-- dump date 20240506_033823 -- class Genbank::Contig -- table contig_comment -- id comment NZ_AP018795.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to AP018795.1.REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka).REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283xREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSIIREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76 Pseudo Genes (incomplete) :: 48 of 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76 Pseudo Genes (incomplete) :: 48 of 76 Pseudo Genes (internal stop) :: 4 of 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76 Pseudo Genes (incomplete) :: 48 of 76 Pseudo Genes (internal stop) :: 4 of 76 Pseudo Genes (multiple problems) :: 10 of 76REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76 Pseudo Genes (incomplete) :: 48 of 76 Pseudo Genes (internal stop) :: 4 of 76 Pseudo Genes (multiple problems) :: 10 of 76 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to AP018795.1. The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ Annotated by prokka 1.12-beta (https://github.com/tseemann/prokka). ##Genome-Assembly-Data-START## Assembly Method :: HGAP v. 3 Genome Coverage :: 283x Sequencing Technology :: PacBio RSII ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Date :: 02/08/2024 02:01:56 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.6 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 3,034 CDSs (total) :: 2,978 Genes (coding) :: 2,902 CDSs (with protein) :: 2,902 Genes (RNA) :: 56 rRNAs :: 2, 2, 2 (5S, 16S, 23S) complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) tRNAs :: 46 ncRNAs :: 4 Pseudo Genes (total) :: 76 CDSs (without protein) :: 76 Pseudo Genes (ambiguous residues) :: 0 of 76 Pseudo Genes (frameshifted) :: 34 of 76 Pseudo Genes (incomplete) :: 48 of 76 Pseudo Genes (internal stop) :: 4 of 76 Pseudo Genes (multiple problems) :: 10 of 76 ##Genome-Annotation-Data-END## COMPLETENESS: full length.