426100.1 1454149 R 243159 CDS YP_002426101.1 218665865 7135655 complement(1454983..1455237) 1 NC_011761.1 identified by similarity to GB:CAB45259.1; hypothetical protein 1455237 7135655 AFE_1679 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426101.1 1454983 R 243159 CDS YP_002426102.1 218667777 7135420 complement(1455228..1455863) 1 NC_011761.1 identified by similarity to GB:AAB36936.1; match to protein family HMM PF01656; hypothetical protein 1455863 7135420 AFE_1680 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426102.1 1455228 R 243159 CDS YP_002426103.1 218665124 7134452 complement(1455900..1456178) 1 NC_011761.1 identified by similarity to GB:CAE21373.1; hypothetical protein 1456178 7134452 AFE_1681 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426103.1 1455900 R 243159 CDS YP_002426104.1 218666297 7134275 complement(1456175..1456618) 1 NC_011761.1 identified by match to protein family HMM PF00210; bacterioferritin 1456618 bfr 7134275 bfr Acidithiobacillus ferrooxidans ATCC 23270 bacterioferritin YP_002426104.1 1456175 R 243159 CDS YP_002426105.1 218666785 7137305 complement(1456632..1456970) 1 NC_011761.1 identified by similarity to GB:AAD30516.1; match to protein family HMM PF00936; carboxysome shell peptide 1456970 cscE 7137305 cscE Acidithiobacillus ferrooxidans ATCC 23270 carboxysome shell peptide YP_002426105.1 1456632 R 243159 CDS YP_002426106.1 218666355 7137282 complement(1457016..1457318) 1 NC_011761.1 identified by similarity to GB:AAD30515.1; match to protein family HMM PF00936; carboxysome shell peptide 1457318 cscD 7137282 cscD Acidithiobacillus ferrooxidans ATCC 23270 carboxysome shell peptide YP_002426106.1 1457016 R 243159 CDS YP_002426107.1 218665923 7136494 complement(1457357..1457653) 1 NC_011761.1 identified by similarity to GB:AAD30514.1; match to protein family HMM PF00936; carboxysome shell peptide 1457653 cscC 7136494 cscC Acidithiobacillus ferrooxidans ATCC 23270 carboxysome shell peptide YP_002426107.1 1457357 R 243159 CDS YP_002426108.1 218666637 7134133 complement(1457685..1457951) 1 NC_011761.1 identified by similarity to GB:AAD30513.1; match to protein family HMM PF03319; match to protein family HMM TIGR02704; carboxysome peptide B 1457951 cscB 7134133 cscB Acidithiobacillus ferrooxidans ATCC 23270 carboxysome peptide B YP_002426108.1 1457685 R 243159 CDS YP_002426109.1 218667553 7134508 complement(1457962..1458210) 1 NC_011761.1 identified by similarity to GB:AAD30512.1; match to protein family HMM PF03319; match to protein family HMM TIGR02703; carboxysome peptide A 1458210 cscA 7134508 cscA Acidithiobacillus ferrooxidans ATCC 23270 carboxysome peptide A YP_002426109.1 1457962 R 243159 CDS YP_002426110.1 218668126 7136419 complement(1458207..1459808) 1 NC_011761.1 identified by similarity to GB:AAD30511.1; match to protein family HMM PF08936; match to protein family HMM TIGR02701; carboxysome shell carbonic anhydrase 1459808 cab2 7136419 cab2 Acidithiobacillus ferrooxidans ATCC 23270 carboxysome shell carbonic anhydrase YP_002426110.1 1458207 R 243159 CDS YP_002426111.1 218665890 7136863 complement(1459864..1462152) 1 NC_011761.1 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 1462152 7136863 AFE_1689 Acidithiobacillus ferrooxidans ATCC 23270 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_002426111.1 1459864 R 243159 CDS YP_002426112.1 218665037 7134100 complement(1462235..1462567) 1 NC_011761.1 identified by match to protein family HMM PF00101; ribulose bisphosphate carboxylase, small subunit 1462567 cbbS-2 7134100 cbbS-2 Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisphosphate carboxylase, small subunit YP_002426112.1 1462235 R 243159 CDS YP_002426113.1 218666828 7134966 complement(1462659..1464080) 1 NC_011761.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 1464080 rbcL 7134966 rbcL Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisophosphate carboxylase YP_002426113.1 1462659 R 243159 CDS YP_002426114.1 218665925 7137077 1464153..1465151 1 NC_011761.1 identified by similarity to SP:Q06610; match to protein family HMM PF00126; match to protein family HMM PF03466; rubisco operon transcriptional regulator 1465151 cbbR 7137077 cbbR Acidithiobacillus ferrooxidans ATCC 23270 rubisco operon transcriptional regulator YP_002426114.1 1464153 D 243159 CDS YP_002426115.1 218666360 7134135 1465595..1466452 1 NC_011761.1 identified by similarity to GB:CAB88947.1; hypothetical protein 1466452 7134135 AFE_1693 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426115.1 1465595 D 243159 CDS YP_002426116.1 218665075 7136500 1466762..1467430 1 NC_011761.1 identified by similarity to SP:P54914; conjugal transfer protein 1467430 7136500 AFE_1694 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein YP_002426116.1 1466762 D 243159 CDS YP_002426117.1 218666648 7135004 1467443..1468588 1 NC_011761.1 identified by similarity to SP:P54915; match to protein family HMM PF03524; conjugal transfer protein 1468588 7135004 AFE_1695 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein YP_002426117.1 1467443 D 243159 CDS YP_002426118.1 218667724 7134519 1468590..1469591 1 NC_011761.1 conjugal transfer protein 1469591 7134519 AFE_1696 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein YP_002426118.1 1468590 D 243159 CDS YP_002426119.1 218667588 7136451 1471391..1472062 1 NC_011761.1 identified by match to protein family HMM PF01464; conjugal transfer -like protein 1472062 7136451 AFE_1698 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer -like protein YP_002426119.1 1471391 D 243159 CDS YP_002426120.1 218665095 7135759 1472073..1474577 1 NC_011761.1 identified by match to protein family HMM PF02534; TraG/TraD family protein 1474577 7135759 AFE_1699 Acidithiobacillus ferrooxidans ATCC 23270 TraG/TraD family protein YP_002426120.1 1472073 D 243159 CDS YP_002426121.1 218667519 7135026 1474687..1474881 1 NC_011761.1 identified by similarity to PIR:E85625; hypothetical protein 1474881 7135026 AFE_1700 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426121.1 1474687 D 243159 CDS YP_002426122.1 218666747 7135577 complement(1475207..1475395) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1475395 7135577 AFE_1702 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426122.1 1475207 R 243159 CDS YP_002426123.1 218666052 7137242 complement(1475398..1475625) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1475625 7137242 AFE_1703 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426123.1 1475398 R 243159 CDS YP_002426124.1 218665339 7136972 complement(1475603..1475839) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1475839 7136972 AFE_1704 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426124.1 1475603 R 243159 CDS YP_002426125.1 218666563 7136120 1475927..1476058 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1476058 7136120 AFE_1705 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426125.1 1475927 D 243159 CDS YP_002426126.1 218665621 7135293 1476740..1479913 1 NC_011761.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1479913 7135293 AFE_1707 Acidithiobacillus ferrooxidans ATCC 23270 sensory box-containing diguanylate cyclase YP_002426126.1 1476740 D 243159 CDS YP_002426127.1 218667507 7135564 complement(1479769..1481406) 1 NC_011761.1 identified by match to protein family HMM PF03050; ISAfe4, transposase orf3 1481406 7135564 AFE_1706 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf3 YP_002426127.1 1479769 R 243159 CDS YP_002426128.1 218666594 7136372 complement(1481456..1481803) 1 NC_011761.1 identified by match to protein family HMM PF05717; ISAfe4, transposase orf2 1481803 7136372 AFE_1708 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf2 YP_002426128.1 1481456 R 243159 CDS YP_002426129.1 218667541 7135324 complement(1481794..1482126) 1 NC_011761.1 Assignment based on BLAST search at the ISFinder database, and proximity to other transposase ORFs.; ISAfe4, transposase orf1 1482126 7135324 AFE_1709 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf1 YP_002426129.1 1481794 R 243159 CDS YP_002426130.1 218666258 7136407 1482240..1482662 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1482662 7136407 AFE_1710 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426130.1 1482240 D 243159 CDS YP_002426131.1 218667991 7136615 complement(1482799..1483356) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1483356 7136615 AFE_1711 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426131.1 1482799 R 243159 CDS YP_002426132.1 218665522 7134755 complement(1483680..1485677) 1 NC_011761.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM TIGR00254; diguanylate cyclase 1485677 7134755 AFE_1712 Acidithiobacillus ferrooxidans ATCC 23270 diguanylate cyclase YP_002426132.1 1483680 R 243159 CDS YP_002426133.1 218666866 7135893 complement(1486371..1486499) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1486499 7135893 AFE_1713 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426133.1 1486371 R 243159 CDS YP_002426134.1 218667718 7137115 complement(1486744..1486932) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1486932 7137115 AFE_1714 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426134.1 1486744 R 243159 CDS YP_002426135.1 218665036 7135501 1486885..1487013 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1487013 7135501 AFE_1715 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426135.1 1486885 D 243159 CDS YP_002426136.1 218665499 7134965 complement(1487170..1488069) 1 NC_011761.1 GTP-binding protein 1488069 7134965 AFE_1716 Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein YP_002426136.1 1487170 R 243159 CDS YP_002426137.1 218665430 7135029 1488207..1488497 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1488497 7135029 AFE_1718 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426137.1 1488207 D 243159 CDS YP_002426138.1 218668074 7135042 complement(1488397..1488654) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1488654 7135042 AFE_1717 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426138.1 1488397 R 243159 CDS YP_002426139.1 218665184 7136810 complement(1488738..1489991) 1 NC_011761.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; parB family protein 1489991 7136810 AFE_1719 Acidithiobacillus ferrooxidans ATCC 23270 parB family protein YP_002426139.1 1488738 R 243159 CDS YP_002426140.1 218666862 7135670 complement(1489993..1490763) 1 NC_011761.1 identified by match to protein family HMM PF01656; parA family protein 1490763 7135670 AFE_1720 Acidithiobacillus ferrooxidans ATCC 23270 parA family protein YP_002426140.1 1489993 R 243159 CDS YP_002426141.1 218667565 7137111 complement(1490742..1491182) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1491182 7137111 AFE_1721 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426141.1 1490742 R 243159 CDS YP_002426142.1 218666893 7136431 1491312..1491680 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1491680 7136431 AFE_1722 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426142.1 1491312 D 243159 CDS YP_002426143.1 218667607 7134603 complement(1491691..1492689) 1 NC_011761.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 1492689 7134603 AFE_1723 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, aldo/keto reductase family YP_002426143.1 1491691 R 243159 CDS YP_002426144.1 218665698 7135781 1492849..1492941 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1492941 7135781 AFE_1724 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426144.1 1492849 D 243159 CDS YP_002426145.1 218666510 7137181 1493950..1496079 1 NC_011761.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 1496079 7137181 AFE_1725 Acidithiobacillus ferrooxidans ATCC 23270 sensory box-containing diguanylate cyclase YP_002426145.1 1493950 D 243159 CDS YP_002426146.1 218666182 7136322 complement(1496206..1496751) 1 NC_011761.1 identified by similarity to SP:Q44350; conjugal transfer protein TraF 1496751 7136322 AFE_1726 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraF YP_002426146.1 1496206 R 243159 CDS YP_002426147.1 218666639 7134083 1496723..1497163 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1497163 7134083 AFE_1727 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426147.1 1496723 D 243159 CDS YP_002426148.1 218665294 7134510 1497144..1497485 1 NC_011761.1 identified by similarity to GB:CAC46678.1; hypothetical protein 1497485 7134510 AFE_1728 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426148.1 1497144 D 243159 CDS YP_002426149.1 218665877 7136235 complement(1497493..1497624) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1497624 7136235 AFE_1729 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426149.1 1497493 R 243159 CDS YP_002426150.1 218667363 7135432 complement(1497668..1497931) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1497931 7135432 AFE_1730 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426150.1 1497668 R 243159 CDS YP_002426151.1 218667893 7136885 complement(1498010..1499350) 1 NC_011761.1 identified by similarity to SP:Q44351; conjugal transfer protein TraB 1499350 7136885 AFE_1731 Acidithiobacillus ferrooxidans ATCC 23270 conjugal transfer protein TraB YP_002426151.1 1498010 R 243159 CDS YP_002426152.1 218667149 7135200 1499609..1499839 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1499839 7135200 AFE_1732 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426152.1 1499609 D 243159 CDS YP_002426153.1 218666062 7134696 1499851..1500294 1 NC_011761.1 identified by similarity to PIR:E85734; match to protein family HMM PF03681; hypothetical protein 1500294 7134696 AFE_1733 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426153.1 1499851 D 243159 CDS YP_002426154.1 218667430 7136982 1500400..1500696 1 NC_011761.1 identified by similarity to PIR:G82661; match to protein family HMM TIGR02684; hypothetical protein 1500696 7136982 AFE_1734 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426154.1 1500400 D 243159 CDS YP_002426155.1 218667428 7136719 complement(1500938..1501168) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1501168 7136719 AFE_1735 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426155.1 1500938 R 243159 CDS YP_002426156.1 218666456 7136952 complement(1501146..1501406) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1501406 7136952 AFE_1736 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426156.1 1501146 R 243159 CDS YP_002426157.1 218667337 7134402 complement(1501387..1501536) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1501536 7134402 AFE_1737 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426157.1 1501387 R 243159 CDS YP_002426158.1 218667833 7135182 complement(1501586..1503685) 1 NC_011761.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01056; DNA topoisomerase III 1503685 topB 7135182 topB Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase III YP_002426158.1 1501586 R 243159 CDS YP_002426159.1 218665548 7134911 complement(1503724..1503915) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1503915 7134911 AFE_1739 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426159.1 1503724 R 243159 CDS YP_002426160.1 218667558 7135920 complement(1504835..1506211) 1 NC_011761.1 identified by match to protein family HMM PF00614; phospholipase D 1506211 7135920 AFE_1740 Acidithiobacillus ferrooxidans ATCC 23270 phospholipase D YP_002426160.1 1504835 R 243159 CDS YP_002426161.1 218665503 7136424 complement(1506248..1508077) 1 NC_011761.1 identified by match to protein family HMM PF00158; match to protein family HMM PF01590; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator 1508077 7136424 AFE_1741 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator YP_002426161.1 1506248 R 243159 CDS YP_002426162.1 218666514 7135874 1508468..1509988 1 NC_011761.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 1509988 7135874 AFE_1742 Acidithiobacillus ferrooxidans ATCC 23270 aldehyde dehydrogenase (NAD) family protein YP_002426162.1 1508468 D 243159 CDS YP_002426163.1 218666841 7136326 1510065..1510436 1 NC_011761.1 identified by similarity to PIR:H83734; hypothetical protein 1510436 7136326 AFE_1743 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426163.1 1510065 D 243159 CDS YP_002426164.1 218666597 7137090 complement(1510884..1510976) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1510976 7137090 AFE_1744 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426164.1 1510884 R 243159 CDS YP_002426165.1 218666141 7135327 complement(1511065..1511598) 1 NC_011761.1 identified by similarity to GB:CAE32968.1; hypothetical protein 1511598 7135327 AFE_1745 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426165.1 1511065 R 243159 CDS YP_002426166.1 218667956 7134041 complement(1511742..1511879) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1511879 7134041 AFE_1746 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426166.1 1511742 R 243159 CDS YP_002426167.1 218665360 7136438 1512347..1512931 1 NC_011761.1 identified by similarity to PIR:AC2205; match to protein family HMM PF02586; hypothetical protein 1512931 7136438 AFE_1749 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426167.1 1512347 D 243159 CDS YP_002426168.1 218666217 7136142 complement(1512696..1513283) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1513283 7136142 AFE_1748 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426168.1 1512696 R 243159 CDS YP_002426169.1 218667986 7136573 1513246..1513740 1 NC_011761.1 identified by similarity to SP:P04153; match to protein family HMM PF00717; umuD protein 1513740 umuD 7136573 umuD Acidithiobacillus ferrooxidans ATCC 23270 umuD protein YP_002426169.1 1513246 D 243159 CDS YP_002426170.1 218665203 7134750 1513748..1515031 1 NC_011761.1 identified by match to protein family HMM PF00817; umuC protein 1515031 7134750 AFE_1751 Acidithiobacillus ferrooxidans ATCC 23270 umuC protein YP_002426170.1 1513748 D 243159 CDS YP_002426171.1 218668028 7135691 1515103..1516281 1 NC_011761.1 identified by similarity to GB:AAO54594.1; hypothetical protein 1516281 7135691 AFE_1752 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426171.1 1515103 D 243159 CDS YP_002426172.1 218665841 7134793 1516487..1518421 1 NC_011761.1 identified by match to protein family HMM PF02705; potassium uptake protein 1518421 kup 7134793 kup Acidithiobacillus ferrooxidans ATCC 23270 potassium uptake protein YP_002426172.1 1516487 D 243159 CDS YP_002426173.1 218667750 7135396 1518552..1518866 1 NC_011761.1 identified by similarity to SP:Q46560; match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein 1518866 7135396 AFE_1754 Acidithiobacillus ferrooxidans ATCC 23270 virulence-associated protein YP_002426173.1 1518552 D 243159 CDS YP_002426174.1 218665606 7134424 1520072..1520764 1 NC_011761.1 identified by similarity to GB:AAN66820.1; hypothetical protein 1520764 7134424 AFE_1755 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426174.1 1520072 D 243159 CDS YP_002426175.1 218665104 7135549 complement(1520790..1520975) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1520975 7135549 AFE_1756 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426175.1 1520790 R 243159 CDS YP_002426176.1 218666289 7134255 complement(1521058..1521363) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1521363 7134255 AFE_1757 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426176.1 1521058 R 243159 CDS YP_002426177.1 218665887 7137297 1521773..1522300 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1522300 7137297 AFE_1758 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426177.1 1521773 D 243159 CDS YP_002426178.1 218665062 7134097 complement(1522505..1522636) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1522636 7134097 AFE_1759 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426178.1 1522505 R 243159 CDS YP_002426179.1 218667666 7134991 complement(1522800..1525412) 1 NC_011761.1 identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS 1525412 mutS 7134991 mutS Acidithiobacillus ferrooxidans ATCC 23270 DNA mismatch repair protein MutS YP_002426179.1 1522800 R 243159 CDS YP_002426180.1 218667847 7135449 complement(1525437..1525673) 1 NC_011761.1 identified by similarity to GB:AAQ60975.1; hypothetical protein 1525673 7135449 AFE_1761 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426180.1 1525437 R 243159 CDS YP_002426181.1 218666822 7134925 1525721..1525981 1 NC_011761.1 identified by similarity to SP:Q9F2U7; hypothetical protein 1525981 7134925 AFE_1762 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426181.1 1525721 D 243159 CDS YP_002426182.1 218665438 7137071 1526033..1527241 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 1527241 7137071 AFE_1763 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002426182.1 1526033 D 243159 CDS YP_002426183.1 218667191 7135050 complement(1527473..1528165) 1 NC_011761.1 identified by match to protein family HMM PF01027; hypothetical protein 1528165 7135050 AFE_1764 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426183.1 1527473 R 243159 CDS YP_002426184.1 218666242 7135584 1528273..1528413 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1528413 7135584 AFE_1765 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426184.1 1528273 D 243159 CDS YP_002426185.1 218666066 7136599 1528394..1529056 1 NC_011761.1 identified by similarity to SP:P76281; match to protein family HMM PF00929; exodeoxyribonuclease X 1529056 7136599 AFE_1767 Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease X YP_002426185.1 1528394 D 243159 CDS YP_002426186.1 218666324 7136986 complement(1529029..1529655) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1529655 7136986 AFE_1766 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426186.1 1529029 R 243159 CDS YP_002426187.1 218666593 7136463 1529724..1530083 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1530083 7136463 AFE_1768 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426187.1 1529724 D 243159 CDS YP_002426188.1 218667258 7135323 complement(1530100..1533933) 1 NC_011761.1 identified by similarity to GB:AAQ61895.1; match to protein family HMM PF01565; match to protein family HMM PF02754; match to protein family HMM PF02913; oxidoreductase, FAD-binding 1533933 7135323 AFE_1769 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, FAD-binding YP_002426188.1 1530100 R 243159 CDS YP_002426189.1 218665879 7135652 complement(1533933..1534769) 1 NC_011761.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1534769 panC 7135652 panC Acidithiobacillus ferrooxidans ATCC 23270 pantoate--beta-alanine ligase YP_002426189.1 1533933 R 243159 CDS YP_002426190.1 218668065 7135434 complement(1534771..1535556) 1 NC_011761.1 identified by similarity to SP:P31057; match to protein family HMM PF02548; match to protein family HMM TIGR00222; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1535556 panB 7135434 panB Acidithiobacillus ferrooxidans ATCC 23270 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002426190.1 1534771 R 243159 CDS YP_002426191.1 218666294 7136800 complement(1535549..1536160) 1 NC_011761.1 identified by similarity to SP:Q59483; similarity to SP:Q59484; deoxyguanosine kinase/deoxyadenosine kinase 1536160 7136800 AFE_1772 Acidithiobacillus ferrooxidans ATCC 23270 deoxyguanosine kinase/deoxyadenosine kinase YP_002426191.1 1535549 R 243159 CDS YP_002426192.1 218665962 7135123 complement(1536682..1538034) 1 NC_011761.1 identified by match to protein family HMM PF01743; polyA polymerase family protein 1538034 7135123 AFE_1774 Acidithiobacillus ferrooxidans ATCC 23270 polyA polymerase family protein YP_002426192.1 1536682 R 243159 CDS YP_002426193.1 218667450 7134173 complement(1538056..1539489) 1 NC_011761.1 identified by match to protein family HMM PF01743; match to protein family HMM TIGR01942; polyA polymerase 1539489 pcnB 7134173 pcnB Acidithiobacillus ferrooxidans ATCC 23270 polyA polymerase YP_002426193.1 1538056 R 243159 CDS YP_002426194.1 218665694 7136741 complement(1539684..1540646) 1 NC_011761.1 identified by similarity to SP:O22007; match to protein family HMM PF00535; glycosyl transferase family protein 1540646 7136741 AFE_1776 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002426194.1 1539684 R 243159 CDS YP_002426195.1 218665500 7137177 1540827..1542287 1 NC_011761.1 identified by similarity to SP:P06981; match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 1542287 guaB 7137177 guaB Acidithiobacillus ferrooxidans ATCC 23270 inosine-5'-monophosphate dehydrogenase YP_002426195.1 1540827 D 243159 CDS YP_002426196.1 218666576 7135871 1542291..1543835 1 NC_011761.1 identified by similarity to SP:P49057; match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase 1543835 guaA 7135871 guaA Acidithiobacillus ferrooxidans ATCC 23270 GMP synthase YP_002426196.1 1542291 D 243159 CDS YP_002426197.1 218665129 7135306 1544009..1544263 1 NC_011761.1 identified by similarity to SP:P55510; plasmid stability protein 1544263 7135306 AFE_1779 Acidithiobacillus ferrooxidans ATCC 23270 plasmid stability protein YP_002426197.1 1544009 D 243159 CDS YP_002426198.1 218665399 7134280 1544264..1544683 1 NC_011761.1 identified by match to protein family HMM PF01850; plasmid stability protein 1544683 7134280 AFE_1780 Acidithiobacillus ferrooxidans ATCC 23270 plasmid stability protein YP_002426198.1 1544264 D 243159 CDS YP_002426199.1 218666719 7136181 1544701..1544913 1 NC_011761.1 identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439; AbrB family transcriptional regulator 1544913 7136181 AFE_1781 Acidithiobacillus ferrooxidans ATCC 23270 AbrB family transcriptional regulator YP_002426199.1 1544701 D 243159 CDS YP_002426200.1 218666027 7137214 1545748..1547367 1 NC_011761.1 identified by match to protein family HMM PF00324; amino acid permease family protein 1547367 7137214 AFE_1782 Acidithiobacillus ferrooxidans ATCC 23270 amino acid permease family protein YP_002426200.1 1545748 D 243159 CDS YP_002426201.1 218667362 7134243 1547506..1548657 1 NC_011761.1 identified by similarity to SP:P07005; match to protein family HMM PF00696; match to protein family HMM PF01472; match to protein family HMM TIGR01027; glutamate 5-kinase 1548657 proB-2 7134243 proB-2 Acidithiobacillus ferrooxidans ATCC 23270 glutamate 5-kinase YP_002426201.1 1547506 D 243159 CDS YP_002426202.1 218667926 7136884 complement(1548733..1551408) 1 NC_011761.1 identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 1551408 7136884 AFE_1784 Acidithiobacillus ferrooxidans ATCC 23270 mechanosensitive ion channel family protein YP_002426202.1 1548733 R 243159 CDS YP_002426203.1 218667179 7135233 1551423..1551740 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1551740 7135233 AFE_1785 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426203.1 1551423 D 243159 CDS YP_002426204.1 218668079 7134728 complement(1551767..1552591) 1 NC_011761.1 identified by similarity to GB:CAD16844.1; hypothetical protein 1552591 7134728 AFE_1786 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426204.1 1551767 R 243159 CDS YP_002426205.1 218665262 7136815 1552730..1553365 1 NC_011761.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 1553365 7136815 AFE_1787 Acidithiobacillus ferrooxidans ATCC 23270 Sua5/YciO/YrdC/YwlC family protein YP_002426205.1 1552730 D 243159 CDS YP_002426206.1 218665892 7136203 1553416..1554075 1 NC_011761.1 identified by similarity to GB:CAD85637.1; match to protein family HMM PF02163; membrane-associated zinc metalloprotease 1554075 7136203 AFE_1788 Acidithiobacillus ferrooxidans ATCC 23270 membrane-associated zinc metalloprotease YP_002426206.1 1553416 D 243159 CDS YP_002426207.1 218666020 7134102 1554075..1555286 1 NC_011761.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1555286 trpS 7134102 trpS Acidithiobacillus ferrooxidans ATCC 23270 tryptophanyl-tRNA synthetase YP_002426207.1 1554075 D 243159 CDS YP_002426208.1 218666895 7134236 1555267..1556088 1 NC_011761.1 identified by similarity to GB:AAM37169.1; match to protein family HMM PF02616; segregation and condensation protein A 1556088 scpA 7134236 scpA Acidithiobacillus ferrooxidans ATCC 23270 segregation and condensation protein A YP_002426208.1 1555267 D 243159 CDS YP_002426209.1 218665952 7134605 1556088..1556621 1 NC_011761.1 identified by similarity to PIR:F81941; match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 1556621 scpB 7134605 scpB Acidithiobacillus ferrooxidans ATCC 23270 segregation and condensation protein B YP_002426209.1 1556088 D 243159 CDS YP_002426210.1 218667560 7134162 1556784..1558088 1 NC_011761.1 identified by similarity to GB:AAF72963.1; match to protein family HMM PF00070; match to protein family HMM PF07992; sulfide-quinone reductase 1558088 7134162 AFE_1792 Acidithiobacillus ferrooxidans ATCC 23270 sulfide-quinone reductase YP_002426210.1 1556784 D 243159 CDS YP_002426211.1 218666928 7136426 1558212..1559090 1 NC_011761.1 identified by similarity to SP:P37765; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B 1559090 rluB 7136426 rluB Acidithiobacillus ferrooxidans ATCC 23270 ribosomal large subunit pseudouridine synthase B YP_002426211.1 1558212 D 243159 CDS YP_002426212.1 218665212 7134638 1559100..1559771 1 NC_011761.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; base excision repair protein, HhH-GPD family 1559771 7134638 AFE_1794 Acidithiobacillus ferrooxidans ATCC 23270 base excision repair protein, HhH-GPD family YP_002426212.1 1559100 D 243159 CDS YP_002426213.1 218665863 7135700 1559740..1560156 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1560156 7135700 AFE_1796 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426213.1 1559740 D 243159 CDS YP_002426214.1 218666849 7135418 complement(1560075..1560347) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1560347 7135418 AFE_1795 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426214.1 1560075 R 243159 CDS YP_002426215.1 218667944 7137098 complement(1560355..1561866) 1 NC_011761.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 1561866 7137098 AFE_1797 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002426215.1 1560355 R 243159 CDS YP_002426216.1 218666153 7135251 complement(1561890..1562447) 1 NC_011761.1 hypothetical protein 1562447 7135251 AFE_1798 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426216.1 1561890 R 243159 CDS YP_002426217.1 218667484 7134053 complement(1562460..1564985) 1 NC_011761.1 identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094; alpha-glucan phosphorylase family protein 1564985 7134053 AFE_1799 Acidithiobacillus ferrooxidans ATCC 23270 alpha-glucan phosphorylase family protein YP_002426217.1 1562460 R 243159 CDS YP_002426218.1 218666911 7136776 complement(1565042..1565392) 1 NC_011761.1 identified by similarity to SP:P08734; enolase domain-containing protein 1565392 7136776 AFE_1800 Acidithiobacillus ferrooxidans ATCC 23270 enolase domain-containing protein YP_002426218.1 1565042 R 243159 CDS YP_002426219.1 218667819 7134621 complement(1565404..1566828) 1 NC_011761.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 1566828 pyk 7134621 pyk Acidithiobacillus ferrooxidans ATCC 23270 pyruvate kinase YP_002426219.1 1565404 R 243159 CDS YP_002426220.1 218665230 7134494 complement(1566828..1567748) 1 NC_011761.1 identified by similarity to SP:P58315; match to protein family HMM PF01791; aldolase 1567748 7134494 AFE_1802 Acidithiobacillus ferrooxidans ATCC 23270 aldolase YP_002426220.1 1566828 R 243159 CDS YP_002426221.1 218667269 7135718 complement(1567741..1569138) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1569138 7135718 AFE_1803 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002426221.1 1567741 R 243159 CDS YP_002426222.1 218665581 7135112 complement(1569192..1569356) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1569356 7135112 AFE_1804 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426222.1 1569192 R 243159 CDS YP_002426223.1 218666674 7135523 complement(1569338..1569538) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1569538 7135523 AFE_1805 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426223.1 1569338 R 243159 CDS YP_002426224.1 218666305 7134545 1569699..1570100 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1570100 7134545 AFE_1806 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426224.1 1569699 D 243159 CDS YP_002426225.1 218666109 7137313 complement(1570226..1571185) 1 NC_011761.1 identified by match to protein family HMM PF00294; match to protein family HMM TIGR03168; carbohydrate kinase, PfkB family 1571185 7137313 AFE_1807 Acidithiobacillus ferrooxidans ATCC 23270 carbohydrate kinase, PfkB family YP_002426225.1 1570226 R 243159 CDS YP_002426226.1 218666979 7137030 complement(1571182..1572105) 1 NC_011761.1 identified by match to protein family HMM PF01515; phosphate acetyl/butyryl transferase 1572105 7137030 AFE_1808 Acidithiobacillus ferrooxidans ATCC 23270 phosphate acetyl/butyryl transferase YP_002426226.1 1571182 R 243159 CDS YP_002426227.1 218667872 7134842 complement(1572130..1573629) 1 NC_011761.1 identified by similarity to SP:Q46909; match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family protein 1573629 7134842 AFE_1809 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family protein YP_002426227.1 1572130 R 243159 CDS YP_002426228.1 218665346 7136531 complement(1573626..1574810) 1 NC_011761.1 identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 1574810 ackA 7136531 ackA Acidithiobacillus ferrooxidans ATCC 23270 acetate kinase YP_002426228.1 1573626 R 243159 CDS YP_002426229.1 218666017 7136127 complement(1574813..1576081) 1 NC_011761.1 identified by match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; 2-oxo acid dehydrogenase, acyltransferase 1576081 7136127 AFE_1811 Acidithiobacillus ferrooxidans ATCC 23270 2-oxo acid dehydrogenase, acyltransferase YP_002426229.1 1574813 R 243159 CDS YP_002426230.1 218666711 7134233 complement(1576078..1577070) 1 NC_011761.1 identified by similarity to SP:P51266; match to protein family HMM PF02779; match to protein family HMM PF02780; dehydrogenase complex, E1 component subunit beta 1577070 7134233 AFE_1812 Acidithiobacillus ferrooxidans ATCC 23270 dehydrogenase complex, E1 component subunit beta YP_002426230.1 1576078 R 243159 CDS YP_002426231.1 218666766 7137206 complement(1577067..1578131) 1 NC_011761.1 identified by match to protein family HMM PF00676; dehydrogenase complex, E1 component subunit alpha 1578131 7137206 AFE_1813 Acidithiobacillus ferrooxidans ATCC 23270 dehydrogenase complex, E1 component subunit alpha YP_002426231.1 1577067 R 243159 CDS YP_002426232.1 218667246 7137262 complement(1578124..1578474) 1 NC_011761.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; alkylhydroperoxidase AhpD domain-containing protein 1578474 7137262 AFE_1814 Acidithiobacillus ferrooxidans ATCC 23270 alkylhydroperoxidase AhpD domain-containing protein YP_002426232.1 1578124 R 243159 CDS YP_002426233.1 218665060 7135640 complement(1578510..1580033) 1 NC_011761.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1580033 gpmI-1 7135640 gpmI-1 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglyceromutase YP_002426233.1 1578510 R 243159 CDS YP_002426234.1 218665074 7134989 complement(1580030..1582441) 1 NC_011761.1 identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01418; phosphoenolpyruvate synthase 1582441 ppsA 7134989 ppsA Acidithiobacillus ferrooxidans ATCC 23270 phosphoenolpyruvate synthase YP_002426234.1 1580030 R 243159 CDS YP_002426235.1 218666915 7135003 complement(1582536..1583498) 1 NC_011761.1 identified by match to protein family HMM PF00685; sulfotransferase domain-containing protein 1583498 7135003 AFE_1817 Acidithiobacillus ferrooxidans ATCC 23270 sulfotransferase domain-containing protein YP_002426235.1 1582536 R 243159 CDS YP_002426236.1 218667599 7134625 complement(1583510..1584334) 1 NC_011761.1 identified by match to protein family HMM PF03330; match to protein family HMM PF05036; match to protein family HMM TIGR00413; rare lipoprotein A 1584334 7134625 AFE_1818 Acidithiobacillus ferrooxidans ATCC 23270 rare lipoprotein A YP_002426236.1 1583510 R 243159 CDS YP_002426237.1 218667059 7135772 complement(1584324..1585472) 1 NC_011761.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1585472 dapE 7135772 dapE Acidithiobacillus ferrooxidans ATCC 23270 succinyl-diaminopimelate desuccinylase YP_002426237.1 1584324 R 243159 CDS YP_002426238.1 218665220 7136659 complement(1585484..1586308) 1 NC_011761.1 identified by similarity to SP:P03948; match to protein family HMM TIGR00965; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 1586308 dapD 7136659 dapD Acidithiobacillus ferrooxidans ATCC 23270 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase YP_002426238.1 1585484 R 243159 CDS YP_002426239.1 218665674 7135708 complement(1586322..1587542) 1 NC_011761.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR03538; class I and II aminotransferase 1587542 7135708 AFE_1821 Acidithiobacillus ferrooxidans ATCC 23270 class I and II aminotransferase YP_002426239.1 1586322 R 243159 CDS YP_002426240.1 218666818 7137157 1587526..1587909 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1587909 7137157 AFE_1822 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426240.1 1587526 D 243159 CDS YP_002426241.1 218665948 7137067 1587884..1588633 1 NC_011761.1 hypothetical protein 1588633 7137067 AFE_1824 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426241.1 1587884 D 243159 CDS YP_002426242.1 218666119 7134158 complement(1588595..1589269) 1 NC_011761.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 1589269 gph-1 7134158 gph-1 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglycolate phosphatase YP_002426242.1 1588595 R 243159 CDS YP_002426243.1 218667620 7134018 complement(1589262..1589969) 1 NC_011761.1 identified by similarity to SP:P17993; match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01983; 3-demethylubiquinone-9 3-methyltransferase 1589969 ubiG 7134018 ubiG Acidithiobacillus ferrooxidans ATCC 23270 3-demethylubiquinone-9 3-methyltransferase YP_002426243.1 1589262 R 243159 CDS YP_002426244.1 218667710 7135794 complement(1589966..1591291) 1 NC_011761.1 identified by match to protein family HMM PF01979; match to protein family HMM PF07969; amidohydrolase family protein 1591291 7135794 AFE_1826 Acidithiobacillus ferrooxidans ATCC 23270 amidohydrolase family protein YP_002426244.1 1589966 R 243159 CDS YP_002426245.1 218666441 7135493 complement(1591371..1592597) 1 NC_011761.1 identified by similarity to SP:P41052; membrane-bound lytic murein transglycosylase B 1592597 7135493 AFE_1827 Acidithiobacillus ferrooxidans ATCC 23270 membrane-bound lytic murein transglycosylase B YP_002426245.1 1591371 R 243159 CDS YP_002426246.1 218667626 7134387 complement(1592594..1593160) 1 NC_011761.1 identified by match to protein family HMM PF00877; lipoprotein, NLP/P60 family 1593160 7134387 AFE_1828 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein, NLP/P60 family YP_002426246.1 1592594 R 243159 CDS YP_002426247.1 218666228 7135855 complement(1593921..1594574) 1 NC_011761.1 identified by similarity to GB:AAD17960.1; match to protein family HMM PF05494; toluene tolerance protein 1594574 7135855 AFE_1830 Acidithiobacillus ferrooxidans ATCC 23270 toluene tolerance protein YP_002426247.1 1593921 R 243159 CDS YP_002426248.1 218665474 7136585 complement(1594606..1595148) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1595148 7136585 AFE_1831 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426248.1 1594606 R 243159 CDS YP_002426249.1 218666225 7135087 complement(1595176..1595958) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1595958 7135087 AFE_1832 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426249.1 1595176 R 243159 CDS YP_002426250.1 218667581 7136582 complement(1595980..1596930) 1 NC_011761.1 identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigm-70 factor family 1596930 7136582 AFE_1833 Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigm-70 factor family YP_002426250.1 1595980 R 243159 CDS YP_002426251.1 218666692 7135752 complement(1596952..1597308) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1597308 7135752 AFE_1834 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426251.1 1596952 R 243159 CDS YP_002426252.1 218666080 7134563 1597433..1597669 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1597669 7134563 AFE_1835 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426252.1 1597433 D 243159 CDS YP_002426253.1 218665386 7137000 complement(1597950..1598387) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1598387 7137000 AFE_1836 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426253.1 1597950 R 243159 CDS YP_002426254.1 218667884 7136168 1598310..1598579 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1598579 7136168 AFE_1837 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426254.1 1598310 D 243159 CDS YP_002426255.1 218667139 7136543 1598793..1599209 1 NC_011761.1 identified by similarity to PIR:C82434; hypothetical protein 1599209 7136543 AFE_1839 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426255.1 1598793 D 243159 CDS YP_002426256.1 218666458 7134686 complement(1599183..1599374) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1599374 7134686 AFE_1838 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426256.1 1599183 R 243159 CDS YP_002426257.1 218666053 7136726 1600734..1600940 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1600940 7136726 AFE_1841 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426257.1 1600734 D 243159 CDS YP_002426258.1 218665637 7136307 1601311..1603341 1 NC_011761.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1603341 tkt-1 7136307 tkt-1 Acidithiobacillus ferrooxidans ATCC 23270 transketolase YP_002426258.1 1601311 D 243159 CDS YP_002426259.1 218666844 7136360 1603524..1604144 1 NC_011761.1 identified by similarity to GB:AAC80173.1; match to protein family HMM PF00037; match to protein family HMM PF09313; ferredoxin 1604144 7136360 AFE_1844 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002426259.1 1603524 D 243159 CDS YP_002426260.1 218665143 7137093 1604154..1604393 1 NC_011761.1 identified by similarity to GB:CAE32970.1; hypothetical protein 1604393 7137093 AFE_1845 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426260.1 1604154 D 243159 CDS YP_002426261.1 218667748 7134295 1604425..1605513 1 NC_011761.1 identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 1605513 7134295 AFE_1847 Acidithiobacillus ferrooxidans ATCC 23270 C4-dicarboxylate transporter/malic acid transport protein YP_002426261.1 1604425 D 243159 CDS YP_002426262.1 218667041 7134422 complement(1605469..1605729) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1605729 7134422 AFE_1846 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426262.1 1605469 R 243159 CDS YP_002426263.1 218666301 7136641 1605685..1605798 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1605798 7136641 AFE_1849 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426263.1 1605685 D 243159 CDS YP_002426264.1 218666609 7137309 complement(1605780..1606748) 1 NC_011761.1 identified by similarity to SP:P37878; match to protein family HMM PF00730; base excision repair protein, HhH-GPD family 1606748 7137309 AFE_1848 Acidithiobacillus ferrooxidans ATCC 23270 base excision repair protein, HhH-GPD family YP_002426264.1 1605780 R 243159 CDS YP_002426265.1 218665908 7135340 complement(1606749..1606982) 1 NC_011761.1 identified by similarity to GB:AAP04750.1; hypothetical protein 1606982 7135340 AFE_1850 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426265.1 1606749 R 243159 CDS YP_002426266.1 218665259 7134118 complement(1607296..1607940) 1 NC_011761.1 identified by match to protein family HMM PF00535; glycosyl transferase family protein 1607940 7134118 AFE_1851 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002426266.1 1607296 R 243159 CDS YP_002426267.1 218667883 7136200 complement(1608116..1608334) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1608334 7136200 AFE_1852 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426267.1 1608116 R 243159 CDS YP_002426268.1 218667077 7136542 complement(1608344..1608541) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1608541 7136542 AFE_1853 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426268.1 1608344 R 243159 CDS YP_002426269.1 218666378 7136677 complement(1608650..1609906) 1 NC_011761.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 1609906 7136677 AFE_1854 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002426269.1 1608650 R 243159 CDS YP_002426270.1 218667488 7136518 complement(1609899..1610996) 1 NC_011761.1 identified by match to protein family HMM PF07690; hypothetical protein 1610996 7136518 AFE_1855 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426270.1 1609899 R 243159 CDS YP_002426271.1 218667376 7136781 complement(1611053..1612561) 1 NC_011761.1 identified by similarity to GB:AAN30934.1; match to protein family HMM PF00732; match to protein family HMM PF01266; dehydrogenase 1612561 7136781 AFE_1856 Acidithiobacillus ferrooxidans ATCC 23270 dehydrogenase YP_002426271.1 1611053 R 243159 CDS YP_002426272.1 218666078 7136898 complement(1612575..1613360) 1 NC_011761.1 identified by similarity to SP:P39482; match to protein family HMM PF00106; match to protein family HMM PF08659; glucose 1-dehydrogenase 1613360 7136898 AFE_1857 Acidithiobacillus ferrooxidans ATCC 23270 glucose 1-dehydrogenase YP_002426272.1 1612575 R 243159 CDS YP_002426273.1 218666629 7136998 complement(1613357..1613899) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1613899 7136998 AFE_1858 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426273.1 1613357 R 243159 CDS YP_002426274.1 218667511 7134500 complement(1613946..1614134) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1614134 7134500 AFE_1859 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426274.1 1613946 R 243159 CDS YP_002426275.1 218665764 7136376 1614393..1614722 1 NC_011761.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 1614722 phhB 7136376 phhB Acidithiobacillus ferrooxidans ATCC 23270 pterin-4-alpha-carbinolamine dehydratase YP_002426275.1 1614393 D 243159 CDS YP_002426276.1 218667385 7136079 complement(1614644..1615123) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1615123 7136079 AFE_1860 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426276.1 1614644 R 243159 CDS YP_002426277.1 218666894 7136907 1615277..1615501 1 NC_011761.1 identified by match to protein family HMM PF00403; heavy metal-binding protein 1615501 7136907 AFE_1862 Acidithiobacillus ferrooxidans ATCC 23270 heavy metal-binding protein YP_002426277.1 1615277 D 243159 CDS YP_002426278.1 218665960 7134604 1615611..1615721 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1615721 7134604 AFE_1863 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426278.1 1615611 D 243159 CDS YP_002426279.1 218667759 7134171 1615762..1615953 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1615953 7134171 AFE_1864 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426279.1 1615762 D 243159 CDS YP_002426280.1 218667197 7134434 1616064..1616357 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1616357 7134434 AFE_1865 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426280.1 1616064 D 243159 CDS YP_002426281.1 218666224 7134294 complement(1616979..1617434) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1617434 7134294 AFE_1867 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426281.1 1616979 R 243159 CDS YP_002426282.1 218665531 7136581 1617594..1618211 1 NC_011761.1 identified by similarity to SP:P03033; match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498; LexA repressor 1618211 lexA 7136581 lexA Acidithiobacillus ferrooxidans ATCC 23270 LexA repressor YP_002426282.1 1617594 D 243159 CDS YP_002426283.1 218666086 7135902 1618208..1618852 1 NC_011761.1 identified by similarity to SP:P08845; cell division inhibitor 1618852 7135902 AFE_1869 Acidithiobacillus ferrooxidans ATCC 23270 cell division inhibitor YP_002426283.1 1618208 D 243159 CDS YP_002426284.1 218667205 7137007 1618949..1620271 1 NC_011761.1 identified by similarity to GB:AAM40399.1; hypothetical protein 1620271 7137007 AFE_1870 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426284.1 1618949 D 243159 CDS YP_002426285.1 218667676 7135599 1620264..1623311 1 NC_011761.1 identified by match to protein family HMM PF01336; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1623311 7135599 AFE_1871 Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit alpha YP_002426285.1 1620264 D 243159 CDS YP_002426286.1 218665675 7135459 1623552..1624319 1 NC_011761.1 identified by similarity to SP:P77202; thiol:disulfide interchange protein 1624319 7135459 AFE_1872 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange protein YP_002426286.1 1623552 D 243159 CDS YP_002426287.1 218667112 7137158 1624316..1626943 1 NC_011761.1 identified by similarity to SP:P04825; match to protein family HMM PF01433; match to protein family HMM TIGR02414; aminopeptidase N 1626943 pepN 7137158 pepN Acidithiobacillus ferrooxidans ATCC 23270 aminopeptidase N YP_002426287.1 1624316 D 243159 CDS YP_002426288.1 218665697 7136712 complement(1626985..1628454) 1 NC_011761.1 identified by match to protein family HMM PF01928; adenylate cyclase 1628454 7136712 AFE_1874 Acidithiobacillus ferrooxidans ATCC 23270 adenylate cyclase YP_002426288.1 1626985 R 243159 CDS YP_002426289.1 218666757 7137180 complement(1628438..1629076) 1 NC_011761.1 identified by similarity to SP:P07175; ParA-like protein 1629076 7137180 AFE_1875 Acidithiobacillus ferrooxidans ATCC 23270 ParA-like protein YP_002426289.1 1628438 R 243159 CDS YP_002426290.1 218666124 7137252 complement(1629089..1631194) 1 NC_011761.1 identified by similarity to SP:Q9S646; match to protein family HMM PF01816; match to protein family HMM PF02503; polyphosphate kinase 1631194 ppk 7137252 ppk Acidithiobacillus ferrooxidans ATCC 23270 polyphosphate kinase YP_002426290.1 1629089 R 243159 CDS YP_002426291.1 218666288 7134023 complement(1631187..1632053) 1 NC_011761.1 identified by similarity to SP:P24186; match to protein family HMM PF00763; match to protein family HMM PF02882; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 1632053 folD 7134023 folD Acidithiobacillus ferrooxidans ATCC 23270 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase YP_002426291.1 1631187 R 243159 CDS YP_002426292.1 218666930 7137296 complement(1632288..1635368) 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 1635368 7137296 AFE_1878 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002426292.1 1632288 R 243159 CDS YP_002426293.1 218666558 7134640 complement(1635380..1636471) 1 NC_011761.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 1636471 7134640 AFE_1879 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426293.1 1635380 R 243159 CDS YP_002426294.1 218667276 7135288 complement(1636515..1638062) 1 NC_011761.1 identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; NodT family RND efflux system outer membrane lipoprotein 1638062 7135288 AFE_1880 Acidithiobacillus ferrooxidans ATCC 23270 NodT family RND efflux system outer membrane lipoprotein YP_002426294.1 1636515 R 243159 CDS YP_002426295.1 218667629 7135119 1638285..1639073 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1639073 7135119 AFE_1881 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426295.1 1638285 D 243159 CDS YP_002426296.1 218665507 7135803 complement(1639140..1639718) 1 NC_011761.1 identified by similarity to SP:Q02169; match to protein family HMM PF02545; match to protein family HMM TIGR00172; maf protein 1639718 maf-2 7135803 maf-2 Acidithiobacillus ferrooxidans ATCC 23270 maf protein YP_002426296.1 1639140 R 243159 CDS YP_002426297.1 218667274 7135878 complement(1639731..1642520) 1 NC_011761.1 identified by match to protein family HMM PF00311; phosphoenolpyruvate carboxylase 1642520 ppc 7135878 ppc Acidithiobacillus ferrooxidans ATCC 23270 phosphoenolpyruvate carboxylase YP_002426297.1 1639731 R 243159 CDS YP_002426298.1 218665494 7135117 1642855..1643121 1 NC_011761.1 identified by similarity to SP:P25521; match to protein family HMM PF01423; match to protein family HMM TIGR02383; RNA chaperone Hfq 1643121 hfq 7135117 hfq Acidithiobacillus ferrooxidans ATCC 23270 RNA chaperone Hfq YP_002426298.1 1642855 D 243159 CDS YP_002426299.1 218665888 7135107 1643145..1644443 1 NC_011761.1 identified by similarity to SP:P25519; match to protein family HMM PF01926; match to protein family HMM TIGR03156; GTP-binding protein HflX 1644443 hflX 7135107 hflX Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein HflX YP_002426299.1 1643145 D 243159 CDS YP_002426300.1 218667451 7134098 1644458..1645651 1 NC_011761.1 identified by similarity to SP:P25662; match to protein family HMM PF01145; match to protein family HMM TIGR01933; hflK protein 1645651 hflK 7134098 hflK Acidithiobacillus ferrooxidans ATCC 23270 hflK protein YP_002426300.1 1644458 D 243159 CDS YP_002426301.1 218667907 7136742 1645648..1646520 1 NC_011761.1 identified by similarity to SP:P25661; match to protein family HMM PF01145; match to protein family HMM TIGR01932; hflC protein 1646520 hflC 7136742 hflC Acidithiobacillus ferrooxidans ATCC 23270 hflC protein YP_002426301.1 1645648 D 243159 CDS YP_002426302.1 218665624 7135214 1646517..1647719 1 NC_011761.1 identified by similarity to SP:O34459; similarity to SP:Q55267; match to protein family HMM PF00587; ATP phosphoribosyltransferase regulatory subunit 1647719 hisZ 7135214 hisZ Acidithiobacillus ferrooxidans ATCC 23270 ATP phosphoribosyltransferase regulatory subunit YP_002426302.1 1646517 D 243159 CDS YP_002426303.1 218666562 7135567 1647762..1649057 1 NC_011761.1 identified by similarity to SP:P12283; match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthetase 1649057 purA 7135567 purA Acidithiobacillus ferrooxidans ATCC 23270 adenylosuccinate synthetase YP_002426303.1 1647762 D 243159 CDS YP_002426304.1 218667199 7136020 1649232..1651472 1 NC_011761.1 identified by similarity to SP:P21499; match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM PF08461; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R 1651472 vacB 7136020 vacB Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease R YP_002426304.1 1649232 D 243159 CDS YP_002426305.1 218667669 7135593 complement(1651490..1652275) 1 NC_011761.1 identified by similarity to PIR:E83627; match to protein family HMM PF03976; hypothetical protein 1652275 7135593 AFE_1892 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426305.1 1651490 R 243159 CDS YP_002426306.1 218665061 7135452 complement(1652310..1653698) 1 NC_011761.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1653698 7135452 AFE_1893 Acidithiobacillus ferrooxidans ATCC 23270 dihydrolipoamide dehydrogenase YP_002426306.1 1652310 R 243159 CDS YP_002426307.1 218666641 7134990 complement(1653800..1654552) 1 NC_011761.1 identified by match to protein family HMM PF00994; hypothetical protein 1654552 7134990 AFE_1894 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426307.1 1653800 R 243159 CDS YP_002426308.1 218666198 7134512 complement(1654828..1655856) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe1, transposase 1655856 7134512 AFE_1895 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe1, transposase YP_002426308.1 1654828 R 243159 CDS YP_002426309.1 218666213 7136554 complement(1655979..1656638) 1 NC_011761.1 identified by match to protein family HMM PF00551; match to protein family HMM TIGR00639; phosphoribosylglycinamide formyltransferase 1656638 purN 7136554 purN Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylglycinamide formyltransferase YP_002426309.1 1655979 R 243159 CDS YP_002426310.1 218666974 7136569 complement(1656631..1657668) 1 NC_011761.1 identified by similarity to SP:P08178; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1657668 purM 7136569 purM Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylformylglycinamidine cyclo-ligase YP_002426310.1 1656631 R 243159 CDS YP_002426311.1 218665864 7134837 1657670..1657834 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1657834 7134837 AFE_1899 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426311.1 1657670 D 243159 CDS YP_002426312.1 218665031 7135419 complement(1657813..1658430) 1 NC_011761.1 identified by similarity to SP:Q03300; match to protein family HMM PF02777; superoxide dismutase 1658430 sod 7135419 sod Acidithiobacillus ferrooxidans ATCC 23270 superoxide dismutase YP_002426312.1 1657813 R 243159 CDS YP_002426313.1 218665595 7134959 1658587..1659135 1 NC_011761.1 identified by match to protein family HMM PF01066; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1659135 7134959 AFE_1900 Acidithiobacillus ferrooxidans ATCC 23270 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002426313.1 1658587 D 243159 CDS YP_002426314.1 218667999 7135538 1659135..1659845 1 NC_011761.1 identified by match to protein family HMM PF00308; hypothetical protein 1659845 7135538 AFE_1901 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426314.1 1659135 D 243159 CDS YP_002426315.1 218667673 7134763 1659938..1660726 1 NC_011761.1 identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein 1660726 yihY 7134763 yihY Acidithiobacillus ferrooxidans ATCC 23270 YihY family protein YP_002426315.1 1659938 D 243159 CDS YP_002426316.1 218667252 7135456 1660821..1661282 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1661282 7135456 AFE_1903 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426316.1 1660821 D 243159 CDS YP_002426317.1 218668109 7135646 1661322..1661507 1 NC_011761.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1661507 rpmF 7135646 rpmF Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L32 YP_002426317.1 1661322 D 243159 CDS YP_002426318.1 218667153 7136846 1661545..1662570 1 NC_011761.1 identified by match to protein family HMM PF02504; match to protein family HMM TIGR00182; fatty acid/phospholipid synthesis protein PlsX 1662570 plsX 7136846 plsX Acidithiobacillus ferrooxidans ATCC 23270 fatty acid/phospholipid synthesis protein PlsX YP_002426318.1 1661545 D 243159 CDS YP_002426319.1 218665102 7134701 1662567..1663511 1 NC_011761.1 identified by similarity to SP:P24249; match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-(acyl-carrier-protein) synthase III 1663511 fabH 7134701 fabH Acidithiobacillus ferrooxidans ATCC 23270 3-oxoacyl-(acyl-carrier-protein) synthase III YP_002426319.1 1662567 D 243159 CDS YP_002426320.1 218666528 7134253 1663550..1664485 1 NC_011761.1 identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; malonyl CoA-acyl carrier protein transacylase 1664485 fabD 7134253 fabD Acidithiobacillus ferrooxidans ATCC 23270 malonyl CoA-acyl carrier protein transacylase YP_002426320.1 1663550 D 243159 CDS YP_002426321.1 218667860 7136340 1664485..1665234 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; match to protein family HMM TIGR01830; 3-oxoacyl-(acyl-carrier-protein) reductase 1665234 fabG 7136340 fabG Acidithiobacillus ferrooxidans ATCC 23270 3-oxoacyl-(acyl-carrier-protein) reductase YP_002426321.1 1664485 D 243159 CDS YP_002426322.1 218666778 7134938 1665319..1665567 1 NC_011761.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1665567 acpP 7134938 acpP Acidithiobacillus ferrooxidans ATCC 23270 acyl carrier protein YP_002426322.1 1665319 D 243159 CDS YP_002426323.1 218667697 7137274 1665604..1666845 1 NC_011761.1 identified by similarity to SP:P39435; match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150; 3-oxoacyl-(acyl-carrier-protein) synthase II 1666845 fabF 7137274 fabF Acidithiobacillus ferrooxidans ATCC 23270 3-oxoacyl-(acyl-carrier-protein) synthase II YP_002426323.1 1665604 D 243159 CDS YP_002426324.1 218667696 7135480 1666875..1667708 1 NC_011761.1 identified by similarity to SP:P28305; match to protein family HMM PF01063; match to protein family HMM TIGR03461; 4-amino-4-deoxychorismate lyase 1667708 7135480 AFE_1911 Acidithiobacillus ferrooxidans ATCC 23270 4-amino-4-deoxychorismate lyase YP_002426324.1 1666875 D 243159 CDS YP_002426325.1 218667539 7135729 1668715..1669359 1 NC_011761.1 identified by similarity to SP:P37345; match to protein family HMM PF02223; match to protein family HMM TIGR00041; thymidylate kinase 1669359 tmk 7135729 tmk Acidithiobacillus ferrooxidans ATCC 23270 thymidylate kinase YP_002426325.1 1668715 D 243159 CDS YP_002426326.1 218666094 7136405 1669356..1670357 1 NC_011761.1 identified by similarity to SP:P28631; DNA polymerase III subunit delta' 1670357 holB 7136405 holB Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit delta' YP_002426326.1 1669356 D 243159 CDS YP_002426327.1 218666799 7137015 1670341..1670697 1 NC_011761.1 identified by similarity to PIR:B59241; match to protein family HMM PF07238; type IV pilus assembly protein PilZ 1670697 7137015 AFE_1915 Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus assembly protein PilZ YP_002426327.1 1670341 D 243159 CDS YP_002426328.1 218666373 7134951 1671047..1672765 1 NC_011761.1 The gamma subunit of DNA polymerase III is a product of early translation termination of this gene caused by ribosomal slippage; identified by similarity to SP:P06710; match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau 1672765 dnaX 7134951 dnaX Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunits gamma and tau YP_002426328.1 1671047 D 243159 CDS YP_002426329.1 218666428 7136513 1672785..1673108 1 NC_011761.1 identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; hypothetical protein 1673108 7136513 AFE_1920 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426329.1 1672785 D 243159 CDS YP_002426330.1 218667448 7134374 1673115..1673714 1 NC_011761.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1673714 recR 7134374 recR Acidithiobacillus ferrooxidans ATCC 23270 recombination protein RecR YP_002426330.1 1673115 D 243159 CDS YP_002426331.1 218667598 7136739 1673774..1674991 1 NC_011761.1 identified by match to protein family HMM PF00909; ammonium transporter family protein 1674991 amtB 7136739 amtB Acidithiobacillus ferrooxidans ATCC 23270 ammonium transporter family protein YP_002426331.1 1673774 D 243159 CDS YP_002426332.1 218666209 7135771 1674994..1675845 1 NC_011761.1 identified by match to protein family HMM PF01256; match to protein family HMM TIGR00196; hypothetical protein 1675845 7135771 AFE_1923 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426332.1 1674994 D 243159 CDS YP_002426333.1 218665664 7136565 1675832..1677181 1 NC_011761.1 identified by similarity to SP:P53555; match to protein family HMM PF00202; match to protein family HMM TIGR00508; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1677181 bioA 7136565 bioA Acidithiobacillus ferrooxidans ATCC 23270 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_002426333.1 1675832 D 243159 CDS YP_002426334.1 218665954 7137147 1677181..1677636 1 NC_011761.1 identified by match to protein family HMM PF00571; hypothetical protein 1677636 7137147 AFE_1925 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426334.1 1677181 D 243159 CDS YP_002426335.1 218666005 7134164 1677649..1678134 1 NC_011761.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 1678134 7134164 AFE_1926 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426335.1 1677649 D 243159 CDS YP_002426336.1 218668138 7134221 1678124..1679911 1 NC_011761.1 identified by similarity to SP:P23367; match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585; mismatch repair protein MutL 1679911 mutL 7134221 mutL Acidithiobacillus ferrooxidans ATCC 23270 mismatch repair protein MutL YP_002426336.1 1678124 D 243159 CDS YP_002426337.1 218667239 7135957 1679836..1680855 1 NC_011761.1 identified by similarity to SP:P16384; match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA delta(2)-isopentenylpyrophosphate transferase 1680855 miaA 7135957 miaA Acidithiobacillus ferrooxidans ATCC 23270 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002426337.1 1679836 D 243159 CDS YP_002426338.1 218667431 7135633 1681015..1681440 1 NC_011761.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1681440 ndk 7135633 ndk Acidithiobacillus ferrooxidans ATCC 23270 nucleoside diphosphate kinase YP_002426338.1 1681015 D 243159 CDS YP_002426339.1 218666070 7136720 1681444..1682532 1 NC_011761.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; radical SAM enzyme, Cfr family 1682532 7136720 AFE_1930 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM enzyme, Cfr family YP_002426339.1 1681444 D 243159 CDS YP_002426340.1 218666334 7136990 1682625..1683374 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM TIGR02521; type IV pilus biogenesis/stability protein PilW 1683374 pilF 7136990 pilF Acidithiobacillus ferrooxidans ATCC 23270 type IV pilus biogenesis/stability protein PilW YP_002426340.1 1682625 D 243159 CDS YP_002426341.1 218665064 7136473 1683392..1684366 1 NC_011761.1 identified by similarity to GB:AAO54954.1; hypothetical protein 1684366 7136473 AFE_1932 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426341.1 1683392 D 243159 CDS YP_002426342.1 218666696 7134993 1684356..1685456 1 NC_011761.1 identified by similarity to SP:P27433; match to protein family HMM PF04551; match to protein family HMM TIGR00612; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1685456 ispG 7134993 ispG Acidithiobacillus ferrooxidans ATCC 23270 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_002426342.1 1684356 D 243159 CDS YP_002426343.1 218667079 7134567 1685492..1686811 1 NC_011761.1 identified by similarity to SP:P04804; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidyl-tRNA synthetase 1686811 hisS 7134567 hisS Acidithiobacillus ferrooxidans ATCC 23270 histidyl-tRNA synthetase YP_002426343.1 1685492 D 243159 CDS YP_002426344.1 218665406 7136679 1686808..1687419 1 NC_011761.1 identified by similarity to GB:AAQ61198.1; hypothetical protein 1687419 7136679 AFE_1935 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426344.1 1686808 D 243159 CDS YP_002426345.1 218665070 7136188 1687416..1688603 1 NC_011761.1 identified by match to protein family HMM PF01011; match to protein family HMM TIGR03300; PQQ enzyme repeat domain-containing protein 1688603 7136188 AFE_1936 Acidithiobacillus ferrooxidans ATCC 23270 PQQ enzyme repeat domain-containing protein YP_002426345.1 1687416 D 243159 CDS YP_002426346.1 218667499 7134999 1688615..1689964 1 NC_011761.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1689964 engA 7134999 engA Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein EngA YP_002426346.1 1688615 D 243159 CDS YP_002426347.1 218666379 7136364 1689965..1690360 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1690360 7136364 AFE_1938 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426347.1 1689965 D 243159 CDS YP_002426348.1 218665504 7136519 1690555..1691631 1 NC_011761.1 identified by similarity to SP:P06128; match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter substrate-binding protein 1691631 pstS-1 7136519 pstS-1 Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter substrate-binding protein YP_002426348.1 1690555 D 243159 CDS YP_002426349.1 218665853 7135875 1691756..1692712 1 NC_011761.1 identified by similarity to SP:P07653; match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 1692712 pstC_2 7135875 pstC_2 Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter permease YP_002426349.1 1691756 D 243159 CDS YP_002426350.1 218667317 7135408 1692712..1693623 1 NC_011761.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 1693623 pstC_1 7135408 pstC_1 Acidithiobacillus ferrooxidans ATCC 23270 phosphate ABC transporter permease YP_002426350.1 1692712 D 243159 CDS YP_002426351.1 218666201 7135161 complement(1693644..1694408) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1694408 7135161 AFE_1942 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426351.1 1693644 R 243159 CDS YP_002426352.1 218667823 7136557 1694816..1695493 1 NC_011761.1 identified by similarity to SP:P77202; dsbG domain-containing protein 1695493 7136557 AFE_1943 Acidithiobacillus ferrooxidans ATCC 23270 dsbG domain-containing protein YP_002426352.1 1694816 D 243159 CDS YP_002426353.1 218665714 7134901 1695505..1695621 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1695621 7134901 AFE_1944 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426353.1 1695505 D 243159 CDS YP_002426354.1 218667265 7137197 1695634..1696392 1 NC_011761.1 identified by match to protein family HMM PF01925; hypothetical protein 1696392 7137197 AFE_1945 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426354.1 1695634 D 243159 CDS YP_002426355.1 218665127 7135849 complement(1696671..1699781) 1 NC_011761.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; CzcA family heavy metal efflux pump 1699781 7135849 AFE_1947 Acidithiobacillus ferrooxidans ATCC 23270 CzcA family heavy metal efflux pump YP_002426355.1 1696671 R 243159 CDS YP_002426356.1 218666146 7134278 complement(1699774..1701093) 1 NC_011761.1 identified by similarity to SP:P77239; match to protein family HMM TIGR01730; heavy metal efflux transporter MFP subunit 1701093 7134278 AFE_1948 Acidithiobacillus ferrooxidans ATCC 23270 heavy metal efflux transporter MFP subunit YP_002426356.1 1699774 R 243159 CDS YP_002426357.1 218667963 7134046 complement(1701090..1702373) 1 NC_011761.1 identified by similarity to SP:P11092; match to protein family HMM PF02321; outer membrane heavy metal efflux protein 1702373 7134046 AFE_1949 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane heavy metal efflux protein YP_002426357.1 1701090 R 243159 CDS YP_002426358.1 218667062 7135270 1702374..1702610 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1702610 7135270 AFE_1950 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426358.1 1702374 D 243159 CDS YP_002426359.1 218666364 7136662 complement(1703061..1703636) 1 NC_011761.1 identified by match to protein family HMM PF01161; match to protein family HMM TIGR00481; hypothetical protein 1703636 7136662 AFE_1951 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426359.1 1703061 R 243159 CDS YP_002426360.1 218667712 7136504 1704354..1705025 1 NC_011761.1 identified by similarity to GB:AAM03868.1; hypothetical protein 1705025 7136504 AFE_1952 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426360.1 1704354 D 243159 CDS YP_002426361.1 218666064 7135495 1705240..1705455 1 NC_011761.1 identified by similarity to SP:P00208; match to protein family HMM PF00037; ferredoxin 1705455 7135495 AFE_1953 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002426361.1 1705240 D 243159 CDS YP_002426362.1 218665420 7136027 complement(1705635..1706030) 1 NC_011761.1 identified by match to protein family HMM PF01475; Fur family transcriptional regulator 1706030 7136027 AFE_1955 Acidithiobacillus ferrooxidans ATCC 23270 Fur family transcriptional regulator YP_002426362.1 1705635 R 243159 CDS YP_002426363.1 218667371 7135032 complement(1706127..1707218) 1 NC_011761.1 identified by match to protein family HMM PF01266; oxidoreductase, FAD-binding 1707218 7135032 AFE_1956 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, FAD-binding YP_002426363.1 1706127 R 243159 CDS YP_002426364.1 218666713 7136893 complement(1707235..1710789) 1 NC_011761.1 identified by similarity to GB:AAN68501.1; match to protein family HMM PF04357; hypothetical protein 1710789 7136893 AFE_1957 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426364.1 1707235 R 243159 CDS YP_002426365.1 218667177 7137208 complement(1710786..1712516) 1 NC_011761.1 identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein 1712516 7137208 AFE_1958 Acidithiobacillus ferrooxidans ATCC 23270 OMP85 family outer membrane protein YP_002426365.1 1710786 R 243159 CDS YP_002426366.1 218665373 7134726 complement(1712823..1713086) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1713086 7134726 AFE_1959 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426366.1 1712823 R 243159 CDS YP_002426367.1 218665828 7136155 complement(1713192..1714694) 1 NC_011761.1 identified by similarity to SP:P24228; match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1714694 dacB 7136155 dacB Acidithiobacillus ferrooxidans ATCC 23270 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_002426367.1 1713192 R 243159 CDS YP_002426368.1 218666502 7135382 complement(1714728..1715966) 1 NC_011761.1 identified by similarity to SP:P36670; match to protein family HMM PF07690; AmpG permease 1715966 7135382 AFE_1961 Acidithiobacillus ferrooxidans ATCC 23270 AmpG permease YP_002426368.1 1714728 R 243159 CDS YP_002426369.1 218667638 7136314 complement(1716026..1716301) 1 NC_011761.1 identified by match to protein family HMM PF00034; cytochrome c family protein 1716301 7136314 AFE_1962 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c family protein YP_002426369.1 1716026 R 243159 CDS YP_002426370.1 218668148 7135812 1716593..1716865 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1716865 7135812 AFE_1963 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426370.1 1716593 D 243159 CDS YP_002426371.1 218666330 7135967 1717124..1718248 1 NC_011761.1 identified by match to protein family HMM PF00487; fatty acid desaturase 1718248 7135967 AFE_1964 Acidithiobacillus ferrooxidans ATCC 23270 fatty acid desaturase YP_002426371.1 1717124 D 243159 CDS YP_002426372.1 218666815 7136469 complement(1718307..1718711) 1 NC_011761.1 identified by similarity to GB:CAE32024.1; hypothetical protein 1718711 7136469 AFE_1965 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426372.1 1718307 R 243159 CDS YP_002426373.1 218665304 7137064 complement(1718746..1719747) 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 1719747 7137064 AFE_1966 Acidithiobacillus ferrooxidans ATCC 23270 NAD-dependent epimerase/dehydratase family protein YP_002426373.1 1718746 R 243159 CDS YP_002426374.1 218665093 7136245 complement(1719747..1720736) 1 NC_011761.1 identified by similarity to SP:P37420; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM TIGR02197; ADP-L-glycero-D-manno-heptose-6-epimerase 1720736 rfaD 7136245 rfaD Acidithiobacillus ferrooxidans ATCC 23270 ADP-L-glycero-D-manno-heptose-6-epimerase YP_002426374.1 1719747 R 243159 CDS YP_002426375.1 218667088 7135024 1720895..1722880 1 NC_011761.1 identified by match to protein family HMM PF00999; match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM TIGR01409; potassium-efflux system protein 1722880 7135024 AFE_1968 Acidithiobacillus ferrooxidans ATCC 23270 potassium-efflux system protein YP_002426375.1 1720895 D 243159 CDS YP_002426376.1 218666414 7136688 1722976..1724943 1 NC_011761.1 identified by similarity to SP:P31638; match to protein family HMM PF00501; match to protein family HMM TIGR02188; acetyl-CoA synthetase 1724943 acs 7136688 acs Acidithiobacillus ferrooxidans ATCC 23270 acetyl-CoA synthetase YP_002426376.1 1722976 D 243159 CDS YP_002426377.1 218665588 7134360 complement(1725114..1727714) 1 NC_011761.1 identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; clpB protein 1727714 clpB 7134360 clpB Acidithiobacillus ferrooxidans ATCC 23270 clpB protein YP_002426377.1 1725114 R 243159 CDS YP_002426378.1 218666826 7135531 complement(1727754..1728917) 1 NC_011761.1 identified by match to protein family HMM PF07690; transporter 1728917 7135531 AFE_1971 Acidithiobacillus ferrooxidans ATCC 23270 transporter YP_002426378.1 1727754 R 243159 CDS YP_002426379.1 218666925 7137075 complement(1728921..1730012) 1 NC_011761.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 1730012 aroC 7137075 aroC Acidithiobacillus ferrooxidans ATCC 23270 chorismate synthase YP_002426379.1 1728921 R 243159 CDS YP_002426380.1 218667148 7134635 complement(1730016..1730810) 1 NC_011761.1 identified by similarity to GB:CAD85074.1; match to protein family HMM PF02649; match to protein family HMM TIGR00294; hypothetical protein 1730810 7134635 AFE_1973 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426380.1 1730016 R 243159 CDS YP_002426381.1 218665347 7134695 complement(1730852..1732726) 1 NC_011761.1 identified by similarity to SP:P77488; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase 1732726 dxs 7134695 dxs Acidithiobacillus ferrooxidans ATCC 23270 1-deoxy-D-xylulose-5-phosphate synthase YP_002426381.1 1730852 R 243159 CDS YP_002426382.1 218665395 7136128 complement(1732723..1733643) 1 NC_011761.1 identified by similarity to SP:P22939; match to protein family HMM PF00348; geranyltranstransferase 1733643 ispA 7136128 ispA Acidithiobacillus ferrooxidans ATCC 23270 geranyltranstransferase YP_002426382.1 1732723 R 243159 CDS YP_002426383.1 218666625 7136177 complement(1733640..1733909) 1 NC_011761.1 identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280; exodeoxyribonuclease VII small subunit 1733909 xseB 7136177 xseB Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease VII small subunit YP_002426383.1 1733640 R 243159 CDS YP_002426384.1 218665709 7134496 1734020..1735231 1 NC_011761.1 identified by similarity to SP:P52067; match to protein family HMM PF07690; fosmidomycin resistance protein 1735231 7134496 AFE_1977 Acidithiobacillus ferrooxidans ATCC 23270 fosmidomycin resistance protein YP_002426384.1 1734020 D 243159 CDS YP_002426385.1 218665882 7137192 1735352..1736179 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 1736179 7137192 AFE_1978 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002426385.1 1735352 D 243159 CDS YP_002426386.1 218667248 7135437 complement(1736231..1736602) 1 NC_011761.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 1736602 7135437 AFE_1979 Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin YP_002426386.1 1736231 R 243159 CDS YP_002426387.1 218665433 7135642 1736753..1738093 1 NC_011761.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 1738093 xseA 7135642 xseA Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease VII large subunit YP_002426387.1 1736753 D 243159 CDS YP_002426388.1 218666876 7135045 complement(1738201..1739730) 1 NC_011761.1 PQQ enzyme repeat protein 1739730 7135045 AFE_1981 Acidithiobacillus ferrooxidans ATCC 23270 PQQ enzyme repeat protein YP_002426388.1 1738201 R 243159 CDS YP_002426389.1 218665125 7134586 complement(1739731..1740177) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1740177 7134586 AFE_1982 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426389.1 1739731 R 243159 CDS YP_002426390.1 218665823 7134276 1740347..1740529 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1740529 7134276 AFE_1983 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426390.1 1740347 D 243159 CDS YP_002426391.1 218667297 7135377 1740641..1740811 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1740811 7135377 AFE_1984 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426391.1 1740641 D 243159 CDS YP_002426392.1 218665800 7135141 1740920..1741096 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1741096 7135141 AFE_1985 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426392.1 1740920 D 243159 CDS YP_002426393.1 218666929 7136115 1741238..1741750 1 NC_011761.1 identified by similarity to SP:P23869; match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase B 1741750 ppiB 7136115 ppiB Acidithiobacillus ferrooxidans ATCC 23270 peptidyl-prolyl cis-trans isomerase B YP_002426393.1 1741238 D 243159 CDS YP_002426394.1 218667284 7134639 1741755..1742528 1 NC_011761.1 identified by similarity to SP:Q9I2V0; match to protein family HMM PF00149; match to protein family HMM TIGR01854; UDP-2,3-diacylglucosamine hydrolase 1742528 lpxH 7134639 lpxH Acidithiobacillus ferrooxidans ATCC 23270 UDP-2,3-diacylglucosamine hydrolase YP_002426394.1 1741755 D 243159 CDS YP_002426395.1 218666193 7135128 1742560..1745043 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation-transporting P-type ATPase 1745043 7135128 AFE_1988 Acidithiobacillus ferrooxidans ATCC 23270 cation-transporting P-type ATPase YP_002426395.1 1742560 D 243159 CDS YP_002426396.1 218666956 7134094 complement(1745133..1746836) 1 NC_011761.1 identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00970; 2-isopropylmalate synthase 1746836 leuA-2 7134094 leuA-2 Acidithiobacillus ferrooxidans ATCC 23270 2-isopropylmalate synthase YP_002426396.1 1745133 R 243159 CDS YP_002426397.1 218665971 7134819 1746978..1747463 1 NC_011761.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 1747463 7134819 AFE_1990 Acidithiobacillus ferrooxidans ATCC 23270 AsnC family transcriptional regulator YP_002426397.1 1746978 D 243159 CDS YP_002426398.1 218667814 7134184 complement(1747596..1748882) 1 NC_011761.1 identified by similarity to GB:BAC50343.1; match to protein family HMM PF03573; hypothetical protein 1748882 7134184 AFE_1991 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426398.1 1747596 R 243159 CDS YP_002426399.1 218665187 7134489 complement(1748961..1750163) 1 NC_011761.1 identified by match to protein family HMM PF03595; C4-dicarboxylate transporter/malic acid transport protein 1750163 7134489 AFE_1992 Acidithiobacillus ferrooxidans ATCC 23270 C4-dicarboxylate transporter/malic acid transport protein YP_002426399.1 1748961 R 243159 CDS YP_002426400.1 218668043 7135673 1750286..1751191 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1751191 7135673 AFE_1993 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002426400.1 1750286 D 243159 CDS YP_002426401.1 218667906 7134808 complement(1751389..1752060) 1 NC_011761.1 identified by similarity to SP:P24199; match to protein family HMM PF00926; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1752060 ribB 7134808 ribB Acidithiobacillus ferrooxidans ATCC 23270 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_002426401.1 1751389 R 243159 CDS YP_002426402.1 218665528 7135213 complement(1752350..1752502) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1752502 7135213 AFE_1996 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426402.1 1752350 R 243159 CDS YP_002426403.1 218665417 7135899 complement(1752620..1753333) 1 NC_011761.1 identified by match to protein family HMM PF00196; match to protein family HMM PF03472; autoinducer-binding transcriptional regulator 1753333 7135899 AFE_1997 Acidithiobacillus ferrooxidans ATCC 23270 autoinducer-binding transcriptional regulator YP_002426403.1 1752620 R 243159 CDS YP_002426404.1 218666851 7136199 1753495..1753926 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1753926 7136199 AFE_1998 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426404.1 1753495 D 243159 CDS YP_002426405.1 218667155 7137100 1754010..1754561 1 NC_011761.1 identified by similarity to SP:P12747; match to protein family HMM PF00765; autoinducer synthesis protein 1754561 7137100 AFE_1999 Acidithiobacillus ferrooxidans ATCC 23270 autoinducer synthesis protein YP_002426405.1 1754010 D 243159 CDS YP_002426406.1 218666254 7134703 1754753..1754911 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1754911 7134703 AFE_2000 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426406.1 1754753 D 243159 CDS YP_002426407.1 218665788 7136611 1754935..1755096 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1755096 7136611 AFE_2001 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426407.1 1754935 D 243159 CDS YP_002426408.1 218667482 7136103 complement(1755112..1755453) 1 NC_011761.1 identified by similarity to GB:AAP77659.1; match to protein family HMM PF01878; hypothetical protein 1755453 7136103 AFE_2002 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426408.1 1755112 R 243159 CDS YP_002426409.1 218667658 7136780 complement(1756381..1756809) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1756809 7136780 AFE_2004 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002426409.1 1756381 R 243159 CDS YP_002426410.1 218665744 7135441 complement(1756864..1757550) 1 NC_011761.1 identified by similarity to GB:BAC41251.1; match to protein family HMM PF01965; isonitrile hydratase 1757550 7135441 AFE_2005 Acidithiobacillus ferrooxidans ATCC 23270 isonitrile hydratase YP_002426410.1 1756864 R 243159 CDS YP_002426411.1 218667115 7136059 complement(1757547..1758206) 1 NC_011761.1 identified by match to protein family HMM PF04299; transcriptional regulator 1758206 7136059 AFE_2006 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002426411.1 1757547 R 243159 CDS YP_002426412.1 218667812 7136715 complement(1758220..1758906) 1 NC_011761.1 identified by similarity to GB:CAD71376.1; hypothetical protein 1758906 7136715 AFE_2007 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426412.1 1758220 R 243159 CDS YP_002426413.1 218667868 7134487 complement(1758878..1759378) 1 NC_011761.1 identified by similarity to GB:AAQ59281.1; hypothetical protein 1759378 7134487 AFE_2008 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426413.1 1758878 R 243159 CDS YP_002426414.1 218665454 7136527 complement(1759466..1759996) 1 NC_011761.1 identified by similarity to GB:AAN32872.1; hypothetical protein 1759996 7136527 AFE_2009 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426414.1 1759466 R 243159 CDS YP_002426415.1 218667665 7135066 complement(1760020..1760247) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1760247 7135066 AFE_2010 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426415.1 1760020 R 243159 CDS YP_002426416.1 218665249 7135448 complement(1760132..1760743) 1 NC_011761.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1760743 7135448 AFE_2011 Acidithiobacillus ferrooxidans ATCC 23270 TetR family transcriptional regulator YP_002426416.1 1760132 R 243159 CDS YP_002426417.1 218667383 7135738 1760818..1761174 1 NC_011761.1 identified by similarity to GB:BAC68441.1; hypothetical protein 1761174 7135738 AFE_2012 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426417.1 1760818 D 243159 CDS YP_002426418.1 218666568 7136905 complement(1761179..1761616) 1 NC_011761.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1761616 7136905 AFE_2013 Acidithiobacillus ferrooxidans ATCC 23270 MarR family transcriptional regulator YP_002426418.1 1761179 R 243159 CDS YP_002426419.1 218667316 7135298 1761720..1762199 1 NC_011761.1 identified by match to protein family HMM PF02627; match to protein family HMM TIGR00778; alkylhydroperoxidase 1762199 7135298 AFE_2014 Acidithiobacillus ferrooxidans ATCC 23270 alkylhydroperoxidase YP_002426419.1 1761720 D 243159 CDS YP_002426420.1 218667772 7135160 1762196..1762681 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1762681 7135160 AFE_2015 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002426420.1 1762196 D 243159 CDS YP_002426421.1 218666968 7136008 complement(1762944..1763678) 1 NC_011761.1 identified by match to protein family HMM PF04012; PspA/IM30 family 1763678 7136008 AFE_2017 Acidithiobacillus ferrooxidans ATCC 23270 PspA/IM30 family YP_002426421.1 1762944 R 243159 CDS YP_002426422.1 218665786 7134831 complement(1763718..1764542) 1 NC_011761.1 identified by similarity to PIR:C70988; hypothetical protein 1764542 7134831 AFE_2018 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426422.1 1763718 R 243159 CDS YP_002426423.1 218666390 7136101 complement(1764539..1765516) 1 NC_011761.1 hypothetical protein 1765516 7136101 AFE_2019 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426423.1 1764539 R 243159 CDS YP_002426424.1 218667790 7134334 1765550..1765960 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1765960 7134334 AFE_2020 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426424.1 1765550 D 243159 CDS YP_002426425.1 218667960 7134465 complement(1766064..1768499) 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 1768499 7134465 AFE_2021 Acidithiobacillus ferrooxidans ATCC 23270 copper-translocating P-type ATPase YP_002426425.1 1766064 R 243159 CDS YP_002426426.1 218666556 7135267 1768717..1769898 1 NC_011761.1 identified by similarity to SP:P23034; match to protein family HMM PF00155; aspartate aminotransferase 1769898 aspC 7135267 aspC Acidithiobacillus ferrooxidans ATCC 23270 aspartate aminotransferase YP_002426426.1 1768717 D 243159 CDS YP_002426427.1 218667050 7135286 complement(1769944..1771128) 1 NC_011761.1 identified by similarity to SP:P33221; match to protein family HMM PF01071; match to protein family HMM PF02222; match to protein family HMM TIGR01142; phosphoribosylglycinamide formyltransferase 2 1771128 purT 7135286 purT Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylglycinamide formyltransferase 2 YP_002426427.1 1769944 R 243159 CDS YP_002426428.1 218667624 7136650 1771228..1772148 1 NC_011761.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 1772148 7136650 AFE_2024 Acidithiobacillus ferrooxidans ATCC 23270 6-phosphogluconate dehydrogenase YP_002426428.1 1771228 D 243159 CDS YP_002426429.1 218666642 7135798 1772149..1773612 1 NC_011761.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1773612 zwf 7135798 zwf Acidithiobacillus ferrooxidans ATCC 23270 glucose-6-phosphate 1-dehydrogenase YP_002426429.1 1772149 D 243159 CDS YP_002426430.1 218666376 7134513 1773881..1774174 1 NC_011761.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 1774174 7134513 AFE_2026 Acidithiobacillus ferrooxidans ATCC 23270 ArsR family transcriptional regulator YP_002426430.1 1773881 D 243159 CDS YP_002426431.1 218665650 7136516 complement(1774177..1775169) 1 NC_011761.1 identified by similarity to SP:Q8X5V6; match to protein family HMM PF01207; tRNA-dihydrouridine synthase A 1775169 dusA 7136516 dusA Acidithiobacillus ferrooxidans ATCC 23270 tRNA-dihydrouridine synthase A YP_002426431.1 1774177 R 243159 CDS YP_002426432.1 218666998 7137133 complement(1775207..1777612) 1 NC_011761.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 1777612 parC 7137133 parC Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase IV subunit A YP_002426432.1 1775207 R 243159 CDS YP_002426433.1 218666865 7134861 complement(1777630..1779600) 1 NC_011761.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1779600 parE 7134861 parE Acidithiobacillus ferrooxidans ATCC 23270 DNA topoisomerase IV subunit B YP_002426433.1 1777630 R 243159 CDS YP_002426434.1 218667145 7137114 1779649..1779747 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1779747 7137114 AFE_2030 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426434.1 1779649 D 243159 CDS YP_002426435.1 218667552 7134692 complement(1779889..1781196) 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 1781196 7134692 AFE_2031 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002426435.1 1779889 R 243159 CDS YP_002426436.1 218665314 7136418 complement(1781193..1781855) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 1781855 7136418 AFE_2032 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002426436.1 1781193 R 243159 CDS YP_002426437.1 218665770 7136255 complement(1781933..1782244) 1 NC_011761.1 identified by match to protein family HMM PF03413; hypothetical protein 1782244 7136255 AFE_2033 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426437.1 1781933 R 243159 CDS YP_002426438.1 218666461 7136085 complement(1782440..1783516) 1 NC_011761.1 identified by similarity to GB:AAM05308.1; hypothetical protein 1783516 7136085 AFE_2034 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426438.1 1782440 R 243159 CDS YP_002426439.1 218667426 7134407 complement(1783559..1786585) 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 1786585 7134407 AFE_2035 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002426439.1 1783559 R 243159 CDS YP_002426440.1 218666315 7136950 complement(1786585..1787625) 1 NC_011761.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 1787625 7136950 AFE_2036 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426440.1 1786585 R 243159 CDS YP_002426441.1 218666087 7136454 complement(1787622..1788971) 1 NC_011761.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 1788971 7136454 AFE_2037 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane efflux protein YP_002426441.1 1787622 R 243159 CDS YP_002426442.1 218666210 7137008 complement(1789245..1789376) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1789376 7137008 AFE_2038 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426442.1 1789245 R 243159 CDS YP_002426443.1 218667123 7136566 complement(1789506..1789661) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1789661 7136566 AFE_2039 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426443.1 1789506 R 243159 CDS YP_002426444.1 218667490 7134669 complement(1789693..1792056) 1 NC_011761.1 identified by match to protein family HMM PF00593; TonB-dependent receptor 1792056 7134669 AFE_2040 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002426444.1 1789693 R 243159 CDS YP_002426445.1 218665790 7136784 complement(1792284..1793237) 1 NC_011761.1 hypothetical protein 1793237 7136784 AFE_2041 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426445.1 1792284 R 243159 CDS YP_002426446.1 218665902 7136105 complement(1793273..1793443) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1793443 7136105 AFE_2042 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426446.1 1793273 R 243159 CDS YP_002426447.1 218666787 7134112 complement(1793364..1796462) 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 1796462 7134112 AFE_2043 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002426447.1 1793364 R 243159 CDS YP_002426448.1 218665365 7137284 complement(1796459..1797469) 1 NC_011761.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 1797469 7137284 AFE_2044 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426448.1 1796459 R 243159 CDS YP_002426449.1 218665106 7136147 complement(1797466..1798809) 1 NC_011761.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 1798809 7136147 AFE_2045 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane efflux protein YP_002426449.1 1797466 R 243159 CDS YP_002426450.1 218668064 7134257 complement(1798806..1798937) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1798937 7134257 AFE_2046 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426450.1 1798806 R 243159 CDS YP_002426451.1 218665748 7136799 1798914..1799030 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1799030 7136799 AFE_2048 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426451.1 1798914 D 243159 CDS YP_002426452.1 218666316 7136063 complement(1799005..1799316) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1799316 7136063 AFE_2047 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426452.1 1799005 R 243159 CDS YP_002426453.1 218667731 7136455 1799351..1799557 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1799557 7136455 AFE_2049 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426453.1 1799351 D 243159 CDS YP_002426454.1 218665079 7135514 1799766..1799963 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1799963 7135514 AFE_2050 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426454.1 1799766 D 243159 CDS YP_002426455.1 218667375 7135008 complement(1800280..1800498) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1800498 7135008 AFE_2051 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426455.1 1800280 R 243159 CDS YP_002426456.1 218666702 7136897 1800608..1801657 1 NC_011761.1 identified by match to protein family HMM PF00892; hypothetical protein 1801657 7136897 AFE_2052 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426456.1 1800608 D 243159 CDS YP_002426457.1 218666018 7134573 1801753..1804200 1 NC_011761.1 identified by similarity to SP:Q9AEM9; match to protein family HMM PF03894; phosphoketolase 1804200 xfp 7134573 xfp Acidithiobacillus ferrooxidans ATCC 23270 phosphoketolase YP_002426457.1 1801753 D 243159 CDS YP_002426458.1 218667026 7134234 1804287..1805069 1 NC_011761.1 hypothetical protein 1805069 7134234 AFE_2054 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426458.1 1804287 D 243159 CDS YP_002426459.1 218667144 7135851 complement(1805316..1806329) 1 NC_011761.1 identified by similarity to SP:P19674; match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966; protein-export membrane protein SecF 1806329 secF 7135851 secF Acidithiobacillus ferrooxidans ATCC 23270 protein-export membrane protein SecF YP_002426459.1 1805316 R 243159 CDS YP_002426460.1 218665217 7134691 complement(1806274..1808058) 1 NC_011761.1 identified by similarity to SP:P19673; match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129; protein-export membrane protein SecD 1808058 secD 7134691 secD Acidithiobacillus ferrooxidans ATCC 23270 protein-export membrane protein SecD YP_002426460.1 1806274 R 243159 CDS YP_002426461.1 218667628 7135705 complement(1808070..1808405) 1 NC_011761.1 identified by similarity to SP:P19677; match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 1808405 7135705 AFE_2058 Acidithiobacillus ferrooxidans ATCC 23270 preprotein translocase subunit YajC YP_002426461.1 1808070 R 243159 CDS YP_002426462.1 218666730 7135802 complement(1808446..1809561) 1 NC_011761.1 identified by similarity to SP:Q54177; match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; queuine tRNA-ribosyltransferase 1809561 tgt 7135802 tgt Acidithiobacillus ferrooxidans ATCC 23270 queuine tRNA-ribosyltransferase YP_002426462.1 1808446 R 243159 CDS YP_002426463.1 218667799 7137225 complement(1809558..1810595) 1 NC_011761.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1810595 queA 7137225 queA Acidithiobacillus ferrooxidans ATCC 23270 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_002426463.1 1809558 R 243159 CDS YP_002426464.1 218666890 7134474 complement(1810604..1811953) 1 NC_011761.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 1811953 7134474 AFE_2061 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426464.1 1810604 R 243159 CDS YP_002426465.1 218665575 7134600 complement(1811968..1812561) 1 NC_011761.1 identified by match to protein family HMM PF00571; hypothetical protein 1812561 7134600 AFE_2062 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426465.1 1811968 R 243159 CDS YP_002426466.1 218667654 7135947 complement(1812624..1813838) 1 NC_011761.1 identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01325; O-succinylhomoserine sulfhydrylase 1813838 metZ 7135947 metZ Acidithiobacillus ferrooxidans ATCC 23270 O-succinylhomoserine sulfhydrylase YP_002426466.1 1812624 R 243159 CDS YP_002426467.1 218666970 7135828 complement(1813835..1815262) 1 NC_011761.1 identified by similarity to SP:P00497; match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1815262 purF 7135828 purF Acidithiobacillus ferrooxidans ATCC 23270 amidophosphoribosyltransferase YP_002426467.1 1813835 R 243159 CDS YP_002426468.1 218665073 7134833 complement(1815270..1815767) 1 NC_011761.1 identified by similarity to SP:P08550; match to protein family HMM PF02674; CvpA family protein 1815767 7134833 AFE_2065 Acidithiobacillus ferrooxidans ATCC 23270 CvpA family protein YP_002426468.1 1815270 R 243159 CDS YP_002426469.1 218667109 7135002 complement(1815764..1817053) 1 NC_011761.1 identified by similarity to SP:P08192; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 1817053 folC 7135002 folC Acidithiobacillus ferrooxidans ATCC 23270 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_002426469.1 1815764 R 243159 CDS YP_002426470.1 218666790 7136709 complement(1817082..1817966) 1 NC_011761.1 identified by match to protein family HMM TIGR00515; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1817966 accD 7136709 accD Acidithiobacillus ferrooxidans ATCC 23270 acetyl-CoA carboxylase, carboxyl transferase subunit beta YP_002426470.1 1817082 R 243159 CDS YP_002426471.1 218667802 7137039 complement(1817963..1818781) 1 NC_011761.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1818781 trpA 7137039 trpA Acidithiobacillus ferrooxidans ATCC 23270 tryptophan synthase subunit alpha YP_002426471.1 1817963 R 243159 CDS YP_002426472.1 218665131 7134477 complement(1818778..1819977) 1 NC_011761.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1819977 trpB 7134477 trpB Acidithiobacillus ferrooxidans ATCC 23270 tryptophan synthase subunit beta YP_002426472.1 1818778 R 243159 CDS YP_002426473.1 218665448 7134282 complement(1819988..1820605) 1 NC_011761.1 identified by similarity to SP:Q56320; match to protein family HMM PF00697; N-(5'phosphoribosyl)anthranilate isomerase 1820605 trpF 7134282 trpF Acidithiobacillus ferrooxidans ATCC 23270 N-(5'phosphoribosyl)anthranilate isomerase YP_002426473.1 1819988 R 243159 CDS YP_002426474.1 218666580 7135060 complement(1820660..1821475) 1 NC_011761.1 identified by similarity to SP:P07649; match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 1821475 truA 7135060 truA Acidithiobacillus ferrooxidans ATCC 23270 tRNA pseudouridine synthase A YP_002426474.1 1820660 R 243159 CDS YP_002426475.1 218666338 7135310 complement(1821488..1823656) 1 NC_011761.1 hypothetical protein 1823656 7135310 AFE_2072 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426475.1 1821488 R 243159 CDS YP_002426476.1 218665376 7136477 1823646..1823741 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1823741 7136477 AFE_2073 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426476.1 1823646 D 243159 CDS YP_002426477.1 218667445 7136158 complement(1823747..1824769) 1 NC_011761.1 identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 1824769 asd 7136158 asd Acidithiobacillus ferrooxidans ATCC 23270 aspartate-semialdehyde dehydrogenase YP_002426477.1 1823747 R 243159 CDS YP_002426478.1 218667254 7136735 complement(1824777..1825853) 1 NC_011761.1 identified by similarity to SP:Q51375; match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 1825853 leuB 7136735 leuB Acidithiobacillus ferrooxidans ATCC 23270 3-isopropylmalate dehydrogenase YP_002426478.1 1824777 R 243159 CDS YP_002426479.1 218667039 7135648 1826012..1826569 1 NC_011761.1 identified by similarity to SP:P32173; match to protein family HMM TIGR02665; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1826569 mobA 7135648 mobA Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_002426479.1 1826012 D 243159 CDS YP_002426480.1 218667968 7136639 1826566..1827060 1 NC_011761.1 identified by match to protein family HMM PF03205; match to protein family HMM TIGR00176; molybdopterin-guanine dinucleotide biosynthesis protein MobB 1827060 mobB 7136639 mobB Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_002426480.1 1826566 D 243159 CDS YP_002426481.1 218665435 7135275 1827063..1828304 1 NC_011761.1 identified by similarity to SP:P12281; match to protein family HMM PF00994; match to protein family HMM PF03453; match to protein family HMM PF03454; match to protein family HMM TIGR00177; molybdopterin biosynthesis MoeA protein 1828304 moeA 7135275 moeA Acidithiobacillus ferrooxidans ATCC 23270 molybdopterin biosynthesis MoeA protein YP_002426481.1 1827063 D 243159 CDS YP_002426482.1 218667190 7135047 complement(1828313..1828954) 1 NC_011761.1 identified by similarity to PIR:I79276; endonuclease 1828954 nuc 7135047 nuc Acidithiobacillus ferrooxidans ATCC 23270 endonuclease YP_002426482.1 1828313 R 243159 CDS YP_002426483.1 218665192 7135583 complement(1829044..1830861) 1 NC_011761.1 identified by similarity to SP:P08395; match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 1830861 sppA 7135583 sppA Acidithiobacillus ferrooxidans ATCC 23270 signal peptide peptidase SppA, 67K type YP_002426483.1 1829044 R 243159 CDS YP_002426484.1 218666940 7135678 complement(1831069..1833978) 1 NC_011761.1 identified by match to protein family HMM PF00128; match to protein family HMM TIGR02401; alpha-amylase family protein 1833978 7135678 AFE_2081 Acidithiobacillus ferrooxidans ATCC 23270 alpha-amylase family protein YP_002426484.1 1831069 R 243159 CDS YP_002426485.1 218667240 7134650 complement(1833984..1835840) 1 NC_011761.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02402; alpha-amylase family protein 1835840 7134650 AFE_2082 Acidithiobacillus ferrooxidans ATCC 23270 alpha-amylase family protein YP_002426485.1 1833984 R 243159 CDS YP_002426486.1 218665084 7135634 complement(1835861..1837096) 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 1837096 7135634 AFE_2083 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002426486.1 1835861 R 243159 CDS YP_002426487.1 218666814 7135014 complement(1837086..1837778) 1 NC_011761.1 identified by similarity to GB:AAL63368.1; hypothetical protein 1837778 7135014 AFE_2084 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426487.1 1837086 R 243159 CDS YP_002426488.1 218666310 7137063 complement(1838097..1838738) 1 NC_011761.1 identified by similarity to GB:AAM31475.1; hypothetical protein 1838738 7137063 AFE_2085 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426488.1 1838097 R 243159 CDS YP_002426489.1 218665645 7136448 complement(1838900..1839337) 1 NC_011761.1 identified by similarity to GB:AAC44757.1; match to protein family HMM PF00011; heat shock protein, Hsp20 family 1839337 7136448 AFE_2086 Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein, Hsp20 family YP_002426489.1 1838900 R 243159 CDS YP_002426490.1 218665134 7137128 complement(1839339..1839485) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1839485 7137128 AFE_2087 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426490.1 1839339 R 243159 CDS YP_002426491.1 218665837 7134285 1839676..1840683 1 NC_011761.1 identified by match to protein family HMM PF08240; match to protein family HMM TIGR02822; zinc-binding alcohol dehydrogenase family protein 1840683 7134285 AFE_2088 Acidithiobacillus ferrooxidans ATCC 23270 zinc-binding alcohol dehydrogenase family protein YP_002426491.1 1839676 D 243159 CDS YP_002426492.1 218667529 7135391 1840701..1841462 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1841462 7135391 AFE_2089 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426492.1 1840701 D 243159 CDS YP_002426493.1 218665295 7136395 1841785..1842726 1 NC_011761.1 identified by similarity to GB:AAQ61923.1; match to protein family HMM PF01435; M48 family peptidase 1842726 7136395 AFE_2090 Acidithiobacillus ferrooxidans ATCC 23270 M48 family peptidase YP_002426493.1 1841785 D 243159 CDS YP_002426494.1 218666163 7136236 1842831..1844360 1 NC_011761.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 1844360 7136236 AFE_2091 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002426494.1 1842831 D 243159 CDS YP_002426495.1 218665558 7134063 1844427..1844729 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1844729 7134063 AFE_2092 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426495.1 1844427 D 243159 CDS YP_002426496.1 218666312 7135930 complement(1844731..1845453) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1845453 7135930 AFE_2093 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426496.1 1844731 R 243159 CDS YP_002426497.1 218667211 7136450 complement(1845543..1845863) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1845863 7136450 AFE_2094 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426497.1 1845543 R 243159 CDS YP_002426498.1 218666250 7135605 complement(1845873..1846232) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1846232 7135605 AFE_2095 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426498.1 1845873 R 243159 CDS YP_002426499.1 218667033 7136607 1847025..1847891 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1847891 7136607 AFE_2096 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426499.1 1847025 D 243159 CDS YP_002426500.1 218665546 7134898 1847993..1849297 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1849297 7134898 AFE_2097 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426500.1 1847993 D 243159 CDS YP_002426501.1 218666079 7135918 complement(1849319..1849468) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1849468 7135918 AFE_2098 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426501.1 1849319 R 243159 CDS YP_002426502.1 218665048 7136999 1849651..1849830 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1849830 7136999 AFE_2099 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426502.1 1849651 D 243159 CDS YP_002426503.1 218668094 7134977 1850942..1851118 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1851118 7134977 AFE_2100 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426503.1 1850942 D 243159 CDS YP_002426504.1 218667245 7136830 complement(1851256..1851498) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1851498 7136830 AFE_2101 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426504.1 1851256 R 243159 CDS YP_002426505.1 218665510 7136498 1853988..1855082 1 NC_011761.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 1855082 7136498 AFE_2103 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426505.1 1853988 D 243159 CDS YP_002426506.1 218667070 7135881 1855079..1858183 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 1858183 7135881 AFE_2104 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002426506.1 1855079 D 243159 CDS YP_002426507.1 218666768 7136670 1858209..1858928 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1858928 7136670 AFE_2105 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002426507.1 1858209 D 243159 CDS YP_002426508.1 218665673 7137264 1858921..1859646 1 NC_011761.1 identified by similarity to GB:AAP29240.1; ABC transporter permease 1859646 7137264 AFE_2106 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426508.1 1858921 D 243159 CDS YP_002426509.1 218667473 7137156 1859689..1860405 1 NC_011761.1 ABC transporter permease 1860405 7137156 AFE_2107 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426509.1 1859689 D 243159 CDS YP_002426510.1 218666332 7136765 complement(1861032..1861232) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1861232 7136765 AFE_2108 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426510.1 1861032 R 243159 CDS YP_002426511.1 218665662 7137257 complement(1861698..1863134) 1 NC_011761.1 identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133; glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit 1863134 gatB 7137257 gatB Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, B subunit YP_002426511.1 1861698 R 243159 CDS YP_002426512.1 218668161 7137145 complement(1863131..1864603) 1 NC_011761.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 1864603 gatA 7137145 gatA Acidithiobacillus ferrooxidans ATCC 23270 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002426512.1 1863131 R 243159 CDS YP_002426513.1 218666897 7135980 complement(1864613..1864900) 1 NC_011761.1 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, C subunit 1864900 gatC 7135980 gatC Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA(Gln)/aspartyl-tRNA(Asn) amidotransferase, C subunit YP_002426513.1 1864613 R 243159 CDS YP_002426514.1 218665789 7134607 complement(1864903..1865742) 1 NC_011761.1 identified by similarity to SP:P76506; match to protein family HMM PF04333; vacJ lipoprotein 1865742 7134607 AFE_2113 Acidithiobacillus ferrooxidans ATCC 23270 vacJ lipoprotein YP_002426514.1 1864903 R 243159 CDS YP_002426515.1 218665136 7136104 complement(1865745..1866404) 1 NC_011761.1 identified by match to protein family HMM PF05494; hypothetical protein 1866404 7136104 AFE_2114 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426515.1 1865745 R 243159 CDS YP_002426516.1 218667007 7134287 complement(1866449..1867552) 1 NC_011761.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03470; radical SAM domain-containing protein 1867552 7134287 AFE_2115 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002426516.1 1866449 R 243159 CDS YP_002426517.1 218665274 7134870 complement(1867658..1868500) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1868500 7134870 AFE_2116 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426517.1 1867658 R 243159 CDS YP_002426518.1 218666093 7136215 complement(1868497..1869513) 1 NC_011761.1 identified by match to protein family HMM TIGR00374; match to protein family HMM TIGR03476; hypothetical protein 1869513 7136215 AFE_2117 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426518.1 1868497 R 243159 CDS YP_002426519.1 218665342 7137014 complement(1869515..1872154) 1 NC_011761.1 identified by similarity to GB:CAD85670.1; match to protein family HMM TIGR03480; hypothetical protein 1872154 7137014 AFE_2118 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426519.1 1869515 R 243159 CDS YP_002426520.1 218665374 7136123 complement(1872198..1873073) 1 NC_011761.1 identified by similarity to SP:Q8DCD5; match to protein family HMM PF04794; match to protein family HMM TIGR03473; hypothetical protein 1873073 7136123 AFE_2119 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426520.1 1872198 R 243159 CDS YP_002426521.1 218667794 7136156 complement(1873075..1874505) 1 NC_011761.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR03471; radical SAM domain-containing protein 1874505 7136156 AFE_2120 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002426521.1 1873075 R 243159 CDS YP_002426522.1 218668119 7134469 complement(1874502..1875662) 1 NC_011761.1 identified by match to protein family HMM PF00535; match to protein family HMM TIGR03472; glycosyl transferase family protein 1875662 7134469 AFE_2121 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl transferase family protein YP_002426522.1 1874502 R 243159 CDS YP_002426523.1 218667725 7136856 complement(1875705..1876694) 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; match to protein family HMM TIGR03466; hypothetical protein 1876694 7136856 AFE_2122 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426523.1 1875705 R 243159 CDS YP_002426524.1 218667949 7135508 complement(1876691..1877404) 1 NC_011761.1 identified by similarity to SP:P24247; match to protein family HMM PF01048; match to protein family HMM TIGR03468; MTA/SAH nucleosidase 1877404 7135508 AFE_2123 Acidithiobacillus ferrooxidans ATCC 23270 MTA/SAH nucleosidase YP_002426524.1 1876691 R 243159 CDS YP_002426525.1 218665690 7135256 complement(1877386..1879317) 1 NC_011761.1 identified by similarity to SP:P33990; match to protein family HMM PF00432; match to protein family HMM TIGR01507; match to protein family HMM TIGR01787; squalene-hopene cyclase 1879317 shc 7135256 shc Acidithiobacillus ferrooxidans ATCC 23270 squalene-hopene cyclase YP_002426525.1 1877386 R 243159 CDS YP_002426526.1 218665783 7137173 complement(1879314..1880357) 1 NC_011761.1 identified by match to protein family HMM PF00494; phytoene/squalene synthetase family protein 1880357 7137173 AFE_2125 Acidithiobacillus ferrooxidans ATCC 23270 phytoene/squalene synthetase family protein YP_002426526.1 1879314 R 243159 CDS YP_002426527.1 218667006 7136098 complement(1880516..1881550) 1 NC_011761.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1881550 gpsA 7136098 gpsA Acidithiobacillus ferrooxidans ATCC 23270 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002426527.1 1880516 R 243159 CDS YP_002426528.1 218666162 7134869 complement(1881554..1882003) 1 NC_011761.1 identified by similarity to SP:P15040; match to protein family HMM PF02556; match to protein family HMM TIGR00809; preprotein translocase, SecB subunit 1882003 secB 7134869 secB Acidithiobacillus ferrooxidans ATCC 23270 preprotein translocase, SecB subunit YP_002426528.1 1881554 R 243159 CDS YP_002426529.1 218668039 7135833 complement(1882734..1883144) 1 NC_011761.1 identified by similarity to PIR:B49205; match to protein family HMM PF01850; virulence-associated protein 1883144 7135833 AFE_2129 Acidithiobacillus ferrooxidans ATCC 23270 virulence-associated protein YP_002426529.1 1882734 R 243159 CDS YP_002426530.1 218665450 7134804 complement(1883141..1883371) 1 NC_011761.1 identified by similarity to SP:Q05459; virulence-associated protein 1883371 7134804 AFE_2130 Acidithiobacillus ferrooxidans ATCC 23270 virulence-associated protein YP_002426530.1 1883141 R 243159 CDS YP_002426531.1 218666102 7135062 complement(1883674..1885194) 1 NC_011761.1 identified by match to protein family HMM PF00171; aldehyde dehydrogenase (NAD) family protein 1885194 7135062 AFE_2131 Acidithiobacillus ferrooxidans ATCC 23270 aldehyde dehydrogenase (NAD) family protein YP_002426531.1 1883674 R 243159 CDS YP_002426532.1 218666412 7137023 1885497..1887209 1 NC_011761.1 identified by similarity to SP:P16659; match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409; prolyl-tRNA synthetase 1887209 proS 7137023 proS Acidithiobacillus ferrooxidans ATCC 23270 prolyl-tRNA synthetase YP_002426532.1 1885497 D 243159 CDS YP_002426533.1 218667095 7134356 1887196..1887678 1 NC_011761.1 identified by match to protein family HMM PF00582; universal stress family protein 1887678 7134356 AFE_2133 Acidithiobacillus ferrooxidans ATCC 23270 universal stress family protein YP_002426533.1 1887196 D 243159 CDS YP_002426534.1 218668139 7136695 complement(1887691..1888356) 1 NC_011761.1 identified by similarity to GB:CAD13844.1; lipoprotein 1888356 7136695 AFE_2134 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426534.1 1887691 R 243159 CDS YP_002426535.1 218665999 7135958 complement(1888361..1889299) 1 NC_011761.1 identified by match to protein family HMM PF02470; mce-like protein 1889299 7135958 AFE_2135 Acidithiobacillus ferrooxidans ATCC 23270 mce-like protein YP_002426535.1 1888361 R 243159 CDS YP_002426536.1 218665473 7134214 1889451..1890104 1 NC_011761.1 identified by similarity to SP:P24206; match to protein family HMM PF01135; protein-L-isoaspartate O-methyltransferase 1890104 pcm-1 7134214 pcm-1 Acidithiobacillus ferrooxidans ATCC 23270 protein-L-isoaspartate O-methyltransferase YP_002426536.1 1889451 D 243159 CDS YP_002426537.1 218667204 7135086 1890111..1890656 1 NC_011761.1 identified by match to protein family HMM PF00857; hydrolase 1890656 7135086 AFE_2137 Acidithiobacillus ferrooxidans ATCC 23270 hydrolase YP_002426537.1 1890111 D 243159 CDS YP_002426538.1 218665893 7135598 1890637..1892490 1 NC_011761.1 identified by match to protein family HMM PF05299; PDZ domain-containing protein 1892490 7135598 AFE_2138 Acidithiobacillus ferrooxidans ATCC 23270 PDZ domain-containing protein YP_002426538.1 1890637 D 243159 CDS YP_002426539.1 218667746 7134103 complement(1892493..1893293) 1 NC_011761.1 identified by similarity to PIR:AF3015; match to protein family HMM PF00149; match to protein family HMM TIGR00282; hypothetical protein 1893293 7134103 AFE_2139 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426539.1 1892493 R 243159 CDS YP_002426540.1 218665497 7134420 complement(1893293..1893868) 1 NC_011761.1 identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase 1893868 7134420 AFE_2140 Acidithiobacillus ferrooxidans ATCC 23270 5-formyltetrahydrofolate cyclo-ligase YP_002426540.1 1893293 R 243159 CDS YP_002426541.1 218667575 7135992 complement(1894099..1894413) 1 NC_011761.1 identified by similarity to GB:AAO28668.1; match to protein family HMM PF05164; hypothetical protein 1894413 7135992 AFE_2142 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426541.1 1894099 R 243159 CDS YP_002426542.1 218667118 7136442 complement(1894441..1894698) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1894698 7136442 AFE_2143 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426542.1 1894441 R 243159 CDS YP_002426543.1 218667125 7134013 1894765..1896675 1 NC_011761.1 identified by similarity to SP:P08150; match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein 2 1896675 7134013 AFE_2144 Acidithiobacillus ferrooxidans ATCC 23270 penicillin-binding protein 2 YP_002426543.1 1894765 D 243159 CDS YP_002426544.1 218666710 7134671 1896688..1897296 1 NC_011761.1 identified by similarity to SP:P14194; match to protein family HMM PF01386; match to protein family HMM TIGR00731; 50S ribosomal protein L25 1897296 rplY 7134671 rplY Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L25 YP_002426544.1 1896688 D 243159 CDS YP_002426545.1 218665738 7137205 1897303..1897872 1 NC_011761.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1897872 pth 7137205 pth Acidithiobacillus ferrooxidans ATCC 23270 peptidyl-tRNA hydrolase YP_002426545.1 1897303 D 243159 CDS YP_002426546.1 218668057 7136053 1897882..1898973 1 NC_011761.1 identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 1898973 ychF 7136053 ychF Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein YchF YP_002426546.1 1897882 D 243159 CDS YP_002426547.1 218666348 7136792 1899031..1899576 1 NC_011761.1 identified by similarity to GB:AAO56394.1; match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 1899576 7136792 AFE_2148 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein YP_002426547.1 1899031 D 243159 CDS YP_002426548.1 218667640 7136487 1899573..1901555 1 NC_011761.1 identified by similarity to SP:P23482; match to protein family HMM PF00361; hydrogenase 4 subunit B 1901555 hyfB 7136487 hyfB Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase 4 subunit B YP_002426548.1 1899573 D 243159 CDS YP_002426549.1 218665331 7135814 1901552..1902493 1 NC_011761.1 identified by similarity to SP:P77858; match to protein family HMM PF00146; hydrogenase-4, C subunit 1902493 hyfC 7135814 hyfC Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-4, C subunit YP_002426549.1 1901552 D 243159 CDS YP_002426550.1 218665975 7136272 1902495..1903172 1 NC_011761.1 identified by similarity to SP:P77524; hydrogenase-4, E subunit 1903172 hyfE 7136272 hyfE Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-4, E subunit YP_002426550.1 1902495 D 243159 CDS YP_002426551.1 218666660 7134189 1903172..1904626 1 NC_011761.1 identified by similarity to SP:P77437; match to protein family HMM PF00361; hydrogenase 4 subunit F 1904626 hyfF 7134189 hyfF Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase 4 subunit F YP_002426551.1 1903172 D 243159 CDS YP_002426552.1 218665490 7134531 1904637..1906184 1 NC_011761.1 identified by similarity to SP:P77329; match to protein family HMM PF00329; match to protein family HMM PF00346; hydrogenase-4, G subunit 1906184 hyfG 7134531 hyfG Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-4, G subunit YP_002426552.1 1904637 D 243159 CDS YP_002426553.1 218667213 7135103 1906221..1906718 1 NC_011761.1 identified by similarity to SP:P77668; match to protein family HMM PF01058; hydrogenase-4, I subunit 1906718 hyfI 7135103 hyfI Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase-4, I subunit YP_002426553.1 1906221 D 243159 CDS YP_002426554.1 218665228 7135607 1906975..1908354 1 NC_011761.1 catalyzes the carboxylation of D-ribulose 1,5-bisphosphate in carbon dioxide fixation; ribulose bisphosphate carboxylase 1908354 cbbL2 7135607 cbbL2 Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisphosphate carboxylase YP_002426554.1 1906975 D 243159 CDS YP_002426555.1 218666811 7135716 1908504..1909322 1 NC_011761.1 identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406; CbbQ protein 1909322 cbbQ-2 7135716 cbbQ-2 Acidithiobacillus ferrooxidans ATCC 23270 CbbQ protein YP_002426555.1 1908504 D 243159 CDS YP_002426556.1 218667403 7137060 1909341..1911620 1 NC_011761.1 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 1911620 7137060 AFE_2157 Acidithiobacillus ferrooxidans ATCC 23270 von Willebrand factor type A domain-containing protein YP_002426556.1 1909341 D 243159 CDS YP_002426557.1 218667231 7136926 complement(1911627..1912532) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 1912532 7136926 AFE_2158 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002426557.1 1911627 R 243159 CDS YP_002426558.1 218667055 7135625 complement(1912535..1912876) 1 NC_011761.1 identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686; alkylphosphonate utilization operon protein PhnA 1912876 phnA 7135625 phnA Acidithiobacillus ferrooxidans ATCC 23270 alkylphosphonate utilization operon protein PhnA YP_002426558.1 1912535 R 243159 CDS YP_002426559.1 218667932 7136655 complement(1912890..1913597) 1 NC_011761.1 identified by similarity to GB:CAE33855.1; hypothetical protein 1913597 7136655 AFE_2160 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426559.1 1912890 R 243159 CDS YP_002426560.1 218665114 7135239 1913830..1915695 1 NC_011761.1 identified by similarity to GB:AAM36869.1; hypothetical protein 1915695 7135239 AFE_2161 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426560.1 1913830 D 243159 CDS YP_002426561.1 218666180 7134265 1915692..1915805 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1915805 7134265 AFE_2162 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426561.1 1915692 D 243159 CDS YP_002426562.1 218665611 7134081 1916382..1916969 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1916969 7134081 AFE_2163 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426562.1 1916382 D 243159 CDS YP_002426563.1 218665156 7135554 1916988..1917176 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1917176 7135554 AFE_2164 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426563.1 1916988 D 243159 CDS YP_002426564.1 218667129 7134308 1917733..1918266 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1918266 7134308 AFE_2165 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426564.1 1917733 D 243159 CDS YP_002426565.1 218665040 7134676 1918446..1919783 1 NC_011761.1 identified by similarity to SP:P22519; match to protein family HMM PF00529; toxin secretion protein, HlyD family 1919783 7134676 AFE_2166 Acidithiobacillus ferrooxidans ATCC 23270 toxin secretion protein, HlyD family YP_002426565.1 1918446 D 243159 CDS YP_002426566.1 218667586 7134969 1919780..1921951 1 NC_011761.1 identified by similarity to SP:P22520; match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; toxin secretion ABC transporter ATP-binding protein, HlyB family 1921951 7134969 AFE_2167 Acidithiobacillus ferrooxidans ATCC 23270 toxin secretion ABC transporter ATP-binding protein, HlyB family YP_002426566.1 1919780 D 243159 CDS YP_002426567.1 218665178 7135757 1921986..1923476 1 NC_011761.1 identified by similarity to SP:P11092; match to protein family HMM PF02321; outer membrane toxin secretion efflux protein 1923476 7135757 AFE_2169 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane toxin secretion efflux protein YP_002426567.1 1921986 D 243159 CDS YP_002426568.1 218666516 7135663 complement(1923425..1923649) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1923649 7135663 AFE_2168 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426568.1 1923425 R 243159 CDS YP_002426569.1 218665767 7136328 1923632..1924402 1 NC_011761.1 identified by match to protein family HMM PF01522; polysaccharide deacetylase family protein 1924402 7136328 AFE_2170 Acidithiobacillus ferrooxidans ATCC 23270 polysaccharide deacetylase family protein YP_002426569.1 1923632 D 243159 CDS YP_002426570.1 218667152 7136082 1924414..1925781 1 NC_011761.1 GTP-binding protein 1925781 7136082 AFE_2171 Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein YP_002426570.1 1924414 D 243159 CDS YP_002426571.1 218667843 7134700 1925808..1927094 1 NC_011761.1 identified by match to protein family HMM PF00144; beta-lactamase 1927094 7134700 AFE_2172 Acidithiobacillus ferrooxidans ATCC 23270 beta-lactamase YP_002426571.1 1925808 D 243159 CDS YP_002426572.1 218665390 7134921 complement(1927119..1927649) 1 NC_011761.1 identified by match to protein family HMM PF00293; NUDIX hydrolase 1927649 7134921 AFE_2173 Acidithiobacillus ferrooxidans ATCC 23270 NUDIX hydrolase YP_002426572.1 1927119 R 243159 CDS YP_002426573.1 218665341 7136172 complement(1927731..1928174) 1 NC_011761.1 identified by match to protein family HMM PF00293; NUDIX hydrolase 1928174 7136172 AFE_2174 Acidithiobacillus ferrooxidans ATCC 23270 NUDIX hydrolase YP_002426573.1 1927731 R 243159 CDS YP_002426574.1 218665791 7136122 complement(1928171..1928926) 1 NC_011761.1 identified by similarity to SP:P33918; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal small subunit pseudouridine synthase A 1928926 rsuA 7136122 rsuA Acidithiobacillus ferrooxidans ATCC 23270 ribosomal small subunit pseudouridine synthase A YP_002426574.1 1928171 R 243159 CDS YP_002426575.1 218667434 7136106 1928969..1930000 1 NC_011761.1 identified by match to protein family HMM PF04371; peptidyl-arginine deiminase 1930000 7136106 AFE_2176 Acidithiobacillus ferrooxidans ATCC 23270 peptidyl-arginine deiminase YP_002426575.1 1928969 D 243159 CDS YP_002426576.1 218666134 7136723 1930213..1932942 1 NC_011761.1 identified by similarity to GB:CAC86937.1; match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; sulfur reductase, molybdopterin subunit 1932942 sreA 7136723 sreA Acidithiobacillus ferrooxidans ATCC 23270 sulfur reductase, molybdopterin subunit YP_002426576.1 1930213 D 243159 CDS YP_002426577.1 218667094 7134034 1932953..1933576 1 NC_011761.1 identified by similarity to GB:CAC86938.1; match to protein family HMM PF00037; sulfur reductase, iron-sulfur binding subunit 1933576 sreB 7134034 sreB Acidithiobacillus ferrooxidans ATCC 23270 sulfur reductase, iron-sulfur binding subunit YP_002426577.1 1932953 D 243159 CDS YP_002426578.1 218667793 7136694 1933573..1934607 1 NC_011761.1 identified by match to protein family HMM PF03916; sulfur reductase, membrane subunit 1934607 sreC 7136694 sreC Acidithiobacillus ferrooxidans ATCC 23270 sulfur reductase, membrane subunit YP_002426578.1 1933573 D 243159 CDS YP_002426579.1 218666567 7134468 1934549..1935115 1 NC_011761.1 identified by similarity to GB:BAC59713.1; sulfur reductase 1935115 sreD 7134468 sreD Acidithiobacillus ferrooxidans ATCC 23270 sulfur reductase YP_002426579.1 1934549 D 243159 CDS YP_002426580.1 218665302 7135297 complement(1935091..1935768) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1935768 7135297 AFE_2180 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426580.1 1935091 R 243159 CDS YP_002426581.1 218665897 7136243 complement(1935894..1936169) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1936169 7136243 AFE_2182 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426581.1 1935894 R 243159 CDS YP_002426582.1 218667786 7134107 complement(1936227..1936658) 1 NC_011761.1 identified by match to protein family HMM PF00582; universal stress family protein 1936658 7134107 AFE_2183 Acidithiobacillus ferrooxidans ATCC 23270 universal stress family protein YP_002426582.1 1936227 R 243159 CDS YP_002426583.1 218666476 7134461 complement(1936711..1938255) 1 NC_011761.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; EmrB/QacA family drug resistance transporter 1938255 7134461 AFE_2184 Acidithiobacillus ferrooxidans ATCC 23270 EmrB/QacA family drug resistance transporter YP_002426583.1 1936711 R 243159 CDS YP_002426584.1 218665428 7136286 complement(1938258..1938701) 1 NC_011761.1 identified by match to protein family HMM PF01047; MarR family transcriptional regulator 1938701 7136286 AFE_2185 Acidithiobacillus ferrooxidans ATCC 23270 MarR family transcriptional regulator YP_002426584.1 1938258 R 243159 CDS YP_002426585.1 218665936 7135040 1938886..1939704 1 NC_011761.1 identified by similarity to SP:P37149; match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 1939704 lgt 7135040 lgt Acidithiobacillus ferrooxidans ATCC 23270 prolipoprotein diacylglyceryl transferase YP_002426585.1 1938886 D 243159 CDS YP_002426586.1 218665213 7134146 1939726..1941714 1 NC_011761.1 identified by similarity to SP:P09980; match to protein family HMM PF00580; ATP-dependent DNA helicase Rep 1941714 rep 7134146 rep Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase Rep YP_002426586.1 1939726 D 243159 CDS YP_002426587.1 218667755 7135701 complement(1941815..1942090) 1 NC_011761.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1942090 rpsT 7135701 rpsT Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S20 YP_002426587.1 1941815 R 243159 CDS YP_002426588.1 218665444 7134429 complement(1942226..1943239) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1943239 7134429 AFE_2189 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002426588.1 1942226 R 243159 CDS YP_002426589.1 218666313 7135056 complement(1943259..1944062) 1 NC_011761.1 identified by match to protein family HMM PF00528; ABC transporter permease 1944062 7135056 AFE_2190 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426589.1 1943259 R 243159 CDS YP_002426590.1 218667247 7136452 1944076..1944291 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1944291 7136452 AFE_2191 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426590.1 1944076 D 243159 CDS YP_002426591.1 218667880 7135641 1944279..1944716 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1944716 7135641 AFE_2192 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426591.1 1944279 D 243159 CDS YP_002426592.1 218666449 7136539 1944720..1945559 1 NC_011761.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 1945559 apaH 7136539 apaH Acidithiobacillus ferrooxidans ATCC 23270 diadenosine tetraphosphatase YP_002426592.1 1944720 D 243159 CDS YP_002426593.1 218665854 7134395 1945615..1947426 1 NC_011761.1 identified by similarity to SP:P15043; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 1947426 recQ 7134395 recQ Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase RecQ YP_002426593.1 1945615 D 243159 CDS YP_002426594.1 218668115 7135409 1947514..1947828 1 NC_011761.1 identified by match to protein family HMM PF01491; match to protein family HMM TIGR03421; cyaY protein 1947828 cyaY 7135409 cyaY Acidithiobacillus ferrooxidans ATCC 23270 cyaY protein YP_002426594.1 1947514 D 243159 CDS YP_002426595.1 218665804 7136852 1947833..1948285 1 NC_011761.1 identified by similarity to PIR:D75504; match to protein family HMM PF01878; hypothetical protein 1948285 7136852 AFE_2196 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426595.1 1947833 D 243159 CDS YP_002426596.1 218665181 7135358 1948275..1948373 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1948373 7135358 AFE_2198 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426596.1 1948275 D 243159 CDS YP_002426597.1 218666827 7135667 complement(1948351..1948776) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1948776 7135667 AFE_2197 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426597.1 1948351 R 243159 CDS YP_002426598.1 218667335 7137076 complement(1948739..1949812) 1 NC_011761.1 identified by match to protein family HMM PF03739; YjgP/YjgQ family protein 1949812 7137076 AFE_2199 Acidithiobacillus ferrooxidans ATCC 23270 YjgP/YjgQ family protein YP_002426598.1 1948739 R 243159 CDS YP_002426599.1 218665831 7135180 complement(1949809..1950930) 1 NC_011761.1 identified by match to protein family HMM PF03739; YjgP/YjgQ family protein 1950930 7135180 AFE_2200 Acidithiobacillus ferrooxidans ATCC 23270 YjgP/YjgQ family protein YP_002426599.1 1949809 R 243159 CDS YP_002426600.1 218667067 7135385 1951047..1952549 1 NC_011761.1 identified by similarity to SP:P11648; match to protein family HMM PF00883; match to protein family HMM PF02789; cytosol aminopeptidase 1952549 pepA 7135385 pepA Acidithiobacillus ferrooxidans ATCC 23270 cytosol aminopeptidase YP_002426600.1 1951047 D 243159 CDS YP_002426601.1 218665282 7136667 1952562..1952987 1 NC_011761.1 identified by similarity to SP:P28905; match to protein family HMM PF04364; DNA polymerase III subunit chi 1952987 holC 7136667 holC Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase III subunit chi YP_002426601.1 1952562 D 243159 CDS YP_002426602.1 218665871 7136223 complement(1952940..1953743) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1953743 7136223 AFE_2202 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426602.1 1952940 R 243159 CDS YP_002426603.1 218668001 7135426 1953693..1956509 1 NC_011761.1 identified by similarity to SP:P07118; match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valyl-tRNA synthetase 1956509 valS 7135426 valS Acidithiobacillus ferrooxidans ATCC 23270 valyl-tRNA synthetase YP_002426603.1 1953693 D 243159 CDS YP_002426604.1 218666204 7134765 1956585..1957895 1 NC_011761.1 identified by match to protein family HMM PF06965; match to protein family HMM TIGR00773; Na+/H+ antiporter NhaA 1957895 nhaA 7134765 nhaA Acidithiobacillus ferrooxidans ATCC 23270 Na+/H+ antiporter NhaA YP_002426604.1 1956585 D 243159 CDS YP_002426605.1 218667852 7136560 1957892..1958719 1 NC_011761.1 identified by similarity to SP:P30011; match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide pyrophosphorylase 1958719 nadC 7136560 nadC Acidithiobacillus ferrooxidans ATCC 23270 nicotinate-nucleotide pyrophosphorylase YP_002426605.1 1957892 D 243159 CDS YP_002426606.1 218666761 7134930 complement(1958732..1959976) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1959976 7134930 AFE_2207 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426606.1 1958732 R 243159 CDS YP_002426607.1 218666691 7137256 1960136..1960750 1 NC_011761.1 identified by match to protein family HMM PF00440; TetR family transcriptional regulator 1960750 7137256 AFE_2209 Acidithiobacillus ferrooxidans ATCC 23270 TetR family transcriptional regulator YP_002426607.1 1960136 D 243159 CDS YP_002426608.1 218666550 7134562 complement(1960736..1960855) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1960855 7134562 AFE_2208 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426608.1 1960736 R 243159 CDS YP_002426609.1 218667244 7135280 1960842..1961570 1 NC_011761.1 identified by match to protein family HMM PF01738; match to protein family HMM PF08840; carboxymethylenebutenolidase family protein 1961570 7135280 AFE_2210 Acidithiobacillus ferrooxidans ATCC 23270 carboxymethylenebutenolidase family protein YP_002426609.1 1960842 D 243159 CDS YP_002426610.1 218666012 7135638 1961567..1962643 1 NC_011761.1 identified by match to protein family HMM PF00724; FAD/FMN-binding oxidoreductase 1962643 7135638 AFE_2211 Acidithiobacillus ferrooxidans ATCC 23270 FAD/FMN-binding oxidoreductase YP_002426610.1 1961567 D 243159 CDS YP_002426611.1 218666939 7134228 complement(1962726..1963352) 1 NC_011761.1 identified by similarity to GB:AAM38230.1; hypothetical protein 1963352 7134228 AFE_2212 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426611.1 1962726 R 243159 CDS YP_002426612.1 218665201 7136016 1963560..1964126 1 NC_011761.1 identified by similarity to GB:AAM40463.1; match to protein family HMM PF05656; hypothetical protein 1964126 7136016 AFE_2214 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426612.1 1963560 D 243159 CDS YP_002426613.1 218668071 7135688 1964159..1964953 1 NC_011761.1 identified by match to protein family HMM TIGR01444; FkbM family methyltransferase 1964953 7135688 AFE_2215 Acidithiobacillus ferrooxidans ATCC 23270 FkbM family methyltransferase YP_002426613.1 1964159 D 243159 CDS YP_002426614.1 218666279 7136807 1965070..1965963 1 NC_011761.1 identified by match to protein family HMM PF00561; alpha/beta hydrolase 1965963 7136807 AFE_2217 Acidithiobacillus ferrooxidans ATCC 23270 alpha/beta hydrolase YP_002426614.1 1965070 D 243159 CDS YP_002426615.1 218666214 7137287 complement(1965956..1966525) 1 NC_011761.1 identified by match to protein family HMM PF04140; hypothetical protein 1966525 7137287 AFE_2216 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426615.1 1965956 R 243159 CDS YP_002426616.1 218665437 7136570 complement(1966631..1967314) 1 NC_011761.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase 1967314 7136570 AFE_2218 Acidithiobacillus ferrooxidans ATCC 23270 HAD-superfamily hydrolase YP_002426616.1 1966631 R 243159 CDS YP_002426617.1 218668096 7135049 complement(1967311..1968264) 1 NC_011761.1 identified by similarity to SP:P23851; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase C 1968264 rluC 7135049 rluC Acidithiobacillus ferrooxidans ATCC 23270 ribosomal large subunit pseudouridine synthase C YP_002426617.1 1967311 R 243159 CDS YP_002426618.1 218665963 7136832 1968461..1970809 1 NC_011761.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family 1970809 7136832 AFE_2220 Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease, Rne/Rng family YP_002426618.1 1968461 D 243159 CDS YP_002426619.1 218665072 7134174 complement(1970852..1972240) 1 NC_011761.1 identified by similarity to SP:P21888; match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteinyl-tRNA synthetase 1972240 cysS 7134174 cysS Acidithiobacillus ferrooxidans ATCC 23270 cysteinyl-tRNA synthetase YP_002426619.1 1970852 R 243159 CDS YP_002426620.1 218665930 7135001 complement(1972237..1973763) 1 NC_011761.1 identified by similarity to SP:P22250; match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamyl-tRNA synthetase 1973763 gltX-1 7135001 gltX-1 Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA synthetase YP_002426620.1 1972237 R 243159 CDS YP_002426621.1 218666744 7134140 1973783..1976272 1 NC_011761.1 identified by similarity to SP:P31776; match to protein family HMM PF00905; match to protein family HMM PF00912; penicillin-binding protein 1A 1976272 7134140 AFE_2223 Acidithiobacillus ferrooxidans ATCC 23270 penicillin-binding protein 1A YP_002426621.1 1973783 D 243159 CDS YP_002426622.1 218666451 7137239 1976273..1978633 1 NC_011761.1 identified by match to protein family HMM PF00723; match to protein family HMM PF09137; glycosyl hydrolase family protein 1978633 7137239 AFE_2224 Acidithiobacillus ferrooxidans ATCC 23270 glycosyl hydrolase family protein YP_002426622.1 1976273 D 243159 CDS YP_002426623.1 218665903 7134397 1978630..1979415 1 NC_011761.1 identified by similarity to SP:P39482; match to protein family HMM PF00106; match to protein family HMM PF08659; glucose 1-dehydrogenase 1979415 7134397 AFE_2225 Acidithiobacillus ferrooxidans ATCC 23270 glucose 1-dehydrogenase YP_002426623.1 1978630 D 243159 CDS YP_002426624.1 218667822 7134113 1979574..1981256 1 NC_011761.1 identified by match to protein family HMM PF01636; hypothetical protein 1981256 7134113 AFE_2226 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426624.1 1979574 D 243159 CDS YP_002426625.1 218668127 7134900 1981381..1982007 1 NC_011761.1 identified by match to protein family HMM PF00702; HAD-superfamily hydrolase 1982007 7134900 AFE_2227 Acidithiobacillus ferrooxidans ATCC 23270 HAD-superfamily hydrolase YP_002426625.1 1981381 D 243159 CDS YP_002426626.1 218667388 7136864 complement(1982060..1982803) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator KdpE 1982803 kdpE 7136864 kdpE Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator KdpE YP_002426626.1 1982060 R 243159 CDS YP_002426627.1 218666729 7136911 complement(1982807..1985548) 1 NC_011761.1 identified by similarity to SP:P21865; match to protein family HMM PF00512; match to protein family HMM PF00582; match to protein family HMM PF02518; match to protein family HMM PF02702; sensor histidine kinase KdpD 1985548 kdpD 7136911 kdpD Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase KdpD YP_002426627.1 1982807 R 243159 CDS YP_002426628.1 218665439 7137224 1985780..1985914 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1985914 7137224 AFE_2230 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426628.1 1985780 D 243159 CDS YP_002426629.1 218667903 7135051 1985911..1986003 1 NC_011761.1 identified by match to protein family HMM TIGR02115; K+-transporting ATPase subunit F 1986003 kdpF-2 7135051 kdpF-2 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit F YP_002426629.1 1985911 D 243159 CDS YP_002426630.1 218667602 7135210 1986000..1987751 1 NC_011761.1 identified by match to protein family HMM PF03814; match to protein family HMM TIGR00680; K+-transporting ATPase, A subunit 1987751 kdpA-3 7135210 kdpA-3 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase, A subunit YP_002426630.1 1986000 D 243159 CDS YP_002426631.1 218668151 7135776 1987764..1989833 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497; K+-transporting ATPase subunit B 1989833 kdpB-2 7135776 kdpB-2 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit B YP_002426631.1 1987764 D 243159 CDS YP_002426632.1 218667227 7135970 1989846..1990466 1 NC_011761.1 identified by match to protein family HMM PF02669; match to protein family HMM TIGR00681; K+-transporting ATPase subunit C 1990466 kdpC-2 7135970 kdpC-2 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit C YP_002426632.1 1989846 D 243159 CDS YP_002426633.1 218665829 7135621 1990514..1990780 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1990780 7135621 AFE_2235 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426633.1 1990514 D 243159 CDS YP_002426634.1 218665296 7135383 1990832..1990930 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1990930 7135383 AFE_2236 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426634.1 1990832 D 243159 CDS YP_002426635.1 218666173 7136237 1990978..1991508 1 NC_011761.1 identified by match to protein family HMM PF00696; amino acid kinase family protein 1991508 7136237 AFE_2238 Acidithiobacillus ferrooxidans ATCC 23270 amino acid kinase family protein YP_002426635.1 1990978 D 243159 CDS YP_002426636.1 218665256 7134073 complement(1991495..1991758) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1991758 7134073 AFE_2237 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426636.1 1991495 R 243159 CDS YP_002426637.1 218666178 7135745 1991751..1992794 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1992794 7135745 AFE_2239 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426637.1 1991751 D 243159 CDS YP_002426638.1 218667532 7134079 1992850..1993248 1 NC_011761.1 identified by similarity to SP:P38504; match to protein family HMM PF00543; nitrogen regulatory protein P-II 2 1993248 glnK-2 7134079 glnK-2 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulatory protein P-II 2 YP_002426638.1 1992850 D 243159 CDS YP_002426639.1 218665919 7136398 1993245..1993544 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1993544 7136398 AFE_2241 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426639.1 1993245 D 243159 CDS YP_002426640.1 218667836 7134129 1993603..1993962 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1993962 7134129 AFE_2242 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426640.1 1993603 D 243159 CDS YP_002426641.1 218665562 7134914 1993972..1994064 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1994064 7134914 AFE_2243 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426641.1 1993972 D 243159 CDS YP_002426642.1 218666268 7135934 1994243..1994515 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1994515 7135934 AFE_2244 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426642.1 1994243 D 243159 CDS YP_002426643.1 218667660 7136625 1994717..1995910 1 NC_011761.1 identified by match to protein family HMM PF00999; Na+/H+ antiporter 1995910 7136625 AFE_2245 Acidithiobacillus ferrooxidans ATCC 23270 Na+/H+ antiporter YP_002426643.1 1994717 D 243159 CDS YP_002426644.1 218665900 7135443 1996010..1996174 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1996174 7135443 AFE_2247 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426644.1 1996010 D 243159 CDS YP_002426645.1 218667351 7134110 complement(1996167..1996772) 1 NC_011761.1 identified by similarity to SP:P77202; dsbG domain-containing protein 1996772 7134110 AFE_2246 Acidithiobacillus ferrooxidans ATCC 23270 dsbG domain-containing protein YP_002426645.1 1996167 R 243159 CDS YP_002426646.1 218665654 7136873 complement(1996887..1997327) 1 NC_011761.1 lipoprotein 1997327 7136873 AFE_2248 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426646.1 1996887 R 243159 CDS YP_002426647.1 218665393 7137137 1997133..1997552 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 1997552 7137137 AFE_2249 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426647.1 1997133 D 243159 CDS YP_002426648.1 218667547 7136175 complement(1997955..1999076) 1 NC_011761.1 identified by match to protein family HMM PF04966; carbohydrate-selective porin, OprB family 1999076 7136175 AFE_2250 Acidithiobacillus ferrooxidans ATCC 23270 carbohydrate-selective porin, OprB family YP_002426648.1 1997955 R 243159 CDS YP_002426649.1 218666655 7136413 complement(1999089..2000276) 1 NC_011761.1 identified by similarity to SP:P54741; PQQ enzyme repeat domain-containing protein 2000276 7136413 AFE_2251 Acidithiobacillus ferrooxidans ATCC 23270 PQQ enzyme repeat domain-containing protein YP_002426649.1 1999089 R 243159 CDS YP_002426650.1 218666467 7134526 2000631..2001302 1 NC_011761.1 identified by match to protein family HMM TIGR01409; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 2001302 7134526 AFE_2252 Acidithiobacillus ferrooxidans ATCC 23270 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_002426650.1 2000631 D 243159 CDS YP_002426651.1 218667157 7136551 2001409..2006118 1 NC_011761.1 identified by similarity to GB:BAB48985.1; match to protein family HMM PF00515; match to protein family HMM PF01835; match to protein family HMM PF07703; hypothetical protein 2006118 7136551 AFE_2253 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426651.1 2001409 D 243159 CDS YP_002426652.1 218667740 7134705 2006126..2008192 1 NC_011761.1 identified by similarity to SP:P76577; match to protein family HMM PF00905; match to protein family HMM PF00912; penicillin-binding protein 1C 2008192 7134705 AFE_2254 Acidithiobacillus ferrooxidans ATCC 23270 penicillin-binding protein 1C YP_002426652.1 2006126 D 243159 CDS YP_002426653.1 218666293 7134414 complement(2008488..2008829) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2008829 7134414 AFE_2255 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426653.1 2008488 R 243159 CDS YP_002426654.1 218665042 7137301 complement(2008854..2009645) 1 NC_011761.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2009645 7137301 AFE_2256 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002426654.1 2008854 R 243159 CDS YP_002426655.1 218667757 7134971 complement(2009789..2010544) 1 NC_011761.1 hypothetical protein 2010544 7134971 AFE_2257 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426655.1 2009789 R 243159 CDS YP_002426656.1 218667447 7134432 complement(2010545..2011435) 1 NC_011761.1 identified by match to protein family HMM PF01925; hypothetical protein 2011435 7134432 AFE_2258 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426656.1 2010545 R 243159 CDS YP_002426657.1 218667256 7136737 complement(2011464..2011997) 1 NC_011761.1 identified by match to protein family HMM PF00582; universal stress family protein 2011997 7136737 AFE_2259 Acidithiobacillus ferrooxidans ATCC 23270 universal stress family protein YP_002426657.1 2011464 R 243159 CDS YP_002426658.1 218666571 7135650 2012238..2013812 1 NC_011761.1 identified by similarity to SP:P15639; match to protein family HMM PF01808; match to protein family HMM PF02142; match to protein family HMM TIGR00355; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2013812 purH 7135650 purH Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_002426658.1 2012238 D 243159 CDS YP_002426659.1 218667584 7135301 2013826..2015088 1 NC_011761.1 identified by similarity to SP:P15640; match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 2015088 purD 7135301 purD Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylamine--glycine ligase YP_002426659.1 2013826 D 243159 CDS YP_002426660.1 218666682 7135755 2015104..2015664 1 NC_011761.1 identified by match to protein family HMM PF01300; Sua5/YciO/YrdC family protein 2015664 7135755 AFE_2262 Acidithiobacillus ferrooxidans ATCC 23270 Sua5/YciO/YrdC family protein YP_002426660.1 2015104 D 243159 CDS YP_002426661.1 218666394 7134553 2015669..2016559 1 NC_011761.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2016559 hemF 7134553 hemF Acidithiobacillus ferrooxidans ATCC 23270 coproporphyrinogen III oxidase YP_002426661.1 2015669 D 243159 CDS YP_002426662.1 218665995 7134338 2016556..2017647 1 NC_011761.1 identified by similarity to SP:P05021; match to protein family HMM PF01180; match to protein family HMM TIGR01036; dihydroorotate dehydrogenase 2017647 pyrD 7134338 pyrD Acidithiobacillus ferrooxidans ATCC 23270 dihydroorotate dehydrogenase YP_002426662.1 2016556 D 243159 CDS YP_002426663.1 218665222 7134209 2017807..2017956 1 NC_011761.1 lipoprotein 2017956 7134209 AFE_2265 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426663.1 2017807 D 243159 CDS YP_002426664.1 218666335 7135710 2018240..2018821 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2018821 7135710 AFE_2266 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002426664.1 2018240 D 243159 CDS YP_002426665.1 218665318 7136474 complement(2018825..2020396) 1 NC_011761.1 identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409; phosphoesterase family protein 2020396 7136474 AFE_2267 Acidithiobacillus ferrooxidans ATCC 23270 phosphoesterase family protein YP_002426665.1 2018825 R 243159 CDS YP_002426666.1 218667735 7136259 complement(2020456..2021169) 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 2021169 7136259 AFE_2268 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002426666.1 2020456 R 243159 CDS YP_002426667.1 218666624 7135518 complement(2021191..2021592) 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 2021592 7135518 AFE_2269 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002426667.1 2021191 R 243159 CDS YP_002426668.1 218666202 7135664 complement(2021592..2022275) 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2022275 7135664 AFE_2270 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002426668.1 2021592 R 243159 CDS YP_002426669.1 218665722 7136558 complement(2022340..2023056) 1 NC_011761.1 identified by match to protein family HMM PF00486; transcriptional regulator 2023056 7136558 AFE_2271 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002426669.1 2022340 R 243159 CDS YP_002426670.1 218665257 7136037 complement(2023277..2023789) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2023789 7136037 AFE_2272 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426670.1 2023277 R 243159 CDS YP_002426671.1 218666160 7135746 2024266..2024958 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2024958 7135746 AFE_2273 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002426671.1 2024266 D 243159 CDS YP_002426672.1 218667534 7134060 2024992..2027880 1 NC_011761.1 identified by similarity to PIR:AG1979; match to protein family HMM PF01436; match to protein family HMM PF08450; hypothetical protein 2027880 7134060 AFE_2274 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426672.1 2024992 D 243159 CDS YP_002426673.1 218668076 7136400 2027955..2028683 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 2028683 7136400 AFE_2275 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002426673.1 2027955 D 243159 CDS YP_002426674.1 218665565 7136812 2028722..2029321 1 NC_011761.1 identified by similarity to PIR:D83296; match to protein family HMM TIGR03276; hypothetical protein 2029321 7136812 AFE_2276 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426674.1 2028722 D 243159 CDS YP_002426675.1 218667222 7135937 2029360..2030757 1 NC_011761.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 2030757 7135937 AFE_2277 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002426675.1 2029360 D 243159 CDS YP_002426676.1 218665756 7135616 2030857..2031333 1 NC_011761.1 identified by similarity to SP:P16685; match to protein family HMM TIGR03293; phosphonate metabolism protein PhnG 2031333 phnG 7135616 phnG Acidithiobacillus ferrooxidans ATCC 23270 phosphonate metabolism protein PhnG YP_002426676.1 2030857 D 243159 CDS YP_002426677.1 218668086 7136071 2031330..2031872 1 NC_011761.1 identified by similarity to SP:P16686; phosphonate metabolism protein phnH 2031872 phnH 7136071 phnH Acidithiobacillus ferrooxidans ATCC 23270 phosphonate metabolism protein phnH YP_002426677.1 2031330 D 243159 CDS YP_002426678.1 218665894 7136822 2031876..2032973 1 NC_011761.1 identified by similarity to SP:P16687; match to protein family HMM PF05861; phosphonate metabolism protein PhnI 2032973 phnI 7136822 phnI Acidithiobacillus ferrooxidans ATCC 23270 phosphonate metabolism protein PhnI YP_002426678.1 2031876 D 243159 CDS YP_002426679.1 218667683 7134104 2032970..2033794 1 NC_011761.1 identified by similarity to SP:P16688; match to protein family HMM PF06007; phosphonate metabolism protein PhnJ 2033794 phnJ 7134104 phnJ Acidithiobacillus ferrooxidans ATCC 23270 phosphonate metabolism protein PhnJ YP_002426679.1 2032970 D 243159 CDS YP_002426680.1 218667891 7135466 2033791..2034573 1 NC_011761.1 identified by similarity to SP:P16678; match to protein family HMM PF00005; match to protein family HMM TIGR02323; phosphonate C-P lyase system protein PhnK 2034573 phnK 7135466 phnK Acidithiobacillus ferrooxidans ATCC 23270 phosphonate C-P lyase system protein PhnK YP_002426680.1 2033791 D 243159 CDS YP_002426681.1 218666951 7135197 2034570..2035268 1 NC_011761.1 identified by similarity to SP:P16679; match to protein family HMM PF00005; match to protein family HMM TIGR02324; phosphonate ABC transporter ATP-binding protein PhnL 2035268 phnL 7135197 phnL Acidithiobacillus ferrooxidans ATCC 23270 phosphonate ABC transporter ATP-binding protein PhnL YP_002426681.1 2034570 D 243159 CDS YP_002426682.1 218665071 7134661 2035265..2036401 1 NC_011761.1 identified by similarity to SP:P16689; match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR02318; phnM protein 2036401 7134661 AFE_2284 Acidithiobacillus ferrooxidans ATCC 23270 phnM protein YP_002426682.1 2035265 D 243159 CDS YP_002426683.1 218667723 7135000 2036409..2037086 1 NC_011761.1 identified by similarity to GB:BAB51509.1; match to protein family HMM PF06299; match to protein family HMM TIGR03223; hypothetical protein 2037086 7135000 AFE_2285 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426683.1 2036409 D 243159 CDS YP_002426684.1 218667102 7135506 2037079..2037624 1 NC_011761.1 identified by similarity to SP:P16690; PhnN protein 2037624 7135506 AFE_2286 Acidithiobacillus ferrooxidans ATCC 23270 PhnN protein YP_002426684.1 2037079 D 243159 CDS YP_002426685.1 218666148 7136702 2037621..2038373 1 NC_011761.1 identified by match to protein family HMM PF00392; match to protein family HMM TIGR02325; GntR family transcriptional regulator 2038373 7136702 AFE_2287 Acidithiobacillus ferrooxidans ATCC 23270 GntR family transcriptional regulator YP_002426685.1 2037621 D 243159 CDS YP_002426686.1 218665677 7134048 complement(2038483..2040813) 1 NC_011761.1 identified by match to protein family HMM PF00593; TonB-dependent receptor 2040813 7134048 AFE_2288 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002426686.1 2038483 R 243159 CDS YP_002426687.1 218667233 7135689 2041035..2041256 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2041256 7135689 AFE_2290 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426687.1 2041035 D 243159 CDS YP_002426688.1 218665859 7135627 2041394..2041534 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2041534 7135627 AFE_2291 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426688.1 2041394 D 243159 CDS YP_002426689.1 218667074 7135414 complement(2041664..2043985) 1 NC_011761.1 identified by match to protein family HMM PF00593; TonB-dependent receptor 2043985 7135414 AFE_2292 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002426689.1 2041664 R 243159 CDS YP_002426690.1 218666596 7136674 complement(2044258..2044377) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2044377 7136674 AFE_2293 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426690.1 2044258 R 243159 CDS YP_002426691.1 218667419 7135762 2044926..2045183 1 NC_011761.1 identified by similarity to SP:Q8CSV0; hypothetical protein 2045183 7135762 AFE_2295 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426691.1 2044926 D 243159 CDS YP_002426692.1 218666526 7136943 2045521..2045832 1 NC_011761.1 identified by similarity to GB:CAD64331.1; hypothetical protein 2045832 7136943 AFE_2296 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426692.1 2045521 D 243159 CDS YP_002426693.1 218667927 7136338 2046144..2046842 1 NC_011761.1 identified by match to protein family HMM PF04185; match to protein family HMM TIGR01409; phosphoesterase family protein 2046842 7136338 AFE_2297 Acidithiobacillus ferrooxidans ATCC 23270 phosphoesterase family protein YP_002426693.1 2046144 D 243159 CDS YP_002426694.1 218665327 7135234 2046937..2049144 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 2049144 7135234 AFE_2298 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002426694.1 2046937 D 243159 CDS YP_002426695.1 218668040 7136268 2049200..2049877 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2049877 7136268 AFE_2299 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002426695.1 2049200 D 243159 CDS YP_002426696.1 218667131 7134805 2049895..2050269 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 2050269 7134805 AFE_2300 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002426696.1 2049895 D 243159 CDS YP_002426697.1 218665889 7134678 2050275..2051003 1 NC_011761.1 identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein 2051003 7134678 AFE_2301 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002426697.1 2050275 D 243159 CDS YP_002426698.1 218666361 7134099 2051024..2053240 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 2053240 7134099 AFE_2302 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002426698.1 2051024 D 243159 CDS YP_002426699.1 218665461 7136501 2053341..2056178 1 NC_011761.1 identified by similarity to PIR:AG1979; hypothetical protein 2056178 7136501 AFE_2303 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426699.1 2053341 D 243159 CDS YP_002426700.1 218666694 7135073 2056188..2056967 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 2056967 7135073 AFE_2304 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002426700.1 2056188 D 243159 CDS YP_002426701.1 218665809 7134565 2057004..2057399 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2057399 7134565 AFE_2305 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426701.1 2057004 D 243159 CDS YP_002426702.1 218665495 7135363 complement(2057410..2058177) 1 NC_011761.1 identified by match to protein family HMM PF00486; DNA-binding response regulator 2058177 7135363 AFE_2306 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002426702.1 2057410 R 243159 CDS YP_002426703.1 218668012 7135108 complement(2058288..2058494) 1 NC_011761.1 identified by similarity to GB:AAO90256.1; hypothetical protein 2058494 7135108 AFE_2307 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426703.1 2058288 R 243159 CDS YP_002426704.1 218667840 7134777 2058779..2058883 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2058883 7134777 AFE_2308 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426704.1 2058779 D 243159 CDS YP_002426705.1 218667052 7134918 complement(2058953..2060227) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2060227 7134918 AFE_2309 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426705.1 2058953 R 243159 CDS YP_002426706.1 218665421 7136652 2060307..2060588 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2060588 7136652 AFE_2311 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426706.1 2060307 D 243159 CDS YP_002426707.1 218665333 7136759 complement(2060969..2062327) 1 NC_011761.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; sugar transporter family protein 2062327 7136759 AFE_2312 Acidithiobacillus ferrooxidans ATCC 23270 sugar transporter family protein YP_002426707.1 2060969 R 243159 CDS YP_002426708.1 218666469 7136275 complement(2062633..2062989) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2062989 7136275 AFE_2313 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426708.1 2062633 R 243159 CDS YP_002426709.1 218665521 7136279 complement(2063000..2063482) 1 NC_011761.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR00249; phosphohistidine phosphatase SixA 2063482 sixA 7136279 sixA Acidithiobacillus ferrooxidans ATCC 23270 phosphohistidine phosphatase SixA YP_002426709.1 2063000 R 243159 CDS YP_002426710.1 218666434 7136021 complement(2063766..2064302) 1 NC_011761.1 identified by similarity to SP:P37194; match to protein family HMM PF03843; outer membrane lipoprotein Slp 2064302 7136021 AFE_2316 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane lipoprotein Slp YP_002426710.1 2063766 R 243159 CDS YP_002426711.1 218665774 7134380 complement(2064299..2064409) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2064409 7134380 AFE_2317 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426711.1 2064299 R 243159 CDS YP_002426712.1 218667716 7136089 complement(2064419..2065690) 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2065690 7136089 AFE_2318 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002426712.1 2064419 R 243159 CDS YP_002426713.1 218665227 7135499 complement(2065711..2066391) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2066391 7135499 AFE_2319 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002426713.1 2065711 R 243159 CDS YP_002426714.1 218665313 7135715 2066964..2067548 1 NC_011761.1 identified by similarity to SP:P39287; match to protein family HMM PF00929; oligoribonuclease Orn 2067548 orn 7135715 orn Acidithiobacillus ferrooxidans ATCC 23270 oligoribonuclease Orn YP_002426714.1 2066964 D 243159 CDS YP_002426715.1 218666643 7136254 2067695..2068783 1 NC_011761.1 identified by match to protein family HMM PF00296; monooxygenase, luciferase-like protein 2068783 7136254 AFE_2321 Acidithiobacillus ferrooxidans ATCC 23270 monooxygenase, luciferase-like protein YP_002426715.1 2067695 D 243159 CDS YP_002426716.1 218668063 7134514 2068789..2069745 1 NC_011761.1 identified by similarity to SP:Q11166; match to protein family HMM PF01073; match to protein family HMM PF01370; hypothetical protein 2069745 7134514 AFE_2322 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426716.1 2068789 D 243159 CDS YP_002426717.1 218666232 7136798 2069767..2070657 1 NC_011761.1 identified by similarity to PIR:T35630; hypothetical protein 2070657 7136798 AFE_2323 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426717.1 2069767 D 243159 CDS YP_002426718.1 218665434 7136589 2070717..2072348 1 NC_011761.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 2072348 7136589 AFE_2324 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglucomutase YP_002426718.1 2070717 D 243159 CDS YP_002426719.1 218666736 7135046 2072364..2072726 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2072726 7135046 AFE_2325 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426719.1 2072364 D 243159 CDS YP_002426720.1 218666241 7135853 2072856..2075399 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-translocating P-type ATPase 2075399 7135853 AFE_2327 Acidithiobacillus ferrooxidans ATCC 23270 magnesium-translocating P-type ATPase YP_002426720.1 2072856 D 243159 CDS YP_002426721.1 218667289 7136598 2075657..2076247 1 NC_011761.1 identified by similarity to SP:P75925; match to protein family HMM PF01292; cytochrome b561 family protein 2076247 7136598 AFE_2328 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome b561 family protein YP_002426721.1 2075657 D 243159 CDS YP_002426722.1 218666756 7135133 2076516..2076887 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2076887 7135133 AFE_2329 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426722.1 2076516 D 243159 CDS YP_002426723.1 218668072 7137251 2076987..2077781 1 NC_011761.1 identified by match to protein family HMM PF03988; hypothetical protein 2077781 7137251 AFE_2330 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426723.1 2076987 D 243159 CDS YP_002426724.1 218665122 7136808 2077902..2078003 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2078003 7136808 AFE_2331 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426724.1 2077902 D 243159 CDS YP_002426725.1 218666825 7134273 2078182..2079498 1 NC_011761.1 identified by match to protein family HMM PF07690; major facilitator family transporter 2079498 7134273 AFE_2333 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002426725.1 2078182 D 243159 CDS YP_002426726.1 218667631 7137074 complement(2079380..2080306) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2080306 7137074 AFE_2332 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002426726.1 2079380 R 243159 CDS YP_002426727.1 218665139 7135805 complement(2080435..2080641) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2080641 7135805 AFE_2334 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426727.1 2080435 R 243159 CDS YP_002426728.1 218665974 7135868 complement(2080861..2082735) 1 NC_011761.1 identified by similarity to SP:P00579; match to protein family HMM PF00140; match to protein family HMM PF03979; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04546; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 2082735 rpoD 7135868 rpoD Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigma factor RpoD YP_002426728.1 2080861 R 243159 CDS YP_002426729.1 218668044 7134188 complement(2082858..2084609) 1 NC_011761.1 identified by similarity to SP:O33470; match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase 2084609 dnaG 7134188 dnaG Acidithiobacillus ferrooxidans ATCC 23270 DNA primase YP_002426729.1 2082858 R 243159 CDS YP_002426730.1 218665746 7134809 complement(2084613..2086937) 1 NC_011761.1 identified by match to protein family HMM PF00488; match to protein family HMM PF01713; MutS2 family protein 2086937 7134809 AFE_2338 Acidithiobacillus ferrooxidans ATCC 23270 MutS2 family protein YP_002426730.1 2084613 R 243159 CDS YP_002426731.1 218667056 7136061 complement(2086949..2087395) 1 NC_011761.1 identified by match to protein family HMM PF02637; GatB/Yqey domain-containing protein 2087395 7136061 AFE_2339 Acidithiobacillus ferrooxidans ATCC 23270 GatB/Yqey domain-containing protein YP_002426731.1 2086949 R 243159 CDS YP_002426732.1 218668051 7136656 complement(2087395..2087610) 1 NC_011761.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 2087610 rpsU 7136656 rpsU Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S21 YP_002426732.1 2087395 R 243159 CDS YP_002426733.1 218665176 7134816 2087899..2088756 1 NC_011761.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; RNA polymerase sigm-70 factor family 2088756 7134816 AFE_2342 Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigm-70 factor family YP_002426733.1 2087899 D 243159 CDS YP_002426734.1 218666941 7134328 complement(2088723..2089346) 1 NC_011761.1 identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 2089346 rdgB 7134328 rdgB Acidithiobacillus ferrooxidans ATCC 23270 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_002426734.1 2088723 R 243159 CDS YP_002426735.1 218667606 7134651 complement(2089343..2090071) 1 NC_011761.1 identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966; ribonuclease PH 2090071 rph 7134651 rph Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease PH YP_002426735.1 2089343 R 243159 CDS YP_002426736.1 218666185 7135780 2090211..2090705 1 NC_011761.1 identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 2090705 7135780 AFE_2344 Acidithiobacillus ferrooxidans ATCC 23270 cyclic nucleotide-binding domain-containing protein YP_002426736.1 2090211 D 243159 CDS YP_002426737.1 218666914 7134086 complement(2090732..2091289) 1 NC_011761.1 identified by similarity to GB:AAN70383.1; match to protein family HMM PF02190; ATP-dependent protease La domain-containing protein 2091289 7134086 AFE_2345 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent protease La domain-containing protein YP_002426737.1 2090732 R 243159 CDS YP_002426738.1 218667160 7134624 2091314..2092471 1 NC_011761.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase 2092471 7134624 AFE_2346 Acidithiobacillus ferrooxidans ATCC 23270 oxygen-independent coproporphyrinogen III oxidase YP_002426738.1 2091314 D 243159 CDS YP_002426739.1 218666475 7134708 complement(2092486..2092797) 1 NC_011761.1 identified by similarity to GB:AAO90176.1; hypothetical protein 2092797 7134708 AFE_2347 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426739.1 2092486 R 243159 CDS YP_002426740.1 218667427 7136285 2092821..2093615 1 NC_011761.1 identified by similarity to SP:P37765; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; RNA pseudouridine synthase family protein 2093615 7136285 AFE_2348 Acidithiobacillus ferrooxidans ATCC 23270 RNA pseudouridine synthase family protein YP_002426740.1 2092821 D 243159 CDS YP_002426741.1 218665752 7136951 2093965..2095650 1 NC_011761.1 identified by similarity to SP:P27304; match to protein family HMM PF07690; match to protein family HMM TIGR00711; multidrug resistance protein 2095650 7136951 AFE_2349 Acidithiobacillus ferrooxidans ATCC 23270 multidrug resistance protein YP_002426741.1 2093965 D 243159 CDS YP_002426742.1 218666016 7136067 complement(2095660..2096631) 1 NC_011761.1 identified by similarity to SP:P08506; match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2096631 7136067 AFE_2350 Acidithiobacillus ferrooxidans ATCC 23270 D-alanyl-D-alanine carboxypeptidase YP_002426742.1 2095660 R 243159 CDS YP_002426743.1 218667789 7134232 2096781..2097542 1 NC_011761.1 identified by match to protein family HMM PF01925; hypothetical protein 2097542 7134232 AFE_2351 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426743.1 2096781 D 243159 CDS YP_002426744.1 218666095 7134464 2097558..2098565 1 NC_011761.1 identified by similarity to GB:BAC47910.1; match to protein family HMM PF00891; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 2098565 7134464 AFE_2352 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426744.1 2097558 D 243159 CDS YP_002426745.1 218666829 7135831 complement(2098914..2102765) 1 NC_011761.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 2102765 purL 7135831 purL Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylformylglycinamidine synthase YP_002426745.1 2098914 R 243159 CDS YP_002426746.1 218665512 7137078 complement(2102836..2103558) 1 NC_011761.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole succinocarboxamide synthase 2103558 purC 7137078 purC Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosylaminoimidazole succinocarboxamide synthase YP_002426746.1 2102836 R 243159 CDS YP_002426747.1 218667360 7135883 complement(2103555..2104862) 1 NC_011761.1 identified by similarity to SP:P12047; match to protein family HMM PF00206; match to protein family HMM TIGR00928; adenylosuccinate lyase 2104862 purB 7135883 purB Acidithiobacillus ferrooxidans ATCC 23270 adenylosuccinate lyase YP_002426747.1 2103555 R 243159 CDS YP_002426748.1 218665583 7136882 complement(2104859..2105992) 1 NC_011761.1 lipoprotein 2105992 7136882 AFE_2357 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426748.1 2104859 R 243159 CDS YP_002426749.1 218665345 7135524 complement(2106030..2106905) 1 NC_011761.1 identified by similarity to SP:P05640; match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase 2106905 dapA 7135524 dapA Acidithiobacillus ferrooxidans ATCC 23270 dihydrodipicolinate synthase YP_002426749.1 2106030 R 243159 CDS YP_002426750.1 218666490 7136026 complement(2107178..2107831) 1 NC_011761.1 identified by similarity to SP:P54176; match to protein family HMM PF03006; match to protein family HMM TIGR01065; hemolysin III family channel protein 2107831 7136026 AFE_2360 Acidithiobacillus ferrooxidans ATCC 23270 hemolysin III family channel protein YP_002426750.1 2107178 R 243159 CDS YP_002426751.1 218665609 7136300 complement(2107906..2109234) 1 NC_011761.1 identified by similarity to SP:Q46929; match to protein family HMM PF01476; match to protein family HMM PF01520; match to protein family HMM TIGR01409; N-acetylmuramoyl-L-alanine amidase 2109234 7136300 AFE_2361 Acidithiobacillus ferrooxidans ATCC 23270 N-acetylmuramoyl-L-alanine amidase YP_002426751.1 2107906 R 243159 CDS YP_002426752.1 218668168 7135552 complement(2109320..2109754) 1 NC_011761.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 2109754 7135552 AFE_2362 Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin YP_002426752.1 2109320 R 243159 CDS YP_002426753.1 218666858 7135987 complement(2109785..2110069) 1 NC_011761.1 identified by similarity to SP:P37687; match to protein family HMM PF00462; match to protein family HMM TIGR02181; glutaredoxin 3 2110069 grxC 7135987 grxC Acidithiobacillus ferrooxidans ATCC 23270 glutaredoxin 3 YP_002426753.1 2109785 R 243159 CDS YP_002426754.1 218667657 7137107 complement(2110069..2110494) 1 NC_011761.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 2110494 7137107 AFE_2364 Acidithiobacillus ferrooxidans ATCC 23270 rhodanese-like domain-containing protein YP_002426754.1 2110069 R 243159 CDS YP_002426755.1 218666613 7135440 complement(2110498..2110719) 1 NC_011761.1 identified by similarity to GB:AAN56110.1; hypothetical protein 2110719 7135440 AFE_2365 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426755.1 2110498 R 243159 CDS YP_002426756.1 218666101 7135344 complement(2110726..2114004) 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 2114004 7135344 AFE_2366 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002426756.1 2110726 R 243159 CDS YP_002426757.1 218665407 7137022 complement(2113997..2115079) 1 NC_011761.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 2115079 7137022 AFE_2367 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426757.1 2113997 R 243159 CDS YP_002426758.1 218666722 7136189 complement(2115076..2116497) 1 NC_011761.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 2116497 7136189 AFE_2368 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane efflux protein YP_002426758.1 2115076 R 243159 CDS YP_002426759.1 218666667 7137217 complement(2116745..2117047) 1 NC_011761.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 2117047 7137217 AFE_2369 Acidithiobacillus ferrooxidans ATCC 23270 ArsR family transcriptional regulator YP_002426759.1 2116745 R 243159 CDS YP_002426760.1 218666170 7135843 complement(2117462..2117701) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2117701 7135843 AFE_2371 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426760.1 2117462 R 243159 CDS YP_002426761.1 218665706 7134070 complement(2117769..2119382) 1 NC_011761.1 identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system, M subunit 2119382 7134070 AFE_2372 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, M subunit YP_002426761.1 2117769 R 243159 CDS YP_002426762.1 218667066 7137189 complement(2119379..2119582) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2119582 7137189 AFE_2373 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426762.1 2119379 R 243159 CDS YP_002426763.1 218666347 7136666 complement(2119579..2120757) 1 NC_011761.1 identified by similarity to SP:P17223; anticodon nuclease 2120757 7136666 AFE_2374 Acidithiobacillus ferrooxidans ATCC 23270 anticodon nuclease YP_002426763.1 2119579 R 243159 CDS YP_002426764.1 218667858 7136486 2120710..2120871 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2120871 7136486 AFE_2376 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426764.1 2120710 D 243159 CDS YP_002426765.1 218666117 7134936 complement(2120849..2124013) 1 NC_011761.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; ATP-dependent helicase, DEAD/DEAH box family 2124013 7134936 AFE_2375 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent helicase, DEAD/DEAH box family YP_002426765.1 2120849 R 243159 CDS YP_002426766.1 218665403 7134016 complement(2124010..2124798) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2124798 7134016 AFE_2377 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426766.1 2124010 R 243159 CDS YP_002426767.1 218667989 7136185 complement(2124795..2125946) 1 NC_011761.1 identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 2125946 7136185 AFE_2378 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system subunit S YP_002426767.1 2124795 R 243159 CDS YP_002426768.1 218667675 7134753 2126024..2126221 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2126221 7134753 AFE_2379 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426768.1 2126024 D 243159 CDS YP_002426769.1 218667090 7135458 complement(2126416..2127030) 1 NC_011761.1 identified by similarity to GB:AAO78433.1; hypothetical protein 2127030 7135458 AFE_2380 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426769.1 2126416 R 243159 CDS YP_002426770.1 218667282 7136690 complement(2127023..2130121) 1 NC_011761.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction-modification system, R subunit 2130121 7136690 AFE_2381 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, R subunit YP_002426770.1 2127023 R 243159 CDS YP_002426771.1 218666309 7135126 2130200..2130337 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2130337 7135126 AFE_2382 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426771.1 2130200 D 243159 CDS YP_002426772.1 218667225 7136447 complement(2130414..2131886) 1 NC_011761.1 identified by similarity to SP:P26615; match to protein family HMM PF01977; match to protein family HMM TIGR00148; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2131886 ubiD 7136447 ubiD Acidithiobacillus ferrooxidans ATCC 23270 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_002426772.1 2130414 R 243159 CDS YP_002426773.1 218667423 7135619 complement(2131911..2132783) 1 NC_011761.1 identified by similarity to PIR:A82245; hypothetical protein 2132783 7135619 AFE_2384 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426773.1 2131911 R 243159 CDS YP_002426774.1 218665596 7136947 complement(2132796..2133239) 1 NC_011761.1 identified by match to protein family HMM PF02036; SCP-2 sterol transfer family protein 2133239 7136947 AFE_2385 Acidithiobacillus ferrooxidans ATCC 23270 SCP-2 sterol transfer family protein YP_002426774.1 2132796 R 243159 CDS YP_002426775.1 218667151 7135539 complement(2133299..2134045) 1 NC_011761.1 identified by match to protein family HMM PF00899; HesA/MoeB/ThiF family protein 2134045 7135539 AFE_2386 Acidithiobacillus ferrooxidans ATCC 23270 HesA/MoeB/ThiF family protein YP_002426775.1 2133299 R 243159 CDS YP_002426776.1 218667200 7134699 complement(2134045..2134815) 1 NC_011761.1 identified by match to protein family HMM PF01026; TatD family hydrolase 2134815 7134699 AFE_2387 Acidithiobacillus ferrooxidans ATCC 23270 TatD family hydrolase YP_002426776.1 2134045 R 243159 CDS YP_002426777.1 218665597 7135594 2134993..2136222 1 NC_011761.1 identified by similarity to SP:P25534; match to protein family HMM PF01494; match to protein family HMM TIGR01988; 2-octaprenyl-6-methoxyphenol hydroxylase 2136222 ubiH-2 7135594 ubiH-2 Acidithiobacillus ferrooxidans ATCC 23270 2-octaprenyl-6-methoxyphenol hydroxylase YP_002426777.1 2134993 D 243159 CDS YP_002426778.1 218665358 7135540 2136212..2137399 1 NC_011761.1 identified by similarity to SP:P25534; match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM TIGR01988; 2-octaprenyl-6-methoxyphenol hydroxylase 2137399 ubiH-1 7135540 ubiH-1 Acidithiobacillus ferrooxidans ATCC 23270 2-octaprenyl-6-methoxyphenol hydroxylase YP_002426778.1 2136212 D 243159 CDS YP_002426779.1 218667826 7136140 2137411..2137674 1 NC_011761.1 identified by similarity to GB:AAQ61663.1; hypothetical protein 2137674 7136140 AFE_2390 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426779.1 2137411 D 243159 CDS YP_002426780.1 218665768 7134675 2138641..2140485 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2140485 7134675 AFE_2392 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426780.1 2138641 D 243159 CDS YP_002426781.1 218666763 7136083 2140693..2141148 1 NC_011761.1 identified by similarity to GB:AAB81643.1; ISAfe5, transposase orfA 2141148 7136083 AFE_2393 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe5, transposase orfA YP_002426781.1 2140693 D 243159 CDS YP_002426782.1 218666008 7137259 2141283..2141633 1 NC_011761.1 identified by similarity to GB:AAB81642.1; ISAfe5, transposase orfB 2141633 7137259 AFE_2394 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe5, transposase orfB YP_002426782.1 2141283 D 243159 CDS YP_002426783.1 218666769 7136274 complement(2143755..2143934) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2143934 7136274 AFE_2396 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426783.1 2143755 R 243159 CDS YP_002426784.1 218666076 7137265 2144157..2145401 1 NC_011761.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific recombinase, phage integrase family 2145401 7137265 AFE_2397 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002426784.1 2144157 D 243159 CDS YP_002426785.1 218665325 7136996 2145398..2146339 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 2146339 7136996 AFE_2398 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002426785.1 2145398 D 243159 CDS YP_002426786.1 218667875 7136266 2146332..2147330 1 NC_011761.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 2147330 7136266 AFE_2399 Acidithiobacillus ferrooxidans ATCC 23270 site-specific recombinase, phage integrase family YP_002426786.1 2146332 D 243159 CDS YP_002426787.1 218667134 7136534 complement(2147405..2148265) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2148265 7136534 AFE_2400 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426787.1 2147405 R 243159 CDS YP_002426788.1 218667864 7134681 complement(2148399..2148947) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2148947 7134681 AFE_2401 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426788.1 2148399 R 243159 CDS YP_002426789.1 218666798 7134942 2148975..2149082 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2149082 7134942 AFE_2402 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426789.1 2148975 D 243159 CDS YP_002426790.1 218666138 7134178 2150798..2151298 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2151298 7134178 AFE_2405 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426790.1 2150798 D 243159 CDS YP_002426791.1 218667343 7134038 complement(2151591..2151965) 1 NC_011761.1 identified by similarity to SP:P37246; transposase, degenerate 2151965 7134038 AFE_2404 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002426791.1 2151591 R 243159 CDS YP_002426792.1 218668054 7135188 complement(2152275..2152379) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2152379 7135188 AFE_2406 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426792.1 2152275 R 243159 CDS YP_002426793.1 218665511 7136789 2152967..2154262 1 NC_011761.1 identified by similarity to GB:AAN30751.1; hypothetical protein 2154262 7136789 AFE_2407 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426793.1 2152967 D 243159 CDS YP_002426794.1 218666353 7135882 2154272..2156701 1 NC_011761.1 identified by match to protein family HMM PF00270; match to protein family HMM PF01896; match to protein family HMM PF04851; DEAD/DEAH box helicase 2156701 7135882 AFE_2408 Acidithiobacillus ferrooxidans ATCC 23270 DEAD/DEAH box helicase YP_002426794.1 2154272 D 243159 CDS YP_002426795.1 218666980 7136492 complement(2156858..2157097) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2157097 7136492 AFE_2409 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426795.1 2156858 R 243159 CDS YP_002426796.1 218667132 7134843 complement(2157238..2157735) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2157735 7134843 AFE_2410 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002426796.1 2157238 R 243159 CDS YP_002426797.1 218667459 7134679 complement(2157957..2158433) 1 NC_011761.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2158433 7134679 AFE_2411 Acidithiobacillus ferrooxidans ATCC 23270 NADH dehydrogenase subunit B YP_002426797.1 2157957 R 243159 CDS YP_002426798.1 218665412 7136750 complement(2158510..2160636) 1 NC_011761.1 identified by match to protein family HMM PF00391; phosphoenolpyruvate-utilizing mobile domain-containing protein 2160636 7136750 AFE_2412 Acidithiobacillus ferrooxidans ATCC 23270 phosphoenolpyruvate-utilizing mobile domain-containing protein YP_002426798.1 2158510 R 243159 CDS YP_002426799.1 218665997 7136194 complement(2160776..2161438) 1 NC_011761.1 identified by match to protein family HMM PF01695; transposase, degenerate 2161438 7136194 AFE_2413 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002426799.1 2160776 R 243159 CDS YP_002426800.1 218666978 7134212 2161717..2161998 1 NC_011761.1 identified by similarity to GB:AAN70104.1; match to protein family HMM PF04365; hypothetical protein 2161998 7134212 AFE_2414 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426800.1 2161717 D 243159 CDS YP_002426801.1 218666500 7134841 2161995..2162237 1 NC_011761.1 identified by similarity to GB:AAO89577.1; hypothetical protein 2162237 7134841 AFE_2415 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426801.1 2161995 D 243159 CDS YP_002426802.1 218667480 7136312 2163160..2163294 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2163294 7136312 AFE_2416 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426802.1 2163160 D 243159 CDS YP_002426803.1 218666961 7136772 2163294..2164091 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2164091 7136772 AFE_2417 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426803.1 2163294 D 243159 CDS YP_002426804.1 218666738 7134824 2164442..2164576 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2164576 7134824 AFE_2418 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426804.1 2164442 D 243159 CDS YP_002426805.1 218665718 7137233 complement(2164763..2166238) 1 NC_011761.1 identified by match to protein family HMM PF01076; plasmid recombination enzyme 2166238 7137233 AFE_2419 Acidithiobacillus ferrooxidans ATCC 23270 plasmid recombination enzyme YP_002426805.1 2164763 R 243159 CDS YP_002426806.1 218667087 7137201 complement(2166470..2167471) 1 NC_011761.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter 2167471 7137201 AFE_2420 Acidithiobacillus ferrooxidans ATCC 23270 cation diffusion facilitator family transporter YP_002426806.1 2166470 R 243159 CDS YP_002426807.1 218667807 7136687 2167571..2168047 1 NC_011761.1 identified by match to protein family HMM PF00376; match to protein family HMM PF09278; match to protein family HMM TIGR02047; Cd(II)/Pb(II)-responsive transcriptional regulator 2168047 7136687 AFE_2421 Acidithiobacillus ferrooxidans ATCC 23270 Cd(II)/Pb(II)-responsive transcriptional regulator YP_002426807.1 2167571 D 243159 CDS YP_002426808.1 218666962 7134482 complement(2168060..2168644) 1 NC_011761.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 2168644 7134482 AFE_2422 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426808.1 2168060 R 243159 CDS YP_002426809.1 218665866 7134825 complement(2168727..2169218) 1 NC_011761.1 identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 2169218 7134825 AFE_2423 Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F1 subunit epsilon YP_002426809.1 2168727 R 243159 CDS YP_002426810.1 218665275 7135421 complement(2169343..2169969) 1 NC_011761.1 identified by match to protein family HMM PF01545; cation efflux permease 2169969 7135421 AFE_2424 Acidithiobacillus ferrooxidans ATCC 23270 cation efflux permease YP_002426810.1 2169343 R 243159 CDS YP_002426811.1 218667692 7136216 2170031..2170357 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2170357 7136216 AFE_2425 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426811.1 2170031 D 243159 CDS YP_002426812.1 218666746 7135475 complement(2170506..2170607) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2170607 7135475 AFE_2426 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426812.1 2170506 R 243159 CDS YP_002426813.1 218667264 7137241 complement(2170663..2170827) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2170827 7137241 AFE_2427 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426813.1 2170663 R 243159 CDS YP_002426814.1 218667101 7135659 complement(2170930..2171292) 1 NC_011761.1 identified by similarity to SP:P77214; heavy metal efflux system protein 2171292 7135659 AFE_2428 Acidithiobacillus ferrooxidans ATCC 23270 heavy metal efflux system protein YP_002426814.1 2170930 R 243159 CDS YP_002426815.1 218666031 7136701 complement(2171421..2172176) 1 NC_011761.1 identified by match to protein family HMM PF01292; [Ni/Fe] hydrogenase, b-type cytochrome subunit 2172176 7136701 AFE_2429 Acidithiobacillus ferrooxidans ATCC 23270 [Ni/Fe] hydrogenase, b-type cytochrome subunit YP_002426815.1 2171421 R 243159 CDS YP_002426816.1 218666873 7134247 complement(2172235..2172921) 1 NC_011761.1 identified by similarity to GB:BAB47830.1; match to protein family HMM PF01987; hypothetical protein 2172921 7134247 AFE_2430 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426816.1 2172235 R 243159 CDS YP_002426817.1 218665832 7134583 complement(2172992..2176105) 1 NC_011761.1 identified by match to protein family HMM PF00873; match to protein family HMM TIGR00914; CzcA family heavy metal efflux pump 2176105 7134583 AFE_2431 Acidithiobacillus ferrooxidans ATCC 23270 CzcA family heavy metal efflux pump YP_002426817.1 2172992 R 243159 CDS YP_002426818.1 218665163 7135386 2176350..2177576 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 2177576 7135386 AFE_2432 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002426818.1 2176350 D 243159 CDS YP_002426819.1 218665574 7134315 complement(2177651..2179099) 1 NC_011761.1 identified by match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 2179099 7134315 AFE_2433 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002426819.1 2177651 R 243159 CDS YP_002426820.1 218666932 7135946 complement(2179096..2180397) 1 NC_011761.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 2180397 7135946 AFE_2434 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane efflux protein YP_002426820.1 2179096 R 243159 CDS YP_002426821.1 218667846 7134642 complement(2180499..2180849) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2180849 7134642 AFE_2435 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426821.1 2180499 R 243159 CDS YP_002426822.1 218667517 7134924 complement(2180921..2181112) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2181112 7134924 AFE_2436 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426822.1 2180921 R 243159 CDS YP_002426823.1 218667313 7136382 2181098..2181352 1 NC_011761.1 identified by similarity to GB:AAN70930.1; cyclopropane-fatty-acyl-phospholipid synthase 2181352 7136382 AFE_2437 Acidithiobacillus ferrooxidans ATCC 23270 cyclopropane-fatty-acyl-phospholipid synthase YP_002426823.1 2181098 D 243159 CDS YP_002426824.1 218665541 7135157 2181531..2181815 1 NC_011761.1 identified by similarity to GB:AAM25602.1; hypothetical protein 2181815 7135157 AFE_2438 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426824.1 2181531 D 243159 CDS YP_002426825.1 218666014 7135913 2181955..2183979 1 NC_011761.1 identified by similarity to SP:P05425; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 2183979 7135913 AFE_2439 Acidithiobacillus ferrooxidans ATCC 23270 copper-translocating P-type ATPase YP_002426825.1 2181955 D 243159 CDS YP_002426826.1 218667901 7136927 complement(2184471..2184572) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2184572 7136927 AFE_2441 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426826.1 2184471 R 243159 CDS YP_002426827.1 218666496 7135208 complement(2184586..2184894) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2184894 7135208 AFE_2442 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426827.1 2184586 R 243159 CDS YP_002426828.1 218667435 7136308 complement(2185209..2185523) 1 NC_011761.1 transposase, degenerate 2185523 7136308 AFE_2443 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002426828.1 2185209 R 243159 CDS YP_002426829.1 218666575 7136724 2185425..2185814 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2185814 7136724 AFE_2444 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426829.1 2185425 D 243159 CDS YP_002426830.1 218666057 7135305 2185790..2186071 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2186071 7135305 AFE_2445 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426830.1 2185790 D 243159 CDS YP_002426831.1 218667515 7134024 2187708..2188103 1 NC_011761.1 identified by similarity to GB:AAO07819.1; match to protein family HMM PF03625; hypothetical protein 2188103 7134024 AFE_2447 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426831.1 2187708 D 243159 CDS YP_002426832.1 218666523 7136380 2188165..2188371 1 NC_011761.1 identified by match to protein family HMM PF00403; heavy metal-binding protein 2188371 7136380 AFE_2448 Acidithiobacillus ferrooxidans ATCC 23270 heavy metal-binding protein YP_002426832.1 2188165 D 243159 CDS YP_002426833.1 218667942 7136335 2188376..2188615 1 NC_011761.1 identified by similarity to PIR:B75601; match to protein family HMM PF00462; match to protein family HMM PF05768; hypothetical protein 2188615 7136335 AFE_2449 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426833.1 2188376 D 243159 CDS YP_002426834.1 218667053 7135249 2188760..2189062 1 NC_011761.1 identified by match to protein family HMM PF00034; cytochrome c family protein 2189062 7135249 AFE_2450 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c family protein YP_002426834.1 2188760 D 243159 CDS YP_002426835.1 218665459 7136653 2189108..2189254 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2189254 7136653 AFE_2452 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426835.1 2189108 D 243159 CDS YP_002426836.1 218667913 7135071 complement(2189251..2189424) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2189424 7135071 AFE_2451 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426836.1 2189251 R 243159 CDS YP_002426837.1 218665091 7135175 complement(2190384..2191985) 1 NC_011761.1 identified by match to protein family HMM PF00999; match to protein family HMM TIGR00831; Na+/H+ antiporter 2191985 7135175 AFE_2454 Acidithiobacillus ferrooxidans ATCC 23270 Na+/H+ antiporter YP_002426837.1 2190384 R 243159 CDS YP_002426838.1 218667733 7135021 complement(2192106..2192372) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2192372 7135021 AFE_2455 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426838.1 2192106 R 243159 CDS YP_002426839.1 218666871 7135516 complement(2192726..2192824) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2192824 7135516 AFE_2456 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426839.1 2192726 R 243159 CDS YP_002426840.1 218666989 7134579 complement(2193131..2194750) 1 NC_011761.1 identified by match to protein family HMM PF00324; amino acid permease family protein 2194750 7134579 AFE_2457 Acidithiobacillus ferrooxidans ATCC 23270 amino acid permease family protein YP_002426840.1 2193131 R 243159 CDS YP_002426841.1 218666439 7134852 complement(2194775..2195188) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2195188 7134852 AFE_2458 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426841.1 2194775 R 243159 CDS YP_002426842.1 218665736 7134385 2195178..2195324 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2195324 7134385 AFE_2460 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426842.1 2195178 D 243159 CDS YP_002426843.1 218666175 7136051 complement(2195260..2195619) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2195619 7136051 AFE_2459 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426843.1 2195260 R 243159 CDS YP_002426844.1 218666860 7134076 complement(2195678..2195977) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2195977 7134076 AFE_2461 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426844.1 2195678 R 243159 CDS YP_002426845.1 218667762 7137109 complement(2195974..2196345) 1 NC_011761.1 identified by similarity to SP:P05826; match to protein family HMM PF00543; nitrogen regulatory protein P-II 1 2196345 glnB-1 7137109 glnB-1 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulatory protein P-II 1 YP_002426845.1 2195974 R 243159 CDS YP_002426846.1 218665711 7134437 complement(2196403..2197593) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2197593 7134437 AFE_2463 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426846.1 2196403 R 243159 CDS YP_002426847.1 218666512 7137194 complement(2197673..2198641) 1 NC_011761.1 identified by similarity to SP:P07005; match to protein family HMM PF00696; match to protein family HMM TIGR01027; glutamate 5-kinase 2198641 proB-1 7137194 proB-1 Acidithiobacillus ferrooxidans ATCC 23270 glutamate 5-kinase YP_002426847.1 2197673 R 243159 CDS YP_002426848.1 218667127 7136324 complement(2198706..2198888) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2198888 7136324 AFE_2465 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426848.1 2198706 R 243159 CDS YP_002426849.1 218665151 7134673 complement(2198825..2200381) 1 NC_011761.1 identified by match to protein family HMM PF08443; hypothetical protein 2200381 7134673 AFE_2466 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426849.1 2198825 R 243159 CDS YP_002426850.1 218668005 7134303 complement(2200415..2200744) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2200744 7134303 AFE_2467 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002426850.1 2200415 R 243159 CDS YP_002426851.1 218666340 7134769 2200795..2201127 1 NC_011761.1 Assignment based on BLAST search at the ISFinder database, and proximity to other transposase ORFs.; ISAfe4, transposase orf1 2201127 7134769 AFE_2468 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf1 YP_002426851.1 2200795 D 243159 CDS YP_002426852.1 218665470 7136479 2201118..2201465 1 NC_011761.1 identified by match to protein family HMM PF05717; ISAfe4, transposase orf2 2201465 7136479 AFE_2469 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf2 YP_002426852.1 2201118 D 243159 CDS YP_002426853.1 218667107 7135083 2201515..2203152 1 NC_011761.1 identified by match to protein family HMM PF03050; ISAfe4, transposase orf3 2203152 7135083 AFE_2470 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf3 YP_002426853.1 2201515 D 243159 CDS YP_002426854.1 218666551 7136707 complement(2203665..2204243) 1 NC_011761.1 identified by match to protein family HMM PF00216; DNA-binding protein HU family protein 2204243 7136707 AFE_2471 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding protein HU family protein YP_002426854.1 2203665 R 243159 CDS YP_002426855.1 218667341 7135281 complement(2204258..2204776) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2204776 7135281 AFE_2472 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426855.1 2204258 R 243159 CDS YP_002426856.1 218668105 7135186 complement(2204733..2205356) 1 NC_011761.1 identified by similarity to SP:P03961; match to protein family HMM PF02669; match to protein family HMM TIGR00681; K+-transporting ATPase subunit C 2205356 kdpC-1 7135186 kdpC-1 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit C YP_002426856.1 2204733 R 243159 CDS YP_002426857.1 218666883 7136841 complement(2205369..2207438) 1 NC_011761.1 identified by similarity to SP:P03960; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01497; K+-transporting ATPase subunit B 2207438 kdpB-1 7136841 kdpB-1 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit B YP_002426857.1 2205369 R 243159 CDS YP_002426858.1 218665945 7134593 complement(2207452..2209203) 1 NC_011761.1 identified by similarity to SP:P03959; match to protein family HMM PF03814; match to protein family HMM TIGR00680; K+-transporting ATPase, A subunit 2209203 kdpA-2 7134593 kdpA-2 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase, A subunit YP_002426858.1 2207452 R 243159 CDS YP_002426859.1 218667797 7134155 complement(2209200..2209292) 1 NC_011761.1 identified by match to protein family HMM TIGR02115; K+-transporting ATPase subunit F 2209292 kdpF-1 7134155 kdpF-1 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase subunit F YP_002426859.1 2209200 R 243159 CDS YP_002426860.1 218667298 7134472 complement(2209589..2211340) 1 NC_011761.1 identified by similarity to SP:P03959; match to protein family HMM PF03814; match to protein family HMM TIGR00680; K+-transporting ATPase, A subunit 2211340 kdpA-1 7134472 kdpA-1 Acidithiobacillus ferrooxidans ATCC 23270 K+-transporting ATPase, A subunit YP_002426860.1 2209589 R 243159 CDS YP_002426861.1 218666532 7135142 complement(2211614..2211784) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2211784 7135142 AFE_2478 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426861.1 2211614 R 243159 CDS YP_002426862.1 218667307 7135529 2212065..2212499 1 NC_011761.1 identified by similarity to SP:P22905; match to protein family HMM PF03203; mercury transport protein MerC 2212499 merC 7135529 merC Acidithiobacillus ferrooxidans ATCC 23270 mercury transport protein MerC YP_002426862.1 2212065 D 243159 CDS YP_002426863.1 218665884 7135151 2212525..2214168 1 NC_011761.1 identified by similarity to SP:P17239; match to protein family HMM PF00070; match to protein family HMM PF00403; match to protein family HMM PF01266; match to protein family HMM PF02852; match to protein family HMM PF07992; match to protein family HMM TIGR02053; mercuric reductase 2214168 merA 7135151 merA Acidithiobacillus ferrooxidans ATCC 23270 mercuric reductase YP_002426863.1 2212525 D 243159 CDS YP_002426864.1 218665170 7135439 2214225..2216270 1 NC_011761.1 identified by match to protein family HMM PF00723; match to protein family HMM PF09137; glucan 1,4-alpha-glucosidase 2216270 cga 7135439 cga Acidithiobacillus ferrooxidans ATCC 23270 glucan 1,4-alpha-glucosidase YP_002426864.1 2214225 D 243159 CDS YP_002426865.1 218666071 7134431 2216995..2217240 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2217240 7134431 AFE_2484 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426865.1 2216995 D 243159 CDS YP_002426866.1 218667037 7136991 2217265..2217444 1 NC_011761.1 transposase, degenerate 2217444 7136991 AFE_2485 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002426866.1 2217265 D 243159 CDS YP_002426867.1 218665710 7136637 complement(2217632..2218063) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2218063 7136637 AFE_2486 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426867.1 2217632 R 243159 CDS YP_002426868.1 218667040 7137193 complement(2218065..2218391) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2218391 7137193 AFE_2487 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426868.1 2218065 R 243159 CDS YP_002426869.1 218665741 7136640 complement(2218391..2218672) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2218672 7136640 AFE_2488 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426869.1 2218391 R 243159 CDS YP_002426870.1 218666701 7136056 2218923..2219186 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2219186 7136056 AFE_2489 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426870.1 2218923 D 243159 CDS YP_002426871.1 218667356 7134572 2219238..2219465 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2219465 7134572 AFE_2490 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426871.1 2219238 D 243159 CDS YP_002426872.1 218665118 7136878 2220122..2220814 1 NC_011761.1 lipoprotein 2220814 7136878 AFE_2491 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426872.1 2220122 D 243159 CDS YP_002426873.1 218668009 7134269 complement(2221235..2221537) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2221537 7134269 AFE_2492 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426873.1 2221235 R 243159 CDS YP_002426874.1 218666910 7134774 complement(2221530..2221739) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2221739 7134774 AFE_2493 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426874.1 2221530 R 243159 CDS YP_002426875.1 218665121 7134620 complement(2221801..2222160) 1 NC_011761.1 identified by similarity to GB:AAQ59662.1; hypothetical protein 2222160 7134620 AFE_2494 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426875.1 2221801 R 243159 CDS YP_002426876.1 218668106 7134272 complement(2222232..2222498) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2222498 7134272 AFE_2495 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426876.1 2222232 R 243159 CDS YP_002426877.1 218665950 7136843 2222583..2222993 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2222993 7136843 AFE_2496 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426877.1 2222583 D 243159 CDS YP_002426878.1 218667738 7134160 2222990..2223304 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2223304 7134160 AFE_2497 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426878.1 2222990 D 243159 CDS YP_002426879.1 218665587 7135521 complement(2223385..2224002) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2224002 7135521 AFE_2498 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426879.1 2223385 R 243159 CDS YP_002426880.1 218665041 7135530 complement(2224050..2224205) 1 NC_011761.1 lipoprotein 2224205 7135530 AFE_2499 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002426880.1 2224050 R 243159 CDS YP_002426881.1 218667273 7134970 complement(2224256..2224408) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2224408 7134970 AFE_2500 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426881.1 2224256 R 243159 CDS YP_002426882.1 218665953 7135116 2224447..2224860 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2224860 7135116 AFE_2501 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426882.1 2224447 D 243159 CDS YP_002426883.1 218667782 7134163 complement(2225821..2227266) 1 NC_011761.1 identified by similarity to GB:AAO53608.1; hypothetical protein 2227266 7134163 AFE_2502 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426883.1 2225821 R 243159 CDS YP_002426884.1 218667803 7134457 complement(2227266..2228294) 1 NC_011761.1 identified by similarity to GB:AAO53609.1; hypothetical protein 2228294 7134457 AFE_2503 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426884.1 2227266 R 243159 CDS YP_002426885.1 218666089 7134478 complement(2228357..2229241) 1 NC_011761.1 Structure resembles Tn7; identified by similarity to SP:P05846; match to protein family HMM PF05621; transposon transposition helper protein C 2229241 7134478 AFE_2504 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposition helper protein C YP_002426885.1 2228357 R 243159 CDS YP_002426886.1 218667476 7137010 complement(2229241..2231121) 1 NC_011761.1 Structure resembles Tn7; identified by similarity to SP:P13989; match to protein family HMM PF00665; transposon transposition protein B 2231121 7137010 AFE_2505 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposition protein B YP_002426886.1 2229241 R 243159 CDS YP_002426887.1 218665050 7136768 complement(2231114..2231803) 1 NC_011761.1 Structure resembles Tn7; identified by match to protein family HMM PF08721; match to protein family HMM PF08722; transposon transposase A 2231803 7136768 AFE_2506 Acidithiobacillus ferrooxidans ATCC 23270 transposon transposase A YP_002426887.1 2231114 R 243159 CDS YP_002426888.1 218667099 7134733 complement(2232729..2233106) 1 NC_011761.1 identified by similarity to PIR:C70336; hypothetical protein 2233106 7134733 AFE_2508 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426888.1 2232729 R 243159 CDS YP_002426889.1 218665221 7136699 complement(2233348..2233830) 1 NC_011761.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2233830 7136699 AFE_2509 Acidithiobacillus ferrooxidans ATCC 23270 MerR family transcriptional regulator YP_002426889.1 2233348 R 243159 CDS YP_002426890.1 218665610 7135709 complement(2233876..2234001) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2234001 7135709 AFE_2510 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426890.1 2233876 R 243159 CDS YP_002426891.1 218667977 7135553 2234077..2234232 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2234232 7135553 AFE_2511 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426891.1 2234077 D 243159 CDS YP_002426892.1 218665359 7134741 complement(2234434..2234553) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2234553 7134741 AFE_2512 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426892.1 2234434 R 243159 CDS YP_002426893.1 218667572 7136141 complement(2234644..2235168) 1 NC_011761.1 identified by match to protein family HMM PF08238; hypothetical protein 2235168 7136141 AFE_2513 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426893.1 2234644 R 243159 CDS YP_002426894.1 218666721 7136439 complement(2235196..2236815) 1 NC_011761.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 2236815 prfC 7136439 prfC Acidithiobacillus ferrooxidans ATCC 23270 peptide chain release factor 3 YP_002426894.1 2235196 R 243159 CDS YP_002426895.1 218666022 7137216 complement(2236822..2237298) 1 NC_011761.1 identified by similarity to SP:P09453; match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 2237298 rimI 7137216 rimI Acidithiobacillus ferrooxidans ATCC 23270 ribosomal-protein-alanine acetyltransferase YP_002426895.1 2236822 R 243159 CDS YP_002426896.1 218665329 7134238 complement(2237300..2237968) 1 NC_011761.1 identified by match to protein family HMM PF00814; hypothetical protein 2237968 7134238 AFE_2516 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426896.1 2237300 R 243159 CDS YP_002426897.1 218665873 7136270 complement(2237968..2239893) 1 NC_011761.1 ATP-dependent helicase, DEXD family 2239893 7136270 AFE_2517 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent helicase, DEXD family YP_002426897.1 2237968 R 243159 CDS YP_002426898.1 218666946 7135428 2239963..2240325 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2240325 7135428 AFE_2519 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426898.1 2239963 D 243159 CDS YP_002426899.1 218667617 7134656 complement(2240322..2240429) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2240429 7134656 AFE_2518 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426899.1 2240322 R 243159 CDS YP_002426900.1 218667299 7135791 complement(2240538..2241635) 1 NC_011761.1 identified by match to protein family HMM PF00877; NLP/P60 family protein 2241635 7135791 AFE_2520 Acidithiobacillus ferrooxidans ATCC 23270 NLP/P60 family protein YP_002426900.1 2240538 R 243159 CDS YP_002426901.1 218668021 7135143 2241618..2241725 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2241725 7135143 AFE_2521 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426901.1 2241618 D 243159 CDS YP_002426902.1 218665199 7134786 2242136..2243392 1 NC_011761.1 identified by match to protein family HMM PF04966; carbohydrate-selective porin, OprB family 2243392 7134786 AFE_2522 Acidithiobacillus ferrooxidans ATCC 23270 carbohydrate-selective porin, OprB family YP_002426902.1 2242136 D 243159 CDS YP_002426903.1 218666091 7135686 2243425..2243712 1 NC_011761.1 identified by match to protein family HMM PF04023; feoA family protein 2243712 7135686 AFE_2523 Acidithiobacillus ferrooxidans ATCC 23270 feoA family protein YP_002426903.1 2243425 D 243159 CDS YP_002426904.1 218666783 7137012 2243757..2246057 1 NC_011761.1 identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 2246057 feoB 7137012 feoB Acidithiobacillus ferrooxidans ATCC 23270 ferrous iron transport protein B YP_002426904.1 2243757 D 243159 CDS YP_002426905.1 218665501 7137279 2246054..2246353 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2246353 7137279 AFE_2525 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426905.1 2246054 D 243159 CDS YP_002426906.1 218666922 7135872 2246451..2247323 1 NC_011761.1 identified by match to protein family HMM PF00795; match to protein family HMM TIGR03381; hydrolase 2247323 7135872 AFE_2526 Acidithiobacillus ferrooxidans ATCC 23270 hydrolase YP_002426906.1 2246451 D 243159 CDS YP_002426907.1 218668095 7134632 2247316..2248068 1 NC_011761.1 identified by match to protein family HMM PF00117; match to protein family HMM PF07722; glutamine amidotransferase 2248068 7134632 AFE_2528 Acidithiobacillus ferrooxidans ATCC 23270 glutamine amidotransferase YP_002426907.1 2247316 D 243159 CDS YP_002426908.1 218666363 7136831 complement(2248065..2248712) 1 NC_011761.1 identified by similarity to GB:AAN66167.1; match to protein family HMM PF09335; DedA family membrane protein 2248712 7136831 AFE_2527 Acidithiobacillus ferrooxidans ATCC 23270 DedA family membrane protein YP_002426908.1 2248065 R 243159 CDS YP_002426909.1 218667681 7136503 complement(2248744..2249100) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2249100 7136503 AFE_2529 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426909.1 2248744 R 243159 CDS YP_002426910.1 218667096 7135464 complement(2249097..2249849) 1 NC_011761.1 identified by similarity to GB:AAQ61408.1; hypothetical protein 2249849 7135464 AFE_2530 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426910.1 2249097 R 243159 CDS YP_002426911.1 218665191 7136696 complement(2249851..2250777) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2250777 7136696 AFE_2531 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002426911.1 2249851 R 243159 CDS YP_002426912.1 218666155 7135677 2250862..2251464 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2251464 7135677 AFE_2532 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426912.1 2250862 D 243159 CDS YP_002426913.1 218668128 7134055 complement(2251486..2252631) 1 NC_011761.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family 2252631 7134055 AFE_2533 Acidithiobacillus ferrooxidans ATCC 23270 oxidoreductase, aldo/keto reductase family YP_002426913.1 2251486 R 243159 CDS YP_002426914.1 218666286 7136865 complement(2252628..2253794) 1 NC_011761.1 identified by match to protein family HMM PF00850; histone deacetylase family protein 2253794 7136865 AFE_2534 Acidithiobacillus ferrooxidans ATCC 23270 histone deacetylase family protein YP_002426914.1 2252628 R 243159 CDS YP_002426915.1 218666218 7137294 complement(2253839..2256256) 1 NC_011761.1 von Willebrand factor type A domain-containing protein 2256256 7137294 AFE_2535 Acidithiobacillus ferrooxidans ATCC 23270 von Willebrand factor type A domain-containing protein YP_002426915.1 2253839 R 243159 CDS YP_002426916.1 218667996 7136574 complement(2256344..2257174) 1 NC_011761.1 identified by similarity to SP:Q02441; similarity to SP:Q51858; match to protein family HMM PF07728; match to protein family HMM PF08406; CbbQ/NirQ/NorQ/GpvN family protein 2257174 7136574 AFE_2536 Acidithiobacillus ferrooxidans ATCC 23270 CbbQ/NirQ/NorQ/GpvN family protein YP_002426916.1 2256344 R 243159 CDS YP_002426917.1 218666651 7134760 complement(2257171..2257572) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2257572 7134760 AFE_2537 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426917.1 2257171 R 243159 CDS YP_002426918.1 218665939 7134522 complement(2257672..2258040) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2258040 7134522 AFE_2538 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426918.1 2257672 R 243159 CDS YP_002426919.1 218668116 7134149 complement(2258077..2258436) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2258436 7134149 AFE_2539 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426919.1 2258077 R 243159 CDS YP_002426920.1 218667207 7136853 complement(2258510..2259421) 1 NC_011761.1 identified by match to protein family HMM PF03099; biotin/lipoate A/B protein ligase family protein 2259421 7136853 AFE_2540 Acidithiobacillus ferrooxidans ATCC 23270 biotin/lipoate A/B protein ligase family protein YP_002426920.1 2258510 R 243159 CDS YP_002426921.1 218665100 7135601 complement(2259522..2259935) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2259935 7135601 AFE_2541 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426921.1 2259522 R 243159 CDS YP_002426922.1 218667859 7134251 complement(2260062..2261405) 1 NC_011761.1 identified by match to protein family HMM PF03349; match to protein family HMM TIGR03304; OMPP1/FadL/TodX family outer membrane protein 2261405 7134251 AFE_2542 Acidithiobacillus ferrooxidans ATCC 23270 OMPP1/FadL/TodX family outer membrane protein YP_002426922.1 2260062 R 243159 CDS YP_002426923.1 218666727 7134937 complement(2261618..2262754) 1 NC_011761.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2262754 7134937 AFE_2543 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002426923.1 2261618 R 243159 CDS YP_002426924.1 218665712 7137222 complement(2262779..2263840) 1 NC_011761.1 identified by match to protein family HMM PF01494; match to protein family HMM PF05834; match to protein family HMM TIGR02032; geranylgeranyl reductase 2263840 7137222 AFE_2544 Acidithiobacillus ferrooxidans ATCC 23270 geranylgeranyl reductase YP_002426924.1 2262779 R 243159 CDS YP_002426925.1 218666413 7137195 complement(2263837..2264907) 1 NC_011761.1 identified by similarity to PIR:C70441; match to protein family HMM PF03099; lipoate-protein ligase A 2264907 7137195 AFE_2545 Acidithiobacillus ferrooxidans ATCC 23270 lipoate-protein ligase A YP_002426925.1 2263837 R 243159 CDS YP_002426926.1 218667910 7134358 complement(2264956..2266089) 1 NC_011761.1 identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2266089 7134358 AFE_2546 Acidithiobacillus ferrooxidans ATCC 23270 radical SAM domain-containing protein YP_002426926.1 2264956 R 243159 CDS YP_002426927.1 218666889 7135217 complement(2266162..2266599) 1 NC_011761.1 identified by similarity to SP:P23884; match to protein family HMM PF01597; glycine cleavage system H protein 2266599 7135217 AFE_2547 Acidithiobacillus ferrooxidans ATCC 23270 glycine cleavage system H protein YP_002426927.1 2266162 R 243159 CDS YP_002426928.1 218665987 7134599 complement(2266655..2267053) 1 NC_011761.1 identified by similarity to PIR:A83048; hypothetical protein 2267053 7134599 AFE_2548 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426928.1 2266655 R 243159 CDS YP_002426929.1 218665699 7134201 complement(2267050..2267496) 1 NC_011761.1 identified by similarity to SP:P23884; match to protein family HMM PF01597; glycine cleavage system protein H 2267496 7134201 AFE_2549 Acidithiobacillus ferrooxidans ATCC 23270 glycine cleavage system protein H YP_002426929.1 2267050 R 243159 CDS YP_002426930.1 218665787 7137182 complement(2267565..2268476) 1 NC_011761.1 identified by similarity to PIR:T50538; match to protein family HMM PF02754; succinate dehydrogenase/fumarate reductase, C subunit 2268476 sdhC 7137182 sdhC Acidithiobacillus ferrooxidans ATCC 23270 succinate dehydrogenase/fumarate reductase, C subunit YP_002426930.1 2267565 R 243159 CDS YP_002426931.1 218666436 7136102 complement(2268469..2269188) 1 NC_011761.1 iron-sulfur cluster-binding protein 2269188 7136102 AFE_2551 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein YP_002426931.1 2268469 R 243159 CDS YP_002426932.1 218667347 7134382 complement(2269212..2270063) 1 NC_011761.1 identified by similarity to PIR:H70335; hypothetical protein 2270063 7134382 AFE_2552 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426932.1 2269212 R 243159 CDS YP_002426933.1 218666670 7135192 complement(2270020..2271075) 1 NC_011761.1 identified by similarity to PIR:G70335; match to protein family HMM PF00070; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 2271075 7135192 AFE_2553 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002426933.1 2270020 R 243159 CDS YP_002426934.1 218666912 7134541 complement(2271088..2272431) 1 NC_011761.1 identified by similarity to PIR:H90265; match to protein family HMM PF02754; heterodisulfide reductase subunit B 2272431 7134541 AFE_2554 Acidithiobacillus ferrooxidans ATCC 23270 heterodisulfide reductase subunit B YP_002426934.1 2271088 R 243159 CDS YP_002426935.1 218665969 7134622 complement(2272442..2273128) 1 NC_011761.1 identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 2273128 7134622 AFE_2555 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein YP_002426935.1 2272442 R 243159 CDS YP_002426936.1 218666605 7134182 complement(2273192..2273662) 1 NC_011761.1 identified by similarity to GB:AAM72097.1; hypothetical protein 2273662 7134182 AFE_2556 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426936.1 2273192 R 243159 CDS YP_002426937.1 218665913 7135336 complement(2273706..2273936) 1 NC_011761.1 identified by similarity to GB:CAD85318.1; match to protein family HMM PF01206; hypothetical protein 2273936 7135336 AFE_2557 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426937.1 2273706 R 243159 CDS YP_002426938.1 218665090 7134123 complement(2274060..2274389) 1 NC_011761.1 identified by match to protein family HMM PF00581; rhodanese-like domain-containing protein 2274389 7134123 AFE_2558 Acidithiobacillus ferrooxidans ATCC 23270 rhodanese-like domain-containing protein YP_002426938.1 2274060 R 243159 CDS YP_002426939.1 218667275 7135020 complement(2274450..2275478) 1 NC_011761.1 identified by similarity to SP:Q44118; match to protein family HMM PF04055; match to protein family HMM PF06463; match to protein family HMM TIGR02666; molybdenum cofactor biosynthesis protein A 2275478 moaA 7135020 moaA Acidithiobacillus ferrooxidans ATCC 23270 molybdenum cofactor biosynthesis protein A YP_002426939.1 2274450 R 243159 CDS YP_002426940.1 218666401 7135118 2275749..2276054 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2276054 7135118 AFE_2560 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426940.1 2275749 D 243159 CDS YP_002426941.1 218666366 7134345 complement(2276058..2276567) 1 NC_011761.1 identified by similarity to SP:P30747; match to protein family HMM PF01967; match to protein family HMM TIGR00581; molybdenum cofactor biosynthesis protein C 2276567 moaC 7134345 moaC Acidithiobacillus ferrooxidans ATCC 23270 molybdenum cofactor biosynthesis protein C YP_002426941.1 2276058 R 243159 CDS YP_002426942.1 218667763 7136506 2276822..2277868 1 NC_011761.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 2277868 mreB 7136506 mreB Acidithiobacillus ferrooxidans ATCC 23270 rod shape-determining protein MreB YP_002426942.1 2276822 D 243159 CDS YP_002426943.1 218668062 7134438 2277892..2278731 1 NC_011761.1 identified by match to protein family HMM PF04085; match to protein family HMM TIGR00219; rod shape-determining protein MreC 2278731 mreC 7134438 mreC Acidithiobacillus ferrooxidans ATCC 23270 rod shape-determining protein MreC YP_002426943.1 2277892 D 243159 CDS YP_002426944.1 218666662 7136797 2278728..2279204 1 NC_011761.1 identified by similarity to SP:P16927; match to protein family HMM TIGR03426; rod shape-determining protein MreD 2279204 7136797 AFE_2564 Acidithiobacillus ferrooxidans ATCC 23270 rod shape-determining protein MreD YP_002426944.1 2278728 D 243159 CDS YP_002426945.1 218667340 7134533 2279201..2281009 1 NC_011761.1 identified by similarity to SP:P08150; match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein 2 2281009 mrdA 7134533 mrdA Acidithiobacillus ferrooxidans ATCC 23270 penicillin-binding protein 2 YP_002426945.1 2279201 D 243159 CDS YP_002426946.1 218665924 7135185 2281006..2282217 1 NC_011761.1 identified by similarity to SP:P15035; match to protein family HMM PF01098; match to protein family HMM TIGR02210; rod shape-determining protein RodA 2282217 rodA 7135185 rodA Acidithiobacillus ferrooxidans ATCC 23270 rod shape-determining protein RodA YP_002426946.1 2281006 D 243159 CDS YP_002426947.1 218665720 7134134 2282251..2283417 1 NC_011761.1 identified by similarity to SP:P04287; match to protein family HMM PF00768; match to protein family HMM PF07943; D-alanyl-D-alanine carboxypeptidase 2283417 7134134 AFE_2567 Acidithiobacillus ferrooxidans ATCC 23270 D-alanyl-D-alanine carboxypeptidase YP_002426947.1 2282251 D 243159 CDS YP_002426948.1 218666188 7135953 2283480..2283962 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2283962 7135953 AFE_2568 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426948.1 2283480 D 243159 CDS YP_002426949.1 218667354 7134089 2283973..2284611 1 NC_011761.1 identified by similarity to SP:P30976; match to protein family HMM PF03099; match to protein family HMM TIGR00214; lipoate-protein ligase B 2284611 lipB 7134089 lipB Acidithiobacillus ferrooxidans ATCC 23270 lipoate-protein ligase B YP_002426949.1 2283973 D 243159 CDS YP_002426950.1 218668084 7136876 2284614..2285567 1 NC_011761.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2285567 lipA 7136876 lipA Acidithiobacillus ferrooxidans ATCC 23270 lipoyl synthase YP_002426950.1 2284614 D 243159 CDS YP_002426951.1 218667128 7136820 2285582..2286382 1 NC_011761.1 identified by similarity to GB:AAO58238.1; match to protein family HMM PF02698; hypothetical protein 2286382 7136820 AFE_2571 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426951.1 2285582 D 243159 CDS YP_002426952.1 218666907 7134674 complement(2286413..2287459) 1 NC_011761.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2287459 7134674 AFE_2572 Acidithiobacillus ferrooxidans ATCC 23270 ErfK/YbiS/YcfS/YnhG family protein YP_002426952.1 2286413 R 243159 CDS YP_002426953.1 218667585 7134617 2287612..2288043 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2288043 7134617 AFE_2573 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426953.1 2287612 D 243159 CDS YP_002426954.1 218667504 7135756 2288126..2289598 1 NC_011761.1 identified by similarity to PIR:E81830; hypothetical protein 2289598 7135756 AFE_2574 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426954.1 2288126 D 243159 CDS YP_002426955.1 218666527 7136369 2289608..2290777 1 NC_011761.1 identified by similarity to GB:AAD20272.1; hypothetical protein 2290777 7136369 AFE_2575 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426955.1 2289608 D 243159 CDS YP_002426956.1 218666731 7136339 2290837..2291403 1 NC_011761.1 identified by match to protein family HMM PF03029; match to protein family HMM TIGR00231; small GTP-binding protein 2291403 7136339 AFE_2576 Acidithiobacillus ferrooxidans ATCC 23270 small GTP-binding protein YP_002426956.1 2290837 D 243159 CDS YP_002426957.1 218665833 7137226 2291400..2292038 1 NC_011761.1 identified by similarity to PIR:A81195; hypothetical protein 2292038 7137226 AFE_2577 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426957.1 2291400 D 243159 CDS YP_002426958.1 218665570 7135387 2292084..2292446 1 NC_011761.1 identified by match to protein family HMM PF03259; roadblock/LC7 domain-containing protein 2292446 7135387 AFE_2578 Acidithiobacillus ferrooxidans ATCC 23270 roadblock/LC7 domain-containing protein YP_002426958.1 2292084 D 243159 CDS YP_002426959.1 218666953 7135942 complement(2292458..2292586) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2292586 7135942 AFE_2579 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426959.1 2292458 R 243159 CDS YP_002426960.1 218667643 7134663 2292536..2293420 1 NC_011761.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2293420 glyQ 7134663 glyQ Acidithiobacillus ferrooxidans ATCC 23270 glycyl-tRNA synthetase subunit alpha YP_002426960.1 2292536 D 243159 CDS YP_002426961.1 218666492 7135817 2293407..2295491 1 NC_011761.1 identified by similarity to SP:P00961; match to protein family HMM PF02092; match to protein family HMM PF05746; match to protein family HMM TIGR00211; glycyl-tRNA synthetase subunit beta 2295491 glyS 7135817 glyS Acidithiobacillus ferrooxidans ATCC 23270 glycyl-tRNA synthetase subunit beta YP_002426961.1 2293407 D 243159 CDS YP_002426962.1 218665775 7136302 2295491..2296030 1 NC_011761.1 identified by similarity to GB:AAO91485.1; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662; histidinol-phosphate phosphatase domain-containing protein 2296030 7136302 AFE_2582 Acidithiobacillus ferrooxidans ATCC 23270 histidinol-phosphate phosphatase domain-containing protein YP_002426962.1 2295491 D 243159 CDS YP_002426963.1 218668047 7136090 2296027..2296755 1 NC_011761.1 identified by match to protein family HMM PF01553; acyltransferase family protein 2296755 7136090 AFE_2584 Acidithiobacillus ferrooxidans ATCC 23270 acyltransferase family protein YP_002426963.1 2296027 D 243159 CDS YP_002426964.1 218666801 7134812 complement(2296703..2297611) 1 NC_011761.1 identified by similarity to SP:P17116; match to protein family HMM PF02655; match to protein family HMM PF08443; match to protein family HMM TIGR00768; alpha-L-glutamate ligase 2297611 7134812 AFE_2583 Acidithiobacillus ferrooxidans ATCC 23270 alpha-L-glutamate ligase YP_002426964.1 2296703 R 243159 CDS YP_002426965.1 218666265 7137050 complement(2297614..2297934) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2297934 7137050 AFE_2585 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426965.1 2297614 R 243159 CDS YP_002426966.1 218666090 7136622 2298112..2299464 1 NC_011761.1 identified by similarity to PIR:H90265; match to protein family HMM PF02754; heterodisulfide reductase subunit B 2299464 7136622 AFE_2586 Acidithiobacillus ferrooxidans ATCC 23270 heterodisulfide reductase subunit B YP_002426966.1 2298112 D 243159 CDS YP_002426967.1 218665794 7137011 2299471..2299944 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2299944 7137011 AFE_2587 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426967.1 2299471 D 243159 CDS YP_002426968.1 218667166 7136109 2300182..2300883 1 NC_011761.1 identified by similarity to GB:CAE33726.1; match to protein family HMM PF02677; hypothetical protein 2300883 7136109 AFE_2588 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426968.1 2300182 D 243159 CDS YP_002426969.1 218667401 7134715 complement(2301397..2301951) 1 NC_011761.1 identified by similarity to SP:P13016; match to protein family HMM PF01510; N-acetyl-anhydromuranmyl-L-alanine amidase 2301951 ampD 7134715 ampD Acidithiobacillus ferrooxidans ATCC 23270 N-acetyl-anhydromuranmyl-L-alanine amidase YP_002426969.1 2301397 R 243159 CDS YP_002426970.1 218666024 7136924 complement(2301948..2302283) 1 NC_011761.1 identified by similarity to SP:P52229; thioredoxin 2302283 7136924 AFE_2590 Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin YP_002426970.1 2301948 R 243159 CDS YP_002426971.1 218667780 7134240 complement(2302544..2302768) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2302768 7134240 AFE_2591 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426971.1 2302544 R 243159 CDS YP_002426972.1 218665754 7134455 complement(2302761..2302922) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2302922 7134455 AFE_2592 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426972.1 2302761 R 243159 CDS YP_002426973.1 218666004 7136069 complement(2302879..2303298) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2303298 7136069 AFE_2593 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426973.1 2302879 R 243159 CDS YP_002426974.1 218665322 7134219 complement(2303356..2303970) 1 NC_011761.1 identified by similarity to GB:CAB57289.1; match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 2303970 gst 7134219 gst Acidithiobacillus ferrooxidans ATCC 23270 glutathione S-transferase YP_002426974.1 2303356 R 243159 CDS YP_002426975.1 218667897 7136263 2304199..2304573 1 NC_011761.1 identified by match to protein family HMM PF01638; transcriptional regulator 2304573 7136263 AFE_2595 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002426975.1 2304199 D 243159 CDS YP_002426976.1 218665612 7135204 complement(2304658..2306199) 1 NC_011761.1 identified by match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00973; 2-isopropylmalate synthase 2306199 leuA-1 7135204 leuA-1 Acidithiobacillus ferrooxidans ATCC 23270 2-isopropylmalate synthase YP_002426976.1 2304658 R 243159 CDS YP_002426977.1 218667045 7135555 complement(2306274..2307593) 1 NC_011761.1 identified by match to protein family HMM PF00004; match to protein family HMM PF00158; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator 2307593 7135555 AFE_2597 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator YP_002426977.1 2306274 R 243159 CDS YP_002426978.1 218667962 7136645 2307809..2307919 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2307919 7136645 AFE_2598 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426978.1 2307809 D 243159 CDS YP_002426979.1 218665146 7135269 2307992..2308378 1 NC_011761.1 identified by similarity to PIR:C69319; hypothetical protein 2308378 7135269 AFE_2599 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426979.1 2307992 D 243159 CDS YP_002426980.1 218667328 7134298 2308422..2308652 1 NC_011761.1 identified by similarity to SP:O29695; match to protein family HMM PF01206; hypothetical protein 2308652 7134298 AFE_2600 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426980.1 2308422 D 243159 CDS YP_002426981.1 218666934 7135172 2308695..2309834 1 NC_011761.1 identified by similarity to SP:Q9R112; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 2309834 7135172 AFE_2601 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002426981.1 2308695 D 243159 CDS YP_002426982.1 218668132 7134644 complement(2310568..2310849) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2310849 7134644 AFE_2602 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426982.1 2310568 R 243159 CDS YP_002426983.1 218667412 7136869 2310953..2311564 1 NC_011761.1 identified by similarity to PIR:H83045; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 2311564 7136869 AFE_2603 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426983.1 2310953 D 243159 CDS YP_002426984.1 218666735 7136936 2311933..2312856 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2312856 7136936 AFE_2604 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002426984.1 2311933 D 243159 CDS YP_002426985.1 218666247 7137230 2312853..2314289 1 NC_011761.1 ABC transporter permease 2314289 7137230 AFE_2605 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002426985.1 2312853 D 243159 CDS YP_002426986.1 218666177 7135835 complement(2315128..2315580) 1 NC_011761.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 2315580 7135835 AFE_2607 Acidithiobacillus ferrooxidans ATCC 23270 MerR family transcriptional regulator YP_002426986.1 2315128 R 243159 CDS YP_002426987.1 218668129 7134078 complement(2315555..2315854) 1 NC_011761.1 identified by similarity to SP:P06984; match to protein family HMM PF00216; match to protein family HMM TIGR00987; integration host factor subunit alpha 2315854 ihfA 7134078 ihfA Acidithiobacillus ferrooxidans ATCC 23270 integration host factor subunit alpha YP_002426987.1 2315555 R 243159 CDS YP_002426988.1 218667218 7136866 complement(2315864..2318263) 1 NC_011761.1 identified by similarity to SP:P07395; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 2318263 pheT 7136866 pheT Acidithiobacillus ferrooxidans ATCC 23270 phenylalanyl-tRNA synthetase subunit beta YP_002426988.1 2315864 R 243159 CDS YP_002426989.1 218665328 7135612 complement(2318273..2319295) 1 NC_011761.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2319295 pheS 7135612 pheS Acidithiobacillus ferrooxidans ATCC 23270 phenylalanyl-tRNA synthetase subunit alpha YP_002426989.1 2318273 R 243159 CDS YP_002426990.1 218667881 7136269 complement(2319316..2319675) 1 NC_011761.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2319675 rplT 7136269 rplT Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L20 YP_002426990.1 2319316 R 243159 CDS YP_002426991.1 218667146 7136540 complement(2319694..2319891) 1 NC_011761.1 identified by similarity to SP:P07085; match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 2319891 rpmI 7136540 rpmI Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L35 YP_002426991.1 2319694 R 243159 CDS YP_002426992.1 218667856 7134693 complement(2319901..2320419) 1 NC_011761.1 identified by similarity to SP:P02999; match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 2320419 infC 7134693 infC Acidithiobacillus ferrooxidans ATCC 23270 translation initiation factor IF-3 YP_002426992.1 2319901 R 243159 CDS YP_002426993.1 218666034 7134934 complement(2320436..2322370) 1 NC_011761.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2322370 thrS 7134934 thrS Acidithiobacillus ferrooxidans ATCC 23270 threonyl-tRNA synthetase YP_002426993.1 2320436 R 243159 CDS YP_002426994.1 218665657 7135832 complement(2322532..2322684) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2322684 7135832 AFE_2616 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002426994.1 2322532 R 243159 CDS YP_002426995.1 218666618 7137140 complement(2322654..2324099) 1 NC_011761.1 identified by similarity to SP:P50973; match to protein family HMM PF00361; match to protein family HMM TIGR01770; NADH-quinone oxidoreductase subunit N 2324099 nuoN 7137140 nuoN Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit N YP_002426995.1 2322654 R 243159 CDS YP_002426996.1 218667047 7135349 complement(2324112..2325596) 1 NC_011761.1 identified by similarity to SP:P50974; match to protein family HMM PF00361; match to protein family HMM TIGR01972; NADH-quinone oxidoreductase subunit M 2325596 nuoM 7135349 nuoM Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit M YP_002426996.1 2324112 R 243159 CDS YP_002426997.1 218667329 7136647 complement(2325600..2327564) 1 NC_011761.1 identified by similarity to SP:P50939; match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974; NADH-quinone oxidoreductase subunit L 2327564 nuoL 7136647 nuoL Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit L YP_002426997.1 2325600 R 243159 CDS YP_002426998.1 218666105 7135173 complement(2327584..2327901) 1 NC_011761.1 identified by similarity to SP:P50940; match to protein family HMM PF00420; NADH-quinone oxidoreductase subunit K 2327901 nuoK 7135173 nuoK Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit K YP_002426998.1 2327584 R 243159 CDS YP_002426999.1 218666659 7137026 complement(2327901..2328497) 1 NC_011761.1 identified by similarity to SP:P50975; match to protein family HMM PF00499; NADH-quinone oxidoreductase subunit J 2328497 nuoJ 7137026 nuoJ Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit J YP_002426999.1 2327901 R 243159 CDS YP_002427000.1 218668010 7134530 complement(2328513..2329004) 1 NC_011761.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2329004 nuoI 7134530 nuoI Acidithiobacillus ferrooxidans ATCC 23270 NADH dehydrogenase subunit I YP_002427000.1 2328513 R 243159 CDS YP_002427001.1 218666276 7134775 complement(2329015..2330040) 1 NC_011761.1 identified by match to protein family HMM PF00146; NADH-quinone oxidoreductase subunit H 2330040 nuoH 7134775 nuoH Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit H YP_002427001.1 2329015 R 243159 CDS YP_002427002.1 218666779 7136633 complement(2330052..2332400) 1 NC_011761.1 identified by match to protein family HMM PF00111; match to protein family HMM PF00384; match to protein family HMM PF04879; match to protein family HMM TIGR01973; NADH-quinone oxidoreductase subunit G 2332400 nuoG 7136633 nuoG Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit G YP_002427002.1 2330052 R 243159 CDS YP_002427003.1 218667549 7137275 complement(2332400..2333683) 1 NC_011761.1 identified by similarity to SP:O07948; match to protein family HMM PF01512; match to protein family HMM TIGR01959; NADH-quinone oxidoreductase subunit F 2333683 nuoF 7137275 nuoF Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit F YP_002427003.1 2332400 R 243159 CDS YP_002427004.1 218666126 7136415 complement(2333673..2334164) 1 NC_011761.1 identified by match to protein family HMM PF01257; match to protein family HMM TIGR01958; NADH-quinone oxidoreductase subunit E 2334164 nuoE 7136415 nuoE Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit E YP_002427004.1 2333673 R 243159 CDS YP_002427005.1 218667952 7134026 complement(2334168..2335421) 1 NC_011761.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2335421 nuoD 7134026 nuoD Acidithiobacillus ferrooxidans ATCC 23270 NADH dehydrogenase subunit D YP_002427005.1 2334168 R 243159 CDS YP_002427006.1 218666570 7135259 complement(2335405..2336013) 1 NC_011761.1 identified by similarity to SP:O84971; match to protein family HMM PF00329; match to protein family HMM TIGR01961; NADH-quinone oxidoreductase subunit C 2336013 nuoC 7135259 nuoC Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit C YP_002427006.1 2335405 R 243159 CDS YP_002427007.1 218666644 7135300 complement(2336017..2336493) 1 NC_011761.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2336493 nuoB 7135300 nuoB Acidithiobacillus ferrooxidans ATCC 23270 NADH dehydrogenase subunit B YP_002427007.1 2336017 R 243159 CDS YP_002427008.1 218667509 7134515 complement(2336484..2336840) 1 NC_011761.1 identified by similarity to SP:O84969; match to protein family HMM PF00507; NADH-quinone oxidoreductase subunit A 2336840 nuoA 7134515 nuoA Acidithiobacillus ferrooxidans ATCC 23270 NADH-quinone oxidoreductase subunit A YP_002427008.1 2336484 R 243159 CDS YP_002427009.1 218666041 7135844 complement(2337096..2337497) 1 NC_011761.1 identified by similarity to SP:P33582; match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 2337497 secG 7135844 secG Acidithiobacillus ferrooxidans ATCC 23270 preprotein translocase subunit SecG YP_002427009.1 2337096 R 243159 CDS YP_002427010.1 218667429 7136961 complement(2337502..2338275) 1 NC_011761.1 identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triosephosphate isomerase 2338275 tpiA 7136961 tpiA Acidithiobacillus ferrooxidans ATCC 23270 triosephosphate isomerase YP_002427010.1 2337502 R 243159 CDS YP_002427011.1 218666750 7136718 complement(2338382..2339746) 1 NC_011761.1 identified by similarity to SP:P31120; match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase 2339746 glmM 7136718 glmM Acidithiobacillus ferrooxidans ATCC 23270 phosphoglucosamine mutase YP_002427011.1 2338382 R 243159 CDS YP_002427012.1 218667389 7137245 complement(2339785..2340618) 1 NC_011761.1 identified by similarity to SP:P26282; match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 2340618 folP 7137245 folP Acidithiobacillus ferrooxidans ATCC 23270 dihydropteroate synthase YP_002427012.1 2339785 R 243159 CDS YP_002427013.1 218666706 7136912 complement(2340615..2342540) 1 NC_011761.1 identified by similarity to SP:P28691; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; cell division protein FtsH 2342540 ftsH 7136912 ftsH Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsH YP_002427013.1 2340615 R 243159 CDS YP_002427014.1 218666473 7134577 complement(2342638..2344083) 1 NC_011761.1 identified by similarity to SP:P46473; match to protein family HMM PF01523; tldD protein 2344083 tldD 7134577 tldD Acidithiobacillus ferrooxidans ATCC 23270 tldD protein YP_002427014.1 2342638 R 243159 CDS YP_002427015.1 218665782 7136283 2344408..2347254 1 NC_011761.1 identified by similarity to GB:CAB82485.1; match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02506; ribonucleotide-diphosphate reductase subunit alpha 2347254 nrdA 7136283 nrdA Acidithiobacillus ferrooxidans ATCC 23270 ribonucleotide-diphosphate reductase subunit alpha YP_002427015.1 2344408 D 243159 CDS YP_002427016.1 218665361 7136097 2347267..2348409 1 NC_011761.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 2348409 nrdB 7136097 nrdB Acidithiobacillus ferrooxidans ATCC 23270 ribonucleotide-diphosphate reductase subunit beta YP_002427016.1 2347267 D 243159 CDS YP_002427017.1 218666001 7136143 2348901..2349170 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2349170 7136143 AFE_2640 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427017.1 2348901 D 243159 CDS YP_002427018.1 218667370 7134216 2349182..2349523 1 NC_011761.1 identified by match to protein family HMM PF01022; ArsR family transcriptional regulator 2349523 7134216 AFE_2641 Acidithiobacillus ferrooxidans ATCC 23270 ArsR family transcriptional regulator YP_002427018.1 2349182 D 243159 CDS YP_002427019.1 218665297 7136892 2349520..2350797 1 NC_011761.1 identified by match to protein family HMM PF07690; hypothetical protein 2350797 7136892 AFE_2642 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427019.1 2349520 D 243159 CDS YP_002427020.1 218666995 7136238 2350794..2351135 1 NC_011761.1 identified by similarity to GB:AAK02599.1; hypothetical protein 2351135 7136238 AFE_2643 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427020.1 2350794 D 243159 CDS YP_002427021.1 218667469 7134858 2351189..2351941 1 NC_011761.1 identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 2351941 7134858 AFE_2644 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002427021.1 2351189 D 243159 CDS YP_002427022.1 218666121 7136761 complement(2352321..2352722) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2352722 7136761 AFE_2645 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427022.1 2352321 R 243159 CDS YP_002427023.1 218665309 7134020 complement(2352957..2353202) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2353202 7134020 AFE_2646 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427023.1 2352957 R 243159 CDS YP_002427024.1 218667031 7136250 complement(2353318..2353449) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2353449 7136250 AFE_2647 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427024.1 2353318 R 243159 CDS YP_002427025.1 218667950 7134896 2354638..2355072 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2355072 7134896 AFE_2648 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427025.1 2354638 D 243159 CDS YP_002427026.1 218665667 7135257 complement(2355199..2355318) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2355318 7135257 AFE_2649 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427026.1 2355199 R 243159 CDS YP_002427027.1 218666517 7137150 complement(2355693..2355857) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2355857 7137150 AFE_2650 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427027.1 2355693 R 243159 CDS YP_002427028.1 218667520 7136329 2355887..2356981 1 NC_011761.1 identified by match to protein family HMM PF05425; copper resistance protein 2356981 7136329 AFE_2651 Acidithiobacillus ferrooxidans ATCC 23270 copper resistance protein YP_002427028.1 2355887 D 243159 CDS YP_002427029.1 218665655 7136385 2357000..2357146 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2357146 7136385 AFE_2652 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427029.1 2357000 D 243159 CDS YP_002427030.1 218665868 7137138 complement(2357600..2357887) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2357887 7137138 AFE_2653 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427030.1 2357600 R 243159 CDS YP_002427031.1 218666878 7135423 2358296..2359432 1 NC_011761.1 identified by match to protein family HMM PF00817; DNA polymerase IV 2359432 dinB 7135423 dinB Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase IV YP_002427031.1 2358296 D 243159 CDS YP_002427032.1 218666358 7134588 2359433..2359819 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 2359819 7134588 AFE_2655 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002427032.1 2359433 D 243159 CDS YP_002427033.1 218666553 7136497 complement(2359889..2360626) 1 NC_011761.1 identified by similarity to GB:BAC74278.1; match to protein family HMM PF01904; hypothetical protein 2360626 7136497 AFE_2656 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427033.1 2359889 R 243159 CDS YP_002427034.1 218667220 7135283 complement(2360635..2360760) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2360760 7135283 AFE_2657 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427034.1 2360635 R 243159 CDS YP_002427035.1 218666707 7135614 2361174..2361476 1 NC_011761.1 identified by similarity to GB:AAM81143.1; hypothetical protein 2361476 7135614 AFE_2658 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427035.1 2361174 D 243159 CDS YP_002427036.1 218665918 7137120 2361538..2362944 1 NC_011761.1 identified by match to protein family HMM PF00324; amino acid permease family protein 2362944 7137120 AFE_2659 Acidithiobacillus ferrooxidans ATCC 23270 amino acid permease family protein YP_002427036.1 2361538 D 243159 CDS YP_002427037.1 218668022 7134128 complement(2363056..2363622) 1 NC_011761.1 identified by similarity to SP:Q8XWV4; match to protein family HMM PF00692; match to protein family HMM TIGR02274; deoxycytidine triphosphate deaminase 2363622 dcd 7134128 dcd Acidithiobacillus ferrooxidans ATCC 23270 deoxycytidine triphosphate deaminase YP_002427037.1 2363056 R 243159 CDS YP_002427038.1 218665483 7134787 complement(2363652..2364728) 1 NC_011761.1 identified by similarity to SP:P21590; Mrp protein 2364728 mrp 7134787 mrp Acidithiobacillus ferrooxidans ATCC 23270 Mrp protein YP_002427038.1 2363652 R 243159 CDS YP_002427039.1 218667632 7135096 complement(2364743..2365057) 1 NC_011761.1 identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase family protein 2365057 7135096 AFE_2662 Acidithiobacillus ferrooxidans ATCC 23270 antibiotic biosynthesis monooxygenase family protein YP_002427039.1 2364743 R 243159 CDS YP_002427040.1 218665224 7135806 complement(2365087..2365917) 1 NC_011761.1 identified by similarity to SP:P04036; match to protein family HMM PF01113; match to protein family HMM PF03447; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase 2365917 dapB 7135806 dapB Acidithiobacillus ferrooxidans ATCC 23270 dihydrodipicolinate reductase YP_002427040.1 2365087 R 243159 CDS YP_002427041.1 218668004 7135712 complement(2365917..2367044) 1 NC_011761.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 2367044 dnaJ 7135712 dnaJ Acidithiobacillus ferrooxidans ATCC 23270 chaperone protein DnaJ YP_002427041.1 2365917 R 243159 CDS YP_002427042.1 218667915 7134768 complement(2367111..2369015) 1 NC_011761.1 identified by similarity to SP:P04475; match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein Dnak 2369015 dnaK 7134768 dnaK Acidithiobacillus ferrooxidans ATCC 23270 chaperone protein Dnak YP_002427042.1 2367111 R 243159 CDS YP_002427043.1 218667472 7135222 complement(2369061..2369576) 1 NC_011761.1 identified by similarity to SP:P09372; match to protein family HMM PF01025; co-chaperone GrpE 2369576 grpE 7135222 grpE Acidithiobacillus ferrooxidans ATCC 23270 co-chaperone GrpE YP_002427043.1 2369061 R 243159 CDS YP_002427044.1 218667895 7136764 complement(2369649..2370671) 1 NC_011761.1 identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA 2370671 hrcA 7136764 hrcA Acidithiobacillus ferrooxidans ATCC 23270 heat-inducible transcription repressor HrcA YP_002427044.1 2369649 R 243159 CDS YP_002427045.1 218665487 7135202 2370670..2370762 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2370762 7135202 AFE_2668 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427045.1 2370670 D 243159 CDS YP_002427046.1 218666791 7135100 complement(2370906..2371061) 1 NC_011761.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2371061 rpmG 7135100 rpmG Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L33 YP_002427046.1 2370906 R 243159 CDS YP_002427047.1 218667456 7137040 complement(2371072..2371308) 1 NC_011761.1 required for 70S ribosome assembly; 50S ribosomal protein L28 2371308 rpmB 7137040 rpmB Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L28 YP_002427047.1 2371072 R 243159 CDS YP_002427048.1 218666133 7136747 2371419..2373455 1 NC_011761.1 identified by similarity to SP:P00959; match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionyl-tRNA synthetase 2373455 metG 7136747 metG Acidithiobacillus ferrooxidans ATCC 23270 methionyl-tRNA synthetase YP_002427048.1 2371419 D 243159 CDS YP_002427049.1 218666823 7134033 complement(2373448..2374566) 1 NC_011761.1 identified by similarity to SP:P39912; match to protein family HMM PF00793; phospho-2-dehydro-3-deoxyheptonate aldolase 2374566 7134033 AFE_2671 Acidithiobacillus ferrooxidans ATCC 23270 phospho-2-dehydro-3-deoxyheptonate aldolase YP_002427049.1 2373448 R 243159 CDS YP_002427050.1 218667672 7137072 complement(2374645..2376018) 1 NC_011761.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00979; class II fumarate hydratase 2376018 fumC 7137072 fumC Acidithiobacillus ferrooxidans ATCC 23270 class II fumarate hydratase YP_002427050.1 2374645 R 243159 CDS YP_002427051.1 218666206 7135455 complement(2376020..2377816) 1 NC_011761.1 identified by similarity to SP:P94876; match to protein family HMM PF01432; match to protein family HMM PF08439; oligoendopeptidase F 2377816 7135455 AFE_2674 Acidithiobacillus ferrooxidans ATCC 23270 oligoendopeptidase F YP_002427051.1 2376020 R 243159 CDS YP_002427052.1 218665238 7136562 complement(2377860..2378348) 1 NC_011761.1 identified by similarity to GB:CAD84648.1; hypothetical protein 2378348 7136562 AFE_2675 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427052.1 2377860 R 243159 CDS YP_002427053.1 218665906 7135726 2378470..2380173 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2380173 7135726 AFE_2676 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427053.1 2378470 D 243159 CDS YP_002427054.1 218666150 7134116 complement(2380239..2380808) 1 NC_011761.1 identified by similarity to GB:AAO09303.1; 3-deoxy-D-manno-octulosonic-acid transferase 2380808 7134116 AFE_2677 Acidithiobacillus ferrooxidans ATCC 23270 3-deoxy-D-manno-octulosonic-acid transferase YP_002427054.1 2380239 R 243159 CDS YP_002427055.1 218666657 7134050 2380966..2382435 1 NC_011761.1 identified by similarity to SP:P08323; match to protein family HMM PF00534; match to protein family HMM PF08323; match to protein family HMM TIGR02095; glycogen synthase 2382435 glgA 7134050 glgA Acidithiobacillus ferrooxidans ATCC 23270 glycogen synthase YP_002427055.1 2380966 D 243159 CDS YP_002427056.1 218668042 7134528 2382476..2383864 1 NC_011761.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; metallo-beta-lactamase family protein 2383864 7134528 AFE_2679 Acidithiobacillus ferrooxidans ATCC 23270 metallo-beta-lactamase family protein YP_002427056.1 2382476 D 243159 CDS YP_002427057.1 218667312 7134807 2383948..2384364 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2384364 7134807 AFE_2680 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427057.1 2383948 D 243159 CDS YP_002427058.1 218665362 7135156 2384462..2385124 1 NC_011761.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 2385124 nth 7135156 nth Acidithiobacillus ferrooxidans ATCC 23270 endonuclease III YP_002427058.1 2384462 D 243159 CDS YP_002427059.1 218667728 7136144 complement(2385104..2387065) 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 2387065 7136144 AFE_2681 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427059.1 2385104 R 243159 CDS YP_002427060.1 218666676 7135511 complement(2387448..2387639) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2387639 7135511 AFE_2683 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427060.1 2387448 R 243159 CDS YP_002427061.1 218666423 7134547 2387677..2389797 1 NC_011761.1 identified by match to protein family HMM PF05658; match to protein family HMM PF05662; match to protein family HMM TIGR03304; hemagluttinin family protein 2389797 7134547 AFE_2684 Acidithiobacillus ferrooxidans ATCC 23270 hemagluttinin family protein YP_002427061.1 2387677 D 243159 CDS YP_002427062.1 218666977 7134369 2389908..2390459 1 NC_011761.1 identified by match to protein family HMM PF00691; OmpA family protein 2390459 7134369 AFE_2685 Acidithiobacillus ferrooxidans ATCC 23270 OmpA family protein YP_002427062.1 2389908 D 243159 CDS YP_002427063.1 218667899 7134840 complement(2390524..2391621) 1 NC_011761.1 identified by match to protein family HMM PF08238; hypothetical protein 2391621 7134840 AFE_2686 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427063.1 2390524 R 243159 CDS YP_002427064.1 218665771 7135206 2391839..2392426 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2392426 7135206 AFE_2687 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427064.1 2391839 D 243159 CDS YP_002427065.1 218665229 7136086 2392505..2392993 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2392993 7136086 AFE_2688 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427065.1 2392505 D 243159 CDS YP_002427066.1 218667176 7135717 complement(2392997..2393791) 1 NC_011761.1 TonB family protein 2393791 7135717 AFE_2689 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002427066.1 2392997 R 243159 CDS YP_002427067.1 218665683 7134725 complement(2393784..2395580) 1 NC_011761.1 identified by match to protein family HMM PF02321; type I secretion outer membrane protein 2395580 7134725 AFE_2690 Acidithiobacillus ferrooxidans ATCC 23270 type I secretion outer membrane protein YP_002427067.1 2393784 R 243159 CDS YP_002427068.1 218665564 7137166 complement(2395612..2395758) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2395758 7137166 AFE_2691 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427068.1 2395612 R 243159 CDS YP_002427069.1 218666271 7135936 complement(2395736..2397133) 1 NC_011761.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01843; HlyD family type I secretion membrane fusion protein 2397133 7135936 AFE_2692 Acidithiobacillus ferrooxidans ATCC 23270 HlyD family type I secretion membrane fusion protein YP_002427069.1 2395736 R 243159 CDS YP_002427070.1 218665057 7136628 complement(2397135..2399309) 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; match to protein family HMM TIGR01846; type I secretion system ATPase 2399309 7136628 AFE_2693 Acidithiobacillus ferrooxidans ATCC 23270 type I secretion system ATPase YP_002427070.1 2397135 R 243159 CDS YP_002427071.1 218666131 7134986 complement(2399306..2399944) 1 NC_011761.1 identified by similarity to GB:CAE32332.1; hypothetical protein 2399944 7134986 AFE_2694 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427071.1 2399306 R 243159 CDS YP_002427072.1 218666784 7134031 2399916..2400143 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2400143 7134031 AFE_2695 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427072.1 2399916 D 243159 CDS YP_002427073.1 218665634 7137280 complement(2400189..2401577) 1 NC_011761.1 identified by match to protein family HMM PF00158; match to protein family HMM PF02954; sigma-54 dependent transcriptional regulator 2401577 7137280 AFE_2696 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent transcriptional regulator YP_002427073.1 2400189 R 243159 CDS YP_002427074.1 218666515 7135578 complement(2401577..2403349) 1 NC_011761.1 identified by similarity to PIR:H83107; hypothetical protein 2403349 7135578 AFE_2697 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427074.1 2401577 R 243159 CDS YP_002427075.1 218666942 7136327 complement(2403333..2403944) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2403944 7136327 AFE_2698 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427075.1 2403333 R 243159 CDS YP_002427076.1 218667320 7134652 complement(2403941..2404780) 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; lipoprotein 2404780 7134652 AFE_2699 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427076.1 2403941 R 243159 CDS YP_002427077.1 218665047 7135164 complement(2404783..2405721) 1 NC_011761.1 identified by similarity to GB:AAL92472.1; match to protein family HMM PF00482; tight adherence protein TadC 2405721 tadC 7135164 tadC Acidithiobacillus ferrooxidans ATCC 23270 tight adherence protein TadC YP_002427077.1 2404783 R 243159 CDS YP_002427078.1 218666085 7134976 complement(2405729..2406670) 1 NC_011761.1 identified by similarity to GB:AAO10168.1; match to protein family HMM PF00482; tight adherence protein TadB 2406670 tadB 7134976 tadB Acidithiobacillus ferrooxidans ATCC 23270 tight adherence protein TadB YP_002427078.1 2405729 R 243159 CDS YP_002427079.1 218665747 7137006 complement(2406667..2408001) 1 NC_011761.1 identified by similarity to GB:AAN75211.1; match to protein family HMM PF00437; tight adherence protein TadA 2408001 tadA 7137006 tadA Acidithiobacillus ferrooxidans ATCC 23270 tight adherence protein TadA YP_002427079.1 2406667 R 243159 CDS YP_002427080.1 218666628 7136062 complement(2407998..2409227) 1 NC_011761.1 identified by similarity to GB:AAF40194.1; pilus assembly protein CpaE 2409227 7136062 AFE_2703 Acidithiobacillus ferrooxidans ATCC 23270 pilus assembly protein CpaE YP_002427080.1 2407998 R 243159 CDS YP_002427081.1 218666419 7134499 complement(2409224..2410660) 1 NC_011761.1 identified by match to protein family HMM PF00263; type II/III secretion system protein 2410660 7134499 AFE_2704 Acidithiobacillus ferrooxidans ATCC 23270 type II/III secretion system protein YP_002427081.1 2409224 R 243159 CDS YP_002427082.1 218667886 7134365 complement(2410674..2411645) 1 NC_011761.1 identified by similarity to GB:CAE32322.1; match to protein family HMM PF08666; match to protein family HMM TIGR03177; hypothetical protein 2411645 7134365 AFE_2705 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427082.1 2410674 R 243159 CDS YP_002427083.1 218666724 7136545 2411644..2411748 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2411748 7136545 AFE_2706 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427083.1 2411644 D 243159 CDS YP_002427084.1 218666040 7137219 complement(2411754..2412239) 1 NC_011761.1 identified by similarity to GB:CAE42273.1; match to protein family HMM PF07811; hypothetical protein 2412239 7137219 AFE_2707 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427084.1 2411754 R 243159 CDS YP_002427085.1 218665130 7136960 complement(2412248..2412691) 1 NC_011761.1 identified by match to protein family HMM PF01478; hypothetical protein 2412691 7136960 AFE_2708 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427085.1 2412248 R 243159 CDS YP_002427086.1 218667117 7134281 2413117..2414343 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 2414343 7134281 AFE_2709 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002427086.1 2413117 D 243159 CDS YP_002427087.1 218665735 7136717 complement(2414427..2414666) 1 NC_011761.1 identified by match to protein family HMM PF04964; pilin 2414666 7136717 AFE_2710 Acidithiobacillus ferrooxidans ATCC 23270 pilin YP_002427087.1 2414427 R 243159 CDS YP_002427088.1 218665670 7136050 complement(2414893..2416050) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2416050 7136050 AFE_2711 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427088.1 2414893 R 243159 CDS YP_002427089.1 218667397 7137153 2416116..2416568 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2416568 7137153 AFE_2712 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427089.1 2416116 D 243159 CDS YP_002427090.1 218666856 7136920 complement(2416675..2417049) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2417049 7136920 AFE_2713 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427090.1 2416675 R 243159 CDS YP_002427091.1 218665310 7137105 complement(2417016..2417330) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2417330 7137105 AFE_2714 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427091.1 2417016 R 243159 CDS YP_002427092.1 218668087 7136251 2417685..2418122 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2418122 7136251 AFE_2715 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002427092.1 2417685 D 243159 CDS YP_002427093.1 218666205 7136823 complement(2418150..2420438) 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF00685; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF07721; TPR domain/sulfotransferase domain-containing protein 2420438 7136823 AFE_2716 Acidithiobacillus ferrooxidans ATCC 23270 TPR domain/sulfotransferase domain-containing protein YP_002427093.1 2418150 R 243159 CDS YP_002427094.1 218666511 7136561 complement(2420539..2420940) 1 NC_011761.1 hypothetical protein 2420940 7136561 AFE_2717 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427094.1 2420539 R 243159 CDS YP_002427095.1 218667382 7136323 2421121..2422896 1 NC_011761.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 2422896 nrdD 7136323 nrdD Acidithiobacillus ferrooxidans ATCC 23270 anaerobic ribonucleoside triphosphate reductase YP_002427095.1 2421121 D 243159 CDS YP_002427096.1 218668073 7136904 2422916..2423122 1 NC_011761.1 identified by similarity to GB:AAP85991.1; hypothetical protein 2423122 7136904 AFE_2719 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427096.1 2422916 D 243159 CDS YP_002427097.1 218666984 7136809 2423151..2423852 1 NC_011761.1 identified by similarity to GB:CAA10042.1; match to protein family HMM PF04055; match to protein family HMM TIGR02495; anaerobic ribonucleoside-triphosphate reductase subunit beta 2423852 nrdG 7136809 nrdG Acidithiobacillus ferrooxidans ATCC 23270 anaerobic ribonucleoside-triphosphate reductase subunit beta YP_002427097.1 2423151 D 243159 CDS YP_002427098.1 218666075 7134847 complement(2423861..2425393) 1 NC_011761.1 identified by similarity to PIR:C70441; match to protein family HMM PF03099; lipoate-protein ligase A 2425393 7134847 AFE_2721 Acidithiobacillus ferrooxidans ATCC 23270 lipoate-protein ligase A YP_002427098.1 2423861 R 243159 CDS YP_002427099.1 218666623 7136995 complement(2425407..2426285) 1 NC_011761.1 identified by match to protein family HMM PF01136; U32 family peptidase 2426285 yhbV 7136995 yhbV Acidithiobacillus ferrooxidans ATCC 23270 U32 family peptidase YP_002427099.1 2425407 R 243159 CDS YP_002427100.1 218666116 7135354 complement(2426363..2427373) 1 NC_011761.1 identified by similarity to GB:AAQ61744.1; match to protein family HMM PF01136; U32 family peptidase 2427373 7135354 AFE_2723 Acidithiobacillus ferrooxidans ATCC 23270 U32 family peptidase YP_002427100.1 2426363 R 243159 CDS YP_002427101.1 218665408 7134015 complement(2427404..2428018) 1 NC_011761.1 identified by similarity to PIR:G83157; hypothetical protein 2428018 7134015 AFE_2724 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427101.1 2427404 R 243159 CDS YP_002427102.1 218668017 7136738 2429353..2429700 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2429700 7136738 AFE_2726 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427102.1 2429353 D 243159 CDS YP_002427103.1 218665625 7134782 2429913..2430566 1 NC_011761.1 identified by match to protein family HMM PF00034; cytochrome c4 2430566 cycA-2 7134782 cycA-2 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c4 YP_002427103.1 2429913 D 243159 CDS YP_002427104.1 218667418 7135568 2430572..2431381 1 NC_011761.1 identified by match to protein family HMM PF00106; short-chain dehydrogenase 2431381 sdr_2 7135568 sdr_2 Acidithiobacillus ferrooxidans ATCC 23270 short-chain dehydrogenase YP_002427104.1 2430572 D 243159 CDS YP_002427105.1 218667017 7136942 2431412..2432032 1 NC_011761.1 identified by match to protein family HMM PF00355; match to protein family HMM TIGR01409; match to protein family HMM TIGR01416; ubiquinol--cytochrome c reductase, iron-sulfur subunit 2432032 petA-2 7136942 petA-2 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, iron-sulfur subunit YP_002427105.1 2431412 D 243159 CDS YP_002427106.1 218665797 7134881 2432060..2433274 1 NC_011761.1 identified by similarity to SP:P23134; match to protein family HMM PF00032; match to protein family HMM PF00033; ubiquinol--cytochrome c reductase, cytochrome b subunit 2433274 petB-2 7134881 petB-2 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, cytochrome b subunit YP_002427106.1 2432060 D 243159 CDS YP_002427107.1 218667193 7136112 2433297..2433998 1 NC_011761.1 identified by match to protein family HMM PF02167; ubiquinol--cytochrome c reductase, cytochrome c1 subunit 2433998 petC-2 7136112 petC-2 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, cytochrome c1 subunit YP_002427107.1 2433297 D 243159 CDS YP_002427108.1 218666489 7135586 2434085..2434405 1 NC_011761.1 identified by similarity to SP:P50500; match to protein family HMM TIGR01409; iron oxidase 2434405 iro 7135586 iro Acidithiobacillus ferrooxidans ATCC 23270 iron oxidase YP_002427108.1 2434085 D 243159 CDS YP_002427109.1 218667416 7136299 2434579..2435031 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2435031 7136299 AFE_2733 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427109.1 2434579 D 243159 CDS YP_002427110.1 218668027 7136940 2435132..2435740 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2435740 7136940 AFE_2734 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427110.1 2435132 D 243159 CDS YP_002427111.1 218665397 7135997 complement(2435895..2436554) 1 NC_011761.1 identified by similarity to SP:P28692; match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J 2436554 rrmJ 7135997 rrmJ Acidithiobacillus ferrooxidans ATCC 23270 ribosomal RNA large subunit methyltransferase J YP_002427111.1 2435895 R 243159 CDS YP_002427112.1 218666681 7136179 2436644..2436928 1 NC_011761.1 identified by similarity to SP:P71376; match to protein family HMM PF01985; hypothetical protein 2436928 7136179 AFE_2737 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427112.1 2436644 D 243159 CDS YP_002427113.1 218666026 7134552 2437018..2437401 1 NC_011761.1 identified by match to protein family HMM PF04379; apaG protein 2437401 7134552 AFE_2738 Acidithiobacillus ferrooxidans ATCC 23270 apaG protein YP_002427113.1 2437018 D 243159 CDS YP_002427114.1 218667310 7134242 2437398..2438003 1 NC_011761.1 identified by similarity to SP:Q05197; match to protein family HMM PF08241; match to protein family HMM PF08242; phosphatidylethanolamine N-methyltransferase 2438003 7134242 AFE_2739 Acidithiobacillus ferrooxidans ATCC 23270 phosphatidylethanolamine N-methyltransferase YP_002427114.1 2437398 D 243159 CDS YP_002427115.1 218665904 7135154 complement(2438071..2439888) 1 NC_011761.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 2439888 typA 7135154 typA Acidithiobacillus ferrooxidans ATCC 23270 GTP-binding protein TypA YP_002427115.1 2438071 R 243159 CDS YP_002427116.1 218665555 7134114 complement(2440045..2441259) 1 NC_011761.1 identified by similarity to GB:CAA10107.1; match to protein family HMM PF07396; major outer membrane protein 40 2441259 omp40 7134114 omp40 Acidithiobacillus ferrooxidans ATCC 23270 major outer membrane protein 40 YP_002427116.1 2440045 R 243159 CDS YP_002427117.1 218666260 7136031 2441606..2442472 1 NC_011761.1 identified by similarity to SP:P08885; match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase 2442472 dapF 7136031 dapF Acidithiobacillus ferrooxidans ATCC 23270 diaminopimelate epimerase YP_002427117.1 2441606 D 243159 CDS YP_002427118.1 218666454 7136617 2442456..2442650 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2442650 7136617 AFE_2744 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427118.1 2442456 D 243159 CDS YP_002427119.1 218667201 7134400 2442651..2443334 1 NC_011761.1 identified by similarity to PIR:S61401; hypothetical protein 2443334 7134400 AFE_2745 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427119.1 2442651 D 243159 CDS YP_002427120.1 218667286 7135595 2443328..2444272 1 NC_011761.1 identified by similarity to SP:P22885; match to protein family HMM PF00589; match to protein family HMM PF02899; tyrosine recombinase XerC 2444272 xerC 7135595 xerC Acidithiobacillus ferrooxidans ATCC 23270 tyrosine recombinase XerC YP_002427120.1 2443328 D 243159 CDS YP_002427121.1 218667651 7135130 2444287..2444808 1 NC_011761.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 2444808 hslV 7135130 hslV Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent protease peptidase subunit YP_002427121.1 2444287 D 243159 CDS YP_002427122.1 218666220 7135825 2444811..2446133 1 NC_011761.1 identified by similarity to SP:P32168; match to protein family HMM PF07724; match to protein family HMM TIGR00390; heat shock protein HslVU, ATPase subunit HslU 2446133 hslU 7135825 hslU Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein HslVU, ATPase subunit HslU YP_002427122.1 2444811 D 243159 CDS YP_002427123.1 218666965 7136576 complement(2446156..2446488) 1 NC_011761.1 identified by similarity to PIR:D75566; match to protein family HMM PF08754; hypothetical protein 2446488 7136576 AFE_2749 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427123.1 2446156 R 243159 CDS YP_002427124.1 218667652 7134828 complement(2446485..2447345) 1 NC_011761.1 identified by similarity to SP:P00580; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02392; match to protein family HMM TIGR02937; RNA polymerase sigma-32 factor 2447345 rpoH 7134828 rpoH Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigma-32 factor YP_002427124.1 2446485 R 243159 CDS YP_002427125.1 218665172 7135826 complement(2447489..2448394) 1 NC_011761.1 identified by similarity to GB:AAK20882.1; match to protein family HMM PF02687; cell division protein FtsX 2448394 7135826 AFE_2751 Acidithiobacillus ferrooxidans ATCC 23270 cell division protein FtsX YP_002427125.1 2447489 R 243159 CDS YP_002427126.1 218665273 7134324 complement(2448391..2449062) 1 NC_011761.1 identified by similarity to GB:AAK20881.1; match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE 2449062 ftsE 7134324 ftsE Acidithiobacillus ferrooxidans ATCC 23270 cell division ATP-binding protein FtsE YP_002427126.1 2448391 R 243159 CDS YP_002427127.1 218666438 7136214 complement(2449059..2450009) 1 NC_011761.1 identified by similarity to SP:P10121; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 2450009 ftsY 7136214 ftsY Acidithiobacillus ferrooxidans ATCC 23270 signal recognition particle-docking protein FtsY YP_002427127.1 2449059 R 243159 CDS YP_002427128.1 218667593 7134384 2450213..2450782 1 NC_011761.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; methyltransferase 2450782 7134384 AFE_2754 Acidithiobacillus ferrooxidans ATCC 23270 methyltransferase YP_002427128.1 2450213 D 243159 CDS YP_002427129.1 218667845 7135765 2450775..2451299 1 NC_011761.1 identified by similarity to SP:P23875; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 2451299 coaD 7135765 coaD Acidithiobacillus ferrooxidans ATCC 23270 pantetheine-phosphate adenylyltransferase YP_002427129.1 2450775 D 243159 CDS YP_002427130.1 218667334 7134923 2451328..2451579 1 NC_011761.1 identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 2451579 7134923 AFE_2757 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein YP_002427130.1 2451328 D 243159 CDS YP_002427131.1 218668033 7135179 complement(2451563..2453542) 1 NC_011761.1 identified by similarity to PIR:F83597; hypothetical protein 2453542 7135179 AFE_2756 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427131.1 2451563 R 243159 CDS YP_002427132.1 218665209 7134798 complement(2453559..2454371) 1 NC_011761.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 2454371 mutM 7134798 mutM Acidithiobacillus ferrooxidans ATCC 23270 formamidopyrimidine-DNA glycosylase YP_002427132.1 2453559 R 243159 CDS YP_002427133.1 218665820 7135697 complement(2454374..2455240) 1 NC_011761.1 identified by match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03387; HemK family modification methylase 2455240 7135697 AFE_2759 Acidithiobacillus ferrooxidans ATCC 23270 HemK family modification methylase YP_002427133.1 2454374 R 243159 CDS YP_002427134.1 218665453 7135374 complement(2455230..2456327) 1 NC_011761.1 identified by similarity to SP:P07011; match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 2456327 prfA 7135374 prfA Acidithiobacillus ferrooxidans ATCC 23270 peptide chain release factor 1 YP_002427134.1 2455230 R 243159 CDS YP_002427135.1 218666021 7135065 complement(2456324..2457655) 1 NC_011761.1 identified by similarity to SP:P13580; match to protein family HMM PF00745; match to protein family HMM PF01488; match to protein family HMM PF05201; match to protein family HMM TIGR01035; glutamyl-tRNA reductase 2457655 hemA 7135065 hemA Acidithiobacillus ferrooxidans ATCC 23270 glutamyl-tRNA reductase YP_002427135.1 2456324 R 243159 CDS YP_002427136.1 218665177 7134237 2457560..2459371 1 NC_011761.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07721; hypothetical protein 2459371 7134237 AFE_2762 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427136.1 2457560 D 243159 CDS YP_002427137.1 218665696 7134329 2459368..2460024 1 NC_011761.1 identified by match to protein family HMM PF03550; match to protein family HMM TIGR00548; outer membrane lipoprotein LolB 2460024 7134329 AFE_2763 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane lipoprotein LolB YP_002427137.1 2459368 D 243159 CDS YP_002427138.1 218666772 7137179 2460021..2460866 1 NC_011761.1 identified by similarity to SP:P24209; match to protein family HMM PF00288; match to protein family HMM TIGR00154; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2460866 ispE 7137179 ispE Acidithiobacillus ferrooxidans ATCC 23270 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002427138.1 2460021 D 243159 CDS YP_002427139.1 218666291 7135837 2460994..2461941 1 NC_011761.1 identified by similarity to SP:P08330; match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase 2461941 prsA 7135837 prsA Acidithiobacillus ferrooxidans ATCC 23270 ribose-phosphate pyrophosphokinase YP_002427139.1 2460994 D 243159 CDS YP_002427140.1 218665601 7136028 complement(2462294..2462674) 1 NC_011761.1 transposase, degenerate 2462674 7136028 AFE_2768 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002427140.1 2462294 R 243159 CDS YP_002427141.1 218666374 7135544 complement(2462775..2464097) 1 NC_011761.1 identified by match to protein family HMM PF01396; match to protein family HMM PF04471; restriction endonuclease 2464097 7135544 AFE_2769 Acidithiobacillus ferrooxidans ATCC 23270 restriction endonuclease YP_002427141.1 2462775 R 243159 CDS YP_002427142.1 218665366 7136136 complement(2464656..2464895) 1 NC_011761.1 SpoVT/AbrB like domain-containing protein 2464895 7136136 AFE_2771 Acidithiobacillus ferrooxidans ATCC 23270 SpoVT/AbrB like domain-containing protein YP_002427142.1 2464656 R 243159 CDS YP_002427143.1 218666030 7136148 2465025..2465279 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2465279 7136148 AFE_2772 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427143.1 2465025 D 243159 CDS YP_002427144.1 218667871 7134246 complement(2465564..2466445) 1 NC_011761.1 identified by similarity to SP:Q46845; match to protein family HMM PF00043; match to protein family HMM PF02798; glutathione S-transferase 2466445 yghU 7134246 yghU Acidithiobacillus ferrooxidans ATCC 23270 glutathione S-transferase YP_002427144.1 2465564 R 243159 CDS YP_002427145.1 218666737 7136530 complement(2466545..2466787) 1 NC_011761.1 transposase, degenerate 2466787 7136530 AFE_2774 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002427145.1 2466545 R 243159 CDS YP_002427146.1 218668016 7137232 complement(2467094..2467879) 1 NC_011761.1 identified by match to protein family HMM PF01925; membrane protein 2467879 7137232 AFE_2775 Acidithiobacillus ferrooxidans ATCC 23270 membrane protein YP_002427146.1 2467094 R 243159 CDS YP_002427147.1 218666320 7134781 complement(2467945..2469552) 1 NC_011761.1 identified by similarity to SP:P20906; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; benzoylformate decarboxylase 2469552 7134781 AFE_2776 Acidithiobacillus ferrooxidans ATCC 23270 benzoylformate decarboxylase YP_002427147.1 2467945 R 243159 CDS YP_002427148.1 218666635 7136459 complement(2469780..2470400) 1 NC_011761.1 identified by similarity to GB:CAB62690.1; hypothetical protein 2470400 7136459 AFE_2777 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427148.1 2469780 R 243159 CDS YP_002427149.1 218668101 7134506 complement(2470432..2470734) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2470734 7134506 AFE_2778 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427149.1 2470432 R 243159 CDS YP_002427150.1 218666680 7136837 complement(2470925..2472949) 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-translocating P-type ATPase 2472949 7136837 AFE_2779 Acidithiobacillus ferrooxidans ATCC 23270 copper-translocating P-type ATPase YP_002427150.1 2470925 R 243159 CDS YP_002427151.1 218666592 7134551 2473228..2473620 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2473620 7134551 AFE_2780 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427151.1 2473228 D 243159 CDS YP_002427152.1 218665471 7136783 2474158..2474520 1 NC_011761.1 identified by similarity to SP:P77214; cation efflux system protein 2474520 7136783 AFE_2782 Acidithiobacillus ferrooxidans ATCC 23270 cation efflux system protein YP_002427152.1 2474158 D 243159 CDS YP_002427153.1 218667065 7135084 2474645..2474953 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2474953 7135084 AFE_2783 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427153.1 2474645 D 243159 CDS YP_002427154.1 218665326 7136665 2475367..2476227 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2476227 7136665 AFE_2784 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427154.1 2475367 D 243159 CDS YP_002427155.1 218666709 7136267 complement(2476508..2477662) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2477662 7136267 AFE_2785 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427155.1 2476508 R 243159 CDS YP_002427156.1 218667394 7137204 2477769..2477861 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2477861 7137204 AFE_2787 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427156.1 2477769 D 243159 CDS YP_002427157.1 218665338 7136917 complement(2477856..2478149) 1 NC_011761.1 transposase, degenerate 2478149 7136917 AFE_2786 Acidithiobacillus ferrooxidans ATCC 23270 transposase, degenerate YP_002427157.1 2477856 R 243159 CDS YP_002427158.1 218667034 7136119 2478570..2478923 1 NC_011761.1 identified by match to protein family HMM PF01906; hypothetical protein 2478923 7136119 AFE_2788 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427158.1 2478570 D 243159 CDS YP_002427159.1 218665065 7134899 complement(2479043..2479825) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2479825 7134899 AFE_2789 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427159.1 2479043 R 243159 CDS YP_002427160.1 218665978 7134994 complement(2480037..2483105) 1 NC_011761.1 identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; type I restriction-modification enzyme, R subunit 2483105 7134994 AFE_2790 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification enzyme, R subunit YP_002427160.1 2480037 R 243159 CDS YP_002427161.1 218667678 7134192 complement(2483875..2485131) 1 NC_011761.1 identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 2485131 7134192 AFE_2791 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system subunit S YP_002427161.1 2483875 R 243159 CDS YP_002427162.1 218667277 7135461 complement(2485271..2485492) 1 NC_011761.1 identified by similarity to PIR:A87339; hypothetical protein 2485492 7135461 AFE_2792 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427162.1 2485271 R 243159 CDS YP_002427163.1 218667614 7135120 complement(2485818..2487395) 1 NC_011761.1 identified by match to protein family HMM PF02384; type I restriction-modification system, M subunit 2487395 7135120 AFE_2793 Acidithiobacillus ferrooxidans ATCC 23270 type I restriction-modification system, M subunit YP_002427163.1 2485818 R 243159 CDS YP_002427164.1 218666547 7135788 2487482..2487904 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2487904 7135788 AFE_2794 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427164.1 2487482 D 243159 CDS YP_002427165.1 218665160 7136359 2488255..2488359 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2488359 7136359 AFE_2795 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427165.1 2488255 D 243159 CDS YP_002427166.1 218666927 7134312 complement(2488606..2489286) 1 NC_011761.1 ArsR family transcriptional regulator 2489286 7134312 AFE_2796 Acidithiobacillus ferrooxidans ATCC 23270 ArsR family transcriptional regulator YP_002427166.1 2488606 R 243159 CDS YP_002427167.1 218667978 7134637 2489396..2489806 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2489806 7134637 AFE_2797 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427167.1 2489396 D 243159 CDS YP_002427168.1 218667029 7134742 2489916..2490440 1 NC_011761.1 identified by similarity to SP:P09168; match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--protein-cysteine methyltransferase 2490440 ogt-1 7134742 ogt-1 Acidithiobacillus ferrooxidans ATCC 23270 methylated-DNA--protein-cysteine methyltransferase YP_002427168.1 2489916 D 243159 CDS YP_002427169.1 218665680 7134894 complement(2490478..2491968) 1 NC_011761.1 identified by similarity to SP:P04395; match to protein family HMM PF00165; match to protein family HMM PF00730; match to protein family HMM PF02805; match to protein family HMM PF06029; Ada family transcriptional regulator/DNA-3-methyladenine glycosylase II 2491968 7134894 AFE_2799 Acidithiobacillus ferrooxidans ATCC 23270 Ada family transcriptional regulator/DNA-3-methyladenine glycosylase II YP_002427169.1 2490478 R 243159 CDS YP_002427170.1 218667143 7137163 2492200..2492598 1 NC_011761.1 identified by match to protein family HMM PF00903; glyoxalase family protein 2492598 7137163 AFE_2800 Acidithiobacillus ferrooxidans ATCC 23270 glyoxalase family protein YP_002427170.1 2492200 D 243159 CDS YP_002427171.1 218666478 7134690 2492595..2493338 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short-chain dehydrogenase 2493338 7134690 AFE_2801 Acidithiobacillus ferrooxidans ATCC 23270 short-chain dehydrogenase YP_002427171.1 2492595 D 243159 CDS YP_002427172.1 218667876 7136288 2493412..2493741 1 NC_011761.1 identified by match to protein family HMM PF00893; SMR family multidrug resistance protein 2493741 7136288 AFE_2802 Acidithiobacillus ferrooxidans ATCC 23270 SMR family multidrug resistance protein YP_002427172.1 2493412 D 243159 CDS YP_002427173.1 218667116 7136535 2493794..2494336 1 NC_011761.1 identified by match to protein family HMM PF03358; FMN reductase, NADPH-dependent 2494336 7136535 AFE_2803 Acidithiobacillus ferrooxidans ATCC 23270 FMN reductase, NADPH-dependent YP_002427173.1 2493794 D 243159 CDS YP_002427174.1 218667811 7136716 2494340..2494819 1 NC_011761.1 identified by similarity to GB:AAQ59281.1; hypothetical protein 2494819 7136716 AFE_2804 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427174.1 2494340 D 243159 CDS YP_002427175.1 218665980 7134486 2494821..2495306 1 NC_011761.1 identified by similarity to GB:CAD16379.1; match to protein family HMM PF07883; hypothetical protein 2495306 7134486 AFE_2805 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427175.1 2494821 D 243159 CDS YP_002427176.1 218666391 7134194 2495317..2495964 1 NC_011761.1 identified by similarity to PIR:B83761; hypothetical protein 2495964 7134194 AFE_2806 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427176.1 2495317 D 243159 CDS YP_002427177.1 218665231 7134335 2495978..2496634 1 NC_011761.1 identified by match to protein family HMM PF04299; transcriptional regulator 2496634 7134335 AFE_2807 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002427177.1 2495978 D 243159 CDS YP_002427178.1 218665883 7135719 complement(2496676..2496870) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2496870 7135719 AFE_2808 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427178.1 2496676 R 243159 CDS YP_002427179.1 218667296 7135438 complement(2496917..2497018) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2497018 7135438 AFE_2809 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427179.1 2496917 R 243159 CDS YP_002427180.1 218668050 7135140 complement(2497006..2497188) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2497188 7135140 AFE_2810 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427180.1 2497006 R 243159 CDS YP_002427181.1 218665580 7134815 complement(2497202..2497507) 1 NC_011761.1 lipoprotein 2497507 7134815 AFE_2811 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427181.1 2497202 R 243159 CDS YP_002427182.1 218666264 7135522 complement(2497661..2497762) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2497762 7135522 AFE_2812 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427182.1 2497661 R 243159 CDS YP_002427183.1 218665834 7136621 complement(2497764..2497862) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2497862 7136621 AFE_2813 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427183.1 2497764 R 243159 CDS YP_002427184.1 218666909 7135388 2497935..2498489 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2498489 7135388 AFE_2814 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427184.1 2497935 D 243159 CDS YP_002427185.1 218667885 7134619 complement(2498521..2499861) 1 NC_011761.1 identified by similarity to SP:P15034; match to protein family HMM PF00557; match to protein family HMM PF05195; Xaa-Pro aminopeptidase 2499861 pepP 7134619 pepP Acidithiobacillus ferrooxidans ATCC 23270 Xaa-Pro aminopeptidase YP_002427185.1 2498521 R 243159 CDS YP_002427186.1 218665378 7136544 complement(2499984..2500424) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2500424 7136544 AFE_2816 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427186.1 2499984 R 243159 CDS YP_002427187.1 218666573 7136160 complement(2500594..2501952) 1 NC_011761.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2501952 radA 7136160 radA Acidithiobacillus ferrooxidans ATCC 23270 DNA repair protein RadA YP_002427187.1 2500594 R 243159 CDS YP_002427188.1 218666734 7135303 complement(2501949..2503043) 1 NC_011761.1 identified by similarity to SP:P29743; match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 2503043 alr 7135303 alr Acidithiobacillus ferrooxidans ATCC 23270 alanine racemase YP_002427188.1 2501949 R 243159 CDS YP_002427189.1 218665389 7137229 complement(2503130..2504503) 1 NC_011761.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 2504503 dnaB 7137229 dnaB Acidithiobacillus ferrooxidans ATCC 23270 replicative DNA helicase YP_002427189.1 2503130 R 243159 CDS YP_002427190.1 218666050 7136171 complement(2504518..2504964) 1 NC_011761.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2504964 rplI 7136171 rplI Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L9 YP_002427190.1 2504518 R 243159 CDS YP_002427191.1 218666921 7136970 complement(2505002..2505583) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2505583 7136970 AFE_2821 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427191.1 2505002 R 243159 CDS YP_002427192.1 218665813 7134631 complement(2505559..2505915) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2505915 7134631 AFE_2822 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427192.1 2505559 R 243159 CDS YP_002427193.1 218666634 7135367 complement(2505931..2506209) 1 NC_011761.1 identified by similarity to SP:P02374; match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 2506209 rpS18 7135367 rpS18 Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S18 YP_002427193.1 2505931 R 243159 CDS YP_002427194.1 218666120 7134505 complement(2506226..2506630) 1 NC_011761.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2506630 rpsF 7134505 rpsF Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S6 YP_002427194.1 2506226 R 243159 CDS YP_002427195.1 218665283 7134019 complement(2506755..2507819) 1 NC_011761.1 identified by similarity to SP:P75949; match to protein family HMM PF00933; beta-hexosaminidase 2507819 nagZ 7134019 nagZ Acidithiobacillus ferrooxidans ATCC 23270 beta-hexosaminidase YP_002427195.1 2506755 R 243159 CDS YP_002427196.1 218666498 7136224 complement(2507803..2509944) 1 NC_011761.1 hypothetical protein 2509944 7136224 AFE_2826 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427196.1 2507803 R 243159 CDS YP_002427197.1 218666684 7136310 complement(2509945..2510499) 1 NC_011761.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG family protein 2510499 7136310 AFE_2827 Acidithiobacillus ferrooxidans ATCC 23270 ErfK/YbiS/YcfS/YnhG family protein YP_002427197.1 2509945 R 243159 CDS YP_002427198.1 218667266 7134555 complement(2510468..2511790) 1 NC_011761.1 identified by similarity to SP:P55135; match to protein family HMM PF01938; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase 2511790 rumA 7134555 rumA Acidithiobacillus ferrooxidans ATCC 23270 23S rRNA (uracil-5-)-methyltransferase YP_002427198.1 2510468 R 243159 CDS YP_002427199.1 218666982 7135661 complement(2511765..2512574) 1 NC_011761.1 identified by similarity to PIR:H81856; hypothetical protein 2512574 7135661 AFE_2829 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427199.1 2511765 R 243159 CDS YP_002427200.1 218665745 7134845 complement(2512583..2513011) 1 NC_011761.1 identified by similarity to GB:CAD85351.1; hypothetical protein 2513011 7134845 AFE_2830 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427200.1 2512583 R 243159 CDS YP_002427201.1 218666602 7136060 complement(2513281..2515320) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2515320 7136060 AFE_2831 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427201.1 2513281 R 243159 CDS YP_002427202.1 218667639 7135333 complement(2515346..2516230) 1 NC_011761.1 identified by similarity to SP:P16703; match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01138; cysteine synthase B 2516230 cysM 7135333 cysM Acidithiobacillus ferrooxidans ATCC 23270 cysteine synthase B YP_002427202.1 2515346 R 243159 CDS YP_002427203.1 218666038 7135813 2516336..2517046 1 NC_011761.1 identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase 2517046 pgl 7135813 pgl Acidithiobacillus ferrooxidans ATCC 23270 6-phosphogluconolactonase YP_002427203.1 2516336 D 243159 CDS YP_002427204.1 218666248 7136958 complement(2517120..2518058) 1 NC_011761.1 identified by match to protein family HMM PF01145; hypothetical protein 2518058 7136958 AFE_2834 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427204.1 2517120 R 243159 CDS YP_002427205.1 218665967 7136605 complement(2518034..2518495) 1 NC_011761.1 identified by match to protein family HMM PF01957; hypothetical protein 2518495 7136605 AFE_2835 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427205.1 2518034 R 243159 CDS YP_002427206.1 218667749 7134180 complement(2518511..2520709) 1 NC_011761.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM TIGR01515; 1,4-alpha-glucan-branching protein 2520709 glgB 7134180 glgB Acidithiobacillus ferrooxidans ATCC 23270 1,4-alpha-glucan-branching protein YP_002427206.1 2518511 R 243159 CDS YP_002427207.1 218666300 7134423 complement(2520663..2520866) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2520866 7134423 AFE_2837 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427207.1 2520663 R 243159 CDS YP_002427208.1 218666853 7137308 2520952..2522259 1 NC_011761.1 identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; glucose-1-phosphate adenylyltransferase 2522259 glgC 7137308 glgC Acidithiobacillus ferrooxidans ATCC 23270 glucose-1-phosphate adenylyltransferase YP_002427208.1 2520952 D 243159 CDS YP_002427209.1 218667587 7137102 2522265..2523971 1 NC_011761.1 identified by match to protein family HMM PF03065; glycoside hydrolase 2523971 7137102 AFE_2839 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002427209.1 2522265 D 243159 CDS YP_002427210.1 218665396 7135758 2523968..2525986 1 NC_011761.1 identified by match to protein family HMM PF03065; match to protein family HMM PF09095; glycoside hydrolase 2525986 7135758 AFE_2840 Acidithiobacillus ferrooxidans ATCC 23270 glycoside hydrolase YP_002427210.1 2523968 D 243159 CDS YP_002427211.1 218665671 7136178 2525979..2526926 1 NC_011761.1 identified by match to protein family HMM PF00480; ROK family protein 2526926 7136178 AFE_2841 Acidithiobacillus ferrooxidans ATCC 23270 ROK family protein YP_002427211.1 2525979 D 243159 CDS YP_002427212.1 218666518 7137154 2526926..2527735 1 NC_011761.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 2527735 murI 7137154 murI Acidithiobacillus ferrooxidans ATCC 23270 glutamate racemase YP_002427212.1 2526926 D 243159 CDS YP_002427213.1 218667619 7136330 complement(2527748..2529040) 1 NC_011761.1 identified by similarity to GB:AAM41637.1; match to protein family HMM PF04286; hypothetical protein 2529040 7136330 AFE_2843 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427213.1 2527748 R 243159 CDS YP_002427214.1 218667923 7135793 2529207..2529395 1 NC_011761.1 hypothetical protein 2529395 7135793 AFE_2844 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427214.1 2529207 D 243159 CDS YP_002427215.1 218666108 7135230 complement(2529538..2530008) 1 NC_011761.1 identified by similarity to SP:P28046; match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein 2530008 ssb-1 7135230 ssb-1 Acidithiobacillus ferrooxidans ATCC 23270 single-strand binding protein YP_002427215.1 2529538 R 243159 CDS YP_002427216.1 218667043 7137029 2530095..2532899 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 2532899 uvrA 7137029 uvrA Acidithiobacillus ferrooxidans ATCC 23270 excinuclease ABC subunit A YP_002427216.1 2530095 D 243159 CDS YP_002427217.1 218665886 7136643 complement(2532872..2533612) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2533612 7136643 AFE_2846 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427217.1 2532872 R 243159 CDS YP_002427218.1 218666652 7134096 2533634..2534503 1 NC_011761.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 2534503 7134096 AFE_2848 Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin YP_002427218.1 2533634 D 243159 CDS YP_002427219.1 218667816 7134523 2534640..2536160 1 NC_011761.1 identified by similarity to GB:AAN67052.1; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; serine protease, DO/DeqQ family 2536160 7134523 AFE_2849 Acidithiobacillus ferrooxidans ATCC 23270 serine protease, DO/DeqQ family YP_002427219.1 2534640 D 243159 CDS YP_002427220.1 218667700 7134491 complement(2536180..2537088) 1 NC_011761.1 identified by similarity to SP:P21891; match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD 2537088 xerD 7134491 xerD Acidithiobacillus ferrooxidans ATCC 23270 tyrosine recombinase XerD YP_002427220.1 2536180 R 243159 CDS YP_002427221.1 218667147 7135483 complement(2537140..2538348) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2538348 7135483 AFE_2851 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427221.1 2537140 R 243159 CDS YP_002427222.1 218665038 7134694 complement(2538390..2538734) 1 NC_011761.1 identified by similarity to SP:P02420; match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 2538734 rplS 7134694 rplS Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L19 YP_002427222.1 2538390 R 243159 CDS YP_002427223.1 218666832 7134967 complement(2538757..2539500) 1 NC_011761.1 identified by similarity to SP:P07020; match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N1)-methyltransferase 2539500 trmD 7134967 trmD Acidithiobacillus ferrooxidans ATCC 23270 tRNA (guanine-N1)-methyltransferase YP_002427223.1 2538757 R 243159 CDS YP_002427224.1 218665436 7137081 complement(2539500..2540015) 1 NC_011761.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 2540015 rimM 7137081 rimM Acidithiobacillus ferrooxidans ATCC 23270 16S rRNA processing protein RimM YP_002427224.1 2539500 R 243159 CDS YP_002427225.1 218667997 7135048 complement(2539999..2540259) 1 NC_011761.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 2540259 rpsP 7135048 rpsP Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S16 YP_002427225.1 2539999 R 243159 CDS YP_002427226.1 218665204 7134761 complement(2540330..2541706) 1 NC_011761.1 identified by similarity to SP:P07019; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 2541706 ffh 7134761 ffh Acidithiobacillus ferrooxidans ATCC 23270 signal recognition particle protein YP_002427226.1 2540330 R 243159 CDS YP_002427227.1 218665732 7135692 complement(2541813..2542526) 1 NC_011761.1 identified by similarity to GB:AAF69240.1; match to protein family HMM PF03358; match to protein family HMM TIGR02690; arsenical resistance protein ArsH 2542526 arsH 7135692 arsH Acidithiobacillus ferrooxidans ATCC 23270 arsenical resistance protein ArsH YP_002427227.1 2541813 R 243159 CDS YP_002427228.1 218665647 7136047 complement(2542541..2543851) 1 NC_011761.1 identified by similarity to GB:AAF69238.1; match to protein family HMM PF02040; match to protein family HMM PF03600; match to protein family HMM TIGR00935; arsenical pump membrane protein 2543851 arsB 7136047 arsB Acidithiobacillus ferrooxidans ATCC 23270 arsenical pump membrane protein YP_002427228.1 2542541 R 243159 CDS YP_002427229.1 218667512 7137130 2543945..2544301 1 NC_011761.1 identified by match to protein family HMM PF01022; transcriptional regulator ArsR 2544301 arsR 7137130 arsR Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator ArsR YP_002427229.1 2543945 D 243159 CDS YP_002427230.1 218667044 7136377 2544301..2544792 1 NC_011761.1 identified by similarity to GB:AAF69239.1; match to protein family HMM PF01451; arsenate reductase 2544792 arsC 7136377 arsC Acidithiobacillus ferrooxidans ATCC 23270 arsenate reductase YP_002427230.1 2544301 D 243159 CDS YP_002427231.1 218666433 7136644 2545040..2546077 1 NC_011761.1 identified by match to protein family HMM PF00529; secretion protein, HlyD family 2546077 7136644 AFE_2861 Acidithiobacillus ferrooxidans ATCC 23270 secretion protein, HlyD family YP_002427231.1 2545040 D 243159 CDS YP_002427232.1 218667686 7134379 2546081..2547859 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2547859 7134379 AFE_2862 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002427232.1 2546081 D 243159 CDS YP_002427233.1 218665966 7135469 2547856..2548971 1 NC_011761.1 identified by similarity to SP:P75775; match to protein family HMM PF01061; ABC transporter permease 2548971 7135469 AFE_2863 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002427233.1 2547856 D 243159 CDS YP_002427234.1 218665119 7134179 2548971..2550080 1 NC_011761.1 identified by similarity to SP:P75774; match to protein family HMM PF01061; ABC transporter permease 2550080 7134179 AFE_2864 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease YP_002427234.1 2548971 D 243159 CDS YP_002427235.1 218666872 7134270 2550043..2550432 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2550432 7134270 AFE_2865 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427235.1 2550043 D 243159 CDS YP_002427236.1 218667980 7134582 complement(2550444..2550725) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2550725 7134582 AFE_2866 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427236.1 2550444 R 243159 CDS YP_002427237.1 218665267 7134744 complement(2550953..2551216) 1 NC_011761.1 thioredoxin family protein 2551216 7134744 AFE_2867 Acidithiobacillus ferrooxidans ATCC 23270 thioredoxin family protein YP_002427237.1 2550953 R 243159 CDS YP_002427238.1 218667497 7136208 2551275..2551736 1 NC_011761.1 identified by similarity to PIR:D70379; match to protein family HMM PF01814; hypothetical protein 2551736 7136208 AFE_2868 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427238.1 2551275 D 243159 CDS YP_002427239.1 218665290 7136362 2551729..2552175 1 NC_011761.1 identified by similarity to SP:P23884; match to protein family HMM PF01597; glycine cleavage system H protein 2552175 7136362 AFE_2869 Acidithiobacillus ferrooxidans ATCC 23270 glycine cleavage system H protein YP_002427239.1 2551729 D 243159 CDS YP_002427240.1 218667279 7136231 complement(2552221..2552730) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2552730 7136231 AFE_2870 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427240.1 2552221 R 243159 CDS YP_002427241.1 218665759 7135122 complement(2552735..2552845) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2552845 7135122 AFE_2871 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427241.1 2552735 R 243159 CDS YP_002427242.1 218665755 7136074 complement(2553045..2553479) 1 NC_011761.1 identified by similarity to GB:CAD77926.1; match to protein family HMM PF02643; hypothetical protein 2553479 7136074 AFE_2872 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427242.1 2553045 R 243159 CDS YP_002427243.1 218667832 7136070 complement(2555038..2555226) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2555226 7136070 AFE_2873 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427243.1 2555038 R 243159 CDS YP_002427244.1 218667141 7134910 complement(2555494..2555601) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2555601 7134910 AFE_2874 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427244.1 2555494 R 243159 CDS YP_002427245.1 218665299 7134688 complement(2555628..2556551) 1 NC_011761.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 2556551 7134688 AFE_2875 Acidithiobacillus ferrooxidans ATCC 23270 LysR family transcriptional regulator YP_002427245.1 2555628 R 243159 CDS YP_002427246.1 218665247 7136240 2556664..2557287 1 NC_011761.1 identified by similarity to GB:AAM72097.1; hypothetical protein 2557287 7136240 AFE_2876 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427246.1 2556664 D 243159 CDS YP_002427247.1 218665523 7135736 2558049..2558165 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2558165 7135736 AFE_2878 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427247.1 2558049 D 243159 CDS YP_002427248.1 218667806 7135894 complement(2558152..2560263) 1 NC_011761.1 identified by similarity to SP:P76393; hypothetical protein 2560263 7135894 AFE_2877 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427248.1 2558152 R 243159 CDS YP_002427249.1 218666424 7134481 complement(2560260..2561024) 1 NC_011761.1 identified by similarity to SP:P76395; hypothetical protein 2561024 7134481 AFE_2879 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427249.1 2560260 R 243159 CDS YP_002427250.1 218665977 7134370 complement(2561031..2561708) 1 NC_011761.1 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 2561708 7134370 AFE_2880 Acidithiobacillus ferrooxidans ATCC 23270 von Willebrand factor type A domain-containing protein YP_002427250.1 2561031 R 243159 CDS YP_002427251.1 218667172 7134698 complement(2562800..2563726) 1 NC_011761.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00758; uracil-DNA glycosylase 2563726 7134698 AFE_2882 Acidithiobacillus ferrooxidans ATCC 23270 uracil-DNA glycosylase YP_002427251.1 2562800 R 243159 CDS YP_002427252.1 218667449 7134721 2563893..2564963 1 NC_011761.1 identified by similarity to SP:P54965; match to protein family HMM PF02275; choloylglycine hydrolase 2564963 7134721 AFE_2883 Acidithiobacillus ferrooxidans ATCC 23270 choloylglycine hydrolase YP_002427252.1 2563893 D 243159 CDS YP_002427253.1 218667396 7136740 complement(2564977..2565123) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2565123 7136740 AFE_2884 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427253.1 2564977 R 243159 CDS YP_002427254.1 218665972 7136919 complement(2565176..2565559) 1 NC_011761.1 identified by similarity to SP:P13976; match to protein family HMM PF02452; PemK family protein 2565559 7136919 AFE_2885 Acidithiobacillus ferrooxidans ATCC 23270 PemK family protein YP_002427254.1 2565176 R 243159 CDS YP_002427255.1 218668170 7134185 complement(2565556..2565807) 1 NC_011761.1 identified by similarity to SP:P18534; match to protein family HMM PF04014; PemI family protein 2565807 7134185 AFE_2886 Acidithiobacillus ferrooxidans ATCC 23270 PemI family protein YP_002427255.1 2565556 R 243159 CDS YP_002427256.1 218666653 7135989 2565965..2566708 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2566708 7135989 AFE_2887 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427256.1 2565965 D 243159 CDS YP_002427257.1 218666880 7134524 complement(2566811..2567227) 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 2567227 7134524 AFE_2888 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002427257.1 2566811 R 243159 CDS YP_002427258.1 218666996 7134590 complement(2567214..2567447) 1 NC_011761.1 identified by match to protein family HMM PF04014; AbrB family transcriptional regulator 2567447 7134590 AFE_2889 Acidithiobacillus ferrooxidans ATCC 23270 AbrB family transcriptional regulator YP_002427258.1 2567214 R 243159 CDS YP_002427259.1 218666183 7134859 2567446..2567706 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2567706 7134859 AFE_2890 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427259.1 2567446 D 243159 CDS YP_002427260.1 218667570 7134084 2567803..2568153 1 NC_011761.1 identified by similarity to GB:AAM41875.1; hypothetical protein 2568153 7134084 AFE_2891 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427260.1 2567803 D 243159 CDS YP_002427261.1 218666239 7136436 2568250..2570112 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02463; ABC transporter ATP-binding protein 2570112 7136436 AFE_2893 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002427261.1 2568250 D 243159 CDS YP_002427262.1 218667221 7136596 complement(2570109..2570411) 1 NC_011761.1 identified by similarity to PIR:A95333; hypothetical protein 2570411 7136596 AFE_2892 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427262.1 2570109 R 243159 CDS YP_002427263.1 218665875 7135615 complement(2570425..2570688) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2570688 7135615 AFE_2894 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427263.1 2570425 R 243159 CDS YP_002427264.1 218668136 7135430 complement(2570733..2572487) 1 NC_011761.1 identified by similarity to SP:P04286; match to protein family HMM PF00905; match to protein family HMM PF03717; peptidoglycan synthetase FtsI 2572487 7135430 AFE_2895 Acidithiobacillus ferrooxidans ATCC 23270 peptidoglycan synthetase FtsI YP_002427264.1 2570733 R 243159 CDS YP_002427265.1 218666154 7135955 complement(2572636..2574696) 1 NC_011761.1 identified by match to protein family HMM PF04932; O-antigen polymerase family protein 2574696 7135955 AFE_2896 Acidithiobacillus ferrooxidans ATCC 23270 O-antigen polymerase family protein YP_002427265.1 2572636 R 243159 CDS YP_002427266.1 218667545 7134054 complement(2574693..2574926) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2574926 7134054 AFE_2897 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427266.1 2574693 R 243159 CDS YP_002427267.1 218665678 7135839 complement(2575100..2576068) 1 NC_011761.1 identified by similarity to SP:P19641; match to protein family HMM PF00348; octaprenyl-diphosphate synthase 2576068 ispB 7135839 ispB Acidithiobacillus ferrooxidans ATCC 23270 octaprenyl-diphosphate synthase YP_002427267.1 2575100 R 243159 CDS YP_002427268.1 218666501 7137161 complement(2576177..2577133) 1 NC_011761.1 identified by similarity to GB:AAC41400.1; hypothetical protein 2577133 7137161 AFE_2900 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427268.1 2576177 R 243159 CDS YP_002427269.1 218667003 7136313 complement(2577223..2578629) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR01818; nitrogen regulation protein NR(I) 2578629 ntrC 7136313 ntrC Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulation protein NR(I) YP_002427269.1 2577223 R 243159 CDS YP_002427270.1 218667969 7134866 complement(2578626..2579711) 1 NC_011761.1 identified by similarity to SP:P06218; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; nitrogen regulation protein NR(II) 2579711 ntrB 7134866 ntrB Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulation protein NR(II) YP_002427270.1 2578626 R 243159 CDS YP_002427271.1 218666955 7135276 2580021..2580791 1 NC_011761.1 identified by similarity to PIR:F83429; hypothetical protein 2580791 7135276 AFE_2903 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427271.1 2580021 D 243159 CDS YP_002427272.1 218668091 7134818 2580788..2580985 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2580985 7134818 AFE_2904 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427272.1 2580788 D 243159 CDS YP_002427273.1 218666287 7136827 2581107..2582570 1 NC_011761.1 identified by similarity to SP:Q55587; match to protein family HMM PF04169; match to protein family HMM PF04174; hypothetical protein 2582570 7136827 AFE_2905 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427273.1 2581107 D 243159 CDS YP_002427274.1 218667677 7137295 2582555..2583541 1 NC_011761.1 identified by similarity to GB:CAE19498.1; match to protein family HMM PF04168; hypothetical protein 2583541 7137295 AFE_2906 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427274.1 2582555 D 243159 CDS YP_002427275.1 218667395 7135460 2583581..2586943 1 NC_011761.1 identified by match to protein family HMM PF01841; match to protein family HMM PF08379; transglutaminase 2586943 7135460 AFE_2907 Acidithiobacillus ferrooxidans ATCC 23270 transglutaminase YP_002427275.1 2583581 D 243159 CDS YP_002427276.1 218665425 7136918 complement(2587096..2587233) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2587233 7136918 AFE_2908 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427276.1 2587096 R 243159 CDS YP_002427277.1 218666285 7135037 2587401..2589335 1 NC_011761.1 identified by match to protein family HMM PF06798; match to protein family HMM PF08298; hypothetical protein 2589335 7135037 AFE_2910 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427277.1 2587401 D 243159 CDS YP_002427278.1 218665241 7137293 complement(2589332..2589466) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2589466 7137293 AFE_2909 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427278.1 2589332 R 243159 CDS YP_002427279.1 218665827 7135730 2589616..2590932 1 NC_011761.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 2590932 amt-2 7135730 amt-2 Acidithiobacillus ferrooxidans ATCC 23270 ammonium transporter YP_002427279.1 2589616 D 243159 CDS YP_002427280.1 218665391 7135381 2591034..2592338 1 NC_011761.1 identified by similarity to SP:Q8Z6E7; match to protein family HMM PF04285; hypothetical protein 2592338 7135381 AFE_2912 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427280.1 2591034 D 243159 CDS YP_002427281.1 218667075 7136173 2592331..2593806 1 NC_011761.1 identified by match to protein family HMM PF04293; SpoVR family protein 2593806 7136173 AFE_2913 Acidithiobacillus ferrooxidans ATCC 23270 SpoVR family protein YP_002427281.1 2592331 D 243159 CDS YP_002427282.1 218666541 7136675 2593988..2595160 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2595160 7136675 AFE_2914 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427282.1 2593988 D 243159 CDS YP_002427283.1 218668110 7136353 2595214..2595552 1 NC_011761.1 identified by similarity to SP:P38504; match to protein family HMM PF00543; nitrogen regulatory protein P-II 2 2595552 glnK-1 7136353 glnK-1 Acidithiobacillus ferrooxidans ATCC 23270 nitrogen regulatory protein P-II 2 YP_002427283.1 2595214 D 243159 CDS YP_002427284.1 218666249 7136847 2595607..2596911 1 NC_011761.1 identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 2596911 amt-1 7136847 amt-1 Acidithiobacillus ferrooxidans ATCC 23270 ammonium transporter YP_002427284.1 2595607 D 243159 CDS YP_002427285.1 218666137 7136606 2597010..2597723 1 NC_011761.1 identified by match to protein family HMM PF00117; glutamine amidotransferase class-I domain-containing protein 2597723 7136606 AFE_2917 Acidithiobacillus ferrooxidans ATCC 23270 glutamine amidotransferase class-I domain-containing protein YP_002427285.1 2597010 D 243159 CDS YP_002427286.1 218667501 7134037 complement(2597728..2598114) 1 NC_011761.1 lipoprotein 2598114 7134037 AFE_2918 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427286.1 2597728 R 243159 CDS YP_002427287.1 218667787 7136366 2598362..2598733 1 NC_011761.1 identified by match to protein family HMM PF05433; lipoprotein 2598733 7136366 AFE_2919 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427287.1 2598362 D 243159 CDS YP_002427288.1 218668015 7134462 2599051..2600136 1 NC_011761.1 identified by similarity to SP:P10100; match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A 2600136 7134462 AFE_2921 Acidithiobacillus ferrooxidans ATCC 23270 rare lipoprotein A YP_002427288.1 2599051 D 243159 CDS YP_002427289.1 218668026 7134780 complement(2600117..2600416) 1 NC_011761.1 identified by similarity to GB:AAM72618.1; hypothetical protein 2600416 7134780 AFE_2920 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427289.1 2600117 R 243159 CDS YP_002427290.1 218667655 7134791 complement(2600422..2601648) 1 NC_011761.1 identified by similarity to SP:P31069; match to protein family HMM PF02254; match to protein family HMM PF07885; voltage-gated potassium channel 2601648 7134791 AFE_2922 Acidithiobacillus ferrooxidans ATCC 23270 voltage-gated potassium channel YP_002427290.1 2600422 R 243159 CDS YP_002427291.1 218666161 7135829 complement(2601850..2603019) 1 NC_011761.1 identified by similarity to SP:P08506; match to protein family HMM PF00768; D-alanyl-D-alanine carboxypeptidase 2603019 7135829 AFE_2923 Acidithiobacillus ferrooxidans ATCC 23270 D-alanyl-D-alanine carboxypeptidase YP_002427291.1 2601850 R 243159 CDS YP_002427292.1 218668003 7134061 complement(2603131..2604750) 1 NC_011761.1 identified by similarity to SP:P11537; match to protein family HMM PF00342; glucose-6-phosphate isomerase 2604750 pgi 7134061 pgi Acidithiobacillus ferrooxidans ATCC 23270 glucose-6-phosphate isomerase YP_002427292.1 2603131 R 243159 CDS YP_002427293.1 218667120 7134767 2605194..2606885 1 NC_011761.1 identified by match to protein family HMM PF02366; dolichyl-phosphate-mannose-protein mannosyltransferase family protein 2606885 7134767 AFE_2925 Acidithiobacillus ferrooxidans ATCC 23270 dolichyl-phosphate-mannose-protein mannosyltransferase family protein YP_002427293.1 2605194 D 243159 CDS YP_002427294.1 218668023 7134666 2606999..2607376 1 NC_011761.1 identified by match to protein family HMM PF02537; crcB protein 2607376 7134666 AFE_2926 Acidithiobacillus ferrooxidans ATCC 23270 crcB protein YP_002427294.1 2606999 D 243159 CDS YP_002427295.1 218667305 7134788 2607387..2607704 1 NC_011761.1 identified by similarity to GB:AAO90530.1; match to protein family HMM PF02641; hypothetical protein 2607704 7134788 AFE_2927 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427295.1 2607387 D 243159 CDS YP_002427296.1 218667636 7135149 2607813..2608676 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2608676 7135149 AFE_2928 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427296.1 2607813 D 243159 CDS YP_002427297.1 218666884 7135810 2608778..2610037 1 NC_011761.1 identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242; cyclopropane-fatty-acyl-phospholipid synthase 2610037 cfa 7135810 cfa Acidithiobacillus ferrooxidans ATCC 23270 cyclopropane-fatty-acyl-phospholipid synthase YP_002427297.1 2608778 D 243159 CDS YP_002427298.1 218667842 7134594 2610131..2610712 1 NC_011761.1 identified by similarity to GB:AAO81141.1; match to protein family HMM PF06736; hypothetical protein 2610712 7134594 AFE_2930 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427298.1 2610131 D 243159 CDS YP_002427299.1 218667219 7134920 2610843..2614235 1 NC_011761.1 identified by match to protein family HMM PF04257; match to protein family HMM TIGR01450; exodeoxyribonuclease V subunit gamma 2614235 recC 7134920 recC Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease V subunit gamma YP_002427299.1 2610843 D 243159 CDS YP_002427300.1 218666658 7135613 2614232..2617828 1 NC_011761.1 identified by match to protein family HMM PF00580; match to protein family HMM TIGR00609; exodeoxyribonuclease V subunit beta 2617828 recB 7135613 recB Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease V subunit beta YP_002427300.1 2614232 D 243159 CDS YP_002427301.1 218665442 7134529 2617837..2619777 1 NC_011761.1 identified by match to protein family HMM TIGR01447; exodeoxyribonuclease V subunit alpha 2619777 recD 7134529 recD Acidithiobacillus ferrooxidans ATCC 23270 exodeoxyribonuclease V subunit alpha YP_002427301.1 2617837 D 243159 CDS YP_002427302.1 218666464 7135054 2620110..2620874 1 NC_011761.1 identified by match to protein family HMM PF00486; transcriptional regulator 2620874 7135054 AFE_2934 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator YP_002427302.1 2620110 D 243159 CDS YP_002427303.1 218666770 7134410 2620987..2623392 1 NC_011761.1 identified by match to protein family HMM PF00593; TonB-dependent receptor 2623392 7134410 AFE_2935 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002427303.1 2620987 D 243159 CDS YP_002427304.1 218667848 7137266 2623588..2625240 1 NC_011761.1 hypothetical protein 2625240 7137266 AFE_2936 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427304.1 2623588 D 243159 CDS YP_002427305.1 218668031 7137281 complement(2626963..2627310) 1 NC_011761.1 identified by match to protein family HMM PF05717; ISAfe4, transposase orf2 2627310 7137281 AFE_2938 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf2 YP_002427305.1 2626963 R 243159 CDS YP_002427306.1 218665554 7134796 complement(2627301..2627633) 1 NC_011761.1 Assignment based on BLAST search at the ISFinder database, and proximity to other transposase ORFs.; ISAfe4, transposase orf1 2627633 7134796 AFE_2939 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf1 YP_002427306.1 2627301 R 243159 CDS YP_002427307.1 218666257 7135926 2627701..2628435 1 NC_011761.1 TonB-dependent receptor domain-containing protein 2628435 7135926 AFE_2940 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor domain-containing protein YP_002427307.1 2627701 D 243159 CDS YP_002427308.1 218667644 7136614 2628629..2629207 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2629207 7136614 AFE_2942 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427308.1 2628629 D 243159 CDS YP_002427309.1 218666013 7135818 complement(2629162..2629293) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2629293 7135818 AFE_2941 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427309.1 2629162 R 243159 CDS YP_002427310.1 218666732 7134229 2629355..2629639 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2629639 7134229 AFE_2943 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427310.1 2629355 D 243159 CDS YP_002427311.1 218665993 7137227 complement(2630001..2632577) 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; cation transporting P-type ATPase 2632577 7137227 AFE_2944 Acidithiobacillus ferrooxidans ATCC 23270 cation transporting P-type ATPase YP_002427311.1 2630001 R 243159 CDS YP_002427312.1 218666479 7134207 complement(2632726..2633151) 1 NC_011761.1 identified by similarity to SP:P39903; match to protein family HMM PF01641; match to protein family HMM TIGR00357; methionine-R-sulfoxide reductase 2633151 msrB 7134207 msrB Acidithiobacillus ferrooxidans ATCC 23270 methionine-R-sulfoxide reductase YP_002427312.1 2632726 R 243159 CDS YP_002427313.1 218665715 7136289 complement(2633157..2633753) 1 NC_011761.1 identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; peptide-methionine (S)-S-oxide reductase 2633753 msrA 7136289 msrA Acidithiobacillus ferrooxidans ATCC 23270 peptide-methionine (S)-S-oxide reductase YP_002427313.1 2633157 R 243159 CDS YP_002427314.1 218665533 7137198 2633905..2634813 1 NC_011761.1 identified by similarity to SP:P77202; thiol:disulfide interchange protein DsbG 2634813 7137198 AFE_2947 Acidithiobacillus ferrooxidans ATCC 23270 thiol:disulfide interchange protein DsbG YP_002427314.1 2633905 D 243159 CDS YP_002427315.1 218667756 7135904 2634873..2635529 1 NC_011761.1 identified by similarity to SP:P52085; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate (nicotinamide) nucleotide adenylyltransferase 2635529 nadD 7135904 nadD Acidithiobacillus ferrooxidans ATCC 23270 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_002427315.1 2634873 D 243159 CDS YP_002427316.1 218666039 7134430 2635553..2635909 1 NC_011761.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap family protein 2635909 7134430 AFE_2949 Acidithiobacillus ferrooxidans ATCC 23270 iojap family protein YP_002427316.1 2635553 D 243159 CDS YP_002427317.1 218667462 7136959 2635916..2636389 1 NC_011761.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2636389 7136959 AFE_2950 Acidithiobacillus ferrooxidans ATCC 23270 rRNA large subunit methyltransferase YP_002427317.1 2635916 D 243159 CDS YP_002427318.1 218665984 7136753 2636403..2636834 1 NC_011761.1 lipoprotein 2636834 7136753 AFE_2951 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427318.1 2636403 D 243159 CDS YP_002427319.1 218666976 7134198 2636834..2637712 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2637712 7134198 AFE_2952 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427319.1 2636834 D 243159 CDS YP_002427320.1 218665480 7134839 2637709..2638296 1 NC_011761.1 identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; maf protein 2638296 maf-1 7134839 maf-1 Acidithiobacillus ferrooxidans ATCC 23270 maf protein YP_002427320.1 2637709 D 243159 CDS YP_002427321.1 218667189 7135093 2638293..2639783 1 NC_011761.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family 2639783 7135093 AFE_2954 Acidithiobacillus ferrooxidans ATCC 23270 ribonuclease, Rne/Rng family YP_002427321.1 2638293 D 243159 CDS YP_002427322.1 218666097 7135582 complement(2639809..2641182) 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00158; sigma-54 dependent DNA-binding response regulator 2641182 7135582 AFE_2955 Acidithiobacillus ferrooxidans ATCC 23270 sigma-54 dependent DNA-binding response regulator YP_002427322.1 2639809 R 243159 CDS YP_002427323.1 218665928 7137018 complement(2641189..2641653) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2641653 7137018 AFE_2956 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427323.1 2641189 R 243159 CDS YP_002427324.1 218667887 7134138 complement(2641481..2643001) 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase 2643001 7134138 AFE_2957 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002427324.1 2641481 R 243159 CDS YP_002427325.1 218667022 7136546 2643000..2643635 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2643635 7136546 AFE_2958 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427325.1 2643000 D 243159 CDS YP_002427326.1 218667384 7134887 complement(2643724..2644005) 1 NC_011761.1 identified by similarity to GB:AAQ61020.1; match to protein family HMM PF04362; hypothetical protein 2644005 7134887 AFE_2959 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427326.1 2643724 R 243159 CDS YP_002427327.1 218666700 7136906 2644457..2645929 1 NC_011761.1 identified by match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2645929 7136906 AFE_2960 Acidithiobacillus ferrooxidans ATCC 23270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002427327.1 2644457 D 243159 CDS YP_002427328.1 218667287 7134571 2645950..2647065 1 NC_011761.1 identified by similarity to SP:P32014; capsule polysaccharide export inner-membrane protein 2647065 7134571 AFE_2961 Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide export inner-membrane protein YP_002427328.1 2645950 D 243159 CDS YP_002427329.1 218665543 7135131 2647404..2648249 1 NC_011761.1 identified by similarity to SP:P32015; match to protein family HMM PF01061; capsule polysaccharide exporter, inner-membrane protein CtrC 2648249 ctrC 7135131 ctrC Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide exporter, inner-membrane protein CtrC YP_002427329.1 2647404 D 243159 CDS YP_002427330.1 218666896 7135915 2648246..2648899 1 NC_011761.1 identified by similarity to SP:P32016; match to protein family HMM PF00005; capsule polysaccharide exporter, ATP-binding protein 2648899 ctrD 7135915 ctrD Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide exporter, ATP-binding protein YP_002427330.1 2648246 D 243159 CDS YP_002427331.1 218667653 7134606 2648991..2649740 1 NC_011761.1 identified by match to protein family HMM TIGR01444; methyltransferase 2649740 7134606 AFE_2964 Acidithiobacillus ferrooxidans ATCC 23270 methyltransferase YP_002427331.1 2648991 D 243159 CDS YP_002427332.1 218665233 7135827 2649792..2650433 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2650433 7135827 AFE_2965 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427332.1 2649792 D 243159 CDS YP_002427333.1 218665867 7135721 2650382..2650552 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2650552 7135721 AFE_2966 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427333.1 2650382 D 243159 CDS YP_002427334.1 218665432 7135422 2650455..2656202 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 2656202 7135422 AFE_2967 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002427334.1 2650455 D 243159 CDS YP_002427335.1 218667060 7135044 2656290..2657861 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2657861 7135044 AFE_2968 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427335.1 2656290 D 243159 CDS YP_002427336.1 218666044 7136660 2657861..2658676 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2658676 7136660 AFE_2969 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427336.1 2657861 D 243159 CDS YP_002427337.1 218666327 7136964 2658831..2659712 1 NC_011761.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2659712 cysD-1 7136964 cysD-1 Acidithiobacillus ferrooxidans ATCC 23270 sulfate adenylyltransferase subunit 2 YP_002427337.1 2658831 D 243159 CDS YP_002427338.1 218666793 7136466 2659712..2661526 1 NC_011761.1 identified by match to protein family HMM PF00009; match to protein family HMM PF01583; match to protein family HMM PF03144; match to protein family HMM TIGR00455; match to protein family HMM TIGR02034; sulfate adenylyltransferase 2661526 cysNC 7136466 cysNC Acidithiobacillus ferrooxidans ATCC 23270 sulfate adenylyltransferase YP_002427338.1 2659712 D 243159 CDS YP_002427339.1 218667703 7137042 complement(2661596..2662822) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 2662822 7137042 AFE_2972 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002427339.1 2661596 R 243159 CDS YP_002427340.1 218668143 7135486 2663162..2663998 1 NC_011761.1 identified by similarity to SP:P22255; match to protein family HMM PF00459; match to protein family HMM TIGR01331; 3'(2'),5'-bisphosphate nucleotidase 2663998 cysQ 7135486 cysQ Acidithiobacillus ferrooxidans ATCC 23270 3'(2'),5'-bisphosphate nucleotidase YP_002427340.1 2663162 D 243159 CDS YP_002427341.1 218667257 7135962 2663976..2665733 1 NC_011761.1 identified by similarity to GB:AAO77300.1; hypothetical protein 2665733 7135962 AFE_2974 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427341.1 2663976 D 243159 CDS YP_002427342.1 218665440 7135651 2665813..2666985 1 NC_011761.1 identified by similarity to SP:P22236; match to protein family HMM PF02563; capsule polysaccharide export protein, BexD/CtrA/VexA family 2666985 7135651 AFE_2975 Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide export protein, BexD/CtrA/VexA family YP_002427342.1 2665813 D 243159 CDS YP_002427343.1 218666230 7135052 2666999..2668168 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 2668168 7135052 AFE_2976 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002427343.1 2666999 D 243159 CDS YP_002427344.1 218665959 7136587 2668314..2669333 1 NC_011761.1 identified by similarity to SP:Q51366; match to protein family HMM PF01370; match to protein family HMM TIGR01472; GDP-mannose 4,6-dehydratase 2669333 gmd-1 7136587 gmd-1 Acidithiobacillus ferrooxidans ATCC 23270 GDP-mannose 4,6-dehydratase YP_002427344.1 2668314 D 243159 CDS YP_002427345.1 218666797 7134170 2669424..2670116 1 NC_011761.1 identified by match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 2670116 7134170 AFE_2978 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427345.1 2669424 D 243159 CDS YP_002427346.1 218666092 7137046 2670125..2670943 1 NC_011761.1 identified by similarity to GB:AAF04382.1; match to protein family HMM PF08241; match to protein family HMM PF08242; WbbD domain-containing protein 2670943 7137046 AFE_2979 Acidithiobacillus ferrooxidans ATCC 23270 WbbD domain-containing protein YP_002427346.1 2670125 D 243159 CDS YP_002427347.1 218665802 7137013 2670987..2671283 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2671283 7137013 AFE_2980 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427347.1 2670987 D 243159 CDS YP_002427348.1 218665144 7136117 2671270..2671395 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2671395 7136117 AFE_2981 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427348.1 2671270 D 243159 CDS YP_002427349.1 218667184 7134296 2671392..2671529 1 NC_011761.1 identified by similarity to GB:AAP84138.1; hypothetical protein 2671529 7134296 AFE_2982 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427349.1 2671392 D 243159 CDS YP_002427350.1 218666488 7134734 2671682..2671924 1 NC_011761.1 identified by similarity to SP:Q06253; match to protein family HMM TIGR01552; prevent-host-death family protein 2671924 7134734 AFE_2983 Acidithiobacillus ferrooxidans ATCC 23270 prevent-host-death family protein YP_002427350.1 2671682 D 243159 CDS YP_002427351.1 218665493 7136298 2671924..2672376 1 NC_011761.1 identified by match to protein family HMM PF01850; PIN domain-containing protein 2672376 7136298 AFE_2984 Acidithiobacillus ferrooxidans ATCC 23270 PIN domain-containing protein YP_002427351.1 2671924 D 243159 CDS YP_002427352.1 218666647 7135106 complement(2672501..2674357) 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter permease/ATP-binding protein 2674357 7135106 AFE_2985 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter permease/ATP-binding protein YP_002427352.1 2672501 R 243159 CDS YP_002427353.1 218666171 7134518 complement(2674419..2674856) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2674856 7134518 AFE_2986 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002427353.1 2674419 R 243159 CDS YP_002427354.1 218666728 7134071 complement(2674880..2676511) 1 NC_011761.1 identified by similarity to SP:P42061; match to protein family HMM PF00496; peptide ABC transporter substrate-binding protein 2676511 7134071 AFE_2987 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter substrate-binding protein YP_002427354.1 2674880 R 243159 CDS YP_002427355.1 218667046 7137223 complement(2676618..2677628) 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; peptide ABC transporter ATP-binding protein 2677628 7137223 AFE_2988 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter ATP-binding protein YP_002427355.1 2676618 R 243159 CDS YP_002427356.1 218667938 7136646 complement(2677625..2678626) 1 NC_011761.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; peptide ABC transporter ATP-binding protein 2678626 7136646 AFE_2989 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter ATP-binding protein YP_002427356.1 2677625 R 243159 CDS YP_002427357.1 218665618 7135245 complement(2678694..2679584) 1 NC_011761.1 identified by match to protein family HMM PF00528; peptide ABC transporter permease 2679584 7135245 AFE_2990 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter permease YP_002427357.1 2678694 R 243159 CDS YP_002427358.1 218667032 7135561 complement(2679598..2680557) 1 NC_011761.1 identified by similarity to SP:P50989; match to protein family HMM PF00528; peptide ABC transporter permease 2680557 7135561 AFE_2991 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter permease YP_002427358.1 2679598 R 243159 CDS YP_002427359.1 218667937 7134897 complement(2680603..2682099) 1 NC_011761.1 identified by similarity to SP:P42061; match to protein family HMM PF00496; peptide ABC transporter substrate-binding protein 2682099 7134897 AFE_2992 Acidithiobacillus ferrooxidans ATCC 23270 peptide ABC transporter substrate-binding protein YP_002427359.1 2680603 R 243159 CDS YP_002427360.1 218665110 7135244 complement(2682243..2684084) 1 NC_011761.1 identified by similarity to GB:AAM36869.1; hypothetical protein 2684084 7135244 AFE_2993 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427360.1 2682243 R 243159 CDS YP_002427361.1 218668149 7134261 complement(2684077..2686020) 1 NC_011761.1 identified by similarity to GB:AAM36869.1; hypothetical protein 2686020 7134261 AFE_2994 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427361.1 2684077 R 243159 CDS YP_002427362.1 218665446 7135968 complement(2686026..2686244) 1 NC_011761.1 identified by similarity to GB:CAD11970.1; hypothetical protein 2686244 7135968 AFE_2995 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427362.1 2686026 R 243159 CDS YP_002427363.1 218666106 7135058 complement(2686541..2686681) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2686681 7135058 AFE_2996 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427363.1 2686541 R 243159 CDS YP_002427364.1 218666368 7137027 complement(2686867..2687013) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2687013 7137027 AFE_2997 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427364.1 2686867 R 243159 CDS YP_002427365.1 218667494 7136508 2687000..2689399 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 2689399 7136508 AFE_2998 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002427365.1 2687000 D 243159 CDS YP_002427366.1 218665475 7136788 2689481..2690113 1 NC_011761.1 identified by match to protein family HMM PF01914; match to protein family HMM TIGR00427; MarC family integral membrane protein 2690113 7136788 AFE_2999 Acidithiobacillus ferrooxidans ATCC 23270 MarC family integral membrane protein YP_002427366.1 2689481 D 243159 CDS YP_002427367.1 218666810 7135088 2690132..2691199 1 NC_011761.1 identified by similarity to SP:Q60176; match to protein family HMM PF00056; lactate/malate dehydrogenase family protein 2691199 7135088 AFE_3000 Acidithiobacillus ferrooxidans ATCC 23270 lactate/malate dehydrogenase family protein YP_002427367.1 2690132 D 243159 CDS YP_002427368.1 218667694 7137059 2691187..2691459 1 NC_011761.1 identified by match to protein family HMM PF01842; ACT domain-containing protein 2691459 7137059 AFE_3001 Acidithiobacillus ferrooxidans ATCC 23270 ACT domain-containing protein YP_002427368.1 2691187 D 243159 CDS YP_002427369.1 218665210 7135477 2691531..2692226 1 NC_011761.1 TonB family protein 2692226 7135477 AFE_3002 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002427369.1 2691531 D 243159 CDS YP_002427370.1 218665964 7135698 2692264..2692911 1 NC_011761.1 identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2692911 7135698 AFE_3003 Acidithiobacillus ferrooxidans ATCC 23270 MotA/TolQ/ExbB proton channel family protein YP_002427370.1 2692264 D 243159 CDS YP_002427371.1 218666127 7134175 2692943..2693341 1 NC_011761.1 identified by match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein 2693341 7134175 AFE_3004 Acidithiobacillus ferrooxidans ATCC 23270 ExbD/TolR family biopolymer transport protein YP_002427371.1 2692943 D 243159 CDS YP_002427372.1 218667424 7134027 2693374..2693856 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2693856 7134027 AFE_3005 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002427372.1 2693374 D 243159 CDS YP_002427373.1 218667483 7136948 2693961..2694062 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2694062 7136948 AFE_3006 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427373.1 2693961 D 243159 CDS YP_002427374.1 218665679 7136775 complement(2694130..2694348) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2694348 7136775 AFE_3007 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427374.1 2694130 R 243159 CDS YP_002427375.1 218666494 7137162 2694332..2695906 1 NC_011761.1 identified by match to protein family HMM PF00534; group 1 glycosyl transferase 2695906 7137162 AFE_3008 Acidithiobacillus ferrooxidans ATCC 23270 group 1 glycosyl transferase YP_002427375.1 2694332 D 243159 CDS YP_002427376.1 218666992 7136304 2695985..2696131 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2696131 7136304 AFE_3009 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427376.1 2695985 D 243159 CDS YP_002427377.1 218667914 7134855 2696128..2703588 1 NC_011761.1 identified by similarity to GB:AAK26474.1; match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF02801; match to protein family HMM PF08240; match to protein family HMM PF08659; polyketide synthase, type I 2703588 7134855 AFE_3010 Acidithiobacillus ferrooxidans ATCC 23270 polyketide synthase, type I YP_002427377.1 2696128 D 243159 CDS YP_002427378.1 218665944 7135221 2703590..2704915 1 NC_011761.1 identified by match to protein family HMM PF00155; match to protein family HMM PF00202; 8-amino-7-oxononanoate synthase 2704915 7135221 AFE_3011 Acidithiobacillus ferrooxidans ATCC 23270 8-amino-7-oxononanoate synthase YP_002427378.1 2703590 D 243159 CDS YP_002427379.1 218666718 7134154 2704984..2706027 1 NC_011761.1 identified by match to protein family HMM PF05159; capsule polysaccharide biosynthesis protein 2706027 7134154 AFE_3012 Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide biosynthesis protein YP_002427379.1 2704984 D 243159 CDS YP_002427380.1 218665660 7137213 2706024..2707334 1 NC_011761.1 identified by similarity to SP:Q05014; match to protein family HMM PF05159; capsule polysaccharide modification protein 2707334 7137213 AFE_3013 Acidithiobacillus ferrooxidans ATCC 23270 capsule polysaccharide modification protein YP_002427380.1 2706024 D 243159 CDS YP_002427381.1 218666499 7137143 2707241..2708014 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01370; short-chain dehydrogenase 2708014 7137143 AFE_3014 Acidithiobacillus ferrooxidans ATCC 23270 short-chain dehydrogenase YP_002427381.1 2707241 D 243159 CDS YP_002427382.1 218667457 7136311 2708007..2709599 1 NC_011761.1 identified by similarity to GB:CAA45491.1; match to protein family HMM PF00884; capsular polysaccharide biosynthesis protein 2709599 7136311 AFE_3016 Acidithiobacillus ferrooxidans ATCC 23270 capsular polysaccharide biosynthesis protein YP_002427382.1 2708007 D 243159 CDS YP_002427383.1 218665261 7136748 complement(2709573..2710682) 1 NC_011761.1 identified by match to protein family HMM PF00293; match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 2710682 mutY 7136748 mutY Acidithiobacillus ferrooxidans ATCC 23270 A/G-specific adenine glycosylase YP_002427383.1 2709573 R 243159 CDS YP_002427384.1 218666140 7136202 complement(2710679..2712019) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2712019 7136202 AFE_3017 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427384.1 2710679 R 243159 CDS YP_002427385.1 218667888 7134040 complement(2711949..2713661) 1 NC_011761.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 2713661 ptsI 7134040 ptsI Acidithiobacillus ferrooxidans ATCC 23270 phosphoenolpyruvate-protein phosphotransferase YP_002427385.1 2711949 R 243159 CDS YP_002427386.1 218665778 7136547 complement(2713658..2713930) 1 NC_011761.1 identified by similarity to SP:P23537; match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier protein HPr 2713930 ptsH 7136547 ptsH Acidithiobacillus ferrooxidans ATCC 23270 phosphocarrier protein HPr YP_002427386.1 2713658 R 243159 CDS YP_002427387.1 218666589 7136093 complement(2714038..2714454) 1 NC_011761.1 identified by match to protein family HMM PF03610; PTS system transporter subunit IIA 2714454 7136093 AFE_3020 Acidithiobacillus ferrooxidans ATCC 23270 PTS system transporter subunit IIA YP_002427387.1 2714038 R 243159 CDS YP_002427388.1 218665320 7135319 complement(2714451..2715350) 1 NC_011761.1 identified by match to protein family HMM PF03668; ATPase 2715350 7135319 AFE_3021 Acidithiobacillus ferrooxidans ATCC 23270 ATPase YP_002427388.1 2714451 R 243159 CDS YP_002427389.1 218666481 7136261 complement(2715350..2716282) 1 NC_011761.1 identified by match to protein family HMM PF07475; Hpr(Ser) kinase/phosphatase 2716282 hprK 7136261 hprK Acidithiobacillus ferrooxidans ATCC 23270 Hpr(Ser) kinase/phosphatase YP_002427389.1 2715350 R 243159 CDS YP_002427390.1 218665101 7136291 complement(2716337..2716783) 1 NC_011761.1 identified by match to protein family HMM PF00359; PTS system sugar transporter subunit IIA 2716783 7136291 AFE_3023 Acidithiobacillus ferrooxidans ATCC 23270 PTS system sugar transporter subunit IIA YP_002427390.1 2716337 R 243159 CDS YP_002427391.1 218667495 7134252 complement(2716790..2717131) 1 NC_011761.1 identified by similarity to SP:P24694; match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 2717131 yfiA 7134252 yfiA Acidithiobacillus ferrooxidans ATCC 23270 ribosomal subunit interface protein YP_002427391.1 2716790 R 243159 CDS YP_002427392.1 218667002 7136549 complement(2717235..2718662) 1 NC_011761.1 identified by similarity to SP:P24695; match to protein family HMM PF00309; match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor 2718662 rpoN 7136549 rpoN Acidithiobacillus ferrooxidans ATCC 23270 RNA polymerase sigma-54 factor YP_002427392.1 2717235 R 243159 CDS YP_002427393.1 218665646 7134865 complement(2718675..2719400) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2719400 7134865 AFE_3026 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002427393.1 2718675 R 243159 CDS YP_002427394.1 218667648 7137129 complement(2719397..2719945) 1 NC_011761.1 identified by match to protein family HMM PF03968; match to protein family HMM TIGR03002; hypothetical protein 2719945 7137129 AFE_3027 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427394.1 2719397 R 243159 CDS YP_002427395.1 218666614 7135822 complement(2719917..2720486) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2720486 7135822 AFE_3028 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427395.1 2719917 R 243159 CDS YP_002427396.1 218667708 7135345 complement(2720512..2721066) 1 NC_011761.1 identified by similarity to SP:P45396; match to protein family HMM TIGR01662; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2721066 kdsC 7135345 kdsC Acidithiobacillus ferrooxidans ATCC 23270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_002427396.1 2720512 R 243159 CDS YP_002427397.1 218667398 7135491 complement(2721063..2722049) 1 NC_011761.1 identified by similarity to SP:P45395; match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; sugar isomerase, KpsF/GutQ family 2722049 7135491 AFE_3030 Acidithiobacillus ferrooxidans ATCC 23270 sugar isomerase, KpsF/GutQ family YP_002427397.1 2721063 R 243159 CDS YP_002427398.1 218666760 7136921 complement(2722369..2722803) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2722803 7136921 AFE_3031 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427398.1 2722369 R 243159 CDS YP_002427399.1 218666437 7137255 complement(2722793..2723482) 1 NC_011761.1 identified by match to protein family HMM PF00483; nucleotidyltransferase family protein 2723482 7137255 AFE_3032 Acidithiobacillus ferrooxidans ATCC 23270 nucleotidyltransferase family protein YP_002427399.1 2722793 R 243159 CDS YP_002427400.1 218665717 7134383 complement(2723455..2724483) 1 NC_011761.1 identified by match to protein family HMM PF01636; phosphotransferase 2724483 7134383 AFE_3033 Acidithiobacillus ferrooxidans ATCC 23270 phosphotransferase YP_002427400.1 2723455 R 243159 CDS YP_002427401.1 218666054 7137200 2724591..2726696 1 NC_011761.1 identified by similarity to SP:P31554; match to protein family HMM PF03968; match to protein family HMM PF04453; organic solvent tolerance protein 2726696 7137200 AFE_3034 Acidithiobacillus ferrooxidans ATCC 23270 organic solvent tolerance protein YP_002427401.1 2724591 D 243159 CDS YP_002427402.1 218665253 7136974 2726819..2728129 1 NC_011761.1 identified by similarity to SP:P21202; match to protein family HMM PF00639; match to protein family HMM PF09312; survival protein SurA 2728129 surA 7136974 surA Acidithiobacillus ferrooxidans ATCC 23270 survival protein SurA YP_002427402.1 2726819 D 243159 CDS YP_002427403.1 218667268 7135742 2728122..2728928 1 NC_011761.1 identified by match to protein family HMM PF01061; ABC transporter 2728928 7135742 AFE_3036 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter YP_002427403.1 2728122 D 243159 CDS YP_002427404.1 218665916 7135028 2728939..2729271 1 NC_011761.1 identified by match to protein family HMM PF01722; BolA family protein 2729271 7135028 AFE_3037 Acidithiobacillus ferrooxidans ATCC 23270 BolA family protein YP_002427404.1 2728939 D 243159 CDS YP_002427405.1 218665492 7134126 2729303..2729635 1 NC_011761.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR00365; glutaredoxin-like protein 2729635 7134126 AFE_3038 Acidithiobacillus ferrooxidans ATCC 23270 glutaredoxin-like protein YP_002427405.1 2729303 D 243159 CDS YP_002427406.1 218667272 7135105 2729645..2730916 1 NC_011761.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2730916 murA 7135105 murA Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002427406.1 2729645 D 243159 CDS YP_002427407.1 218665713 7135115 2730913..2731560 1 NC_011761.1 identified by similarity to SP:O34520; match to protein family HMM PF01634; match to protein family HMM TIGR00070; ATP phosphoribosyltransferase 2731560 hisG 7135115 hisG Acidithiobacillus ferrooxidans ATCC 23270 ATP phosphoribosyltransferase YP_002427407.1 2730913 D 243159 CDS YP_002427408.1 218665150 7137196 2731557..2732858 1 NC_011761.1 identified by similarity to SP:O34651; match to protein family HMM PF00815; match to protein family HMM TIGR00069; histidinol dehydrogenase 2732858 hisD 7137196 hisD Acidithiobacillus ferrooxidans ATCC 23270 histidinol dehydrogenase YP_002427408.1 2731557 D 243159 CDS YP_002427409.1 218667068 7134302 2732855..2733934 1 NC_011761.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate aminotransferase 2733934 hisC-1 7134302 hisC-1 Acidithiobacillus ferrooxidans ATCC 23270 histidinol-phosphate aminotransferase YP_002427409.1 2732855 D 243159 CDS YP_002427410.1 218665652 7136668 2733931..2734530 1 NC_011761.1 identified by match to protein family HMM PF00475; imidazoleglycerol-phosphate dehydratase 2734530 hisB 7136668 hisB Acidithiobacillus ferrooxidans ATCC 23270 imidazoleglycerol-phosphate dehydratase YP_002427410.1 2733931 D 243159 CDS YP_002427411.1 218667392 7137135 2734527..2735198 1 NC_011761.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2735198 hisH 7137135 hisH Acidithiobacillus ferrooxidans ATCC 23270 imidazole glycerol phosphate synthase subunit HisH YP_002427411.1 2734527 D 243159 CDS YP_002427412.1 218665502 7136915 2735238..2735966 1 NC_011761.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2735966 hisA 7136915 hisA Acidithiobacillus ferrooxidans ATCC 23270 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_002427412.1 2735238 D 243159 CDS YP_002427413.1 218667402 7135873 2735971..2736732 1 NC_011761.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2736732 hisF 7135873 hisF Acidithiobacillus ferrooxidans ATCC 23270 imidazole glycerol phosphate synthase subunit HisF YP_002427413.1 2735971 D 243159 CDS YP_002427414.1 218666336 7136925 2736819..2737511 1 NC_011761.1 identified by similarity to SP:O34912; match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; match to protein family HMM TIGR03456; phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase 2737511 hisIE 7136925 hisIE Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosyl-AMP pyrophosphatase/phosphoribosyl-ATP cyclohydrolase YP_002427414.1 2736819 D 243159 CDS YP_002427415.1 218667974 7136475 2737591..2737809 1 NC_011761.1 identified by similarity to GB:CAC29147.1; match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin-arginine translocation protein, TatA/E family 2737809 tatA 7136475 tatA Acidithiobacillus ferrooxidans ATCC 23270 twin-arginine translocation protein, TatA/E family YP_002427415.1 2737591 D 243159 CDS YP_002427416.1 218665862 7134738 2737816..2738184 1 NC_011761.1 identified by similarity to GB:CAC29148.1; match to protein family HMM PF02416; match to protein family HMM TIGR01410; twin-arginine translocation protein TatB 2738184 tatB 7134738 tatB Acidithiobacillus ferrooxidans ATCC 23270 twin-arginine translocation protein TatB YP_002427416.1 2737816 D 243159 CDS YP_002427417.1 218667741 7135417 2738323..2739129 1 NC_011761.1 identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 2739129 tatC 7135417 tatC Acidithiobacillus ferrooxidans ATCC 23270 Sec-independent protein translocase TatC YP_002427417.1 2738323 D 243159 CDS YP_002427418.1 218667567 7134415 2739425..2740846 1 NC_011761.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 2740846 rbcL 7134415 rbcL Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisophosphate carboxylase YP_002427418.1 2739425 D 243159 CDS YP_002427419.1 218666975 7136433 2740877..2741233 1 NC_011761.1 identified by match to protein family HMM PF00101; ribulose bisphosphate carboxylase, small subunit 2741233 cbbS-1 7136433 cbbS-1 Acidithiobacillus ferrooxidans ATCC 23270 ribulose bisphosphate carboxylase, small subunit YP_002427419.1 2740877 D 243159 CDS YP_002427420.1 218668154 7134838 2741389..2742192 1 NC_011761.1 identified by similarity to GB:BAA76361.1; match to protein family HMM PF07728; match to protein family HMM PF08406; CbbQ protein 2742192 cbbQ-1 7134838 cbbQ-1 Acidithiobacillus ferrooxidans ATCC 23270 CbbQ protein YP_002427420.1 2741389 D 243159 CDS YP_002427421.1 218666129 7135973 2742244..2744562 1 NC_011761.1 identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein 2744562 7135973 AFE_3054 Acidithiobacillus ferrooxidans ATCC 23270 von Willebrand factor type A domain-containing protein YP_002427421.1 2742244 D 243159 CDS YP_002427422.1 218665244 7134029 complement(2744652..2744819) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2744819 7134029 AFE_3055 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427422.1 2744652 R 243159 CDS YP_002427423.1 218665370 7135733 2744758..2744961 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2744961 7135733 AFE_3056 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427423.1 2744758 D 243159 CDS YP_002427424.1 218667425 7136152 2744939..2747464 1 NC_011761.1 identified by match to protein family HMM PF00563; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254; sensory box-containing diguanylate cyclase 2747464 7136152 AFE_3057 Acidithiobacillus ferrooxidans ATCC 23270 sensory box-containing diguanylate cyclase YP_002427424.1 2744939 D 243159 CDS YP_002427425.1 218666277 7136949 complement(2747587..2748861) 1 NC_011761.1 identified by similarity to SP:Q59712; match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase 2748861 pyrC-1 7136949 pyrC-1 Acidithiobacillus ferrooxidans ATCC 23270 dihydroorotase YP_002427425.1 2747587 R 243159 CDS YP_002427426.1 218667251 7137285 complement(2748867..2749850) 1 NC_011761.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2749850 pyrB 7137285 pyrB Acidithiobacillus ferrooxidans ATCC 23270 aspartate carbamoyltransferase catalytic subunit YP_002427426.1 2748867 R 243159 CDS YP_002427427.1 218667752 7135645 complement(2749847..2750353) 1 NC_011761.1 identified by similarity to SP:P39765; match to protein family HMM PF00156; bifunctional pyrimidine operon regulatory protein/uracil phosphoribosyltransferase 2750353 pyrR 7135645 pyrR Acidithiobacillus ferrooxidans ATCC 23270 bifunctional pyrimidine operon regulatory protein/uracil phosphoribosyltransferase YP_002427427.1 2749847 R 243159 CDS YP_002427428.1 218665123 7134426 complement(2750350..2750781) 1 NC_011761.1 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein 2750781 7134426 AFE_3061 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427428.1 2750350 R 243159 CDS YP_002427429.1 218665957 7134274 complement(2750774..2751331) 1 NC_011761.1 identified by similarity to GB:BAC60875.1; match to protein family HMM PF02622; hypothetical protein 2751331 7134274 AFE_3062 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427429.1 2750774 R 243159 CDS YP_002427430.1 218665382 7134168 complement(2751401..2752339) 1 NC_011761.1 identified by similarity to SP:P04425; match to protein family HMM PF02951; match to protein family HMM PF02955; match to protein family HMM PF08443; match to protein family HMM TIGR01380; glutathione synthetase 2752339 gshB 7134168 gshB Acidithiobacillus ferrooxidans ATCC 23270 glutathione synthetase YP_002427430.1 2751401 R 243159 CDS YP_002427431.1 218666042 7136164 complement(2752336..2753646) 1 NC_011761.1 identified by match to protein family HMM PF08886; match to protein family HMM TIGR02049; glutamate--cysteine ligase 2753646 gshA 7136164 gshA Acidithiobacillus ferrooxidans ATCC 23270 glutamate--cysteine ligase YP_002427431.1 2752336 R 243159 CDS YP_002427432.1 218667730 7136962 complement(2753656..2754816) 1 NC_011761.1 catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; citrate synthase 2754816 citZ 7136962 citZ Acidithiobacillus ferrooxidans ATCC 23270 citrate synthase YP_002427432.1 2753656 R 243159 CDS YP_002427433.1 218665140 7135513 complement(2754828..2755001) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2755001 7135513 AFE_3066 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427433.1 2754828 R 243159 CDS YP_002427434.1 218666508 7134291 complement(2755009..2755383) 1 NC_011761.1 identified by match to protein family HMM PF01521; match to protein family HMM TIGR00049; iron-sulfur cluster assembly accessory protein 2755383 7134291 AFE_3067 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster assembly accessory protein YP_002427434.1 2755009 R 243159 CDS YP_002427435.1 218666216 7136320 complement(2755513..2758464) 1 NC_011761.1 dihydrolipoamide acetyltransferase/dihydrolipoamide dehydrogenase; identified by similarity to PIR:C59237; match to protein family HMM PF00070; match to protein family HMM PF00198; match to protein family HMM PF00364; match to protein family HMM PF02817; match to protein family HMM PF02852; match to protein family HMM PF07992; pyruvate dehydrogenase complex, E2 and E3 components 2758464 pdhC 7136320 pdhC Acidithiobacillus ferrooxidans ATCC 23270 pyruvate dehydrogenase complex, E2 and E3 components YP_002427435.1 2755513 R 243159 CDS YP_002427436.1 218667594 7136572 complement(2758520..2759500) 1 NC_011761.1 identified by similarity to PIR:B59237; match to protein family HMM PF02779; match to protein family HMM PF02780; pyruvate dehydrogenase E1 component subunit beta 2759500 pdhB 7136572 pdhB Acidithiobacillus ferrooxidans ATCC 23270 pyruvate dehydrogenase E1 component subunit beta YP_002427436.1 2758520 R 243159 CDS YP_002427437.1 218665447 7135766 complement(2759493..2760476) 1 NC_011761.1 identified by similarity to PIR:A59237; match to protein family HMM PF00676; match to protein family HMM TIGR03182; pyruvate dehydrogenase E1 component subunit alpha 2760476 pdhA 7135766 pdhA Acidithiobacillus ferrooxidans ATCC 23270 pyruvate dehydrogenase E1 component subunit alpha YP_002427437.1 2759493 R 243159 CDS YP_002427438.1 218668134 7135059 complement(2760865..2761143) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2761143 7135059 AFE_3071 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427438.1 2760865 R 243159 CDS YP_002427439.1 218666739 7136444 complement(2761213..2761557) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2761557 7136444 AFE_3072 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427439.1 2761213 R 243159 CDS YP_002427440.1 218665046 7137234 complement(2761822..2762856) 1 NC_011761.1 identified by similarity to SP:P23715; match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850; N-acetyl-gamma-glutamyl-phosphate reductase 2762856 argC 7137234 argC Acidithiobacillus ferrooxidans ATCC 23270 N-acetyl-gamma-glutamyl-phosphate reductase YP_002427440.1 2761822 R 243159 CDS YP_002427441.1 218666820 7134975 complement(2762940..2763326) 1 NC_011761.1 identified by similarity to SP:P02363; match to protein family HMM PF00380; 30S ribosomal protein S9 2763326 rpsI 7134975 rpsI Acidithiobacillus ferrooxidans ATCC 23270 30S ribosomal protein S9 YP_002427441.1 2762940 R 243159 CDS YP_002427442.1 218665700 7137069 complement(2763339..2763767) 1 NC_011761.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2763767 rplM 7137069 rplM Acidithiobacillus ferrooxidans ATCC 23270 50S ribosomal protein L13 YP_002427442.1 2763339 R 243159 CDS YP_002427443.1 218668166 7137183 2763828..2764322 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2764322 7137183 AFE_3076 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427443.1 2763828 D 243159 CDS YP_002427444.1 218666417 7135985 complement(2764617..2764901) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2764901 7135985 AFE_3077 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427444.1 2764617 R 243159 CDS YP_002427445.1 218667454 7134363 complement(2765188..2765400) 1 NC_011761.1 identified by similarity to GB:CAD15208.1; hypothetical protein 2765400 7134363 AFE_3078 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427445.1 2765188 R 243159 CDS YP_002427446.1 218665409 7136745 complement(2765486..2766085) 1 NC_011761.1 identified by match to protein family HMM PF00881; nitroreductase family protein 2766085 7136745 AFE_3079 Acidithiobacillus ferrooxidans ATCC 23270 nitroreductase family protein YP_002427446.1 2765486 R 243159 CDS YP_002427447.1 218665375 7134947 complement(2771581..2772804) 1 NC_011761.1 identified by similarity to SP:P41256; match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosyl-tRNA synthetase 2772804 tyrS 7134947 tyrS Acidithiobacillus ferrooxidans ATCC 23270 tyrosyl-tRNA synthetase YP_002427447.1 2771581 R 243159 CDS YP_002427448.1 218667546 7136157 complement(2772904..2775195) 1 NC_011761.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; plasma-membrane proton-efflux P-type ATPase 2775195 7136157 AFE_3086 Acidithiobacillus ferrooxidans ATCC 23270 plasma-membrane proton-efflux P-type ATPase YP_002427448.1 2772904 R 243159 CDS YP_002427449.1 218667551 7136412 complement(2775176..2775313) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2775313 7136412 AFE_3087 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427449.1 2775176 R 243159 CDS YP_002427450.1 218665979 7136417 2775299..2775439 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2775439 7136417 AFE_3088 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427450.1 2775299 D 243159 CDS YP_002427451.1 218667904 7134193 2775436..2775819 1 NC_011761.1 identified by similarity to SP:P31664; match to protein family HMM PF01476; match to protein family HMM PF02261; match to protein family HMM TIGR00223; aspartate 1-decarboxylase 2775819 panD 7134193 panD Acidithiobacillus ferrooxidans ATCC 23270 aspartate 1-decarboxylase YP_002427451.1 2775436 D 243159 CDS YP_002427452.1 218667900 7135211 2775868..2777061 1 NC_011761.1 identified by match to protein family HMM PF07690; hypothetical protein 2777061 7135211 AFE_3090 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427452.1 2775868 D 243159 CDS YP_002427453.1 218665276 7135207 2777065..2777160 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2777160 7135207 AFE_3091 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427453.1 2777065 D 243159 CDS YP_002427454.1 218665631 7136217 2777220..2777906 1 NC_011761.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 2777906 engB 7136217 engB Acidithiobacillus ferrooxidans ATCC 23270 ribosome biogenesis GTP-binding protein YsxC YP_002427454.1 2777220 D 243159 CDS YP_002427455.1 218666548 7135574 2777972..2779234 1 NC_011761.1 identified by similarity to SP:P31069; match to protein family HMM PF00520; match to protein family HMM PF02254; match to protein family HMM PF07885; voltage-gated potassium channel 2779234 7135574 AFE_3093 Acidithiobacillus ferrooxidans ATCC 23270 voltage-gated potassium channel YP_002427455.1 2777972 D 243159 CDS YP_002427456.1 218665686 7135278 complement(2779237..2781936) 1 NC_011761.1 identified by similarity to SP:P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA polymerase I 2781936 polI 7135278 polI Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase I YP_002427456.1 2779237 R 243159 CDS YP_002427457.1 218667537 7137169 2781988..2782725 1 NC_011761.1 identified by similarity to GB:CAD85380.1; match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 2782725 7137169 AFE_3095 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427457.1 2781988 D 243159 CDS YP_002427458.1 218666584 7136403 2782746..2783081 1 NC_011761.1 identified by similarity to GB:AAQ58453.1; hypothetical protein 2783081 7136403 AFE_3096 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427458.1 2782746 D 243159 CDS YP_002427459.1 218667990 7135314 2783124..2784056 1 NC_011761.1 identified by match to protein family HMM PF01636; match to protein family HMM TIGR00938; homoserine kinase 2784056 thrB 7135314 thrB Acidithiobacillus ferrooxidans ATCC 23270 homoserine kinase YP_002427459.1 2783124 D 243159 CDS YP_002427460.1 218666231 7134754 complement(2784095..2784418) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2784418 7134754 AFE_3098 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427460.1 2784095 R 243159 CDS YP_002427461.1 218667133 7136588 2784621..2785223 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2785223 7136588 AFE_3099 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427461.1 2784621 D 243159 CDS YP_002427462.1 218665419 7134680 complement(2785234..2785641) 1 NC_011761.1 identified by similarity to GB:CAB44964.1; match to protein family HMM PF00633; match to protein family HMM TIGR00426; competence protein ComEA 2785641 7134680 AFE_3100 Acidithiobacillus ferrooxidans ATCC 23270 competence protein ComEA YP_002427462.1 2785234 R 243159 CDS YP_002427463.1 218666705 7135030 complement(2785660..2787789) 1 NC_011761.1 identified by match to protein family HMM PF00580; DNA helicase II 2787789 uvrD 7135030 uvrD Acidithiobacillus ferrooxidans ATCC 23270 DNA helicase II YP_002427463.1 2785660 R 243159 CDS YP_002427464.1 218667327 7134576 2787906..2788838 1 NC_011761.1 identified by similarity to SP:P36659; match to protein family HMM PF00226; match to protein family HMM PF01556; curved DNA-binding protein 2788838 cbpA 7134576 cbpA Acidithiobacillus ferrooxidans ATCC 23270 curved DNA-binding protein YP_002427464.1 2787906 D 243159 CDS YP_002427465.1 218665526 7135171 2789156..2789824 1 NC_011761.1 identified by similarity to GB:AAM31476.1; match to protein family HMM PF00156; phosphoribosyl transferase domain-containing protein 2789824 7135171 AFE_3103 Acidithiobacillus ferrooxidans ATCC 23270 phosphoribosyl transferase domain-containing protein YP_002427465.1 2789156 D 243159 CDS YP_002427466.1 218666221 7135897 2789828..2791558 1 NC_011761.1 identified by match to protein family HMM PF00633; match to protein family HMM PF02811; DNA polymerase X family protein 2791558 7135897 AFE_3104 Acidithiobacillus ferrooxidans ATCC 23270 DNA polymerase X family protein YP_002427466.1 2789828 D 243159 CDS YP_002427467.1 218667243 7136577 complement(2791647..2791952) 1 NC_011761.1 identified by similarity to GB:AAK61303.1; ISAfe6, transposase, degenerate 2791952 7136577 AFE_3105 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe6, transposase, degenerate YP_002427467.1 2791647 R 243159 CDS YP_002427468.1 218667661 7135637 complement(2792135..2792245) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2792245 7135637 AFE_3106 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427468.1 2792135 R 243159 CDS YP_002427469.1 218665058 7135444 2792679..2793383 1 NC_011761.1 identified by match to protein family HMM PF00034; cytochrome c4 2793383 cycA-1 7135444 cycA-1 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c4 YP_002427469.1 2792679 D 243159 CDS YP_002427470.1 218665265 7134987 2793376..2794167 1 NC_011761.1 identified by match to protein family HMM PF00106; match to protein family HMM PF08659; short-chain dehydrogenase 2794167 sdr_1 7134987 sdr_1 Acidithiobacillus ferrooxidans ATCC 23270 short-chain dehydrogenase YP_002427470.1 2793376 D 243159 CDS YP_002427471.1 218667795 7136206 2794266..2794886 1 NC_011761.1 identified by match to protein family HMM PF00355; match to protein family HMM TIGR01409; match to protein family HMM TIGR01416; ubiquinol--cytochrome c reductase, iron-sulfur subunit 2794886 petA-1 7136206 petA-1 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, iron-sulfur subunit YP_002427471.1 2794266 D 243159 CDS YP_002427472.1 218666252 7134470 2794914..2796122 1 NC_011761.1 identified by similarity to SP:P23134; match to protein family HMM PF00032; match to protein family HMM PF00033; ubiquinol--cytochrome c reductase, cytochrome b subunit 2796122 petB-1 7134470 petB-1 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, cytochrome b subunit YP_002427472.1 2794914 D 243159 CDS YP_002427473.1 218665234 7136609 2796119..2796847 1 NC_011761.1 identified by match to protein family HMM PF02167; ubiquinol--cytochrome c reductase, cytochrome c1 subunit 2796847 petC-1 7136609 petC-1 Acidithiobacillus ferrooxidans ATCC 23270 ubiquinol--cytochrome c reductase, cytochrome c1 subunit YP_002427473.1 2796119 D 243159 CDS YP_002427474.1 218665703 7135722 2797400..2799244 1 NC_011761.1 identified by match to protein family HMM PF05140; cytochrome c-type biogenesis protein ResB 2799244 resB 7135722 resB Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c-type biogenesis protein ResB YP_002427474.1 2797400 D 243159 CDS YP_002427475.1 218666926 7137186 2799366..2800424 1 NC_011761.1 identified by match to protein family HMM PF01578; match to protein family HMM TIGR03144; cytochrome c-type biogenesis protein ResC 2800424 resC 7137186 resC Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c-type biogenesis protein ResC YP_002427475.1 2799366 D 243159 CDS YP_002427476.1 218666328 7134636 2800604..2800969 1 NC_011761.1 identified by similarity to PIR:C70335; hypothetical protein 2800969 7134636 AFE_3114 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427476.1 2800604 D 243159 CDS YP_002427477.1 218665519 7136467 complement(2802475..2802960) 1 NC_011761.1 identified by similarity to SP:O67860; hypothetical protein 2802960 7136467 AFE_3115 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427477.1 2802475 R 243159 CDS YP_002427478.1 218666560 7135890 2803535..2803921 1 NC_011761.1 identified by similarity to PIR:C69319; hypothetical protein 2803921 7135890 AFE_3116 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427478.1 2803535 D 243159 CDS YP_002427479.1 218665842 7135290 2803965..2804195 1 NC_011761.1 identified by similarity to SP:O29695; match to protein family HMM PF01206; hypothetical protein 2804195 7135290 AFE_3117 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427479.1 2803965 D 243159 CDS YP_002427480.1 218667698 7135397 2804238..2805377 1 NC_011761.1 identified by similarity to SP:Q9R112; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 2805377 7135397 AFE_3118 Acidithiobacillus ferrooxidans ATCC 23270 pyridine nucleotide-disulfide oxidoreductase YP_002427480.1 2804238 D 243159 CDS YP_002427481.1 218666387 7135481 complement(2806194..2806556) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2806556 7135481 AFE_3119 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427481.1 2806194 R 243159 CDS YP_002427482.1 218667870 7134331 2806719..2807033 1 NC_011761.1 hypothetical protein 2807033 7134331 AFE_3120 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427482.1 2806719 D 243159 CDS YP_002427483.1 218667018 7136529 2807385..2809151 1 NC_011761.1 identified by match to protein family HMM PF00175; match to protein family HMM PF00258; match to protein family HMM PF00667; sulfite reductase (NADPH) flavoprotein subunit alpha 2809151 cysJ 7136529 cysJ Acidithiobacillus ferrooxidans ATCC 23270 sulfite reductase (NADPH) flavoprotein subunit alpha YP_002427483.1 2807385 D 243159 CDS YP_002427484.1 218667543 7134882 2809141..2810832 1 NC_011761.1 identified by match to protein family HMM PF01077; match to protein family HMM PF03460; sulfite reductase (NADPH) hemoprotein subunit beta 2810832 cysI 7134882 cysI Acidithiobacillus ferrooxidans ATCC 23270 sulfite reductase (NADPH) hemoprotein subunit beta YP_002427484.1 2809141 D 243159 CDS YP_002427485.1 218668058 7136409 2810840..2811577 1 NC_011761.1 identified by match to protein family HMM PF01507; match to protein family HMM TIGR00434; match to protein family HMM TIGR02055; adenylylsulfate reductase 2811577 cysH 7136409 cysH Acidithiobacillus ferrooxidans ATCC 23270 adenylylsulfate reductase YP_002427485.1 2810840 D 243159 CDS YP_002427486.1 218667993 7136793 2811574..2812512 1 NC_011761.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 2812512 cysD-2 7136793 cysD-2 Acidithiobacillus ferrooxidans ATCC 23270 sulfate adenylyltransferase subunit 2 YP_002427486.1 2811574 D 243159 CDS YP_002427487.1 218665028 7134757 2812512..2813864 1 NC_011761.1 identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR02034; sulfate adenylyltransferase, large subunit 2813864 cysN 7134757 cysN Acidithiobacillus ferrooxidans ATCC 23270 sulfate adenylyltransferase, large subunit YP_002427487.1 2812512 D 243159 CDS YP_002427488.1 218666848 7134956 2813970..2814791 1 NC_011761.1 identified by similarity to SP:P21631; match to protein family HMM PF00590; match to protein family HMM TIGR01469; uroporphyrin-III C-methyltransferase 2814791 cobA 7134956 cobA Acidithiobacillus ferrooxidans ATCC 23270 uroporphyrin-III C-methyltransferase YP_002427488.1 2813970 D 243159 CDS YP_002427489.1 218665740 7137097 2814788..2815141 1 NC_011761.1 identified by similarity to GB:CAD16125.1; match to protein family HMM PF01903; hypothetical protein 2815141 7137097 AFE_3127 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427489.1 2814788 D 243159 CDS YP_002427490.1 218665174 7136055 2815171..2815677 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2815677 7136055 AFE_3128 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427490.1 2815171 D 243159 CDS YP_002427491.1 218665965 7134326 complement(2815696..2817099) 1 NC_011761.1 identified by match to protein family HMM PF00654; voltage-gated chloride channel 2817099 7134326 AFE_3129 Acidithiobacillus ferrooxidans ATCC 23270 voltage-gated chloride channel YP_002427491.1 2815696 R 243159 CDS YP_002427492.1 218666677 7134176 2817239..2817565 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2817565 7134176 AFE_3130 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427492.1 2817239 D 243159 CDS YP_002427493.1 218667760 7134548 complement(2817574..2817822) 1 NC_011761.1 identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin-arginine translocation protein, TatA/E family 2817822 7134548 AFE_3131 Acidithiobacillus ferrooxidans ATCC 23270 twin-arginine translocation protein, TatA/E family YP_002427493.1 2817574 R 243159 CDS YP_002427494.1 218666179 7134435 2818259..2818486 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2818486 7134435 AFE_3132 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427494.1 2818259 D 243159 CDS YP_002427495.1 218667920 7134080 complement(2818547..2819356) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2819356 7134080 AFE_3133 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427495.1 2818547 R 243159 CDS YP_002427496.1 218665603 7135227 2819723..2819887 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2819887 7135227 AFE_3134 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427496.1 2819723 D 243159 CDS YP_002427497.1 218667188 7135546 2820227..2820631 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2820631 7135546 AFE_3135 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427497.1 2820227 D 243159 CDS YP_002427498.1 218666345 7135581 2821701..2822954 1 NC_011761.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2822954 7135581 AFE_3136 Acidithiobacillus ferrooxidans ATCC 23270 sensor histidine kinase YP_002427498.1 2821701 D 243159 CDS YP_002427499.1 218665053 7136484 2823014..2823529 1 NC_011761.1 identified by match to protein family HMM PF00072; match to protein family HMM PF02954; DNA-binding response regulator 2823529 7136484 AFE_3137 Acidithiobacillus ferrooxidans ATCC 23270 DNA-binding response regulator YP_002427499.1 2823014 D 243159 CDS YP_002427500.1 218668131 7134982 complement(2823588..2824229) 1 NC_011761.1 identified by match to protein family HMM PF03171; 2OG-Fe(II) oxygenase 2824229 7134982 AFE_3138 Acidithiobacillus ferrooxidans ATCC 23270 2OG-Fe(II) oxygenase YP_002427500.1 2823588 R 243159 CDS YP_002427501.1 218665076 7136868 complement(2824347..2824874) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2824874 7136868 AFE_3139 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427501.1 2824347 R 243159 CDS YP_002427502.1 218667685 7135005 complement(2824886..2824978) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2824978 7135005 AFE_3140 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427502.1 2824886 R 243159 CDS YP_002427503.1 218667768 7135468 complement(2824988..2825428) 1 NC_011761.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 2825428 7135468 AFE_3141 Acidithiobacillus ferrooxidans ATCC 23270 Rrf2 family protein YP_002427503.1 2824988 R 243159 CDS YP_002427504.1 218665537 7134443 complement(2825443..2826636) 1 NC_011761.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 2826636 7134443 AFE_3142 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002427504.1 2825443 R 243159 CDS YP_002427505.1 218667769 7135909 complement(2826656..2827600) 1 NC_011761.1 identified by similarity to SP:P56938; match to protein family HMM PF01040; match to protein family HMM TIGR01473; protoheme IX farnesyltransferase 2827600 cyoE-2 7135909 cyoE-2 Acidithiobacillus ferrooxidans ATCC 23270 protoheme IX farnesyltransferase YP_002427505.1 2826656 R 243159 CDS YP_002427506.1 218665762 7134444 complement(2827616..2828443) 1 NC_011761.1 hypothetical protein 2828443 7134444 AFE_3144 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427506.1 2827616 R 243159 CDS YP_002427507.1 218666803 7136077 complement(2828694..2828810) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2828810 7136077 AFE_3145 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427507.1 2828694 R 243159 CDS YP_002427508.1 218667863 7137052 complement(2828862..2829425) 1 NC_011761.1 identified by similarity to SP:P24930; match to protein family HMM TIGR03095; rusticyanin 2829425 rus 7137052 rus Acidithiobacillus ferrooxidans ATCC 23270 rusticyanin YP_002427508.1 2828862 R 243159 CDS YP_002427509.1 218665814 7134941 complement(2829793..2829987) 1 NC_011761.1 identified by similarity to GB:BAC22706.1; cytochrome c oxidase, aa3-type, subunit IV 2829987 coxD 7134941 coxD Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c oxidase, aa3-type, subunit IV YP_002427509.1 2829793 R 243159 CDS YP_002427510.1 218665077 7135368 complement(2830028..2830582) 1 NC_011761.1 identified by similarity to GB:CAA07036.1; cytochrome c oxidase, aa3-type, subunit III 2830582 coxC 7135368 coxC Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c oxidase, aa3-type, subunit III YP_002427510.1 2830028 R 243159 CDS YP_002427511.1 218666284 7135006 complement(2830602..2832485) 1 NC_011761.1 identified by similarity to GB:CAA07035.1; match to protein family HMM PF00115; cytochrome c oxidase, aa3-type, subunit I 2832485 coxA 7135006 coxA Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c oxidase, aa3-type, subunit I YP_002427511.1 2830602 R 243159 CDS YP_002427512.1 218666149 7137292 complement(2832542..2833306) 1 NC_011761.1 identified by similarity to GB:CAA07034.1; match to protein family HMM PF00116; cytochrome c oxidase, aa3-type, subunit II 2833306 coxB 7137292 coxB Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c oxidase, aa3-type, subunit II YP_002427512.1 2832542 R 243159 CDS YP_002427513.1 218665466 7134049 complement(2833321..2833872) 1 NC_011761.1 identified by similarity to GB:CAA07033.2; hypothetical protein 2833872 7134049 AFE_3151 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427513.1 2833321 R 243159 CDS YP_002427514.1 218667078 7135079 complement(2833974..2834666) 1 NC_011761.1 identified by similarity to SP:P74917; match to protein family HMM PF00034; cytochrome c552 2834666 cyc1 7135079 cyc1 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c552 YP_002427514.1 2833974 R 243159 CDS YP_002427515.1 218666819 7136678 complement(2834678..2836135) 1 NC_011761.1 identified by similarity to GB:CAA07031.1; cytochrome c 2836135 cyc2 7136678 cyc2 Acidithiobacillus ferrooxidans ATCC 23270 cytochrome c YP_002427515.1 2834678 R 243159 CDS YP_002427516.1 218665779 7137068 2836820..2837512 1 NC_011761.1 identified by match to protein family HMM PF03050; ISAfe4, transposase orf3, degenerate 2837512 7137068 AFE_3154 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe4, transposase orf3, degenerate YP_002427516.1 2836820 D 243159 CDS YP_002427517.1 218667878 7136094 complement(2837552..2838664) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2838664 7136094 AFE_3155 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427517.1 2837552 R 243159 CDS YP_002427518.1 218666477 7136537 2839069..2839290 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2839290 7136537 AFE_3156 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427518.1 2839069 D 243159 CDS YP_002427519.1 218665356 7136287 complement(2839388..2839681) 1 NC_011761.1 identified by similarity to GB:AAK61303.1; ISAfe6, transposase, degenerate 2839681 7136287 AFE_3157 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe6, transposase, degenerate YP_002427519.1 2839388 R 243159 CDS YP_002427520.1 218667400 7136138 complement(2839779..2841668) 1 NC_011761.1 identified by similarity to SP:P10413; match to protein family HMM PF00183; match to protein family HMM PF02518; heat shock protein HtpG 2841668 htpG 7136138 htpG Acidithiobacillus ferrooxidans ATCC 23270 heat shock protein HtpG YP_002427520.1 2839779 R 243159 CDS YP_002427521.1 218666282 7136923 2841714..2841863 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2841863 7136923 AFE_3160 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427521.1 2841714 D 243159 CDS YP_002427522.1 218667352 7137290 complement(2841856..2842176) 1 NC_011761.1 identified by similarity to PIR:S76457; hypothetical protein 2842176 7137290 AFE_3159 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427522.1 2841856 R 243159 CDS YP_002427523.1 218665593 7136874 complement(2842362..2843357) 1 NC_011761.1 identified by match to protein family HMM PF00389; match to protein family HMM PF02826; D-isomer specific 2-hydroxyacid dehydrogenase family protein 2843357 7136874 AFE_3161 Acidithiobacillus ferrooxidans ATCC 23270 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_002427523.1 2842362 R 243159 CDS YP_002427524.1 218666110 7135536 complement(2844062..2844547) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2844547 7135536 AFE_3162 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002427524.1 2844062 R 243159 CDS YP_002427525.1 218666804 7137031 complement(2844650..2844970) 1 NC_011761.1 catalyzes the second reaction in the pyochelin biosynthetic pathway, the conversion of isochorismate to salicylate and pyruvate.; isochorismate-pyruvate lyase 2844970 7137031 AFE_3163 Acidithiobacillus ferrooxidans ATCC 23270 isochorismate-pyruvate lyase YP_002427525.1 2844650 R 243159 CDS YP_002427526.1 218667646 7137053 complement(2845001..2845648) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2845648 7137053 AFE_3164 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein YP_002427526.1 2845001 R 243159 CDS YP_002427527.1 218665030 7135820 complement(2845659..2846879) 1 NC_011761.1 hypothetical protein 2846879 7135820 AFE_3165 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427527.1 2845659 R 243159 CDS YP_002427528.1 218665544 7134958 complement(2847007..2847468) 1 NC_011761.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 2847468 7134958 AFE_3166 Acidithiobacillus ferrooxidans ATCC 23270 GNAT family acetyltransferase YP_002427528.1 2847007 R 243159 CDS YP_002427529.1 218665761 7134713 complement(2848227..2848874) 1 NC_011761.1 identified by similarity to PIR:B83761; hypothetical protein 2848874 7134713 AFE_3168 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427529.1 2848227 R 243159 CDS YP_002427530.1 218666748 7136076 complement(2848885..2849370) 1 NC_011761.1 identified by similarity to GB:CAD16379.1; match to protein family HMM PF07883; hypothetical protein 2849370 7136076 AFE_3169 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427530.1 2848885 R 243159 CDS YP_002427531.1 218667175 7137243 complement(2849372..2849839) 1 NC_011761.1 identified by similarity to GB:AAQ59281.1; hypothetical protein 2849839 7137243 AFE_3170 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427531.1 2849372 R 243159 CDS YP_002427532.1 218668158 7135656 complement(2850264..2850662) 1 NC_011761.1 identified by match to protein family HMM PF00903; glyoxalase family protein 2850662 7135656 AFE_3172 Acidithiobacillus ferrooxidans ATCC 23270 glyoxalase family protein YP_002427532.1 2850264 R 243159 CDS YP_002427533.1 218665111 7135977 complement(2850902..2851327) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2851327 7135977 AFE_3173 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427533.1 2850902 R 243159 CDS YP_002427534.1 218665847 7134262 complement(2851317..2851820) 1 NC_011761.1 prevent-host-death family protein 2851820 7134262 AFE_3174 Acidithiobacillus ferrooxidans ATCC 23270 prevent-host-death family protein YP_002427534.1 2851317 R 243159 CDS YP_002427535.1 218667912 7135402 2853012..2853968 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2853968 7135402 AFE_3175 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427535.1 2853012 D 243159 CDS YP_002427536.1 218667625 7135219 complement(2853973..2854800) 1 NC_011761.1 identified by match to protein family HMM PF01695; ISAfe9, transposition helper protein 2854800 7135219 AFE_3176 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe9, transposition helper protein YP_002427536.1 2853973 R 243159 CDS YP_002427537.1 218666484 7135799 complement(2854797..2856281) 1 NC_011761.1 identified by match to protein family HMM PF00665; ISAfe9, transposase 2856281 7135799 AFE_3177 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe9, transposase YP_002427537.1 2854797 R 243159 CDS YP_002427538.1 218667042 7136294 2856479..2856748 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2856748 7136294 AFE_3178 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427538.1 2856479 D 243159 CDS YP_002427539.1 218667315 7136642 2856718..2856891 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2856891 7136642 AFE_3179 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427539.1 2856718 D 243159 CDS YP_002427540.1 218667527 7135159 2856858..2857016 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2857016 7135159 AFE_3180 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427540.1 2856858 D 243159 CDS YP_002427541.1 218665268 7134074 complement(2858272..2859300) 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe1, transposase 2859300 7134074 AFE_3183 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe1, transposase YP_002427541.1 2858272 R 243159 CDS YP_002427542.1 218666245 7134357 complement(2861419..2862336) 1 NC_011761.1 identified by similarity to SP:P24202; match to protein family HMM PF04471; Mrr restriction system protein 2862336 mrr 7134357 mrr Acidithiobacillus ferrooxidans ATCC 23270 Mrr restriction system protein YP_002427542.1 2861419 R 243159 CDS YP_002427543.1 218667975 7136602 2862792..2863064 1 NC_011761.1 transposase. degenerate 2863064 7136602 AFE_3187 Acidithiobacillus ferrooxidans ATCC 23270 transposase. degenerate YP_002427543.1 2862792 D 243159 CDS YP_002427544.1 218667576 7134739 2863235..2863513 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2863513 7134739 AFE_3188 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427544.1 2863235 D 243159 CDS YP_002427545.1 218666047 7135747 complement(2864024..2864887) 1 NC_011761.1 identified by similarity to GB:CAD18424.1; hypothetical protein 2864887 7135747 AFE_3189 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427545.1 2864024 R 243159 CDS YP_002427546.1 218667492 7136967 complement(2864900..2865031) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2865031 7136967 AFE_3190 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427546.1 2864900 R 243159 CDS YP_002427547.1 218667185 7136786 2865496..2868222 1 NC_011761.1 identified by match to protein family HMM PF04851; type III restriction-modification system, Res subunit 2868222 7136786 AFE_3191 Acidithiobacillus ferrooxidans ATCC 23270 type III restriction-modification system, Res subunit YP_002427547.1 2865496 D 243159 CDS YP_002427548.1 218665780 7134735 2868225..2870480 1 NC_011761.1 identified by match to protein family HMM PF01555; type III restriction-modification system, Mod subunit 2870480 7134735 AFE_3192 Acidithiobacillus ferrooxidans ATCC 23270 type III restriction-modification system, Mod subunit YP_002427548.1 2868225 D 243159 CDS YP_002427549.1 218667470 7136095 2870533..2873217 1 NC_011761.1 PHP domain-containing protein 2873217 7136095 AFE_3193 Acidithiobacillus ferrooxidans ATCC 23270 PHP domain-containing protein YP_002427549.1 2870533 D 243159 CDS YP_002427550.1 218667481 7136762 2873220..2874431 1 NC_011761.1 identified by similarity to SP:O50224; match to protein family HMM PF04326; ATP-dependent DNA helicase RecG domain-containing protein 2874431 7136762 AFE_3194 Acidithiobacillus ferrooxidans ATCC 23270 ATP-dependent DNA helicase RecG domain-containing protein YP_002427550.1 2873220 D 243159 CDS YP_002427551.1 218666023 7136773 complement(2874471..2876102) 1 NC_011761.1 identified by similarity to PIR:T45498; Tn5468, orf5 2876102 7136773 AFE_3195 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, orf5 YP_002427551.1 2874471 R 243159 CDS YP_002427552.1 218667113 7134239 complement(2876122..2877951) 1 NC_011761.1 identified by similarity to PIR:T45497; Tn5468, transposition protein D 2877951 tnsD-2 7134239 tnsD-2 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposition protein D YP_002427552.1 2876122 R 243159 CDS YP_002427553.1 218667073 7136713 complement(2877963..2879618) 1 NC_011761.1 identified by similarity to PIR:T45496; Tn5468, transposition protein C 2879618 tnsC-2 7136713 tnsC-2 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposition protein C YP_002427553.1 2877963 R 243159 CDS YP_002427554.1 218666497 7136673 complement(2879602..2881767) 1 NC_011761.1 identified by similarity to PIR:T45495; match to protein family HMM PF00665; Tn5468, transposase B 2881767 tnsB-2 7136673 tnsB-2 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposase B YP_002427554.1 2879602 R 243159 CDS YP_002427555.1 218666184 7136309 complement(2881764..2882600) 1 NC_011761.1 identified by similarity to PIR:T45494; match to protein family HMM PF08721; match to protein family HMM PF08722; Tn5468, transposase A 2882600 tnsA-2 7136309 tnsA-2 Acidithiobacillus ferrooxidans ATCC 23270 Tn5468, transposase A YP_002427555.1 2881764 R 243159 CDS YP_002427556.1 218668085 7134085 complement(2882774..2884609) 1 NC_011761.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glucosamine--fructose-6-phosphate aminotransferase 2884609 glmS 7134085 glmS Acidithiobacillus ferrooxidans ATCC 23270 glucosamine--fructose-6-phosphate aminotransferase YP_002427556.1 2882774 R 243159 CDS YP_002427557.1 218665153 7136821 complement(2884655..2886022) 1 NC_011761.1 identified by similarity to SP:P17114; match to protein family HMM PF00132; match to protein family HMM PF00483; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine pyrophosphorylase 2886022 glmU 7136821 glmU Acidithiobacillus ferrooxidans ATCC 23270 UDP-N-acetylglucosamine pyrophosphorylase YP_002427557.1 2884655 R 243159 CDS YP_002427558.1 218666899 7134305 complement(2886151..2886576) 1 NC_011761.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 2886576 atpC 7134305 atpC Acidithiobacillus ferrooxidans ATCC 23270 F0F1 ATP synthase subunit epsilon YP_002427558.1 2886151 R 243159 CDS YP_002427559.1 218665303 7134609 complement(2886580..2887989) 1 NC_011761.1 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1 subunit beta 2887989 atpD 7134609 atpD Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F1 subunit beta YP_002427559.1 2886580 R 243159 CDS YP_002427560.1 218667556 7136244 complement(2888031..2888897) 1 NC_011761.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 2888897 atpG 7136244 atpG Acidithiobacillus ferrooxidans ATCC 23270 F0F1 ATP synthase subunit gamma YP_002427560.1 2888031 R 243159 CDS YP_002427561.1 218665445 7136422 complement(2888907..2890451) 1 NC_011761.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 2890451 atpA 7136422 atpA Acidithiobacillus ferrooxidans ATCC 23270 F0F1 ATP synthase subunit alpha YP_002427561.1 2888907 R 243159 CDS YP_002427562.1 218668130 7135057 complement(2890468..2891007) 1 NC_011761.1 identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 2891007 atpH 7135057 atpH Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F1 subunit delta YP_002427562.1 2890468 R 243159 CDS YP_002427563.1 218667443 7136867 complement(2891018..2891497) 1 NC_011761.1 identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B 2891497 atpF 7136867 atpF Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F0 subunit B YP_002427563.1 2891018 R 243159 CDS YP_002427564.1 218666764 7136733 complement(2891540..2891794) 1 NC_011761.1 identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 2891794 atpE 7136733 atpE Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F0 subunit C YP_002427564.1 2891540 R 243159 CDS YP_002427565.1 218666392 7137260 complement(2891836..2892585) 1 NC_011761.1 identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0 subunit A 2892585 atpB 7137260 atpB Acidithiobacillus ferrooxidans ATCC 23270 ATP synthase F0 subunit A YP_002427565.1 2891836 R 243159 CDS YP_002427566.1 218667809 7134336 complement(2892588..2892959) 1 NC_011761.1 identified by similarity to PIR:F82716; hypothetical protein 2892959 7134336 AFE_3210 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427566.1 2892588 R 243159 CDS YP_002427567.1 218667994 7134484 complement(2893014..2893898) 1 NC_011761.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; parB family protein 2893898 7134484 AFE_3211 Acidithiobacillus ferrooxidans ATCC 23270 parB family protein YP_002427567.1 2893014 R 243159 CDS YP_002427568.1 218666261 7134758 complement(2893895..2894677) 1 NC_011761.1 identified by similarity to SP:O05189; match to protein family HMM PF01656; chromosome partitioning protein parA 2894677 7134758 AFE_3212 Acidithiobacillus ferrooxidans ATCC 23270 chromosome partitioning protein parA YP_002427568.1 2893895 R 243159 CDS YP_002427569.1 218665157 7136618 complement(2894724..2895389) 1 NC_011761.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; methyltransferase GidB 2895389 gidB 7136618 gidB Acidithiobacillus ferrooxidans ATCC 23270 methyltransferase GidB YP_002427569.1 2894724 R 243159 CDS YP_002427570.1 218668068 7134309 complement(2895394..2897268) 1 NC_011761.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 2897268 gidA 7134309 gidA Acidithiobacillus ferrooxidans ATCC 23270 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002427570.1 2895394 R 243159 CDS YP_002427571.1 218666222 7136804 complement(2897287..2897736) 1 NC_011761.1 lipoprotein 2897736 7136804 AFE_3215 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427571.1 2897287 R 243159 CDS YP_002427572.1 218665549 7136578 complement(2897724..2898263) 1 NC_011761.1 identified by similarity to GB:AAN54046.1; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein 2898263 7136578 AFE_3216 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427572.1 2897724 R 243159 CDS YP_002427573.1 218667048 7135921 complement(2898273..2898815) 1 NC_011761.1 identified by similarity to SP:P30746; match to protein family HMM PF00994; match to protein family HMM TIGR00177; match to protein family HMM TIGR02667; molybdenum cofactor biosynthesis protein B 2898815 moaB 7135921 moaB Acidithiobacillus ferrooxidans ATCC 23270 molybdenum cofactor biosynthesis protein B YP_002427573.1 2898273 R 243159 CDS YP_002427574.1 218667918 7136648 2898964..2899899 1 NC_011761.1 identified by match to protein family HMM PF01544; magnesium and cobalt transport protein 2899899 7136648 AFE_3218 Acidithiobacillus ferrooxidans ATCC 23270 magnesium and cobalt transport protein YP_002427574.1 2898964 D 243159 CDS YP_002427575.1 218667441 7135225 2899930..2900871 1 NC_011761.1 identified by match to protein family HMM PF01544; magnesium and cobalt transport protein 2900871 7135225 AFE_3219 Acidithiobacillus ferrooxidans ATCC 23270 magnesium and cobalt transport protein YP_002427575.1 2899930 D 243159 CDS YP_002427576.1 218666118 7136731 2900879..2901778 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2901778 7136731 AFE_3220 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427576.1 2900879 D 243159 CDS YP_002427577.1 218667439 7134017 2901797..2902708 1 NC_011761.1 identified by match to protein family HMM PF01544; magnesium and cobalt transport protein 2902708 7134017 AFE_3221 Acidithiobacillus ferrooxidans ATCC 23270 magnesium and cobalt transport protein YP_002427577.1 2901797 D 243159 CDS YP_002427578.1 218668038 7136729 complement(2902789..2903859) 1 NC_011761.1 identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase family protein 2903859 7136729 AFE_3222 Acidithiobacillus ferrooxidans ATCC 23270 ADP-ribosylglycohydrolase family protein YP_002427578.1 2902789 R 243159 CDS YP_002427579.1 218667689 7134803 2904250..2904702 1 NC_011761.1 identified by similarity to SP:P30849; WrbA family protein 2904702 7134803 AFE_3223 Acidithiobacillus ferrooxidans ATCC 23270 WrbA family protein YP_002427579.1 2904250 D 243159 CDS YP_002427580.1 218666960 7135472 2904706..2905578 1 NC_011761.1 identified by similarity to SP:O00625; match to protein family HMM PF02678; match to protein family HMM PF05726; pirin family protein 2905578 7135472 AFE_3224 Acidithiobacillus ferrooxidans ATCC 23270 pirin family protein YP_002427580.1 2904706 D 243159 CDS YP_002427581.1 218666077 7134823 2905627..2905788 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2905788 7134823 AFE_3225 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427581.1 2905627 D 243159 CDS YP_002427582.1 218668097 7136997 2905800..2906462 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2906462 7136997 AFE_3227 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427582.1 2905800 D 243159 CDS YP_002427583.1 218665155 7136580 complement(2906887..2907066) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2907066 7136580 AFE_3228 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427583.1 2906887 R 243159 CDS YP_002427584.1 218668164 7134307 2907212..2909518 1 NC_011761.1 identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent receptor 2909518 7134307 AFE_3229 Acidithiobacillus ferrooxidans ATCC 23270 TonB-dependent receptor YP_002427584.1 2907212 D 243159 CDS YP_002427585.1 218665843 7135983 2909604..2912399 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2912399 7135983 AFE_3230 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427585.1 2909604 D 243159 CDS YP_002427586.1 218667705 7135682 2912850..2912948 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2912948 7135682 AFE_3232 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427586.1 2912850 D 243159 CDS YP_002427587.1 218665826 7136025 complement(2913326..2913916) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2913916 7136025 AFE_3234 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427587.1 2913326 R 243159 CDS YP_002427588.1 218665659 7135380 complement(2914011..2914787) 1 NC_011761.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR01291; ABC-2 type transporter permease, NodJ family 2914787 7135380 AFE_3235 Acidithiobacillus ferrooxidans ATCC 23270 ABC-2 type transporter permease, NodJ family YP_002427588.1 2914011 R 243159 CDS YP_002427589.1 218667391 7137142 complement(2914787..2915716) 1 NC_011761.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein, NodI family 2915716 7137142 AFE_3236 Acidithiobacillus ferrooxidans ATCC 23270 ABC transporter ATP-binding protein, NodI family YP_002427589.1 2914787 R 243159 CDS YP_002427590.1 218667028 7136914 complement(2915697..2916365) 1 NC_011761.1 identified by similarity to GB:AAO91263.1; hypothetical protein 2916365 7136914 AFE_3237 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427590.1 2915697 R 243159 CDS YP_002427591.1 218667590 7134893 complement(2916425..2916742) 1 NC_011761.1 identified by similarity to SP:P07324; ferredoxin 2916742 7134893 AFE_3238 Acidithiobacillus ferrooxidans ATCC 23270 ferredoxin YP_002427591.1 2916425 R 243159 CDS YP_002427592.1 218667951 7135761 2916815..2917441 1 NC_011761.1 Coq7 family protein 2917441 7135761 AFE_3239 Acidithiobacillus ferrooxidans ATCC 23270 Coq7 family protein YP_002427592.1 2916815 D 243159 CDS YP_002427593.1 218665081 7135258 complement(2917446..2917973) 1 NC_011761.1 identified by match to protein family HMM PF02082; match to protein family HMM TIGR00738; Rrf2 family protein 2917973 7135258 AFE_3240 Acidithiobacillus ferrooxidans ATCC 23270 Rrf2 family protein YP_002427593.1 2917446 R 243159 CDS YP_002427594.1 218668162 7135010 complement(2917945..2918370) 1 NC_011761.1 identified by match to protein family HMM PF02566; OsmC/Ohr family protein 2918370 7135010 AFE_3241 Acidithiobacillus ferrooxidans ATCC 23270 OsmC/Ohr family protein YP_002427594.1 2917945 R 243159 CDS YP_002427595.1 218667332 7135981 complement(2918441..2919232) 1 NC_011761.1 identified by similarity to SP:P20577; match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 2919232 trpC 7135981 trpC Acidithiobacillus ferrooxidans ATCC 23270 indole-3-glycerol phosphate synthase YP_002427595.1 2918441 R 243159 CDS YP_002427596.1 218667417 7135177 complement(2919236..2920252) 1 NC_011761.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2920252 trpD 7135177 trpD Acidithiobacillus ferrooxidans ATCC 23270 anthranilate phosphoribosyltransferase YP_002427596.1 2919236 R 243159 CDS YP_002427597.1 218666096 7136941 complement(2920249..2920821) 1 NC_011761.1 identified by similarity to PIR:A01122; match to protein family HMM PF00117; match to protein family HMM TIGR00566; para-aminobenzoate synthase glutamine amidotransferase component II 2920821 pabA 7136941 pabA Acidithiobacillus ferrooxidans ATCC 23270 para-aminobenzoate synthase glutamine amidotransferase component II YP_002427597.1 2920249 R 243159 CDS YP_002427598.1 218665515 7137017 complement(2920805..2922322) 1 NC_011761.1 identified by similarity to PIR:A39128; match to protein family HMM PF00425; match to protein family HMM PF04715; match to protein family HMM TIGR00564; anthranilate synthase component I 2922322 trpE 7137017 trpE Acidithiobacillus ferrooxidans ATCC 23270 anthranilate synthase component I YP_002427598.1 2920805 R 243159 CDS YP_002427599.1 218667834 7135886 complement(2922433..2923116) 1 NC_011761.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01449; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; phosphoglycolate phosphatase 2923116 gph-2 7135886 gph-2 Acidithiobacillus ferrooxidans ATCC 23270 phosphoglycolate phosphatase YP_002427599.1 2922433 R 243159 CDS YP_002427600.1 218667831 7134912 complement(2923120..2923782) 1 NC_011761.1 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 2923782 rpe 7134912 rpe Acidithiobacillus ferrooxidans ATCC 23270 ribulose-phosphate 3-epimerase YP_002427600.1 2923120 R 243159 CDS YP_002427601.1 218667124 7134909 complement(2923847..2924917) 1 NC_011761.1 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01521; fructose-bisphosphate aldolase 2924917 fba 7134909 fba Acidithiobacillus ferrooxidans ATCC 23270 fructose-bisphosphate aldolase YP_002427601.1 2923847 R 243159 CDS YP_002427602.1 218665723 7134670 complement(2925025..2926464) 1 NC_011761.1 identified by similarity to SP:P21599; match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase II 2926464 pykA 7134670 pykA Acidithiobacillus ferrooxidans ATCC 23270 pyruvate kinase II YP_002427602.1 2925025 R 243159 CDS YP_002427603.1 218666615 7136038 complement(2926461..2927666) 1 NC_011761.1 identified by similarity to SP:P11665; match to protein family HMM PF00162; phosphoglycerate kinase 2927666 pgk 7136038 pgk Acidithiobacillus ferrooxidans ATCC 23270 phosphoglycerate kinase YP_002427603.1 2926461 R 243159 CDS YP_002427604.1 218665917 7135346 complement(2927681..2928697) 1 NC_011761.1 identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I 2928697 gap 7135346 gap Acidithiobacillus ferrooxidans ATCC 23270 glyceraldehyde-3-phosphate dehydrogenase, type I YP_002427604.1 2927681 R 243159 CDS YP_002427605.1 218666292 7134127 complement(2928732..2930723) 1 NC_011761.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 2930723 tkt-2 7134127 tkt-2 Acidithiobacillus ferrooxidans ATCC 23270 transketolase YP_002427605.1 2928732 R 243159 CDS YP_002427606.1 218667605 7137300 complement(2930755..2931699) 1 NC_011761.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2931699 glpX 7137300 glpX Acidithiobacillus ferrooxidans ATCC 23270 fructose 1,6-bisphosphatase II YP_002427606.1 2930755 R 243159 CDS YP_002427607.1 218665413 7135779 complement(2931758..2932585) 1 NC_011761.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 2932585 7135779 AFE_3254 Acidithiobacillus ferrooxidans ATCC 23270 inositol monophosphatase family protein YP_002427607.1 2931758 R 243159 CDS YP_002427608.1 218667941 7136195 complement(2932609..2933046) 1 NC_011761.1 identified by similarity to GB:CAD85827.1; hypothetical protein 2933046 7136195 AFE_3255 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427608.1 2932609 R 243159 CDS YP_002427609.1 218665472 7135248 complement(2932970..2933128) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2933128 7135248 AFE_3256 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427609.1 2932970 R 243159 CDS YP_002427610.1 218666821 7135085 2933114..2933839 1 NC_011761.1 identified by similarity to GB:AAM42157.1; match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein 2933839 7135085 AFE_3257 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427610.1 2933114 D 243159 CDS YP_002427611.1 218665147 7137070 2933928..2934878 1 NC_011761.1 identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2934878 ispH 7137070 ispH Acidithiobacillus ferrooxidans ATCC 23270 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002427611.1 2933928 D 243159 CDS YP_002427612.1 218666208 7134299 complement(2934917..2936377) 1 NC_011761.1 identified by similarity to SP:P27850; match to protein family HMM PF02646; DNA recombination protein RmuC 2936377 7134299 AFE_3259 Acidithiobacillus ferrooxidans ATCC 23270 DNA recombination protein RmuC YP_002427612.1 2934917 R 243159 CDS YP_002427613.1 218665701 7136564 complement(2936484..2936939) 1 NC_011761.1 identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 2936939 mscL 7136564 mscL Acidithiobacillus ferrooxidans ATCC 23270 large conductance mechanosensitive channel protein YP_002427613.1 2936484 R 243159 CDS YP_002427614.1 218666595 7137184 complement(2937050..2937562) 1 NC_011761.1 lipoprotein 2937562 7137184 AFE_3261 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427614.1 2937050 R 243159 CDS YP_002427615.1 218667792 7135325 complement(2937596..2940706) 1 NC_011761.1 identified by match to protein family HMM PF00873; transporter AcrB/AcrD/AcrF family 2940706 7135325 AFE_3262 Acidithiobacillus ferrooxidans ATCC 23270 transporter AcrB/AcrD/AcrF family YP_002427615.1 2937596 R 243159 CDS YP_002427616.1 218666468 7134467 2941025..2942251 1 NC_011761.1 identified by match to protein family HMM PF01548; match to protein family HMM PF02371; ISAfe3, transposase 2942251 7134467 AFE_3263 Acidithiobacillus ferrooxidans ATCC 23270 ISAfe3, transposase YP_002427616.1 2941025 D 243159 CDS YP_002427617.1 218668159 7136278 complement(2942256..2943389) 1 NC_011761.1 identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 2943389 7136278 AFE_3264 Acidithiobacillus ferrooxidans ATCC 23270 RND family efflux transporter MFP subunit YP_002427617.1 2942256 R 243159 CDS YP_002427618.1 218667709 7135978 complement(2943386..2944816) 1 NC_011761.1 identified by match to protein family HMM PF02321; outer membrane efflux protein 2944816 7135978 AFE_3265 Acidithiobacillus ferrooxidans ATCC 23270 outer membrane efflux protein YP_002427618.1 2943386 R 243159 CDS YP_002427619.1 218668034 7135492 complement(2945212..2945352) 1 NC_011761.1 hypothetical protein 2945352 7135492 AFE_3266 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427619.1 2945212 R 243159 CDS YP_002427620.1 218665589 7134799 complement(2945466..2945909) 1 NC_011761.1 identified by match to protein family HMM PF02639; YaiI/YqxD family protein 2945909 7134799 AFE_3267 Acidithiobacillus ferrooxidans ATCC 23270 YaiI/YqxD family protein YP_002427620.1 2945466 R 243159 CDS YP_002427621.1 218667137 7135532 2946113..2946406 1 NC_011761.1 identified by match to protein family HMM TIGR01552; prevent-host-death family protein 2946406 7135532 AFE_3268 Acidithiobacillus ferrooxidans ATCC 23270 prevent-host-death family protein YP_002427621.1 2946113 D 243159 CDS YP_002427622.1 218665388 7134684 2946422..2946844 1 NC_011761.1 identified by similarity to GB:CAD85533.1; match to protein family HMM TIGR00305; hypothetical protein 2946844 7134684 AFE_3269 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427622.1 2946422 D 243159 CDS YP_002427623.1 218666059 7136170 2947117..2948676 1 NC_011761.1 hypothetical protein 2948676 7136170 AFE_3270 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427623.1 2947117 D 243159 CDS YP_002427624.1 218665410 7136979 complement(2949653..2949847) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2949847 7136979 AFE_3271 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427624.1 2949653 R 243159 CDS YP_002427625.1 218666058 7136192 complement(2950598..2950876) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2950876 7136192 AFE_3272 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427625.1 2950598 R 243159 CDS YP_002427626.1 218665344 7136978 2950860..2951315 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2951315 7136978 AFE_3273 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427626.1 2950860 D 243159 CDS YP_002427627.1 218666606 7136125 2951316..2952053 1 NC_011761.1 identified by similarity to SP:P03025; match to protein family HMM PF00072; match to protein family HMM PF00486; transcriptional regulator OmpR 2952053 7136125 AFE_3274 Acidithiobacillus ferrooxidans ATCC 23270 transcriptional regulator OmpR YP_002427627.1 2951316 D 243159 CDS YP_002427628.1 218666234 7135337 2952059..2953321 1 NC_011761.1 identified by similarity to SP:P02933; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; osmolarity sensor protein EnvZ 2953321 7135337 AFE_3275 Acidithiobacillus ferrooxidans ATCC 23270 osmolarity sensor protein EnvZ YP_002427628.1 2952059 D 243159 CDS YP_002427629.1 218665644 7136591 complement(2953333..2953659) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2953659 7136591 AFE_3276 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427629.1 2953333 R 243159 CDS YP_002427630.1 218666834 7137127 2953803..2955191 1 NC_011761.1 identified by similarity to SP:O34858; match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase 2955191 argH 7137127 argH Acidithiobacillus ferrooxidans ATCC 23270 argininosuccinate lyase YP_002427630.1 2953803 D 243159 CDS YP_002427631.1 218667011 7137083 2955188..2955373 1 NC_011761.1 lipoprotein 2955373 7137083 AFE_3278 Acidithiobacillus ferrooxidans ATCC 23270 lipoprotein YP_002427631.1 2955188 D 243159 CDS YP_002427632.1 218666233 7134875 2955370..2956629 1 NC_011761.1 identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase 2956629 lysA 7134875 lysA Acidithiobacillus ferrooxidans ATCC 23270 diaminopimelate decarboxylase YP_002427632.1 2955370 D 243159 CDS YP_002427633.1 218667136 7136590 2956771..2957322 1 NC_011761.1 identified by similarity to GB:AAN68689.1; hypothetical protein 2957322 7136590 AFE_3280 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427633.1 2956771 D 243159 CDS YP_002427634.1 218665402 7134683 2957354..2957830 1 NC_011761.1 identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072; hydrogenase maturation protease 2957830 hynD 7134683 hynD Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase maturation protease YP_002427634.1 2957354 D 243159 CDS YP_002427635.1 218666520 7136184 2957823..2958233 1 NC_011761.1 hydrogenase expression protein 2958233 hynH 7136184 hynH Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase expression protein YP_002427635.1 2957823 D 243159 CDS YP_002427636.1 218667214 7136332 2958233..2959333 1 NC_011761.1 identified by match to protein family HMM PF01058; match to protein family HMM PF08425; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; [Ni/Fe] hydrogenase, small subunit 2959333 hynS 7136332 hynS Acidithiobacillus ferrooxidans ATCC 23270 [Ni/Fe] hydrogenase, small subunit YP_002427636.1 2958233 D 243159 CDS YP_002427637.1 218667785 7135608 2959323..2959988 1 NC_011761.1 hypothetical protein 2959988 isp1 7135608 isp1 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427637.1 2959323 D 243159 CDS YP_002427638.1 218667513 7134460 2959985..2961346 1 NC_011761.1 identified by match to protein family HMM PF00037; match to protein family HMM PF02754; iron-sulfur cluster-binding protein 2961346 isp2 7134460 isp2 Acidithiobacillus ferrooxidans ATCC 23270 iron-sulfur cluster-binding protein YP_002427638.1 2959985 D 243159 CDS YP_002427639.1 218665733 7136378 2961350..2963107 1 NC_011761.1 identified by similarity to GB:AAC38282.1; match to protein family HMM PF00374; [Ni/Fe] hydrogenase, large subunit 2963107 hynL 7136378 hynL Acidithiobacillus ferrooxidans ATCC 23270 [Ni/Fe] hydrogenase, large subunit YP_002427639.1 2961350 D 243159 CDS YP_002427640.1 218667616 7136048 2963176..2963517 1 NC_011761.1 identified by similarity to SP:P24189; match to protein family HMM PF01155; match to protein family HMM TIGR00100; hydrogenase nickel incorporation protein HypA 2963517 hypA-2 7136048 hypA-2 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase nickel incorporation protein HypA YP_002427640.1 2963176 D 243159 CDS YP_002427641.1 218665305 7135790 2963517..2964317 1 NC_011761.1 identified by similarity to SP:Q43949; match to protein family HMM PF02492; match to protein family HMM TIGR00073; hydrogenase nickel incorporation protein HypB 2964317 hypB-2 7135790 hypB-2 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase nickel incorporation protein HypB YP_002427641.1 2963517 D 243159 CDS YP_002427642.1 218666103 7136246 2964332..2964577 1 NC_011761.1 identified by similarity to SP:P31881; match to protein family HMM PF01455; match to protein family HMM TIGR00074; hydrogenase assembly chaperone HypC 2964577 hypC-2 7136246 hypC-2 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase assembly chaperone HypC YP_002427642.1 2964332 D 243159 CDS YP_002427643.1 218666603 7137024 2964574..2965686 1 NC_011761.1 identified by similarity to SP:P24192; match to protein family HMM PF01924; match to protein family HMM TIGR00075; hydrogenase expression/formation protein HypD 2965686 hypD-2 7137024 hypD-2 Acidithiobacillus ferrooxidans ATCC 23270 hydrogenase expression/formation protein HypD YP_002427643.1 2964574 D 243159 CDS YP_002427644.1 218665254 7135334 2965876..2966760 1 NC_011761.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 2966760 7135334 AFE_3291 Acidithiobacillus ferrooxidans ATCC 23270 NAD-dependent epimerase/dehydratase family protein YP_002427644.1 2965876 D 243159 CDS YP_002427645.1 218665545 7135743 2966757..2967788 1 NC_011761.1 identified by similarity to SP:Q51366; match to protein family HMM PF01370; match to protein family HMM TIGR01472; GDP-mannose 4,6-dehydratase 2967788 gmd-2 7135743 gmd-2 Acidithiobacillus ferrooxidans ATCC 23270 GDP-mannose 4,6-dehydratase YP_002427645.1 2966757 D 243159 CDS YP_002427646.1 218665335 7135917 2967785..2969224 1 NC_011761.1 identified by similarity to SP:P29956; match to protein family HMM PF00483; match to protein family HMM PF01050; match to protein family HMM PF07883; match to protein family HMM TIGR01479; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 2969224 7135917 AFE_3293 Acidithiobacillus ferrooxidans ATCC 23270 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_002427646.1 2967785 D 243159 CDS YP_002427647.1 218666255 7136277 complement(2969256..2969804) 1 NC_011761.1 identified by similarity to SP:P37780; match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 2969804 rfbC 7136277 rfbC Acidithiobacillus ferrooxidans ATCC 23270 dTDP-4-dehydrorhamnose 3,5-epimerase YP_002427647.1 2969256 R 243159 CDS YP_002427648.1 218666808 7136612 complement(2969801..2970685) 1 NC_011761.1 identified by similarity to SP:P55254; match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 2970685 rfbA 7136612 rfbA Acidithiobacillus ferrooxidans ATCC 23270 glucose-1-phosphate thymidylyltransferase YP_002427648.1 2969801 R 243159 CDS YP_002427649.1 218667924 7137057 2970883..2972259 1 NC_011761.1 identified by match to protein family HMM PF00083; match to protein family HMM PF07690; major facilitator family transporter 2972259 7137057 AFE_3296 Acidithiobacillus ferrooxidans ATCC 23270 major facilitator family transporter YP_002427649.1 2970883 D 243159 CDS YP_002427650.1 218668045 7135231 complement(2972273..2972965) 1 NC_011761.1 identified by match to protein family HMM TIGR01352; TonB family protein 2972965 7135231 AFE_3297 Acidithiobacillus ferrooxidans ATCC 23270 TonB family protein YP_002427650.1 2972273 R 243159 CDS YP_002427651.1 218665185 7134810 complement(2972934..2973926) 1 NC_011761.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2973926 hemB 7134810 hemB Acidithiobacillus ferrooxidans ATCC 23270 delta-aminolevulinic acid dehydratase YP_002427651.1 2972934 R 243159 CDS YP_002427652.1 218666649 7135671 complement(2973994..2974782) 1 NC_011761.1 identified by similarity to SP:P42452; match to protein family HMM PF02602; uroporphyrinogen-III synthase 2974782 hemD 7135671 hemD Acidithiobacillus ferrooxidans ATCC 23270 uroporphyrinogen-III synthase YP_002427652.1 2973994 R 243159 CDS YP_002427653.1 218666388 7134520 complement(2974779..2975699) 1 NC_011761.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 2975699 hemC 7134520 hemC Acidithiobacillus ferrooxidans ATCC 23270 porphobilinogen deaminase YP_002427653.1 2974779 R 243159 CDS YP_002427654.1 218666380 7134332 complement(2975745..2976020) 1 NC_011761.1 identified by match to protein family HMM PF00633; competence protein ComEA 2976020 7134332 AFE_3301 Acidithiobacillus ferrooxidans ATCC 23270 competence protein ComEA YP_002427654.1 2975745 R 243159 CDS YP_002427655.1 218667369 7136520 complement(2976115..2976510) 1 NC_011761.1 identified by match to protein family HMM PF01230; HIT family protein 2976510 7136520 AFE_3302 Acidithiobacillus ferrooxidans ATCC 23270 HIT family protein YP_002427655.1 2976115 R 243159 CDS YP_002427656.1 218666686 7136891 complement(2976507..2977799) 1 NC_011761.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 2977799 hemL 7136891 hemL Acidithiobacillus ferrooxidans ATCC 23270 glutamate-1-semialdehyde aminotransferase YP_002427656.1 2976507 R 243159 CDS YP_002427657.1 218667114 7134557 complement(2977802..2978455) 1 NC_011761.1 identified by similarity to SP:P39594; match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate pyrophosphorylase 2978455 thiE 7134557 thiE Acidithiobacillus ferrooxidans ATCC 23270 thiamine-phosphate pyrophosphorylase YP_002427657.1 2977802 R 243159 CDS YP_002427658.1 218667212 7136714 complement(2978442..2979275) 1 NC_011761.1 identified by match to protein family HMM PF08543; phosphomethylpyrimidine kinase 2979275 7136714 AFE_3305 Acidithiobacillus ferrooxidans ATCC 23270 phosphomethylpyrimidine kinase YP_002427658.1 2978442 R 243159 CDS YP_002427659.1 218666359 7135606 complement(2979330..2979452) 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2979452 7135606 AFE_3306 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427659.1 2979330 R 243159 CDS YP_002427660.1 218666835 7136499 complement(2979571..2980356) 1 NC_011761.1 identified by similarity to GB:CAE31946.1; match to protein family HMM PF00106; match to protein family HMM PF08659; short chain dehydrogenase 2980356 7136499 AFE_3307 Acidithiobacillus ferrooxidans ATCC 23270 short chain dehydrogenase YP_002427660.1 2979571 R 243159 CDS YP_002427661.1 218665920 7137084 2980590..2980829 1 NC_011761.1 identified by glimmer; putative; hypothetical protein 2980829 7137084 AFE_3308 Acidithiobacillus ferrooxidans ATCC 23270 hypothetical protein YP_002427661.1 2980590 D 243159 CDS YP_002427662.1 218665582 7134130 2980841..2982199 1 NC_011761.1 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 2982199 dnaA 7134130 dnaA Acidithiobacillus ferrooxidans ATCC 23270 chromosomal replication initiator protein DnaA YP_002427662.1 2980841 D 243159 CDS