-- dump date 20140618_184441 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003397726.1 284047387 8738605 34..1194 1 NC_013740.1 KEGG: aac:Aaci_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 1194 8738605 Acfer_0001 Acidaminococcus fermentans DSM 20731 chromosomal replication initiator protein DnaA YP_003397726.1 34 D 591001 CDS YP_003397727.1 284047388 8736432 1916..2539 1 NC_013740.1 KEGG: CG3493 gene product from transcript CG3493-RA; hypothetical protein 2539 8736432 Acfer_0002 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397727.1 1916 D 591001 CDS YP_003397728.1 284047389 8736433 2751..4139 1 NC_013740.1 KEGG: cno:NT01CX_0867 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 4139 8736433 Acfer_0003 Acidaminococcus fermentans DSM 20731 chromosomal replication initiator protein DnaA YP_003397728.1 2751 D 591001 CDS YP_003397729.1 284047390 8736434 4387..5514 1 NC_013740.1 KEGG: tte:TTE0002 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain; DNA polymerase III subunit beta 5514 8736434 Acfer_0004 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunit beta YP_003397729.1 4387 D 591001 CDS YP_003397730.1 284047391 8736435 5514..6650 1 NC_013740.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bbe:BBR47_00040 DNA replication and repair protein F; DNA replication and repair protein RecF 6650 8736435 Acfer_0005 Acidaminococcus fermentans DSM 20731 DNA replication and repair protein RecF YP_003397730.1 5514 D 591001 CDS YP_003397731.1 284047392 8736436 6647..7378 1 NC_013740.1 PFAM: protein of unknown function DUF721; KEGG: cef:CE0005 hypothetical protein; hypothetical protein 7378 8736436 Acfer_0006 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397731.1 6647 D 591001 CDS YP_003397732.1 284047393 8736437 7356..7583 1 NC_013740.1 KEGG: chy:CHY_2706 hypothetical protein; hypothetical protein 7583 8736437 Acfer_0007 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397732.1 7356 D 591001 CDS YP_003397733.1 284047394 8736438 7599..9539 1 NC_013740.1 KEGG: tpd:Teth39_0010 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; DNA gyrase subunit B 9539 8736438 Acfer_0008 Acidaminococcus fermentans DSM 20731 DNA gyrase subunit B YP_003397733.1 7599 D 591001 CDS YP_003397734.1 284047395 8736439 9550..10245 1 NC_013740.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: dhd:Dhaf_3841 thiamine pyrophosphokinase; thiamine pyrophosphokinase 10245 8736439 Acfer_0009 Acidaminococcus fermentans DSM 20731 thiamine pyrophosphokinase YP_003397734.1 9550 D 591001 CDS YP_003397735.1 284047396 8736440 10251..11015 1 NC_013740.1 PFAM: protein of unknown function DUF81; KEGG: bcg:BCG9842_B4966 hypothetical protein; hypothetical protein 11015 8736440 Acfer_0010 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397735.1 10251 D 591001 CDS YP_003397736.1 284047397 8736441 11055..13550 1 NC_013740.1 KEGG: chy:CHY_2704 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A; DNA gyrase subunit A 13550 8736441 Acfer_0011 Acidaminococcus fermentans DSM 20731 DNA gyrase subunit A YP_003397736.1 11055 D 591001 CDS YP_003397737.1 284047398 8736442 13834..14274 1 NC_013740.1 KEGG: bwe:BcerKBAB4_0693 hypothetical protein; hypothetical protein 14274 8736442 Acfer_0012 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397737.1 13834 D 591001 CDS YP_003397738.1 284047399 8736443 complement(14311..15189) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpu:BPUM_3485 transcriptional regulator; LysR family transcriptional regulator 15189 8736443 Acfer_0013 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397738.1 14311 R 591001 CDS YP_003397739.1 284047400 8736444 15401..17044 1 NC_013740.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: apv:Apar_1191 malate dehydrogenase (oxaloacetate-decarboxylating); Malate dehydrogenase (oxaloacetate- decarboxylating) 17044 8736444 Acfer_0014 Acidaminococcus fermentans DSM 20731 Malate dehydrogenase (oxaloacetate- decarboxylating) YP_003397739.1 15401 D 591001 CDS YP_003397740.1 284047401 8736445 17411..18589 1 NC_013740.1 PFAM: Extracellular ligand-binding receptor; KEGG: gtn:GTNG_2930 branched chain amino acid ABC transporter amino acid-binding protein; extracellular ligand-binding receptor 18589 8736445 Acfer_0015 Acidaminococcus fermentans DSM 20731 extracellular ligand-binding receptor YP_003397740.1 17411 D 591001 CDS YP_003397741.1 284047402 8736446 18661..19557 1 NC_013740.1 PFAM: inner-membrane translocator; KEGG: drm:Dred_2239 inner-membrane translocator; inner-membrane translocator 19557 8736446 Acfer_0016 Acidaminococcus fermentans DSM 20731 inner-membrane translocator YP_003397741.1 18661 D 591001 CDS YP_003397742.1 284047403 8736447 19567..20547 1 NC_013740.1 PFAM: inner-membrane translocator; KEGG: hmo:HM1_0492 branched-chain amino acid abc transporter, permease protein; inner-membrane translocator 20547 8736447 Acfer_0017 Acidaminococcus fermentans DSM 20731 inner-membrane translocator YP_003397742.1 19567 D 591001 CDS YP_003397743.1 284047404 8736448 20522..21292 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: drm:Dred_2237 ABC transporter related; ABC transporter 21292 8736448 Acfer_0018 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397743.1 20522 D 591001 CDS YP_003397744.1 284047405 8736449 21292..21996 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hmo:HM1_0494 branched-chain amino acid abc transporter, ATP-binding protein; ABC transporter 21996 8736449 Acfer_0019 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397744.1 21292 D 591001 CDS YP_003397745.1 284047406 8736450 22012..22680 1 NC_013740.1 PFAM: hypothetical protein; amino acid- binding ACT domain protein; SMART: hypothetical protein; KEGG: smu:SMU.1664c putative acetoin utilization protein, acetoin dehydrogenase; hypothetical protein 22680 8736450 Acfer_0020 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397745.1 22012 D 591001 CDS YP_003397746.1 284047407 8736451 22670..22870 1 NC_013740.1 PFAM: protein of unknown function DUF951; KEGG: cpy:Cphy_3775 hypothetical protein; hypothetical protein 22870 8736451 Acfer_0021 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397746.1 22670 D 591001 CDS YP_003397747.1 284047408 8736452 22959..23687 1 NC_013740.1 hypothetical protein 23687 8736452 Acfer_0022 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397747.1 22959 D 591001 CDS YP_003397748.1 284047409 8736453 23699..24358 1 NC_013740.1 PFAM: protein of unknown function DUF805; KEGG: ppr:PBPRA1415 hypothetical protein; hypothetical protein 24358 8736453 Acfer_0023 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397748.1 23699 D 591001 CDS YP_003397749.1 284047410 8736457 30139..30339 1 NC_013740.1 KEGG: aca:ACP_1735 hypothetical protein; hypothetical protein 30339 8736457 Acfer_0024 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397749.1 30139 D 591001 CDS YP_003397750.1 284047411 8736458 complement(30375..30941) 1 NC_013740.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: ctc:CTC01203 HAD superfamily hydrolase; metal dependent phosphohydrolase 30941 8736458 Acfer_0025 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003397750.1 30375 R 591001 CDS YP_003397751.1 284047412 8736459 complement(31157..31669) 1 NC_013740.1 PFAM: Ferritin Dps family protein; KEGG: dhd:Dhaf_2260 ferritin Dps family protein; ferritin Dps family protein 31669 8736459 Acfer_0026 Acidaminococcus fermentans DSM 20731 ferritin Dps family protein YP_003397751.1 31157 R 591001 CDS YP_003397752.1 284047413 8736460 31791..32318 1 NC_013740.1 PFAM: NUDIX hydrolase; KEGG: lrl:LC705_00607 hydrolase, NUDIX family; NUDIX hydrolase 32318 8736460 Acfer_0027 Acidaminococcus fermentans DSM 20731 NUDIX hydrolase YP_003397752.1 31791 D 591001 CDS YP_003397753.1 284047414 8736461 32507..34051 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: cdf:CD2835 putative aminobenzoyl-glutamate transport protein; AbgT transporter 34051 8736461 Acfer_0028 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003397753.1 32507 D 591001 CDS YP_003397754.1 284047415 8736463 34615..35790 1 NC_013740.1 KEGG: cdf:CD1086 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; amidohydrolase 35790 8736463 Acfer_0030 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003397754.1 34615 D 591001 CDS YP_003397755.1 284047416 8736464 35919..36713 1 NC_013740.1 KEGG: hmo:HM1_0460 glutamate racemase, putative; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 36713 8736464 Acfer_0031 Acidaminococcus fermentans DSM 20731 glutamate racemase YP_003397755.1 35919 D 591001 CDS YP_003397756.1 284047417 8736466 37000..37914 1 NC_013740.1 KEGG: Os06g0589300; hypothetical protein; hypothetical protein 37914 8736466 Acfer_0032 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397756.1 37000 D 591001 CDS YP_003397757.1 284047418 8736467 37911..39260 1 NC_013740.1 KEGG: dhd:Dhaf_2424 signal transduction histidine kinase regulating citrate/malate metabolism; hypothetical protein 39260 8736467 Acfer_0033 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397757.1 37911 D 591001 CDS YP_003397758.1 284047419 8736468 complement(39288..40016) 1 NC_013740.1 PFAM: response regulator receiver; LytTr DNA- binding region; SMART: response regulator receiver; KEGG: dhd:Dhaf_2425 two component transcriptional regulator, LytTR family; LytTR family two component transcriptional regulator 40016 8736468 Acfer_0034 Acidaminococcus fermentans DSM 20731 LytTR family two component transcriptional regulator YP_003397758.1 39288 R 591001 CDS YP_003397759.1 284047420 8736469 40565..45937 1 NC_013740.1 PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Gp5 domain protein; KEGG: sep:SE2249 streptococcal hemagglutinin protein; S-layer protein 45937 8736469 Acfer_0035 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003397759.1 40565 D 591001 CDS YP_003397760.1 284047421 8736470 complement(46039..47109) 1 NC_013740.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like; KEGG: cdf:CD1281 putative tRNA (5-methylaminomethyl- 2-thiouridylate)-methyltransferase; tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase 47109 8736470 Acfer_0036 Acidaminococcus fermentans DSM 20731 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase YP_003397760.1 46039 R 591001 CDS YP_003397761.1 284047422 8736471 complement(47121..48272) 1 NC_013740.1 PFAM: aminotransferase class V; KEGG: tpd:Teth39_0280 cysteine desulfurase; cysteine desulfurase 48272 8736471 Acfer_0037 Acidaminococcus fermentans DSM 20731 cysteine desulfurase YP_003397761.1 47121 R 591001 CDS YP_003397762.1 284047423 8736472 48517..48801 1 NC_013740.1 TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; KEGG: drm:Dred_3308 30S ribosomal protein S6; 30S ribosomal protein S6 48801 8736472 Acfer_0038 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S6 YP_003397762.1 48517 D 591001 CDS YP_003397763.1 284047424 8736473 48815..49258 1 NC_013740.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: pjd:Pjdr2_6272 single-strand binding protein; single-strand binding protein 49258 8736473 Acfer_0039 Acidaminococcus fermentans DSM 20731 single-strand binding protein YP_003397763.1 48815 D 591001 CDS YP_003397764.1 284047425 8736474 49280..49516 1 NC_013740.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: dhd:Dhaf_4934 ribosomal protein S18; 30S ribosomal protein S18 49516 8736474 Acfer_0040 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S18 YP_003397764.1 49280 D 591001 CDS YP_003397765.1 284047426 8736475 49666..50622 1 NC_013740.1 PFAM: Protein of unknown function DUF2232, membrane; KEGG: chy:CHY_0038 hypothetical protein; hypothetical protein 50622 8736475 Acfer_0041 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397765.1 49666 D 591001 CDS YP_003397766.1 284047427 8736476 50634..52682 1 NC_013740.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: GGDEF domain containing protein; KEGG: cth:Cthe_2258 phosphoesterase, RecJ-like protein; diguanylate cyclase and phosphoesterase 52682 8736476 Acfer_0042 Acidaminococcus fermentans DSM 20731 diguanylate cyclase and phosphoesterase YP_003397766.1 50634 D 591001 CDS YP_003397767.1 284047428 8736477 52642..53094 1 NC_013740.1 TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; KEGG: chy:CHY_0039 ribosomal protein L9; 50S ribosomal protein L9 53094 8736477 Acfer_0043 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L9 YP_003397767.1 52642 D 591001 CDS YP_003397768.1 284047429 8736478 53236..54567 1 NC_013740.1 KEGG: hmo:HM1_0975 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; replicative DNA helicase 54567 8736478 Acfer_0044 Acidaminococcus fermentans DSM 20731 replicative DNA helicase YP_003397768.1 53236 D 591001 CDS YP_003397769.1 284047430 8736479 54764..56056 1 NC_013740.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; KEGG: bhy:BHWA1_00426 adenylosuccinate lyase; adenylosuccinate lyase 56056 8736479 Acfer_0045 Acidaminococcus fermentans DSM 20731 adenylosuccinate lyase YP_003397769.1 54764 D 591001 CDS YP_003397770.1 284047431 8736480 56077..57366 1 NC_013740.1 KEGG: bhy:BHWA1_01817 adenylosuccinate synthase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase; adenylosuccinate synthetase 57366 8736480 Acfer_0046 Acidaminococcus fermentans DSM 20731 adenylosuccinate synthetase YP_003397770.1 56077 D 591001 CDS YP_003397771.1 284047432 8736484 complement(63155..64390) 1 NC_013740.1 TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: fnu:FN1801 sodium/glutamate symport carrier protein; sodium/glutamate symporter 64390 8736484 Acfer_0047 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003397771.1 63155 R 591001 CDS YP_003397772.1 284047433 8736485 64689..66107 1 NC_013740.1 TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain protein; KEGG: fnu:FN1450 integral membrane protein; YidE/YbjL duplication 66107 8736485 Acfer_0048 Acidaminococcus fermentans DSM 20731 YidE/YbjL duplication YP_003397772.1 64689 D 591001 CDS YP_003397773.1 284047434 8736486 complement(66408..67349) 1 NC_013740.1 PFAM: glutaminase, core; KEGG: cpr:CPR_1963 glutaminase; glutaminase 67349 8736486 Acfer_0049 Acidaminococcus fermentans DSM 20731 glutaminase YP_003397773.1 66408 R 591001 CDS YP_003397774.1 284047435 8736487 complement(67368..68774) 1 NC_013740.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: apr:Apre_0099 amino acid carrier protein; amino acid carrier protein 68774 8736487 Acfer_0050 Acidaminococcus fermentans DSM 20731 amino acid carrier protein YP_003397774.1 67368 R 591001 CDS YP_003397775.1 284047436 8736488 complement(68875..69828) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: ere:EUBREC_1085 hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator 69828 8736488 Acfer_0051 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397775.1 68875 R 591001 CDS YP_003397776.1 284047437 8736489 69988..70611 1 NC_013740.1 PFAM: formate/nitrite transporter; KEGG: fma:FMG_0291 putative formate/nitrite transporter; formate/nitrite transporter 70611 8736489 Acfer_0052 Acidaminococcus fermentans DSM 20731 formate/nitrite transporter YP_003397776.1 69988 D 591001 CDS YP_003397777.1 284047438 8736490 70686..71858 1 NC_013740.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dhd:Dhaf_3921 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 71858 8736490 Acfer_0053 Acidaminococcus fermentans DSM 20731 iron-containing alcohol dehydrogenase YP_003397777.1 70686 D 591001 CDS YP_003397778.1 284047439 8736491 71971..72837 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: shi:Shel_23190 predicted permease; hypothetical protein 72837 8736491 Acfer_0054 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397778.1 71971 D 591001 CDS YP_003397779.1 284047440 8736492 72970..73236 1 NC_013740.1 PFAM: protein of unknown function DUF1653; KEGG: ere:EUBREC_0984 hypothetical protein; hypothetical protein 73236 8736492 Acfer_0055 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397779.1 72970 D 591001 CDS YP_003397780.1 284047441 8736493 73361..73903 1 NC_013740.1 PFAM: BioY protein; KEGG: dae:Dtox_4332 BioY protein; BioY protein 73903 8736493 Acfer_0056 Acidaminococcus fermentans DSM 20731 BioY protein YP_003397780.1 73361 D 591001 CDS YP_003397781.1 284047442 8736494 74091..74777 1 NC_013740.1 TIGRFAM: dethiobiotin synthase; KEGG: bhy:BHWA1_02061 dethiobiotin synthetase; dethiobiotin synthase 74777 8736494 Acfer_0057 Acidaminococcus fermentans DSM 20731 dethiobiotin synthase YP_003397781.1 74091 D 591001 CDS YP_003397782.1 284047443 8736495 74788..76125 1 NC_013740.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: amu:Amuc_0493 adenosylmethionine-8-amino-7- oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 76125 8736495 Acfer_0058 Acidaminococcus fermentans DSM 20731 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_003397782.1 74788 D 591001 CDS YP_003397783.1 284047444 8736496 76347..77582 1 NC_013740.1 PFAM: peptidase M24; KEGG: cth:Cthe_0541 peptidase M24; peptidase M24 77582 8736496 Acfer_0059 Acidaminococcus fermentans DSM 20731 peptidase M24 YP_003397783.1 76347 D 591001 CDS YP_003397784.1 284047445 8736497 77678..77986 1 NC_013740.1 hypothetical protein 77986 8736497 Acfer_0060 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397784.1 77678 D 591001 CDS YP_003397785.1 284047446 8736498 77983..78564 1 NC_013740.1 PFAM: protein of unknown function DUF204; KEGG: dhd:Dhaf_2300 protein of unknown function DUF204; hypothetical protein 78564 8736498 Acfer_0061 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397785.1 77983 D 591001 CDS YP_003397786.1 284047447 8736499 78617..79765 1 NC_013740.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: dds:Ddes_2317 DNA-directed DNA polymerase; DNA-directed DNA polymerase 79765 8736499 Acfer_0062 Acidaminococcus fermentans DSM 20731 DNA-directed DNA polymerase YP_003397786.1 78617 D 591001 CDS YP_003397787.1 284047448 8736500 79835..80713 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bay:RBAM_037640 hypothetical protein; hypothetical protein 80713 8736500 Acfer_0063 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397787.1 79835 D 591001 CDS YP_003397788.1 284047449 8736501 80827..82122 1 NC_013740.1 KEGG: cbe:Cbei_0766 O-acetylhomoserine/O- acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; O-acetylhomoserine/O-acetylserine sulfhydrylase 82122 8736501 Acfer_0064 Acidaminococcus fermentans DSM 20731 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_003397788.1 80827 D 591001 CDS YP_003397789.1 284047450 8736502 82278..83621 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpy:Cphy_3173 MATE efflux family protein; MATE efflux family protein 83621 8736502 Acfer_0065 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003397789.1 82278 D 591001 CDS YP_003397790.1 284047451 8736503 complement(83720..84820) 1 NC_013740.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: sth:STH1689 peptidase; peptidase T-like protein 84820 8736503 Acfer_0066 Acidaminococcus fermentans DSM 20731 peptidase T-like protein YP_003397790.1 83720 R 591001 CDS YP_003397791.1 284047452 8736504 complement(84845..86032) 1 NC_013740.1 KEGG: cdf:CD0651 hypothetical protein; hypothetical protein 86032 8736504 Acfer_0067 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397791.1 84845 R 591001 CDS YP_003397792.1 284047453 8736505 86269..87237 1 NC_013740.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ere:EUBREC_1207 phosphoglycerate dehydrogenase, putative; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 87237 8736505 Acfer_0068 Acidaminococcus fermentans DSM 20731 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003397792.1 86269 D 591001 CDS YP_003397793.1 284047454 8736506 87337..88902 1 NC_013740.1 KEGG: see:SNSL254_A4535 hypothetical protein; hypothetical protein 88902 8736506 Acfer_0069 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397793.1 87337 D 591001 CDS YP_003397794.1 284047455 8736507 complement(89125..90063) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: dsa:Desal_0550 LysR family transcriptional regulator; LysR family transcriptional regulator 90063 8736507 Acfer_0070 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397794.1 89125 R 591001 CDS YP_003397795.1 284047456 8736508 90278..91606 1 NC_013740.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dda:Dd703_0843 glucarate dehydratase; glucarate dehydratase 91606 8736508 Acfer_0071 Acidaminococcus fermentans DSM 20731 glucarate dehydratase YP_003397795.1 90278 D 591001 CDS YP_003397796.1 284047457 8736509 91638..93050 1 NC_013740.1 PFAM: gluconate transporter; KEGG: msu:MS0688 GntT protein; gluconate transporter 93050 8736509 Acfer_0072 Acidaminococcus fermentans DSM 20731 gluconate transporter YP_003397796.1 91638 D 591001 CDS YP_003397797.1 284047458 8736510 93181..94140 1 NC_013740.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: oih:OB2844 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 94140 8736510 Acfer_0073 Acidaminococcus fermentans DSM 20731 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003397797.1 93181 D 591001 CDS YP_003397798.1 284047459 8736511 94188..94385 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dps:DP2322 2-ketoglutarate oxidoreductase subunit delta; 4Fe-4S ferredoxin 94385 8736511 Acfer_0074 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003397798.1 94188 D 591001 CDS YP_003397799.1 284047460 8736512 94385..95530 1 NC_013740.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: nth:Nther_1482 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein 95530 8736512 Acfer_0075 Acidaminococcus fermentans DSM 20731 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_003397799.1 94385 D 591001 CDS YP_003397800.1 284047461 8736513 95530..96345 1 NC_013740.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tte:TTE1341 2-oxoglutarate ferredoxin oxidoreductase subunit beta; thiamine pyrophosphate domain-containing TPP-binding protein 96345 8736513 Acfer_0076 Acidaminococcus fermentans DSM 20731 thiamine pyrophosphate domain-containing TPP-binding protein YP_003397800.1 95530 D 591001 CDS YP_003397801.1 284047462 8736514 96348..96878 1 NC_013740.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: mka:MK0730 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; pyruvate/ketoisovalerate oxidoreductase 96878 8736514 Acfer_0077 Acidaminococcus fermentans DSM 20731 pyruvate/ketoisovalerate oxidoreductase YP_003397801.1 96348 D 591001 CDS YP_003397802.1 284047463 8736515 96914..98599 1 NC_013740.1 KEGG: hor:Hore_10820 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 98599 8736515 Acfer_0078 Acidaminococcus fermentans DSM 20731 dihydroxy-acid dehydratase YP_003397802.1 96914 D 591001 CDS YP_003397803.1 284047464 8736516 98658..99011 1 NC_013740.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cce:Ccel_1672 2-dehydro-3- deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; Glyoxalase/bleomycin resistance protein/dioxygenase 99011 8736516 Acfer_0079 Acidaminococcus fermentans DSM 20731 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003397803.1 98658 D 591001 CDS YP_003397804.1 284047465 8736517 99170..100489 1 NC_013740.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: ere:EUBREC_3075 4-hydroxybutyrate coenzyme A transferase; acetyl-CoA hydrolase/transferase 100489 8736517 Acfer_0080 Acidaminococcus fermentans DSM 20731 acetyl-CoA hydrolase/transferase YP_003397804.1 99170 D 591001 CDS YP_003397805.1 284047466 8736518 100901..102214 1 NC_013740.1 KEGG: pjd:Pjdr2_1789 hypothetical protein; hypothetical protein 102214 8736518 Acfer_0081 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397805.1 100901 D 591001 CDS YP_003397806.1 284047467 8736519 102232..103752 1 NC_013740.1 KEGG: bsu:BSU02510 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase 103752 8736519 Acfer_0082 Acidaminococcus fermentans DSM 20731 galactarate dehydratase YP_003397806.1 102232 D 591001 CDS YP_003397807.1 284047468 8736520 103871..105160 1 NC_013740.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: fnu:FN0978 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC-like protein 105160 8736520 Acfer_0083 Acidaminococcus fermentans DSM 20731 Na+/H+ antiporter NhaC-like protein YP_003397807.1 103871 D 591001 CDS YP_003397808.1 284047469 8736521 complement(105455..105898) 1 NC_013740.1 PFAM: ferric-uptake regulator; KEGG: cth:Cthe_0546 ferric uptake regulator family protein; ferric uptake regulator, Fur family 105898 8736521 Acfer_0084 Acidaminococcus fermentans DSM 20731 ferric uptake regulator, Fur family YP_003397808.1 105455 R 591001 CDS YP_003397809.1 284047470 8736522 complement(105891..106703) 1 NC_013740.1 PFAM: ABC-3 protein; KEGG: cbl:CLK_0805 manganese/zinc/iron chelate ABC transporter permease; ABC-3 protein 106703 8736522 Acfer_0085 Acidaminococcus fermentans DSM 20731 ABC-3 protein YP_003397809.1 105891 R 591001 CDS YP_003397810.1 284047471 8736523 complement(106696..107370) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbf:CLI_1460 manganese/zinc/iron chelate ABC transporter ATP-binding protein; ABC transporter 107370 8736523 Acfer_0086 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397810.1 106696 R 591001 CDS YP_003397811.1 284047472 8736524 107705..108607 1 NC_013740.1 PFAM: periplasmic solute binding protein; KEGG: ckr:CKR_2696 hypothetical protein; periplasmic solute binding protein 108607 8736524 Acfer_0087 Acidaminococcus fermentans DSM 20731 periplasmic solute binding protein YP_003397811.1 107705 D 591001 CDS YP_003397812.1 284047473 8736525 108990..109481 1 NC_013740.1 hypothetical protein 109481 8736525 Acfer_0088 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397812.1 108990 D 591001 CDS YP_003397813.1 284047474 8736526 109543..110259 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cag:Cagg_2709 two component transcriptional regulator, winged helix family; two component transcriptional regulator, winged helix family 110259 8736526 Acfer_0089 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003397813.1 109543 D 591001 CDS YP_003397814.1 284047475 8736527 110263..111429 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: chy:CHY_2566 sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 111429 8736527 Acfer_0090 Acidaminococcus fermentans DSM 20731 integral membrane sensor signal transduction histidine kinase YP_003397814.1 110263 D 591001 CDS YP_003397815.1 284047476 8736528 111770..112273 1 NC_013740.1 KEGG: ccv:CCV52592_0992 hypothetical protein; hypothetical protein 112273 8736528 Acfer_0091 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397815.1 111770 D 591001 CDS YP_003397816.1 284047477 8736529 complement(112316..113140) 1 NC_013740.1 PFAM: ThiJ/PfpI domain protein; KEGG: pen:PSEEN2360 hypothetical protein; ThiJ/PfpI domain-containing protein 113140 8736529 Acfer_0092 Acidaminococcus fermentans DSM 20731 ThiJ/PfpI domain-containing protein YP_003397816.1 112316 R 591001 CDS YP_003397817.1 284047478 8736530 complement(113262..113585) 1 NC_013740.1 PFAM: helix-turn-helix HxlR type; KEGG: cac:CAC1483 transcriptional regulator; HxlR family transcriptional regulator 113585 8736530 Acfer_0093 Acidaminococcus fermentans DSM 20731 HxlR family transcriptional regulator YP_003397817.1 113262 R 591001 CDS YP_003397818.1 284047479 8736531 113718..114284 1 NC_013740.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: bfs:BF2126 putative flavoredoxin; flavin reductase domain-containing FMN-binding protein 114284 8736531 Acfer_0094 Acidaminococcus fermentans DSM 20731 flavin reductase domain-containing FMN-binding protein YP_003397818.1 113718 D 591001 CDS YP_003397819.1 284047480 8736532 complement(114393..115250) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbe:BBR47_11810 transcriptional regulator; LysR family transcriptional regulator 115250 8736532 Acfer_0095 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397819.1 114393 R 591001 CDS YP_003397820.1 284047481 8736533 115609..117897 1 NC_013740.1 PFAM: aconitate hydratase domain protein; KEGG: hor:Hore_21050 aconitate hydratase; aconitate hydratase 117897 8736533 Acfer_0096 Acidaminococcus fermentans DSM 20731 aconitate hydratase YP_003397820.1 115609 D 591001 CDS YP_003397821.1 284047482 8736534 117980..119302 1 NC_013740.1 PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter; citrate transporter 119302 8736534 Acfer_0097 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003397821.1 117980 D 591001 CDS YP_003397822.1 284047483 8736535 119931..120605 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcg:BCG9842_B2033 DNA-binding response regulator; two component transcriptional regulator, winged helix family 120605 8736535 Acfer_0098 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003397822.1 119931 D 591001 CDS YP_003397823.1 284047484 8736536 120589..122016 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cco:CCC13826_1970 hypothetical protein; integral membrane sensor signal transduction histidine kinase 122016 8736536 Acfer_0099 Acidaminococcus fermentans DSM 20731 integral membrane sensor signal transduction histidine kinase YP_003397823.1 120589 D 591001 CDS YP_003397824.1 284047485 8736537 122143..122841 1 NC_013740.1 KEGG: hypothetical protein; hypothetical protein 122841 8736537 Acfer_0100 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397824.1 122143 D 591001 CDS YP_003397825.1 284047486 8736538 122856..123179 1 NC_013740.1 KEGG: axoneme-associated protein mst101(1); hypothetical protein 123179 8736538 Acfer_0101 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397825.1 122856 D 591001 CDS YP_003397826.1 284047487 8736539 complement(123221..124063) 1 NC_013740.1 PFAM: Radical SAM domain protein; KEGG: ele:Elen_1694 radical SAM domain protein; radical SAM protein 124063 8736539 Acfer_0102 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003397826.1 123221 R 591001 CDS YP_003397827.1 284047488 8736540 complement(124060..125457) 1 NC_013740.1 PFAM: AMMECR1 domain protein; Extradiol ring- cleavage dioxygenase class III protein subunit B; KEGG: shi:Shel_17380 hypothetical protein; AMMECR1 domain-containing protein 125457 8736540 Acfer_0103 Acidaminococcus fermentans DSM 20731 AMMECR1 domain-containing protein YP_003397827.1 124060 R 591001 CDS YP_003397828.1 284047489 8736541 complement(125520..126167) 1 NC_013740.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: dge:Dgeo_1556 phage SPO1 DNA polymerase- related protein; phage SPO1 DNA polymerase-related protein 126167 8736541 Acfer_0104 Acidaminococcus fermentans DSM 20731 phage SPO1 DNA polymerase-related protein YP_003397828.1 125520 R 591001 CDS YP_003397829.1 284047490 8736542 complement(126437..126961) 1 NC_013740.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: acl:ACL_0056 integral membrane protein; heptaprenyl diphosphate synthase component I 126961 8736542 Acfer_0105 Acidaminococcus fermentans DSM 20731 heptaprenyl diphosphate synthase component I YP_003397829.1 126437 R 591001 CDS YP_003397830.1 284047491 8736543 complement(126945..127322) 1 NC_013740.1 PFAM: protein of unknown function DUF1312; KEGG: tte:TTE2485 hypothetical protein; hypothetical protein 127322 8736543 Acfer_0106 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397830.1 126945 R 591001 CDS YP_003397831.1 284047492 8736544 complement(127332..128333) 1 NC_013740.1 PFAM: ApbE family lipoprotein; KEGG: swo:Swol_1956 thiamine biosynthesis lipoprotein; ApbE family lipoprotein 128333 8736544 Acfer_0107 Acidaminococcus fermentans DSM 20731 ApbE family lipoprotein YP_003397831.1 127332 R 591001 CDS YP_003397832.1 284047493 8736545 complement(128346..129263) 1 NC_013740.1 PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bvu:BVU_3890 ferredoxin; Fe-S cluster domain-containing protein 129263 8736545 Acfer_0108 Acidaminococcus fermentans DSM 20731 Fe-S cluster domain-containing protein YP_003397832.1 128346 R 591001 CDS YP_003397833.1 284047494 8736546 complement(129281..129856) 1 NC_013740.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: tpd:Teth39_2120 electron transport complex, RnfABCDGE type, A subunit; RnfABCDGE type electron transport complex subunit A 129856 8736546 Acfer_0109 Acidaminococcus fermentans DSM 20731 RnfABCDGE type electron transport complex subunit A YP_003397833.1 129281 R 591001 CDS YP_003397834.1 284047495 8736547 complement(129849..130445) 1 NC_013740.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cpf:CPF_1319 electron transport complex RsxE subunit; RnfABCDGE type electron transport complex subunit E 130445 8736547 Acfer_0110 Acidaminococcus fermentans DSM 20731 RnfABCDGE type electron transport complex subunit E YP_003397834.1 129849 R 591001 CDS YP_003397835.1 284047496 8736548 complement(130451..131020) 1 NC_013740.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: cbl:CLK_3558 electron transport complex, RnfABCDGE type, G subunit; RnfABCDGE type electron transport complex subunit G 131020 8736548 Acfer_0111 Acidaminococcus fermentans DSM 20731 RnfABCDGE type electron transport complex subunit G YP_003397835.1 130451 R 591001 CDS YP_003397836.1 284047497 8736549 complement(131017..132051) 1 NC_013740.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: ckr:CKR_1161 hypothetical protein; RnfABCDGE type electron transport complex subunit D 132051 8736549 Acfer_0112 Acidaminococcus fermentans DSM 20731 RnfABCDGE type electron transport complex subunit D YP_003397836.1 131017 R 591001 CDS YP_003397837.1 284047498 8736550 complement(132078..133445) 1 NC_013740.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; KEGG: tex:Teth514_0079 electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 133445 8736550 Acfer_0113 Acidaminococcus fermentans DSM 20731 RnfABCDGE type electron transport complex subunit C YP_003397837.1 132078 R 591001 CDS YP_003397838.1 284047499 8736551 133745..134653 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dae:Dtox_3790 radical SAM domain protein; radical SAM protein 134653 8736551 Acfer_0114 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003397838.1 133745 D 591001 CDS YP_003397839.1 284047500 8736552 134873..135571 1 NC_013740.1 PFAM: NLP/P60 protein; Peptidoglycan-binding domain 1 protein; KEGG: cce:Ccel_2940 NLP/P60 protein; NLP/P60 protein 135571 8736552 Acfer_0115 Acidaminococcus fermentans DSM 20731 NLP/P60 protein YP_003397839.1 134873 D 591001 CDS YP_003397840.1 284047501 8736553 135593..137512 1 NC_013740.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: cba:CLB_1645 aco operon transcriptional regulator; Fis family sigma-54 specific transcriptional regulator 137512 8736553 Acfer_0116 Acidaminococcus fermentans DSM 20731 Fis family sigma-54 specific transcriptional regulator YP_003397840.1 135593 D 591001 CDS YP_003397841.1 284047502 8736554 137603..138244 1 NC_013740.1 KEGG: bpu:BPUM_2637 tRNA (guanine-N(7)-)- methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 138244 8736554 Acfer_0117 Acidaminococcus fermentans DSM 20731 tRNA (guanine-N(7)-)-methyltransferase YP_003397841.1 137603 D 591001 CDS YP_003397842.1 284047503 8736555 138263..139468 1 NC_013740.1 PFAM: cell cycle protein; KEGG: mta:Moth_0842 cell cycle protein; cell cycle protein 139468 8736555 Acfer_0118 Acidaminococcus fermentans DSM 20731 cell cycle protein YP_003397842.1 138263 D 591001 CDS YP_003397843.1 284047504 8736556 139465..141558 1 NC_013740.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: chy:CHY_2075 penicillin-binding protein 2B; peptidoglycan glycosyltransferase 141558 8736556 Acfer_0119 Acidaminococcus fermentans DSM 20731 peptidoglycan glycosyltransferase YP_003397843.1 139465 D 591001 CDS YP_003397844.1 284047505 8736557 141574..142392 1 NC_013740.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; KEGG: lsl:LSL_0533 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase; Methylenetetrahydrofolate dehydrogenase (NADP(+)) 142392 8736557 Acfer_0120 Acidaminococcus fermentans DSM 20731 Methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_003397844.1 141574 D 591001 CDS YP_003397845.1 284047506 8736558 complement(142393..142788) 1 NC_013740.1 KEGG: cce:Ccel_0086 hypothetical protein; hypothetical protein 142788 8736558 Acfer_0121 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397845.1 142393 R 591001 CDS YP_003397846.1 284047507 8736559 142927..143685 1 NC_013740.1 KEGG: gwc:GWCH70_1791 hypothetical protein; hypothetical protein 143685 8736559 Acfer_0122 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397846.1 142927 D 591001 CDS YP_003397847.1 284047508 8736560 143932..144327 1 NC_013740.1 PFAM: protein of unknown function DUF190; KEGG: dsa:Desal_1826 protein of unknown function DUF190; hypothetical protein 144327 8736560 Acfer_0123 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397847.1 143932 D 591001 CDS YP_003397848.1 284047509 8736561 144427..144903 1 NC_013740.1 PFAM: LuxS protein; KEGG: bln:Blon_2000 S-ribosylhomocysteinase; quorum-sensing autoinducer 2 (AI-2), LuxS 144903 8736561 Acfer_0124 Acidaminococcus fermentans DSM 20731 quorum-sensing autoinducer 2 (AI-2), LuxS YP_003397848.1 144427 D 591001 CDS YP_003397849.1 284047510 8736562 complement(144957..146687) 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: lbu:LBUL_0873 signal transduction histidine kinase; histidine kinase 146687 8736562 Acfer_0125 Acidaminococcus fermentans DSM 20731 histidine kinase YP_003397849.1 144957 R 591001 CDS YP_003397850.1 284047511 8736563 complement(146703..147380) 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cth:Cthe_1600 two component transcriptional regulator; two component transcriptional regulator, winged helix family 147380 8736563 Acfer_0126 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003397850.1 146703 R 591001 CDS YP_003397851.1 284047512 8736564 147575..147883 1 NC_013740.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: bcv:Bcav_2432 peptidoglycan-binding LysM; peptidoglycan-binding lysin domain-containing protein 147883 8736564 Acfer_0127 Acidaminococcus fermentans DSM 20731 peptidoglycan-binding lysin domain-containing protein YP_003397851.1 147575 D 591001 CDS YP_003397852.1 284047513 8736566 149365..150612 1 NC_013740.1 KEGG: dma:DMR_40670 hypothetical protein; hypothetical protein 150612 8736566 Acfer_0129 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397852.1 149365 D 591001 CDS YP_003397853.1 284047514 8736567 150817..152256 1 NC_013740.1 PFAM: carbon starvation protein CstA; KEGG: tde:TDE0012 carbon starvation protein CstA, putative; carbon starvation protein CstA 152256 8736567 Acfer_0130 Acidaminococcus fermentans DSM 20731 carbon starvation protein CstA YP_003397853.1 150817 D 591001 CDS YP_003397854.1 284047515 8736568 152621..154048 1 NC_013740.1 PFAM: FAD linked oxidase domain protein; KEGG: amt:Amet_3747 FAD linked oxidase domain- containing protein; FAD linked oxidase domain-containing protein 154048 8736568 Acfer_0131 Acidaminococcus fermentans DSM 20731 FAD linked oxidase domain-containing protein YP_003397854.1 152621 D 591001 CDS YP_003397855.1 284047516 8736569 154166..155446 1 NC_013740.1 hypothetical protein 155446 8736569 Acfer_0132 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397855.1 154166 D 591001 CDS YP_003397856.1 284047517 8736570 155474..156247 1 NC_013740.1 PFAM: Silent information regulator protein Sir2; KEGG: lsl:LSL_0203 NAD-dependent deacetylase; silent information regulator protein Sir2 156247 8736570 Acfer_0133 Acidaminococcus fermentans DSM 20731 silent information regulator protein Sir2 YP_003397856.1 155474 D 591001 CDS YP_003397857.1 284047518 8736571 156327..157607 1 NC_013740.1 KEGG: chy:CHY_2697 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like; seryl-tRNA synthetase 157607 8736571 Acfer_0134 Acidaminococcus fermentans DSM 20731 seryl-tRNA synthetase YP_003397857.1 156327 D 591001 CDS YP_003397858.1 284047519 8736572 157950..159119 1 NC_013740.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rba:RB8469 lysine/ornithine decarboxylase; lysine decarboxylase 159119 8736572 Acfer_0135 Acidaminococcus fermentans DSM 20731 lysine decarboxylase YP_003397858.1 157950 D 591001 CDS YP_003397859.1 284047520 8736573 complement(159167..160300) 1 NC_013740.1 KEGG: cbl:CLK_2222 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 160300 8736573 Acfer_0136 Acidaminococcus fermentans DSM 20731 N-acetylglucosamine-6-phosphate deacetylase YP_003397859.1 159167 R 591001 CDS YP_003397860.1 284047521 8736574 160398..161234 1 NC_013740.1 TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); KEGG: cbe:Cbei_1917 N-acetylmuramic acid-6- phosphate etherase; RpiR family transcriptional regulator 161234 8736574 Acfer_0137 Acidaminococcus fermentans DSM 20731 RpiR family transcriptional regulator YP_003397860.1 160398 D 591001 CDS YP_003397861.1 284047522 8736575 161224..162627 1 NC_013740.1 PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: cbb:CLD_3191 PTS system, IIBC components; PTS system transporter subunit IIC 162627 8736575 Acfer_0138 Acidaminococcus fermentans DSM 20731 PTS system transporter subunit IIC YP_003397861.1 161224 D 591001 CDS YP_003397862.1 284047523 8736576 162624..163694 1 NC_013740.1 PFAM: protein of unknown function DUF871; KEGG: cbe:Cbei_1919 hypothetical protein; hypothetical protein 163694 8736576 Acfer_0139 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397862.1 162624 D 591001 CDS YP_003397863.1 284047524 8736577 163733..164842 1 NC_013740.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: dhd:Dhaf_4937 GTP-binding protein YchF; GTP-binding protein YchF 164842 8736577 Acfer_0140 Acidaminococcus fermentans DSM 20731 GTP-binding protein YchF YP_003397863.1 163733 D 591001 CDS YP_003397864.1 284047525 8736578 164877..165650 1 NC_013740.1 KEGG: ctc:CTC01046 histidinol-phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; HisJ family histidinol phosphate phosphatase 165650 8736578 Acfer_0141 Acidaminococcus fermentans DSM 20731 HisJ family histidinol phosphate phosphatase YP_003397864.1 164877 D 591001 CDS YP_003397865.1 284047526 8736579 165816..166427 1 NC_013740.1 KEGG: rha:RHA1_ro01297 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 166427 8736579 Acfer_0142 Acidaminococcus fermentans DSM 20731 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_003397865.1 165816 D 591001 CDS YP_003397866.1 284047527 8736580 166463..167050 1 NC_013740.1 KEGG: cno:NT01CX_0074 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 167050 8736580 Acfer_0143 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003397866.1 166463 D 591001 CDS YP_003397867.1 284047528 8736581 167054..168031 1 NC_013740.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: chy:CHY_2591 putative transcriptional regulator; cell envelope-related transcriptional attenuator 168031 8736581 Acfer_0144 Acidaminococcus fermentans DSM 20731 cell envelope-related transcriptional attenuator YP_003397867.1 167054 D 591001 CDS YP_003397868.1 284047529 8736582 168093..168446 1 NC_013740.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cce:Ccel_1366 iojap-like protein; iojap family protein 168446 8736582 Acfer_0145 Acidaminococcus fermentans DSM 20731 iojap family protein YP_003397868.1 168093 D 591001 CDS YP_003397869.1 284047530 8736583 168443..169336 1 NC_013740.1 KEGG: cno:NT01CX_0180 S1 RNA-binding domain- containing protein; S1 RNA-binding domain-containing protein 169336 8736583 Acfer_0146 Acidaminococcus fermentans DSM 20731 S1 RNA-binding domain-containing protein YP_003397869.1 168443 D 591001 CDS YP_003397870.1 284047531 8736585 complement(169896..170894) 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 170894 8736585 Acfer_0147 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003397870.1 169896 R 591001 CDS YP_003397871.1 284047532 8736586 complement(170906..171310) 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 171310 8736586 Acfer_0148 Acidaminococcus fermentans DSM 20731 putative transposase YP_003397871.1 170906 R 591001 CDS YP_003397872.1 284047533 8736587 complement(171676..172746) 1 NC_013740.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: gka:GK1526 hypothetical protein; membrane protein AbrB 172746 8736587 Acfer_0149 Acidaminococcus fermentans DSM 20731 membrane protein AbrB YP_003397872.1 171676 R 591001 CDS YP_003397873.1 284047534 8736588 172887..173816 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator; LysR family transcriptional regulator 173816 8736588 Acfer_0150 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397873.1 172887 D 591001 CDS YP_003397874.1 284047535 8736589 173841..175247 1 NC_013740.1 PFAM: KWG Leptospira repeat protein; KEGG: ate:Athe_0718 KWG Leptospira repeat protein; KWG repeat-containing protein 175247 8736589 Acfer_0151 Acidaminococcus fermentans DSM 20731 KWG repeat-containing protein YP_003397874.1 173841 D 591001 CDS YP_003397875.1 284047536 8736590 175571..176836 1 NC_013740.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain protein; KEGG: ckl:CKL_2159 3-isopropylmalate dehydratase large subunit; 3-isopropylmalate dehydratase large subunit 176836 8736590 Acfer_0152 Acidaminococcus fermentans DSM 20731 3-isopropylmalate dehydratase large subunit YP_003397875.1 175571 D 591001 CDS YP_003397876.1 284047537 8736591 176833..177315 1 NC_013740.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: pab:PAB0892 3-isopropylmalate dehydratase small subunit; 3-isopropylmalate dehydratase small subunit 177315 8736591 Acfer_0153 Acidaminococcus fermentans DSM 20731 3-isopropylmalate dehydratase small subunit YP_003397876.1 176833 D 591001 CDS YP_003397877.1 284047538 8736592 177315..178388 1 NC_013740.1 KEGG: aae:aq_244 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 178388 8736592 Acfer_0154 Acidaminococcus fermentans DSM 20731 3-isopropylmalate dehydrogenase YP_003397877.1 177315 D 591001 CDS YP_003397878.1 284047539 8736593 178476..179045 1 NC_013740.1 PFAM: methyladenine glycosylase; KEGG: blj:BLD_0730 3-methyladenine DNA glycosylase; DNA-3-methyladenine glycosylase I 179045 8736593 Acfer_0155 Acidaminococcus fermentans DSM 20731 DNA-3-methyladenine glycosylase I YP_003397878.1 178476 D 591001 CDS YP_003397879.1 284047540 8736594 complement(179327..179830) 1 NC_013740.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; KEGG: dhd:Dhaf_3616 acetolactate synthase, small subunit; acetolactate synthase small subunit 179830 8736594 Acfer_0156 Acidaminococcus fermentans DSM 20731 acetolactate synthase small subunit YP_003397879.1 179327 R 591001 CDS YP_003397880.1 284047541 8736595 complement(179827..181524) 1 NC_013740.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: dhd:Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 181524 8736595 Acfer_0157 Acidaminococcus fermentans DSM 20731 acetolactate synthase large subunit YP_003397880.1 179827 R 591001 CDS YP_003397881.1 284047542 8736596 complement(181646..182656) 1 NC_013740.1 KEGG: ava:Ava_0133 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 182656 8736596 Acfer_0158 Acidaminococcus fermentans DSM 20731 ketol-acid reductoisomerase YP_003397881.1 181646 R 591001 CDS YP_003397882.1 284047543 8736597 complement(183117..183803) 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: chy:CHY_0092 DNA-binding response regulator; two component transcriptional regulator, winged helix family 183803 8736597 Acfer_0159 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003397882.1 183117 R 591001 CDS YP_003397883.1 284047544 8736598 complement(183775..185286) 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: cbe:Cbei_2920 integral membrane sensor signal transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 185286 8736598 Acfer_0160 Acidaminococcus fermentans DSM 20731 integral membrane sensor signal transduction histidine kinase YP_003397883.1 183775 R 591001 CDS YP_003397884.1 284047545 8736599 186056..187753 1 NC_013740.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: dhd:Dhaf_3617 acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 187753 8736599 Acfer_0161 Acidaminococcus fermentans DSM 20731 acetolactate synthase large subunit YP_003397884.1 186056 D 591001 CDS YP_003397885.1 284047546 8736600 187768..188307 1 NC_013740.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; KEGG: hmo:HM1_1980 acetolactate synthase, small subunit; acetolactate synthase small subunit 188307 8736600 Acfer_0162 Acidaminococcus fermentans DSM 20731 acetolactate synthase small subunit YP_003397885.1 187768 D 591001 CDS YP_003397886.1 284047547 8736601 188304..189557 1 NC_013740.1 PFAM: protein of unknown function DUF815; KEGG: cac:CAC3262 ABC transporter ATPase; hypothetical protein 189557 8736601 Acfer_0163 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397886.1 188304 D 591001 CDS YP_003397887.1 284047548 8736602 189618..190175 1 NC_013740.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: cdf:CD0601 methylated-DNA--protein-cysteine methyltransferase 1; methylated-DNA--protein-cysteine methyltransferase 190175 8736602 Acfer_0164 Acidaminococcus fermentans DSM 20731 methylated-DNA--protein-cysteine methyltransferase YP_003397887.1 189618 D 591001 CDS YP_003397888.1 284047549 8736603 complement(190200..191705) 1 NC_013740.1 PFAM: glycosyl transferase family 39; KEGG: geo:Geob_1553 glycosyl transferase family 39; glycosyl transferase family protein 191705 8736603 Acfer_0165 Acidaminococcus fermentans DSM 20731 glycosyl transferase family protein YP_003397888.1 190200 R 591001 CDS YP_003397889.1 284047550 8736604 191986..193095 1 NC_013740.1 PFAM: Haemagluttinin domain protein; YadA domain protein; KEGG: msu:MS0748 hypothetical protein; Hemagluttinin domain-containing protein 193095 8736604 Acfer_0166 Acidaminococcus fermentans DSM 20731 Hemagluttinin domain-containing protein YP_003397889.1 191986 D 591001 CDS YP_003397890.1 284047551 8736605 complement(193161..194282) 1 NC_013740.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: msu:MS0941 MetE protein; Methionine synthase vitamin-B12 independent 194282 8736605 Acfer_0167 Acidaminococcus fermentans DSM 20731 Methionine synthase vitamin-B12 independent YP_003397890.1 193161 R 591001 CDS YP_003397891.1 284047552 8736606 complement(194529..198815) 1 NC_013740.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type; KEGG: bth:BT_1407 activator of (R)-2- hydroxyglutaryl-CoA dehydratase; CoA-substrate-specific enzyme activase 198815 8736606 Acfer_0168 Acidaminococcus fermentans DSM 20731 CoA-substrate-specific enzyme activase YP_003397891.1 194529 R 591001 CDS YP_003397892.1 284047553 8736607 199232..200845 1 NC_013740.1 PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: amt:Amet_0163 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 200845 8736607 Acfer_0169 Acidaminococcus fermentans DSM 20731 polysaccharide biosynthesis protein YP_003397892.1 199232 D 591001 CDS YP_003397893.1 284047554 8736608 complement(200889..201314) 1 NC_013740.1 PFAM: Endoribonuclease L-PSP; KEGG: pde:Pden_3421 endoribonuclease L-PSP; endoribonuclease L-PSP 201314 8736608 Acfer_0170 Acidaminococcus fermentans DSM 20731 endoribonuclease L-PSP YP_003397893.1 200889 R 591001 CDS YP_003397894.1 284047555 8736609 complement(201330..202616) 1 NC_013740.1 PFAM: aminotransferase class V; KEGG: aoe:Clos_2343 aminotransferase class V; class V aminotransferase 202616 8736609 Acfer_0171 Acidaminococcus fermentans DSM 20731 class V aminotransferase YP_003397894.1 201330 R 591001 CDS YP_003397895.1 284047556 8736610 complement(202644..203858) 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: fnu:FN0605 aspartate aminotransferase; class I and II aminotransferase 203858 8736610 Acfer_0172 Acidaminococcus fermentans DSM 20731 class I and II aminotransferase YP_003397895.1 202644 R 591001 CDS YP_003397896.1 284047557 8736611 204220..205119 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: aoe:Clos_2342 LysR family transcriptional regulator; LysR family transcriptional regulator 205119 8736611 Acfer_0173 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003397896.1 204220 D 591001 CDS YP_003397897.1 284047558 8736612 complement(205317..206273) 1 NC_013740.1 PFAM: Peptidase M23; KEGG: tte:TTE0841 membrane proteins related to metalloendopeptidase; peptidase M23 206273 8736612 Acfer_0174 Acidaminococcus fermentans DSM 20731 peptidase M23 YP_003397897.1 205317 R 591001 CDS YP_003397898.1 284047559 8736613 complement(206599..207138) 1 NC_013740.1 PFAM: transcriptional regulator PadR family protein; KEGG: lpj:JDM1_2932 regulator of phenolic acid metabolism PadR; PadR family transcriptional regulator 207138 8736613 Acfer_0175 Acidaminococcus fermentans DSM 20731 PadR family transcriptional regulator YP_003397898.1 206599 R 591001 CDS YP_003397899.1 284047560 8736614 207334..208317 1 NC_013740.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: dze:Dd1591_3247 alpha/beta hydrolase fold-3 domain protein; Alpha/beta hydrolase fold-3 domain protein 208317 8736614 Acfer_0176 Acidaminococcus fermentans DSM 20731 Alpha/beta hydrolase fold-3 domain protein YP_003397899.1 207334 D 591001 CDS YP_003397900.1 284047561 8736615 208331..209122 1 NC_013740.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mjl:Mjls_0759 extradiol ring-cleavage dioxygenase III subunit B; extradiol ring-cleavage dioxygenase class III protein subunit B 209122 8736615 Acfer_0177 Acidaminococcus fermentans DSM 20731 extradiol ring-cleavage dioxygenase class III protein subunit B YP_003397900.1 208331 D 591001 CDS YP_003397901.1 284047562 8736616 209239..210633 1 NC_013740.1 PFAM: Aldehyde Dehydrogenase; KEGG: sak:SAK_1211 aldehyde dehydrogenase family protein; Aldehyde Dehydrogenase 210633 8736616 Acfer_0178 Acidaminococcus fermentans DSM 20731 Aldehyde Dehydrogenase YP_003397901.1 209239 D 591001 CDS YP_003397902.1 284047563 8736617 complement(210677..211918) 1 NC_013740.1 PFAM: peptidase M29 aminopeptidase II; KEGG: cpr:CPR_1965 aminopeptidase; peptidase M29 aminopeptidase II 211918 8736617 Acfer_0179 Acidaminococcus fermentans DSM 20731 peptidase M29 aminopeptidase II YP_003397902.1 210677 R 591001 CDS YP_003397903.1 284047564 8736618 212240..212551 1 NC_013740.1 KEGG: cth:Cthe_2261 hypothetical protein; hypothetical protein 212551 8736618 Acfer_0180 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397903.1 212240 D 591001 CDS YP_003397904.1 284047565 8736619 212545..214401 1 NC_013740.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: tex:Teth514_2369 H(+)-transporting two-sector ATPase; V-type ATPase 116 kDa subunit 214401 8736619 Acfer_0181 Acidaminococcus fermentans DSM 20731 V-type ATPase 116 kDa subunit YP_003397904.1 212545 D 591001 CDS YP_003397905.1 284047566 8736620 214416..214892 1 NC_013740.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: tpd:Teth39_2263 V-type ATP synthase subunit K; H+transporting two-sector ATPase subunit C 214892 8736620 Acfer_0182 Acidaminococcus fermentans DSM 20731 H+transporting two-sector ATPase subunit C YP_003397905.1 214416 D 591001 CDS YP_003397906.1 284047567 8736621 214909..215517 1 NC_013740.1 PFAM: H+transporting two-sector ATPase E subunit; KEGG: cth:Cthe_2264 H+-transporting two-sector ATPase, E subunit; H+transporting two-sector ATPase E subunit 215517 8736621 Acfer_0183 Acidaminococcus fermentans DSM 20731 H+transporting two-sector ATPase E subunit YP_003397906.1 214909 D 591001 CDS YP_003397907.1 284047568 8736622 215519..216514 1 NC_013740.1 PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: cbl:CLK_2013 V-type ATP synthase subunit C; H+transporting two-sector ATPase C (AC39) subunit 216514 8736622 Acfer_0184 Acidaminococcus fermentans DSM 20731 H+transporting two-sector ATPase C (AC39) subunit YP_003397907.1 215519 D 591001 CDS YP_003397908.1 284047569 8736623 216541..216867 1 NC_013740.1 PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: cdf:CD2956A V-type ATP synthase subunit F; Vacuolar H+transporting two-sector ATPase F subunit 216867 8736623 Acfer_0185 Acidaminococcus fermentans DSM 20731 Vacuolar H+transporting two-sector ATPase F subunit YP_003397908.1 216541 D 591001 CDS YP_003397909.1 284047570 8736624 216877..218649 1 NC_013740.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: tpd:Teth39_2259 ATP synthase, A subunit; H(+)-transporting two-sector ATPase 218649 8736624 Acfer_0186 Acidaminococcus fermentans DSM 20731 H(+)-transporting two-sector ATPase YP_003397909.1 216877 D 591001 CDS YP_003397910.1 284047571 8736625 218642..220033 1 NC_013740.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cth:Cthe_2268 V-type ATP synthase subunit B; H(+)-transporting two-sector ATPase 220033 8736625 Acfer_0187 Acidaminococcus fermentans DSM 20731 H(+)-transporting two-sector ATPase YP_003397910.1 218642 D 591001 CDS YP_003397911.1 284047572 8736626 220037..220672 1 NC_013740.1 TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit; KEGG: cpy:Cphy_3070 V-type ATP synthase subunit D; V-type ATPase subunit D 220672 8736626 Acfer_0188 Acidaminococcus fermentans DSM 20731 V-type ATPase subunit D YP_003397911.1 220037 D 591001 CDS YP_003397912.1 284047573 8736627 220785..222137 1 NC_013740.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: bha:BH0578 GntR family transcriptional regulator; GntR family transcriptional regulator 222137 8736627 Acfer_0189 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003397912.1 220785 D 591001 CDS YP_003397913.1 284047574 8736628 222230..222787 1 NC_013740.1 hypothetical protein 222787 8736628 Acfer_0190 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397913.1 222230 D 591001 CDS YP_003397914.1 284047575 8736629 222803..223378 1 NC_013740.1 PFAM: nitroreductase; KEGG: shi:Shel_04910 methylase involved in ubiquinone/menaquinone biosynthesis; nitroreductase 223378 8736629 Acfer_0191 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003397914.1 222803 D 591001 CDS YP_003397915.1 284047576 8736630 223406..224263 1 NC_013740.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cbk:CLL_A3210 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 224263 8736630 Acfer_0192 Acidaminococcus fermentans DSM 20731 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003397915.1 223406 D 591001 CDS YP_003397916.1 284047577 8736631 224260..225255 1 NC_013740.1 hypothetical protein 225255 8736631 Acfer_0193 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397916.1 224260 D 591001 CDS YP_003397917.1 284047578 8736632 225487..225954 1 NC_013740.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mba:Mbar_A3616 peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 225954 8736632 Acfer_0194 Acidaminococcus fermentans DSM 20731 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003397917.1 225487 D 591001 CDS YP_003397918.1 284047579 8736633 225951..226220 1 NC_013740.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: ere:EUBREC_0245 putative O-methyltransferase; Excinuclease ABC C subunit domain protein 226220 8736633 Acfer_0195 Acidaminococcus fermentans DSM 20731 Excinuclease ABC C subunit domain protein YP_003397918.1 225951 D 591001 CDS YP_003397919.1 284047580 8736634 226377..226574 1 NC_013740.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: pjd:Pjdr2_5748 cold-shock DNA-binding domain protein; cold-shock protein 226574 8736634 Acfer_0196 Acidaminococcus fermentans DSM 20731 cold-shock protein YP_003397919.1 226377 D 591001 CDS YP_003397920.1 284047581 8736635 226684..227439 1 NC_013740.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: tna:CTN_0365 oxidoreductase, short chain dehydrogenase/reductase family; short-chain dehydrogenase/reductase SDR 227439 8736635 Acfer_0197 Acidaminococcus fermentans DSM 20731 short-chain dehydrogenase/reductase SDR YP_003397920.1 226684 D 591001 CDS YP_003397921.1 284047582 8736636 227450..228793 1 NC_013740.1 TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; KEGG: efa:EF0243 branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 228793 8736636 Acfer_0198 Acidaminococcus fermentans DSM 20731 branched-chain amino acid transport system II carrier protein YP_003397921.1 227450 D 591001 CDS YP_003397922.1 284047583 8736637 228871..229479 1 NC_013740.1 KEGG: azc:AZC_3961 outer membrane protein Omp31 precursor; hypothetical protein 229479 8736637 Acfer_0199 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397922.1 228871 D 591001 CDS YP_003397923.1 284047584 8736638 229683..231353 1 NC_013740.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; surface antigen (D15); KEGG: gsu:GSU1153 OMP85 family outer membrane protein; Polypeptide-transport-associated domain protein ShlB-type 231353 8736638 Acfer_0200 Acidaminococcus fermentans DSM 20731 Polypeptide-transport-associated domain protein ShlB-type YP_003397923.1 229683 D 591001 CDS YP_003397924.1 284047585 8736639 231366..249080 1 NC_013740.1 TIGRFAM: adhesin HecA family; PFAM: Haemagluttinin repeat-containing protein; KEGG: dol:Dole_0612 hemolysin-type calcium-binding region; adhesin HecA family 249080 8736639 Acfer_0201 Acidaminococcus fermentans DSM 20731 adhesin HecA family YP_003397924.1 231366 D 591001 CDS YP_003397925.1 284047586 8736640 249164..249595 1 NC_013740.1 hypothetical protein 249595 8736640 Acfer_0202 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397925.1 249164 D 591001 CDS YP_003397926.1 284047587 8736642 complement(250152..250745) 1 NC_013740.1 PFAM: fumarate lyase; KEGG: cbe:Cbei_3220 aspartate ammonia-lyase; Aspartate ammonia-lyase 250745 8736642 Acfer_0203 Acidaminococcus fermentans DSM 20731 Aspartate ammonia-lyase YP_003397926.1 250152 R 591001 CDS YP_003397927.1 284047588 8736643 251010..251378 1 NC_013740.1 PFAM: LrgA family protein; KEGG: ctc:CTC01825 putative murein hydrolase exporter; LrgA family protein 251378 8736643 Acfer_0204 Acidaminococcus fermentans DSM 20731 LrgA family protein YP_003397927.1 251010 D 591001 CDS YP_003397928.1 284047589 8736644 251371..252054 1 NC_013740.1 PFAM: LrgB family protein; KEGG: ele:Elen_2909 LrgB family protein; LrgB family protein 252054 8736644 Acfer_0205 Acidaminococcus fermentans DSM 20731 LrgB family protein YP_003397928.1 251371 D 591001 CDS YP_003397929.1 284047590 8736645 252208..253362 1 NC_013740.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: cdf:CD2822 putative peptidase; peptidase dimerization domain-containing protein 253362 8736645 Acfer_0206 Acidaminococcus fermentans DSM 20731 peptidase dimerization domain-containing protein YP_003397929.1 252208 D 591001 CDS YP_003397930.1 284047591 8736646 253385..254824 1 NC_013740.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: amt:Amet_0661 C4-dicarboxylate anaerobic carrier; C4-dicarboxylate anaerobic carrier-like protein 254824 8736646 Acfer_0207 Acidaminococcus fermentans DSM 20731 C4-dicarboxylate anaerobic carrier-like protein YP_003397930.1 253385 D 591001 CDS YP_003397931.1 284047592 8736647 255255..256238 1 NC_013740.1 PFAM: Bile acid:sodium symporter; KEGG: mmp:MMP0653 bile acid:sodium symporter; bile acid:sodium symporter 256238 8736647 Acfer_0208 Acidaminococcus fermentans DSM 20731 bile acid:sodium symporter YP_003397931.1 255255 D 591001 CDS YP_003397932.1 284047593 8736648 256239..257078 1 NC_013740.1 hypothetical protein 257078 8736648 Acfer_0209 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397932.1 256239 D 591001 CDS YP_003397933.1 284047594 8736649 257170..258045 1 NC_013740.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: cpf:CPF_0381 2-hydroxy-3-oxopropionate reductase; 6-phosphogluconate dehydrogenase 258045 8736649 Acfer_0210 Acidaminococcus fermentans DSM 20731 6-phosphogluconate dehydrogenase YP_003397933.1 257170 D 591001 CDS YP_003397934.1 284047595 8736650 258175..259218 1 NC_013740.1 PFAM: extracellular solute-binding protein family 1; KEGG: sth:STH1146 ABC transporter substrate-binding protein; extracellular solute-binding protein 259218 8736650 Acfer_0211 Acidaminococcus fermentans DSM 20731 extracellular solute-binding protein YP_003397934.1 258175 D 591001 CDS YP_003397935.1 284047596 8736651 259332..261014 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH1147 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein 261014 8736651 Acfer_0212 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003397935.1 259332 D 591001 CDS YP_003397936.1 284047597 8736652 261029..262099 1 NC_013740.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tga:TGAM_1014 ABC-type transport system, ATPase component, putative Fe3+ transporter (FbpC/AfuC); ABC transporter 262099 8736652 Acfer_0213 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397936.1 261029 D 591001 CDS YP_003397937.1 284047598 8736653 262270..262650 1 NC_013740.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: apv:Apar_0245 endoribonuclease L-PSP; endoribonuclease L-PSP 262650 8736653 Acfer_0214 Acidaminococcus fermentans DSM 20731 endoribonuclease L-PSP YP_003397937.1 262270 D 591001 CDS YP_003397938.1 284047599 8736654 complement(262772..263524) 1 NC_013740.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reu:Reut_B5545 regulatory protein, IclR; transcriptional regulator, IclR family 263524 8736654 Acfer_0215 Acidaminococcus fermentans DSM 20731 transcriptional regulator, IclR family YP_003397938.1 262772 R 591001 CDS YP_003397939.1 284047600 8736655 263715..264683 1 NC_013740.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: ppg:PputGB1_3103 agmatinase; Arginase/agmatinase/formiminoglutamase 264683 8736655 Acfer_0216 Acidaminococcus fermentans DSM 20731 Arginase/agmatinase/formiminoglutamase YP_003397939.1 263715 D 591001 CDS YP_003397940.1 284047601 8736656 264687..265205 1 NC_013740.1 KEGG: cpy:Cphy_2765 hypothetical protein; hypothetical protein 265205 8736656 Acfer_0217 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397940.1 264687 D 591001 CDS YP_003397941.1 284047602 8736657 complement(265344..265676) 1 NC_013740.1 PFAM: branched-chain amino acid transport; KEGG: dps:DP2464 hypothetical protein; branched-chain amino acid transport 265676 8736657 Acfer_0218 Acidaminococcus fermentans DSM 20731 branched-chain amino acid transport YP_003397941.1 265344 R 591001 CDS YP_003397942.1 284047603 8736658 complement(265673..266449) 1 NC_013740.1 PFAM: AzlC family protein; KEGG: sfu:Sfum_0194 AzlC family protein; AzlC family protein 266449 8736658 Acfer_0219 Acidaminococcus fermentans DSM 20731 AzlC family protein YP_003397942.1 265673 R 591001 CDS YP_003397943.1 284047604 8736659 266632..267897 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: kol:Kole_1784 hypothetical protein; hypothetical protein 267897 8736659 Acfer_0220 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397943.1 266632 D 591001 CDS YP_003397944.1 284047605 8736660 267881..268966 1 NC_013740.1 KEGG: hmo:HM1_2036 phosphoserine aminotransferase; TIGRFAM: phosphoserine aminotransferase; PFAM: aminotransferase class V; phosphoserine aminotransferase 268966 8736660 Acfer_0221 Acidaminococcus fermentans DSM 20731 phosphoserine aminotransferase YP_003397944.1 267881 D 591001 CDS YP_003397945.1 284047606 8736661 268979..270235 1 NC_013740.1 TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: fnu:FN1801 sodium/glutamate symport carrier protein; sodium/glutamate symporter 270235 8736661 Acfer_0222 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003397945.1 268979 D 591001 CDS YP_003397946.1 284047607 8736662 270469..271023 1 NC_013740.1 PFAM: LemA family protein; KEGG: dhd:Dhaf_0874 LemA family protein; LemA family protein 271023 8736662 Acfer_0223 Acidaminococcus fermentans DSM 20731 LemA family protein YP_003397946.1 270469 D 591001 CDS YP_003397947.1 284047608 8736663 271054..271833 1 NC_013740.1 PFAM: protein of unknown function DUF477; KEGG: dhd:Dhaf_0875 protein of unknown function DUF477; hypothetical protein 271833 8736663 Acfer_0224 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397947.1 271054 D 591001 CDS YP_003397948.1 284047609 8736664 complement(272138..273559) 1 NC_013740.1 PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; KEGG: bvu:BVU_0349 thiamine biosynthesis protein ThiH; biotin and thiamin synthesis associated protein 273559 8736664 Acfer_0225 Acidaminococcus fermentans DSM 20731 biotin and thiamin synthesis associated protein YP_003397948.1 272138 R 591001 CDS YP_003397949.1 284047610 8736665 complement(273899..274426) 1 NC_013740.1 hypothetical protein 274426 8736665 Acfer_0226 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397949.1 273899 R 591001 CDS YP_003397950.1 284047611 8736667 274889..276166 1 NC_013740.1 TIGRFAM: GTP-binding protein Obg/CgtA; small GTP- binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; KEGG: chy:CHY_0370 GTPase ObgE; GTP-binding protein Obg/CgtA 276166 8736667 Acfer_0227 Acidaminococcus fermentans DSM 20731 GTP-binding protein Obg/CgtA YP_003397950.1 274889 D 591001 CDS YP_003397951.1 284047612 8736668 276206..277351 1 NC_013740.1 KEGG: pth:PTH_0834 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; glutamate 5-kinase 277351 8736668 Acfer_0228 Acidaminococcus fermentans DSM 20731 glutamate 5-kinase YP_003397951.1 276206 D 591001 CDS YP_003397952.1 284047613 8736669 277365..278621 1 NC_013740.1 TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; KEGG: mta:Moth_0563 gamma-glutamyl phosphate reductase; gamma-glutamyl phosphate reductase 278621 8736669 Acfer_0229 Acidaminococcus fermentans DSM 20731 gamma-glutamyl phosphate reductase YP_003397952.1 277365 D 591001 CDS YP_003397953.1 284047614 8736670 278809..279879 1 NC_013740.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: ppd:Ppro_3233 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit 279879 8736670 Acfer_0230 Acidaminococcus fermentans DSM 20731 RND family efflux transporter MFP subunit YP_003397953.1 278809 D 591001 CDS YP_003397954.1 284047615 8736671 279899..280597 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cth:Cthe_1763 ABC transporter related protein; ABC transporter 280597 8736671 Acfer_0231 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397954.1 279899 D 591001 CDS YP_003397955.1 284047616 8736672 280590..281804 1 NC_013740.1 PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein; hypothetical protein 281804 8736672 Acfer_0232 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397955.1 280590 D 591001 CDS YP_003397956.1 284047617 8736673 281785..281964 1 NC_013740.1 hypothetical protein 281964 8736673 Acfer_0233 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397956.1 281785 D 591001 CDS YP_003397957.1 284047618 8736674 complement(282021..282584) 1 NC_013740.1 PFAM: protein of unknown function DUF886; KEGG: tde:TDE2575 hypothetical protein; hypothetical protein 282584 8736674 Acfer_0234 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397957.1 282021 R 591001 CDS YP_003397958.1 284047619 8736675 282786..283691 1 NC_013740.1 KEGG: ctc:CTC02305 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein; glutamate formiminotransferase 283691 8736675 Acfer_0235 Acidaminococcus fermentans DSM 20731 glutamate formiminotransferase YP_003397958.1 282786 D 591001 CDS YP_003397959.1 284047620 8736676 283719..285389 1 NC_013740.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: ctc:CTC02304 formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 285389 8736676 Acfer_0236 Acidaminococcus fermentans DSM 20731 Formate--tetrahydrofolate ligase YP_003397959.1 283719 D 591001 CDS YP_003397960.1 284047621 8736677 285409..286029 1 NC_013740.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: ctc:CTC02303 formiminotetrahydrofolate cyclodeaminase; Formimidoyltetrahydrofolate cyclodeaminase 286029 8736677 Acfer_0237 Acidaminococcus fermentans DSM 20731 Formimidoyltetrahydrofolate cyclodeaminase YP_003397960.1 285409 D 591001 CDS YP_003397961.1 284047622 8736678 286125..287702 1 NC_013740.1 PFAM: transposase IS4 family protein; KEGG: dsy:DSY1297 hypothetical protein; transposase IS4 family protein 287702 8736678 Acfer_0238 Acidaminococcus fermentans DSM 20731 transposase IS4 family protein YP_003397961.1 286125 D 591001 CDS YP_003397962.1 284047623 8736681 289478..291007 1 NC_013740.1 KEGG: sfu:Sfum_2378 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 291007 8736681 Acfer_0241 Acidaminococcus fermentans DSM 20731 histidine ammonia-lyase YP_003397962.1 289478 D 591001 CDS YP_003397963.1 284047624 8736682 291266..292570 1 NC_013740.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: ctc:CTC02311 transport protein (putative Na+/H+ antiporter, hisidine permease); Na+/H+ antiporter NhaC-like protein 292570 8736682 Acfer_0242 Acidaminococcus fermentans DSM 20731 Na+/H+ antiporter NhaC-like protein YP_003397963.1 291266 D 591001 CDS YP_003397964.1 284047625 8736683 292642..294201 1 NC_013740.1 KEGG: ctc:CTC02318 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; histidine ammonia-lyase 294201 8736683 Acfer_0243 Acidaminococcus fermentans DSM 20731 histidine ammonia-lyase YP_003397964.1 292642 D 591001 CDS YP_003397965.1 284047626 8736684 complement(294305..295720) 1 NC_013740.1 PFAM: FAD linked oxidase domain protein; KEGG: fnu:FN1536 (S)-2-hydroxy-acid oxidase chain D; FAD linked oxidase domain-containing protein 295720 8736684 Acfer_0244 Acidaminococcus fermentans DSM 20731 FAD linked oxidase domain-containing protein YP_003397965.1 294305 R 591001 CDS YP_003397966.1 284047627 8736685 295935..297566 1 NC_013740.1 KEGG: bbe:BBR47_47820 hypothetical protein; hypothetical protein 297566 8736685 Acfer_0245 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397966.1 295935 D 591001 CDS YP_003397967.1 284047628 8736686 297674..298825 1 NC_013740.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dma:DMR_04350 efflux system protein; RND family efflux transporter MFP subunit 298825 8736686 Acfer_0246 Acidaminococcus fermentans DSM 20731 RND family efflux transporter MFP subunit YP_003397967.1 297674 D 591001 CDS YP_003397968.1 284047629 8736687 298839..301988 1 NC_013740.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: dsa:Desal_3289 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 301988 8736687 Acfer_0247 Acidaminococcus fermentans DSM 20731 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_003397968.1 298839 D 591001 CDS YP_003397969.1 284047630 8736688 302108..303865 1 NC_013740.1 PFAM: ABC transporter domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_0638 ABC transporter; ABC transporter domain-containing protein 303865 8736688 Acfer_0248 Acidaminococcus fermentans DSM 20731 ABC transporter domain-containing protein YP_003397969.1 302108 D 591001 CDS YP_003397970.1 284047631 8736689 303888..305240 1 NC_013740.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: hmo:HM1_1545 sodium:alanine symporter; amino acid carrier protein 305240 8736689 Acfer_0249 Acidaminococcus fermentans DSM 20731 amino acid carrier protein YP_003397970.1 303888 D 591001 CDS YP_003397971.1 284047632 8736690 305520..306701 1 NC_013740.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: cpy:Cphy_0262 beta-lactamase domain- containing protein; flavodoxin/nitric oxide synthase 306701 8736690 Acfer_0250 Acidaminococcus fermentans DSM 20731 flavodoxin/nitric oxide synthase YP_003397971.1 305520 D 591001 CDS YP_003397972.1 284047633 8736691 306811..307563 1 NC_013740.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: drm:Dred_0196 RNA methyltransferase; TrmH family RNA methyltransferase 307563 8736691 Acfer_0251 Acidaminococcus fermentans DSM 20731 TrmH family RNA methyltransferase YP_003397972.1 306811 D 591001 CDS YP_003397973.1 284047634 8736692 307581..308315 1 NC_013740.1 TIGRFAM: RNA polymerase sigma-H factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: chy:CHY_2333 RNA polymerase factor sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 308315 8736692 Acfer_0252 Acidaminococcus fermentans DSM 20731 ECF subfamily RNA polymerase sigma-24 subunit YP_003397973.1 307581 D 591001 CDS YP_003397974.1 284047635 8736693 308436..308897 1 NC_013740.1 KEGG: ace:Acel_0811 hypothetical protein; hypothetical protein 308897 8736693 Acfer_0253 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397974.1 308436 D 591001 CDS YP_003397975.1 284047636 8736694 308920..310038 1 NC_013740.1 KEGG: pth:PTH_1386 6-phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase; phosphofructokinase 310038 8736694 Acfer_0254 Acidaminococcus fermentans DSM 20731 phosphofructokinase YP_003397975.1 308920 D 591001 CDS YP_003397976.1 284047637 8736695 310188..310991 1 NC_013740.1 KEGG: hmo:HM1_1680 undecaprenol diphosphatase, putative; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 310991 8736695 Acfer_0255 Acidaminococcus fermentans DSM 20731 undecaprenol kinase YP_003397976.1 310188 D 591001 CDS YP_003397977.1 284047638 8736701 311623..312816 1 NC_013740.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; KEGG: aac:Aaci_2713 translation elongation factor Tu; translation elongation factor Tu 312816 8736701 Acfer_0256 Acidaminococcus fermentans DSM 20731 translation elongation factor Tu YP_003397977.1 311623 D 591001 CDS YP_003397978.1 284047639 8736702 312955..313116 1 NC_013740.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: tpd:Teth39_0359 50S ribosomal protein L33; 50S ribosomal protein L33 313116 8736702 Acfer_0257 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L33 YP_003397978.1 312955 D 591001 CDS YP_003397979.1 284047640 8736703 313128..313352 1 NC_013740.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: bfa:Bfae_24000 preprotein translocase, SecE subunit; Preprotein translocase subunit SecE 313352 8736703 Acfer_0258 Acidaminococcus fermentans DSM 20731 Preprotein translocase subunit SecE YP_003397979.1 313128 D 591001 CDS YP_003397980.1 284047641 8736704 313355..313930 1 NC_013740.1 KEGG: pth:PTH_0305 transcription antiterminator; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; SMART: NGN domain protein; NusG antitermination factor 313930 8736704 Acfer_0259 Acidaminococcus fermentans DSM 20731 NusG antitermination factor YP_003397980.1 313355 D 591001 CDS YP_003397981.1 284047642 8736705 313948..314373 1 NC_013740.1 KEGG: gwc:GWCH70_0098 ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; 50S ribosomal protein L11 314373 8736705 Acfer_0260 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L11 YP_003397981.1 313948 D 591001 CDS YP_003397982.1 284047643 8736706 314428..315129 1 NC_013740.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: bcg:BCG9842_B5208 50S ribosomal protein L1; 50S ribosomal protein L1 315129 8736706 Acfer_0261 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L1 YP_003397982.1 314428 D 591001 CDS YP_003397983.1 284047644 8736707 315290..315823 1 NC_013740.1 PFAM: ribosomal protein L10; KEGG: mta:Moth_2470 50S ribosomal protein L10; 50S ribosomal protein L10 315823 8736707 Acfer_0262 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L10 YP_003397983.1 315290 D 591001 CDS YP_003397984.1 284047645 8736708 315898..316263 1 NC_013740.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: bha:BH0122 50S ribosomal protein L7/L12; 50S ribosomal protein L7/L12 316263 8736708 Acfer_0263 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L7/L12 YP_003397984.1 315898 D 591001 CDS YP_003397985.1 284047646 8736709 316649..317674 1 NC_013740.1 PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; KEGG: yen:YE4181 ABC transporter; ABC transporter 317674 8736709 Acfer_0264 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397985.1 316649 D 591001 CDS YP_003397986.1 284047647 8736710 317671..318336 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4182 ABC transporter permease; binding-protein-dependent transport system inner membrane protein 318336 8736710 Acfer_0265 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003397986.1 317671 D 591001 CDS YP_003397987.1 284047648 8736711 318358..319209 1 NC_013740.1 PFAM: NLPA lipoprotein; KEGG: bld:BLi03178 hypothetical protein; NLPA lipoprotein 319209 8736711 Acfer_0266 Acidaminococcus fermentans DSM 20731 NLPA lipoprotein YP_003397987.1 318358 D 591001 CDS YP_003397988.1 284047649 8736712 319275..320450 1 NC_013740.1 KEGG: cdf:CD1086 putative peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 320450 8736712 Acfer_0267 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003397988.1 319275 D 591001 CDS YP_003397989.1 284047650 8736713 320523..320981 1 NC_013740.1 PFAM: protein of unknown function DUF441; KEGG: lba:Lebu_0431 protein of unknown function DUF441; hypothetical protein 320981 8736713 Acfer_0268 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397989.1 320523 D 591001 CDS YP_003397990.1 284047651 8736714 complement(321119..321541) 1 NC_013740.1 TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; KEGG: eel:EUBELI_00571 hypothetical protein; flavodoxin 321541 8736714 Acfer_0269 Acidaminococcus fermentans DSM 20731 flavodoxin YP_003397990.1 321119 R 591001 CDS YP_003397991.1 284047652 8736715 complement(321589..322152) 1 NC_013740.1 KEGG: eel:EUBELI_00570 hypothetical protein; hypothetical protein 322152 8736715 Acfer_0270 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397991.1 321589 R 591001 CDS YP_003397992.1 284047653 8736716 322395..323924 1 NC_013740.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: dat:HRM2_48490 outer membrane protein; NodT family RND efflux system outer membrane lipoprotein 323924 8736716 Acfer_0271 Acidaminococcus fermentans DSM 20731 NodT family RND efflux system outer membrane lipoprotein YP_003397992.1 322395 D 591001 CDS YP_003397993.1 284047654 8736717 323921..324961 1 NC_013740.1 PFAM: secretion protein HlyD family protein; KEGG: bbr:BB2383 HlyD family secretion protein; secretion protein HlyD family protein 324961 8736717 Acfer_0272 Acidaminococcus fermentans DSM 20731 secretion protein HlyD family protein YP_003397993.1 323921 D 591001 CDS YP_003397994.1 284047655 8736718 324954..326702 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pag:PLES_25911 ATP-binding protein; ABC transporter 326702 8736718 Acfer_0273 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003397994.1 324954 D 591001 CDS YP_003397995.1 284047656 8736719 326699..327808 1 NC_013740.1 PFAM: ABC-2 type transporter; KEGG: nmu:Nmul_A1420 hypothetical protein; ABC-2 type transporter 327808 8736719 Acfer_0274 Acidaminococcus fermentans DSM 20731 ABC-2 type transporter YP_003397995.1 326699 D 591001 CDS YP_003397996.1 284047657 8736720 327809..328924 1 NC_013740.1 PFAM: ABC-2 type transporter; KEGG: vap:Vapar_1738 ABC-2 type transporter; ABC-2 type transporter 328924 8736720 Acfer_0275 Acidaminococcus fermentans DSM 20731 ABC-2 type transporter YP_003397996.1 327809 D 591001 CDS YP_003397997.1 284047658 8736721 329087..330202 1 NC_013740.1 PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: sth:STH1479 putative peptidase; peptidase dimerization domain-containing protein 330202 8736721 Acfer_0276 Acidaminococcus fermentans DSM 20731 peptidase dimerization domain-containing protein YP_003397997.1 329087 D 591001 CDS YP_003397998.1 284047659 8736722 330380..331156 1 NC_013740.1 KEGG: sto:ST1078 hypothetical protein; hypothetical protein 331156 8736722 Acfer_0277 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003397998.1 330380 D 591001 CDS YP_003397999.1 284047660 8736723 331176..331766 1 NC_013740.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: shi:Shel_22480 hypothetical protein; SH3 type 3 domain-containing protein 331766 8736723 Acfer_0278 Acidaminococcus fermentans DSM 20731 SH3 type 3 domain-containing protein YP_003397999.1 331176 D 591001 CDS YP_003398000.1 284047661 8736724 331791..332408 1 NC_013740.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bfs:BF0621 putative ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 332408 8736724 Acfer_0279 Acidaminococcus fermentans DSM 20731 ErfK/YbiS/YcfS/YnhG family protein YP_003398000.1 331791 D 591001 CDS YP_003398001.1 284047662 8736725 332451..332741 1 NC_013740.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aac:Aaci_2326 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 332741 8736725 Acfer_0280 Acidaminococcus fermentans DSM 20731 N-acetyltransferase GCN5 YP_003398001.1 332451 D 591001 CDS YP_003398002.1 284047663 8736726 333218..334681 1 NC_013740.1 PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; KEGG: cce:Ccel_3213 anthranilate synthase component I; anthranilate synthase 334681 8736726 Acfer_0281 Acidaminococcus fermentans DSM 20731 anthranilate synthase YP_003398002.1 333218 D 591001 CDS YP_003398003.1 284047664 8736727 334683..335261 1 NC_013740.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: ere:EUBREC_2979 anthranilate/para- aminobenzoate synthase component II, TrpG; glutamine amidotransferase of anthranilate synthase 335261 8736727 Acfer_0282 Acidaminococcus fermentans DSM 20731 glutamine amidotransferase of anthranilate synthase YP_003398003.1 334683 D 591001 CDS YP_003398004.1 284047665 8736728 335283..336305 1 NC_013740.1 KEGG: ere:EUBREC_2978 anthranilate phosphoribosyltransferase, TrpD; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 336305 8736728 Acfer_0283 Acidaminococcus fermentans DSM 20731 anthranilate phosphoribosyltransferase YP_003398004.1 335283 D 591001 CDS YP_003398005.1 284047666 8736729 336322..337107 1 NC_013740.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: cce:Ccel_3216 indole-3-glycerol phosphate synthase; indole-3-glycerol-phosphate synthase 337107 8736729 Acfer_0284 Acidaminococcus fermentans DSM 20731 indole-3-glycerol-phosphate synthase YP_003398005.1 336322 D 591001 CDS YP_003398006.1 284047667 8736730 337104..337730 1 NC_013740.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: cce:Ccel_3217 N- (5'phosphoribosyl)anthranilate isomerase (PRAI); Phosphoribosylanthranilate isomerase 337730 8736730 Acfer_0285 Acidaminococcus fermentans DSM 20731 Phosphoribosylanthranilate isomerase YP_003398006.1 337104 D 591001 CDS YP_003398007.1 284047668 8736731 337727..338911 1 NC_013740.1 TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cth:Cthe_1412 tryptophan synthase subunit beta; tryptophan synthase subunit beta 338911 8736731 Acfer_0286 Acidaminococcus fermentans DSM 20731 tryptophan synthase subunit beta YP_003398007.1 337727 D 591001 CDS YP_003398008.1 284047669 8736732 338904..339686 1 NC_013740.1 KEGG: cth:Cthe_1411 tryptophan synthase, alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 339686 8736732 Acfer_0287 Acidaminococcus fermentans DSM 20731 tryptophan synthase subunit alpha YP_003398008.1 338904 D 591001 CDS YP_003398009.1 284047670 8736733 340070..341446 1 NC_013740.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: sth:STH1883 LytR family transcriptional regulator; cell envelope-related transcriptional attenuator 341446 8736733 Acfer_0288 Acidaminococcus fermentans DSM 20731 cell envelope-related transcriptional attenuator YP_003398009.1 340070 D 591001 CDS YP_003398010.1 284047671 8736734 341726..341905 1 NC_013740.1 hypothetical protein 341905 8736734 Acfer_0289 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398010.1 341726 D 591001 CDS YP_003398011.1 284047672 8736735 342012..342878 1 NC_013740.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: mta:Moth_1558 shikimate dehydrogenase; shikimate dehydrogenase 342878 8736735 Acfer_0290 Acidaminococcus fermentans DSM 20731 shikimate dehydrogenase YP_003398011.1 342012 D 591001 CDS YP_003398012.1 284047673 8736736 342907..343527 1 NC_013740.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bha:BH2672 C4-dicarboxylate transport system (permease small protein); tripartite AtP-independent periplasmic transporter subunit DctQ 343527 8736736 Acfer_0291 Acidaminococcus fermentans DSM 20731 tripartite AtP-independent periplasmic transporter subunit DctQ YP_003398012.1 342907 D 591001 CDS YP_003398013.1 284047674 8736737 343530..344825 1 NC_013740.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: ere:EUBREC_2838 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 344825 8736737 Acfer_0292 Acidaminococcus fermentans DSM 20731 TRAP dicarboxylate transporter subunit DctM YP_003398013.1 343530 D 591001 CDS YP_003398014.1 284047675 8736738 344854..345921 1 NC_013740.1 PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: ere:EUBREC_2837 hypothetical protein; extracellular solute-binding protein 345921 8736738 Acfer_0293 Acidaminococcus fermentans DSM 20731 extracellular solute-binding protein YP_003398014.1 344854 D 591001 CDS YP_003398015.1 284047676 8736739 complement(345997..346749) 1 NC_013740.1 KEGG: kpn:KPN_00073 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type I; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase 346749 8736739 Acfer_0294 Acidaminococcus fermentans DSM 20731 3-dehydroquinate dehydratase YP_003398015.1 345997 R 591001 CDS YP_003398016.1 284047677 8736740 346997..348553 1 NC_013740.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: sub:SUB1326 C4-dicarboxylate anaerobic carrier protein; C4-dicarboxylate anaerobic carrier-like protein 348553 8736740 Acfer_0295 Acidaminococcus fermentans DSM 20731 C4-dicarboxylate anaerobic carrier-like protein YP_003398016.1 346997 D 591001 CDS YP_003398017.1 284047678 8736741 348604..350043 1 NC_013740.1 KEGG: ere:EUBREC_0889 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 350043 8736741 Acfer_0296 Acidaminococcus fermentans DSM 20731 aminoacyl-histidine dipeptidase YP_003398017.1 348604 D 591001 CDS YP_003398018.1 284047679 8736742 350055..350624 1 NC_013740.1 KEGG: eel:EUBELI_20105 hypothetical protein; hypothetical protein 350624 8736742 Acfer_0297 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398018.1 350055 D 591001 CDS YP_003398019.1 284047680 8736743 350735..352375 1 NC_013740.1 PFAM: glycosyl transferase family 39; KEGG: ote:Oter_1409 glycosyl transferase family protein; glycosyl transferase family protein 352375 8736743 Acfer_0298 Acidaminococcus fermentans DSM 20731 glycosyl transferase family protein YP_003398019.1 350735 D 591001 CDS YP_003398020.1 284047681 8736744 352382..352873 1 NC_013740.1 hypothetical protein 352873 8736744 Acfer_0299 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398020.1 352382 D 591001 CDS YP_003398021.1 284047682 8736745 complement(353063..353944) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: gme:Gmet_1684 LysR family transcriptional regulator; LysR family transcriptional regulator 353944 8736745 Acfer_0300 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398021.1 353063 R 591001 CDS YP_003398022.1 284047683 8736746 354217..354777 1 NC_013740.1 PFAM: BioY protein; KEGG: dae:Dtox_4332 BioY protein; BioY protein 354777 8736746 Acfer_0301 Acidaminococcus fermentans DSM 20731 BioY protein YP_003398022.1 354217 D 591001 CDS YP_003398023.1 284047684 8736747 354779..355645 1 NC_013740.1 KEGG: saf:SULAZ_0549 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 355645 8736747 Acfer_0302 Acidaminococcus fermentans DSM 20731 porphobilinogen deaminase YP_003398023.1 354779 D 591001 CDS YP_003398024.1 284047685 8736748 355632..357101 1 NC_013740.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: mta:Moth_1248 uroporphyrinogen-III C- methyltransferase / uroporphyrinogen-III synthase; uroporphyrin-III C-methyltransferase 357101 8736748 Acfer_0303 Acidaminococcus fermentans DSM 20731 uroporphyrin-III C-methyltransferase YP_003398024.1 355632 D 591001 CDS YP_003398025.1 284047686 8736749 357098..357676 1 NC_013740.1 TIGRFAM: siroheme synthase; KEGG: ttu:TERTU_1974 siroheme synthase; siroheme synthase 357676 8736749 Acfer_0304 Acidaminococcus fermentans DSM 20731 siroheme synthase YP_003398025.1 357098 D 591001 CDS YP_003398026.1 284047687 8736750 357824..358372 1 NC_013740.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: ctc:CTC00826 rubredoxin/rubrerythrin domain- containing protein; rubrerythrin 358372 8736750 Acfer_0305 Acidaminococcus fermentans DSM 20731 rubrerythrin YP_003398026.1 357824 D 591001 CDS YP_003398027.1 284047688 8736751 358460..359089 1 NC_013740.1 PFAM: protein of unknown function DUF1121; KEGG: eel:EUBELI_01180 hypothetical protein; hypothetical protein 359089 8736751 Acfer_0306 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398027.1 358460 D 591001 CDS YP_003398028.1 284047689 8736752 359181..360227 1 NC_013740.1 KEGG: smu:SMU.1010 putative citrate lyase ligase; TIGRFAM: citrate lyase ligase; cytidyltransferase- related domain protein; PFAM: Citrate lyase ligase domain protein; SMART: Citrate lyase ligase domain protein; citrate lyase ligase 360227 8736752 Acfer_0307 Acidaminococcus fermentans DSM 20731 citrate lyase ligase YP_003398028.1 359181 D 591001 CDS YP_003398029.1 284047690 8736753 360447..361625 1 NC_013740.1 KEGG: chy:CHY_0138 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 361625 8736753 Acfer_0308 Acidaminococcus fermentans DSM 20731 S-adenosylmethionine synthetase YP_003398029.1 360447 D 591001 CDS YP_003398030.1 284047691 8736754 361627..364020 1 NC_013740.1 KEGG: bsu:BSU15710 primosome assembly protein PriA; TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 364020 8736754 Acfer_0309 Acidaminococcus fermentans DSM 20731 primosomal protein N' YP_003398030.1 361627 D 591001 CDS YP_003398031.1 284047692 8736755 364174..364650 1 NC_013740.1 KEGG: dhd:Dhaf_3853 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase 364650 8736755 Acfer_0310 Acidaminococcus fermentans DSM 20731 peptide deformylase YP_003398031.1 364174 D 591001 CDS YP_003398032.1 284047693 8736756 364647..365585 1 NC_013740.1 KEGG: cno:NT01CX_2244 methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase 365585 8736756 Acfer_0311 Acidaminococcus fermentans DSM 20731 methionyl-tRNA formyltransferase YP_003398032.1 364647 D 591001 CDS YP_003398033.1 284047694 8736757 365590..366363 1 NC_013740.1 PFAM: protein of unknown function DUF116; KEGG: gbm:Gbem_0636 protein of unknown function DUF116; hypothetical protein 366363 8736757 Acfer_0312 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398033.1 365590 D 591001 CDS YP_003398034.1 284047695 8736758 366360..367700 1 NC_013740.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: drm:Dred_1707 sun protein; sun protein 367700 8736758 Acfer_0313 Acidaminococcus fermentans DSM 20731 sun protein YP_003398034.1 366360 D 591001 CDS YP_003398035.1 284047696 8736759 367709..368770 1 NC_013740.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: afl:Aflv_1788 predicted Fe-S-cluster redox enzyme; radical SAM enzyme, Cfr family 368770 8736759 Acfer_0314 Acidaminococcus fermentans DSM 20731 radical SAM enzyme, Cfr family YP_003398035.1 367709 D 591001 CDS YP_003398036.1 284047697 8736760 368767..369498 1 NC_013740.1 KEGG: ele:Elen_3041 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; protein serine/threonine phosphatase 369498 8736760 Acfer_0315 Acidaminococcus fermentans DSM 20731 protein serine/threonine phosphatase YP_003398036.1 368767 D 591001 CDS YP_003398037.1 284047698 8736761 369483..371456 1 NC_013740.1 PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine- protein kinase, subgroup, catalytic domain; PASTA domain containing protein; KEGG: ate:Athe_1045 serine/threonine protein kinase with PASTA sensor(s); serine/threonine protein kinase with PASTA sensor(s) 371456 8736761 Acfer_0316 Acidaminococcus fermentans DSM 20731 serine/threonine protein kinase with PASTA sensor(s) YP_003398037.1 369483 D 591001 CDS YP_003398038.1 284047699 8736762 371453..372340 1 NC_013740.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: pjd:Pjdr2_3749 ribosome small subunit- dependent GTPase A; ribosome small subunit-dependent GTPase A 372340 8736762 Acfer_0317 Acidaminococcus fermentans DSM 20731 ribosome small subunit-dependent GTPase A YP_003398038.1 371453 D 591001 CDS YP_003398039.1 284047700 8736763 372337..372978 1 NC_013740.1 KEGG: sat:SYN_01763 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 372978 8736763 Acfer_0318 Acidaminococcus fermentans DSM 20731 ribulose-phosphate 3-epimerase YP_003398039.1 372337 D 591001 CDS YP_003398040.1 284047701 8736764 372983..374302 1 NC_013740.1 hypothetical protein 374302 8736764 Acfer_0319 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398040.1 372983 D 591001 CDS YP_003398041.1 284047702 8736765 374357..375313 1 NC_013740.1 PFAM: periplasmic binding protein; KEGG: cce:Ccel_3204 periplasmic binding protein; periplasmic binding protein 375313 8736765 Acfer_0320 Acidaminococcus fermentans DSM 20731 periplasmic binding protein YP_003398041.1 374357 D 591001 CDS YP_003398042.1 284047703 8736766 375315..376142 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nph:NP3818A corrinoid ABC transporter ATPase; ABC transporter 376142 8736766 Acfer_0321 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398042.1 375315 D 591001 CDS YP_003398043.1 284047704 8736767 376147..376785 1 NC_013740.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: ote:Oter_2347 MotA/TolQ/ExbB proton channel; MotA/TolQ/ExbB proton channel 376785 8736767 Acfer_0322 Acidaminococcus fermentans DSM 20731 MotA/TolQ/ExbB proton channel YP_003398043.1 376147 D 591001 CDS YP_003398044.1 284047705 8736768 376782..377198 1 NC_013740.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mno:Mnod_1396 protein TolR; biopolymer transport protein ExbD/TolR 377198 8736768 Acfer_0323 Acidaminococcus fermentans DSM 20731 biopolymer transport protein ExbD/TolR YP_003398044.1 376782 D 591001 CDS YP_003398045.1 284047706 8736769 377191..377961 1 NC_013740.1 TIGRFAM: TonB family protein; KEGG: pca:Pcar_0453 TonB-like protein; TonB family protein 377961 8736769 Acfer_0324 Acidaminococcus fermentans DSM 20731 TonB family protein YP_003398045.1 377191 D 591001 CDS YP_003398046.1 284047707 8736770 378044..378787 1 NC_013740.1 KEGG: bay:RBAM_036150 hypothetical protein; hypothetical protein 378787 8736770 Acfer_0325 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398046.1 378044 D 591001 CDS YP_003398047.1 284047708 8736771 378914..379996 1 NC_013740.1 PFAM: peptidase M48 Ste24p; KEGG: bpe:BP1463 putative lipoprotein; peptidase M48 Ste24p 379996 8736771 Acfer_0326 Acidaminococcus fermentans DSM 20731 peptidase M48 Ste24p YP_003398047.1 378914 D 591001 CDS YP_003398048.1 284047709 8736775 complement(385813..386838) 1 NC_013740.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: blj:BLD_1095 arsenite efflux pump; arsenical-resistance protein 386838 8736775 Acfer_0327 Acidaminococcus fermentans DSM 20731 arsenical-resistance protein YP_003398048.1 385813 R 591001 CDS YP_003398049.1 284047710 8736776 complement(386907..387227) 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: blj:BLD_1091 arsenical resistance operon repressor; ArsR family transcriptional regulator 387227 8736776 Acfer_0328 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003398049.1 386907 R 591001 CDS YP_003398050.1 284047711 8736777 387436..388773 1 NC_013740.1 PFAM: metallophosphoesterase; KEGG: mta:Moth_1160 metallophosphoesterase; metallophosphoesterase 388773 8736777 Acfer_0329 Acidaminococcus fermentans DSM 20731 metallophosphoesterase YP_003398050.1 387436 D 591001 CDS YP_003398051.1 284047712 8736778 388801..389121 1 NC_013740.1 PFAM: helix-turn-helix HxlR type; KEGG: cbt:CLH_2468 transcriptional regulator, HxlR family; HxlR family transcriptional regulator 389121 8736778 Acfer_0330 Acidaminococcus fermentans DSM 20731 HxlR family transcriptional regulator YP_003398051.1 388801 D 591001 CDS YP_003398052.1 284047713 8736779 complement(389161..389616) 1 NC_013740.1 PFAM: protein of unknown function DUF1486; KEGG: ccv:CCV52592_0353 putative pyruvate kinase; hypothetical protein 389616 8736779 Acfer_0331 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398052.1 389161 R 591001 CDS YP_003398053.1 284047714 8736780 389763..390653 1 NC_013740.1 KEGG: mmp:MMP0917 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase 390653 8736780 Acfer_0332 Acidaminococcus fermentans DSM 20731 diaminopimelate epimerase YP_003398053.1 389763 D 591001 CDS YP_003398054.1 284047715 8736781 390736..391935 1 NC_013740.1 TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II; KEGG: tel:tll2102 L,L-diaminopimelate aminotransferase; LL-diaminopimelate aminotransferase 391935 8736781 Acfer_0333 Acidaminococcus fermentans DSM 20731 LL-diaminopimelate aminotransferase YP_003398054.1 390736 D 591001 CDS YP_003398055.1 284047716 8736782 391959..392399 1 NC_013740.1 hypothetical protein 392399 8736782 Acfer_0334 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398055.1 391959 D 591001 CDS YP_003398056.1 284047717 8736783 complement(392442..393503) 1 NC_013740.1 PFAM: extracellular solute-binding protein family 1; KEGG: hmo:HM1_2279 spermidine/putrescine abc transporter, spermidine/putrescine-binding protein; extracellular solute-binding protein 393503 8736783 Acfer_0335 Acidaminococcus fermentans DSM 20731 extracellular solute-binding protein YP_003398056.1 392442 R 591001 CDS YP_003398057.1 284047718 8736784 complement(393510..394307) 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hmo:HM1_2278 spermidine/putrescine abc transporter, permease protein; binding-protein-dependent transport system inner membrane protein 394307 8736784 Acfer_0336 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003398057.1 393510 R 591001 CDS YP_003398058.1 284047719 8736785 complement(394288..395148) 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hmo:HM1_2277 spermidine/putrescine abc transporter, permease protein; binding-protein-dependent transport system inner membrane protein 395148 8736785 Acfer_0337 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003398058.1 394288 R 591001 CDS YP_003398059.1 284047720 8736786 complement(395145..396149) 1 NC_013740.1 KEGG: hmo:HM1_2276 spermidine/putrescine abc transporter, ATP-binding protein PotA; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 396149 8736786 Acfer_0338 Acidaminococcus fermentans DSM 20731 spermidine/putrescine ABC transporter ATPase YP_003398059.1 395145 R 591001 CDS YP_003398060.1 284047721 8736787 396407..396718 1 NC_013740.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: sth:STH429 50S ribosomal protein L21; 50S ribosomal protein L21 396718 8736787 Acfer_0339 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L21 YP_003398060.1 396407 D 591001 CDS YP_003398061.1 284047722 8736788 396722..397051 1 NC_013740.1 PFAM: protein of unknown function DUF464; KEGG: cpy:Cphy_2550 hypothetical protein; hypothetical protein 397051 8736788 Acfer_0340 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398061.1 396722 D 591001 CDS YP_003398062.1 284047723 8736789 397057..397347 1 NC_013740.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: ter:Tery_3242 50S ribosomal protein L27; 50S ribosomal protein L27 397347 8736789 Acfer_0341 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L27 YP_003398062.1 397057 D 591001 CDS YP_003398063.1 284047724 8736790 397408..397794 1 NC_013740.1 hypothetical protein 397794 8736790 Acfer_0342 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398063.1 397408 D 591001 CDS YP_003398064.1 284047725 8736791 398086..401820 1 NC_013740.1 KEGG: sth:STH3085 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta 401820 8736791 Acfer_0343 Acidaminococcus fermentans DSM 20731 DNA-directed RNA polymerase subunit beta YP_003398064.1 398086 D 591001 CDS YP_003398065.1 284047726 8736792 401837..405892 1 NC_013740.1 KEGG: mta:Moth_2467 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' 405892 8736792 Acfer_0344 Acidaminococcus fermentans DSM 20731 DNA-directed RNA polymerase subunit beta' YP_003398065.1 401837 D 591001 CDS YP_003398066.1 284047727 8736793 complement(405960..406589) 1 NC_013740.1 PFAM: NERD domain protein; NERD domain-containing protein 406589 8736793 Acfer_0345 Acidaminococcus fermentans DSM 20731 NERD domain-containing protein YP_003398066.1 405960 R 591001 CDS YP_003398067.1 284047728 8736794 406827..408371 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: oih:OB3284 aminobenzoyl-glutamate transporter; AbgT transporter 408371 8736794 Acfer_0346 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003398067.1 406827 D 591001 CDS YP_003398068.1 284047729 8736795 408939..410483 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: bcl:ABC3179 aminobenzoyl-glutamate transporter; AbgT transporter 410483 8736795 Acfer_0347 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003398068.1 408939 D 591001 CDS YP_003398069.1 284047730 8736796 410829..411665 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aoe:Clos_0523 ABC transporter related; ABC transporter 411665 8736796 Acfer_0348 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398069.1 410829 D 591001 CDS YP_003398070.1 284047731 8736797 411650..412513 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nth:Nther_0226 ABC transporter related; ABC transporter 412513 8736797 Acfer_0349 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398070.1 411650 D 591001 CDS YP_003398071.1 284047732 8736798 412507..413313 1 NC_013740.1 PFAM: cobalt transport protein; KEGG: ctc:CTC02574 cobalt transport protein CbiQ; cobalt transport protein 413313 8736798 Acfer_0350 Acidaminococcus fermentans DSM 20731 cobalt transport protein YP_003398071.1 412507 D 591001 CDS YP_003398072.1 284047733 8736799 413310..414047 1 NC_013740.1 KEGG: sat:SYN_01395 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 414047 8736799 Acfer_0351 Acidaminococcus fermentans DSM 20731 tRNA pseudouridine synthase A YP_003398072.1 413310 D 591001 CDS YP_003398073.1 284047734 8736800 414288..416231 1 NC_013740.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: cpc:Cpar_1184 TonB-dependent receptor; TonB-dependent receptor 416231 8736800 Acfer_0352 Acidaminococcus fermentans DSM 20731 TonB-dependent receptor YP_003398073.1 414288 D 591001 CDS YP_003398074.1 284047735 8736801 416653..417768 1 NC_013740.1 KEGG: dau:Daud_0623 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD 417768 8736801 Acfer_0353 Acidaminococcus fermentans DSM 20731 riboflavin biosynthesis protein RibD YP_003398074.1 416653 D 591001 CDS YP_003398075.1 284047736 8736802 417773..418411 1 NC_013740.1 KEGG: dae:Dtox_2299 riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 418411 8736802 Acfer_0354 Acidaminococcus fermentans DSM 20731 riboflavin synthase subunit alpha YP_003398075.1 417773 D 591001 CDS YP_003398076.1 284047737 8736803 418424..419650 1 NC_013740.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: chy:CHY_1473 3,4-dihydroxy-2-butanone 4- phosphate synthase/GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase 419650 8736803 Acfer_0355 Acidaminococcus fermentans DSM 20731 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_003398076.1 418424 D 591001 CDS YP_003398077.1 284047738 8736804 419647..420108 1 NC_013740.1 KEGG: ere:EUBREC_3129 riboflavin synthase beta chain (6,7-dimethyl-8-ribityllumazine synthase); TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 420108 8736804 Acfer_0356 Acidaminococcus fermentans DSM 20731 6,7-dimethyl-8-ribityllumazine synthase YP_003398077.1 419647 D 591001 CDS YP_003398078.1 284047739 8736805 420118..420978 1 NC_013740.1 PFAM: Hsp33 protein; KEGG: pjd:Pjdr2_0072 HSP33 protein; Hsp33 protein 420978 8736805 Acfer_0357 Acidaminococcus fermentans DSM 20731 Hsp33 protein YP_003398078.1 420118 D 591001 CDS YP_003398079.1 284047740 8736806 421038..422126 1 NC_013740.1 KEGG: dhd:Dhaf_3106 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase; recA protein 422126 8736806 Acfer_0358 Acidaminococcus fermentans DSM 20731 recA protein YP_003398079.1 421038 D 591001 CDS YP_003398080.1 284047741 8736807 422116..422613 1 NC_013740.1 PFAM: regulatory protein RecX; KEGG: rha:RHA1_ro06766 recombination regulator RecX; regulatory protein RecX 422613 8736807 Acfer_0359 Acidaminococcus fermentans DSM 20731 regulatory protein RecX YP_003398080.1 422116 D 591001 CDS YP_003398081.1 284047742 8736808 422854..424383 1 NC_013740.1 KEGG: bbe:BBR47_33940 2',3'-cyclic-nucleotide 2'- phosphodiesterase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; metal dependent phosphohydrolase 424383 8736808 Acfer_0360 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398081.1 422854 D 591001 CDS YP_003398082.1 284047743 8736809 complement(424518..425078) 1 NC_013740.1 PFAM: protein of unknown function DUF1393; KEGG: cbt:CLH_1589 hypothetical protein; hypothetical protein 425078 8736809 Acfer_0361 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398082.1 424518 R 591001 CDS YP_003398083.1 284047744 8736810 425247..425837 1 NC_013740.1 TIGRFAM: metal dependent phophohydrolase; KEGG: cbi:CLJ_B0707 HDIG domain protein; metal dependent phophohydrolase 425837 8736810 Acfer_0362 Acidaminococcus fermentans DSM 20731 metal dependent phophohydrolase YP_003398083.1 425247 D 591001 CDS YP_003398084.1 284047745 8736811 425928..426728 1 NC_013740.1 PFAM: purine or other phosphorylase family 1; KEGG: eca:ECA0185 uridine phosphorylase; purine or other phosphorylase family 1 426728 8736811 Acfer_0363 Acidaminococcus fermentans DSM 20731 purine or other phosphorylase family 1 YP_003398084.1 425928 D 591001 CDS YP_003398085.1 284047746 8736812 426725..427945 1 NC_013740.1 KEGG: sgl:SG0396 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: Phosphopentomutase domain protein; metalloenzyme domain protein; phosphopentomutase 427945 8736812 Acfer_0364 Acidaminococcus fermentans DSM 20731 phosphopentomutase YP_003398085.1 426725 D 591001 CDS YP_003398086.1 284047747 8736813 427947..428558 1 NC_013740.1 hypothetical protein 428558 8736813 Acfer_0365 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398086.1 427947 D 591001 CDS YP_003398087.1 284047748 8736814 428593..429378 1 NC_013740.1 PFAM: zinc/iron permease; KEGG: apv:Apar_0715 zinc/iron permease; zinc/iron permease 429378 8736814 Acfer_0366 Acidaminococcus fermentans DSM 20731 zinc/iron permease YP_003398087.1 428593 D 591001 CDS YP_003398088.1 284047749 8736815 429537..431174 1 NC_013740.1 TIGRFAM: hybrid cluster protein; PFAM: Prismane; KEGG: cbe:Cbei_0786 hydroxylamine reductase; hybrid cluster protein 431174 8736815 Acfer_0367 Acidaminococcus fermentans DSM 20731 hybrid cluster protein YP_003398088.1 429537 D 591001 CDS YP_003398089.1 284047750 8736816 431176..431337 1 NC_013740.1 hypothetical protein 431337 8736816 Acfer_0368 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398089.1 431176 D 591001 CDS YP_003398090.1 284047751 8736817 431356..431727 1 NC_013740.1 PFAM: protein of unknown function DUF488; KEGG: noc:Noc_2090 hypothetical protein; hypothetical protein 431727 8736817 Acfer_0369 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398090.1 431356 D 591001 CDS YP_003398091.1 284047752 8736818 complement(431757..432593) 1 NC_013740.1 KEGG: hne:HNE_0757 putative lipoprotein; putative lipoprotein 432593 8736818 Acfer_0370 Acidaminococcus fermentans DSM 20731 putative lipoprotein YP_003398091.1 431757 R 591001 CDS YP_003398092.1 284047753 8736819 complement(432583..433872) 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: cbf:CLI_2029 sodium:dicarboxylate symporter family protein; sodium:dicarboxylate symporter 433872 8736819 Acfer_0371 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003398092.1 432583 R 591001 CDS YP_003398093.1 284047754 8736820 434100..434897 1 NC_013740.1 KEGG: eca:ECA2246 hypothetical protein; hypothetical protein 434897 8736820 Acfer_0372 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398093.1 434100 D 591001 CDS YP_003398094.1 284047755 8736821 complement(434858..435811) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3865 LysR family transcriptional regulator; LysR family transcriptional regulator 435811 8736821 Acfer_0373 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398094.1 434858 R 591001 CDS YP_003398095.1 284047756 8736822 436619..437197 1 NC_013740.1 PFAM: BioY protein; KEGG: cdf:CD2971 putative biotin synthase; BioY protein 437197 8736822 Acfer_0374 Acidaminococcus fermentans DSM 20731 BioY protein YP_003398095.1 436619 D 591001 CDS YP_003398096.1 284047757 8736823 437199..438407 1 NC_013740.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cdf:CD2970 putative thiolase; acetyl-CoA acetyltransferase 438407 8736823 Acfer_0375 Acidaminococcus fermentans DSM 20731 acetyl-CoA acetyltransferase YP_003398096.1 437199 D 591001 CDS YP_003398097.1 284047758 8736824 438424..439740 1 NC_013740.1 PFAM: AMP-dependent synthetase and ligase; KEGG: cdf:CD2969 putative AMP-binding protein; AMP-dependent synthetase and ligase 439740 8736824 Acfer_0376 Acidaminococcus fermentans DSM 20731 AMP-dependent synthetase and ligase YP_003398097.1 438424 D 591001 CDS YP_003398098.1 284047759 8736825 439840..441240 1 NC_013740.1 KEGG: mac:MA2541 hypothetical protein; hypothetical protein 441240 8736825 Acfer_0377 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398098.1 439840 D 591001 CDS YP_003398099.1 284047760 8736826 441401..442042 1 NC_013740.1 KEGG: app:CAP2UW1_1314 hypothetical protein; hypothetical protein 442042 8736826 Acfer_0378 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398099.1 441401 D 591001 CDS YP_003398100.1 284047761 8736827 442039..442740 1 NC_013740.1 PFAM: protein of unknown function UPF0066; KEGG: amu:Amuc_0110 protein of unknown function UPF0066; hypothetical protein 442740 8736827 Acfer_0379 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398100.1 442039 D 591001 CDS YP_003398101.1 284047762 8736828 442935..453656 1 NC_013740.1 PFAM: Haemagluttinin domain protein; Hep_Hag repeat- containing protein; YadA domain protein; S-layer domain protein; KEGG: pmu:PM0714 Hsf; Hemagluttinin domain-containing protein 453656 8736828 Acfer_0380 Acidaminococcus fermentans DSM 20731 Hemagluttinin domain-containing protein YP_003398101.1 442935 D 591001 CDS YP_003398102.1 284047763 8736829 453963..454583 1 NC_013740.1 hypothetical protein 454583 8736829 Acfer_0381 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398102.1 453963 D 591001 CDS YP_003398103.1 284047764 8736830 454561..456021 1 NC_013740.1 PFAM: lipase class 3; KEGG: DAD1; DAD1 (DEFECTIVE ANTHER DEHISCENCE 1); triacylglycerol lipase; lipase class 3 456021 8736830 Acfer_0382 Acidaminococcus fermentans DSM 20731 lipase class 3 YP_003398103.1 454561 D 591001 CDS YP_003398104.1 284047765 8736831 456008..456901 1 NC_013740.1 PFAM: amidohydrolase 2; KEGG: bbe:BBR47_14510 hypothetical protein; amidohydrolase 2 456901 8736831 Acfer_0383 Acidaminococcus fermentans DSM 20731 amidohydrolase 2 YP_003398104.1 456008 D 591001 CDS YP_003398105.1 284047766 8736832 456898..457362 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: avi:Avi_5192 hypothetical protein; hypothetical protein 457362 8736832 Acfer_0384 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398105.1 456898 D 591001 CDS YP_003398106.1 284047767 8736833 457367..459304 1 NC_013740.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: efe:EFER_2240 colicin I receptor; TonB-dependent receptor 459304 8736833 Acfer_0385 Acidaminococcus fermentans DSM 20731 TonB-dependent receptor YP_003398106.1 457367 D 591001 CDS YP_003398107.1 284047768 8736836 460681..461286 1 NC_013740.1 KEGG: vvy:VVA0425 coproporphyrinogen III oxidase; coproporphyrinogen III oxidase 461286 8736836 Acfer_0388 Acidaminococcus fermentans DSM 20731 coproporphyrinogen III oxidase YP_003398107.1 460681 D 591001 CDS YP_003398108.1 284047769 8736843 462232..463230 1 NC_013740.1 PFAM: permease; KEGG: blj:BLD_1092 hypothetical permease; permease 463230 8736843 Acfer_0389 Acidaminococcus fermentans DSM 20731 permease YP_003398108.1 462232 D 591001 CDS YP_003398109.1 284047770 8736844 463243..463554 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: eel:EUBELI_20106 ArsR family transcriptional regulator; ArsR family transcriptional regulator 463554 8736844 Acfer_0390 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003398109.1 463243 D 591001 CDS YP_003398110.1 284047771 8736845 463581..463811 1 NC_013740.1 TIGRFAM: redox-active disulfide protein 2; KEGG: rsq:Rsph17025_1409 hypothetical protein; redox-active disulfide protein 2 463811 8736845 Acfer_0391 Acidaminococcus fermentans DSM 20731 redox-active disulfide protein 2 YP_003398110.1 463581 D 591001 CDS YP_003398111.1 284047772 8736847 464660..465193 1 NC_013740.1 PFAM: Helix-turn-helix type 11 domain protein; 3H domain protein; KEGG: ere:EUBREC_1036 hypothetical protein; helix-turn-helix type 11 domain-containing protein 465193 8736847 Acfer_0393 Acidaminococcus fermentans DSM 20731 helix-turn-helix type 11 domain-containing protein YP_003398111.1 464660 D 591001 CDS YP_003398112.1 284047773 8736848 465331..465801 1 NC_013740.1 PFAM: protein of unknown function DUF805; KEGG: mag:amb4251 hypothetical protein; hypothetical protein 465801 8736848 Acfer_0394 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398112.1 465331 D 591001 CDS YP_003398113.1 284047774 8736849 466069..466986 1 NC_013740.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: ere:EUBREC_2278 putative nitric-oxide reductase; ATPase 466986 8736849 Acfer_0395 Acidaminococcus fermentans DSM 20731 ATPase YP_003398113.1 466069 D 591001 CDS YP_003398114.1 284047775 8736850 466993..468717 1 NC_013740.1 SMART: von Willebrand factor A; KEGG: ere:EUBREC_2277 hypothetical protein; von Willebrand factor A 468717 8736850 Acfer_0396 Acidaminococcus fermentans DSM 20731 von Willebrand factor A YP_003398114.1 466993 D 591001 CDS YP_003398115.1 284047776 8736851 469185..471839 1 NC_013740.1 TIGRFAM: valyl-tRNA synthetase; KEGG: drm:Dred_2554 valyl-tRNA synthetase; valyl-tRNA synthetase 471839 8736851 Acfer_0397 Acidaminococcus fermentans DSM 20731 valyl-tRNA synthetase YP_003398115.1 469185 D 591001 CDS YP_003398116.1 284047777 8736852 471858..473138 1 NC_013740.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: drm:Dred_2552 FolC bifunctional protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 473138 8736852 Acfer_0398 Acidaminococcus fermentans DSM 20731 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_003398116.1 471858 D 591001 CDS YP_003398117.1 284047778 8736853 473143..474414 1 NC_013740.1 PFAM: O-antigen polymerase; KEGG: dae:Dtox_4116 O-antigen polymerase; O-antigen polymerase 474414 8736853 Acfer_0399 Acidaminococcus fermentans DSM 20731 O-antigen polymerase YP_003398117.1 473143 D 591001 CDS YP_003398118.1 284047779 8736854 474586..475812 1 NC_013740.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cpe:CPE0068 glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 475812 8736854 Acfer_0400 Acidaminococcus fermentans DSM 20731 glucose-1-phosphate adenylyltransferase YP_003398118.1 474586 D 591001 CDS YP_003398119.1 284047780 8736855 475805..476917 1 NC_013740.1 KEGG: drm:Dred_1456 glucose-1-phosphate adenylyltransferase, GlgD subunit; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase, GlgD subunit 476917 8736855 Acfer_0401 Acidaminococcus fermentans DSM 20731 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_003398119.1 475805 D 591001 CDS YP_003398120.1 284047781 8736856 476951..479368 1 NC_013740.1 KEGG: gtn:GTNG_2778 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 479368 8736856 Acfer_0402 Acidaminococcus fermentans DSM 20731 glycogen/starch/alpha-glucan phosphorylase YP_003398120.1 476951 D 591001 CDS YP_003398121.1 284047782 8736857 479417..481408 1 NC_013740.1 KEGG: hor:Hore_06930 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein 481408 8736857 Acfer_0403 Acidaminococcus fermentans DSM 20731 1,4-alpha-glucan-branching protein YP_003398121.1 479417 D 591001 CDS YP_003398122.1 284047783 8736858 481383..483014 1 NC_013740.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain protein; glycosyl transferase group 1; KEGG: gtn:GTNG_2779 glycogen synthase; glycogen/starch synthase 483014 8736858 Acfer_0404 Acidaminococcus fermentans DSM 20731 glycogen/starch synthase YP_003398122.1 481383 D 591001 CDS YP_003398123.1 284047784 8736859 483057..486419 1 NC_013740.1 KEGG: nth:Nther_0557 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; 4-alpha-glucanotransferase 486419 8736859 Acfer_0405 Acidaminococcus fermentans DSM 20731 4-alpha-glucanotransferase YP_003398123.1 483057 D 591001 CDS YP_003398124.1 284047785 8736860 complement(486477..487811) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter; citrate transporter 487811 8736860 Acfer_0406 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003398124.1 486477 R 591001 CDS YP_003398125.1 284047786 8736861 complement(488205..489539) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter; citrate transporter 489539 8736861 Acfer_0407 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003398125.1 488205 R 591001 CDS YP_003398126.1 284047787 8736862 complement(489843..491405) 1 NC_013740.1 KEGG: sub:SUB1586 citrate lyase alpha subunit; TIGRFAM: citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; citrate lyase subunit alpha 491405 8736862 Acfer_0408 Acidaminococcus fermentans DSM 20731 citrate lyase subunit alpha YP_003398126.1 489843 R 591001 CDS YP_003398127.1 284047788 8736863 complement(491407..492318) 1 NC_013740.1 PFAM: HpcH/HpaI aldolase; KEGG: fnu:FN1379 citrate lyase beta chain; Citrate (pro-3S)-lyase 492318 8736863 Acfer_0409 Acidaminococcus fermentans DSM 20731 Citrate (pro-3S)-lyase YP_003398127.1 491407 R 591001 CDS YP_003398128.1 284047789 8736864 complement(492320..492619) 1 NC_013740.1 TIGRFAM: citrate lyase acyl carrier protein; PFAM: Citrate lyase acyl carrier protein CitD; KEGG: ooe:OEOE_0421 citrate lyase subunit gamma; citrate lyase acyl carrier protein 492619 8736864 Acfer_0410 Acidaminococcus fermentans DSM 20731 citrate lyase acyl carrier protein YP_003398128.1 492320 R 591001 CDS YP_003398129.1 284047790 8736865 492861..493772 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator; LysR family transcriptional regulator 493772 8736865 Acfer_0411 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398129.1 492861 D 591001 CDS YP_003398130.1 284047791 8736866 493781..495169 1 NC_013740.1 KEGG: asu:Asuc_1198 holo-ACP synthase, triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: holo-ACP synthase CitX; PFAM: triphosphoribosyl-dephospho-CoA protein; Apo- citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 495169 8736866 Acfer_0412 Acidaminococcus fermentans DSM 20731 holo-ACP synthase CitX YP_003398130.1 493781 D 591001 CDS YP_003398131.1 284047792 8736867 495626..497104 1 NC_013740.1 PFAM: Uncharacterised protein family UPF0324; KEGG: drm:Dred_1452 hypothetical protein; hypothetical protein 497104 8736867 Acfer_0413 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398131.1 495626 D 591001 CDS YP_003398132.1 284047793 8736868 497151..497372 1 NC_013740.1 KEGG: tye:THEYE_A0243 hypothetical protein; hypothetical protein 497372 8736868 Acfer_0414 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398132.1 497151 D 591001 CDS YP_003398133.1 284047794 8736869 complement(497411..498295) 1 NC_013740.1 KEGG: tde:TDE1506 L-serine dehydratase, iron-sulfur- dependent, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, alpha subunit; PFAM: serine dehydratase alpha chain; L-serine dehydratase, iron-sulfur-dependent subunit alpha 498295 8736869 Acfer_0415 Acidaminococcus fermentans DSM 20731 L-serine dehydratase, iron-sulfur-dependent subunit alpha YP_003398133.1 497411 R 591001 CDS YP_003398134.1 284047795 8736870 complement(498307..498972) 1 NC_013740.1 KEGG: tde:TDE1507 L-serine dehydratase, iron-sulfur- dependent, beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur- dependent, beta subunit; PFAM: serine dehydratase beta chain; L-serine dehydratase, iron-sulfur-dependent subunit beta 498972 8736870 Acfer_0416 Acidaminococcus fermentans DSM 20731 L-serine dehydratase, iron-sulfur-dependent subunit beta YP_003398134.1 498307 R 591001 CDS YP_003398135.1 284047796 8736871 complement(499183..500373) 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: bhy:BHWA1_00557 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 500373 8736871 Acfer_0417 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003398135.1 499183 R 591001 CDS YP_003398136.1 284047797 8736872 500540..501499 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cpy:Cphy_2156 LysR family transcriptional regulator; LysR family transcriptional regulator 501499 8736872 Acfer_0418 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398136.1 500540 D 591001 CDS YP_003398137.1 284047798 8736873 501558..501764 1 NC_013740.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: cha:CHAB381_0223 50S ribosomal protein L31; 50S ribosomal protein L31 501764 8736873 Acfer_0419 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L31 YP_003398137.1 501558 D 591001 CDS YP_003398138.1 284047799 8736874 501837..502721 1 NC_013740.1 PFAM: protein of unknown function DUF1385; KEGG: hor:Hore_17980 predicted metal-dependent enzyme; hypothetical protein 502721 8736874 Acfer_0420 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398138.1 501837 D 591001 CDS YP_003398139.1 284047800 8736875 502734..503810 1 NC_013740.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: chy:CHY_2563 peptide chain release factor 1; peptide chain release factor 1 503810 8736875 Acfer_0421 Acidaminococcus fermentans DSM 20731 peptide chain release factor 1 YP_003398139.1 502734 D 591001 CDS YP_003398140.1 284047801 8736876 503812..504720 1 NC_013740.1 KEGG: mxa:MXAN_4908 putative protein methyltransferase HemK; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase 504720 8736876 Acfer_0422 Acidaminococcus fermentans DSM 20731 protein-(glutamine-N5) methyltransferase YP_003398140.1 503812 D 591001 CDS YP_003398141.1 284047802 8736877 504686..505792 1 NC_013740.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: bcg:BCG9842_B5504 SUA5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein 505792 8736877 Acfer_0423 Acidaminococcus fermentans DSM 20731 Sua5/YciO/YrdC/YwlC family protein YP_003398141.1 504686 D 591001 CDS YP_003398142.1 284047803 8736878 505860..506297 1 NC_013740.1 KEGG: cdf:CD2320 ribose-5-phosphate isomerase 1; TIGRFAM: ribose 5-phosphate isomerase B; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase B 506297 8736878 Acfer_0424 Acidaminococcus fermentans DSM 20731 ribose 5-phosphate isomerase B YP_003398142.1 505860 D 591001 CDS YP_003398143.1 284047804 8736879 506307..506849 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: cpy:Cphy_3000 hypothetical protein; hypothetical protein 506849 8736879 Acfer_0425 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398143.1 506307 D 591001 CDS YP_003398144.1 284047805 8736880 506903..508150 1 NC_013740.1 PFAM: glycine hydroxymethyltransferase; KEGG: chy:CHY_2557 serine hydroxymethyltransferase; glycine hydroxymethyltransferase 508150 8736880 Acfer_0426 Acidaminococcus fermentans DSM 20731 glycine hydroxymethyltransferase YP_003398144.1 506903 D 591001 CDS YP_003398145.1 284047806 8736881 508173..508799 1 NC_013740.1 KEGG: hor:Hore_17920 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 508799 8736881 Acfer_0427 Acidaminococcus fermentans DSM 20731 uracil phosphoribosyltransferase YP_003398145.1 508173 D 591001 CDS YP_003398146.1 284047807 8736882 508803..509255 1 NC_013740.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: chy:CHY_2556 putative ComE operon protein 2; CMP/dCMP deaminase zinc-binding protein 509255 8736882 Acfer_0428 Acidaminococcus fermentans DSM 20731 CMP/dCMP deaminase zinc-binding protein YP_003398146.1 508803 D 591001 CDS YP_003398147.1 284047808 8736883 complement(509307..510179) 1 NC_013740.1 KEGG: ere:EUBREC_1080 flagellin lysine-N-methylase; hypothetical protein 510179 8736883 Acfer_0429 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398147.1 509307 R 591001 CDS YP_003398148.1 284047809 8736884 510338..511318 1 NC_013740.1 hypothetical protein 511318 8736884 Acfer_0430 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398148.1 510338 D 591001 CDS YP_003398149.1 284047810 8736885 511402..511968 1 NC_013740.1 PFAM: Chorismate mutase, type II; KEGG: cli:Clim_2513 chorismate mutase; chorismate mutase 511968 8736885 Acfer_0431 Acidaminococcus fermentans DSM 20731 chorismate mutase YP_003398149.1 511402 D 591001 CDS YP_003398150.1 284047811 8736886 511978..513435 1 NC_013740.1 PFAM: sodium/sulphate symporter; KEGG: lcb:LCABL_04300 sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter); sodium/sulfate symporter 513435 8736886 Acfer_0432 Acidaminococcus fermentans DSM 20731 sodium/sulfate symporter YP_003398150.1 511978 D 591001 CDS YP_003398151.1 284047812 8736887 513563..514384 1 NC_013740.1 KEGG: sca:Sca_2326 hypothetical protein; hypothetical protein 514384 8736887 Acfer_0433 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398151.1 513563 D 591001 CDS YP_003398152.1 284047813 8736888 514482..514832 1 NC_013740.1 hypothetical protein 514832 8736888 Acfer_0434 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398152.1 514482 D 591001 CDS YP_003398153.1 284047814 8736889 514893..515336 1 NC_013740.1 PFAM: UspA domain protein; KEGG: bsu:BSU39250 phosphate starvation protein (universal stress protein A family); UspA domain-containing protein 515336 8736889 Acfer_0435 Acidaminococcus fermentans DSM 20731 UspA domain-containing protein YP_003398153.1 514893 D 591001 CDS YP_003398154.1 284047815 8736890 515351..515794 1 NC_013740.1 PFAM: UspA domain protein; KEGG: cma:Cmaq_1851 UspA domain-containing protein; UspA domain-containing protein 515794 8736890 Acfer_0436 Acidaminococcus fermentans DSM 20731 UspA domain-containing protein YP_003398154.1 515351 D 591001 CDS YP_003398155.1 284047816 8736891 515808..516245 1 NC_013740.1 PFAM: UspA domain protein; KEGG: bsu:BSU39250 phosphate starvation protein (universal stress protein A family); UspA domain-containing protein 516245 8736891 Acfer_0437 Acidaminococcus fermentans DSM 20731 UspA domain-containing protein YP_003398155.1 515808 D 591001 CDS YP_003398156.1 284047817 8736892 516384..516821 1 NC_013740.1 PFAM: UspA domain protein; KEGG: cma:Cmaq_1851 UspA domain-containing protein; UspA domain-containing protein 516821 8736892 Acfer_0438 Acidaminococcus fermentans DSM 20731 UspA domain-containing protein YP_003398156.1 516384 D 591001 CDS YP_003398157.1 284047818 8736893 516856..517290 1 NC_013740.1 PFAM: UspA domain protein; KEGG: mse:Msed_1589 UspA domain-containing protein; UspA domain-containing protein 517290 8736893 Acfer_0439 Acidaminococcus fermentans DSM 20731 UspA domain-containing protein YP_003398157.1 516856 D 591001 CDS YP_003398158.1 284047819 8736894 complement(517376..518914) 1 NC_013740.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: drm:Dred_1645 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC-like protein 518914 8736894 Acfer_0440 Acidaminococcus fermentans DSM 20731 Na+/H+ antiporter NhaC-like protein YP_003398158.1 517376 R 591001 CDS YP_003398159.1 284047820 8736895 519074..520600 1 NC_013740.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: Amino acid carrier protein alsT, putative; amino acid carrier protein 520600 8736895 Acfer_0441 Acidaminococcus fermentans DSM 20731 amino acid carrier protein YP_003398159.1 519074 D 591001 CDS YP_003398160.1 284047821 8736896 complement(520654..521847) 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: mmx:MmarC6_0851 GntR family transcriptional regulator; GntR family transcriptional regulator 521847 8736896 Acfer_0442 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003398160.1 520654 R 591001 CDS YP_003398161.1 284047822 8736897 522144..524762 1 NC_013740.1 KEGG: gwc:GWCH70_2673 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; DNA-directed DNA polymerase; DNA polymerase I 524762 8736897 Acfer_0443 Acidaminococcus fermentans DSM 20731 DNA polymerase I YP_003398161.1 522144 D 591001 CDS YP_003398162.1 284047823 8736898 524773..525594 1 NC_013740.1 KEGG: chy:CHY_1649 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA- binding; zinc finger Fpg domain protein; formamidopyrimidine-DNA glycosylase 525594 8736898 Acfer_0444 Acidaminococcus fermentans DSM 20731 formamidopyrimidine-DNA glycosylase YP_003398162.1 524773 D 591001 CDS YP_003398163.1 284047824 8736899 525605..526192 1 NC_013740.1 TIGRFAM: dephospho-CoA kinase; KEGG: sth:STH851 dephospho-CoA kinase; dephospho-CoA kinase 526192 8736899 Acfer_0445 Acidaminococcus fermentans DSM 20731 dephospho-CoA kinase YP_003398163.1 525605 D 591001 CDS YP_003398164.1 284047825 8736900 526330..526929 1 NC_013740.1 PFAM: Lytic transglycosylase catalytic; KEGG: hmo:HM1_1753 soluble lytic murein transglycosylase; Lytic transglycosylase catalytic 526929 8736900 Acfer_0446 Acidaminococcus fermentans DSM 20731 Lytic transglycosylase catalytic YP_003398164.1 526330 D 591001 CDS YP_003398165.1 284047826 8736904 complement(527594..528586) 1 NC_013740.1 KEGG: ere:EUBREC_1720 hypothetical protein; hypothetical protein 528586 8736904 Acfer_0447 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398165.1 527594 R 591001 CDS YP_003398166.1 284047827 8736905 528765..530165 1 NC_013740.1 PFAM: gluconate transporter; KEGG: cpy:Cphy_2104 gluconate transporter; gluconate transporter 530165 8736905 Acfer_0448 Acidaminococcus fermentans DSM 20731 gluconate transporter YP_003398166.1 528765 D 591001 CDS YP_003398167.1 284047828 8736906 530524..531261 1 NC_013740.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ckr:CKR_0744 hypothetical protein; FeS assembly ATPase SufC 531261 8736906 Acfer_0449 Acidaminococcus fermentans DSM 20731 FeS assembly ATPase SufC YP_003398167.1 530524 D 591001 CDS YP_003398168.1 284047829 8736907 531278..532744 1 NC_013740.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: cac:CAC3289 iron-regulated ABC-type transporter membrane component (SufB); FeS assembly protein SufB 532744 8736907 Acfer_0450 Acidaminococcus fermentans DSM 20731 FeS assembly protein SufB YP_003398168.1 531278 D 591001 CDS YP_003398169.1 284047830 8736908 532761..533885 1 NC_013740.1 PFAM: SufBD protein; KEGG: cbe:Cbei_1850 FeS assembly protein SufD; SufBD protein 533885 8736908 Acfer_0451 Acidaminococcus fermentans DSM 20731 SufBD protein YP_003398169.1 532761 D 591001 CDS YP_003398170.1 284047831 8736909 533848..535068 1 NC_013740.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: ckr:CKR_0747 hypothetical protein; SufS subfamily cysteine desulfurase 535068 8736909 Acfer_0452 Acidaminococcus fermentans DSM 20731 SufS subfamily cysteine desulfurase YP_003398170.1 533848 D 591001 CDS YP_003398171.1 284047832 8736910 535092..535532 1 NC_013740.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: cac:CAC3292 NifU homolog involved in Fe-S cluster formation; NifU family SUF system FeS assembly protein 535532 8736910 Acfer_0453 Acidaminococcus fermentans DSM 20731 NifU family SUF system FeS assembly protein YP_003398171.1 535092 D 591001 CDS YP_003398172.1 284047833 8736911 535883..537955 1 NC_013740.1 KEGG: hmo:HM1_2322 polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; RNA binding S1 domain protein; SMART: KH domain protein; polyribonucleotide nucleotidyltransferase 537955 8736911 Acfer_0454 Acidaminococcus fermentans DSM 20731 polyribonucleotide nucleotidyltransferase YP_003398172.1 535883 D 591001 CDS YP_003398173.1 284047834 8736912 538090..538572 1 NC_013740.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: bbe:BBR47_00410 PTS system IIA component; PTS system glucose subfamily transporter subunit IIA 538572 8736912 Acfer_0455 Acidaminococcus fermentans DSM 20731 PTS system glucose subfamily transporter subunit IIA YP_003398173.1 538090 D 591001 CDS YP_003398174.1 284047835 8736913 538589..539020 1 NC_013740.1 hypothetical protein 539020 8736913 Acfer_0456 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398174.1 538589 D 591001 CDS YP_003398175.1 284047836 8736914 complement(539074..539265) 1 NC_013740.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: aoe:Clos_1438 ribosomal protein L28; 50S ribosomal protein L28 539265 8736914 Acfer_0457 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L28 YP_003398175.1 539074 R 591001 CDS YP_003398176.1 284047837 8736915 539385..541448 1 NC_013740.1 KEGG: sth:STH1384 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG 541448 8736915 Acfer_0458 Acidaminococcus fermentans DSM 20731 ATP-dependent DNA helicase RecG YP_003398176.1 539385 D 591001 CDS YP_003398177.1 284047838 8736916 541660..543732 1 NC_013740.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; KEGG: mta:Moth_1142 elongation factor G; translation elongation factor G 543732 8736916 Acfer_0459 Acidaminococcus fermentans DSM 20731 translation elongation factor G YP_003398177.1 541660 D 591001 CDS YP_003398178.1 284047839 8736917 544000..544908 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ypb:YPTS_1473 hypothetical protein; hypothetical protein 544908 8736917 Acfer_0460 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398178.1 544000 D 591001 CDS YP_003398179.1 284047840 8736918 545024..547012 1 NC_013740.1 KEGG: pmx:PERMA_1704 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; transketolase 547012 8736918 Acfer_0461 Acidaminococcus fermentans DSM 20731 transketolase YP_003398179.1 545024 D 591001 CDS YP_003398180.1 284047841 8736919 547074..547898 1 NC_013740.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: esi:Exig_0540 phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 547898 8736919 Acfer_0462 Acidaminococcus fermentans DSM 20731 phosphomethylpyrimidine kinase YP_003398180.1 547074 D 591001 CDS YP_003398181.1 284047842 8736920 547895..548527 1 NC_013740.1 KEGG: cac:CAC0495 thiamine monophosphate syntase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 548527 8736920 Acfer_0463 Acidaminococcus fermentans DSM 20731 thiamine-phosphate pyrophosphorylase YP_003398181.1 547895 D 591001 CDS YP_003398182.1 284047843 8736921 548540..548941 1 NC_013740.1 hypothetical protein 548941 8736921 Acfer_0464 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398182.1 548540 D 591001 CDS YP_003398183.1 284047844 8736922 549016..549381 1 NC_013740.1 PFAM: putative helix-turn-helix protein YlxM/p13 family protein; KEGG: ljo:LJ1517 hypothetical protein; putative helix-turn-helix protein YlxM/p13 family protein 549381 8736922 Acfer_0465 Acidaminococcus fermentans DSM 20731 putative helix-turn-helix protein YlxM/p13 family protein YP_003398183.1 549016 D 591001 CDS YP_003398184.1 284047845 8736923 549384..550730 1 NC_013740.1 KEGG: gwc:GWCH70_1087 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; signal recognition particle protein 550730 8736923 Acfer_0466 Acidaminococcus fermentans DSM 20731 signal recognition particle protein YP_003398184.1 549384 D 591001 CDS YP_003398185.1 284047846 8736924 550758..551030 1 NC_013740.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: lsp:Bsph_1527 30S ribosomal protein S16; 30S ribosomal protein S16 551030 8736924 Acfer_0467 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S16 YP_003398185.1 550758 D 591001 CDS YP_003398186.1 284047847 8736925 551042..551269 1 NC_013740.1 KEGG: ckr:CKR_1299 hypothetical protein; hypothetical protein 551269 8736925 Acfer_0468 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398186.1 551042 D 591001 CDS YP_003398187.1 284047848 8736926 551281..551688 1 NC_013740.1 KEGG: sth:STH1468 hypothetical protein; hypothetical protein 551688 8736926 Acfer_0469 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398187.1 551281 D 591001 CDS YP_003398188.1 284047849 8736927 551693..552187 1 NC_013740.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: bcb:BCB4264_A3941 16S rRNA-processing protein RimM; 16S rRNA processing protein RimM 552187 8736927 Acfer_0470 Acidaminococcus fermentans DSM 20731 16S rRNA processing protein RimM YP_003398188.1 551693 D 591001 CDS YP_003398189.1 284047850 8736928 552189..552950 1 NC_013740.1 KEGG: afw:Anae109_1944 tRNA (guanine-N1)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 552950 8736928 Acfer_0471 Acidaminococcus fermentans DSM 20731 tRNA (guanine-N1)-methyltransferase YP_003398189.1 552189 D 591001 CDS YP_003398190.1 284047851 8736929 553081..553422 1 NC_013740.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: pjd:Pjdr2_3477 ribosomal protein L19; 50S ribosomal protein L19 553422 8736929 Acfer_0472 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L19 YP_003398190.1 553081 D 591001 CDS YP_003398191.1 284047852 8736930 553484..554023 1 NC_013740.1 KEGG: cbi:CLJ_B2668 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; signal peptidase I 554023 8736930 Acfer_0473 Acidaminococcus fermentans DSM 20731 signal peptidase I YP_003398191.1 553484 D 591001 CDS YP_003398192.1 284047853 8736931 554252..555139 1 NC_013740.1 TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related; KEGG: bha:BH2476 hypothetical protein; ribosome biogenesis GTP-binding protein YlqF 555139 8736931 Acfer_0474 Acidaminococcus fermentans DSM 20731 ribosome biogenesis GTP-binding protein YlqF YP_003398192.1 554252 D 591001 CDS YP_003398193.1 284047854 8736932 555142..555954 1 NC_013740.1 PFAM: ribonuclease HII/HIII; KEGG: dsy:DSY2589 hypothetical protein; Ribonuclease H 555954 8736932 Acfer_0475 Acidaminococcus fermentans DSM 20731 Ribonuclease H YP_003398193.1 555142 D 591001 CDS YP_003398194.1 284047855 8736933 556042..556398 1 NC_013740.1 PFAM: protein of unknown function UPF0102; KEGG: hor:Hore_07400 conserved hypothetical protein TIGR00252; hypothetical protein 556398 8736933 Acfer_0476 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398194.1 556042 D 591001 CDS YP_003398195.1 284047856 8736934 556577..558100 1 NC_013740.1 KEGG: pth:PTH_1690 ATPase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; Mg chelatase subunit ChlI 558100 8736934 Acfer_0477 Acidaminococcus fermentans DSM 20731 Mg chelatase subunit ChlI YP_003398195.1 556577 D 591001 CDS YP_003398196.1 284047857 8736935 558111..560429 1 NC_013740.1 PFAM: peptidase A24A domain protein; Fimbrial assembly family protein; KEGG: cpo:COPRO5265_1030 leader peptidase PilD; peptidase A24A domain-containing protein 560429 8736935 Acfer_0478 Acidaminococcus fermentans DSM 20731 peptidase A24A domain-containing protein YP_003398196.1 558111 D 591001 CDS YP_003398197.1 284047858 8736936 560422..560985 1 NC_013740.1 hypothetical protein 560985 8736936 Acfer_0479 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398197.1 560422 D 591001 CDS YP_003398198.1 284047859 8736937 561077..562333 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: cdf:CD2382 putative aspartate aminotransferase; class I and II aminotransferase 562333 8736937 Acfer_0480 Acidaminococcus fermentans DSM 20731 class I and II aminotransferase YP_003398198.1 561077 D 591001 CDS YP_003398199.1 284047860 8736938 562358..564019 1 NC_013740.1 KEGG: ctc:CTC00344 uridine kinase; uridine kinase 564019 8736938 Acfer_0481 Acidaminococcus fermentans DSM 20731 uridine kinase YP_003398199.1 562358 D 591001 CDS YP_003398200.1 284047861 8736939 564035..565225 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: amt:Amet_2618 aspartate aminotransferase; class I and II aminotransferase 565225 8736939 Acfer_0482 Acidaminococcus fermentans DSM 20731 class I and II aminotransferase YP_003398200.1 564035 D 591001 CDS YP_003398201.1 284047862 8736940 565400..566653 1 NC_013740.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: bcy:Bcer98_1792 DEAD/DEAH box helicase domain- containing protein; DEAD/DEAH box helicase 566653 8736940 Acfer_0483 Acidaminococcus fermentans DSM 20731 DEAD/DEAH box helicase YP_003398201.1 565400 D 591001 CDS YP_003398202.1 284047863 8736941 566682..568148 1 NC_013740.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: tte:TTE0929 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 568148 8736941 Acfer_0484 Acidaminococcus fermentans DSM 20731 glutamyl-tRNA synthetase YP_003398202.1 566682 D 591001 CDS YP_003398203.1 284047864 8736942 568153..569052 1 NC_013740.1 PFAM: ROK family protein; KEGG: cdf:CD2236 putative glucokinase; ROK family protein 569052 8736942 Acfer_0485 Acidaminococcus fermentans DSM 20731 ROK family protein YP_003398203.1 568153 D 591001 CDS YP_003398204.1 284047865 8736943 569180..569617 1 NC_013740.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: sth:STH3041 50S ribosomal protein L13; 50S ribosomal protein L13 569617 8736943 Acfer_0486 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L13 YP_003398204.1 569180 D 591001 CDS YP_003398205.1 284047866 8736944 569638..570030 1 NC_013740.1 PFAM: ribosomal protein S9; KEGG: cth:Cthe_1782 30S ribosomal protein S9; 30S ribosomal protein S9 570030 8736944 Acfer_0487 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S9 YP_003398205.1 569638 D 591001 CDS YP_003398206.1 284047867 8736945 complement(570200..571507) 1 NC_013740.1 TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; KEGG: tte:TTE1565 thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 571507 8736945 Acfer_0488 Acidaminococcus fermentans DSM 20731 thiamine biosynthesis protein ThiC YP_003398206.1 570200 R 591001 CDS YP_003398207.1 284047868 8736946 571879..575394 1 NC_013740.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cby:CLM_3126 pyruvate ferredoxin oxidoreductase; pyruvate ferredoxin/flavodoxin oxidoreductase 575394 8736946 Acfer_0489 Acidaminococcus fermentans DSM 20731 pyruvate ferredoxin/flavodoxin oxidoreductase YP_003398207.1 571879 D 591001 CDS YP_003398208.1 284047869 8736947 575580..577184 1 NC_013740.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: cno:NT01CX_1154 Na/Pi cotransporter family protein; Na/Pi-cotransporter II-like protein 577184 8736947 Acfer_0490 Acidaminococcus fermentans DSM 20731 Na/Pi-cotransporter II-like protein YP_003398208.1 575580 D 591001 CDS YP_003398209.1 284047870 8736948 577378..577917 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: apa:APP7_2051 hypothetical protein; hypothetical protein 577917 8736948 Acfer_0491 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398209.1 577378 D 591001 CDS YP_003398210.1 284047871 8736950 578318..579067 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: nmi:NMO_1519 beta 1,4 glucosyltransferase; family 2 glycosyl transferase 579067 8736950 Acfer_0492 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398210.1 578318 D 591001 CDS YP_003398211.1 284047872 8736951 579102..580031 1 NC_013740.1 PFAM: glycosyl transferase family 8; KEGG: bld:BLi04064 GspA; glycosyl transferase family protein 580031 8736951 Acfer_0493 Acidaminococcus fermentans DSM 20731 glycosyl transferase family protein YP_003398211.1 579102 D 591001 CDS YP_003398212.1 284047873 8736952 580053..581252 1 NC_013740.1 PFAM: O-antigen polymerase; KEGG: hor:Hore_18850 O-antigen polymerase; O-antigen polymerase 581252 8736952 Acfer_0494 Acidaminococcus fermentans DSM 20731 O-antigen polymerase YP_003398212.1 580053 D 591001 CDS YP_003398213.1 284047874 8736953 581298..582230 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: cbe:Cbei_4632 glycosyl transferase family protein; family 2 glycosyl transferase 582230 8736953 Acfer_0495 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398213.1 581298 D 591001 CDS YP_003398214.1 284047875 8736954 582236..583228 1 NC_013740.1 PFAM: glycosyl transferase family 8; KEGG: reu:Reut_A2558 glycosyl transferase family protein; glycosyl transferase family protein 583228 8736954 Acfer_0496 Acidaminococcus fermentans DSM 20731 glycosyl transferase family protein YP_003398214.1 582236 D 591001 CDS YP_003398215.1 284047876 8736955 583442..584698 1 NC_013740.1 PFAM: AAA-4 family protein; KEGG: dhd:Dhaf_4703 putative transcriptional regulator; putative transcriptional regulator 584698 8736955 Acfer_0497 Acidaminococcus fermentans DSM 20731 putative transcriptional regulator YP_003398215.1 583442 D 591001 CDS YP_003398216.1 284047877 8736956 584717..586744 1 NC_013740.1 PFAM: sulfatase; KEGG: hhe:HH1674 hypothetical protein; sulfatase 586744 8736956 Acfer_0498 Acidaminococcus fermentans DSM 20731 sulfatase YP_003398216.1 584717 D 591001 CDS YP_003398217.1 284047878 8736957 586841..588007 1 NC_013740.1 KEGG: sbo:SBO_0857 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 588007 8736957 Acfer_0499 Acidaminococcus fermentans DSM 20731 nucleotide sugar dehydrogenase YP_003398217.1 586841 D 591001 CDS YP_003398218.1 284047879 8736958 588017..589015 1 NC_013740.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mla:Mlab_0897 hypothetical protein; NAD-dependent epimerase/dehydratase 589015 8736958 Acfer_0500 Acidaminococcus fermentans DSM 20731 NAD-dependent epimerase/dehydratase YP_003398218.1 588017 D 591001 CDS YP_003398219.1 284047880 8736959 589162..589989 1 NC_013740.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: tro:trd_A0511 hydrolase, carbon-nitrogen family protein; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 589989 8736959 Acfer_0501 Acidaminococcus fermentans DSM 20731 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003398219.1 589162 D 591001 CDS YP_003398220.1 284047881 8736960 590146..591552 1 NC_013740.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: apr:Apre_0099 amino acid carrier protein; amino acid carrier protein 591552 8736960 Acfer_0502 Acidaminococcus fermentans DSM 20731 amino acid carrier protein YP_003398220.1 590146 D 591001 CDS YP_003398221.1 284047882 8736961 591743..593059 1 NC_013740.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; peptidylprolyl isomerase FKBP-type; trigger factor domain protein; KEGG: hor:Hore_14950 trigger factor; trigger factor 593059 8736961 Acfer_0503 Acidaminococcus fermentans DSM 20731 trigger factor YP_003398221.1 591743 D 591001 CDS YP_003398222.1 284047883 8736962 593080..593673 1 NC_013740.1 KEGG: spe:Spro_1095 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP 593673 8736962 Acfer_0504 Acidaminococcus fermentans DSM 20731 ATP-dependent Clp protease, proteolytic subunit ClpP YP_003398222.1 593080 D 591001 CDS YP_003398223.1 284047884 8736963 593715..594986 1 NC_013740.1 KEGG: aoe:Clos_2173 ATP-dependent protease ATP- binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; Clp ATPase-like; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX 594986 8736963 Acfer_0505 Acidaminococcus fermentans DSM 20731 ATP-dependent Clp protease ATP-binding subunit ClpX YP_003398223.1 593715 D 591001 CDS YP_003398224.1 284047885 8736964 595055..597373 1 NC_013740.1 KEGG: chy:CHY_0330 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La 597373 8736964 Acfer_0506 Acidaminococcus fermentans DSM 20731 ATP-dependent protease La YP_003398224.1 595055 D 591001 CDS YP_003398225.1 284047886 8736965 597375..598004 1 NC_013740.1 TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; KEGG: cpf:CPF_1643 ribosome biogenesis GTP-binding protein YsxC; ribosome biogenesis GTP-binding protein YsxC 598004 8736965 Acfer_0507 Acidaminococcus fermentans DSM 20731 ribosome biogenesis GTP-binding protein YsxC YP_003398225.1 597375 D 591001 CDS YP_003398226.1 284047887 8736966 598105..598773 1 NC_013740.1 PFAM: NUDIX hydrolase; KEGG: pth:PTH_1823 hypothetical protein; NUDIX hydrolase 598773 8736966 Acfer_0508 Acidaminococcus fermentans DSM 20731 NUDIX hydrolase YP_003398226.1 598105 D 591001 CDS YP_003398227.1 284047888 8736967 complement(598691..599908) 1 NC_013740.1 PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: gem:GM21_2665 type IV pilus secretin PilQ; type II and III secretion system protein 599908 8736967 Acfer_0509 Acidaminococcus fermentans DSM 20731 type II and III secretion system protein YP_003398227.1 598691 R 591001 CDS YP_003398228.1 284047889 8736968 complement(599908..600417) 1 NC_013740.1 KEGG: nfa:nfa5130 hypothetical protein; hypothetical protein 600417 8736968 Acfer_0510 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398228.1 599908 R 591001 CDS YP_003398229.1 284047890 8736969 600542..601780 1 NC_013740.1 PFAM: type II secretion system protein E; KEGG: dac:Daci_1299 general secretory pathway protein E; type II secretion system protein E 601780 8736969 Acfer_0511 Acidaminococcus fermentans DSM 20731 type II secretion system protein E YP_003398229.1 600542 D 591001 CDS YP_003398230.1 284047891 8736970 601790..602458 1 NC_013740.1 PFAM: protein of unknown function UPF0126; KEGG: cce:Ccel_1024 protein of unknown function UPF0126; hypothetical protein 602458 8736970 Acfer_0512 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398230.1 601790 D 591001 CDS YP_003398231.1 284047892 8736971 complement(602526..603017) 1 NC_013740.1 PFAM: protein of unknown function DUF520; KEGG: gsu:GSU3204 putative nucleotide-binding protein; hypothetical protein 603017 8736971 Acfer_0513 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398231.1 602526 R 591001 CDS YP_003398232.1 284047893 8736972 complement(603185..604741) 1 NC_013740.1 KEGG: mta:Moth_2335 hypothetical protein; hypothetical protein 604741 8736972 Acfer_0514 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398232.1 603185 R 591001 CDS YP_003398233.1 284047894 8736973 604877..606871 1 NC_013740.1 KEGG: mta:Moth_0251 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B 606871 8736973 Acfer_0515 Acidaminococcus fermentans DSM 20731 excinuclease ABC subunit B YP_003398233.1 604877 D 591001 CDS YP_003398234.1 284047895 8736974 606864..609683 1 NC_013740.1 KEGG: chy:CHY_0259 excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; excinuclease ABC subunit A 609683 8736974 Acfer_0516 Acidaminococcus fermentans DSM 20731 excinuclease ABC subunit A YP_003398234.1 606864 D 591001 CDS YP_003398235.1 284047896 8736975 609680..611536 1 NC_013740.1 KEGG: dae:Dtox_3952 excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; excinuclease ABC subunit C 611536 8736975 Acfer_0517 Acidaminococcus fermentans DSM 20731 excinuclease ABC subunit C YP_003398235.1 609680 D 591001 CDS YP_003398236.1 284047897 8736976 611651..611812 1 NC_013740.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cno:NT01CX_1169 rubredoxin; rubredoxin-type Fe(Cys)4 protein 611812 8736976 Acfer_0518 Acidaminococcus fermentans DSM 20731 rubredoxin-type Fe(Cys)4 protein YP_003398236.1 611651 D 591001 CDS YP_003398237.1 284047898 8736977 611941..612834 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bhy:BHWA1_02024 LysR family transcriptional regulator; LysR family transcriptional regulator 612834 8736977 Acfer_0519 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398237.1 611941 D 591001 CDS YP_003398238.1 284047899 8736978 612958..614091 1 NC_013740.1 KEGG: pdi:BDI_0980 alpha/beta family hydrolase; alpha/beta family hydrolase 614091 8736978 Acfer_0520 Acidaminococcus fermentans DSM 20731 alpha/beta family hydrolase YP_003398238.1 612958 D 591001 CDS YP_003398239.1 284047900 8736979 614262..615431 1 NC_013740.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: fma:FMG_1265 NADH-dependent butanol dehydrogenase; iron-containing alcohol dehydrogenase 615431 8736979 Acfer_0521 Acidaminococcus fermentans DSM 20731 iron-containing alcohol dehydrogenase YP_003398239.1 614262 D 591001 CDS YP_003398240.1 284047901 8736980 615666..616787 1 NC_013740.1 KEGG: cko:CKO_02592 hypothetical protein; hypothetical protein 616787 8736980 Acfer_0522 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398240.1 615666 D 591001 CDS YP_003398241.1 284047902 8736981 complement(616790..617617) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: lba:Lebu_1438 LysR family transcriptional regulator; LysR family transcriptional regulator 617617 8736981 Acfer_0523 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398241.1 616790 R 591001 CDS YP_003398242.1 284047903 8736982 617806..618657 1 NC_013740.1 PFAM: aldo/keto reductase; KEGG: ere:EUBREC_3461 oxidoreductase, aldo/keto reductase family; aldo/keto reductase 618657 8736982 Acfer_0524 Acidaminococcus fermentans DSM 20731 aldo/keto reductase YP_003398242.1 617806 D 591001 CDS YP_003398243.1 284047904 8736983 618683..619531 1 NC_013740.1 PFAM: aldo/keto reductase; KEGG: lac:LBA0558 aldehyde reductase; 2,5-didehydrogluconate reductase 619531 8736983 Acfer_0525 Acidaminococcus fermentans DSM 20731 2,5-didehydrogluconate reductase YP_003398243.1 618683 D 591001 CDS YP_003398244.1 284047905 8736987 620561..620980 1 NC_013740.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein; cupin 620980 8736987 Acfer_0529 Acidaminococcus fermentans DSM 20731 cupin YP_003398244.1 620561 D 591001 CDS YP_003398245.1 284047906 8736988 620996..621622 1 NC_013740.1 KEGG: lba:Lebu_1430 hypothetical protein; hypothetical protein 621622 8736988 Acfer_0530 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398245.1 620996 D 591001 CDS YP_003398246.1 284047907 8736989 621864..622367 1 NC_013740.1 KEGG: dth:DICTH_0011 flavodoxin; flavodoxin 622367 8736989 Acfer_0531 Acidaminococcus fermentans DSM 20731 flavodoxin YP_003398246.1 621864 D 591001 CDS YP_003398247.1 284047908 8736990 622445..622642 1 NC_013740.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: mta:Moth_1278 sec-independent protein translocase TatA; twin-arginine translocation protein, TatA/E family subunit 622642 8736990 Acfer_0532 Acidaminococcus fermentans DSM 20731 twin-arginine translocation protein, TatA/E family subunit YP_003398247.1 622445 D 591001 CDS YP_003398248.1 284047909 8736991 622647..623330 1 NC_013740.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: dba:Dbac_2494 sec-independent protein translocase, TatC subunit; Sec-independent protein translocase subunit TatC 623330 8736991 Acfer_0533 Acidaminococcus fermentans DSM 20731 Sec-independent protein translocase subunit TatC YP_003398248.1 622647 D 591001 CDS YP_003398249.1 284047910 8736992 623672..624991 1 NC_013740.1 KEGG: pth:PTH_2212 phosphatase; hypothetical protein 624991 8736992 Acfer_0534 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398249.1 623672 D 591001 CDS YP_003398250.1 284047911 8736993 625239..625694 1 NC_013740.1 KEGG: bvu:BVU_3085 flavodoxin; flavodoxin 625694 8736993 Acfer_0535 Acidaminococcus fermentans DSM 20731 flavodoxin YP_003398250.1 625239 D 591001 CDS YP_003398251.1 284047912 8736994 625759..626877 1 NC_013740.1 KEGG: shi:Shel_17170 hypothetical protein; hypothetical protein 626877 8736994 Acfer_0536 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398251.1 625759 D 591001 CDS YP_003398252.1 284047913 8736995 627021..627458 1 NC_013740.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bfs:BF2138 carboxymuconolactone decarboxylase; Carboxymuconolactone decarboxylase 627458 8736995 Acfer_0537 Acidaminococcus fermentans DSM 20731 Carboxymuconolactone decarboxylase YP_003398252.1 627021 D 591001 CDS YP_003398253.1 284047914 8736996 627559..627762 1 NC_013740.1 hypothetical protein 627762 8736996 Acfer_0538 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398253.1 627559 D 591001 CDS YP_003398254.1 284047915 8736997 complement(627842..628735) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: lwe:lwe0390 LysR family transcriptional regulator; LysR family transcriptional regulator 628735 8736997 Acfer_0539 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398254.1 627842 R 591001 CDS YP_003398255.1 284047916 8736998 628912..629157 1 NC_013740.1 KEGG: dae:Dtox_0028 radical SAM domain protein; hypothetical protein 629157 8736998 Acfer_0540 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398255.1 628912 D 591001 CDS YP_003398256.1 284047917 8737000 630053..630862 1 NC_013740.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: dae:Dtox_3945 Cof-like hydrolase; cof family hydrolase 630862 8737000 Acfer_0542 Acidaminococcus fermentans DSM 20731 cof family hydrolase YP_003398256.1 630053 D 591001 CDS YP_003398257.1 284047918 8737001 630944..631804 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: ctc:CTC02495 hypothetical protein; hypothetical protein 631804 8737001 Acfer_0543 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398257.1 630944 D 591001 CDS YP_003398258.1 284047919 8737002 631815..633188 1 NC_013740.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: dae:Dtox_3940 protein of unknown function UPF0052 and CofD; hypothetical protein 633188 8737002 Acfer_0544 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398258.1 631815 D 591001 CDS YP_003398259.1 284047920 8737003 633191..634120 1 NC_013740.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: bcb:BCB4264_A5272 hypothetical protein; hypothetical protein 634120 8737003 Acfer_0545 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398259.1 633191 D 591001 CDS YP_003398260.1 284047921 8737004 634117..634968 1 NC_013740.1 PFAM: polysaccharide deacetylase; KEGG: chy:CHY_0274 polysaccharide deacetylase family protein; polysaccharide deacetylase 634968 8737004 Acfer_0546 Acidaminococcus fermentans DSM 20731 polysaccharide deacetylase YP_003398260.1 634117 D 591001 CDS YP_003398261.1 284047922 8737005 635053..635199 1 NC_013740.1 KEGG: drm:Dred_3299 hypothetical protein; hypothetical protein 635199 8737005 Acfer_0547 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398261.1 635053 D 591001 CDS YP_003398262.1 284047923 8737006 635277..636683 1 NC_013740.1 PFAM: Radical SAM domain protein; KEGG: aoe:Clos_1718 radical SAM domain-containing protein; radical SAM protein 636683 8737006 Acfer_0548 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003398262.1 635277 D 591001 CDS YP_003398263.1 284047924 8737012 642593..643381 1 NC_013740.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: drm:Dred_1781 enoyl-CoA hydratase/isomerase; Enoyl-CoA hydratase/isomerase 643381 8737012 Acfer_0549 Acidaminococcus fermentans DSM 20731 Enoyl-CoA hydratase/isomerase YP_003398263.1 642593 D 591001 CDS YP_003398264.1 284047925 8737013 complement(643589..644107) 1 NC_013740.1 hypothetical protein 644107 8737013 Acfer_0550 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398264.1 643589 R 591001 CDS YP_003398265.1 284047926 8737014 644221..645828 1 NC_013740.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: cce:Ccel_1759 RNA-metabolising metallo-beta- lactamase; RNA-metabolising metallo-beta-lactamase 645828 8737014 Acfer_0551 Acidaminococcus fermentans DSM 20731 RNA-metabolising metallo-beta-lactamase YP_003398265.1 644221 D 591001 CDS YP_003398266.1 284047927 8737015 645956..647776 1 NC_013740.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; KEGG: cac:CAC1684 TypA/BipA type GTPase; GTP-binding protein TypA 647776 8737015 Acfer_0552 Acidaminococcus fermentans DSM 20731 GTP-binding protein TypA YP_003398266.1 645956 D 591001 CDS YP_003398267.1 284047928 8737016 647974..648297 1 NC_013740.1 PFAM: protein of unknown function DUF552; hypothetical protein 648297 8737016 Acfer_0553 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398267.1 647974 D 591001 CDS YP_003398268.1 284047929 8737017 648449..651865 1 NC_013740.1 KEGG: pth:PTH_2220 DNA polymerase III DnaE; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 651865 8737017 Acfer_0554 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunit alpha YP_003398268.1 648449 D 591001 CDS YP_003398269.1 284047930 8737018 652172..652963 1 NC_013740.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: apr:Apre_1355 electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha/beta- subunit 652963 8737018 Acfer_0555 Acidaminococcus fermentans DSM 20731 Electron transfer flavoprotein alpha/beta- subunit YP_003398269.1 652172 D 591001 CDS YP_003398270.1 284047931 8737019 652976..653998 1 NC_013740.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: cbl:CLK_2702 electron transfer flavoprotein, alpha subunit/FixB family protein; electron transfer flavoprotein subunit alpha 653998 8737019 Acfer_0556 Acidaminococcus fermentans DSM 20731 electron transfer flavoprotein subunit alpha YP_003398270.1 652976 D 591001 CDS YP_003398271.1 284047932 8737020 654113..655861 1 NC_013740.1 TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PEP-utilising protein mobile region; KEGG: bbe:BBR47_13840 pyruvate kinase; pyruvate kinase 655861 8737020 Acfer_0557 Acidaminococcus fermentans DSM 20731 pyruvate kinase YP_003398271.1 654113 D 591001 CDS YP_003398272.1 284047933 8737021 656198..657280 1 NC_013740.1 PFAM: acyltransferase 3; KEGG: aoe:Clos_0058 acyltransferase 3; acyltransferase 3 657280 8737021 Acfer_0558 Acidaminococcus fermentans DSM 20731 acyltransferase 3 YP_003398272.1 656198 D 591001 CDS YP_003398273.1 284047934 8737022 657336..657887 1 NC_013740.1 KEGG: cpo:COPRO5265_0171 HymD protein; HymD protein 657887 8737022 Acfer_0559 Acidaminococcus fermentans DSM 20731 HymD protein YP_003398273.1 657336 D 591001 CDS YP_003398274.1 284047935 8737023 658020..659375 1 NC_013740.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: ere:EUBREC_2802 potassium transporter peripheral membrane component; TrkA-N domain-containing protein 659375 8737023 Acfer_0560 Acidaminococcus fermentans DSM 20731 TrkA-N domain-containing protein YP_003398274.1 658020 D 591001 CDS YP_003398275.1 284047936 8737024 659391..660833 1 NC_013740.1 PFAM: cation transporter; KEGG: eel:EUBELI_01578 trk system potassium uptake protein TrkH; cation transporter 660833 8737024 Acfer_0561 Acidaminococcus fermentans DSM 20731 cation transporter YP_003398275.1 659391 D 591001 CDS YP_003398276.1 284047937 8737025 660880..661674 1 NC_013740.1 PFAM: PHP domain protein; KEGG: eat:EAT1b_1202 protein-tyrosine-phosphatase; protein-tyrosine-phosphatase 661674 8737025 Acfer_0562 Acidaminococcus fermentans DSM 20731 protein-tyrosine-phosphatase YP_003398276.1 660880 D 591001 CDS YP_003398277.1 284047938 8737026 662107..662760 1 NC_013740.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: cyc:PCC7424_4601 polysaccharide export protein; polysaccharide export protein 662760 8737026 Acfer_0563 Acidaminococcus fermentans DSM 20731 polysaccharide export protein YP_003398277.1 662107 D 591001 CDS YP_003398278.1 284047939 8737027 662778..664226 1 NC_013740.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: pmo:Pmob_0944 exopolysaccharide tyrosine- protein kinase; lipopolysaccharide biosynthesis protein 664226 8737027 Acfer_0564 Acidaminococcus fermentans DSM 20731 lipopolysaccharide biosynthesis protein YP_003398278.1 662778 D 591001 CDS YP_003398279.1 284047940 8737028 664214..664936 1 NC_013740.1 TIGRFAM: capsular exopolysaccharide family; KEGG: cno:NT01CX_1523 capsular polysaccharide biosynthesis protein Cap1B; capsular exopolysaccharide family protein 664936 8737028 Acfer_0565 Acidaminococcus fermentans DSM 20731 capsular exopolysaccharide family protein YP_003398279.1 664214 D 591001 CDS YP_003398280.1 284047941 8737029 665034..666431 1 NC_013740.1 KEGG: cac:CAC2330 sugar transferase involved in lipopolysaccharide synthesis; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 666431 8737029 Acfer_0566 Acidaminococcus fermentans DSM 20731 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003398280.1 665034 D 591001 CDS YP_003398281.1 284047942 8737030 666425..667195 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: nam:NAMH_1654 teichuronic acid biosynthesis; family 2 glycosyl transferase 667195 8737030 Acfer_0567 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398281.1 666425 D 591001 CDS YP_003398282.1 284047943 8737031 667211..668098 1 NC_013740.1 KEGG: pdi:BDI_0439 putative glycosyltransferase; putative glycosyltransferase 668098 8737031 Acfer_0568 Acidaminococcus fermentans DSM 20731 putative glycosyltransferase YP_003398282.1 667211 D 591001 CDS YP_003398283.1 284047944 8737032 668116..669351 1 NC_013740.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; KEGG: pdi:BDI_2215 UDP-glucose 6-dehydrogenase; nucleotide sugar dehydrogenase 669351 8737032 Acfer_0569 Acidaminococcus fermentans DSM 20731 nucleotide sugar dehydrogenase YP_003398283.1 668116 D 591001 CDS YP_003398284.1 284047945 8737033 669438..670568 1 NC_013740.1 PFAM: glycosyl transferase group 1; KEGG: cpf:CPF_0914 capsular polysaccharide biosynthesis protein; group 1 glycosyl transferase 670568 8737033 Acfer_0570 Acidaminococcus fermentans DSM 20731 group 1 glycosyl transferase YP_003398284.1 669438 D 591001 CDS YP_003398285.1 284047946 8737034 670571..671635 1 NC_013740.1 KEGG: cpf:CPF_0915 putative polysaccharide polymerase protein; hypothetical protein 671635 8737034 Acfer_0571 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398285.1 670571 D 591001 CDS YP_003398286.1 284047947 8737035 671666..672181 1 NC_013740.1 KEGG: gka:GK3309 serine acetyltransferase; Serine acetyltransferase-like protein 672181 8737035 Acfer_0572 Acidaminococcus fermentans DSM 20731 Serine acetyltransferase-like protein YP_003398286.1 671666 D 591001 CDS YP_003398287.1 284047948 8737036 672220..673170 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0061 glycosyl transferase family 2; family 2 glycosyl transferase 673170 8737036 Acfer_0573 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398287.1 672220 D 591001 CDS YP_003398288.1 284047949 8737037 673271..675790 1 NC_013740.1 KEGG: sjj:SPJ_0086 hypothetical protein; hypothetical protein 675790 8737037 Acfer_0574 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398288.1 673271 D 591001 CDS YP_003398289.1 284047950 8737038 675834..677237 1 NC_013740.1 KEGG: bce:BC5266 heteropolysaccharide repeat- containing protein; heteropolysaccharide repeat-containing protein 677237 8737038 Acfer_0575 Acidaminococcus fermentans DSM 20731 heteropolysaccharide repeat-containing protein YP_003398289.1 675834 D 591001 CDS YP_003398290.1 284047951 8737039 677296..678177 1 NC_013740.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: dhd:Dhaf_4472 glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylyltransferase 678177 8737039 Acfer_0576 Acidaminococcus fermentans DSM 20731 glucose-1-phosphate thymidylyltransferase YP_003398290.1 677296 D 591001 CDS YP_003398291.1 284047952 8737040 678247..678612 1 NC_013740.1 PFAM: S23 ribosomal protein; KEGG: tbd:Tbd_0653 hypothetical protein; S23 ribosomal protein 678612 8737040 Acfer_0577 Acidaminococcus fermentans DSM 20731 S23 ribosomal protein YP_003398291.1 678247 D 591001 CDS YP_003398292.1 284047953 8737041 678779..679798 1 NC_013740.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: eel:EUBELI_00086 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 679798 8737041 Acfer_0578 Acidaminococcus fermentans DSM 20731 dTDP-glucose 4,6-dehydratase YP_003398292.1 678779 D 591001 CDS YP_003398293.1 284047954 8737042 679822..680727 1 NC_013740.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; KEGG: lga:LGAS_1133 dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 680727 8737042 Acfer_0579 Acidaminococcus fermentans DSM 20731 dTDP-4-dehydrorhamnose reductase YP_003398293.1 679822 D 591001 CDS YP_003398294.1 284047955 8737043 680992..681597 1 NC_013740.1 KEGG: lbu:LBUL_1836 dTDP-4-dehydrorhamnose 3,5- epimerase related enzyme; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 681597 8737043 Acfer_0580 Acidaminococcus fermentans DSM 20731 dTDP-4-dehydrorhamnose 3,5-epimerase YP_003398294.1 680992 D 591001 CDS YP_003398295.1 284047956 8737045 682273..683346 1 NC_013740.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mmy:MSC_1062 AAA ATPase family protein; AAA ATPase 683346 8737045 Acfer_0582 Acidaminococcus fermentans DSM 20731 AAA ATPase YP_003398295.1 682273 D 591001 CDS YP_003398296.1 284047957 8737046 683330..685585 1 NC_013740.1 KEGG: lwe:lwe0773 AAA - ATPase, putative; AAA ATPase 685585 8737046 Acfer_0583 Acidaminococcus fermentans DSM 20731 AAA ATPase YP_003398296.1 683330 D 591001 CDS YP_003398297.1 284047958 8737049 687198..688310 1 NC_013740.1 KEGG: rrs:RoseRS_1475 hypothetical protein; hypothetical protein 688310 8737049 Acfer_0586 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398297.1 687198 D 591001 CDS YP_003398298.1 284047959 8737050 688311..690038 1 NC_013740.1 KEGG: cyt:cce_2019 hypothetical protein; hypothetical protein 690038 8737050 Acfer_0587 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398298.1 688311 D 591001 CDS YP_003398299.1 284047960 8737052 690706..691221 1 NC_013740.1 hypothetical protein 691221 8737052 Acfer_0589 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398299.1 690706 D 591001 CDS YP_003398300.1 284047961 8737053 691218..692006 1 NC_013740.1 PFAM: Domain of unknown function DUF1828; Domain of unknown function DUF1829; KEGG: cts:Ctha_2640 domain of unknown function DUF1828; hypothetical protein 692006 8737053 Acfer_0590 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398300.1 691218 D 591001 CDS YP_003398301.1 284047962 8737054 692526..693323 1 NC_013740.1 KEGG: pfu:PF1996 deoxycytidine triphosphate deaminase; Deoxycytidine deaminase-like protein 693323 8737054 Acfer_0591 Acidaminococcus fermentans DSM 20731 Deoxycytidine deaminase-like protein YP_003398301.1 692526 D 591001 CDS YP_003398302.1 284047963 8737055 693621..695132 1 NC_013740.1 KEGG: gur:Gura_3176 hypothetical protein; hypothetical protein 695132 8737055 Acfer_0592 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398302.1 693621 D 591001 CDS YP_003398303.1 284047964 8737056 695355..696794 1 NC_013740.1 PFAM: phosphoglucose isomerase (PGI); KEGG: hor:Hore_19060 glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 696794 8737056 Acfer_0593 Acidaminococcus fermentans DSM 20731 glucose-6-phosphate isomerase YP_003398303.1 695355 D 591001 CDS YP_003398304.1 284047965 8737057 complement(696927..697724) 1 NC_013740.1 PFAM: glycosyl transferase family 51; KEGG: aae:aq_624 penicillin binding protein 1A; peptidoglycan glycosyltransferase 697724 8737057 Acfer_0594 Acidaminococcus fermentans DSM 20731 peptidoglycan glycosyltransferase YP_003398304.1 696927 R 591001 CDS YP_003398305.1 284047966 8737058 698091..698978 1 NC_013740.1 KEGG: mta:Moth_2288 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase 698978 8737058 Acfer_0595 Acidaminococcus fermentans DSM 20731 acetylglutamate kinase YP_003398305.1 698091 D 591001 CDS YP_003398306.1 284047967 8737059 698994..700184 1 NC_013740.1 KEGG: pth:PTH_0504 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 700184 8737059 Acfer_0596 Acidaminococcus fermentans DSM 20731 acetylornithine and succinylornithine aminotransferase YP_003398306.1 698994 D 591001 CDS YP_003398307.1 284047968 8737060 700203..701144 1 NC_013740.1 KEGG: mta:Moth_2286 ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 701144 8737060 Acfer_0597 Acidaminococcus fermentans DSM 20731 ornithine carbamoyltransferase YP_003398307.1 700203 D 591001 CDS YP_003398308.1 284047969 8737061 701181..702401 1 NC_013740.1 KEGG: dhd:Dhaf_0795 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase 702401 8737061 Acfer_0598 Acidaminococcus fermentans DSM 20731 argininosuccinate synthase YP_003398308.1 701181 D 591001 CDS YP_003398309.1 284047970 8737062 702401..703819 1 NC_013740.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: pth:PTH_0517 argininosuccinate lyase; argininosuccinate lyase 703819 8737062 Acfer_0599 Acidaminococcus fermentans DSM 20731 argininosuccinate lyase YP_003398309.1 702401 D 591001 CDS YP_003398310.1 284047971 8737063 complement(703917..705173) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: apr:Apre_0497 amidohydrolase; amidohydrolase 705173 8737063 Acfer_0600 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003398310.1 703917 R 591001 CDS YP_003398311.1 284047972 8737064 705327..706196 1 NC_013740.1 PFAM: protein of unknown function DUF147; KEGG: drm:Dred_0292 hypothetical protein; hypothetical protein 706196 8737064 Acfer_0601 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398311.1 705327 D 591001 CDS YP_003398312.1 284047973 8737065 706183..707151 1 NC_013740.1 PFAM: YbbR family protein; KEGG: mta:Moth_2247 YbbR-like; hypothetical protein 707151 8737065 Acfer_0602 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398312.1 706183 D 591001 CDS YP_003398313.1 284047974 8737066 707120..708733 1 NC_013740.1 PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: gme:Gmet_2676 FAD dependent oxidoreductase; FAD dependent oxidoreductase 708733 8737066 Acfer_0603 Acidaminococcus fermentans DSM 20731 FAD dependent oxidoreductase YP_003398313.1 707120 D 591001 CDS YP_003398314.1 284047975 8737067 708864..709793 1 NC_013740.1 PFAM: DHHA2 domain protein; phosphoesterase RecJ domain protein; KEGG: cac:CAC2138 putative manganese-dependent inorganic pyrophosphatase; inorganic diphosphatase 709793 8737067 Acfer_0604 Acidaminococcus fermentans DSM 20731 inorganic diphosphatase YP_003398314.1 708864 D 591001 CDS YP_003398315.1 284047976 8737068 709811..709912 1 NC_013740.1 hypothetical protein 709912 8737068 Acfer_0605 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398315.1 709811 D 591001 CDS YP_003398316.1 284047977 8737069 710118..711326 1 NC_013740.1 KEGG: tte:TTE0387 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase 711326 8737069 Acfer_0606 Acidaminococcus fermentans DSM 20731 isocitrate dehydrogenase YP_003398316.1 710118 D 591001 CDS YP_003398317.1 284047978 8737070 complement(711361..711591) 1 NC_013740.1 hypothetical protein 711591 8737070 Acfer_0607 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398317.1 711361 R 591001 CDS YP_003398318.1 284047979 8737071 711704..712132 1 NC_013740.1 KEGG: tpd:Teth39_1726 hypothetical protein; hypothetical protein 712132 8737071 Acfer_0608 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398318.1 711704 D 591001 CDS YP_003398319.1 284047980 8737076 complement(712639..712803) 1 NC_013740.1 hypothetical protein 712803 8737076 Acfer_0609 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398319.1 712639 R 591001 CDS YP_003398320.1 284047981 8737078 713077..713814 1 NC_013740.1 PFAM: GCN5-related N-acetyltransferase; KEGG: blj:BLD_0148 acetyltransferase; N-acetyltransferase GCN5 713814 8737078 Acfer_0611 Acidaminococcus fermentans DSM 20731 N-acetyltransferase GCN5 YP_003398320.1 713077 D 591001 CDS YP_003398321.1 284047982 8737079 713834..715150 1 NC_013740.1 PFAM: protein of unknown function DUF1063; KEGG: dhd:Dhaf_2196 protein of unknown function DUF1063; hypothetical protein 715150 8737079 Acfer_0612 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398321.1 713834 D 591001 CDS YP_003398322.1 284047983 8737080 complement(715208..716593) 1 NC_013740.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: eel:EUBELI_01284 putative MFS transporter, AGZA family, xanthine/uracil permease; xanthine/uracil/vitamin C permease 716593 8737080 Acfer_0613 Acidaminococcus fermentans DSM 20731 xanthine/uracil/vitamin C permease YP_003398322.1 715208 R 591001 CDS YP_003398323.1 284047984 8737081 716703..718955 1 NC_013740.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: gwc:GWCH70_0270 ATP-dependent DNA helicase PcrA; ATP-dependent DNA helicase PcrA 718955 8737081 Acfer_0614 Acidaminococcus fermentans DSM 20731 ATP-dependent DNA helicase PcrA YP_003398323.1 716703 D 591001 CDS YP_003398324.1 284047985 8737082 718969..720996 1 NC_013740.1 KEGG: pth:PTH_2527 NAD-dependent DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD- dependent DNA ligase OB-fold; zinc-finger NAD-dependent DNA ligase C4-type; BRCT domain protein; SMART: NAD-dependent DNA ligase ; Helix-hairpin- helix DNA-binding class 1; BRCT domain protein; NAD-dependent DNA ligase 720996 8737082 Acfer_0615 Acidaminococcus fermentans DSM 20731 NAD-dependent DNA ligase YP_003398324.1 718969 D 591001 CDS YP_003398325.1 284047986 8737083 complement(721179..722855) 1 NC_013740.1 PFAM: carbon starvation protein CstA; KEGG: eel:EUBELI_01881 carbon starvation protein; carbon starvation protein CstA 722855 8737083 Acfer_0616 Acidaminococcus fermentans DSM 20731 carbon starvation protein CstA YP_003398325.1 721179 R 591001 CDS YP_003398326.1 284047987 8737084 complement(723130..723315) 1 NC_013740.1 hypothetical protein 723315 8737084 Acfer_0617 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398326.1 723130 R 591001 CDS YP_003398327.1 284047988 8737085 723480..724340 1 NC_013740.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: cbe:Cbei_4954 5-carboxymethyl-2- hydroxymuconate delta-isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 724340 8737085 Acfer_0618 Acidaminococcus fermentans DSM 20731 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_003398327.1 723480 D 591001 CDS YP_003398328.1 284047989 8737087 724632..725645 1 NC_013740.1 PFAM: PhoH family protein; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, ATPase; PhoH family protein 725645 8737087 Acfer_0619 Acidaminococcus fermentans DSM 20731 PhoH family protein YP_003398328.1 724632 D 591001 CDS YP_003398329.1 284047990 8737088 725642..726124 1 NC_013740.1 PFAM: protein of unknown function UPF0054; KEGG: dsy:DSY3109 hypothetical protein; hypothetical protein 726124 8737088 Acfer_0620 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398329.1 725642 D 591001 CDS YP_003398330.1 284047991 8737089 726114..726500 1 NC_013740.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sth:STH533 cytidine deaminase; cytidine deaminase 726500 8737089 Acfer_0621 Acidaminococcus fermentans DSM 20731 cytidine deaminase YP_003398330.1 726114 D 591001 CDS YP_003398331.1 284047992 8737090 726516..727442 1 NC_013740.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: bbe:BBR47_20660 probable GTP-binding protein; GTP-binding protein Era 727442 8737090 Acfer_0622 Acidaminococcus fermentans DSM 20731 GTP-binding protein Era YP_003398331.1 726516 D 591001 CDS YP_003398332.1 284047993 8737091 727587..728441 1 NC_013740.1 PFAM: hypothetical protein; protein of unknown function DUF21; transporter-associated region; KEGG: dhd:Dhaf_3277 protein of unknown function DUF21; hypothetical protein 728441 8737091 Acfer_0623 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398332.1 727587 D 591001 CDS YP_003398333.1 284047994 8737092 728431..729177 1 NC_013740.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: pth:PTH_0897 recombinational DNA repair protein; DNA repair protein RecO 729177 8737092 Acfer_0624 Acidaminococcus fermentans DSM 20731 DNA repair protein RecO YP_003398333.1 728431 D 591001 CDS YP_003398334.1 284047995 8737093 729170..729880 1 NC_013740.1 hypothetical protein 729880 8737093 Acfer_0625 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398334.1 729170 D 591001 CDS YP_003398335.1 284047996 8737094 729933..730685 1 NC_013740.1 KEGG: dhd:Dhaf_4586 exodeoxyribonuclease III Xth; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III 730685 8737094 Acfer_0626 Acidaminococcus fermentans DSM 20731 exodeoxyribonuclease III YP_003398335.1 729933 D 591001 CDS YP_003398336.1 284047997 8737095 730697..731473 1 NC_013740.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: hmo:HM1_2922 ADP-ribosyl glycohydrolase, putative; ADP-ribosylation/Crystallin J1 731473 8737095 Acfer_0627 Acidaminococcus fermentans DSM 20731 ADP-ribosylation/Crystallin J1 YP_003398336.1 730697 D 591001 CDS YP_003398337.1 284047998 8737096 complement(731508..732416) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC1046 LysR family transcriptional regulator; LysR family transcriptional regulator 732416 8737096 Acfer_0628 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398337.1 731508 R 591001 CDS YP_003398338.1 284047999 8737097 732758..733900 1 NC_013740.1 PFAM: protein of unknown function DUF453; KEGG: bay:RBAM_031870 YraM; hypothetical protein 733900 8737097 Acfer_0629 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398338.1 732758 D 591001 CDS YP_003398339.1 284048000 8737098 733924..735189 1 NC_013740.1 PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: aoe:Clos_0814 dicarboxylate carrier MatC domain-containing protein; dicarboxylate carrier MatC domain-containing protein 735189 8737098 Acfer_0630 Acidaminococcus fermentans DSM 20731 dicarboxylate carrier MatC domain-containing protein YP_003398339.1 733924 D 591001 CDS YP_003398340.1 284048001 8737099 735211..737484 1 NC_013740.1 PFAM: aconitate hydratase domain protein; KEGG: kpe:KPK_4725 hypothetical protein; aconitate hydratase 737484 8737099 Acfer_0631 Acidaminococcus fermentans DSM 20731 aconitate hydratase YP_003398340.1 735211 D 591001 CDS YP_003398341.1 284048002 8737100 complement(737514..738293) 1 NC_013740.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aac:Aaci_1954 prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 738293 8737100 Acfer_0632 Acidaminococcus fermentans DSM 20731 prolipoprotein diacylglyceryl transferase YP_003398341.1 737514 R 591001 CDS YP_003398342.1 284048003 8737101 complement(738555..739259) 1 NC_013740.1 PFAM: metallophosphoesterase; KEGG: amt:Amet_3677 metallophosphoesterase; metallophosphoesterase 739259 8737101 Acfer_0633 Acidaminococcus fermentans DSM 20731 metallophosphoesterase YP_003398342.1 738555 R 591001 CDS YP_003398343.1 284048004 8737102 739415..741904 1 NC_013740.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: cth:Cthe_1237 leucyl-tRNA synthetase; leucyl-tRNA synthetase 741904 8737102 Acfer_0634 Acidaminococcus fermentans DSM 20731 leucyl-tRNA synthetase YP_003398343.1 739415 D 591001 CDS YP_003398344.1 284048005 8737103 742028..743473 1 NC_013740.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: fnu:FN0501 arginase; Orn/Lys/Arg decarboxylase major region 743473 8737103 Acfer_0635 Acidaminococcus fermentans DSM 20731 Orn/Lys/Arg decarboxylase major region YP_003398344.1 742028 D 591001 CDS YP_003398345.1 284048006 8737104 743470..744090 1 NC_013740.1 KEGG: kra:Krad_0489 dTMP kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase 744090 8737104 Acfer_0636 Acidaminococcus fermentans DSM 20731 thymidylate kinase YP_003398345.1 743470 D 591001 CDS YP_003398346.1 284048007 8737105 744083..745153 1 NC_013740.1 KEGG: cth:Cthe_2105 DNA polymerase III, delta prime subunit; DNA-directed DNA polymerase 745153 8737105 Acfer_0637 Acidaminococcus fermentans DSM 20731 DNA-directed DNA polymerase YP_003398346.1 744083 D 591001 CDS YP_003398347.1 284048008 8737106 745169..746011 1 NC_013740.1 PFAM: PSP1 domain protein; KEGG: bcy:Bcer98_0027 PSP1 domain-containing protein; PSP1 domain-containing protein 746011 8737106 Acfer_0638 Acidaminococcus fermentans DSM 20731 PSP1 domain-containing protein YP_003398347.1 745169 D 591001 CDS YP_003398348.1 284048009 8737107 746011..746745 1 NC_013740.1 PFAM: Methyltransferase type 11; KEGG: cdf:CD3547 hypothetical protein; type 11 methyltransferase 746745 8737107 Acfer_0639 Acidaminococcus fermentans DSM 20731 type 11 methyltransferase YP_003398348.1 746011 D 591001 CDS YP_003398349.1 284048010 8737108 746735..747565 1 NC_013740.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mta:Moth_0046 hypothetical protein; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 747565 8737108 Acfer_0640 Acidaminococcus fermentans DSM 20731 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003398349.1 746735 D 591001 CDS YP_003398350.1 284048011 8737109 complement(747802..748677) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: lbu:LBUL_1558 transcriptional regulator; LysR family transcriptional regulator 748677 8737109 Acfer_0641 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398350.1 747802 R 591001 CDS YP_003398351.1 284048012 8737110 748789..749808 1 NC_013740.1 PFAM: Uncharacterised protein family UPF0324; KEGG: ldb:Ldb1684 hypothetical protein; hypothetical protein 749808 8737110 Acfer_0642 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398351.1 748789 D 591001 CDS YP_003398352.1 284048013 8737111 750244..751584 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bad:BAD_0728 putative Na+-driven multidrug efflux pump; MATE efflux family protein 751584 8737111 Acfer_0643 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003398352.1 750244 D 591001 CDS YP_003398353.1 284048014 8737112 751631..752224 1 NC_013740.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eel:EUBELI_00454 putative hydrolases of HD superfamily; metal dependent phosphohydrolase 752224 8737112 Acfer_0644 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398353.1 751631 D 591001 CDS YP_003398354.1 284048015 8737113 752288..752743 1 NC_013740.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: eel:EUBELI_20029 peroxiredoxin (alkyl hydroperoxide reductase subunit C); peroxiredoxin 752743 8737113 Acfer_0645 Acidaminococcus fermentans DSM 20731 peroxiredoxin YP_003398354.1 752288 D 591001 CDS YP_003398355.1 284048016 8737114 752740..753498 1 NC_013740.1 PFAM: protein of unknown function DUF328; KEGG: ere:EUBREC_1226 hypothetical protein; hypothetical protein 753498 8737114 Acfer_0646 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398355.1 752740 D 591001 CDS YP_003398356.1 284048017 8737115 753529..754614 1 NC_013740.1 PFAM: glycoside hydrolase family 18; SMART: chitinase II; KEGG: bbe:BBR47_10680 hypothetical protein; glycoside hydrolase family protein 754614 8737115 Acfer_0647 Acidaminococcus fermentans DSM 20731 glycoside hydrolase family protein YP_003398356.1 753529 D 591001 CDS YP_003398357.1 284048018 8737116 754712..755497 1 NC_013740.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: drm:Dred_0727 extracellular solute-binding protein; family 3 extracellular solute-binding protein 755497 8737116 Acfer_0648 Acidaminococcus fermentans DSM 20731 family 3 extracellular solute-binding protein YP_003398357.1 754712 D 591001 CDS YP_003398358.1 284048019 8737117 755613..756392 1 NC_013740.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: dau:Daud_1135 extracellular solute-binding protein; family 3 extracellular solute-binding protein 756392 8737117 Acfer_0649 Acidaminococcus fermentans DSM 20731 family 3 extracellular solute-binding protein YP_003398358.1 755613 D 591001 CDS YP_003398359.1 284048020 8737118 756420..757076 1 NC_013740.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_0505 glutamine ABC transporter, permease protein; polar amino acid ABC transporter inner membrane subunit 757076 8737118 Acfer_0650 Acidaminococcus fermentans DSM 20731 polar amino acid ABC transporter inner membrane subunit YP_003398359.1 756420 D 591001 CDS YP_003398360.1 284048021 8737119 757066..757797 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dhd:Dhaf_4750 ABC transporter related; ABC transporter 757797 8737119 Acfer_0651 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398360.1 757066 D 591001 CDS YP_003398361.1 284048022 8737120 757945..758490 1 NC_013740.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pth:PTH_2754 ribosome-associated protein Y; ribosomal subunit interface protein 758490 8737120 Acfer_0652 Acidaminococcus fermentans DSM 20731 ribosomal subunit interface protein YP_003398361.1 757945 D 591001 CDS YP_003398362.1 284048023 8737121 758662..761139 1 NC_013740.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; KEGG: hmo:HM1_1266 preprotein translocase, SecA subunit; Preprotein translocase subunit SecA 761139 8737121 Acfer_0653 Acidaminococcus fermentans DSM 20731 Preprotein translocase subunit SecA YP_003398362.1 758662 D 591001 CDS YP_003398363.1 284048024 8737122 761270..762370 1 NC_013740.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: gwc:GWCH70_3007 hypothetical protein; peptide chain release factor 2 762370 8737122 Acfer_0654 Acidaminococcus fermentans DSM 20731 peptide chain release factor 2 YP_003398363.1 761270 D 591001 CDS YP_003398364.1 284048025 8737123 762390..764489 1 NC_013740.1 KEGG: hor:Hore_16410 hypothetical protein; hypothetical protein 764489 8737123 Acfer_0655 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398364.1 762390 D 591001 CDS YP_003398365.1 284048026 8737124 764482..765570 1 NC_013740.1 TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: polysaccharide pyruvyl transferase; KEGG: amt:Amet_4140 polysaccharide pyruvyl transferase; polysaccharide pyruvyl transferase CsaB 765570 8737124 Acfer_0656 Acidaminococcus fermentans DSM 20731 polysaccharide pyruvyl transferase CsaB YP_003398365.1 764482 D 591001 CDS YP_003398366.1 284048027 8737125 765633..766319 1 NC_013740.1 KEGG: eat:EAT1b_0892 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; cell division ATP-binding protein FtsE 766319 8737125 Acfer_0657 Acidaminococcus fermentans DSM 20731 cell division ATP-binding protein FtsE YP_003398366.1 765633 D 591001 CDS YP_003398367.1 284048028 8737126 766309..767196 1 NC_013740.1 PFAM: protein of unknown function DUF214; KEGG: tpd:Teth39_0564 hypothetical protein; hypothetical protein 767196 8737126 Acfer_0658 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398367.1 766309 D 591001 CDS YP_003398368.1 284048029 8737127 767209..768342 1 NC_013740.1 PFAM: Peptidase M23; KEGG: dae:Dtox_3964 peptidase M23; peptidase M23 768342 8737127 Acfer_0659 Acidaminococcus fermentans DSM 20731 peptidase M23 YP_003398368.1 767209 D 591001 CDS YP_003398369.1 284048030 8737128 768506..769654 1 NC_013740.1 KEGG: tye:THEYE_A1481 carboxy-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 769654 8737128 Acfer_0660 Acidaminococcus fermentans DSM 20731 carboxyl-terminal protease YP_003398369.1 768506 D 591001 CDS YP_003398370.1 284048031 8737129 769673..771007 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: glo:Glov_0565 multi-sensor hybrid histidine kinase; histidine kinase 771007 8737129 Acfer_0661 Acidaminococcus fermentans DSM 20731 histidine kinase YP_003398370.1 769673 D 591001 CDS YP_003398371.1 284048032 8737130 771028..771873 1 NC_013740.1 KEGG: shi:Shel_21620 apurinic endonuclease APN1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; apurinic endonuclease Apn1 771873 8737130 Acfer_0662 Acidaminococcus fermentans DSM 20731 apurinic endonuclease Apn1 YP_003398371.1 771028 D 591001 CDS YP_003398372.1 284048033 8737131 771870..772472 1 NC_013740.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; KEGG: cac:CAC2928 hypothetical protein; proton-coupled thiamine transporter YuaJ 772472 8737131 Acfer_0663 Acidaminococcus fermentans DSM 20731 proton-coupled thiamine transporter YuaJ YP_003398372.1 771870 D 591001 CDS YP_003398373.1 284048034 8737132 772637..773170 1 NC_013740.1 TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; KEGG: dae:Dtox_2400 translation initiation factor IF-3; translation initiation factor IF-3 773170 8737132 Acfer_0664 Acidaminococcus fermentans DSM 20731 translation initiation factor IF-3 YP_003398373.1 772637 D 591001 CDS YP_003398374.1 284048035 8737133 773189..773386 1 NC_013740.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: ter:Tery_1881 50S ribosomal protein L35; 50S ribosomal protein L35 773386 8737133 Acfer_0665 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L35 YP_003398374.1 773189 D 591001 CDS YP_003398375.1 284048036 8737134 773432..773785 1 NC_013740.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: cce:Ccel_1313 ribosomal protein L20; 50S ribosomal protein L20 773785 8737134 Acfer_0666 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L20 YP_003398375.1 773432 D 591001 CDS YP_003398376.1 284048037 8737135 773884..774249 1 NC_013740.1 PFAM: protein of unknown function UPF0150; HicB family protein; KEGG: lbu:LBUL_0254 hypothetical protein; hypothetical protein 774249 8737135 Acfer_0667 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398376.1 773884 D 591001 CDS YP_003398377.1 284048038 8737136 774399..774665 1 NC_013740.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: gur:Gura_1905 30S ribosomal protein S15; 30S ribosomal protein S15 774665 8737136 Acfer_0668 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S15 YP_003398377.1 774399 D 591001 CDS YP_003398378.1 284048039 8737142 775416..776684 1 NC_013740.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: drm:Dred_1317 uracil transporter; uracil-xanthine permease 776684 8737142 Acfer_0669 Acidaminococcus fermentans DSM 20731 uracil-xanthine permease YP_003398378.1 775416 D 591001 CDS YP_003398379.1 284048040 8737143 776763..778307 1 NC_013740.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; tRNA methyl transferase-like; KEGG: cbe:Cbei_0332 GMP synthase; GMP synthase 778307 8737143 Acfer_0670 Acidaminococcus fermentans DSM 20731 GMP synthase YP_003398379.1 776763 D 591001 CDS YP_003398380.1 284048041 8737144 778652..778921 1 NC_013740.1 KEGG: lhe:lhv_0422 hypothetical protein; hypothetical protein 778921 8737144 Acfer_0671 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398380.1 778652 D 591001 CDS YP_003398381.1 284048042 8737145 778905..779105 1 NC_013740.1 KEGG: lga:LGAS_0243 hypothetical protein; hypothetical protein 779105 8737145 Acfer_0672 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398381.1 778905 D 591001 CDS YP_003398382.1 284048043 8737146 779651..780685 1 NC_013740.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ere:EUBREC_2364 low specificity L-threonine aldolase; aromatic amino acid beta-eliminating lyase/threonine aldolase 780685 8737146 Acfer_0673 Acidaminococcus fermentans DSM 20731 aromatic amino acid beta-eliminating lyase/threonine aldolase YP_003398382.1 779651 D 591001 CDS YP_003398383.1 284048044 8737147 781185..781508 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: shi:Shel_16640 hypothetical protein; ArsR family transcriptional regulator 781508 8737147 Acfer_0674 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003398383.1 781185 D 591001 CDS YP_003398384.1 284048045 8737148 781505..782089 1 NC_013740.1 PFAM: Chromate transporter; KEGG: ere:EUBREC_3626 chromate transport protein; chromate transporter 782089 8737148 Acfer_0675 Acidaminococcus fermentans DSM 20731 chromate transporter YP_003398384.1 781505 D 591001 CDS YP_003398385.1 284048046 8737149 782086..782649 1 NC_013740.1 PFAM: Chromate transporter; KEGG: ere:EUBREC_3625 chromate transport protein; chromate transporter 782649 8737149 Acfer_0676 Acidaminococcus fermentans DSM 20731 chromate transporter YP_003398385.1 782086 D 591001 CDS YP_003398386.1 284048047 8737150 complement(782698..784047) 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ere:EUBREC_3350 hypothetical protein; MATE efflux family protein 784047 8737150 Acfer_0677 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003398386.1 782698 R 591001 CDS YP_003398387.1 284048048 8737151 complement(784052..785197) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: Clan MH, family M20, peptidase T-like metallopeptidase; amidohydrolase 785197 8737151 Acfer_0678 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003398387.1 784052 R 591001 CDS YP_003398388.1 284048049 8737154 785846..786640 1 NC_013740.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: dhd:Dhaf_3920 5-amino-6-(5- phosphoribosylamino)uracil reductase; bifunctional deaminase-reductase domain-containing protein 786640 8737154 Acfer_0681 Acidaminococcus fermentans DSM 20731 bifunctional deaminase-reductase domain-containing protein YP_003398388.1 785846 D 591001 CDS YP_003398389.1 284048050 8737155 786907..788541 1 NC_013740.1 PFAM: Methyltransferase type 12; KEGG: ckr:CKR_2211 hypothetical protein; type 12 methyltransferase 788541 8737155 Acfer_0682 Acidaminococcus fermentans DSM 20731 type 12 methyltransferase YP_003398389.1 786907 D 591001 CDS YP_003398390.1 284048051 8737156 789014..791524 1 NC_013740.1 PFAM: ABC transporter related; KEGG: ele:Elen_1467 ABC transporter related; ABC transporter 791524 8737156 Acfer_0683 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398390.1 789014 D 591001 CDS YP_003398391.1 284048052 8737157 791634..792587 1 NC_013740.1 PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; KEGG: ctc:CTC01874 hypothetical protein; hypothetical protein 792587 8737157 Acfer_0684 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398391.1 791634 D 591001 CDS YP_003398392.1 284048053 8737158 793132..793524 1 NC_013740.1 KEGG: rca:Rcas_1163 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; SMART: PAS domain containing protein; putative PAS/PAC sensor protein 793524 8737158 Acfer_0685 Acidaminococcus fermentans DSM 20731 putative PAS/PAC sensor protein YP_003398392.1 793132 D 591001 CDS YP_003398393.1 284048054 8737159 793521..796028 1 NC_013740.1 PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; KEGG: ele:Elen_1086 diguanylate cyclase/phosphodiesterase; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 796028 8737159 Acfer_0686 Acidaminococcus fermentans DSM 20731 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_003398393.1 793521 D 591001 CDS YP_003398394.1 284048055 8737160 796146..796580 1 NC_013740.1 PFAM: protein of unknown function UPF0074; KEGG: mpe:MYPE3120 hypothetical protein; AsnC family transcriptional regulator 796580 8737160 Acfer_0687 Acidaminococcus fermentans DSM 20731 AsnC family transcriptional regulator YP_003398394.1 796146 D 591001 CDS YP_003398395.1 284048056 8737162 796825..797310 1 NC_013740.1 PFAM: thioesterase superfamily protein; KEGG: aba:Acid345_1409 4-hydroxybenzoyl-CoA thioesterase; thioesterase superfamily protein 797310 8737162 Acfer_0688 Acidaminococcus fermentans DSM 20731 thioesterase superfamily protein YP_003398395.1 796825 D 591001 CDS YP_003398396.1 284048057 8737163 797307..797846 1 NC_013740.1 hypothetical protein 797846 8737163 Acfer_0689 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398396.1 797307 D 591001 CDS YP_003398397.1 284048058 8737164 797839..798483 1 NC_013740.1 PFAM: protein of unknown function DUF129; KEGG: tte:TTE2365 hypothetical protein; hypothetical protein 798483 8737164 Acfer_0690 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398397.1 797839 D 591001 CDS YP_003398398.1 284048059 8737165 798881..799474 1 NC_013740.1 KEGG: eat:EAT1b_2634 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 799474 8737165 Acfer_0691 Acidaminococcus fermentans DSM 20731 RdgB/HAM1 family non-canonical purine NTP pyrophosphatase YP_003398398.1 798881 D 591001 CDS YP_003398399.1 284048060 8737166 799471..799953 1 NC_013740.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: sth:STH345 putative phosphoesterase; phosphodiesterase, MJ0936 family 799953 8737166 Acfer_0692 Acidaminococcus fermentans DSM 20731 phosphodiesterase, MJ0936 family YP_003398399.1 799471 D 591001 CDS YP_003398400.1 284048061 8737167 799969..801219 1 NC_013740.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: chy:CHY_1369 NAD-dependent malic enzyme; Malate dehydrogenase (oxaloacetate- decarboxylating) 801219 8737167 Acfer_0693 Acidaminococcus fermentans DSM 20731 Malate dehydrogenase (oxaloacetate- decarboxylating) YP_003398400.1 799969 D 591001 CDS YP_003398401.1 284048062 8737168 801339..802160 1 NC_013740.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: tpd:Teth39_1334 YaeC family lipoprotein; lipoprotein 802160 8737168 Acfer_0694 Acidaminococcus fermentans DSM 20731 lipoprotein YP_003398401.1 801339 D 591001 CDS YP_003398402.1 284048063 8737169 802235..802507 1 NC_013740.1 KEGG: sgo:SGO_0562 helix-turn-helix domain- containing protein; XRE family plasmid maintenance system antidote protein 802507 8737169 Acfer_0695 Acidaminococcus fermentans DSM 20731 XRE family plasmid maintenance system antidote protein YP_003398402.1 802235 D 591001 CDS YP_003398403.1 284048064 8737170 802733..807667 1 NC_013740.1 PFAM: cytidylyltransferase; metal-dependent phosphohydrolase HD sub domain; KEGG: aoe:Clos_2711 cytidyltransferase-like protein; metal dependent phosphohydrolase 807667 8737170 Acfer_0696 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398403.1 802733 D 591001 CDS YP_003398404.1 284048065 8737171 807696..808682 1 NC_013740.1 KEGG: aoe:Clos_2712 malate/lactate dehydrogenase; malate/lactate dehydrogenase 808682 8737171 Acfer_0697 Acidaminococcus fermentans DSM 20731 malate/lactate dehydrogenase YP_003398404.1 807696 D 591001 CDS YP_003398405.1 284048066 8737172 808710..809795 1 NC_013740.1 KEGG: aoe:Clos_2713 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 809795 8737172 Acfer_0698 Acidaminococcus fermentans DSM 20731 NADPH-dependent FMN reductase YP_003398405.1 808710 D 591001 CDS YP_003398406.1 284048067 8737173 809965..811377 1 NC_013740.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; KEGG: bay:RBAM_007730 YflS; anion transporter 811377 8737173 Acfer_0699 Acidaminococcus fermentans DSM 20731 anion transporter YP_003398406.1 809965 D 591001 CDS YP_003398407.1 284048068 8737174 811453..812913 1 NC_013740.1 KEGG: eel:EUBELI_00163 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 812913 8737174 Acfer_0700 Acidaminococcus fermentans DSM 20731 nicotinate phosphoribosyltransferase YP_003398407.1 811453 D 591001 CDS YP_003398408.1 284048069 8737175 812934..814067 1 NC_013740.1 KEGG: eel:EUBELI_00738 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase 814067 8737175 Acfer_0701 Acidaminococcus fermentans DSM 20731 oxygen-independent coproporphyrinogen III oxidase YP_003398408.1 812934 D 591001 CDS YP_003398409.1 284048070 8737176 814177..815217 1 NC_013740.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: pth:PTH_0875 transcriptional regulator of heat shock gene; heat-inducible transcription repressor HrcA 815217 8737176 Acfer_0702 Acidaminococcus fermentans DSM 20731 heat-inducible transcription repressor HrcA YP_003398409.1 814177 D 591001 CDS YP_003398410.1 284048071 8737177 815228..815845 1 NC_013740.1 PFAM: GrpE protein; KEGG: bha:BH1345 heat-shock protein (activation of DnaK); GrpE protein HSP-70 cofactor 815845 8737177 Acfer_0703 Acidaminococcus fermentans DSM 20731 GrpE protein HSP-70 cofactor YP_003398410.1 815228 D 591001 CDS YP_003398411.1 284048072 8737178 815898..817751 1 NC_013740.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: mta:Moth_0585 molecular chaperone DnaK; chaperone protein DnaK 817751 8737178 Acfer_0704 Acidaminococcus fermentans DSM 20731 chaperone protein DnaK YP_003398411.1 815898 D 591001 CDS YP_003398412.1 284048073 8737179 817774..818943 1 NC_013740.1 KEGG: hor:Hore_12790 chaperone protein DnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ 818943 8737179 Acfer_0705 Acidaminococcus fermentans DSM 20731 chaperone protein DnaJ YP_003398412.1 817774 D 591001 CDS YP_003398413.1 284048074 8737180 819180..820949 1 NC_013740.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; KEGG: avn:Avin_37880 hypothetical protein; Polypeptide-transport-associated domain protein ShlB-type 820949 8737180 Acfer_0706 Acidaminococcus fermentans DSM 20731 Polypeptide-transport-associated domain protein ShlB-type YP_003398413.1 819180 D 591001 CDS YP_003398414.1 284048075 8737181 820977..823049 1 NC_013740.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; KEGG: cch:Cag_1053 filamentous haemagglutinin-like; filamentous hemagglutinin family outer membrane protein 823049 8737181 Acfer_0707 Acidaminococcus fermentans DSM 20731 filamentous hemagglutinin family outer membrane protein YP_003398414.1 820977 D 591001 CDS YP_003398415.1 284048076 8737182 823169..827779 1 NC_013740.1 KEGG: rce:RC1_0943 the GLUG motif domain protein, putative; hypothetical protein 827779 8737182 Acfer_0708 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398415.1 823169 D 591001 CDS YP_003398416.1 284048077 8737183 827887..828828 1 NC_013740.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; KEGG: dsy:DSY3128 ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase 828828 8737183 Acfer_0709 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L11 methyltransferase YP_003398416.1 827887 D 591001 CDS YP_003398417.1 284048078 8737184 828830..829564 1 NC_013740.1 PFAM: protein of unknown function DUF558; KEGG: cth:Cthe_1319 hypothetical protein; hypothetical protein 829564 8737184 Acfer_0710 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398417.1 828830 D 591001 CDS YP_003398418.1 284048079 8737185 829577..830890 1 NC_013740.1 KEGG: drm:Dred_2492 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB- like tRNA modifying enzyme; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 830890 8737185 Acfer_0711 Acidaminococcus fermentans DSM 20731 MiaB family RNA modification protein YP_003398418.1 829577 D 591001 CDS YP_003398419.1 284048080 8737186 830918..831253 1 NC_013740.1 PFAM: histidine triad (HIT) protein; KEGG: cpf:CPF_2281 HIT family protein; histidine triad (HIT) protein 831253 8737186 Acfer_0712 Acidaminococcus fermentans DSM 20731 histidine triad (HIT) protein YP_003398419.1 830918 D 591001 CDS YP_003398420.1 284048081 8737187 831362..831538 1 NC_013740.1 TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: sth:STH514 30S ribosomal protein S21; 30S ribosomal protein S21 831538 8737187 Acfer_0713 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S21 YP_003398420.1 831362 D 591001 CDS YP_003398421.1 284048082 8737188 831570..832019 1 NC_013740.1 PFAM: Protein of unknown function; KEGG: hmo:HM1_2443 GatB/YqeY domain protein; hypothetical protein 832019 8737188 Acfer_0714 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398421.1 831570 D 591001 CDS YP_003398422.1 284048083 8737189 832108..833292 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: cac:CAC2832 aspartate aminotransferase; class I and II aminotransferase 833292 8737189 Acfer_0715 Acidaminococcus fermentans DSM 20731 class I and II aminotransferase YP_003398422.1 832108 D 591001 CDS YP_003398423.1 284048084 8737190 833432..834301 1 NC_013740.1 PFAM: peptidase M48 Ste24p; KEGG: hypothetical protein LOC100231385 ; K06013 STE24 endopeptidase; peptidase M48 Ste24p 834301 8737190 Acfer_0716 Acidaminococcus fermentans DSM 20731 peptidase M48 Ste24p YP_003398423.1 833432 D 591001 CDS YP_003398424.1 284048085 8737191 834536..835015 1 NC_013740.1 PFAM: transcription factor CarD; KEGG: aoe:Clos_0460 CarD family transcriptional regulator; BadM/Rrf2 family transcriptional regulator 835015 8737191 Acfer_0717 Acidaminococcus fermentans DSM 20731 BadM/Rrf2 family transcriptional regulator YP_003398424.1 834536 D 591001 CDS YP_003398425.1 284048086 8737192 835140..836249 1 NC_013740.1 PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; KEGG: hmo:HM1_1353 pin domain protein; PilT protein domain-containing protein 836249 8737192 Acfer_0718 Acidaminococcus fermentans DSM 20731 PilT protein domain-containing protein YP_003398425.1 835140 D 591001 CDS YP_003398426.1 284048087 8737193 836266..837453 1 NC_013740.1 TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase; PFAM: MECDP-synthase; 4-diphosphocytidyl-2C-methyl- D-erythritol synthase; KEGG: dau:Daud_0186 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 837453 8737193 Acfer_0719 Acidaminococcus fermentans DSM 20731 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_003398426.1 836266 D 591001 CDS YP_003398427.1 284048088 8737194 837476..838948 1 NC_013740.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: drm:Dred_0191 glutamyl-tRNA synthetase; glutamyl-tRNA synthetase 838948 8737194 Acfer_0720 Acidaminococcus fermentans DSM 20731 glutamyl-tRNA synthetase YP_003398427.1 837476 D 591001 CDS YP_003398428.1 284048089 8737195 838964..840409 1 NC_013740.1 KEGG: pth:PTH_0295 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase 840409 8737195 Acfer_0721 Acidaminococcus fermentans DSM 20731 cysteinyl-tRNA synthetase YP_003398428.1 838964 D 591001 CDS YP_003398429.1 284048090 8737196 840406..840879 1 NC_013740.1 PFAM: ribonuclease III; SMART: ribonuclease III; KEGG: tte:TTE2314 hypothetical protein; ribonuclease III 840879 8737196 Acfer_0722 Acidaminococcus fermentans DSM 20731 ribonuclease III YP_003398429.1 840406 D 591001 CDS YP_003398430.1 284048091 8737197 840876..841583 1 NC_013740.1 KEGG: chy:CHY_2336 FAD-dependent thymidylate synthase; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; thymidylate synthase, flavin-dependent 841583 8737197 Acfer_0723 Acidaminococcus fermentans DSM 20731 thymidylate synthase, flavin-dependent YP_003398430.1 840876 D 591001 CDS YP_003398431.1 284048092 8737198 841590..842273 1 NC_013740.1 hypothetical protein 842273 8737198 Acfer_0724 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398431.1 841590 D 591001 CDS YP_003398432.1 284048093 8737203 842841..843362 1 NC_013740.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: ssa:SSA_0780 acid phosphatase; phosphoesterase PA-phosphatase-like protein 843362 8737203 Acfer_0725 Acidaminococcus fermentans DSM 20731 phosphoesterase PA-phosphatase-like protein YP_003398432.1 842841 D 591001 CDS YP_003398433.1 284048094 8737204 844595..846046 1 NC_013740.1 KEGG: drm:Dred_3137 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: sugar transferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 846046 8737204 Acfer_0726 Acidaminococcus fermentans DSM 20731 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_003398433.1 844595 D 591001 CDS YP_003398434.1 284048095 8737205 846262..846459 1 NC_013740.1 hypothetical protein 846459 8737205 Acfer_0727 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398434.1 846262 D 591001 CDS YP_003398435.1 284048096 8737206 846474..847112 1 NC_013740.1 KEGG: pth:PTH_0148 hypothetical protein; hypothetical protein 847112 8737206 Acfer_0728 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398435.1 846474 D 591001 CDS YP_003398436.1 284048097 8737208 848046..848261 1 NC_013740.1 KEGG: gka:GK1394 hypothetical protein; hypothetical protein 848261 8737208 Acfer_0730 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398436.1 848046 D 591001 CDS YP_003398437.1 284048098 8737209 848765..849886 1 NC_013740.1 KEGG: ere:EUBREC_2761 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; UDP-galactopyranose mutase 849886 8737209 Acfer_0731 Acidaminococcus fermentans DSM 20731 UDP-galactopyranose mutase YP_003398437.1 848765 D 591001 CDS YP_003398438.1 284048099 8737210 850155..850508 1 NC_013740.1 PFAM: S23 ribosomal protein; KEGG: fjo:Fjoh_0743 S23 ribosomal protein; S23 ribosomal protein 850508 8737210 Acfer_0732 Acidaminococcus fermentans DSM 20731 S23 ribosomal protein YP_003398438.1 850155 D 591001 CDS YP_003398439.1 284048100 8737211 850843..851616 1 NC_013740.1 KEGG: cby:CLM_3048 exopolysaccharide biosynthesis protein; exopolysaccharide biosynthesis protein 851616 8737211 Acfer_0733 Acidaminococcus fermentans DSM 20731 exopolysaccharide biosynthesis protein YP_003398439.1 850843 D 591001 CDS YP_003398440.1 284048101 8737212 complement(851776..852270) 1 NC_013740.1 KEGG: cbe:Cbei_1670 hypothetical protein; hypothetical protein 852270 8737212 Acfer_0734 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398440.1 851776 R 591001 CDS YP_003398441.1 284048102 8737213 complement(852317..852685) 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 852685 8737213 Acfer_0735 Acidaminococcus fermentans DSM 20731 putative transposase YP_003398441.1 852317 R 591001 CDS YP_003398442.1 284048103 8737214 853002..854318 1 NC_013740.1 KEGG: cth:Cthe_2132 abortive infection protein, putative; abortive infection protein 854318 8737214 Acfer_0736 Acidaminococcus fermentans DSM 20731 abortive infection protein YP_003398442.1 853002 D 591001 CDS YP_003398443.1 284048104 8737215 854476..854994 1 NC_013740.1 KEGG: cth:Cthe_2133 hypothetical protein; hypothetical protein 854994 8737215 Acfer_0737 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398443.1 854476 D 591001 CDS YP_003398444.1 284048105 8737216 855520..856437 1 NC_013740.1 KEGG: ere:EUBREC_2750 hypothetical protein; hypothetical protein 856437 8737216 Acfer_0738 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398444.1 855520 D 591001 CDS YP_003398445.1 284048106 8737217 856667..857782 1 NC_013740.1 hypothetical protein 857782 8737217 Acfer_0739 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398445.1 856667 D 591001 CDS YP_003398446.1 284048107 8737218 complement(858004..859002) 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 859002 8737218 Acfer_0740 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003398446.1 858004 R 591001 CDS YP_003398447.1 284048108 8737219 complement(859049..859417) 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 859417 8737219 Acfer_0741 Acidaminococcus fermentans DSM 20731 putative transposase YP_003398447.1 859049 R 591001 CDS YP_003398448.1 284048109 8737221 860269..861132 1 NC_013740.1 PFAM: LicD family protein; KEGG: spp:SPP_1311 phosphotransferase; LicD family protein 861132 8737221 Acfer_0743 Acidaminococcus fermentans DSM 20731 LicD family protein YP_003398448.1 860269 D 591001 CDS YP_003398449.1 284048110 8737222 861129..861851 1 NC_013740.1 PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: bvu:BVU_2951 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 861851 8737222 Acfer_0744 Acidaminococcus fermentans DSM 20731 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_003398449.1 861129 D 591001 CDS YP_003398450.1 284048111 8737223 861866..862915 1 NC_013740.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: bvu:BVU_2952 putative epimerase/dehydratase; NAD-dependent epimerase/dehydratase 862915 8737223 Acfer_0745 Acidaminococcus fermentans DSM 20731 NAD-dependent epimerase/dehydratase YP_003398450.1 861866 D 591001 CDS YP_003398451.1 284048112 8737224 862980..863954 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: ccu:Ccur_05920 glycosyl transferase; family 2 glycosyl transferase 863954 8737224 Acfer_0746 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398451.1 862980 D 591001 CDS YP_003398452.1 284048113 8737225 864027..865010 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: efa:EF2170 glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 865010 8737225 Acfer_0747 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398452.1 864027 D 591001 CDS YP_003398453.1 284048114 8737226 865205..866179 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: bce:BC5267 glycosyltransferase; family 2 glycosyl transferase 866179 8737226 Acfer_0748 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398453.1 865205 D 591001 CDS YP_003398454.1 284048115 8737228 867763..869265 1 NC_013740.1 PFAM: polysaccharide biosynthesis protein; KEGG: lsp:Bsph_1637 membrane protein involved in the export of O-antigen and teichoic acid; polysaccharide biosynthesis protein 869265 8737228 Acfer_0750 Acidaminococcus fermentans DSM 20731 polysaccharide biosynthesis protein YP_003398454.1 867763 D 591001 CDS YP_003398455.1 284048116 8737229 869846..871048 1 NC_013740.1 KEGG: lfe:LAF_0101 hypothetical protein; hypothetical protein 871048 8737229 Acfer_0751 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398455.1 869846 D 591001 CDS YP_003398456.1 284048117 8737230 871051..871605 1 NC_013740.1 hypothetical protein 871605 8737230 Acfer_0752 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398456.1 871051 D 591001 CDS YP_003398457.1 284048118 8737232 872478..872777 1 NC_013740.1 PFAM: plasmid maintenance system killer; KEGG: swo:Swol_0482 hypothetical protein; plasmid maintenance system killer protein 872777 8737232 Acfer_0754 Acidaminococcus fermentans DSM 20731 plasmid maintenance system killer protein YP_003398457.1 872478 D 591001 CDS YP_003398458.1 284048119 8737233 872794..873846 1 NC_013740.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; KEGG: eel:EUBELI_00210 hypothetical protein; XRE family plasmid maintenance system antidote protein 873846 8737233 Acfer_0755 Acidaminococcus fermentans DSM 20731 XRE family plasmid maintenance system antidote protein YP_003398458.1 872794 D 591001 CDS YP_003398459.1 284048120 8737234 874496..876682 1 NC_013740.1 KEGG: ere:EUBREC_2497 putative helicase; TIGRFAM: CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; metal- dependent phosphohydrolase HD sub domain; SMART: DEAD-like helicase; metal dependent phosphohydrolase 876682 8737234 Acfer_0756 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398459.1 874496 D 591001 CDS YP_003398460.1 284048121 8737235 876714..877367 1 NC_013740.1 TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein CT1134; KEGG: ere:EUBREC_2494 hypothetical protein; CRISPR-associated protein Cas5 family 877367 8737235 Acfer_0757 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein Cas5 family YP_003398460.1 876714 D 591001 CDS YP_003398461.1 284048122 8737236 877364..879139 1 NC_013740.1 TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133; KEGG: ere:EUBREC_2493 hypothetical protein; CRISPR-associated protein, Csd1 family 879139 8737236 Acfer_0758 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein, Csd1 family YP_003398461.1 877364 D 591001 CDS YP_003398462.1 284048123 8737237 879139..880035 1 NC_013740.1 TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801; KEGG: ere:EUBREC_2492 hypothetical protein; CRISPR-associated protein, Csd2 family 880035 8737237 Acfer_0759 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein, Csd2 family YP_003398462.1 879139 D 591001 CDS YP_003398463.1 284048124 8737238 880032..880706 1 NC_013740.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; KEGG: ere:EUBREC_2491 hypothetical protein; CRISPR-associated protein Cas4 880706 8737238 Acfer_0760 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein Cas4 YP_003398463.1 880032 D 591001 CDS YP_003398464.1 284048125 8737239 880703..881734 1 NC_013740.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: bha:BH0341 hypothetical protein; CRISPR-associated protein Cas1 881734 8737239 Acfer_0761 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein Cas1 YP_003398464.1 880703 D 591001 CDS YP_003398465.1 284048126 8737240 881739..882029 1 NC_013740.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: swo:Swol_0481 hypothetical protein; CRISPR-associated protein Cas2 882029 8737240 Acfer_0762 Acidaminococcus fermentans DSM 20731 CRISPR-associated protein Cas2 YP_003398465.1 881739 D 591001 CDS YP_003398466.1 284048127 8737241 886449..887618 1 NC_013740.1 KEGG: eat:EAT1b_1148 hypothetical protein; hypothetical protein 887618 8737241 Acfer_0763 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398466.1 886449 D 591001 CDS YP_003398467.1 284048128 8737242 887633..888793 1 NC_013740.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cdf:CD2822 putative peptidase; peptidase M20 888793 8737242 Acfer_0764 Acidaminococcus fermentans DSM 20731 peptidase M20 YP_003398467.1 887633 D 591001 CDS YP_003398468.1 284048129 8737243 888804..888923 1 NC_013740.1 hypothetical protein 888923 8737243 Acfer_0765 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398468.1 888804 D 591001 CDS YP_003398469.1 284048130 8737244 889017..889598 1 NC_013740.1 PFAM: NADPH-dependent FMN reductase; KEGG: eel:EUBELI_00462 hypothetical protein; NADPH-dependent FMN reductase 889598 8737244 Acfer_0766 Acidaminococcus fermentans DSM 20731 NADPH-dependent FMN reductase YP_003398469.1 889017 D 591001 CDS YP_003398470.1 284048131 8737246 889903..891513 1 NC_013740.1 TIGRFAM: peptide chain release factor 3; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: hmo:HM1_1671 peptide chain release factor 3; peptide chain release factor 3 891513 8737246 Acfer_0767 Acidaminococcus fermentans DSM 20731 peptide chain release factor 3 YP_003398470.1 889903 D 591001 CDS YP_003398471.1 284048132 8737247 891642..892385 1 NC_013740.1 KEGG: mta:Moth_2365 N-acetylmannosaminyltransferase; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase 892385 8737247 Acfer_0768 Acidaminococcus fermentans DSM 20731 WecB/TagA/CpsF family glycosyl transferase YP_003398471.1 891642 D 591001 CDS YP_003398472.1 284048133 8737248 892476..893123 1 NC_013740.1 KEGG: dae:Dtox_2946 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 893123 8737248 Acfer_0769 Acidaminococcus fermentans DSM 20731 phosphatidylserine decarboxylase YP_003398472.1 892476 D 591001 CDS YP_003398473.1 284048134 8737249 893120..893809 1 NC_013740.1 TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: wsu:WS0623 phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase 893809 8737249 Acfer_0770 Acidaminococcus fermentans DSM 20731 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_003398473.1 893120 D 591001 CDS YP_003398474.1 284048135 8737250 893831..895117 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: dhd:Dhaf_0177 glycosyl transferase family 2; family 2 glycosyl transferase 895117 8737250 Acfer_0771 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398474.1 893831 D 591001 CDS YP_003398475.1 284048136 8737251 895801..898560 1 NC_013740.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cpy:Cphy_0543 magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 898560 8737251 Acfer_0772 Acidaminococcus fermentans DSM 20731 magnesium-translocating P-type ATPase YP_003398475.1 895801 D 591001 CDS YP_003398476.1 284048137 8737252 898663..898788 1 NC_013740.1 hypothetical protein 898788 8737252 Acfer_0773 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398476.1 898663 D 591001 CDS YP_003398477.1 284048138 8737253 898888..900132 1 NC_013740.1 PFAM: Amino acid transporter transmembrane; KEGG: pag:PLES_12131 putative aromatic amino acid transporter; Amino acid transporter transmembrane 900132 8737253 Acfer_0774 Acidaminococcus fermentans DSM 20731 Amino acid transporter transmembrane YP_003398477.1 898888 D 591001 CDS YP_003398478.1 284048139 8737254 complement(900438..901412) 1 NC_013740.1 PFAM: Bile acid:sodium symporter; KEGG: oih:OB0994 sodium-dependent transporter; bile acid:sodium symporter 901412 8737254 Acfer_0775 Acidaminococcus fermentans DSM 20731 bile acid:sodium symporter YP_003398478.1 900438 R 591001 CDS YP_003398479.1 284048140 8737255 complement(901417..902268) 1 NC_013740.1 KEGG: cth:Cthe_0901 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; pantoate/beta-alanine ligase 902268 8737255 Acfer_0776 Acidaminococcus fermentans DSM 20731 pantoate/beta-alanine ligase YP_003398479.1 901417 R 591001 CDS YP_003398480.1 284048141 8737256 902819..903544 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cjr:CJE1000 amino acid ABC transporter, ATP- binding protein PEB1; ABC transporter 903544 8737256 Acfer_0777 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398480.1 902819 D 591001 CDS YP_003398481.1 284048142 8737257 903601..904479 1 NC_013740.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: cbe:Cbei_4172 extracellular solute-binding protein; family 3 extracellular solute-binding protein 904479 8737257 Acfer_0778 Acidaminococcus fermentans DSM 20731 family 3 extracellular solute-binding protein YP_003398481.1 903601 D 591001 CDS YP_003398482.1 284048143 8737258 904577..905272 1 NC_013740.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cju:C8J_0857 amino acid ABC transporter permease; polar amino acid ABC transporter inner membrane subunit 905272 8737258 Acfer_0779 Acidaminococcus fermentans DSM 20731 polar amino acid ABC transporter inner membrane subunit YP_003398482.1 904577 D 591001 CDS YP_003398483.1 284048144 8737259 905286..906077 1 NC_013740.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4170 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter inner membrane subunit 906077 8737259 Acfer_0780 Acidaminococcus fermentans DSM 20731 polar amino acid ABC transporter inner membrane subunit YP_003398483.1 905286 D 591001 CDS YP_003398484.1 284048145 8737261 906313..907125 1 NC_013740.1 PFAM: nitroreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cbe:Cbei_3948 nitroreductase; nitroreductase 907125 8737261 Acfer_0781 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003398484.1 906313 D 591001 CDS YP_003398485.1 284048146 8737262 907142..907582 1 NC_013740.1 KEGG: llm:llmg_2143 putative 20-kDa protein; hypothetical protein 907582 8737262 Acfer_0782 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398485.1 907142 D 591001 CDS YP_003398486.1 284048147 8737263 907776..909257 1 NC_013740.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: cpy:Cphy_2148 DNA-repair protein; UMUC domain-containing protein DNA-repair protein 909257 8737263 Acfer_0783 Acidaminococcus fermentans DSM 20731 UMUC domain-containing protein DNA-repair protein YP_003398486.1 907776 D 591001 CDS YP_003398487.1 284048148 8737264 909254..909457 1 NC_013740.1 KEGG: blj:BLD_0870 hypothetical protein; hypothetical protein 909457 8737264 Acfer_0784 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398487.1 909254 D 591001 CDS YP_003398488.1 284048149 8737265 909573..910499 1 NC_013740.1 KEGG: apa:APP7_0243 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; N-acetyl-gamma-glutamyl-phosphate reductase 910499 8737265 Acfer_0785 Acidaminococcus fermentans DSM 20731 N-acetyl-gamma-glutamyl-phosphate reductase YP_003398488.1 909573 D 591001 CDS YP_003398489.1 284048150 8737266 910613..912001 1 NC_013740.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NUDIX hydrolase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bpe:BP0217 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 912001 8737266 Acfer_0786 Acidaminococcus fermentans DSM 20731 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_003398489.1 910613 D 591001 CDS YP_003398490.1 284048151 8737267 911998..912690 1 NC_013740.1 PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: cbe:Cbei_2277 CRP/FNR family transcriptional regulator; CarD family transcriptional regulator 912690 8737267 Acfer_0787 Acidaminococcus fermentans DSM 20731 CarD family transcriptional regulator YP_003398490.1 911998 D 591001 CDS YP_003398491.1 284048152 8737268 912864..913595 1 NC_013740.1 KEGG: efa:EF1612 pyruvate formate-lyase activating enzyme; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme 913595 8737268 Acfer_0788 Acidaminococcus fermentans DSM 20731 pyruvate formate-lyase activating enzyme YP_003398491.1 912864 D 591001 CDS YP_003398492.1 284048153 8737269 913707..915986 1 NC_013740.1 KEGG: eel:EUBELI_20055 formate C-acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C- acetyltransferase glycine radical; formate acetyltransferase 915986 8737269 Acfer_0789 Acidaminococcus fermentans DSM 20731 formate acetyltransferase YP_003398492.1 913707 D 591001 CDS YP_003398493.1 284048154 8737270 916256..917077 1 NC_013740.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bbr:BB4169 hypothetical protein; lipoprotein 917077 8737270 Acfer_0790 Acidaminococcus fermentans DSM 20731 lipoprotein YP_003398493.1 916256 D 591001 CDS YP_003398494.1 284048155 8737271 917099..918430 1 NC_013740.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: vap:Vapar_2924 peptidase M20; Gly-Xaa carboxypeptidase 918430 8737271 Acfer_0791 Acidaminococcus fermentans DSM 20731 Gly-Xaa carboxypeptidase YP_003398494.1 917099 D 591001 CDS YP_003398495.1 284048156 8737272 918432..919316 1 NC_013740.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: bbe:BBR47_40890 pseudouridine synthase; RluA family pseudouridine synthase 919316 8737272 Acfer_0792 Acidaminococcus fermentans DSM 20731 RluA family pseudouridine synthase YP_003398495.1 918432 D 591001 CDS YP_003398496.1 284048157 8737273 919472..920122 1 NC_013740.1 KEGG: scl:sce0884 hypothetical protein; hypothetical protein 920122 8737273 Acfer_0793 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398496.1 919472 D 591001 CDS YP_003398497.1 284048158 8737274 920569..921432 1 NC_013740.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: dvl:Dvul_2201 pyridoxamine kinase; Phosphomethylpyrimidine kinase type-1 921432 8737274 Acfer_0794 Acidaminococcus fermentans DSM 20731 Phosphomethylpyrimidine kinase type-1 YP_003398497.1 920569 D 591001 CDS YP_003398498.1 284048159 8737275 921574..923145 1 NC_013740.1 KEGG: lga:LGAS_1558 hypothetical protein; hypothetical protein 923145 8737275 Acfer_0795 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398498.1 921574 D 591001 CDS YP_003398499.1 284048160 8737276 923142..924461 1 NC_013740.1 KEGG: lac:LBA0469 hypothetical protein; hypothetical protein 924461 8737276 Acfer_0796 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398499.1 923142 D 591001 CDS YP_003398500.1 284048161 8737277 924474..926747 1 NC_013740.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: lga:LGAS_1556 Lhr-like helicase; DEAD/DEAH box helicase 926747 8737277 Acfer_0797 Acidaminococcus fermentans DSM 20731 DEAD/DEAH box helicase YP_003398500.1 924474 D 591001 CDS YP_003398501.1 284048162 8737278 926770..928146 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bad:BAD_0632 MATE efflux family protein; MATE efflux family protein 928146 8737278 Acfer_0798 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003398501.1 926770 D 591001 CDS YP_003398502.1 284048163 8737279 complement(928198..929106) 1 NC_013740.1 KEGG: pca:Pcar_0936 GGDEF domain-containing protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase 929106 8737279 Acfer_0799 Acidaminococcus fermentans DSM 20731 PAS/PAC sensor-containing diguanylate cyclase YP_003398502.1 928198 R 591001 CDS YP_003398503.1 284048164 8737280 929254..930180 1 NC_013740.1 PFAM: Domain of unknown function DUF1848; KEGG: mla:Mlab_0293 hypothetical protein; hypothetical protein 930180 8737280 Acfer_0800 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398503.1 929254 D 591001 CDS YP_003398504.1 284048165 8737281 complement(930233..930655) 1 NC_013740.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ele:Elen_1945 GCN5-related N- acetyltransferase; N-acetyltransferase GCN5 930655 8737281 Acfer_0801 Acidaminococcus fermentans DSM 20731 N-acetyltransferase GCN5 YP_003398504.1 930233 R 591001 CDS YP_003398505.1 284048166 8737282 complement(930874..935229) 1 NC_013740.1 KEGG: cdf:CD2965 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; PAS domain containing protein; GGDEF domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 935229 8737282 Acfer_0802 Acidaminococcus fermentans DSM 20731 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_003398505.1 930874 R 591001 CDS YP_003398506.1 284048167 8737283 935587..936174 1 NC_013740.1 TIGRFAM: thiW protein; PFAM: ThiW family protein; KEGG: cbf:CLI_2304 ThiW protein; thiW protein 936174 8737283 Acfer_0803 Acidaminococcus fermentans DSM 20731 thiW protein YP_003398506.1 935587 D 591001 CDS YP_003398507.1 284048168 8737284 936143..936949 1 NC_013740.1 PFAM: hydroxyethylthiazole kinase; KEGG: cbf:CLI_2303 hydroxyethylthiazole kinase; Hydroxyethylthiazole kinase 936949 8737284 Acfer_0804 Acidaminococcus fermentans DSM 20731 Hydroxyethylthiazole kinase YP_003398507.1 936143 D 591001 CDS YP_003398508.1 284048169 8737285 937136..938728 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: ctc:CTC00584 putative efflux pump component MtrF; AbgT transporter 938728 8737285 Acfer_0805 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003398508.1 937136 D 591001 CDS YP_003398509.1 284048170 8737286 938808..939902 1 NC_013740.1 PFAM: amidohydrolase; KEGG: aoe:Clos_2476 amidohydrolase; amidohydrolase 939902 8737286 Acfer_0806 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003398509.1 938808 D 591001 CDS YP_003398510.1 284048171 8737287 complement(939953..940963) 1 NC_013740.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: tde:TDE0868 oxidoreductase, FAD/FMN-binding; NADH:flavin oxidoreductase 940963 8737287 Acfer_0807 Acidaminococcus fermentans DSM 20731 NADH:flavin oxidoreductase YP_003398510.1 939953 R 591001 CDS YP_003398511.1 284048172 8737288 941266..942732 1 NC_013740.1 PFAM: peptidase U34 dipeptidase; KEGG: bad:BAD_0168 dipeptidase; peptidase U34 dipeptidase 942732 8737288 Acfer_0808 Acidaminococcus fermentans DSM 20731 peptidase U34 dipeptidase YP_003398511.1 941266 D 591001 CDS YP_003398512.1 284048173 8737289 942972..943349 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: cpy:Cphy_0116 ArsR family transcriptional regulator; ArsR family transcriptional regulator 943349 8737289 Acfer_0809 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003398512.1 942972 D 591001 CDS YP_003398513.1 284048174 8737290 943466..943723 1 NC_013740.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: cpy:Cphy_1769 phosphotransferase system, phosphocarrier protein HPr; phosphotransferase system, phosphocarrier protein HPr 943723 8737290 Acfer_0810 Acidaminococcus fermentans DSM 20731 phosphotransferase system, phosphocarrier protein HPr YP_003398513.1 943466 D 591001 CDS YP_003398514.1 284048175 8737291 943736..945370 1 NC_013740.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: cpy:Cphy_1770 phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 945370 8737291 Acfer_0811 Acidaminococcus fermentans DSM 20731 phosphoenolpyruvate-protein phosphotransferase YP_003398514.1 943736 D 591001 CDS YP_003398515.1 284048176 8737292 945390..946115 1 NC_013740.1 KEGG: cco:CCC13826_0299 spore coat polysaccharide biosynthesis protein SpsC-like protein; hypothetical protein 946115 8737292 Acfer_0812 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398515.1 945390 D 591001 CDS YP_003398516.1 284048177 8737293 946126..946836 1 NC_013740.1 PFAM: protein of unknown function DUF633; KEGG: sth:STH597 hypothetical protein; hypothetical protein 946836 8737293 Acfer_0813 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398516.1 946126 D 591001 CDS YP_003398517.1 284048178 8737294 946811..947629 1 NC_013740.1 PFAM: protein of unknown function DUF34; KEGG: cpe:CPE2004 hypothetical protein; hypothetical protein 947629 8737294 Acfer_0814 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398517.1 946811 D 591001 CDS YP_003398518.1 284048179 8737295 947642..948565 1 NC_013740.1 KEGG: sat:SYN_02192 HD-superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 948565 8737295 Acfer_0815 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398518.1 947642 D 591001 CDS YP_003398519.1 284048180 8737297 948985..949302 1 NC_013740.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rba:RB12160 thioredoxin 1; thioredoxin 949302 8737297 Acfer_0816 Acidaminococcus fermentans DSM 20731 thioredoxin YP_003398519.1 948985 D 591001 CDS YP_003398520.1 284048181 8737298 949320..950261 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: btl:BALH_4936 glycosyltransferase, group 2 family protein; family 2 glycosyl transferase 950261 8737298 Acfer_0817 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398520.1 949320 D 591001 CDS YP_003398521.1 284048182 8737299 950448..951146 1 NC_013740.1 PFAM: NLP/P60 protein; Peptidoglycan-binding domain 1 protein; KEGG: bha:BH3671 cell wall lytic activity; NLP/P60 protein 951146 8737299 Acfer_0818 Acidaminococcus fermentans DSM 20731 NLP/P60 protein YP_003398521.1 950448 D 591001 CDS YP_003398522.1 284048183 8737300 951476..951859 1 NC_013740.1 PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: cth:Cthe_0620 DtxR family iron dependent repressor; DtxR family iron (metal) dependent repressor 951859 8737300 Acfer_0819 Acidaminococcus fermentans DSM 20731 DtxR family iron (metal) dependent repressor YP_003398522.1 951476 D 591001 CDS YP_003398523.1 284048184 8737301 952021..952719 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cce:Ccel_1658 two component transcriptional regulator, winged helix family; two component transcriptional regulator, winged helix family 952719 8737301 Acfer_0820 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003398523.1 952021 D 591001 CDS YP_003398524.1 284048185 8737302 952716..954365 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: dsy:DSY0822 hypothetical protein; integral membrane sensor signal transduction histidine kinase 954365 8737302 Acfer_0821 Acidaminococcus fermentans DSM 20731 integral membrane sensor signal transduction histidine kinase YP_003398524.1 952716 D 591001 CDS YP_003398525.1 284048186 8737303 954358..955380 1 NC_013740.1 PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; KEGG: sus:Acid_7552 peptidase M15D, VanX D-ala-D- ala dipeptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 955380 8737303 Acfer_0822 Acidaminococcus fermentans DSM 20731 peptidase M15D vanX D-ala-D-ala dipeptidase YP_003398525.1 954358 D 591001 CDS YP_003398526.1 284048187 8737304 955523..955858 1 NC_013740.1 PFAM: protein of unknown function DUF964; KEGG: ate:Athe_0692 protein of unknown function DUF964; hypothetical protein 955858 8737304 Acfer_0823 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398526.1 955523 D 591001 CDS YP_003398527.1 284048188 8737305 955858..956769 1 NC_013740.1 KEGG: ere:EUBREC_0696 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase 956769 8737305 Acfer_0824 Acidaminococcus fermentans DSM 20731 UDP-N-acetylenolpyruvoylglucosamine reductase YP_003398527.1 955858 D 591001 CDS YP_003398528.1 284048189 8737306 956845..957774 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cac:CAC1045 permease; hypothetical protein 957774 8737306 Acfer_0825 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398528.1 956845 D 591001 CDS YP_003398529.1 284048190 8737307 957789..958154 1 NC_013740.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dhd:Dhaf_4885 glyoxalase/bleomycin resistance protein/dioxygenase; Glyoxalase/bleomycin resistance protein/dioxygenase 958154 8737307 Acfer_0826 Acidaminococcus fermentans DSM 20731 Glyoxalase/bleomycin resistance protein/dioxygenase YP_003398529.1 957789 D 591001 CDS YP_003398530.1 284048191 8737308 958167..958607 1 NC_013740.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: ppd:Ppro_1689 large conductance mechanosensitive channel protein; large conductance mechanosensitive channel protein 958607 8737308 Acfer_0827 Acidaminococcus fermentans DSM 20731 large conductance mechanosensitive channel protein YP_003398530.1 958167 D 591001 CDS YP_003398531.1 284048192 8737309 958682..959908 1 NC_013740.1 KEGG: fnu:FN0054 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tyrosyl-tRNA synthetase 959908 8737309 Acfer_0828 Acidaminococcus fermentans DSM 20731 tyrosyl-tRNA synthetase YP_003398531.1 958682 D 591001 CDS YP_003398532.1 284048193 8737310 complement(959998..961455) 1 NC_013740.1 PFAM: AMP-dependent synthetase and ligase; KEGG: hmo:HM1_0197 long-chain-fatty-acid-CoA ligase; AMP-dependent synthetase and ligase 961455 8737310 Acfer_0829 Acidaminococcus fermentans DSM 20731 AMP-dependent synthetase and ligase YP_003398532.1 959998 R 591001 CDS YP_003398533.1 284048194 8737311 961775..963364 1 NC_013740.1 KEGG: fma:FMG_1388 hypothetical protein; hypothetical protein 963364 8737311 Acfer_0830 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398533.1 961775 D 591001 CDS YP_003398534.1 284048195 8737312 963358..964770 1 NC_013740.1 KEGG: shi:Shel_19270 histidine kinase; Signal transduction histidine kinase-like protein 964770 8737312 Acfer_0831 Acidaminococcus fermentans DSM 20731 Signal transduction histidine kinase-like protein YP_003398534.1 963358 D 591001 CDS YP_003398535.1 284048196 8737313 964745..965362 1 NC_013740.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: shi:Shel_19260 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; two component transcriptional regulator, LuxR family 965362 8737313 Acfer_0832 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, LuxR family YP_003398535.1 964745 D 591001 CDS YP_003398536.1 284048197 8737314 965739..966839 1 NC_013740.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: oan:Oant_2761 inosine/uridine-preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 966839 8737314 Acfer_0833 Acidaminococcus fermentans DSM 20731 inosine/uridine-preferring nucleoside hydrolase YP_003398536.1 965739 D 591001 CDS YP_003398537.1 284048198 8737315 966858..968456 1 NC_013740.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: swo:Swol_1594 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterases-like protein; 5'-nucleotidase 968456 8737315 Acfer_0834 Acidaminococcus fermentans DSM 20731 5'-nucleotidase YP_003398537.1 966858 D 591001 CDS YP_003398538.1 284048199 8737316 968683..969711 1 NC_013740.1 hypothetical protein 969711 8737316 Acfer_0835 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398538.1 968683 D 591001 CDS YP_003398539.1 284048200 8737317 969901..971343 1 NC_013740.1 KEGG: lsp:Bsph_3109 hypothetical protein; hypothetical protein 971343 8737317 Acfer_0836 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398539.1 969901 D 591001 CDS YP_003398540.1 284048201 8737318 971362..972471 1 NC_013740.1 KEGG: bha:BH1806 hypothetical protein; hypothetical protein 972471 8737318 Acfer_0837 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398540.1 971362 D 591001 CDS YP_003398541.1 284048202 8737319 972482..973243 1 NC_013740.1 PFAM: protein of unknown function DUF477; KEGG: bha:BH1807 hypothetical protein; hypothetical protein 973243 8737319 Acfer_0838 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398541.1 972482 D 591001 CDS YP_003398542.1 284048203 8737320 973256..974266 1 NC_013740.1 hypothetical protein 974266 8737320 Acfer_0839 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398542.1 973256 D 591001 CDS YP_003398543.1 284048204 8737321 974266..975066 1 NC_013740.1 KEGG: cce:Ccel_2393 S-layer domain protein; hypothetical protein 975066 8737321 Acfer_0840 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398543.1 974266 D 591001 CDS YP_003398544.1 284048205 8737322 975094..975609 1 NC_013740.1 hypothetical protein 975609 8737322 Acfer_0841 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398544.1 975094 D 591001 CDS YP_003398545.1 284048206 8737323 complement(975606..976739) 1 NC_013740.1 hypothetical protein 976739 8737323 Acfer_0842 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398545.1 975606 R 591001 CDS YP_003398546.1 284048207 8737324 976996..977589 1 NC_013740.1 PFAM: protein of unknown function DUF322; KEGG: tpd:Teth39_1096 hypothetical protein; hypothetical protein 977589 8737324 Acfer_0843 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398546.1 976996 D 591001 CDS YP_003398547.1 284048208 8737325 977586..978107 1 NC_013740.1 KEGG: sth:STH1851 hypothetical protein; hypothetical protein 978107 8737325 Acfer_0844 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398547.1 977586 D 591001 CDS YP_003398548.1 284048209 8737326 978122..978346 1 NC_013740.1 PFAM: Protein of unknown function DUF2273; KEGG: cce:Ccel_1906 hypothetical protein; hypothetical protein 978346 8737326 Acfer_0845 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398548.1 978122 D 591001 CDS YP_003398549.1 284048210 8737327 978365..978784 1 NC_013740.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cth:Cthe_0834 NusB antitermination factor; NusB antitermination factor 978784 8737327 Acfer_0846 Acidaminococcus fermentans DSM 20731 NusB antitermination factor YP_003398549.1 978365 D 591001 CDS YP_003398550.1 284048211 8737328 978774..979733 1 NC_013740.1 PFAM: peptidase M22 glycoprotease; KEGG: bbe:BBR47_23360 peptidase M22 family protein; peptidase M22 glycoprotease 979733 8737328 Acfer_0847 Acidaminococcus fermentans DSM 20731 peptidase M22 glycoprotease YP_003398550.1 978774 D 591001 CDS YP_003398551.1 284048212 8737329 979730..980944 1 NC_013740.1 KEGG: sth:STH1846 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit 980944 8737329 Acfer_0848 Acidaminococcus fermentans DSM 20731 exodeoxyribonuclease VII large subunit YP_003398551.1 979730 D 591001 CDS YP_003398552.1 284048213 8737330 980944..981189 1 NC_013740.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: dsa:Desal_0738 exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit 981189 8737330 Acfer_0849 Acidaminococcus fermentans DSM 20731 exodeoxyribonuclease VII small subunit YP_003398552.1 980944 D 591001 CDS YP_003398553.1 284048214 8737331 981189..982064 1 NC_013740.1 PFAM: Polyprenyl synthetase; KEGG: dae:Dtox_2586 polyprenyl synthetase; polyprenyl synthetase 982064 8737331 Acfer_0850 Acidaminococcus fermentans DSM 20731 polyprenyl synthetase YP_003398553.1 981189 D 591001 CDS YP_003398554.1 284048215 8737332 982088..983971 1 NC_013740.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: drm:Dred_1078 deoxyxylulose-5-phosphate synthase; deoxyxylulose-5-phosphate synthase 983971 8737332 Acfer_0851 Acidaminococcus fermentans DSM 20731 deoxyxylulose-5-phosphate synthase YP_003398554.1 982088 D 591001 CDS YP_003398555.1 284048216 8737333 983968..984771 1 NC_013740.1 KEGG: drm:Dred_1079 hemolysin A; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein; hemolysin A 984771 8737333 Acfer_0852 Acidaminococcus fermentans DSM 20731 hemolysin A YP_003398555.1 983968 D 591001 CDS YP_003398556.1 284048217 8737334 984800..985678 1 NC_013740.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mta:Moth_1509 NAD(+) kinase; ATP-NAD/AcoX kinase 985678 8737334 Acfer_0853 Acidaminococcus fermentans DSM 20731 ATP-NAD/AcoX kinase YP_003398556.1 984800 D 591001 CDS YP_003398557.1 284048218 8737335 985693..986148 1 NC_013740.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: dhd:Dhaf_3484 arginine repressor, ArgR; arginine repressor ArgR 986148 8737335 Acfer_0854 Acidaminococcus fermentans DSM 20731 arginine repressor ArgR YP_003398557.1 985693 D 591001 CDS YP_003398558.1 284048219 8737336 986151..987875 1 NC_013740.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: cce:Ccel_1896 DNA repair protein RecN; DNA repair protein RecN 987875 8737336 Acfer_0855 Acidaminococcus fermentans DSM 20731 DNA repair protein RecN YP_003398558.1 986151 D 591001 CDS YP_003398559.1 284048220 8737337 987856..988413 1 NC_013740.1 PFAM: NUDIX hydrolase; KEGG: bbe:BBR47_23760 ADP-ribose pyrophosphatase; NUDIX hydrolase 988413 8737337 Acfer_0856 Acidaminococcus fermentans DSM 20731 NUDIX hydrolase YP_003398559.1 987856 D 591001 CDS YP_003398560.1 284048221 8737338 988589..988849 1 NC_013740.1 PFAM: Stage V sporulation protein S; KEGG: dae:Dtox_3098 stage V sporulation protein S; Stage V sporulation protein S 988849 8737338 Acfer_0857 Acidaminococcus fermentans DSM 20731 Stage V sporulation protein S YP_003398560.1 988589 D 591001 CDS YP_003398561.1 284048222 8737339 complement(988897..989868) 1 NC_013740.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; KEGG: cco:CCC13826_1743 nitrogenase cofactor biosynthesis protein NifB; aliphatic sulfonate ABC transporter substrate-binding protein 989868 8737339 Acfer_0858 Acidaminococcus fermentans DSM 20731 aliphatic sulfonate ABC transporter substrate-binding protein YP_003398561.1 988897 R 591001 CDS YP_003398562.1 284048223 8737340 complement(990000..990716) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cai:Caci_7381 ABC transporter related; ABC transporter 990716 8737340 Acfer_0859 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398562.1 990000 R 591001 CDS YP_003398563.1 284048224 8737341 complement(990704..991447) 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cco:CCC13826_1746 putative molybdenum ABC transporter, solute-binding protein; binding-protein-dependent transport system inner membrane protein 991447 8737341 Acfer_0860 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003398563.1 990704 R 591001 CDS YP_003398564.1 284048225 8737342 complement(991437..991712) 1 NC_013740.1 KEGG: ere:EUBREC_0233 hypothetical protein; hypothetical protein 991712 8737342 Acfer_0861 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398564.1 991437 R 591001 CDS YP_003398565.1 284048226 8737343 complement(991832..993385) 1 NC_013740.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: fnu:FN2105 integral membrane protein; hypothetical protein 993385 8737343 Acfer_0862 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398565.1 991832 R 591001 CDS YP_003398566.1 284048227 8737344 complement(993405..993863) 1 NC_013740.1 KEGG: fnu:FN2104 hypothetical protein; hypothetical protein 993863 8737344 Acfer_0863 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398566.1 993405 R 591001 CDS YP_003398567.1 284048228 8737345 complement(993929..994924) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: fnu:FN2103 RecA protein; hypothetical protein 994924 8737345 Acfer_0864 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398567.1 993929 R 591001 CDS YP_003398568.1 284048229 8737346 995200..996279 1 NC_013740.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: apv:Apar_0061 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 996279 8737346 Acfer_0865 Acidaminococcus fermentans DSM 20731 iron-containing alcohol dehydrogenase YP_003398568.1 995200 D 591001 CDS YP_003398569.1 284048230 8737347 996376..997728 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: bhy:BHWA1_00467 NorM, Na+-driven multidrug efflux pump; MATE efflux family protein 997728 8737347 Acfer_0866 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003398569.1 996376 D 591001 CDS YP_003398570.1 284048231 8737348 997880..998530 1 NC_013740.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ccu:Ccur_09790 cupin domain-containing protein; cupin 998530 8737348 Acfer_0867 Acidaminococcus fermentans DSM 20731 cupin YP_003398570.1 997880 D 591001 CDS YP_003398571.1 284048232 8737349 complement(998664..1001525) 1 NC_013740.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: eel:EUBELI_20133 phosphoglucosamine mutase; diguanylate phosphodiesterase 1001525 8737349 Acfer_0868 Acidaminococcus fermentans DSM 20731 diguanylate phosphodiesterase YP_003398571.1 998664 R 591001 CDS YP_003398572.1 284048233 8737350 complement(1001677..1002867) 1 NC_013740.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: cbl:CLK_0569 metallo-beta- lactamase/flavodoxin domain-containing protein; flavodoxin/nitric oxide synthase 1002867 8737350 Acfer_0869 Acidaminococcus fermentans DSM 20731 flavodoxin/nitric oxide synthase YP_003398572.1 1001677 R 591001 CDS YP_003398573.1 284048234 8737351 1003860..1004330 1 NC_013740.1 KEGG: npu:Npun_F5977 hypothetical protein; hypothetical protein 1004330 8737351 Acfer_0870 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398573.1 1003860 D 591001 CDS YP_003398574.1 284048235 8737353 1004848..1005609 1 NC_013740.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; DNA polymerase beta domain protein region; KEGG: gka:GK2711 hypothetical protein; nucleotidyltransferase substrate binding protein 1005609 8737353 Acfer_0872 Acidaminococcus fermentans DSM 20731 nucleotidyltransferase substrate binding protein YP_003398574.1 1004848 D 591001 CDS YP_003398575.1 284048236 8737354 1005905..1006141 1 NC_013740.1 PFAM: FeoA family protein; KEGG: cpy:Cphy_3525 FeoA family protein; FeoA family protein 1006141 8737354 Acfer_0873 Acidaminococcus fermentans DSM 20731 FeoA family protein YP_003398575.1 1005905 D 591001 CDS YP_003398576.1 284048237 8737355 1006134..1008215 1 NC_013740.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: cpy:Cphy_3524 ferrous iron transport protein B; ferrous iron transport protein B 1008215 8737355 Acfer_0874 Acidaminococcus fermentans DSM 20731 ferrous iron transport protein B YP_003398576.1 1006134 D 591001 CDS YP_003398577.1 284048238 8737356 1008363..1008581 1 NC_013740.1 PFAM: Heavy metal transport/detoxification protein; KEGG: eel:EUBELI_01434 hypothetical protein; heavy metal transport/detoxification protein 1008581 8737356 Acfer_0875 Acidaminococcus fermentans DSM 20731 heavy metal transport/detoxification protein YP_003398577.1 1008363 D 591001 CDS YP_003398578.1 284048239 8737357 1008617..1010527 1 NC_013740.1 TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ere:EUBREC_2968 cation-transporting ATPase, P- type; heavy metal translocating P-type ATPase 1010527 8737357 Acfer_0876 Acidaminococcus fermentans DSM 20731 heavy metal translocating P-type ATPase YP_003398578.1 1008617 D 591001 CDS YP_003398579.1 284048240 8737358 complement(1010564..1011109) 1 NC_013740.1 PFAM: NADPH-dependent FMN reductase; KEGG: bhy:BHWA1_00383 hypothetical protein; NADPH-dependent FMN reductase 1011109 8737358 Acfer_0877 Acidaminococcus fermentans DSM 20731 NADPH-dependent FMN reductase YP_003398579.1 1010564 R 591001 CDS YP_003398580.1 284048241 8737359 1011250..1011978 1 NC_013740.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: lpp:lpp0335 hypothetical protein; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1011978 8737359 Acfer_0878 Acidaminococcus fermentans DSM 20731 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD YP_003398580.1 1011250 D 591001 CDS YP_003398581.1 284048242 8737360 1011975..1012856 1 NC_013740.1 KEGG: aoe:Clos_0923 beta-lactamase; Beta-lactamase class A-like protein 1012856 8737360 Acfer_0879 Acidaminococcus fermentans DSM 20731 Beta-lactamase class A-like protein YP_003398581.1 1011975 D 591001 CDS YP_003398582.1 284048243 8737361 complement(1012889..1013560) 1 NC_013740.1 KEGG: shi:Shel_25490 protein of unknown function (DUF1858); hypothetical protein 1013560 8737361 Acfer_0880 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398582.1 1012889 R 591001 CDS YP_003398583.1 284048244 8737363 1014354..1016114 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: eel:EUBELI_20433 ATP-binding cassette, subfamily C, bacterial; ABC transporter 1016114 8737363 Acfer_0882 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398583.1 1014354 D 591001 CDS YP_003398584.1 284048245 8737364 1016104..1017744 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cpy:Cphy_2135 ABC transporter related; ABC transporter 1017744 8737364 Acfer_0883 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398584.1 1016104 D 591001 CDS YP_003398585.1 284048246 8737365 complement(1017827..1018843) 1 NC_013740.1 KEGG: mhu:Mhun_1564 hypothetical protein; hypothetical protein 1018843 8737365 Acfer_0884 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398585.1 1017827 R 591001 CDS YP_003398586.1 284048247 8737366 1019167..1020189 1 NC_013740.1 KEGG: drm:Dred_1619 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 1020189 8737366 Acfer_0885 Acidaminococcus fermentans DSM 20731 phenylalanyl-tRNA synthetase subunit alpha YP_003398586.1 1019167 D 591001 CDS YP_003398587.1 284048248 8737367 1020207..1022645 1 NC_013740.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: dae:Dtox_2395 phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 1022645 8737367 Acfer_0886 Acidaminococcus fermentans DSM 20731 phenylalanyl-tRNA synthetase subunit beta YP_003398587.1 1020207 D 591001 CDS YP_003398588.1 284048249 8737371 1023124..1023423 1 NC_013740.1 PFAM: HIRAN; KEGG: ere:EUBREC_3436 hypothetical protein; HIRAN protein 1023423 8737371 Acfer_0887 Acidaminococcus fermentans DSM 20731 HIRAN protein YP_003398588.1 1023124 D 591001 CDS YP_003398589.1 284048250 8737372 1023731..1024786 1 NC_013740.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: apv:Apar_1228 alcohol dehydrogenase zinc- binding domain protein; alcohol dehydrogenase 1024786 8737372 Acfer_0888 Acidaminococcus fermentans DSM 20731 alcohol dehydrogenase YP_003398589.1 1023731 D 591001 CDS YP_003398590.1 284048251 8737373 1024854..1025819 1 NC_013740.1 PFAM: cobalamin synthesis protein P47K; KEGG: apv:Apar_1227 cobalamin synthesis protein P47K; cobalamin synthesis protein P47K 1025819 8737373 Acfer_0889 Acidaminococcus fermentans DSM 20731 cobalamin synthesis protein P47K YP_003398590.1 1024854 D 591001 CDS YP_003398591.1 284048252 8737375 1026543..1026824 1 NC_013740.1 PFAM: protein of unknown function DUF1294; KEGG: bfs:BF2919 hypothetical protein; hypothetical protein 1026824 8737375 Acfer_0891 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398591.1 1026543 D 591001 CDS YP_003398592.1 284048253 8737376 1027007..1027441 1 NC_013740.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: gtn:GTNG_0075 transcriptional regulator; transcriptional repressor CtsR 1027441 8737376 Acfer_0892 Acidaminococcus fermentans DSM 20731 transcriptional repressor CtsR YP_003398592.1 1027007 D 591001 CDS YP_003398593.1 284048254 8737377 1027442..1028815 1 NC_013740.1 TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: oih:OB0094 DNA repair protein RadA; DNA repair protein RadA 1028815 8737377 Acfer_0893 Acidaminococcus fermentans DSM 20731 DNA repair protein RadA YP_003398593.1 1027442 D 591001 CDS YP_003398594.1 284048255 8737378 1028963..1031590 1 NC_013740.1 KEGG: cce:Ccel_2096 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 1031590 8737378 Acfer_0894 Acidaminococcus fermentans DSM 20731 alanyl-tRNA synthetase YP_003398594.1 1028963 D 591001 CDS YP_003398595.1 284048256 8737379 1031628..1032158 1 NC_013740.1 KEGG: ere:EUBREC_1092 hypothetical protein; hypothetical protein 1032158 8737379 Acfer_0895 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398595.1 1031628 D 591001 CDS YP_003398596.1 284048257 8737380 1032471..1032734 1 NC_013740.1 PFAM: protein of unknown function DUF965; KEGG: hmo:HM1_0531 hypothetical protein; hypothetical protein 1032734 8737380 Acfer_0896 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398596.1 1032471 D 591001 CDS YP_003398597.1 284048258 8737381 1032731..1033150 1 NC_013740.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: gwc:GWCH70_2488 Holliday junction resolvase YqgF; Holliday junction resolvase YqgF 1033150 8737381 Acfer_0897 Acidaminococcus fermentans DSM 20731 Holliday junction resolvase YqgF YP_003398597.1 1032731 D 591001 CDS YP_003398598.1 284048259 8737382 1033153..1033467 1 NC_013740.1 PFAM: protein of unknown function DUF1292; KEGG: hmo:HM1_0534 hypothetical protein; hypothetical protein 1033467 8737382 Acfer_0898 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398598.1 1033153 D 591001 CDS YP_003398599.1 284048260 8737383 1033483..1034511 1 NC_013740.1 PFAM: aminodeoxychorismate lyase; KEGG: hmo:HM1_0536 conserved hypothetical protein tigr00247; aminodeoxychorismate lyase 1034511 8737383 Acfer_0899 Acidaminococcus fermentans DSM 20731 aminodeoxychorismate lyase YP_003398599.1 1033483 D 591001 CDS YP_003398600.1 284048261 8737384 1034508..1035728 1 NC_013740.1 PFAM: peptidase U32; KEGG: cce:Ccel_1474 peptidase U32; peptidase U32 1035728 8737384 Acfer_0900 Acidaminococcus fermentans DSM 20731 peptidase U32 YP_003398600.1 1034508 D 591001 CDS YP_003398601.1 284048262 8737385 1035841..1036890 1 NC_013740.1 PFAM: peptidase M24; creatinase; KEGG: oih:OB1896 Xaa-Pro dipeptidase; peptidase M24 1036890 8737385 Acfer_0901 Acidaminococcus fermentans DSM 20731 peptidase M24 YP_003398601.1 1035841 D 591001 CDS YP_003398602.1 284048263 8737386 1036928..1037485 1 NC_013740.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW domain protein; Elongation factor P/YeiP protein; KEGG: dau:Daud_1005 translation elongation factor P; translation elongation factor P 1037485 8737386 Acfer_0902 Acidaminococcus fermentans DSM 20731 translation elongation factor P YP_003398602.1 1036928 D 591001 CDS YP_003398603.1 284048264 8737387 1037578..1038186 1 NC_013740.1 PFAM: Phosphoglycerate mutase; KEGG: mta:Moth_1105 phosphoglycerate mutase; phosphoglycerate mutase 1038186 8737387 Acfer_0903 Acidaminococcus fermentans DSM 20731 phosphoglycerate mutase YP_003398603.1 1037578 D 591001 CDS YP_003398604.1 284048265 8737388 1038246..1039139 1 NC_013740.1 PFAM: Uncharacterised conserved protein UCP018688; KEGG: hhe:HH1509 hypothetical protein; hypothetical protein 1039139 8737388 Acfer_0904 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398604.1 1038246 D 591001 CDS YP_003398605.1 284048266 8737389 1039152..1040333 1 NC_013740.1 KEGG: cdf:CD2476 hypothetical protein; intracellular survival-like acetyltransferase i 1040333 8737389 Acfer_0905 Acidaminococcus fermentans DSM 20731 intracellular survival-like acetyltransferase i YP_003398605.1 1039152 D 591001 CDS YP_003398606.1 284048267 8737390 1040345..1044121 1 NC_013740.1 KEGG: cth:Cthe_0554 phosphoribosylformylglycinamidine synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase 1044121 8737390 Acfer_0906 Acidaminococcus fermentans DSM 20731 phosphoribosylformylglycinamidine synthase YP_003398606.1 1040345 D 591001 CDS YP_003398607.1 284048268 8737391 1044292..1047219 1 NC_013740.1 PFAM: Peptidase M16C associated domain protein; peptidase M16 domain protein; KEGG: cno:NT01CX_1662 zinc-dependent peptidase; Peptidase M16C associated domain-containing protein 1047219 8737391 Acfer_0907 Acidaminococcus fermentans DSM 20731 Peptidase M16C associated domain-containing protein YP_003398607.1 1044292 D 591001 CDS YP_003398608.1 284048269 8737392 1047454..1048494 1 NC_013740.1 KEGG: eel:EUBELI_01114 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1048494 8737392 Acfer_0908 Acidaminococcus fermentans DSM 20731 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003398608.1 1047454 D 591001 CDS YP_003398609.1 284048270 8737393 1048513..1048926 1 NC_013740.1 PFAM: amino acid-binding ACT domain protein; KEGG: mst:Msp_1008 regulatory protein; amino acid-binding ACT protein 1048926 8737393 Acfer_0909 Acidaminococcus fermentans DSM 20731 amino acid-binding ACT protein YP_003398609.1 1048513 D 591001 CDS YP_003398610.1 284048271 8737394 1049307..1049813 1 NC_013740.1 hypothetical protein 1049813 8737394 Acfer_0910 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398610.1 1049307 D 591001 CDS YP_003398611.1 284048272 8737395 1049832..1050263 1 NC_013740.1 KEGG: shi:Shel_05990 hypothetical protein; hypothetical protein 1050263 8737395 Acfer_0911 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398611.1 1049832 D 591001 CDS YP_003398612.1 284048273 8737396 1050487..1051350 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3865 LysR family transcriptional regulator; LysR family transcriptional regulator 1051350 8737396 Acfer_0912 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398612.1 1050487 D 591001 CDS YP_003398613.1 284048274 8737397 1051464..1053410 1 NC_013740.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ckr:CKR_0522 hypothetical protein; NADH:flavin oxidoreductase 1053410 8737397 Acfer_0913 Acidaminococcus fermentans DSM 20731 NADH:flavin oxidoreductase YP_003398613.1 1051464 D 591001 CDS YP_003398614.1 284048275 8737398 1053714..1054016 1 NC_013740.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: cpr:CPR_2329 TrpR-like protein YerC/YecD; TrpR-like protein YerC/YecD 1054016 8737398 Acfer_0914 Acidaminococcus fermentans DSM 20731 TrpR-like protein YerC/YecD YP_003398614.1 1053714 D 591001 CDS YP_003398615.1 284048276 8737399 1054013..1055188 1 NC_013740.1 KEGG: hmo:HM1_3053 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); histidyl-tRNA synthetase 2 1055188 8737399 Acfer_0915 Acidaminococcus fermentans DSM 20731 histidyl-tRNA synthetase 2 YP_003398615.1 1054013 D 591001 CDS YP_003398616.1 284048277 8737400 1055202..1055852 1 NC_013740.1 KEGG: drm:Dred_2356 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; ATP phosphoribosyltransferase 1055852 8737400 Acfer_0916 Acidaminococcus fermentans DSM 20731 ATP phosphoribosyltransferase YP_003398616.1 1055202 D 591001 CDS YP_003398617.1 284048278 8737401 1055849..1057195 1 NC_013740.1 KEGG: hmo:HM1_3051 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase 1057195 8737401 Acfer_0917 Acidaminococcus fermentans DSM 20731 histidinol dehydrogenase YP_003398617.1 1055849 D 591001 CDS YP_003398618.1 284048279 8737402 1057195..1058346 1 NC_013740.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: drm:Dred_2354 histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1058346 8737402 Acfer_0918 Acidaminococcus fermentans DSM 20731 histidinol-phosphate aminotransferase YP_003398618.1 1057195 D 591001 CDS YP_003398619.1 284048280 8737403 1058366..1058953 1 NC_013740.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: sth:STH2836 imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 1058953 8737403 Acfer_0919 Acidaminococcus fermentans DSM 20731 imidazoleglycerol-phosphate dehydratase YP_003398619.1 1058366 D 591001 CDS YP_003398620.1 284048281 8737404 1058955..1059569 1 NC_013740.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: dau:Daud_1624 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 1059569 8737404 Acfer_0920 Acidaminococcus fermentans DSM 20731 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_003398620.1 1058955 D 591001 CDS YP_003398621.1 284048282 8737405 1059566..1060294 1 NC_013740.1 KEGG: drm:Dred_2351 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 1060294 8737405 Acfer_0921 Acidaminococcus fermentans DSM 20731 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_003398621.1 1059566 D 591001 CDS YP_003398622.1 284048283 8737406 1060299..1061057 1 NC_013740.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: pth:PTH_2532 imidazole glycerol phosphate synthase subunit HisF; Imidazole glycerol phosphate synthase cyclase subunit 1061057 8737406 Acfer_0922 Acidaminococcus fermentans DSM 20731 Imidazole glycerol phosphate synthase cyclase subunit YP_003398622.1 1060299 D 591001 CDS YP_003398623.1 284048284 8737407 1061054..1061704 1 NC_013740.1 PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: chy:CHY_1091 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; phosphoribosyl-AMP cyclohydrolase 1061704 8737407 Acfer_0923 Acidaminococcus fermentans DSM 20731 phosphoribosyl-AMP cyclohydrolase YP_003398623.1 1061054 D 591001 CDS YP_003398624.1 284048285 8737408 1061738..1063081 1 NC_013740.1 KEGG: sth:STH194 phosphoglucomutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 1063081 8737408 Acfer_0924 Acidaminococcus fermentans DSM 20731 phosphoglucosamine mutase YP_003398624.1 1061738 D 591001 CDS YP_003398625.1 284048286 8737409 1063424..1065253 1 NC_013740.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: drm:Dred_0295 glucosamine--fructose-6- phosphate aminotransferase; glucosamine/fructose-6-phosphate aminotransferase 1065253 8737409 Acfer_0925 Acidaminococcus fermentans DSM 20731 glucosamine/fructose-6-phosphate aminotransferase YP_003398625.1 1063424 D 591001 CDS YP_003398626.1 284048287 8737410 1065484..1066389 1 NC_013740.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: drm:Dred_0163 quinolinate synthetase; quinolinate synthetase complex subunit A 1066389 8737410 Acfer_0926 Acidaminococcus fermentans DSM 20731 quinolinate synthetase complex subunit A YP_003398626.1 1065484 D 591001 CDS YP_003398627.1 284048288 8737411 1066542..1068161 1 NC_013740.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: pth:PTH_0223 aspartate oxidase; L-aspartate oxidase 1068161 8737411 Acfer_0927 Acidaminococcus fermentans DSM 20731 L-aspartate oxidase YP_003398627.1 1066542 D 591001 CDS YP_003398628.1 284048289 8737412 1068139..1068978 1 NC_013740.1 KEGG: hmo:HM1_0664 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 1068978 8737412 Acfer_0928 Acidaminococcus fermentans DSM 20731 nicotinate-nucleotide pyrophosphorylase YP_003398628.1 1068139 D 591001 CDS YP_003398629.1 284048290 8737413 1069118..1070179 1 NC_013740.1 PFAM: putative sugar-binding domain protein; KEGG: tte:TTE1763 transcriptional regulator; Cro/CI family transcriptional regulator 1070179 8737413 Acfer_0929 Acidaminococcus fermentans DSM 20731 Cro/CI family transcriptional regulator YP_003398629.1 1069118 D 591001 CDS YP_003398630.1 284048291 8737414 1070201..1071205 1 NC_013740.1 KEGG: dae:Dtox_3937 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 1071205 8737414 Acfer_0930 Acidaminococcus fermentans DSM 20731 glyceraldehyde-3-phosphate dehydrogenase, type I YP_003398630.1 1070201 D 591001 CDS YP_003398631.1 284048292 8737415 1071228..1073153 1 NC_013740.1 TIGRFAM: triosephosphate isomerase; PFAM: phosphoglycerate kinase; triosephosphate isomerase; KEGG: ate:Athe_1405 triosephosphate isomerase; triosephosphate isomerase 1073153 8737415 Acfer_0931 Acidaminococcus fermentans DSM 20731 triosephosphate isomerase YP_003398631.1 1071228 D 591001 CDS YP_003398632.1 284048293 8737416 1073161..1074690 1 NC_013740.1 TIGRFAM: phosphoglycerate mutase, 2,3- bisphosphoglycerate-independent; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; KEGG: cpr:CPR_1298 phosphoglyceromutase; phosphoglycerate mutase 1074690 8737416 Acfer_0932 Acidaminococcus fermentans DSM 20731 phosphoglycerate mutase YP_003398632.1 1073161 D 591001 CDS YP_003398633.1 284048294 8737417 1074818..1076101 1 NC_013740.1 KEGG: tte:TTE1759 phosphopyruvate hydratase; TIGRFAM: enolase; PFAM: Enolase-like; enolase 1076101 8737417 Acfer_0933 Acidaminococcus fermentans DSM 20731 enolase YP_003398633.1 1074818 D 591001 CDS YP_003398634.1 284048295 8737418 1076188..1076967 1 NC_013740.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eel:EUBELI_01807 beta-phosphoglucomutase; metal dependent phosphohydrolase 1076967 8737418 Acfer_0934 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003398634.1 1076188 D 591001 CDS YP_003398635.1 284048296 8737419 1077031..1077654 1 NC_013740.1 PFAM: RelA/SpoT domain protein; KEGG: lga:LGAS_0709 ppGpp synthetase/hydrolase catalytic subunit; RelA/SpoT domain-containing protein 1077654 8737419 Acfer_0935 Acidaminococcus fermentans DSM 20731 RelA/SpoT domain-containing protein YP_003398635.1 1077031 D 591001 CDS YP_003398636.1 284048297 8737420 1077687..1078367 1 NC_013740.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: lac:LBA1431 two-component response regulator; two component transcriptional regulator, winged helix family 1078367 8737420 Acfer_0936 Acidaminococcus fermentans DSM 20731 two component transcriptional regulator, winged helix family YP_003398636.1 1077687 D 591001 CDS YP_003398637.1 284048298 8737421 1078380..1079639 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; ATP- binding region ATPase domain protein; KEGG: spk:MGAS9429_Spy0736 two-component system histidine kinase; integral membrane sensor signal transduction histidine kinase 1079639 8737421 Acfer_0937 Acidaminococcus fermentans DSM 20731 integral membrane sensor signal transduction histidine kinase YP_003398637.1 1078380 D 591001 CDS YP_003398638.1 284048299 8737422 1079661..1080698 1 NC_013740.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dze:Dd1591_2702 oxidoreductase domain protein; oxidoreductase domain-containing protein 1080698 8737422 Acfer_0938 Acidaminococcus fermentans DSM 20731 oxidoreductase domain-containing protein YP_003398638.1 1079661 D 591001 CDS YP_003398639.1 284048300 8737423 complement(1080945..1081226) 1 NC_013740.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: apv:Apar_0511 addiction module antitoxin, RelB/DinJ family; RelB/DinJ family addiction module antitoxin 1081226 8737423 Acfer_0939 Acidaminococcus fermentans DSM 20731 RelB/DinJ family addiction module antitoxin YP_003398639.1 1080945 R 591001 CDS YP_003398640.1 284048301 8737424 1081454..1081714 1 NC_013740.1 PFAM: YjcQ; KEGG: ljo:LJ1435 Lj928 prophage major head protein; protein YjcQ 1081714 8737424 Acfer_0940 Acidaminococcus fermentans DSM 20731 protein YjcQ YP_003398640.1 1081454 D 591001 CDS YP_003398641.1 284048302 8737426 1082535..1083623 1 NC_013740.1 KEGG: bhy:BHWA1_02022 hydrolase of the alpha/beta superfamily; alpha/beta superfamily hydrolase 1083623 8737426 Acfer_0942 Acidaminococcus fermentans DSM 20731 alpha/beta superfamily hydrolase YP_003398641.1 1082535 D 591001 CDS YP_003398642.1 284048303 8737427 1083764..1084120 1 NC_013740.1 KEGG: apj:APJL_0917 hypothetical protein; hypothetical protein 1084120 8737427 Acfer_0943 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398642.1 1083764 D 591001 CDS YP_003398643.1 284048304 8737428 1084161..1085342 1 NC_013740.1 PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_3695 major facilitator superfamily MFS_1; major facilitator superfamily protein 1085342 8737428 Acfer_0944 Acidaminococcus fermentans DSM 20731 major facilitator superfamily protein YP_003398643.1 1084161 D 591001 CDS YP_003398644.1 284048305 8737429 1085504..1086190 1 NC_013740.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asu:Asuc_1533 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1086190 8737429 Acfer_0945 Acidaminococcus fermentans DSM 20731 antibiotic biosynthesis monooxygenase YP_003398644.1 1085504 D 591001 CDS YP_003398645.1 284048306 8737431 1086574..1086777 1 NC_013740.1 hypothetical protein 1086777 8737431 Acfer_0947 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398645.1 1086574 D 591001 CDS YP_003398646.1 284048307 8737434 complement(1087464..1088387) 1 NC_013740.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cdf:CD2842 nitrilase (carbon-nitrogen hydrolase); Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 1088387 8737434 Acfer_0950 Acidaminococcus fermentans DSM 20731 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003398646.1 1087464 R 591001 CDS YP_003398647.1 284048308 8737436 1088734..1089603 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cpy:Cphy_2156 LysR family transcriptional regulator; LysR family transcriptional regulator 1089603 8737436 Acfer_0952 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398647.1 1088734 D 591001 CDS YP_003398648.1 284048309 8737439 1090944..1091564 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: cac:CA_P0127 TetR family transcriptional regulator; transcriptional regulator, TetR family 1091564 8737439 Acfer_0955 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003398648.1 1090944 D 591001 CDS YP_003398649.1 284048310 8737440 1091576..1091755 1 NC_013740.1 hypothetical protein 1091755 8737440 Acfer_0956 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398649.1 1091576 D 591001 CDS YP_003398650.1 284048311 8737441 1091770..1092321 1 NC_013740.1 PFAM: NADPH-dependent FMN reductase; KEGG: gbm:Gbem_0784 NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1092321 8737441 Acfer_0957 Acidaminococcus fermentans DSM 20731 NADPH-dependent FMN reductase YP_003398650.1 1091770 D 591001 CDS YP_003398651.1 284048312 8737442 1092338..1093024 1 NC_013740.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: asu:Asuc_1533 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1093024 8737442 Acfer_0958 Acidaminococcus fermentans DSM 20731 antibiotic biosynthesis monooxygenase YP_003398651.1 1092338 D 591001 CDS YP_003398652.1 284048313 8737443 complement(1093163..1093573) 1 NC_013740.1 PFAM: formylmethionine deformylase; KEGG: ppe:PEPE_1676 peptide deformylase; formylmethionine deformylase 1093573 8737443 Acfer_0959 Acidaminococcus fermentans DSM 20731 formylmethionine deformylase YP_003398652.1 1093163 R 591001 CDS YP_003398653.1 284048314 8737444 complement(1093800..1094408) 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: shi:Shel_22630 transcriptional regulator; transcriptional regulator, TetR family 1094408 8737444 Acfer_0960 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003398653.1 1093800 R 591001 CDS YP_003398654.1 284048315 8737445 1094533..1095228 1 NC_013740.1 PFAM: DSBA oxidoreductase; KEGG: shi:Shel_22650 predicted dithiol-disulfide isomerase involved in polyketide biosynthesis; DSBA oxidoreductase 1095228 8737445 Acfer_0961 Acidaminococcus fermentans DSM 20731 DSBA oxidoreductase YP_003398654.1 1094533 D 591001 CDS YP_003398655.1 284048316 8737446 1095243..1095884 1 NC_013740.1 KEGG: shi:Shel_22660 Zn-dependent hydrolase, glyoxylase; Zn-dependent hydrolase 1095884 8737446 Acfer_0962 Acidaminococcus fermentans DSM 20731 Zn-dependent hydrolase YP_003398655.1 1095243 D 591001 CDS YP_003398656.1 284048317 8737448 1096343..1096888 1 NC_013740.1 KEGG: cdf:CD3636 hypothetical protein; hypothetical protein 1096888 8737448 Acfer_0964 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398656.1 1096343 D 591001 CDS YP_003398657.1 284048318 8737449 1096885..1097685 1 NC_013740.1 KEGG: dal:Dalk_0511 hypothetical protein; hypothetical protein 1097685 8737449 Acfer_0965 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398657.1 1096885 D 591001 CDS YP_003398658.1 284048319 8737450 1097688..1098581 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cdf:CD3639 LysR family transcriptional regulator; LysR family transcriptional regulator 1098581 8737450 Acfer_0966 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398658.1 1097688 D 591001 CDS YP_003398659.1 284048320 8737455 1099793..1100017 1 NC_013740.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: swo:Swol_0277 preprotein translocase subunit SecG; preprotein translocase subunit SecG 1100017 8737455 Acfer_0971 Acidaminococcus fermentans DSM 20731 preprotein translocase subunit SecG YP_003398659.1 1099793 D 591001 CDS YP_003398660.1 284048321 8737456 1100102..1100836 1 NC_013740.1 KEGG: rpt:Rpal_5127 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1100836 8737456 Acfer_0972 Acidaminococcus fermentans DSM 20731 alpha/beta hydrolase fold protein YP_003398660.1 1100102 D 591001 CDS YP_003398661.1 284048322 8737457 1100841..1101242 1 NC_013740.1 PFAM: thioesterase superfamily protein; KEGG: pth:PTH_2715 hypothetical protein; thioesterase superfamily protein 1101242 8737457 Acfer_0973 Acidaminococcus fermentans DSM 20731 thioesterase superfamily protein YP_003398661.1 1100841 D 591001 CDS YP_003398662.1 284048323 8737458 1101239..1103710 1 NC_013740.1 KEGG: bcx:BCA_5240 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; ribonuclease R 1103710 8737458 Acfer_0974 Acidaminococcus fermentans DSM 20731 ribonuclease R YP_003398662.1 1101239 D 591001 CDS YP_003398663.1 284048324 8737459 1103661..1104125 1 NC_013740.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: cbf:CLI_0299 SsrA-binding protein; SsrA-binding protein 1104125 8737459 Acfer_0975 Acidaminococcus fermentans DSM 20731 SsrA-binding protein YP_003398663.1 1103661 D 591001 CDS YP_003398664.1 284048325 8737460 1104274..1105269 1 NC_013740.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: fnu:FN0487 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1105269 8737460 Acfer_0976 Acidaminococcus fermentans DSM 20731 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003398664.1 1104274 D 591001 CDS YP_003398665.1 284048326 8737461 1105366..1106838 1 NC_013740.1 PFAM: protein of unknown function DUF344; KEGG: cyt:cce_2971 putative polyphosphate kinase 2; hypothetical protein 1106838 8737461 Acfer_0977 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398665.1 1105366 D 591001 CDS YP_003398666.1 284048327 8737462 1106942..1107745 1 NC_013740.1 PFAM: protein of unknown function DUF152; KEGG: drm:Dred_0706 hypothetical protein; hypothetical protein 1107745 8737462 Acfer_0978 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398666.1 1106942 D 591001 CDS YP_003398667.1 284048328 8737463 1107764..1108468 1 NC_013740.1 PFAM: alanine racemase domain protein; KEGG: mta:Moth_0858 hypothetical protein; alanine racemase 1108468 8737463 Acfer_0979 Acidaminococcus fermentans DSM 20731 alanine racemase YP_003398667.1 1107764 D 591001 CDS YP_003398668.1 284048329 8737464 1108487..1109080 1 NC_013740.1 PFAM: protein of unknown function DUF552; KEGG: dsy:DSY2887 hypothetical protein; hypothetical protein 1109080 8737464 Acfer_0980 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398668.1 1108487 D 591001 CDS YP_003398669.1 284048330 8737465 1109068..1109889 1 NC_013740.1 KEGG: cyh:Cyan8802_1715 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 1109889 8737465 Acfer_0981 Acidaminococcus fermentans DSM 20731 pyrroline-5-carboxylate reductase YP_003398669.1 1109068 D 591001 CDS YP_003398670.1 284048331 8737466 1109891..1110688 1 NC_013740.1 PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: nth:Nther_1318 RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein 1110688 8737466 Acfer_0982 Acidaminococcus fermentans DSM 20731 RNA-binding S4 domain-containing protein YP_003398670.1 1109891 D 591001 CDS YP_003398671.1 284048332 8737467 1110703..1111362 1 NC_013740.1 PFAM: Phosphoglycerate mutase; KEGG: pjd:Pjdr2_4563 phosphoglycerate mutase; phosphoglycerate mutase 1111362 8737467 Acfer_0983 Acidaminococcus fermentans DSM 20731 phosphoglycerate mutase YP_003398671.1 1110703 D 591001 CDS YP_003398672.1 284048333 8737469 1113303..1114085 1 NC_013740.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: tye:THEYE_A1636 electron transfer flavoprotein beta-subunit; Electron transfer flavoprotein alpha/beta- subunit 1114085 8737469 Acfer_0985 Acidaminococcus fermentans DSM 20731 Electron transfer flavoprotein alpha/beta- subunit YP_003398672.1 1113303 D 591001 CDS YP_003398673.1 284048334 8737470 1114098..1115093 1 NC_013740.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit ; Electron transfer flavoprotein alpha subunit; KEGG: bbe:BBR47_17300 electron transfer flavoprotein alpha-subunit; Electron transfer flavoprotein alpha/beta- subunit 1115093 8737470 Acfer_0986 Acidaminococcus fermentans DSM 20731 Electron transfer flavoprotein alpha/beta- subunit YP_003398673.1 1114098 D 591001 CDS YP_003398674.1 284048335 8737471 1115100..1115771 1 NC_013740.1 KEGG: drm:Dred_1965 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; DNA polymerase III subunit epsilon 1115771 8737471 Acfer_0987 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunit epsilon YP_003398674.1 1115100 D 591001 CDS YP_003398675.1 284048336 8737472 1115795..1115950 1 NC_013740.1 hypothetical protein 1115950 8737472 Acfer_0988 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398675.1 1115795 D 591001 CDS YP_003398676.1 284048337 8737473 1116281..1118191 1 NC_013740.1 KEGG: pth:PTH_1956 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain protein; Anticodon-binding domain protein; threonyl-tRNA synthetase 1118191 8737473 Acfer_0989 Acidaminococcus fermentans DSM 20731 threonyl-tRNA synthetase YP_003398676.1 1116281 D 591001 CDS YP_003398677.1 284048338 8737474 complement(1118449..1119435) 1 NC_013740.1 TIGRFAM: diaminopimelate dehydrogenase; KEGG: cpy:Cphy_2659 diaminopimelate dehydrogenase; diaminopimelate dehydrogenase 1119435 8737474 Acfer_0990 Acidaminococcus fermentans DSM 20731 diaminopimelate dehydrogenase YP_003398677.1 1118449 R 591001 CDS YP_003398678.1 284048339 8737475 complement(1119595..1120980) 1 NC_013740.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sus:Acid_3990 GDSL family lipase; G-D-S-L family lipolytic protein 1120980 8737475 Acfer_0991 Acidaminococcus fermentans DSM 20731 G-D-S-L family lipolytic protein YP_003398678.1 1119595 R 591001 CDS YP_003398679.1 284048340 8737477 1121739..1123649 1 NC_013740.1 PFAM: sulfatase; KEGG: cha:CHAB381_1777 sulfatase domain-containing protein; sulfatase 1123649 8737477 Acfer_0993 Acidaminococcus fermentans DSM 20731 sulfatase YP_003398679.1 1121739 D 591001 CDS YP_003398680.1 284048341 8737478 1123914..1124462 1 NC_013740.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: cbf:CLI_3352 rubredoxin/rubrerythrin; rubrerythrin 1124462 8737478 Acfer_0994 Acidaminococcus fermentans DSM 20731 rubrerythrin YP_003398680.1 1123914 D 591001 CDS YP_003398681.1 284048342 8737479 1124584..1126242 1 NC_013740.1 KEGG: dhd:Dhaf_0640 ATP-dependent endonuclease of the OLD family-like protein; ATP-dependent endonuclease of the OLD family- like protein 1126242 8737479 Acfer_0995 Acidaminococcus fermentans DSM 20731 ATP-dependent endonuclease of the OLD family- like protein YP_003398681.1 1124584 D 591001 CDS YP_003398682.1 284048343 8737480 1126317..1127255 1 NC_013740.1 PFAM: Auxin Efflux Carrier; KEGG: cdf:CD3169 putative transporter; auxin efflux carrier family protein 1127255 8737480 Acfer_0996 Acidaminococcus fermentans DSM 20731 auxin efflux carrier family protein YP_003398682.1 1126317 D 591001 CDS YP_003398683.1 284048344 8737481 1127330..1128013 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: hha:Hhal_0130 TetR family transcriptional regulator; transcriptional regulator, TetR family 1128013 8737481 Acfer_0997 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003398683.1 1127330 D 591001 CDS YP_003398684.1 284048345 8737482 complement(1128139..1129068) 1 NC_013740.1 KEGG: csc:Csac_1189 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-1,6-bisphosphate aldolase 1129068 8737482 Acfer_0998 Acidaminococcus fermentans DSM 20731 fructose-1,6-bisphosphate aldolase YP_003398684.1 1128139 R 591001 CDS YP_003398685.1 284048346 8737483 complement(1129092..1129949) 1 NC_013740.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; KEGG: eat:EAT1b_2755 pseudouridine synthase, RluA family; RluA family pseudouridine synthase 1129949 8737483 Acfer_0999 Acidaminococcus fermentans DSM 20731 RluA family pseudouridine synthase YP_003398685.1 1129092 R 591001 CDS YP_003398686.1 284048347 8737484 complement(1129949..1130308) 1 NC_013740.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: lba:Lebu_0217 CrcB protein; CrcB protein 1130308 8737484 Acfer_1000 Acidaminococcus fermentans DSM 20731 CrcB protein YP_003398686.1 1129949 R 591001 CDS YP_003398687.1 284048348 8737485 1130464..1130556 1 NC_013740.1 hypothetical protein 1130556 8737485 Acfer_1001 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398687.1 1130464 D 591001 CDS YP_003398688.1 284048349 8737486 1130714..1131541 1 NC_013740.1 PFAM: PP-loop domain protein; KEGG: ckr:CKR_2212 hypothetical protein; PP-loop domain-containing protein 1131541 8737486 Acfer_1002 Acidaminococcus fermentans DSM 20731 PP-loop domain-containing protein YP_003398688.1 1130714 D 591001 CDS YP_003398689.1 284048350 8737487 1131544..1132296 1 NC_013740.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: amt:Amet_0480 1-(5-phosphoribosyl)-5-amino-4- imidazole-carboxylate (AIR) carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 1132296 8737487 Acfer_1003 Acidaminococcus fermentans DSM 20731 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003398689.1 1131544 D 591001 CDS YP_003398690.1 284048351 8737488 1132301..1133686 1 NC_013740.1 PFAM: protein of unknown function DUF111; KEGG: amt:Amet_0481 hypothetical protein; hypothetical protein 1133686 8737488 Acfer_1004 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398690.1 1132301 D 591001 CDS YP_003398691.1 284048352 8737489 1133690..1134703 1 NC_013740.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cpy:Cphy_0681 cobalamin (vitamin B12) biosynthesis CbiM protein; cobalamin (vitamin B12) biosynthesis protein CbiM 1134703 8737489 Acfer_1005 Acidaminococcus fermentans DSM 20731 cobalamin (vitamin B12) biosynthesis protein CbiM YP_003398691.1 1133690 D 591001 CDS YP_003398692.1 284048353 8737490 1134678..1135448 1 NC_013740.1 PFAM: cobalt transport protein; KEGG: hmo:HM1_3001 cobalt abc transporter, permease protein CbiQ; cobalt transport protein 1135448 8737490 Acfer_1006 Acidaminococcus fermentans DSM 20731 cobalt transport protein YP_003398692.1 1134678 D 591001 CDS YP_003398693.1 284048354 8737491 1135498..1136250 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cce:Ccel_1184 cobalt ABC transporter, ATPase subunit; ABC transporter 1136250 8737491 Acfer_1007 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398693.1 1135498 D 591001 CDS YP_003398694.1 284048355 8737493 1136751..1137278 1 NC_013740.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: hor:Hore_18200 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; alkyl hydroperoxide reductase 1137278 8737493 Acfer_1009 Acidaminococcus fermentans DSM 20731 alkyl hydroperoxide reductase YP_003398694.1 1136751 D 591001 CDS YP_003398695.1 284048356 8737494 1137278..1137964 1 NC_013740.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bja:blr3508 cytochrome c-type biogenesis protein; cytochrome c biogenesis protein transmembrane region 1137964 8737494 Acfer_1010 Acidaminococcus fermentans DSM 20731 cytochrome c biogenesis protein transmembrane region YP_003398695.1 1137278 D 591001 CDS YP_003398696.1 284048357 8737495 1138189..1139412 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: apr:Apre_0397 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1139412 8737495 Acfer_1011 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003398696.1 1138189 D 591001 CDS YP_003398697.1 284048358 8737496 1139885..1140532 1 NC_013740.1 KEGG: afl:Aflv_1506 SOS-response transcriptional repressor (RecA-mediated autopeptidase); TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA family transcriptional repressor 1140532 8737496 Acfer_1012 Acidaminococcus fermentans DSM 20731 LexA family transcriptional repressor YP_003398697.1 1139885 D 591001 CDS YP_003398698.1 284048359 8737497 complement(1140676..1141917) 1 NC_013740.1 PFAM: Aluminium resistance family protein; KEGG: bcl:ABC2180 aluminum resistance protein; Aluminium resistance family protein 1141917 8737497 Acfer_1013 Acidaminococcus fermentans DSM 20731 Aluminium resistance family protein YP_003398698.1 1140676 R 591001 CDS YP_003398699.1 284048360 8737498 complement(1141972..1143786) 1 NC_013740.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: cth:Cthe_2081 small GTP-binding protein; GTP-binding proten HflX 1143786 8737498 Acfer_1014 Acidaminococcus fermentans DSM 20731 GTP-binding proten HflX YP_003398699.1 1141972 R 591001 CDS YP_003398700.1 284048361 8737499 complement(1143806..1145440) 1 NC_013740.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dsy:DSY1954 hypothetical protein; DEAD/DEAH box helicase 1145440 8737499 Acfer_1015 Acidaminococcus fermentans DSM 20731 DEAD/DEAH box helicase YP_003398700.1 1143806 R 591001 CDS YP_003398701.1 284048362 8737500 complement(1145472..1146716) 1 NC_013740.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; KEGG: dth:DICTH_1766 competence-damage inducible protein; competence/damage-inducible protein CinA 1146716 8737500 Acfer_1016 Acidaminococcus fermentans DSM 20731 competence/damage-inducible protein CinA YP_003398701.1 1145472 R 591001 CDS YP_003398702.1 284048363 8737501 complement(1146722..1148050) 1 NC_013740.1 KEGG: drm:Dred_1926 MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 1148050 8737501 Acfer_1017 Acidaminococcus fermentans DSM 20731 MiaB-like tRNA modifying enzyme YliG YP_003398702.1 1146722 R 591001 CDS YP_003398703.1 284048364 8737502 complement(1148146..1149657) 1 NC_013740.1 KEGG: sth:STH1584 hypothetical protein; hypothetical protein 1149657 8737502 Acfer_1018 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398703.1 1148146 R 591001 CDS YP_003398704.1 284048365 8737503 complement(1149703..1152024) 1 NC_013740.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; KEGG: cac:CAC1812 sporulation protein SpoIIIE, DNA segregation ATPase; cell division protein FtsK 1152024 8737503 Acfer_1019 Acidaminococcus fermentans DSM 20731 cell division protein FtsK YP_003398704.1 1149703 R 591001 CDS YP_003398705.1 284048366 8737504 complement(1152059..1153735) 1 NC_013740.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: dae:Dtox_3163 beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase 1153735 8737504 Acfer_1020 Acidaminococcus fermentans DSM 20731 RNA-metabolising metallo-beta-lactamase YP_003398705.1 1152059 R 591001 CDS YP_003398706.1 284048367 8737505 complement(1153956..1154933) 1 NC_013740.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like domain protein; KEGG: drm:Dred_3213 TRAP transporter solute receptor TAXI family protein; TRAP transporter solute receptor, TAXI family 1154933 8737505 Acfer_1021 Acidaminococcus fermentans DSM 20731 TRAP transporter solute receptor, TAXI family YP_003398706.1 1153956 R 591001 CDS YP_003398707.1 284048368 8737506 complement(1154962..1155879) 1 NC_013740.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: csc:Csac_1597 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1155879 8737506 Acfer_1022 Acidaminococcus fermentans DSM 20731 NAD-dependent epimerase/dehydratase YP_003398707.1 1154962 R 591001 CDS YP_003398708.1 284048369 8737507 complement(1155876..1156880) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: maq:Maqu_3008 hypothetical protein; hypothetical protein 1156880 8737507 Acfer_1023 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398708.1 1155876 R 591001 CDS YP_003398709.1 284048370 8737508 complement(1157004..1157957) 1 NC_013740.1 TIGRFAM: ribonuclease HIII; PFAM: ribonuclease HII/HIII; KEGG: mpl:Mpal_0022 ribonuclease HIII; ribonuclease HIII 1157957 8737508 Acfer_1024 Acidaminococcus fermentans DSM 20731 ribonuclease HIII YP_003398709.1 1157004 R 591001 CDS YP_003398710.1 284048371 8737509 complement(1157954..1158850) 1 NC_013740.1 PFAM: protein of unknown function DUF322; KEGG: cth:Cthe_2070 hypothetical protein; hypothetical protein 1158850 8737509 Acfer_1025 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398710.1 1157954 R 591001 CDS YP_003398711.1 284048372 8737510 complement(1158872..1159705) 1 NC_013740.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dae:Dtox_4086 PHP domain protein; PHP domain-containing protein 1159705 8737510 Acfer_1026 Acidaminococcus fermentans DSM 20731 PHP domain-containing protein YP_003398711.1 1158872 R 591001 CDS YP_003398712.1 284048373 8737511 complement(1159816..1159971) 1 NC_013740.1 hypothetical protein 1159971 8737511 Acfer_1027 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398712.1 1159816 R 591001 CDS YP_003398713.1 284048374 8737512 complement(1159992..1160465) 1 NC_013740.1 KEGG: dda:Dd703_0812 hypothetical protein; hypothetical protein 1160465 8737512 Acfer_1028 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398713.1 1159992 R 591001 CDS YP_003398714.1 284048375 8737513 complement(1160632..1161846) 1 NC_013740.1 PFAM: major facilitator superfamily MFS_1; KEGG: lmc:Lm4b_01258 antibiotic resistance protein; major facilitator superfamily protein 1161846 8737513 Acfer_1029 Acidaminococcus fermentans DSM 20731 major facilitator superfamily protein YP_003398714.1 1160632 R 591001 CDS YP_003398715.1 284048376 8737514 complement(1161987..1162916) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cac:CAC0768 LysR family transcriptional regulator; LysR family transcriptional regulator 1162916 8737514 Acfer_1030 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398715.1 1161987 R 591001 CDS YP_003398716.1 284048377 8737515 complement(1162983..1164323) 1 NC_013740.1 KEGG: bpd:BURPS668_1882 TadE family protein; hypothetical protein 1164323 8737515 Acfer_1031 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398716.1 1162983 R 591001 CDS YP_003398717.1 284048378 8737516 complement(1164363..1164998) 1 NC_013740.1 PFAM: peptidase A24A prepilin type IV; KEGG: pth:PTH_1144 type II secretory pathway, prepilin signal peptidase PulO and related peptidases; peptidase A24A prepilin type IV 1164998 8737516 Acfer_1032 Acidaminococcus fermentans DSM 20731 peptidase A24A prepilin type IV YP_003398717.1 1164363 R 591001 CDS YP_003398718.1 284048379 8737517 complement(1165088..1167010) 1 NC_013740.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; KEGG: cbt:CLH_2044 heat-responsive suppressor HrsA; PTS system fructose subfamily transporter subunit IIC 1167010 8737517 Acfer_1033 Acidaminococcus fermentans DSM 20731 PTS system fructose subfamily transporter subunit IIC YP_003398718.1 1165088 R 591001 CDS YP_003398719.1 284048380 8737518 complement(1167012..1167914) 1 NC_013740.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: ere:EUBREC_0018 fructose-1-phosphate kinase; 1-phosphofructokinase 1167914 8737518 Acfer_1034 Acidaminococcus fermentans DSM 20731 1-phosphofructokinase YP_003398719.1 1167012 R 591001 CDS YP_003398720.1 284048381 8737519 complement(1167986..1168837) 1 NC_013740.1 PFAM: YdjC family protein; KEGG: mag:amb3100 hypothetical protein; hypothetical protein 1168837 8737519 Acfer_1035 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398720.1 1167986 R 591001 CDS YP_003398721.1 284048382 8737520 1169102..1169707 1 NC_013740.1 KEGG: cpy:Cphy_0344 membrane protein-like protein; hypothetical protein 1169707 8737520 Acfer_1036 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398721.1 1169102 D 591001 CDS YP_003398722.1 284048383 8737521 1169865..1170833 1 NC_013740.1 PFAM: Lactate/malate dehydrogenase; KEGG: blt:Balat_0321 L-lactate dehydrogenase; lactate/malate dehydrogenase 1170833 8737521 Acfer_1037 Acidaminococcus fermentans DSM 20731 lactate/malate dehydrogenase YP_003398722.1 1169865 D 591001 CDS YP_003398723.1 284048384 8737522 complement(1170865..1172145) 1 NC_013740.1 PFAM: peptidase M18 aminopeptidase I; KEGG: ere:EUBREC_2386 aspartyl aminopeptidase; aspartyl aminopeptidase 1172145 8737522 Acfer_1038 Acidaminococcus fermentans DSM 20731 aspartyl aminopeptidase YP_003398723.1 1170865 R 591001 CDS YP_003398724.1 284048385 8737523 1172270..1173715 1 NC_013740.1 PFAM: amino acid permease-associated region; KEGG: cbt:CLH_0986 amino acid permease family protein; amino acid permease 1173715 8737523 Acfer_1039 Acidaminococcus fermentans DSM 20731 amino acid permease YP_003398724.1 1172270 D 591001 CDS YP_003398725.1 284048386 8737524 complement(1173856..1175166) 1 NC_013740.1 PFAM: peptidase C1B bleomycin hydrolase; KEGG: lpj:JDM1_0540 cysteine aminopeptidase; Bleomycin hydrolase 1175166 8737524 Acfer_1040 Acidaminococcus fermentans DSM 20731 Bleomycin hydrolase YP_003398725.1 1173856 R 591001 CDS YP_003398726.1 284048387 8737525 complement(1175270..1176190) 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cdf:CD2829 hypothetical protein; hypothetical protein 1176190 8737525 Acfer_1041 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398726.1 1175270 R 591001 CDS YP_003398727.1 284048388 8737526 complement(1176212..1177849) 1 NC_013740.1 KEGG: amt:Amet_2923 hypothetical protein; hypothetical protein 1177849 8737526 Acfer_1042 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398727.1 1176212 R 591001 CDS YP_003398728.1 284048389 8737527 complement(1178011..1178253) 1 NC_013740.1 PFAM: Uncharacterised conserved protein UCP037246; KEGG: ere:EUBREC_1717 hypothetical protein; hypothetical protein 1178253 8737527 Acfer_1043 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398728.1 1178011 R 591001 CDS YP_003398729.1 284048390 8737528 complement(1178370..1180112) 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: lbu:LBUL_1203 ABC-type multidrug transport system, ATPase and permease component; ABC transporter 1180112 8737528 Acfer_1044 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398729.1 1178370 R 591001 CDS YP_003398730.1 284048391 8737529 complement(1180112..1181869) 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cth:Cthe_0396 ABC transporter related protein; ABC transporter 1181869 8737529 Acfer_1045 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398730.1 1180112 R 591001 CDS YP_003398731.1 284048392 8737530 1181978..1182832 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC2394 LysR family transcriptional regulator; LysR family transcriptional regulator 1182832 8737530 Acfer_1046 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398731.1 1181978 D 591001 CDS YP_003398732.1 284048393 8737531 complement(1182904..1183395) 1 NC_013740.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: apv:Apar_1162 protein tyrosine phosphatase; protein tyrosine phosphatase 1183395 8737531 Acfer_1047 Acidaminococcus fermentans DSM 20731 protein tyrosine phosphatase YP_003398732.1 1182904 R 591001 CDS YP_003398733.1 284048394 8737532 1184362..1184766 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 1184766 8737532 Acfer_1048 Acidaminococcus fermentans DSM 20731 putative transposase YP_003398733.1 1184362 D 591001 CDS YP_003398734.1 284048395 8737533 1184778..1185776 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 1185776 8737533 Acfer_1049 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003398734.1 1184778 D 591001 CDS YP_003398735.1 284048396 8737534 complement(1185969..1186538) 1 NC_013740.1 KEGG: cbe:Cbei_2571 hypothetical protein; hypothetical protein 1186538 8737534 Acfer_1050 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398735.1 1185969 R 591001 CDS YP_003398736.1 284048397 8737535 complement(1187155..1187442) 1 NC_013740.1 KEGG: bbe:BBR47_58550 hypothetical protein; hypothetical protein 1187442 8737535 Acfer_1051 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398736.1 1187155 R 591001 CDS YP_003398737.1 284048398 8737536 complement(1187448..1189397) 1 NC_013740.1 PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: mgm:Mmc1_2003 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 1189397 8737536 Acfer_1052 Acidaminococcus fermentans DSM 20731 Sel1 domain-containing protein repeat-containing protein YP_003398737.1 1187448 R 591001 CDS YP_003398738.1 284048399 8737537 complement(1189403..1191271) 1 NC_013740.1 KEGG: rca:Rcas_4101 hypothetical protein; hypothetical protein 1191271 8737537 Acfer_1053 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398738.1 1189403 R 591001 CDS YP_003398739.1 284048400 8737539 complement(1191632..1191997) 1 NC_013740.1 KEGG: cce:Ccel_2968 hypothetical protein; hypothetical protein 1191997 8737539 Acfer_1055 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398739.1 1191632 R 591001 CDS YP_003398740.1 284048401 8737540 complement(1192675..1193529) 1 NC_013740.1 hypothetical protein 1193529 8737540 Acfer_1056 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398740.1 1192675 R 591001 CDS YP_003398741.1 284048402 8737541 complement(1193672..1194970) 1 NC_013740.1 PFAM: integrase family protein; Tn916 integrase domain protein DNA binding; KEGG: cdf:CD1091 integrase; integrase family protein 1194970 8737541 Acfer_1057 Acidaminococcus fermentans DSM 20731 integrase family protein YP_003398741.1 1193672 R 591001 CDS YP_003398742.1 284048403 8737542 complement(1195035..1195238) 1 NC_013740.1 PFAM: Excisionase from transposon Tn916; KEGG: sss:SSUSC84_0824 excisionase; transposon Tn916 excisionase 1195238 8737542 Acfer_1058 Acidaminococcus fermentans DSM 20731 transposon Tn916 excisionase YP_003398742.1 1195035 R 591001 CDS YP_003398743.1 284048404 8737543 complement(1195412..1195882) 1 NC_013740.1 hypothetical protein 1195882 8737543 Acfer_1059 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398743.1 1195412 R 591001 CDS YP_003398744.1 284048405 8737544 1196181..1197362 1 NC_013740.1 PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: mei:Msip34_0959 heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein 1197362 8737544 Acfer_1060 Acidaminococcus fermentans DSM 20731 heat shock protein DnaJ domain-containing protein YP_003398744.1 1196181 D 591001 CDS YP_003398745.1 284048406 8737545 1197352..1197837 1 NC_013740.1 hypothetical protein 1197837 8737545 Acfer_1061 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398745.1 1197352 D 591001 CDS YP_003398746.1 284048407 8737546 1197996..1198589 1 NC_013740.1 hypothetical protein 1198589 8737546 Acfer_1062 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398746.1 1197996 D 591001 CDS YP_003398747.1 284048408 8737547 1198813..1199265 1 NC_013740.1 KEGG: gvi:gll2583 hypothetical protein; hypothetical protein 1199265 8737547 Acfer_1063 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398747.1 1198813 D 591001 CDS YP_003398748.1 284048409 8737548 1199289..1199741 1 NC_013740.1 KEGG: gvi:gll2583 hypothetical protein; hypothetical protein 1199741 8737548 Acfer_1064 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398748.1 1199289 D 591001 CDS YP_003398749.1 284048410 8737549 1199808..1200056 1 NC_013740.1 hypothetical protein 1200056 8737549 Acfer_1065 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398749.1 1199808 D 591001 CDS YP_003398750.1 284048411 8737550 complement(1200120..1201556) 1 NC_013740.1 PFAM: sodium/sulphate symporter; KEGG: lcb:LCABL_04300 sodium-dependent dicarboxylate transporter SdcS (Na(+)/dicarboxylate symporter); sodium/sulfate symporter 1201556 8737550 Acfer_1066 Acidaminococcus fermentans DSM 20731 sodium/sulfate symporter YP_003398750.1 1200120 R 591001 CDS YP_003398751.1 284048412 8737551 complement(1201573..1202829) 1 NC_013740.1 PFAM: HI0933 family protein; KEGG: aac:Aaci_1630 FAD dependent oxidoreductase; hypothetical protein 1202829 8737551 Acfer_1067 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398751.1 1201573 R 591001 CDS YP_003398752.1 284048413 8737552 1202963..1203850 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pth:PTH_1546 transcriptional regulator; LysR family transcriptional regulator 1203850 8737552 Acfer_1068 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398752.1 1202963 D 591001 CDS YP_003398753.1 284048414 8737553 complement(1203927..1204643) 1 NC_013740.1 PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_4241 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 1204643 8737553 Acfer_1069 Acidaminococcus fermentans DSM 20731 alpha/beta hydrolase fold protein YP_003398753.1 1203927 R 591001 CDS YP_003398754.1 284048415 8737554 complement(1204657..1205961) 1 NC_013740.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: asu:Asuc_1303 citrate transporter; CitMHS family citrate/H+ symporter 1205961 8737554 Acfer_1070 Acidaminococcus fermentans DSM 20731 CitMHS family citrate/H+ symporter YP_003398754.1 1204657 R 591001 CDS YP_003398755.1 284048416 8737555 complement(1205976..1206812) 1 NC_013740.1 PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC02183 putative arylesterase, non-heme chloride peroxidase; alpha/beta hydrolase fold protein 1206812 8737555 Acfer_1071 Acidaminococcus fermentans DSM 20731 alpha/beta hydrolase fold protein YP_003398755.1 1205976 R 591001 CDS YP_003398756.1 284048417 8737556 1206934..1207851 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC1046 LysR family transcriptional regulator; LysR family transcriptional regulator 1207851 8737556 Acfer_1072 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003398756.1 1206934 D 591001 CDS YP_003398757.1 284048418 8737557 1208122..1208478 1 NC_013740.1 PFAM: protein of unknown function DUF891; KEGG: ere:EUBREC_3011 hypothetical protein; hypothetical protein 1208478 8737557 Acfer_1073 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398757.1 1208122 D 591001 CDS YP_003398758.1 284048419 8737558 1208475..1208768 1 NC_013740.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ere:EUBREC_3010 hypothetical protein; XRE family transcriptional regulator 1208768 8737558 Acfer_1074 Acidaminococcus fermentans DSM 20731 XRE family transcriptional regulator YP_003398758.1 1208475 D 591001 CDS YP_003398759.1 284048420 8737559 complement(1208850..1208996) 1 NC_013740.1 KEGG: hmo:HM1_2958 phage terminase, large subunit, putative; phage terminase, large subunit 1208996 8737559 Acfer_1075 Acidaminococcus fermentans DSM 20731 phage terminase, large subunit YP_003398759.1 1208850 R 591001 CDS YP_003398760.1 284048421 8737560 complement(1209074..1209517) 1 NC_013740.1 KEGG: amt:Amet_4035 hypothetical protein; hypothetical protein 1209517 8737560 Acfer_1076 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398760.1 1209074 R 591001 CDS YP_003398761.1 284048422 8737561 complement(1209678..1210574) 1 NC_013740.1 KEGG: ckr:CKR_3419 hypothetical protein; hypothetical protein 1210574 8737561 Acfer_1077 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398761.1 1209678 R 591001 CDS YP_003398762.1 284048423 8737562 complement(1210675..1210908) 1 NC_013740.1 KEGG: det:DET1090 hypothetical protein; hypothetical protein 1210908 8737562 Acfer_1078 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398762.1 1210675 R 591001 CDS YP_003398763.1 284048424 8737563 complement(1210892..1211698) 1 NC_013740.1 KEGG: det:DET1091 virulence-related protein; virulence-like protein 1211698 8737563 Acfer_1079 Acidaminococcus fermentans DSM 20731 virulence-like protein YP_003398763.1 1210892 R 591001 CDS YP_003398764.1 284048425 8737564 complement(1211786..1213036) 1 NC_013740.1 PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: hmo:HM1_2946 DNA methylase; DNA methylase N-4/N-6 domain-containing protein 1213036 8737564 Acfer_1080 Acidaminococcus fermentans DSM 20731 DNA methylase N-4/N-6 domain-containing protein YP_003398764.1 1211786 R 591001 CDS YP_003398765.1 284048426 8737565 complement(1213049..1213576) 1 NC_013740.1 KEGG: tex:Teth514_1242 hypothetical protein; hypothetical protein 1213576 8737565 Acfer_1081 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398765.1 1213049 R 591001 CDS YP_003398766.1 284048427 8737566 complement(1213737..1214123) 1 NC_013740.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: det:DET1094 HNH endonuclease domain- containing protein; HNH endonuclease 1214123 8737566 Acfer_1082 Acidaminococcus fermentans DSM 20731 HNH endonuclease YP_003398766.1 1213737 R 591001 CDS YP_003398767.1 284048428 8737567 1214251..1214679 1 NC_013740.1 hypothetical protein 1214679 8737567 Acfer_1083 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398767.1 1214251 D 591001 CDS YP_003398768.1 284048429 8737568 complement(1214771..1215223) 1 NC_013740.1 KEGG: det:DET1095 hypothetical protein; hypothetical protein 1215223 8737568 Acfer_1084 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398768.1 1214771 R 591001 CDS YP_003398769.1 284048430 8737569 complement(1215220..1216569) 1 NC_013740.1 PFAM: SNF2-related protein; SMART: DEAD-like helicase; KEGG: det:DET1096 SNF2 domain-containing protein; SNF2-related protein 1216569 8737569 Acfer_1085 Acidaminococcus fermentans DSM 20731 SNF2-related protein YP_003398769.1 1215220 R 591001 CDS YP_003398770.1 284048431 8737570 complement(1216566..1216868) 1 NC_013740.1 PFAM: VRR-NUC domain protein; KEGG: det:DET1097 hypothetical protein; VRR-NUC domain-containing protein 1216868 8737570 Acfer_1086 Acidaminococcus fermentans DSM 20731 VRR-NUC domain-containing protein YP_003398770.1 1216566 R 591001 CDS YP_003398771.1 284048432 8737571 complement(1216979..1217176) 1 NC_013740.1 hypothetical protein 1217176 8737571 Acfer_1087 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398771.1 1216979 R 591001 CDS YP_003398772.1 284048433 8737572 complement(1217314..1218432) 1 NC_013740.1 TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: sak:SAK_0730 prophage LambdaSa04, DNA primase; P4 family phage/plasmid primase 1218432 8737572 Acfer_1088 Acidaminococcus fermentans DSM 20731 P4 family phage/plasmid primase YP_003398772.1 1217314 R 591001 CDS YP_003398773.1 284048434 8737573 complement(1218429..1219601) 1 NC_013740.1 KEGG: sak:SAK_0730 prophage LambdaSa04, DNA primase; prophage LambdaSa04, DNA primase 1219601 8737573 Acfer_1089 Acidaminococcus fermentans DSM 20731 prophage LambdaSa04, DNA primase YP_003398773.1 1218429 R 591001 CDS YP_003398774.1 284048435 8737574 complement(1219602..1220000) 1 NC_013740.1 KEGG: hmo:HM1_2897 hypothetical protein; hypothetical protein 1220000 8737574 Acfer_1090 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398774.1 1219602 R 591001 CDS YP_003398775.1 284048436 8737575 complement(1219972..1220202) 1 NC_013740.1 KEGG: amt:Amet_4051 hypothetical protein; hypothetical protein 1220202 8737575 Acfer_1091 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398775.1 1219972 R 591001 CDS YP_003398776.1 284048437 8737576 1220438..1221154 1 NC_013740.1 hypothetical protein 1221154 8737576 Acfer_1092 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398776.1 1220438 D 591001 CDS YP_003398777.1 284048438 8737577 complement(1221209..1224124) 1 NC_013740.1 PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; KEGG: det:DET1100 family A DNA-dependent DNA polymerase; DNA-directed DNA polymerase 1224124 8737577 Acfer_1093 Acidaminococcus fermentans DSM 20731 DNA-directed DNA polymerase YP_003398777.1 1221209 R 591001 CDS YP_003398778.1 284048439 8737578 complement(1224188..1224754) 1 NC_013740.1 KEGG: det:DET1101 hypothetical protein; hypothetical protein 1224754 8737578 Acfer_1094 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398778.1 1224188 R 591001 CDS YP_003398779.1 284048440 8737579 complement(1224747..1225895) 1 NC_013740.1 KEGG: det:DET1102 hypothetical protein; hypothetical protein 1225895 8737579 Acfer_1095 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398779.1 1224747 R 591001 CDS YP_003398780.1 284048441 8737580 complement(1225885..1226196) 1 NC_013740.1 KEGG: hmo:HM1_2933 hypothetical protein; hypothetical protein 1226196 8737580 Acfer_1096 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398780.1 1225885 R 591001 CDS YP_003398781.1 284048442 8737581 complement(1226162..1226347) 1 NC_013740.1 hypothetical protein 1226347 8737581 Acfer_1097 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398781.1 1226162 R 591001 CDS YP_003398782.1 284048443 8737582 complement(1226474..1227049) 1 NC_013740.1 PFAM: Sigma-70 region 4 type 2; KEGG: hmo:HM1_2931 hypothetical protein; putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily 1227049 8737582 Acfer_1098 Acidaminococcus fermentans DSM 20731 putative RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily YP_003398782.1 1226474 R 591001 CDS YP_003398783.1 284048444 8737583 complement(1227328..1227522) 1 NC_013740.1 hypothetical protein 1227522 8737583 Acfer_1099 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398783.1 1227328 R 591001 CDS YP_003398784.1 284048445 8737584 complement(1228216..1228980) 1 NC_013740.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dps:DP1551 hypothetical protein; Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase 1228980 8737584 Acfer_1100 Acidaminococcus fermentans DSM 20731 Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase YP_003398784.1 1228216 R 591001 CDS YP_003398785.1 284048446 8737585 complement(1229277..1230272) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: oih:OB2837 hypothetical protein; hypothetical protein 1230272 8737585 Acfer_1101 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398785.1 1229277 R 591001 CDS YP_003398786.1 284048447 8737586 complement(1230298..1231812) 1 NC_013740.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: oih:OB2838 hypothetical protein; hypothetical protein 1231812 8737586 Acfer_1102 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398786.1 1230298 R 591001 CDS YP_003398787.1 284048448 8737587 complement(1231829..1232314) 1 NC_013740.1 KEGG: oih:OB2839 hypothetical protein; hypothetical protein 1232314 8737587 Acfer_1103 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398787.1 1231829 R 591001 CDS YP_003398788.1 284048449 8737588 complement(1232368..1233063) 1 NC_013740.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cce:Ccel_1263 GntR domain protein; GntR family transcriptional regulator 1233063 8737588 Acfer_1104 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003398788.1 1232368 R 591001 CDS YP_003398789.1 284048450 8737590 complement(1234146..1234514) 1 NC_013740.1 KEGG: cpy:Cphy_1511 hypothetical protein; hypothetical protein 1234514 8737590 Acfer_1106 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398789.1 1234146 R 591001 CDS YP_003398790.1 284048451 8737591 complement(1234677..1237433) 1 NC_013740.1 KEGG: cya:CYA_1293 putative type III restriction- modification system, res subunit; putative type III restriction-modification system, res subunit 1237433 8737591 Acfer_1107 Acidaminococcus fermentans DSM 20731 putative type III restriction-modification system, res subunit YP_003398790.1 1234677 R 591001 CDS YP_003398791.1 284048452 8737592 complement(1237433..1240000) 1 NC_013740.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rci:LRC82 putative type III restriction- modification system, methylation subunit; DNA methylase N-4/N-6 domain-containing protein 1240000 8737592 Acfer_1108 Acidaminococcus fermentans DSM 20731 DNA methylase N-4/N-6 domain-containing protein YP_003398791.1 1237433 R 591001 CDS YP_003398792.1 284048453 8737593 complement(1240102..1242330) 1 NC_013740.1 PFAM: NUDIX hydrolase; Protein of unknown function DUF2075; KEGG: lba:Lebu_0123 hypothetical protein; NUDIX hydrolase 1242330 8737593 Acfer_1109 Acidaminococcus fermentans DSM 20731 NUDIX hydrolase YP_003398792.1 1240102 R 591001 CDS YP_003398793.1 284048454 8737594 complement(1243522..1244091) 1 NC_013740.1 KEGG: cbe:Cbei_2571 hypothetical protein; hypothetical protein 1244091 8737594 Acfer_1110 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398793.1 1243522 R 591001 CDS YP_003398794.1 284048455 8737595 complement(1244110..1244682) 1 NC_013740.1 KEGG: ckl:CKL_1965 hypothetical protein; hypothetical protein 1244682 8737595 Acfer_1111 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398794.1 1244110 R 591001 CDS YP_003398795.1 284048456 8737596 complement(1245047..1245376) 1 NC_013740.1 hypothetical protein 1245376 8737596 Acfer_1112 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398795.1 1245047 R 591001 CDS YP_003398796.1 284048457 8737597 complement(1245407..1246138) 1 NC_013740.1 KEGG: bbe:BBR47_58550 hypothetical protein; hypothetical protein 1246138 8737597 Acfer_1113 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398796.1 1245407 R 591001 CDS YP_003398797.1 284048458 8737599 1247489..1247686 1 NC_013740.1 KEGG: sru:SRU_0755 hypothetical protein; hypothetical protein 1247686 8737599 Acfer_1115 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398797.1 1247489 D 591001 CDS YP_003398798.1 284048459 8737600 1247993..1248235 1 NC_013740.1 KEGG: lsl:LSL_1389 hypothetical protein; hypothetical protein 1248235 8737600 Acfer_1116 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398798.1 1247993 D 591001 CDS YP_003398799.1 284048460 8737601 1248232..1248609 1 NC_013740.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: ctc:CTC01933 death on curing protein; death-on-curing family protein 1248609 8737601 Acfer_1117 Acidaminococcus fermentans DSM 20731 death-on-curing family protein YP_003398799.1 1248232 D 591001 CDS YP_003398800.1 284048461 8737602 1249306..1249548 1 NC_013740.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cbb:CLD_A0041 hypothetical protein; XRE family transcriptional regulator 1249548 8737602 Acfer_1118 Acidaminococcus fermentans DSM 20731 XRE family transcriptional regulator YP_003398800.1 1249306 D 591001 CDS YP_003398801.1 284048462 8737603 complement(1249641..1249793) 1 NC_013740.1 hypothetical protein 1249793 8737603 Acfer_1119 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398801.1 1249641 R 591001 CDS YP_003398802.1 284048463 8737604 complement(1249777..1249980) 1 NC_013740.1 KEGG: eca:ECA1669A hypothetical protein; hypothetical protein 1249980 8737604 Acfer_1120 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398802.1 1249777 R 591001 CDS YP_003398803.1 284048464 8737605 complement(1250346..1251077) 1 NC_013740.1 KEGG: bbe:BBR47_58550 hypothetical protein; hypothetical protein 1251077 8737605 Acfer_1121 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398803.1 1250346 R 591001 CDS YP_003398804.1 284048465 8737606 complement(1251425..1252717) 1 NC_013740.1 PFAM: integrase family protein; Tn916 integrase domain protein DNA binding; KEGG: sss:SSUSC84_0823 integrase; integrase family protein 1252717 8737606 Acfer_1122 Acidaminococcus fermentans DSM 20731 integrase family protein YP_003398804.1 1251425 R 591001 CDS YP_003398805.1 284048466 8737607 complement(1252786..1252995) 1 NC_013740.1 PFAM: Excisionase from transposon Tn916; KEGG: cdf:CD0356 excisionase; transposon Tn916 excisionase 1252995 8737607 Acfer_1123 Acidaminococcus fermentans DSM 20731 transposon Tn916 excisionase YP_003398805.1 1252786 R 591001 CDS YP_003398806.1 284048467 8737608 complement(1253107..1253541) 1 NC_013740.1 KEGG: pfl:PFL_0369 M24/M37 family peptidase; M24/M37 family peptidase 1253541 8737608 Acfer_1124 Acidaminococcus fermentans DSM 20731 M24/M37 family peptidase YP_003398806.1 1253107 R 591001 CDS YP_003398807.1 284048468 8737609 complement(1253657..1254211) 1 NC_013740.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: tte:TTE2424 N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 1254211 8737609 Acfer_1125 Acidaminococcus fermentans DSM 20731 cell wall hydrolase/autolysin YP_003398807.1 1253657 R 591001 CDS YP_003398808.1 284048469 8737610 complement(1254208..1254522) 1 NC_013740.1 hypothetical protein 1254522 8737610 Acfer_1126 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398808.1 1254208 R 591001 CDS YP_003398809.1 284048470 8737611 complement(1254507..1254806) 1 NC_013740.1 hypothetical protein 1254806 8737611 Acfer_1127 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398809.1 1254507 R 591001 CDS YP_003398810.1 284048471 8737612 complement(1254824..1255042) 1 NC_013740.1 KEGG: amt:Amet_4051 hypothetical protein; hypothetical protein 1255042 8737612 Acfer_1128 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398810.1 1254824 R 591001 CDS YP_003398811.1 284048472 8737613 1255262..1256014 1 NC_013740.1 hypothetical protein 1256014 8737613 Acfer_1129 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398811.1 1255262 D 591001 CDS YP_003398812.1 284048473 8737614 1256042..1256548 1 NC_013740.1 hypothetical protein 1256548 8737614 Acfer_1130 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398812.1 1256042 D 591001 CDS YP_003398813.1 284048474 8737615 complement(1256938..1258926) 1 NC_013740.1 PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; KEGG: det:DET1100 family A DNA-dependent DNA polymerase; DNA-directed DNA polymerase 1258926 8737615 Acfer_1131 Acidaminococcus fermentans DSM 20731 DNA-directed DNA polymerase YP_003398813.1 1256938 R 591001 CDS YP_003398814.1 284048475 8737616 complement(1258987..1259166) 1 NC_013740.1 hypothetical protein 1259166 8737616 Acfer_1132 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398814.1 1258987 R 591001 CDS YP_003398815.1 284048476 8737617 complement(1259180..1259635) 1 NC_013740.1 KEGG: hmo:HM1_2935 hypothetical protein; hypothetical protein 1259635 8737617 Acfer_1133 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398815.1 1259180 R 591001 CDS YP_003398816.1 284048477 8737618 complement(1259651..1260799) 1 NC_013740.1 KEGG: det:DET1102 hypothetical protein; hypothetical protein 1260799 8737618 Acfer_1134 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398816.1 1259651 R 591001 CDS YP_003398817.1 284048478 8737619 complement(1260789..1261100) 1 NC_013740.1 KEGG: bca:BCE_0374 rRNA biogenesis protein rrp5, putative; rRNA biogenesis protein rrp5 1261100 8737619 Acfer_1135 Acidaminococcus fermentans DSM 20731 rRNA biogenesis protein rrp5 YP_003398817.1 1260789 R 591001 CDS YP_003398818.1 284048479 8737620 complement(1261066..1261251) 1 NC_013740.1 hypothetical protein 1261251 8737620 Acfer_1136 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398818.1 1261066 R 591001 CDS YP_003398819.1 284048480 8737621 complement(1261381..1261956) 1 NC_013740.1 PFAM: Sigma-70 region 4 type 2; KEGG: hmo:HM1_2931 hypothetical protein; sigma-70 region 4 type 2 1261956 8737621 Acfer_1137 Acidaminococcus fermentans DSM 20731 sigma-70 region 4 type 2 YP_003398819.1 1261381 R 591001 CDS YP_003398820.1 284048481 8737622 1262337..1263263 1 NC_013740.1 KEGG: tex:Teth514_1229 hypothetical protein; hypothetical protein 1263263 8737622 Acfer_1138 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398820.1 1262337 D 591001 CDS YP_003398821.1 284048482 8737623 1263256..1263717 1 NC_013740.1 KEGG: tex:Teth514_1228 hypothetical protein; hypothetical protein 1263717 8737623 Acfer_1139 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398821.1 1263256 D 591001 CDS YP_003398822.1 284048483 8737625 complement(1265883..1266194) 1 NC_013740.1 hypothetical protein 1266194 8737625 Acfer_1141 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398822.1 1265883 R 591001 CDS YP_003398823.1 284048484 8737626 complement(1266285..1266476) 1 NC_013740.1 hypothetical protein 1266476 8737626 Acfer_1142 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398823.1 1266285 R 591001 CDS YP_003398824.1 284048485 8737628 complement(1267537..1268349) 1 NC_013740.1 KEGG: sss:SSUSC84_1113 hypothetical protein; hypothetical protein 1268349 8737628 Acfer_1144 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398824.1 1267537 R 591001 CDS YP_003398825.1 284048486 8737629 complement(1268481..1269641) 1 NC_013740.1 KEGG: apv:Apar_1241 hypothetical protein; hypothetical protein 1269641 8737629 Acfer_1145 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398825.1 1268481 R 591001 CDS YP_003398826.1 284048487 8737630 complement(1269638..1269994) 1 NC_013740.1 hypothetical protein 1269994 8737630 Acfer_1146 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398826.1 1269638 R 591001 CDS YP_003398827.1 284048488 8737631 complement(1270144..1270563) 1 NC_013740.1 hypothetical protein 1270563 8737631 Acfer_1147 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398827.1 1270144 R 591001 CDS YP_003398828.1 284048489 8737632 complement(1270791..1271195) 1 NC_013740.1 hypothetical protein 1271195 8737632 Acfer_1148 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398828.1 1270791 R 591001 CDS YP_003398829.1 284048490 8737633 complement(1271279..1271917) 1 NC_013740.1 KEGG: hypothetical protein; hypothetical protein 1271917 8737633 Acfer_1149 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398829.1 1271279 R 591001 CDS YP_003398830.1 284048491 8737634 complement(1272153..1272812) 1 NC_013740.1 TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: shi:Shel_12070 permease, glycerol uptake facilitator; MIP family channel protein 1272812 8737634 Acfer_1150 Acidaminococcus fermentans DSM 20731 MIP family channel protein YP_003398830.1 1272153 R 591001 CDS YP_003398831.1 284048492 8737635 complement(1272900..1279103) 1 NC_013740.1 PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: pmu:PM0714 Hsf; S-layer protein 1279103 8737635 Acfer_1151 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003398831.1 1272900 R 591001 CDS YP_003398832.1 284048493 8737637 complement(1280666..1281964) 1 NC_013740.1 PFAM: Resolvase domain; Recombinase; KEGG: spa:M6_Spy1125 site-specific recombinase; resolvase domain-containing protein 1281964 8737637 Acfer_1153 Acidaminococcus fermentans DSM 20731 resolvase domain-containing protein YP_003398832.1 1280666 R 591001 CDS YP_003398833.1 284048494 8737638 complement(1282010..1282174) 1 NC_013740.1 hypothetical protein 1282174 8737638 Acfer_1154 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398833.1 1282010 R 591001 CDS YP_003398834.1 284048495 8737640 complement(1282842..1283285) 1 NC_013740.1 hypothetical protein 1283285 8737640 Acfer_1156 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398834.1 1282842 R 591001 CDS YP_003398835.1 284048496 8737641 complement(1283368..1283523) 1 NC_013740.1 hypothetical protein 1283523 8737641 Acfer_1157 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398835.1 1283368 R 591001 CDS YP_003398836.1 284048497 8737643 1284945..1285349 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 1285349 8737643 Acfer_1159 Acidaminococcus fermentans DSM 20731 putative transposase YP_003398836.1 1284945 D 591001 CDS YP_003398837.1 284048498 8737644 1285361..1286359 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 1286359 8737644 Acfer_1160 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003398837.1 1285361 D 591001 CDS YP_003398838.1 284048499 8737645 1286716..1287084 1 NC_013740.1 PFAM: protein of unknown function DUF891; KEGG: ere:EUBREC_3676 hypothetical protein; hypothetical protein 1287084 8737645 Acfer_1161 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398838.1 1286716 D 591001 CDS YP_003398839.1 284048500 8737646 1287081..1287359 1 NC_013740.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ere:EUBREC_3677 hypothetical protein; XRE family transcriptional regulator 1287359 8737646 Acfer_1162 Acidaminococcus fermentans DSM 20731 XRE family transcriptional regulator YP_003398839.1 1287081 D 591001 CDS YP_003398840.1 284048501 8737647 1287789..1288838 1 NC_013740.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: dae:Dtox_3993 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic 1288838 8737647 Acfer_1163 Acidaminococcus fermentans DSM 20731 filamentation induced by cAMP protein fic YP_003398840.1 1287789 D 591001 CDS YP_003398841.1 284048502 8737648 complement(1289611..1290264) 1 NC_013740.1 KEGG: bpu:BPUM_3130 thioredoxin; thioredoxin 1290264 8737648 Acfer_1164 Acidaminococcus fermentans DSM 20731 thioredoxin YP_003398841.1 1289611 R 591001 CDS YP_003398842.1 284048503 8737649 complement(1290296..1291174) 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: shi:Shel_02260 Fe-S oxidoreductase; radical SAM protein 1291174 8737649 Acfer_1165 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003398842.1 1290296 R 591001 CDS YP_003398843.1 284048504 8737650 complement(1291416..1292525) 1 NC_013740.1 TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: gwc:GWCH70_3000 transposase, IS605 OrfB family; transposase, IS605 OrfB family 1292525 8737650 Acfer_1166 Acidaminococcus fermentans DSM 20731 transposase, IS605 OrfB family YP_003398843.1 1291416 R 591001 CDS YP_003398844.1 284048505 8737651 complement(1292533..1292928) 1 NC_013740.1 PFAM: transposase IS200-family protein; KEGG: gwc:GWCH70_3001 transposase IS200-family protein; transposase IS200-family protein 1292928 8737651 Acfer_1167 Acidaminococcus fermentans DSM 20731 transposase IS200-family protein YP_003398844.1 1292533 R 591001 CDS YP_003398845.1 284048506 8737652 complement(1293073..1293387) 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ccv:CCV52592_2058 ArsR family transcriptional regulator; ArsR family transcriptional regulator 1293387 8737652 Acfer_1168 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003398845.1 1293073 R 591001 CDS YP_003398846.1 284048507 8737653 complement(1294053..1294676) 1 NC_013740.1 PFAM: Methyltransferase type 11; KEGG: ckr:CKR_3382 hypothetical protein; type 11 methyltransferase 1294676 8737653 Acfer_1169 Acidaminococcus fermentans DSM 20731 type 11 methyltransferase YP_003398846.1 1294053 R 591001 CDS YP_003398847.1 284048508 8737655 complement(1295497..1295697) 1 NC_013740.1 hypothetical protein 1295697 8737655 Acfer_1171 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398847.1 1295497 R 591001 CDS YP_003398848.1 284048509 8737656 complement(1295708..1296637) 1 NC_013740.1 PFAM: integrase family protein; KEGG: hso:HS_0555 phage integrase; integrase family protein 1296637 8737656 Acfer_1172 Acidaminococcus fermentans DSM 20731 integrase family protein YP_003398848.1 1295708 R 591001 CDS YP_003398849.1 284048510 8737657 complement(1296677..1299853) 1 NC_013740.1 KEGG: bav:BAV0385 restriction-modification system, endonuclease subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; HsdR family type I site-specific deoxyribonuclease 1299853 8737657 Acfer_1173 Acidaminococcus fermentans DSM 20731 HsdR family type I site-specific deoxyribonuclease YP_003398849.1 1296677 R 591001 CDS YP_003398850.1 284048511 8737658 complement(1299902..1300408) 1 NC_013740.1 PFAM: restriction modification system DNA specificity domain; KEGG: chu:CHU_3351 type I site-specific deoxyribonuclease S subunit; restriction modification system DNA specificity domain-containing protein 1300408 8737658 Acfer_1174 Acidaminococcus fermentans DSM 20731 restriction modification system DNA specificity domain-containing protein YP_003398850.1 1299902 R 591001 CDS YP_003398851.1 284048512 8737659 complement(1300513..1301667) 1 NC_013740.1 PFAM: restriction modification system DNA specificity domain; KEGG: lrl:LC705_00838 type I restriction modification system DNA specificity domain, enzyme S protein (HsdS); restriction modification system DNA specificity domain-containing protein 1301667 8737659 Acfer_1175 Acidaminococcus fermentans DSM 20731 restriction modification system DNA specificity domain-containing protein YP_003398851.1 1300513 R 591001 CDS YP_003398852.1 284048513 8737660 complement(1301669..1304242) 1 NC_013740.1 TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: amu:Amuc_1915 type I restriction-modification system, M subunit; type I restriction-modification system, M subunit 1304242 8737660 Acfer_1176 Acidaminococcus fermentans DSM 20731 type I restriction-modification system, M subunit YP_003398852.1 1301669 R 591001 CDS YP_003398853.1 284048514 8737661 complement(1304679..1305140) 1 NC_013740.1 SMART: Transcription regulator, AsnC-type; KEGG: gfo:GFO_0486 transcription regulator AsnC; putative transcriptional regulator, AsnC family 1305140 8737661 Acfer_1177 Acidaminococcus fermentans DSM 20731 putative transcriptional regulator, AsnC family YP_003398853.1 1304679 R 591001 CDS YP_003398854.1 284048515 8737662 1305277..1306137 1 NC_013740.1 KEGG: tau:Tola_3060 hypothetical protein; hypothetical protein 1306137 8737662 Acfer_1178 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398854.1 1305277 D 591001 CDS YP_003398855.1 284048516 8737663 1306616..1307653 1 NC_013740.1 PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; KEGG: drm:Dred_2652 ABC transporter related; ABC transporter 1307653 8737663 Acfer_1179 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003398855.1 1306616 D 591001 CDS YP_003398856.1 284048517 8737664 1307643..1308305 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rru:Rru_A0789 binding-protein dependent transport system inner membrane protein; binding-protein-dependent transport system inner membrane protein 1308305 8737664 Acfer_1180 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003398856.1 1307643 D 591001 CDS YP_003398857.1 284048518 8737665 complement(1308390..1308740) 1 NC_013740.1 PFAM: protein of unknown function DUF192; KEGG: rba:RB13078 hypothetical protein; hypothetical protein 1308740 8737665 Acfer_1181 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398857.1 1308390 R 591001 CDS YP_003398858.1 284048519 8737666 complement(1308813..1309742) 1 NC_013740.1 PFAM: Type II secretion system F domain; KEGG: drm:Dred_2118 type II secretion system protein; type II secretion system F domain-containing protein 1309742 8737666 Acfer_1182 Acidaminococcus fermentans DSM 20731 type II secretion system F domain-containing protein YP_003398858.1 1308813 R 591001 CDS YP_003398859.1 284048520 8737667 complement(1309745..1311145) 1 NC_013740.1 PFAM: type II secretion system protein E; KEGG: tro:trd_1011 CpaF; type II secretion system protein E 1311145 8737667 Acfer_1183 Acidaminococcus fermentans DSM 20731 type II secretion system protein E YP_003398859.1 1309745 R 591001 CDS YP_003398860.1 284048521 8737668 complement(1311197..1311628) 1 NC_013740.1 PFAM: TadE family protein; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG; TadE family protein 1311628 8737668 Acfer_1184 Acidaminococcus fermentans DSM 20731 TadE family protein YP_003398860.1 1311197 R 591001 CDS YP_003398861.1 284048522 8737669 complement(1311763..1311984) 1 NC_013740.1 hypothetical protein 1311984 8737669 Acfer_1185 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398861.1 1311763 R 591001 CDS YP_003398862.1 284048523 8737670 complement(1312070..1313035) 1 NC_013740.1 PFAM: Type II secretion system F domain; KEGG: drm:Dred_2117 type II secretion system protein; type II secretion system F domain-containing protein 1313035 8737670 Acfer_1186 Acidaminococcus fermentans DSM 20731 type II secretion system F domain-containing protein YP_003398862.1 1312070 R 591001 CDS YP_003398863.1 284048524 8737671 complement(1313107..1314210) 1 NC_013740.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nth:Nther_2317 response regulator receiver protein; response regulator receiver protein 1314210 8737671 Acfer_1187 Acidaminococcus fermentans DSM 20731 response regulator receiver protein YP_003398863.1 1313107 R 591001 CDS YP_003398864.1 284048525 8737672 complement(1314224..1315042) 1 NC_013740.1 KEGG: nth:Nther_2317 response regulator receiver protein; response regulator receiver protein 1315042 8737672 Acfer_1188 Acidaminococcus fermentans DSM 20731 response regulator receiver protein YP_003398864.1 1314224 R 591001 CDS YP_003398865.1 284048526 8737673 complement(1315087..1316859) 1 NC_013740.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: bte:BTH_I2542 type II/III secretion system protein; type II and III secretion system protein 1316859 8737673 Acfer_1189 Acidaminococcus fermentans DSM 20731 type II and III secretion system protein YP_003398865.1 1315087 R 591001 CDS YP_003398866.1 284048527 8737674 complement(1316862..1317881) 1 NC_013740.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: nmu:Nmul_A2361 Flp pilus assembly CpaB; Flp pilus assembly protein CpaB 1317881 8737674 Acfer_1190 Acidaminococcus fermentans DSM 20731 Flp pilus assembly protein CpaB YP_003398866.1 1316862 R 591001 CDS YP_003398867.1 284048528 8737675 1318098..1319681 1 NC_013740.1 PFAM: amine oxidase; KEGG: bad:BAD_1455 hypothetical protein; amine oxidase 1319681 8737675 Acfer_1191 Acidaminococcus fermentans DSM 20731 amine oxidase YP_003398867.1 1318098 D 591001 CDS YP_003398868.1 284048529 8737676 1319671..1321356 1 NC_013740.1 KEGG: ele:Elen_0890 hypothetical protein; hypothetical protein 1321356 8737676 Acfer_1192 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398868.1 1319671 D 591001 CDS YP_003398869.1 284048530 8737677 complement(1321484..1322383) 1 NC_013740.1 KEGG: mta:Moth_1068 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1322383 8737677 Acfer_1193 Acidaminococcus fermentans DSM 20731 dihydrodipicolinate synthase YP_003398869.1 1321484 R 591001 CDS YP_003398870.1 284048531 8737678 complement(1322396..1323607) 1 NC_013740.1 KEGG: tex:Teth514_1634 aspartate kinase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; aspartate kinase 1323607 8737678 Acfer_1194 Acidaminococcus fermentans DSM 20731 aspartate kinase YP_003398870.1 1322396 R 591001 CDS YP_003398871.1 284048532 8737679 complement(1323649..1324680) 1 NC_013740.1 KEGG: pth:PTH_1286 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 1324680 8737679 Acfer_1195 Acidaminococcus fermentans DSM 20731 aspartate-semialdehyde dehydrogenase YP_003398871.1 1323649 R 591001 CDS YP_003398872.1 284048533 8737680 complement(1324789..1325562) 1 NC_013740.1 KEGG: dae:Dtox_3169 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase 1325562 8737680 Acfer_1196 Acidaminococcus fermentans DSM 20731 dihydrodipicolinate reductase YP_003398872.1 1324789 R 591001 CDS YP_003398873.1 284048534 8737681 complement(1325916..1326359) 1 NC_013740.1 hypothetical protein 1326359 8737681 Acfer_1197 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398873.1 1325916 R 591001 CDS YP_003398874.1 284048535 8737682 complement(1326369..1326821) 1 NC_013740.1 PFAM: deoxyUTP pyrophosphatase; KEGG: lla:L181168 deoxyuridine 5'-triphosphate nucleotidohydrolase; dUTP pyrophosphatase 1326821 8737682 Acfer_1198 Acidaminococcus fermentans DSM 20731 dUTP pyrophosphatase YP_003398874.1 1326369 R 591001 CDS YP_003398875.1 284048536 8737683 complement(1326802..1327293) 1 NC_013740.1 hypothetical protein 1327293 8737683 Acfer_1199 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398875.1 1326802 R 591001 CDS YP_003398876.1 284048537 8737684 complement(1327355..1327924) 1 NC_013740.1 PFAM: thiamine monophosphate synthase; KEGG: ere:EUBREC_0222 thiamine-phosphate pyrophosphorylase, putative; thiamine monophosphate synthase 1327924 8737684 Acfer_1200 Acidaminococcus fermentans DSM 20731 thiamine monophosphate synthase YP_003398876.1 1327355 R 591001 CDS YP_003398877.1 284048538 8737685 complement(1328100..1328474) 1 NC_013740.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: cpy:Cphy_1924 desulfoferrodoxin ferrous iron- binding region; desulfoferrodoxin ferrous iron-binding region 1328474 8737685 Acfer_1201 Acidaminococcus fermentans DSM 20731 desulfoferrodoxin ferrous iron-binding region YP_003398877.1 1328100 R 591001 CDS YP_003398878.1 284048539 8737686 1328649..1328930 1 NC_013740.1 hypothetical protein 1328930 8737686 Acfer_1202 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398878.1 1328649 D 591001 CDS YP_003398879.1 284048540 8737688 complement(1329712..1332120) 1 NC_013740.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; glutaredoxin; KEGG: shi:Shel_18290 anaerobic ribonucleoside- triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase 1332120 8737688 Acfer_1203 Acidaminococcus fermentans DSM 20731 anaerobic ribonucleoside-triphosphate reductase YP_003398879.1 1329712 R 591001 CDS YP_003398880.1 284048541 8737689 complement(1332240..1332950) 1 NC_013740.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: shi:Shel_18280 anaerobic ribonucleoside- triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1332950 8737689 Acfer_1204 Acidaminococcus fermentans DSM 20731 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003398880.1 1332240 R 591001 CDS YP_003398881.1 284048542 8737690 complement(1333148..1334389) 1 NC_013740.1 TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: fnu:FN0205 sodium/glutamate symport carrier protein; sodium/glutamate symporter 1334389 8737690 Acfer_1205 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003398881.1 1333148 R 591001 CDS YP_003398882.1 284048543 8737691 complement(1334699..1335559) 1 NC_013740.1 PFAM: peptidase M48 Ste24p; KEGG: app:CAP2UW1_0044 peptidase M48 Ste24p; peptidase M48 Ste24p 1335559 8737691 Acfer_1206 Acidaminococcus fermentans DSM 20731 peptidase M48 Ste24p YP_003398882.1 1334699 R 591001 CDS YP_003398883.1 284048544 8737692 complement(1335574..1336479) 1 NC_013740.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase; tyrosine recombinase XerD 1336479 8737692 Acfer_1207 Acidaminococcus fermentans DSM 20731 tyrosine recombinase XerD YP_003398883.1 1335574 R 591001 CDS YP_003398884.1 284048545 8737693 complement(1336454..1336723) 1 NC_013740.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: bsu:BSU17340 RNA-binding protein Hfq; RNA chaperone Hfq 1336723 8737693 Acfer_1208 Acidaminococcus fermentans DSM 20731 RNA chaperone Hfq YP_003398884.1 1336454 R 591001 CDS YP_003398885.1 284048546 8737694 complement(1336816..1337766) 1 NC_013740.1 KEGG: bbe:BBR47_33690 tRNA delta(2)- isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1337766 8737694 Acfer_1209 Acidaminococcus fermentans DSM 20731 tRNA delta(2)-isopentenylpyrophosphate transferase YP_003398885.1 1336816 R 591001 CDS YP_003398886.1 284048547 8737695 complement(1337763..1338557) 1 NC_013740.1 PFAM: protein of unknown function DUF548; KEGG: dau:Daud_0555 hypothetical protein; hypothetical protein 1338557 8737695 Acfer_1210 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398886.1 1337763 R 591001 CDS YP_003398887.1 284048548 8737696 complement(1338576..1340564) 1 NC_013740.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; KEGG: pjd:Pjdr2_2607 DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 1340564 8737696 Acfer_1211 Acidaminococcus fermentans DSM 20731 DNA mismatch repair protein MutL YP_003398887.1 1338576 R 591001 CDS YP_003398888.1 284048549 8737697 complement(1340564..1343173) 1 NC_013740.1 KEGG: dae:Dtox_2125 DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS 1343173 8737697 Acfer_1212 Acidaminococcus fermentans DSM 20731 DNA mismatch repair protein MutS YP_003398888.1 1340564 R 591001 CDS YP_003398889.1 284048550 8737698 complement(1343170..1344498) 1 NC_013740.1 KEGG: cth:Cthe_0783 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; MiaB family RNA modification protein 1344498 8737698 Acfer_1213 Acidaminococcus fermentans DSM 20731 MiaB family RNA modification protein YP_003398889.1 1343170 R 591001 CDS YP_003398890.1 284048551 8737699 complement(1344780..1347431) 1 NC_013740.1 PFAM: type III restriction protein res subunit; KEGG: bcb:BCB4264_A0973 type III restriction enzyme, res subunit family; type III restriction protein res subunit 1347431 8737699 Acfer_1214 Acidaminococcus fermentans DSM 20731 type III restriction protein res subunit YP_003398890.1 1344780 R 591001 CDS YP_003398891.1 284048552 8737700 complement(1347444..1349366) 1 NC_013740.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: ere:EUBREC_1322 putative type III modification methyltransferase; adenine-specific DNA-methyltransferase 1349366 8737700 Acfer_1215 Acidaminococcus fermentans DSM 20731 adenine-specific DNA-methyltransferase YP_003398891.1 1347444 R 591001 CDS YP_003398892.1 284048553 8737701 complement(1350085..1350648) 1 NC_013740.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: rxy:Rxyl_1667 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit 1350648 8737701 Acfer_1216 Acidaminococcus fermentans DSM 20731 ECF subfamily RNA polymerase sigma-24 subunit YP_003398892.1 1350085 R 591001 CDS YP_003398893.1 284048554 8737702 complement(1350664..1351518) 1 NC_013740.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: bha:BH3144 primosomal protein DnaI; IstB domain-containing protein ATP-binding protein 1351518 8737702 Acfer_1217 Acidaminococcus fermentans DSM 20731 IstB domain-containing protein ATP-binding protein YP_003398893.1 1350664 R 591001 CDS YP_003398894.1 284048555 8737703 1351532..1351759 1 NC_013740.1 hypothetical protein 1351759 8737703 Acfer_1218 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398894.1 1351532 D 591001 CDS YP_003398895.1 284048556 8737704 1351775..1352023 1 NC_013740.1 hypothetical protein 1352023 8737704 Acfer_1219 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398895.1 1351775 D 591001 CDS YP_003398896.1 284048557 8737705 1352026..1352175 1 NC_013740.1 KEGG: aoe:Clos_2527 hypothetical protein; hypothetical protein 1352175 8737705 Acfer_1220 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398896.1 1352026 D 591001 CDS YP_003398897.1 284048558 8737706 complement(1352272..1352610) 1 NC_013740.1 KEGG: mmr:Mmar10_2551 hypothetical protein; hypothetical protein 1352610 8737706 Acfer_1221 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398897.1 1352272 R 591001 CDS YP_003398898.1 284048559 8737707 complement(1352848..1354059) 1 NC_013740.1 PFAM: glycosyl transferase family 2; KEGG: bbe:BBR47_20870 hypothetical protein; family 2 glycosyl transferase 1354059 8737707 Acfer_1222 Acidaminococcus fermentans DSM 20731 family 2 glycosyl transferase YP_003398898.1 1352848 R 591001 CDS YP_003398899.1 284048560 8737708 complement(1354070..1354795) 1 NC_013740.1 KEGG: tpd:Teth39_0883 hypothetical protein; hypothetical protein 1354795 8737708 Acfer_1223 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398899.1 1354070 R 591001 CDS YP_003398900.1 284048561 8737709 complement(1354799..1355278) 1 NC_013740.1 KEGG: trq:TRQ2_0904 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1355278 8737709 Acfer_1224 Acidaminococcus fermentans DSM 20731 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_003398900.1 1354799 R 591001 CDS YP_003398901.1 284048562 8737710 complement(1355269..1356465) 1 NC_013740.1 KEGG: cbb:CLD_3744 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 1356465 8737710 Acfer_1225 Acidaminococcus fermentans DSM 20731 dihydropteroate synthase YP_003398901.1 1355269 R 591001 CDS YP_003398902.1 284048563 8737711 complement(1356467..1357234) 1 NC_013740.1 PFAM: protein of unknown function DUF198; KEGG: csc:Csac_0211 putative GTP cyclohydrolase; hypothetical protein 1357234 8737711 Acfer_1226 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398902.1 1356467 R 591001 CDS YP_003398903.1 284048564 8737712 complement(1357228..1357590) 1 NC_013740.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: cbi:CLJ_B0869 putative 6-pyruvoyl tetrahydropterin synthase; 6-pyruvoyl-tetrahydropterin synthase 1357590 8737712 Acfer_1227 Acidaminococcus fermentans DSM 20731 6-pyruvoyl-tetrahydropterin synthase YP_003398903.1 1357228 R 591001 CDS YP_003398904.1 284048565 8737713 complement(1357587..1358057) 1 NC_013740.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dae:Dtox_0805 RNA methyltransferase, TrmH family, group 2; tRNA/rRNA methyltransferase SpoU 1358057 8737713 Acfer_1228 Acidaminococcus fermentans DSM 20731 tRNA/rRNA methyltransferase SpoU YP_003398904.1 1357587 R 591001 CDS YP_003398905.1 284048566 8737714 complement(1358054..1359217) 1 NC_013740.1 KEGG: drm:Dred_1228 cell wall hydrolase/autolysin; hypothetical protein 1359217 8737714 Acfer_1229 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398905.1 1358054 R 591001 CDS YP_003398906.1 284048567 8737715 complement(1359236..1360669) 1 NC_013740.1 PFAM: Na+/solute symporter; KEGG: cbo:CBO0367 sodium:solute symporter family protein; Na+/solute symporter 1360669 8737715 Acfer_1230 Acidaminococcus fermentans DSM 20731 Na+/solute symporter YP_003398906.1 1359236 R 591001 CDS YP_003398907.1 284048568 8737716 complement(1360895..1361560) 1 NC_013740.1 KEGG: nth:Nther_2337 beta-lactamase domain protein; beta-lactamase 1361560 8737716 Acfer_1231 Acidaminococcus fermentans DSM 20731 beta-lactamase YP_003398907.1 1360895 R 591001 CDS YP_003398908.1 284048569 8737717 complement(1361574..1362500) 1 NC_013740.1 TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: hmo:HM1_1938 homoserine kinase; homoserine kinase 1362500 8737717 Acfer_1232 Acidaminococcus fermentans DSM 20731 homoserine kinase YP_003398908.1 1361574 R 591001 CDS YP_003398909.1 284048570 8737718 complement(1362517..1363824) 1 NC_013740.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; KEGG: hmo:HM1_1936 homoserine dehydrogenase; Homoserine dehydrogenase 1363824 8737718 Acfer_1233 Acidaminococcus fermentans DSM 20731 Homoserine dehydrogenase YP_003398909.1 1362517 R 591001 CDS YP_003398910.1 284048571 8737719 complement(1364014..1364466) 1 NC_013740.1 PFAM: amino acid-binding ACT domain protein; KEGG: tte:TTE2621 hypothetical protein; amino acid-binding ACT protein 1364466 8737719 Acfer_1234 Acidaminococcus fermentans DSM 20731 amino acid-binding ACT protein YP_003398910.1 1364014 R 591001 CDS YP_003398911.1 284048572 8737720 complement(1364540..1365532) 1 NC_013740.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: stp:Strop_1266 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1365532 8737720 Acfer_1235 Acidaminococcus fermentans DSM 20731 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_003398911.1 1364540 R 591001 CDS YP_003398912.1 284048573 8737721 complement(1365645..1366247) 1 NC_013740.1 PFAM: protein of unknown function DUF205; KEGG: hau:Haur_4413 hypothetical protein; hypothetical protein 1366247 8737721 Acfer_1236 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398912.1 1365645 R 591001 CDS YP_003398913.1 284048574 8737722 complement(1366263..1367594) 1 NC_013740.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: pjd:Pjdr2_2390 small GTP-binding protein; ribosome-associated GTPase EngA 1367594 8737722 Acfer_1237 Acidaminococcus fermentans DSM 20731 ribosome-associated GTPase EngA YP_003398913.1 1366263 R 591001 CDS YP_003398914.1 284048575 8737723 complement(1367610..1368662) 1 NC_013740.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2; KEGG: hmo:HM1_1981 isopentenyl-diphosphate delta- isomerase, type 2; isopentenyl-diphosphate delta-isomerase 1368662 8737723 Acfer_1238 Acidaminococcus fermentans DSM 20731 isopentenyl-diphosphate delta-isomerase YP_003398914.1 1367610 R 591001 CDS YP_003398915.1 284048576 8737724 complement(1368683..1370725) 1 NC_013740.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein; KEGG: dsy:DSY2255 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; hydroxymethylbutenyl pyrophosphate reductase 1370725 8737724 Acfer_1239 Acidaminococcus fermentans DSM 20731 hydroxymethylbutenyl pyrophosphate reductase YP_003398915.1 1368683 R 591001 CDS YP_003398916.1 284048577 8737725 complement(1370729..1371325) 1 NC_013740.1 KEGG: oih:OB1801 1-acyl-sn-glycerol-3-phosphate acetyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1371325 8737725 Acfer_1240 Acidaminococcus fermentans DSM 20731 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003398916.1 1370729 R 591001 CDS YP_003398917.1 284048578 8737726 complement(1371327..1371992) 1 NC_013740.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; shikimate kinase; KEGG: esi:Exig_1808 cytidylate kinase; cytidylate kinase 1371992 8737726 Acfer_1241 Acidaminococcus fermentans DSM 20731 cytidylate kinase YP_003398917.1 1371327 R 591001 CDS YP_003398918.1 284048579 8737727 complement(1371989..1373251) 1 NC_013740.1 PFAM: HI0933 family protein; KEGG: cth:Cthe_0708 FAD dependent oxidoreductase; hypothetical protein 1373251 8737727 Acfer_1242 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398918.1 1371989 R 591001 CDS YP_003398919.1 284048580 8737728 complement(1373248..1373982) 1 NC_013740.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: pjd:Pjdr2_2363 pseudouridine synthase; pseudouridine synthase 1373982 8737728 Acfer_1243 Acidaminococcus fermentans DSM 20731 pseudouridine synthase YP_003398919.1 1373248 R 591001 CDS YP_003398920.1 284048581 8737729 complement(1374004..1374552) 1 NC_013740.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: hmo:HM1_1886 segregation and condensation protein B; chromosome segregation and condensation protein ScpB 1374552 8737729 Acfer_1244 Acidaminococcus fermentans DSM 20731 chromosome segregation and condensation protein ScpB YP_003398920.1 1374004 R 591001 CDS YP_003398921.1 284048582 8737730 complement(1374530..1375258) 1 NC_013740.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: tye:THEYE_A0360 segregation and condensation protein A; chromosome segregation and condensation protein ScpA 1375258 8737730 Acfer_1245 Acidaminococcus fermentans DSM 20731 chromosome segregation and condensation protein ScpA YP_003398921.1 1374530 R 591001 CDS YP_003398922.1 284048583 8737731 complement(1375277..1375903) 1 NC_013740.1 PFAM: peptidase M50; KEGG: mta:Moth_1362 peptidase M50; peptidase M50 1375903 8737731 Acfer_1246 Acidaminococcus fermentans DSM 20731 peptidase M50 YP_003398922.1 1375277 R 591001 CDS YP_003398923.1 284048584 8737732 complement(1376100..1376876) 1 NC_013740.1 TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY; PFAM: GTP-sensing transcriptional pleiotropic repressor CodY; Helix-turn-helix CodY domain protein; KEGG: hor:Hore_07580 GTP-sensing transcriptional pleiotropic repressor CodY; GTP-sensing pleiotropic transcriptional repressor CodY 1376876 8737732 Acfer_1247 Acidaminococcus fermentans DSM 20731 GTP-sensing pleiotropic transcriptional repressor CodY YP_003398923.1 1376100 R 591001 CDS YP_003398924.1 284048585 8737733 complement(1376889..1377824) 1 NC_013740.1 TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: bbe:BBR47_34900 probable tyrosine recombinase; tyrosine recombinase XerC 1377824 8737733 Acfer_1248 Acidaminococcus fermentans DSM 20731 tyrosine recombinase XerC YP_003398924.1 1376889 R 591001 CDS YP_003398925.1 284048586 8737734 complement(1377887..1379203) 1 NC_013740.1 KEGG: pjd:Pjdr2_3464 gid protein; TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; hypothetical protein 1379203 8737734 Acfer_1249 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398925.1 1377887 R 591001 CDS YP_003398926.1 284048587 8737735 complement(1379395..1381470) 1 NC_013740.1 KEGG: drm:Dred_1984 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein; DNA topoisomerase I 1381470 8737735 Acfer_1250 Acidaminococcus fermentans DSM 20731 DNA topoisomerase I YP_003398926.1 1379395 R 591001 CDS YP_003398927.1 284048588 8737736 complement(1381483..1382595) 1 NC_013740.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: tro:trd_1601 probable smf protein; DNA protecting protein DprA 1382595 8737736 Acfer_1251 Acidaminococcus fermentans DSM 20731 DNA protecting protein DprA YP_003398927.1 1381483 R 591001 CDS YP_003398928.1 284048589 8737737 1382825..1384042 1 NC_013740.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: cth:Cthe_0042 small GTP-binding protein; small GTP-binding protein 1384042 8737737 Acfer_1252 Acidaminococcus fermentans DSM 20731 small GTP-binding protein YP_003398928.1 1382825 D 591001 CDS YP_003398929.1 284048590 8737738 complement(1384175..1385308) 1 NC_013740.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: fnu:FN0948 cobalt-zinc-cadmium resistance protein CzcD; cation diffusion facilitator family transporter 1385308 8737738 Acfer_1253 Acidaminococcus fermentans DSM 20731 cation diffusion facilitator family transporter YP_003398929.1 1384175 R 591001 CDS YP_003398930.1 284048591 8737739 complement(1385464..1385964) 1 NC_013740.1 hypothetical protein 1385964 8737739 Acfer_1254 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398930.1 1385464 R 591001 CDS YP_003398931.1 284048592 8737740 complement(1385966..1386394) 1 NC_013740.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: eel:EUBELI_20470 peptidylprolyl isomerase; FKBP-type peptidylprolyl isomerase 1386394 8737740 Acfer_1255 Acidaminococcus fermentans DSM 20731 FKBP-type peptidylprolyl isomerase YP_003398931.1 1385966 R 591001 CDS YP_003398932.1 284048593 8737741 complement(1386693..1387283) 1 NC_013740.1 hypothetical protein 1387283 8737741 Acfer_1256 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398932.1 1386693 R 591001 CDS YP_003398933.1 284048594 8737742 complement(1387359..1387958) 1 NC_013740.1 hypothetical protein 1387958 8737742 Acfer_1257 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398933.1 1387359 R 591001 CDS YP_003398934.1 284048595 8737743 complement(1388095..1388538) 1 NC_013740.1 hypothetical protein 1388538 8737743 Acfer_1258 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398934.1 1388095 R 591001 CDS YP_003398935.1 284048596 8737744 1388835..1389692 1 NC_013740.1 PFAM: tetracycline resistance leader peptide; KEGG: cbt:CLH_2455 hypothetical protein; tetracycline resistance leader peptide 1389692 8737744 Acfer_1259 Acidaminococcus fermentans DSM 20731 tetracycline resistance leader peptide YP_003398935.1 1388835 D 591001 CDS YP_003398936.1 284048597 8737745 complement(1390210..1393119) 1 NC_013740.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: dvl:Dvul_2939 SNF2-related protein; SNF2-related protein 1393119 8737745 Acfer_1260 Acidaminococcus fermentans DSM 20731 SNF2-related protein YP_003398936.1 1390210 R 591001 CDS YP_003398937.1 284048598 8737746 complement(1393123..1394526) 1 NC_013740.1 KEGG: dvl:Dvul_2938 hypothetical protein; hypothetical protein 1394526 8737746 Acfer_1261 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398937.1 1393123 R 591001 CDS YP_003398938.1 284048599 8737747 complement(1394519..1395226) 1 NC_013740.1 PFAM: OmpA/MotB domain protein; KEGG: dvl:Dvul_2937 OmpA/MotB domain-containing protein; OmpA/MotB domain-containing protein 1395226 8737747 Acfer_1262 Acidaminococcus fermentans DSM 20731 OmpA/MotB domain-containing protein YP_003398938.1 1394519 R 591001 CDS YP_003398939.1 284048600 8737748 complement(1395238..1397088) 1 NC_013740.1 KEGG: pap:PSPA7_6042 methyl-accepting chemotaxis protein; hypothetical protein 1397088 8737748 Acfer_1263 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398939.1 1395238 R 591001 CDS YP_003398940.1 284048601 8737749 complement(1397259..1397741) 1 NC_013740.1 PFAM: protein of unknown function DUF805; hypothetical protein 1397741 8737749 Acfer_1264 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398940.1 1397259 R 591001 CDS YP_003398941.1 284048602 8737750 complement(1397909..1398802) 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_1505 hypothetical protein; hypothetical protein 1398802 8737750 Acfer_1265 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398941.1 1397909 R 591001 CDS YP_003398942.1 284048603 8737751 complement(1398885..1399493) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: bhy:BHWA1_01194 hypothetical protein; hypothetical protein 1399493 8737751 Acfer_1266 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398942.1 1398885 R 591001 CDS YP_003398943.1 284048604 8737752 complement(1399544..1400902) 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpy:Cphy_3276 MATE efflux family protein; MATE efflux family protein 1400902 8737752 Acfer_1267 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003398943.1 1399544 R 591001 CDS YP_003398944.1 284048605 8737753 complement(1400917..1401978) 1 NC_013740.1 KEGG: eel:EUBELI_01335 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 1401978 8737753 Acfer_1268 Acidaminococcus fermentans DSM 20731 tryptophanyl-tRNA synthetase YP_003398944.1 1400917 R 591001 CDS YP_003398945.1 284048606 8737754 1402180..1403442 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: dhd:Dhaf_2655 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1403442 8737754 Acfer_1269 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003398945.1 1402180 D 591001 CDS YP_003398946.1 284048607 8737755 complement(1403493..1404500) 1 NC_013740.1 PFAM: Bile acid:sodium symporter; KEGG: bhy:BHWA1_00132 transporter; bile acid:sodium symporter 1404500 8737755 Acfer_1270 Acidaminococcus fermentans DSM 20731 bile acid:sodium symporter YP_003398946.1 1403493 R 591001 CDS YP_003398947.1 284048608 8737756 complement(1404901..1406295) 1 NC_013740.1 KEGG: ssa:SSA_0888 magnesium/cobalt transporter, putative; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular region; hypothetical protein; MgtE integral membrane region; SMART: hypothetical protein; magnesium transporter 1406295 8737756 Acfer_1271 Acidaminococcus fermentans DSM 20731 magnesium transporter YP_003398947.1 1404901 R 591001 CDS YP_003398948.1 284048609 8737757 complement(1406386..1406718) 1 NC_013740.1 hypothetical protein 1406718 8737757 Acfer_1272 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398948.1 1406386 R 591001 CDS YP_003398949.1 284048610 8737758 complement(1406743..1407972) 1 NC_013740.1 PFAM: methyltransferase small; SMART: PUA domain containing protein; KEGG: cth:Cthe_1519 SAM-dependent methyltransferase; methyltransferase small 1407972 8737758 Acfer_1273 Acidaminococcus fermentans DSM 20731 methyltransferase small YP_003398949.1 1406743 R 591001 CDS YP_003398950.1 284048611 8737759 complement(1408128..1408460) 1 NC_013740.1 hypothetical protein 1408460 8737759 Acfer_1274 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398950.1 1408128 R 591001 CDS YP_003398951.1 284048612 8737760 complement(1408650..1410161) 1 NC_013740.1 PFAM: IMP dehydrogenase/GMP reductase; hypothetical protein; KEGG: cdf:CD2335 inosine 5-monophosphate dehydrogenase; IMP dehydrogenase 1410161 8737760 Acfer_1275 Acidaminococcus fermentans DSM 20731 IMP dehydrogenase YP_003398951.1 1408650 R 591001 CDS YP_003398952.1 284048613 8737761 complement(1410309..1411592) 1 NC_013740.1 KEGG: gsu:GSU0610 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; Phosphoribosylglycinamide synthetase, N- domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine/glycine ligase 1411592 8737761 Acfer_1276 Acidaminococcus fermentans DSM 20731 phosphoribosylamine/glycine ligase YP_003398952.1 1410309 R 591001 CDS YP_003398953.1 284048614 8737762 complement(1411606..1412208) 1 NC_013740.1 PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region; KEGG: hmo:HM1_3106 bifunctional purine biosynthesis protein; IMP cyclohydrolase 1412208 8737762 Acfer_1277 Acidaminococcus fermentans DSM 20731 IMP cyclohydrolase YP_003398953.1 1411606 R 591001 CDS YP_003398954.1 284048615 8737763 complement(1412221..1412832) 1 NC_013740.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: drm:Dred_2363 phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1412832 8737763 Acfer_1278 Acidaminococcus fermentans DSM 20731 phosphoribosylglycinamide formyltransferase YP_003398954.1 1412221 R 591001 CDS YP_003398955.1 284048616 8737764 complement(1412825..1413880) 1 NC_013740.1 KEGG: dau:Daud_1631 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase 1413880 8737764 Acfer_1279 Acidaminococcus fermentans DSM 20731 phosphoribosylformylglycinamidine cyclo-ligase YP_003398955.1 1412825 R 591001 CDS YP_003398956.1 284048617 8737765 complement(1413893..1415335) 1 NC_013740.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: hmo:HM1_3109 amidophosphoribosyltransferase; amidophosphoribosyltransferase 1415335 8737765 Acfer_1280 Acidaminococcus fermentans DSM 20731 amidophosphoribosyltransferase YP_003398956.1 1413893 R 591001 CDS YP_003398957.1 284048618 8737766 complement(1415352..1415855) 1 NC_013740.1 KEGG: tsi:TSIB_1870 phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 1415855 8737766 Acfer_1281 Acidaminococcus fermentans DSM 20731 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_003398957.1 1415352 R 591001 CDS YP_003398958.1 284048619 8737767 1416235..1416708 1 NC_013740.1 KEGG: rca:Rcas_0223 FHA domain-containing protein; hypothetical protein 1416708 8737767 Acfer_1282 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398958.1 1416235 D 591001 CDS YP_003398959.1 284048620 8737768 complement(1416817..1419189) 1 NC_013740.1 KEGG: bcl:ABC2675 recombination and DNA strand exchange inhibitor protein; TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; MutS2 family protein 1419189 8737768 Acfer_1283 Acidaminococcus fermentans DSM 20731 MutS2 family protein YP_003398959.1 1416817 R 591001 CDS YP_003398960.1 284048621 8737769 complement(1419313..1421778) 1 NC_013740.1 PFAM: peptidase U32; KEGG: pth:PTH_1944 collagenase and related proteases; peptidase U32 1421778 8737769 Acfer_1284 Acidaminococcus fermentans DSM 20731 peptidase U32 YP_003398960.1 1419313 R 591001 CDS YP_003398961.1 284048622 8737770 1421997..1423673 1 NC_013740.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: lbu:LBUL_0889 C-di-GMP-specific phosphodiesterase; diguanylate phosphodiesterase 1423673 8737770 Acfer_1285 Acidaminococcus fermentans DSM 20731 diguanylate phosphodiesterase YP_003398961.1 1421997 D 591001 CDS YP_003398962.1 284048623 8737771 complement(1423830..1424693) 1 NC_013740.1 hypothetical protein 1424693 8737771 Acfer_1286 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398962.1 1423830 R 591001 CDS YP_003398963.1 284048624 8737772 complement(1424912..1425328) 1 NC_013740.1 PFAM: protein of unknown function UPF0150; KEGG: dsy:DSY3841 hypothetical protein; hypothetical protein 1425328 8737772 Acfer_1287 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398963.1 1424912 R 591001 CDS YP_003398964.1 284048625 8737773 complement(1425344..1425532) 1 NC_013740.1 PFAM: YcfA family protein; KEGG: rxy:Rxyl_0587 YcfA-like protein; hypothetical protein 1425532 8737773 Acfer_1288 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398964.1 1425344 R 591001 CDS YP_003398965.1 284048626 8737774 complement(1425974..1426837) 1 NC_013740.1 hypothetical protein 1426837 8737774 Acfer_1289 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398965.1 1425974 R 591001 CDS YP_003398966.1 284048627 8737775 complement(1426827..1427330) 1 NC_013740.1 hypothetical protein 1427330 8737775 Acfer_1290 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398966.1 1426827 R 591001 CDS YP_003398967.1 284048628 8737776 complement(1427317..1427637) 1 NC_013740.1 hypothetical protein 1427637 8737776 Acfer_1291 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398967.1 1427317 R 591001 CDS YP_003398968.1 284048629 8737777 complement(1427624..1428091) 1 NC_013740.1 hypothetical protein 1428091 8737777 Acfer_1292 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398968.1 1427624 R 591001 CDS YP_003398969.1 284048630 8737778 complement(1428088..1428480) 1 NC_013740.1 KEGG: tpd:Teth39_1070 Tfp pilus assembly protein PilE-like protein; Tfp pilus assembly protein PilE-like protein 1428480 8737778 Acfer_1293 Acidaminococcus fermentans DSM 20731 Tfp pilus assembly protein PilE-like protein YP_003398969.1 1428088 R 591001 CDS YP_003398970.1 284048631 8737779 complement(1428530..1429711) 1 NC_013740.1 PFAM: Type II secretion system F domain; KEGG: dar:Daro_0638 type II secretion system protein; type II secretion system F domain-containing protein 1429711 8737779 Acfer_1294 Acidaminococcus fermentans DSM 20731 type II secretion system F domain-containing protein YP_003398970.1 1428530 R 591001 CDS YP_003398971.1 284048632 8737780 complement(1429778..1430236) 1 NC_013740.1 PFAM: ATP-cone domain protein; KEGG: lcb:LCABL_19250 transcriptional regulator NrdR; ATP-cone domain-containing protein 1430236 8737780 Acfer_1295 Acidaminococcus fermentans DSM 20731 ATP-cone domain-containing protein YP_003398971.1 1429778 R 591001 CDS YP_003398972.1 284048633 8737781 complement(1430256..1431374) 1 NC_013740.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: dhd:Dhaf_4057 cell division protein FtsZ; cell division protein FtsZ 1431374 8737781 Acfer_1296 Acidaminococcus fermentans DSM 20731 cell division protein FtsZ YP_003398972.1 1430256 R 591001 CDS YP_003398973.1 284048634 8737782 complement(1431589..1431915) 1 NC_013740.1 PFAM: protein of unknown function DUF1290; KEGG: pth:PTH_1852 hypothetical protein; hypothetical protein 1431915 8737782 Acfer_1297 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398973.1 1431589 R 591001 CDS YP_003398974.1 284048635 8737783 complement(1431912..1432604) 1 NC_013740.1 PFAM: protein of unknown function DUF881; KEGG: tpd:Teth39_1999 hypothetical protein; hypothetical protein 1432604 8737783 Acfer_1298 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398974.1 1431912 R 591001 CDS YP_003398975.1 284048636 8737784 complement(1432617..1433831) 1 NC_013740.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: pth:PTH_1855 cell division septal protein; polypeptide-transport-associated domain-containing protein 1433831 8737784 Acfer_1299 Acidaminococcus fermentans DSM 20731 polypeptide-transport-associated domain-containing protein YP_003398975.1 1432617 R 591001 CDS YP_003398976.1 284048637 8737785 complement(1433833..1434765) 1 NC_013740.1 KEGG: esi:Exig_1814 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 1434765 8737785 Acfer_1300 Acidaminococcus fermentans DSM 20731 D-alanine--D-alanine ligase YP_003398976.1 1433833 R 591001 CDS YP_003398977.1 284048638 8737786 complement(1434768..1436153) 1 NC_013740.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: pth:PTH_1860 UDP-N-acetylmuramate--L-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 1436153 8737786 Acfer_1301 Acidaminococcus fermentans DSM 20731 UDP-N-acetylmuramate--L-alanine ligase YP_003398977.1 1434768 R 591001 CDS YP_003398978.1 284048639 8737787 complement(1436167..1437276) 1 NC_013740.1 KEGG: drm:Dred_0675 undecaprenyldiphospho- muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: glycosyltransferase 28 domain; glycosyl transferase family 28; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 1437276 8737787 Acfer_1302 Acidaminococcus fermentans DSM 20731 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_003398978.1 1436167 R 591001 CDS YP_003398979.1 284048640 8737788 complement(1437273..1438694) 1 NC_013740.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: tex:Teth514_2011 UDP-N-acetylmuramoylalanine-- D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1438694 8737788 Acfer_1303 Acidaminococcus fermentans DSM 20731 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_003398979.1 1437273 R 591001 CDS YP_003398980.1 284048641 8737789 complement(1438909..1439871) 1 NC_013740.1 TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; PFAM: glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; KEGG: gka:GK1117 phospho-N-acetylmuramoyl- pentapeptide-transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 1439871 8737789 Acfer_1304 Acidaminococcus fermentans DSM 20731 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003398980.1 1438909 R 591001 CDS YP_003398981.1 284048642 8737790 complement(1439865..1441247) 1 NC_013740.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-di aminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: chy:CHY_2073 UDP-N-acetylmuramoyl-tripeptide-- D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase 1441247 8737790 Acfer_1305 Acidaminococcus fermentans DSM 20731 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/ D-alanyl-D-alanyl ligase YP_003398981.1 1439865 R 591001 CDS YP_003398982.1 284048643 8737791 complement(1441240..1442733) 1 NC_013740.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: mta:Moth_0838 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase; UDP-N-acetylmuramyl tripeptide synthetase 1442733 8737791 Acfer_1306 Acidaminococcus fermentans DSM 20731 UDP-N-acetylmuramyl tripeptide synthetase YP_003398982.1 1441240 R 591001 CDS YP_003398983.1 284048644 8737792 complement(1442856..1443266) 1 NC_013740.1 PFAM: Septum formation initiator; KEGG: tex:Teth514_2016 cell division protein FtsL; septum formation initiator 1443266 8737792 Acfer_1307 Acidaminococcus fermentans DSM 20731 septum formation initiator YP_003398983.1 1442856 R 591001 CDS YP_003398984.1 284048645 8737793 complement(1443309..1444238) 1 NC_013740.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: drm:Dred_0667 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 1444238 8737793 Acfer_1308 Acidaminococcus fermentans DSM 20731 S-adenosyl-methyltransferase MraW YP_003398984.1 1443309 R 591001 CDS YP_003398985.1 284048646 8737794 complement(1444343..1444768) 1 NC_013740.1 TIGRFAM: MraZ protein; PFAM: MraZ domain; KEGG: hmo:HM1_2050 cell division mraz protein; MraZ protein 1444768 8737794 Acfer_1309 Acidaminococcus fermentans DSM 20731 MraZ protein YP_003398985.1 1444343 R 591001 CDS YP_003398986.1 284048647 8737795 1445098..1445328 1 NC_013740.1 PFAM: Domain of unknown function DUF1858; KEGG: mta:Moth_2496 hypothetical protein; hypothetical protein 1445328 8737795 Acfer_1310 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398986.1 1445098 D 591001 CDS YP_003398987.1 284048648 8737796 complement(1445465..1446037) 1 NC_013740.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: drm:Dred_1689 orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1446037 8737796 Acfer_1311 Acidaminococcus fermentans DSM 20731 orotate phosphoribosyltransferase YP_003398987.1 1445465 R 591001 CDS YP_003398988.1 284048649 8737797 complement(1446040..1446759) 1 NC_013740.1 KEGG: drm:Dred_1687 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 1446759 8737797 Acfer_1312 Acidaminococcus fermentans DSM 20731 orotidine 5'-phosphate decarboxylase YP_003398988.1 1446040 R 591001 CDS YP_003398989.1 284048650 8737798 complement(1446773..1447711) 1 NC_013740.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase; KEGG: hmo:HM1_2112 dihydroorotate dehydrogenase, catalytic subunit; dihydroorotate dehydrogenase family protein 1447711 8737798 Acfer_1313 Acidaminococcus fermentans DSM 20731 dihydroorotate dehydrogenase family protein YP_003398989.1 1446773 R 591001 CDS YP_003398990.1 284048651 8737799 complement(1447705..1448472) 1 NC_013740.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: cth:Cthe_0948 dihydroorotate oxidase B, electron transfer subunit; dihydroorotate dehydrogenase electron transfer subunit 1448472 8737799 Acfer_1314 Acidaminococcus fermentans DSM 20731 dihydroorotate dehydrogenase electron transfer subunit YP_003398990.1 1447705 R 591001 CDS YP_003398991.1 284048652 8737800 complement(1448476..1451682) 1 NC_013740.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; KEGG: hmo:HM1_2110 carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 1451682 8737800 Acfer_1315 Acidaminococcus fermentans DSM 20731 carbamoyl-phosphate synthase large subunit YP_003398991.1 1448476 R 591001 CDS YP_003398992.1 284048653 8737801 complement(1451684..1452760) 1 NC_013740.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; KEGG: amt:Amet_4211 carbamoyl phosphate synthase small subunit; carbamoyl-phosphate synthase small subunit 1452760 8737801 Acfer_1316 Acidaminococcus fermentans DSM 20731 carbamoyl-phosphate synthase small subunit YP_003398992.1 1451684 R 591001 CDS YP_003398993.1 284048654 8737802 complement(1452748..1454040) 1 NC_013740.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: dae:Dtox_2354 dihydroorotase, multifunctional complex type; dihydroorotase, multifunctional complex type 1454040 8737802 Acfer_1317 Acidaminococcus fermentans DSM 20731 dihydroorotase, multifunctional complex type YP_003398993.1 1452748 R 591001 CDS YP_003398994.1 284048655 8737803 complement(1454024..1454980) 1 NC_013740.1 KEGG: drm:Dred_1681 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 1454980 8737803 Acfer_1318 Acidaminococcus fermentans DSM 20731 aspartate carbamoyltransferase YP_003398994.1 1454024 R 591001 CDS YP_003398995.1 284048656 8737804 1455365..1455637 1 NC_013740.1 KEGG: wol:WD0296 hypothetical protein; hypothetical protein 1455637 8737804 Acfer_1319 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398995.1 1455365 D 591001 CDS YP_003398996.1 284048657 8737805 1455970..1459155 1 NC_013740.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: pjd:Pjdr2_0293 type III restriction protein res subunit; type III restriction protein res subunit 1459155 8737805 Acfer_1320 Acidaminococcus fermentans DSM 20731 type III restriction protein res subunit YP_003398996.1 1455970 D 591001 CDS YP_003398997.1 284048658 8737806 complement(1459388..1460692) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: sth:STH1690 putative amino acid amidohydrolase; amidohydrolase 1460692 8737806 Acfer_1321 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003398997.1 1459388 R 591001 CDS YP_003398998.1 284048659 8737807 complement(1460813..1462384) 1 NC_013740.1 KEGG: mta:Moth_2335 hypothetical protein; hypothetical protein 1462384 8737807 Acfer_1322 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398998.1 1460813 R 591001 CDS YP_003398999.1 284048660 8737808 complement(1462412..1463533) 1 NC_013740.1 hypothetical protein 1463533 8737808 Acfer_1323 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003398999.1 1462412 R 591001 CDS YP_003399000.1 284048661 8737809 complement(1463655..1464176) 1 NC_013740.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ere:EUBREC_2155 hypothetical protein; metal dependent phosphohydrolase 1464176 8737809 Acfer_1324 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003399000.1 1463655 R 591001 CDS YP_003399001.1 284048662 8737810 complement(1464321..1465376) 1 NC_013740.1 PFAM: OmpA/MotB domain protein; porin opacity type; KEGG: vpa:VP0764 outer membrane protein OmpA; OmpA/MotB domain-containing protein 1465376 8737810 Acfer_1325 Acidaminococcus fermentans DSM 20731 OmpA/MotB domain-containing protein YP_003399001.1 1464321 R 591001 CDS YP_003399002.1 284048663 8737811 complement(1465584..1466750) 1 NC_013740.1 hypothetical protein 1466750 8737811 Acfer_1326 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399002.1 1465584 R 591001 CDS YP_003399003.1 284048664 8737812 complement(1466759..1468147) 1 NC_013740.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cth:Cthe_0372 sulfide dehydrogenase (flavoprotein) subunit SudA; glutamate synthase (NADPH), homotetrameric 1468147 8737812 Acfer_1327 Acidaminococcus fermentans DSM 20731 glutamate synthase (NADPH), homotetrameric YP_003399003.1 1466759 R 591001 CDS YP_003399004.1 284048665 8737813 complement(1468144..1468986) 1 NC_013740.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: pab:PAB1737 ferredoxin-NADP(+) reductase subunit alpha; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1468986 8737813 Acfer_1328 Acidaminococcus fermentans DSM 20731 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_003399004.1 1468144 R 591001 CDS YP_003399005.1 284048666 8737814 complement(1469238..1470521) 1 NC_013740.1 PFAM: amidohydrolase; KEGG: chy:CHY_1438 amidohydrolase family protein; amidohydrolase 1470521 8737814 Acfer_1329 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399005.1 1469238 R 591001 CDS YP_003399006.1 284048667 8737815 complement(1470531..1471358) 1 NC_013740.1 PFAM: purine or other phosphorylase family 1; KEGG: sth:STH1696 5'-methylthioadenosine phosphorylase; purine or other phosphorylase family 1 1471358 8737815 Acfer_1330 Acidaminococcus fermentans DSM 20731 purine or other phosphorylase family 1 YP_003399006.1 1470531 R 591001 CDS YP_003399007.1 284048668 8737816 complement(1471364..1472035) 1 NC_013740.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: esi:Exig_2410 HAD family hydrolase; HAD-superfamily hydrolase 1472035 8737816 Acfer_1331 Acidaminococcus fermentans DSM 20731 HAD-superfamily hydrolase YP_003399007.1 1471364 R 591001 CDS YP_003399008.1 284048669 8737817 complement(1472143..1475493) 1 NC_013740.1 PFAM: UvrD/REP helicase; KEGG: ank:AnaeK_1341 UvrD/REP helicase; exodeoxyribonuclease V 1475493 8737817 Acfer_1332 Acidaminococcus fermentans DSM 20731 exodeoxyribonuclease V YP_003399008.1 1472143 R 591001 CDS YP_003399009.1 284048670 8737818 complement(1475498..1478509) 1 NC_013740.1 KEGG: ctc:CTC00686 ATP-dependent nuclease subunit B; ATP-dependent nuclease subunit B-like protein 1478509 8737818 Acfer_1333 Acidaminococcus fermentans DSM 20731 ATP-dependent nuclease subunit B-like protein YP_003399009.1 1475498 R 591001 CDS YP_003399010.1 284048671 8737819 complement(1478646..1479692) 1 NC_013740.1 hypothetical protein 1479692 8737819 Acfer_1334 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399010.1 1478646 R 591001 CDS YP_003399011.1 284048672 8737820 complement(1479771..1481144) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: sth:STH127 sodium-dependent transporter; citrate transporter 1481144 8737820 Acfer_1335 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003399011.1 1479771 R 591001 CDS YP_003399012.1 284048673 8737821 1481227..1482402 1 NC_013740.1 PFAM: PP-loop domain protein; SMART: Rhodanese domain protein; KEGG: ere:EUBREC_1362 putative ATPase of the PP- loop superfamily implicated in cell cycle control; PP-loop domain-containing protein 1482402 8737821 Acfer_1336 Acidaminococcus fermentans DSM 20731 PP-loop domain-containing protein YP_003399012.1 1481227 D 591001 CDS YP_003399013.1 284048674 8737823 1482945..1483745 1 NC_013740.1 KEGG: dsy:DSY0293 hypothetical protein; hypothetical protein 1483745 8737823 Acfer_1338 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399013.1 1482945 D 591001 CDS YP_003399014.1 284048675 8737824 1483867..1484484 1 NC_013740.1 hypothetical protein 1484484 8737824 Acfer_1339 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399014.1 1483867 D 591001 CDS YP_003399015.1 284048676 8737825 1484504..1485181 1 NC_013740.1 TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; KEGG: dhd:Dhaf_1036 sugar fermentation stimulation protein; sugar fermentation stimulation protein 1485181 8737825 Acfer_1340 Acidaminococcus fermentans DSM 20731 sugar fermentation stimulation protein YP_003399015.1 1484504 D 591001 CDS YP_003399016.1 284048677 8737826 complement(1485384..1487075) 1 NC_013740.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: cac:CAC0273 2-isopropylmalate synthase; 2-isopropylmalate synthase 1487075 8737826 Acfer_1341 Acidaminococcus fermentans DSM 20731 2-isopropylmalate synthase YP_003399016.1 1485384 R 591001 CDS YP_003399017.1 284048678 8737827 complement(1487523..1488698) 1 NC_013740.1 KEGG: bfr:BF2666 5-aminoimidazole-4-carboxamide ribonucleotide transformylase; PFAM: AICARFT/IMPCHase bienzyme formylation region; SMART: AICARFT/IMPCHase bienzyme formylation region; IMP cyclohydrolase 1488698 8737827 Acfer_1342 Acidaminococcus fermentans DSM 20731 IMP cyclohydrolase YP_003399017.1 1487523 R 591001 CDS YP_003399018.1 284048679 8737828 complement(1488863..1489777) 1 NC_013740.1 PFAM: Radical SAM domain protein; KEGG: cce:Ccel_0110 radical SAM domain protein; radical SAM protein 1489777 8737828 Acfer_1343 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399018.1 1488863 R 591001 CDS YP_003399019.1 284048680 8737829 complement(1489831..1490460) 1 NC_013740.1 KEGG: rsa:RSal33209_1872 hypothetical protein; hypothetical protein 1490460 8737829 Acfer_1344 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399019.1 1489831 R 591001 CDS YP_003399020.1 284048681 8737830 complement(1490554..1491435) 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aoe:Clos_0855 hypothetical protein; hypothetical protein 1491435 8737830 Acfer_1345 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399020.1 1490554 R 591001 CDS YP_003399021.1 284048682 8737831 complement(1491520..1492140) 1 NC_013740.1 KEGG: stm:STM3354 L(+)-tartrate dehydratase subunit beta; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 1492140 8737831 Acfer_1346 Acidaminococcus fermentans DSM 20731 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta YP_003399021.1 1491520 R 591001 CDS YP_003399022.1 284048683 8737832 complement(1492140..1493039) 1 NC_013740.1 KEGG: set:SEN3188 tartrate dehydratase subunit alpha; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1493039 8737832 Acfer_1347 Acidaminococcus fermentans DSM 20731 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_003399022.1 1492140 R 591001 CDS YP_003399023.1 284048684 8737833 complement(1493100..1494368) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: kpu:KP1_4956 putative cation transporter; citrate transporter 1494368 8737833 Acfer_1348 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003399023.1 1493100 R 591001 CDS YP_003399024.1 284048685 8737834 complement(1494723..1495715) 1 NC_013740.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: set:SEN3190 LysR-family transcriptional regulator; GntR family transcriptional regulator 1495715 8737834 Acfer_1349 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003399024.1 1494723 R 591001 CDS YP_003399025.1 284048686 8737835 complement(1495736..1497541) 1 NC_013740.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; KEGG: chy:CHY_0410 GTP-binding protein LepA; GTP-binding protein LepA 1497541 8737835 Acfer_1350 Acidaminococcus fermentans DSM 20731 GTP-binding protein LepA YP_003399025.1 1495736 R 591001 CDS YP_003399026.1 284048687 8737836 complement(1497842..1498105) 1 NC_013740.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: bld:BLi02747 30S ribosomal protein S20; 30S ribosomal protein S20 1498105 8737836 Acfer_1351 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S20 YP_003399026.1 1497842 R 591001 CDS YP_003399027.1 284048688 8737837 complement(1498180..1499121) 1 NC_013740.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; KEGG: ami:Amir_5827 riboflavin biosynthesis protein RibF; riboflavin biosynthesis protein RibF 1499121 8737837 Acfer_1352 Acidaminococcus fermentans DSM 20731 riboflavin biosynthesis protein RibF YP_003399027.1 1498180 R 591001 CDS YP_003399028.1 284048689 8737838 complement(1499118..1500011) 1 NC_013740.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: cth:Cthe_0988 tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 1500011 8737838 Acfer_1353 Acidaminococcus fermentans DSM 20731 tRNA pseudouridine synthase B YP_003399028.1 1499118 R 591001 CDS YP_003399029.1 284048690 8737839 complement(1500011..1500967) 1 NC_013740.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: sth:STH1524 exopolyphosphatase-related protein; phosphoesterase RecJ domain-containing protein 1500967 8737839 Acfer_1354 Acidaminococcus fermentans DSM 20731 phosphoesterase RecJ domain-containing protein YP_003399029.1 1500011 R 591001 CDS YP_003399030.1 284048691 8737840 complement(1500960..1501316) 1 NC_013740.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: tex:Teth514_1644 ribosome-binding factor A; ribosome-binding factor A 1501316 8737840 Acfer_1355 Acidaminococcus fermentans DSM 20731 ribosome-binding factor A YP_003399030.1 1500960 R 591001 CDS YP_003399031.1 284048692 8737841 complement(1501326..1503914) 1 NC_013740.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain protein; elongation factor Tu domain 2 protein; KEGG: aac:Aaci_1435 translation initiation factor IF-2; translation initiation factor IF-2 1503914 8737841 Acfer_1356 Acidaminococcus fermentans DSM 20731 translation initiation factor IF-2 YP_003399031.1 1501326 R 591001 CDS YP_003399032.1 284048693 8737842 complement(1503931..1504230) 1 NC_013740.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: pjd:Pjdr2_3408 ribosomal protein L7Ae/L30e/S12e/Gadd45; ribosomal protein L7Ae/L30e/S12e/Gadd45 1504230 8737842 Acfer_1357 Acidaminococcus fermentans DSM 20731 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_003399032.1 1503931 R 591001 CDS YP_003399033.1 284048694 8737843 complement(1504214..1504489) 1 NC_013740.1 PFAM: protein of unknown function DUF448; KEGG: hmo:HM1_2311 hypothetical protein; hypothetical protein 1504489 8737843 Acfer_1358 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399033.1 1504214 R 591001 CDS YP_003399034.1 284048695 8737844 complement(1504486..1505574) 1 NC_013740.1 KEGG: hmo:HM1_2310 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain protein; RNA binding S1 domain protein; K Homology, type 1, subgroup; SMART: KH domain protein; transcription termination factor NusA 1505574 8737844 Acfer_1359 Acidaminococcus fermentans DSM 20731 transcription termination factor NusA YP_003399034.1 1504486 R 591001 CDS YP_003399035.1 284048696 8737845 complement(1505605..1506066) 1 NC_013740.1 PFAM: protein of unknown function DUF150; KEGG: eat:EAT1b_2952 protein of unknown function DUF150; hypothetical protein 1506066 8737845 Acfer_1360 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399035.1 1505605 R 591001 CDS YP_003399036.1 284048697 8737846 1506288..1508342 1 NC_013740.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: dau:Daud_1369 1A family penicillin-binding protein; penicillin-binding protein 1508342 8737846 Acfer_1361 Acidaminococcus fermentans DSM 20731 penicillin-binding protein YP_003399036.1 1506288 D 591001 CDS YP_003399037.1 284048698 8737847 complement(1508640..1510016) 1 NC_013740.1 PFAM: pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: tex:Teth514_1582 oxaloacetate decarboxylase; pyruvate carboxyltransferase 1510016 8737847 Acfer_1362 Acidaminococcus fermentans DSM 20731 pyruvate carboxyltransferase YP_003399037.1 1508640 R 591001 CDS YP_003399038.1 284048699 8737848 complement(1510136..1511311) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: eel:EUBELI_20467 hypothetical protein; amidohydrolase 1511311 8737848 Acfer_1363 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399038.1 1510136 R 591001 CDS YP_003399039.1 284048700 8737849 complement(1511314..1511871) 1 NC_013740.1 KEGG: dge:Dgeo_2274 hypothetical protein; hypothetical protein 1511871 8737849 Acfer_1364 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399039.1 1511314 R 591001 CDS YP_003399040.1 284048701 8737850 complement(1511908..1512861) 1 NC_013740.1 PFAM: homocysteine S-methyltransferase; KEGG: bld:BLi00266 homocysteine methyltransferase; Homocysteine S-methyltransferase 1512861 8737850 Acfer_1365 Acidaminococcus fermentans DSM 20731 Homocysteine S-methyltransferase YP_003399040.1 1511908 R 591001 CDS YP_003399041.1 284048702 8737851 1513087..1513491 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 1513491 8737851 Acfer_1366 Acidaminococcus fermentans DSM 20731 putative transposase YP_003399041.1 1513087 D 591001 CDS YP_003399042.1 284048703 8737852 1513503..1514501 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 1514501 8737852 Acfer_1367 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003399042.1 1513503 D 591001 CDS YP_003399043.1 284048704 8737853 complement(1514707..1516149) 1 NC_013740.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: tex:Teth514_0910 amino acid carrier protein; amino acid carrier protein 1516149 8737853 Acfer_1368 Acidaminococcus fermentans DSM 20731 amino acid carrier protein YP_003399043.1 1514707 R 591001 CDS YP_003399044.1 284048705 8737854 complement(1516208..1517476) 1 NC_013740.1 KEGG: gau:GAU_3178 putative N-carbamoyl-L-amino acid amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 1517476 8737854 Acfer_1369 Acidaminococcus fermentans DSM 20731 amidase YP_003399044.1 1516208 R 591001 CDS YP_003399045.1 284048706 8737855 complement(1517509..1521084) 1 NC_013740.1 KEGG: mta:Moth_1045 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase III subunit alpha 1521084 8737855 Acfer_1370 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunit alpha YP_003399045.1 1517509 R 591001 CDS YP_003399046.1 284048707 8737856 complement(1521106..1521783) 1 NC_013740.1 PFAM: MgtC/SapB transporter; KEGG: hor:Hore_07790 MgtC/SapB transporter; MgtC/SapB transporter 1521783 8737856 Acfer_1371 Acidaminococcus fermentans DSM 20731 MgtC/SapB transporter YP_003399046.1 1521106 R 591001 CDS YP_003399047.1 284048708 8737857 complement(1521973..1523688) 1 NC_013740.1 KEGG: drm:Dred_1967 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein; prolyl-tRNA synthetase 1523688 8737857 Acfer_1372 Acidaminococcus fermentans DSM 20731 prolyl-tRNA synthetase YP_003399047.1 1521973 R 591001 CDS YP_003399048.1 284048709 8737858 complement(1523691..1524758) 1 NC_013740.1 KEGG: gme:Gmet_1353 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1524758 8737858 Acfer_1373 Acidaminococcus fermentans DSM 20731 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_003399048.1 1523691 R 591001 CDS YP_003399049.1 284048710 8737859 complement(1524768..1525784) 1 NC_013740.1 KEGG: mta:Moth_1042 peptidase RseP; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1525784 8737859 Acfer_1374 Acidaminococcus fermentans DSM 20731 membrane-associated zinc metalloprotease YP_003399049.1 1524768 R 591001 CDS YP_003399050.1 284048711 8737860 complement(1525797..1526951) 1 NC_013740.1 KEGG: pcu:pc0260 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1526951 8737860 Acfer_1375 Acidaminococcus fermentans DSM 20731 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_003399050.1 1525797 R 591001 CDS YP_003399051.1 284048712 8737861 complement(1526963..1527793) 1 NC_013740.1 PFAM: phosphatidate cytidylyltransferase; KEGG: amt:Amet_2683 phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 1527793 8737861 Acfer_1376 Acidaminococcus fermentans DSM 20731 phosphatidate cytidylyltransferase YP_003399051.1 1526963 R 591001 CDS YP_003399052.1 284048713 8737862 complement(1527806..1528597) 1 NC_013740.1 KEGG: dau:Daud_0610 undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase 1528597 8737862 Acfer_1377 Acidaminococcus fermentans DSM 20731 undecaprenyl diphosphate synthase YP_003399052.1 1527806 R 591001 CDS YP_003399053.1 284048714 8737863 complement(1528664..1528837) 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tpd:Teth39_1414 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1528837 8737863 Acfer_1378 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003399053.1 1528664 R 591001 CDS YP_003399054.1 284048715 8737864 complement(1529070..1529633) 1 NC_013740.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: dae:Dtox_3210 ribosome recycling factor; ribosome recycling factor 1529633 8737864 Acfer_1379 Acidaminococcus fermentans DSM 20731 ribosome recycling factor YP_003399054.1 1529070 R 591001 CDS YP_003399055.1 284048716 8737865 complement(1529634..1530359) 1 NC_013740.1 KEGG: chy:CHY_1785 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase 1530359 8737865 Acfer_1380 Acidaminococcus fermentans DSM 20731 uridylate kinase YP_003399055.1 1529634 R 591001 CDS YP_003399056.1 284048717 8737866 complement(1530561..1531442) 1 NC_013740.1 TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: oih:OB1587 elongation factor Ts; translation elongation factor Ts 1531442 8737866 Acfer_1381 Acidaminococcus fermentans DSM 20731 translation elongation factor Ts YP_003399056.1 1530561 R 591001 CDS YP_003399057.1 284048718 8737867 complement(1531485..1532234) 1 NC_013740.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: drm:Dred_1978 ribosomal protein S2; 30S ribosomal protein S2 1532234 8737867 Acfer_1382 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S2 YP_003399057.1 1531485 R 591001 CDS YP_003399058.1 284048719 8737868 complement(1532491..1533684) 1 NC_013740.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; KEGG: chl:Chy400_3264 threonyl/alanyl tRNA synthetase SAD; threonyl/alanyl tRNA synthetase SAD 1533684 8737868 Acfer_1383 Acidaminococcus fermentans DSM 20731 threonyl/alanyl tRNA synthetase SAD YP_003399058.1 1532491 R 591001 CDS YP_003399059.1 284048720 8737869 complement(1533665..1534663) 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dol:Dole_1501 radical SAM domain-containing protein; radical SAM protein 1534663 8737869 Acfer_1384 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399059.1 1533665 R 591001 CDS YP_003399060.1 284048721 8737870 1534874..1535899 1 NC_013740.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: ere:EUBREC_2380 branched-chain-amino-acid transaminase (IlvE); branched-chain amino acid aminotransferase 1535899 8737870 Acfer_1385 Acidaminococcus fermentans DSM 20731 branched-chain amino acid aminotransferase YP_003399060.1 1534874 D 591001 CDS YP_003399061.1 284048722 8737871 1536256..1537929 1 NC_013740.1 KEGG: gtn:GTNG_0884 methyl-accepting chemotaxis protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; Cache domain protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase 1537929 8737871 Acfer_1386 Acidaminococcus fermentans DSM 20731 diguanylate cyclase YP_003399061.1 1536256 D 591001 CDS YP_003399062.1 284048723 8737872 1538188..1539855 1 NC_013740.1 KEGG: mpt:Mpe_A0214 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; diguanylate cyclase 1539855 8737872 Acfer_1387 Acidaminococcus fermentans DSM 20731 diguanylate cyclase YP_003399062.1 1538188 D 591001 CDS YP_003399063.1 284048724 8737873 complement(1539914..1540618) 1 NC_013740.1 KEGG: hor:Hore_10320 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1540618 8737873 Acfer_1388 Acidaminococcus fermentans DSM 20731 ribonuclease III YP_003399063.1 1539914 R 591001 CDS YP_003399064.1 284048725 8737874 complement(1540631..1541878) 1 NC_013740.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: pth:PTH_1739 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 1541878 8737874 Acfer_1389 Acidaminococcus fermentans DSM 20731 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_003399064.1 1540631 R 591001 CDS YP_003399065.1 284048726 8737875 complement(1541890..1542843) 1 NC_013740.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hmo:HM1_2167 2-nitropropane dioxygenase; 2-nitropropane dioxygenase 1542843 8737875 Acfer_1390 Acidaminococcus fermentans DSM 20731 2-nitropropane dioxygenase YP_003399065.1 1541890 R 591001 CDS YP_003399066.1 284048727 8737876 complement(1542931..1543173) 1 NC_013740.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: drm:Dred_2071 acyl carrier protein; acyl carrier protein 1543173 8737876 Acfer_1391 Acidaminococcus fermentans DSM 20731 acyl carrier protein YP_003399066.1 1542931 R 591001 CDS YP_003399067.1 284048728 8737877 complement(1543214..1543957) 1 NC_013740.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gwc:GWCH70_1081 3-oxoacyl-(acyl-carrier- protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 1543957 8737877 Acfer_1392 Acidaminococcus fermentans DSM 20731 3-oxoacyl-(acyl-carrier-protein) reductase YP_003399067.1 1543214 R 591001 CDS YP_003399068.1 284048729 8737878 complement(1543959..1544906) 1 NC_013740.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: drm:Dred_2073 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 1544906 8737878 Acfer_1393 Acidaminococcus fermentans DSM 20731 malonyl CoA-acyl carrier protein transacylase YP_003399068.1 1543959 R 591001 CDS YP_003399069.1 284048730 8737879 complement(1544903..1545913) 1 NC_013740.1 KEGG: tte:TTE1475 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III 1545913 8737879 Acfer_1394 Acidaminococcus fermentans DSM 20731 3-oxoacyl-(acyl-carrier-protein) synthase III YP_003399069.1 1544903 R 591001 CDS YP_003399070.1 284048731 8737880 complement(1545914..1546930) 1 NC_013740.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: pth:PTH_1746 putative glycerol-3-phosphate acyltransferase PlsX; fatty acid/phospholipid synthesis protein PlsX 1546930 8737880 Acfer_1395 Acidaminococcus fermentans DSM 20731 fatty acid/phospholipid synthesis protein PlsX YP_003399070.1 1545914 R 591001 CDS YP_003399071.1 284048732 8737881 complement(1546914..1547504) 1 NC_013740.1 PFAM: regulatory protein DeoR; KEGG: tte:TTE1477 fatty acid biosynthesis transcriptional regulator; regulatory protein DeoR 1547504 8737881 Acfer_1396 Acidaminococcus fermentans DSM 20731 regulatory protein DeoR YP_003399071.1 1546914 R 591001 CDS YP_003399072.1 284048733 8737882 complement(1547621..1548277) 1 NC_013740.1 KEGG: bhy:BHWA1_01968 transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase 1548277 8737882 Acfer_1397 Acidaminococcus fermentans DSM 20731 transaldolase YP_003399072.1 1547621 R 591001 CDS YP_003399073.1 284048734 8737883 complement(1548425..1548607) 1 NC_013740.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: cno:NT01CX_2222 50S ribosomal protein L32; 50S ribosomal protein L32 1548607 8737883 Acfer_1398 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L32 YP_003399073.1 1548425 R 591001 CDS YP_003399074.1 284048735 8737884 complement(1548632..1549135) 1 NC_013740.1 PFAM: protein of unknown function DUF177; KEGG: aac:Aaci_1339 protein of unknown function DUF177; hypothetical protein 1549135 8737884 Acfer_1399 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399074.1 1548632 R 591001 CDS YP_003399075.1 284048736 8737885 complement(1549198..1550394) 1 NC_013740.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: aoe:Clos_1447 acetate kinase; acetate kinase 1550394 8737885 Acfer_1400 Acidaminococcus fermentans DSM 20731 acetate kinase YP_003399075.1 1549198 R 591001 CDS YP_003399076.1 284048737 8737886 1550510..1551733 1 NC_013740.1 PFAM: protein of unknown function DUF795; KEGG: pjd:Pjdr2_3498 protein of unknown function DUF795; hypothetical protein 1551733 8737886 Acfer_1401 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399076.1 1550510 D 591001 CDS YP_003399077.1 284048738 8737887 complement(1551765..1552331) 1 NC_013740.1 KEGG: dsy:DSY2671 hypothetical protein; hypothetical protein 1552331 8737887 Acfer_1402 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399077.1 1551765 R 591001 CDS YP_003399078.1 284048739 8737888 complement(1552358..1552852) 1 NC_013740.1 KEGG: ate:Athe_1227 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase 1552852 8737888 Acfer_1403 Acidaminococcus fermentans DSM 20731 pantetheine-phosphate adenylyltransferase YP_003399078.1 1552358 R 591001 CDS YP_003399079.1 284048740 8737889 complement(1552906..1553460) 1 NC_013740.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: cdf:CD2559 hypothetical protein; methyltransferase 1553460 8737889 Acfer_1404 Acidaminococcus fermentans DSM 20731 methyltransferase YP_003399079.1 1552906 R 591001 CDS YP_003399080.1 284048741 8737890 1553521..1555176 1 NC_013740.1 KEGG: tte:TTE2409 hypothetical protein; hypothetical protein 1555176 8737890 Acfer_1405 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399080.1 1553521 D 591001 CDS YP_003399081.1 284048742 8737893 complement(1557381..1558604) 1 NC_013740.1 KEGG: sha:SH0243 hypothetical protein; hypothetical protein 1558604 8737893 Acfer_1407 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399081.1 1557381 R 591001 CDS YP_003399082.1 284048743 8737894 complement(1558604..1561201) 1 NC_013740.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1 repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 1561201 8737894 Acfer_1408 Acidaminococcus fermentans DSM 20731 Sel1 domain-containing protein repeat-containing protein YP_003399082.1 1558604 R 591001 CDS YP_003399083.1 284048744 8737895 1561516..1562979 1 NC_013740.1 KEGG: cyn:Cyan7425_3973 KWG leptospira repeat protein; hypothetical protein 1562979 8737895 Acfer_1409 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399083.1 1561516 D 591001 CDS YP_003399084.1 284048745 8737896 1563194..1563388 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cpy:Cphy_1553 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin 1563388 8737896 Acfer_1410 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003399084.1 1563194 D 591001 CDS YP_003399085.1 284048746 8737897 complement(1563483..1564916) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: gtn:GTNG_3237 aminobenzoyl-glutamate utilization protein B; amidohydrolase 1564916 8737897 Acfer_1411 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399085.1 1563483 R 591001 CDS YP_003399086.1 284048747 8737898 complement(1565016..1565576) 1 NC_013740.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cpy:Cphy_1509 hemerythrin HHE cation binding domain-containing protein; hemerythrin hhE cation binding domain-containing protein 1565576 8737898 Acfer_1412 Acidaminococcus fermentans DSM 20731 hemerythrin hhE cation binding domain-containing protein YP_003399086.1 1565016 R 591001 CDS YP_003399087.1 284048748 8737899 complement(1565589..1566197) 1 NC_013740.1 KEGG: cpy:Cphy_1508 hypothetical protein; hypothetical protein 1566197 8737899 Acfer_1413 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399087.1 1565589 R 591001 CDS YP_003399088.1 284048749 8737900 complement(1566212..1566421) 1 NC_013740.1 PFAM: Domain of unknown function DUF1858; KEGG: hypothetical protein; hypothetical protein 1566421 8737900 Acfer_1414 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399088.1 1566212 R 591001 CDS YP_003399089.1 284048750 8737901 complement(1566549..1567649) 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: ere:EUBREC_0234 biotin synthase; radical SAM protein 1567649 8737901 Acfer_1415 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399089.1 1566549 R 591001 CDS YP_003399090.1 284048751 8737902 complement(1567689..1567889) 1 NC_013740.1 hypothetical protein 1567889 8737902 Acfer_1416 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399090.1 1567689 R 591001 CDS YP_003399091.1 284048752 8737904 complement(1568093..1568569) 1 NC_013740.1 PFAM: protein of unknown function DUF567; KEGG: cpy:Cphy_1292 hypothetical protein; hypothetical protein 1568569 8737904 Acfer_1417 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399091.1 1568093 R 591001 CDS YP_003399092.1 284048753 8737905 complement(1568887..1570092) 1 NC_013740.1 KEGG: sat:SYN_02177 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1570092 8737905 Acfer_1418 Acidaminococcus fermentans DSM 20731 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_003399092.1 1568887 R 591001 CDS YP_003399093.1 284048754 8737906 complement(1570106..1570327) 1 NC_013740.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: cth:Cthe_1314 DNA-directed RNA polymerase, omega subunit; DNA-directed RNA polymerase subunit omega 1570327 8737906 Acfer_1419 Acidaminococcus fermentans DSM 20731 DNA-directed RNA polymerase subunit omega YP_003399093.1 1570106 R 591001 CDS YP_003399094.1 284048755 8737907 complement(1570343..1570987) 1 NC_013740.1 KEGG: tex:Teth514_1761 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; guanylate kinase 1570987 8737907 Acfer_1420 Acidaminococcus fermentans DSM 20731 guanylate kinase YP_003399094.1 1570343 R 591001 CDS YP_003399095.1 284048756 8737908 complement(1570980..1571270) 1 NC_013740.1 PFAM: protein of unknown function DUF370; KEGG: cac:CAC1717 hypothetical protein; hypothetical protein 1571270 8737908 Acfer_1421 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399095.1 1570980 R 591001 CDS YP_003399096.1 284048757 8737909 complement(1571291..1572187) 1 NC_013740.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: pth:PTH_1797 hypothetical protein; YicC domain-containing protein 1572187 8737909 Acfer_1422 Acidaminococcus fermentans DSM 20731 YicC domain-containing protein YP_003399096.1 1571291 R 591001 CDS YP_003399097.1 284048758 8737910 complement(1572201..1572824) 1 NC_013740.1 hypothetical protein 1572824 8737910 Acfer_1423 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399097.1 1572201 R 591001 CDS YP_003399098.1 284048759 8737911 1572928..1574667 1 NC_013740.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: tpd:Teth39_1330 fibronectin-binding A domain- containing protein; fibronectin-binding A domain-containing protein 1574667 8737911 Acfer_1424 Acidaminococcus fermentans DSM 20731 fibronectin-binding A domain-containing protein YP_003399098.1 1572928 D 591001 CDS YP_003399099.1 284048760 8737912 1574761..1576428 1 NC_013740.1 KEGG: mta:Moth_2259 dihydroxyacid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase 1576428 8737912 Acfer_1425 Acidaminococcus fermentans DSM 20731 dihydroxy-acid dehydratase YP_003399099.1 1574761 D 591001 CDS YP_003399100.1 284048761 8737913 complement(1576489..1577847) 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cbk:CLL_A1589 Na+-driven multidrug efflux pump; MATE efflux family protein 1577847 8737913 Acfer_1426 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003399100.1 1576489 R 591001 CDS YP_003399101.1 284048762 8737914 complement(1578101..1580095) 1 NC_013740.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; t-RNA-binding domain protein; KEGG: fma:FMG_0987 lysyl-tRNA synthetase class II; lysyl-tRNA synthetase 1580095 8737914 Acfer_1427 Acidaminococcus fermentans DSM 20731 lysyl-tRNA synthetase YP_003399101.1 1578101 R 591001 CDS YP_003399102.1 284048763 8737915 complement(1580127..1580645) 1 NC_013740.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: hmo:HM1_0644 transcription elongation factor GreA; GreA/GreB family elongation factor 1580645 8737915 Acfer_1428 Acidaminococcus fermentans DSM 20731 GreA/GreB family elongation factor YP_003399102.1 1580127 R 591001 CDS YP_003399103.1 284048764 8737916 complement(1580884..1581999) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: ere:EUBREC_3385 hypothetical protein; citrate transporter 1581999 8737916 Acfer_1429 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003399103.1 1580884 R 591001 CDS YP_003399104.1 284048765 8737917 complement(1582111..1582620) 1 NC_013740.1 PFAM: Redoxin domain protein; KEGG: gwc:GWCH70_2710 redoxin domain protein; redoxin domain-containing protein 1582620 8737917 Acfer_1430 Acidaminococcus fermentans DSM 20731 redoxin domain-containing protein YP_003399104.1 1582111 R 591001 CDS YP_003399105.1 284048766 8737918 complement(1582775..1584406) 1 NC_013740.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: hmo:HM1_1422 chaperonin GroEL; chaperonin GroEL 1584406 8737918 Acfer_1431 Acidaminococcus fermentans DSM 20731 chaperonin GroEL YP_003399105.1 1582775 R 591001 CDS YP_003399106.1 284048767 8737919 complement(1584480..1584770) 1 NC_013740.1 PFAM: Chaperonin Cpn10; KEGG: lwe:lwe2090 co-chaperonin GroES; chaperonin Cpn10 1584770 8737919 Acfer_1432 Acidaminococcus fermentans DSM 20731 chaperonin Cpn10 YP_003399106.1 1584480 R 591001 CDS YP_003399107.1 284048768 8737920 complement(1584896..1585156) 1 NC_013740.1 PFAM: cysteine-rich small domain; KEGG: dsa:Desal_0255 cysteine-rich small domain protein; hypothetical protein 1585156 8737920 Acfer_1433 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399107.1 1584896 R 591001 CDS YP_003399108.1 284048769 8737921 complement(1585153..1586007) 1 NC_013740.1 KEGG: sth:STH3249 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase- like; dimethyladenosine transferase 1586007 8737921 Acfer_1434 Acidaminococcus fermentans DSM 20731 dimethyladenosine transferase YP_003399108.1 1585153 R 591001 CDS YP_003399109.1 284048770 8737922 complement(1586011..1586556) 1 NC_013740.1 KEGG: aoe:Clos_2658 primase/topoisomerase like protein; TIGRFAM: primase/topoisomerase like protein; PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; primase/topoisomerase-like protein 1586556 8737922 Acfer_1435 Acidaminococcus fermentans DSM 20731 primase/topoisomerase-like protein YP_003399109.1 1586011 R 591001 CDS YP_003399110.1 284048771 8737923 complement(1586573..1587559) 1 NC_013740.1 PFAM: 3D domain protein; G5 domain protein; protein of unknown function DUF348; KEGG: tpd:Teth39_2135 3D domain-containing protein; hypothetical protein 1587559 8737923 Acfer_1436 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399110.1 1586573 R 591001 CDS YP_003399111.1 284048772 8737924 complement(1587695..1588480) 1 NC_013740.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: pth:PTH_0070 Mg-dependent DNase; TatD family hydrolase 1588480 8737924 Acfer_1437 Acidaminococcus fermentans DSM 20731 TatD family hydrolase YP_003399111.1 1587695 R 591001 CDS YP_003399112.1 284048773 8737925 complement(1588482..1590434) 1 NC_013740.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; KEGG: mta:Moth_0048 methionyl-tRNA synthetase; methionyl-tRNA synthetase 1590434 8737925 Acfer_1438 Acidaminococcus fermentans DSM 20731 methionyl-tRNA synthetase YP_003399112.1 1588482 R 591001 CDS YP_003399113.1 284048774 8737926 complement(1590588..1592396) 1 NC_013740.1 hypothetical protein 1592396 8737926 Acfer_1439 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399113.1 1590588 R 591001 CDS YP_003399114.1 284048775 8737927 complement(1592398..1595568) 1 NC_013740.1 KEGG: fps:FP0848 hypothetical protein; hypothetical protein 1595568 8737927 Acfer_1440 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399114.1 1592398 R 591001 CDS YP_003399115.1 284048776 8737928 complement(1595790..1597181) 1 NC_013740.1 KEGG: cdf:CD0522 putative signaling protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 1597181 8737928 Acfer_1441 Acidaminococcus fermentans DSM 20731 diguanylate cyclase YP_003399115.1 1595790 R 591001 CDS YP_003399116.1 284048777 8737929 complement(1597308..1597910) 1 NC_013740.1 PFAM: nitroreductase; KEGG: cac:CAC3314 nitroreductase family protein; nitroreductase 1597910 8737929 Acfer_1442 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003399116.1 1597308 R 591001 CDS YP_003399117.1 284048778 8737930 complement(1598136..1599014) 1 NC_013740.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: amt:Amet_0375 UTP-glucose-1-phosphate uridylyltransferase; UTP-glucose-1-phosphate uridylyltransferase 1599014 8737930 Acfer_1443 Acidaminococcus fermentans DSM 20731 UTP-glucose-1-phosphate uridylyltransferase YP_003399117.1 1598136 R 591001 CDS YP_003399118.1 284048779 8737931 complement(1599011..1599640) 1 NC_013740.1 KEGG: hmo:HM1_0724 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1599640 8737931 Acfer_1444 Acidaminococcus fermentans DSM 20731 peptidyl-tRNA hydrolase YP_003399118.1 1599011 R 591001 CDS YP_003399119.1 284048780 8737932 complement(1599709..1600674) 1 NC_013740.1 KEGG: chy:CHY_0193 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 1600674 8737932 Acfer_1445 Acidaminococcus fermentans DSM 20731 ribose-phosphate pyrophosphokinase YP_003399119.1 1599709 R 591001 CDS YP_003399120.1 284048781 8737933 complement(1600893..1602266) 1 NC_013740.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; KEGG: drm:Dred_0099 UDP-N-acetylglucosamine pyrophosphorylase; UDP-N-acetylglucosamine pyrophosphorylase 1602266 8737933 Acfer_1446 Acidaminococcus fermentans DSM 20731 UDP-N-acetylglucosamine pyrophosphorylase YP_003399120.1 1600893 R 591001 CDS YP_003399121.1 284048782 8737934 complement(1602288..1603499) 1 NC_013740.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: gka:GK1591 threonine dehydratase; threonine dehydratase 1603499 8737934 Acfer_1447 Acidaminococcus fermentans DSM 20731 threonine dehydratase YP_003399121.1 1602288 R 591001 CDS YP_003399122.1 284048783 8737935 complement(1603537..1604349) 1 NC_013740.1 TIGRFAM: pur operon repressor; PFAM: purine repressor ; phosphoribosyltransferase; KEGG: hor:Hore_21340 purine operon repressor, PurR; pur operon repressor 1604349 8737935 Acfer_1448 Acidaminococcus fermentans DSM 20731 pur operon repressor YP_003399122.1 1603537 R 591001 CDS YP_003399123.1 284048784 8737936 complement(1604349..1605065) 1 NC_013740.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: drm:Dred_0095 GntR family transcriptional regulator; GntR family transcriptional regulator 1605065 8737936 Acfer_1449 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003399123.1 1604349 R 591001 CDS YP_003399124.1 284048785 8737937 complement(1605073..1605930) 1 NC_013740.1 KEGG: mta:Moth_0072 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1605930 8737937 Acfer_1450 Acidaminococcus fermentans DSM 20731 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_003399124.1 1605073 R 591001 CDS YP_003399125.1 284048786 8737938 1606210..1607082 1 NC_013740.1 PFAM: Protein of unknown function DUF2179; protein of unknown function DUF161; KEGG: tpd:Teth39_1269 hypothetical protein; hypothetical protein 1607082 8737938 Acfer_1451 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399125.1 1606210 D 591001 CDS YP_003399126.1 284048787 8737939 complement(1607288..1608487) 1 NC_013740.1 TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; KEGG: cno:NT01CX_2103 sodium/glutamate symporter; sodium/glutamate symporter 1608487 8737939 Acfer_1452 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003399126.1 1607288 R 591001 CDS YP_003399127.1 284048788 8737940 complement(1608510..1609571) 1 NC_013740.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: gtn:GTNG_2449 DNA polymerase III subunit delta; DNA polymerase III subunit delta 1609571 8737940 Acfer_1453 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunit delta YP_003399127.1 1608510 R 591001 CDS YP_003399128.1 284048789 8737941 complement(1609585..1611942) 1 NC_013740.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; KEGG: dae:Dtox_3303 DNA internalization-related competence protein ComEC/Rec2; DNA internalization-related competence protein ComEC/Rec2 1611942 8737941 Acfer_1454 Acidaminococcus fermentans DSM 20731 DNA internalization-related competence protein ComEC/Rec2 YP_003399128.1 1609585 R 591001 CDS YP_003399129.1 284048790 8737942 complement(1611944..1612591) 1 NC_013740.1 PFAM: Soluble ligand binding domain; helix-hairpin- helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: chy:CHY_0402 competence protein; soluble ligand binding domain-containing protein 1612591 8737942 Acfer_1455 Acidaminococcus fermentans DSM 20731 soluble ligand binding domain-containing protein YP_003399129.1 1611944 R 591001 CDS YP_003399130.1 284048791 8737943 1612826..1613614 1 NC_013740.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dat:HRM2_09570 NagD; HAD-superfamily hydrolase 1613614 8737943 Acfer_1456 Acidaminococcus fermentans DSM 20731 HAD-superfamily hydrolase YP_003399130.1 1612826 D 591001 CDS YP_003399131.1 284048792 8737945 complement(1614079..1614846) 1 NC_013740.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: mta:Moth_1126 extracellular solute-binding protein; family 3 extracellular solute-binding protein 1614846 8737945 Acfer_1457 Acidaminococcus fermentans DSM 20731 family 3 extracellular solute-binding protein YP_003399131.1 1614079 R 591001 CDS YP_003399132.1 284048793 8737946 1615272..1615871 1 NC_013740.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: eat:EAT1b_1042 diguanylate cyclase and metal dependent phosphohydrolase; metal dependent phosphohydrolase 1615871 8737946 Acfer_1458 Acidaminococcus fermentans DSM 20731 metal dependent phosphohydrolase YP_003399132.1 1615272 D 591001 CDS YP_003399133.1 284048794 8737947 1616144..1616398 1 NC_013740.1 KEGG: dvl:Dvul_0611 hypothetical protein; hypothetical protein 1616398 8737947 Acfer_1459 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399133.1 1616144 D 591001 CDS YP_003399134.1 284048795 8737948 1616418..1617152 1 NC_013740.1 PFAM: protein of unknown function DUF554; KEGG: lsa:LSA1347 integral membrane protein; hypothetical protein 1617152 8737948 Acfer_1460 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399134.1 1616418 D 591001 CDS YP_003399135.1 284048796 8737949 complement(1617202..1618371) 1 NC_013740.1 KEGG: eel:EUBELI_20375 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein; alanine racemase 1618371 8737949 Acfer_1461 Acidaminococcus fermentans DSM 20731 alanine racemase YP_003399135.1 1617202 R 591001 CDS YP_003399136.1 284048797 8737950 complement(1618465..1619466) 1 NC_013740.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sen:SACE_3233 inosine-uridine preferring nucleoside hydrolase; inosine/uridine-preferring nucleoside hydrolase 1619466 8737950 Acfer_1462 Acidaminococcus fermentans DSM 20731 inosine/uridine-preferring nucleoside hydrolase YP_003399136.1 1618465 R 591001 CDS YP_003399137.1 284048798 8737951 1619609..1620169 1 NC_013740.1 KEGG: afo:Afer_0600 membrane-flanked domain protein; hypothetical protein 1620169 8737951 Acfer_1463 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399137.1 1619609 D 591001 CDS YP_003399138.1 284048799 8737952 complement(1620315..1622189) 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cth:Cthe_3148 ABC transporter related protein; ABC transporter 1622189 8737952 Acfer_1464 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399138.1 1620315 R 591001 CDS YP_003399139.1 284048800 8737953 complement(1622182..1623984) 1 NC_013740.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: cth:Cthe_3147 ABC transporter related protein; ABC transporter 1623984 8737953 Acfer_1465 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399139.1 1622182 R 591001 CDS YP_003399140.1 284048801 8737954 complement(1624072..1624746) 1 NC_013740.1 KEGG: tgr:Tgr7_0129 competence protein F; competence protein F 1624746 8737954 Acfer_1466 Acidaminococcus fermentans DSM 20731 competence protein F YP_003399140.1 1624072 R 591001 CDS YP_003399141.1 284048802 8737955 complement(1624953..1627118) 1 NC_013740.1 KEGG: dde:Dde_2725 helicase RecD/TraA; TIGRFAM: helicase, RecD/TraA family; SMART: AAA ATPase; Helix-hairpin-helix DNA-binding class 1; helicase, RecD/TraA family 1627118 8737955 Acfer_1467 Acidaminococcus fermentans DSM 20731 helicase, RecD/TraA family YP_003399141.1 1624953 R 591001 CDS YP_003399142.1 284048803 8737956 1627263..1627727 1 NC_013740.1 PFAM: S-adenosylmethionine decarboxylase related; KEGG: drm:Dred_2200 S-adenosylmethionine decarboxylase proenzyme; S-adenosylmethionine decarboxylase-like protein 1627727 8737956 Acfer_1468 Acidaminococcus fermentans DSM 20731 S-adenosylmethionine decarboxylase-like protein YP_003399142.1 1627263 D 591001 CDS YP_003399143.1 284048804 8737957 1627790..1628479 1 NC_013740.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ote:Oter_4195 hydrolase; haloacid dehalogenase domain-containing protein hydrolase 1628479 8737957 Acfer_1469 Acidaminococcus fermentans DSM 20731 haloacid dehalogenase domain-containing protein hydrolase YP_003399143.1 1627790 D 591001 CDS YP_003399144.1 284048805 8737958 1628481..1629230 1 NC_013740.1 PFAM: pentapeptide repeat protein; KEGG: npu:Npun_R2559 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 1629230 8737958 Acfer_1470 Acidaminococcus fermentans DSM 20731 pentapeptide repeat-containing protein YP_003399144.1 1628481 D 591001 CDS YP_003399145.1 284048806 8737959 complement(1629274..1630287) 1 NC_013740.1 KEGG: lba:Lebu_0327 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 1630287 8737959 Acfer_1471 Acidaminococcus fermentans DSM 20731 phosphate acetyltransferase YP_003399145.1 1629274 R 591001 CDS YP_003399146.1 284048807 8737960 complement(1630482..1630985) 1 NC_013740.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: fnu:FN0550 mannose-1-phosphate guanylyl transferase (GDP); cupin 1630985 8737960 Acfer_1472 Acidaminococcus fermentans DSM 20731 cupin YP_003399146.1 1630482 R 591001 CDS YP_003399147.1 284048808 8737961 complement(1631161..1632534) 1 NC_013740.1 PFAM: peptidase M18 aminopeptidase I; KEGG: amt:Amet_3140 putative aminopeptidase 1; peptidase M18 aminopeptidase I 1632534 8737961 Acfer_1473 Acidaminococcus fermentans DSM 20731 peptidase M18 aminopeptidase I YP_003399147.1 1631161 R 591001 CDS YP_003399148.1 284048809 8737962 complement(1632593..1633702) 1 NC_013740.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: gtn:GTNG_3239 putative anhydromuramoyl- peptide exo-beta-N-acetylglucosaminidase; glycoside hydrolase family protein 1633702 8737962 Acfer_1474 Acidaminococcus fermentans DSM 20731 glycoside hydrolase family protein YP_003399148.1 1632593 R 591001 CDS YP_003399149.1 284048810 8737963 complement(1633857..1634648) 1 NC_013740.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: chy:CHY_1601 3-hydroxybutyryl-CoA dehydratase; Enoyl-CoA hydratase/isomerase 1634648 8737963 Acfer_1475 Acidaminococcus fermentans DSM 20731 Enoyl-CoA hydratase/isomerase YP_003399149.1 1633857 R 591001 CDS YP_003399150.1 284048811 8737964 complement(1634669..1635526) 1 NC_013740.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: tte:TTE0548 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 1635526 8737964 Acfer_1476 Acidaminococcus fermentans DSM 20731 3-hydroxybutyryl-CoA dehydrogenase YP_003399150.1 1634669 R 591001 CDS YP_003399151.1 284048812 8737965 complement(1635668..1636819) 1 NC_013740.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: chy:CHY_1350 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase 1636819 8737965 Acfer_1477 Acidaminococcus fermentans DSM 20731 acyl-CoA dehydrogenase YP_003399151.1 1635668 R 591001 CDS YP_003399152.1 284048813 8737966 complement(1636901..1638082) 1 NC_013740.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ctc:CTC00312 acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 1638082 8737966 Acfer_1478 Acidaminococcus fermentans DSM 20731 acetyl-CoA acetyltransferase YP_003399152.1 1636901 R 591001 CDS YP_003399153.1 284048814 8737967 complement(1638278..1638679) 1 NC_013740.1 KEGG: afu:AF1024 reverse gyrase; hypothetical protein 1638679 8737967 Acfer_1479 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399153.1 1638278 R 591001 CDS YP_003399154.1 284048815 8737968 complement(1638690..1640216) 1 NC_013740.1 hypothetical protein 1640216 8737968 Acfer_1480 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399154.1 1638690 R 591001 CDS YP_003399155.1 284048816 8737969 complement(1640273..1640902) 1 NC_013740.1 KEGG: cno:NT01CX_1394 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III 1640902 8737969 Acfer_1481 Acidaminococcus fermentans DSM 20731 endonuclease III YP_003399155.1 1640273 R 591001 CDS YP_003399156.1 284048817 8737970 complement(1640902..1642263) 1 NC_013740.1 PFAM: protein of unknown function DUF711; KEGG: drm:Dred_1672 hypothetical protein; hypothetical protein 1642263 8737970 Acfer_1482 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399156.1 1640902 R 591001 CDS YP_003399157.1 284048818 8737971 complement(1642276..1642545) 1 NC_013740.1 PFAM: amino acid-binding ACT domain protein; KEGG: drm:Dred_1671 hypothetical protein; ACT domain-containing protein 1642545 8737971 Acfer_1483 Acidaminococcus fermentans DSM 20731 ACT domain-containing protein YP_003399157.1 1642276 R 591001 CDS YP_003399158.1 284048819 8737972 complement(1642598..1642720) 1 NC_013740.1 hypothetical protein 1642720 8737972 Acfer_1484 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399158.1 1642598 R 591001 CDS YP_003399159.1 284048820 8737973 1642944..1643819 1 NC_013740.1 KEGG: eel:EUBELI_00451 phosphoribosylaminoimidazole- succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1643819 8737973 Acfer_1485 Acidaminococcus fermentans DSM 20731 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_003399159.1 1642944 D 591001 CDS YP_003399160.1 284048821 8737974 complement(1644032..1644787) 1 NC_013740.1 PFAM: purine or other phosphorylase family 1; KEGG: bwe:BcerKBAB4_3050 purine phosphorylase family 1; purine or other phosphorylase family 1 1644787 8737974 Acfer_1486 Acidaminococcus fermentans DSM 20731 purine or other phosphorylase family 1 YP_003399160.1 1644032 R 591001 CDS YP_003399161.1 284048822 8737975 complement(1644792..1645514) 1 NC_013740.1 PFAM: protein of unknown function DUF541; KEGG: mxa:MXAN_7203 putative 28 kDa outer membrane protein; hypothetical protein 1645514 8737975 Acfer_1487 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399161.1 1644792 R 591001 CDS YP_003399162.1 284048823 8737976 complement(1645581..1646090) 1 NC_013740.1 PFAM: protein of unknown function UPF0074; KEGG: ele:Elen_0624 transcriptional regulator, BadM/Rrf2 family; AsnC family transcriptional regulator 1646090 8737976 Acfer_1488 Acidaminococcus fermentans DSM 20731 AsnC family transcriptional regulator YP_003399162.1 1645581 R 591001 CDS YP_003399163.1 284048824 8737977 complement(1646142..1647059) 1 NC_013740.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ele:Elen_1892 thioredoxin reductase; thioredoxin reductase 1647059 8737977 Acfer_1489 Acidaminococcus fermentans DSM 20731 thioredoxin reductase YP_003399163.1 1646142 R 591001 CDS YP_003399164.1 284048825 8737978 complement(1647056..1647382) 1 NC_013740.1 PFAM: Thioredoxin domain; KEGG: bhe:BH00260 thioredoxin; Thioredoxin domain protein 1647382 8737978 Acfer_1490 Acidaminococcus fermentans DSM 20731 Thioredoxin domain protein YP_003399164.1 1647056 R 591001 CDS YP_003399165.1 284048826 8737979 complement(1647543..1648850) 1 NC_013740.1 PFAM: Na+/H+ antiporter NhaC-like; KEGG: fnu:FN0624 Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC-like protein 1648850 8737979 Acfer_1491 Acidaminococcus fermentans DSM 20731 Na+/H+ antiporter NhaC-like protein YP_003399165.1 1647543 R 591001 CDS YP_003399166.1 284048827 8737980 complement(1648908..1649342) 1 NC_013740.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17670 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1649342 8737980 Acfer_1492 Acidaminococcus fermentans DSM 20731 outer membrane chaperone Skp YP_003399166.1 1648908 R 591001 CDS YP_003399167.1 284048828 8737981 complement(1649531..1649731) 1 NC_013740.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mbu:Mbur_0613 heavy metal transport/detoxification protein; heavy metal transport/detoxification protein 1649731 8737981 Acfer_1493 Acidaminococcus fermentans DSM 20731 heavy metal transport/detoxification protein YP_003399167.1 1649531 R 591001 CDS YP_003399168.1 284048829 8737982 complement(1649775..1650065) 1 NC_013740.1 PFAM: protein of unknown function DUF156; KEGG: cpy:Cphy_3876 hypothetical protein; hypothetical protein 1650065 8737982 Acfer_1494 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399168.1 1649775 R 591001 CDS YP_003399169.1 284048830 8737983 complement(1650174..1652978) 1 NC_013740.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: cce:Ccel_1855 isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1652978 8737983 Acfer_1495 Acidaminococcus fermentans DSM 20731 isoleucyl-tRNA synthetase YP_003399169.1 1650174 R 591001 CDS YP_003399170.1 284048831 8737984 complement(1653271..1654053) 1 NC_013740.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase; tRNA/rRNA methyltransferase SpoU 1654053 8737984 Acfer_1496 Acidaminococcus fermentans DSM 20731 tRNA/rRNA methyltransferase SpoU YP_003399170.1 1653271 R 591001 CDS YP_003399171.1 284048832 8737985 complement(1654050..1654709) 1 NC_013740.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: cno:NT01CX_1765 trk system potassium uptake protein TrkA; TrkA-N domain-containing protein 1654709 8737985 Acfer_1497 Acidaminococcus fermentans DSM 20731 TrkA-N domain-containing protein YP_003399171.1 1654050 R 591001 CDS YP_003399172.1 284048833 8737986 complement(1654726..1656054) 1 NC_013740.1 KEGG: gka:GK0212 trk family K(+) transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; TrkH family potassium uptake protein 1656054 8737986 Acfer_1498 Acidaminococcus fermentans DSM 20731 TrkH family potassium uptake protein YP_003399172.1 1654726 R 591001 CDS YP_003399173.1 284048834 8737987 complement(1656066..1657079) 1 NC_013740.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ere:EUBREC_1724 L-lactate dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase 1657079 8737987 Acfer_1499 Acidaminococcus fermentans DSM 20731 FMN-dependent alpha-hydroxy acid dehydrogenase YP_003399173.1 1656066 R 591001 CDS YP_003399174.1 284048835 8737988 1657318..1658469 1 NC_013740.1 KEGG: tte:TTE0252 Na+-transporting methylmalonyl- CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 1658469 8737988 Acfer_1500 Acidaminococcus fermentans DSM 20731 sodium ion-translocating decarboxylase subunit beta YP_003399174.1 1657318 D 591001 CDS YP_003399175.1 284048836 8737989 1658483..1658605 1 NC_013740.1 hypothetical protein 1658605 8737989 Acfer_1501 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399175.1 1658483 D 591001 CDS YP_003399176.1 284048837 8737991 1660604..1661440 1 NC_013740.1 PFAM: tetracycline resistance leader peptide; KEGG: cbt:CLH_2455 hypothetical protein; tetracycline resistance leader peptide 1661440 8737991 Acfer_1503 Acidaminococcus fermentans DSM 20731 tetracycline resistance leader peptide YP_003399176.1 1660604 D 591001 CDS YP_003399177.1 284048838 8737992 1661675..1662436 1 NC_013740.1 KEGG: msu:MS2255 hypothetical protein; hypothetical protein 1662436 8737992 Acfer_1504 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399177.1 1661675 D 591001 CDS YP_003399178.1 284048839 8737993 complement(1662469..1663386) 1 NC_013740.1 KEGG: dhd:Dhaf_3767 signal recognition particle- docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 1663386 8737993 Acfer_1505 Acidaminococcus fermentans DSM 20731 signal recognition particle-docking protein FtsY YP_003399178.1 1662469 R 591001 CDS YP_003399179.1 284048840 8737994 complement(1663383..1666946) 1 NC_013740.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: gka:GK1193 chromosome segregation ATPase (SMC); chromosome segregation protein SMC 1666946 8737994 Acfer_1506 Acidaminococcus fermentans DSM 20731 chromosome segregation protein SMC YP_003399179.1 1663383 R 591001 CDS YP_003399180.1 284048841 8737995 complement(1666959..1667510) 1 NC_013740.1 PFAM: phosphoribosyltransferase; KEGG: hor:Hore_09350 uracil phosphoribosyltransferase; uracil phosphoribosyltransferase 1667510 8737995 Acfer_1507 Acidaminococcus fermentans DSM 20731 uracil phosphoribosyltransferase YP_003399180.1 1666959 R 591001 CDS YP_003399181.1 284048842 8737996 complement(1667526..1668443) 1 NC_013740.1 KEGG: drm:Dred_1673 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 1668443 8737996 Acfer_1508 Acidaminococcus fermentans DSM 20731 RluA family pseudouridine synthase YP_003399181.1 1667526 R 591001 CDS YP_003399182.1 284048843 8737997 complement(1668440..1668919) 1 NC_013740.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: nth:Nther_1323 lipoprotein signal peptidase; lipoprotein signal peptidase 1668919 8737997 Acfer_1509 Acidaminococcus fermentans DSM 20731 lipoprotein signal peptidase YP_003399182.1 1668440 R 591001 CDS YP_003399183.1 284048844 8737999 complement(1669196..1669846) 1 NC_013740.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ere:EUBREC_0355 putative phosphatase; HAD-superfamily hydrolase 1669846 8737999 Acfer_1510 Acidaminococcus fermentans DSM 20731 HAD-superfamily hydrolase YP_003399183.1 1669196 R 591001 CDS YP_003399184.1 284048845 8738000 1670237..1670791 1 NC_013740.1 hypothetical protein 1670791 8738000 Acfer_1511 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399184.1 1670237 D 591001 CDS YP_003399185.1 284048846 8738001 complement(1671179..1672975) 1 NC_013740.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; KEGG: pth:PTH_1049 aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 1672975 8738001 Acfer_1512 Acidaminococcus fermentans DSM 20731 aspartyl-tRNA synthetase YP_003399185.1 1671179 R 591001 CDS YP_003399186.1 284048847 8738002 complement(1672997..1674250) 1 NC_013740.1 KEGG: drm:Dred_0756 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1674250 8738002 Acfer_1513 Acidaminococcus fermentans DSM 20731 histidyl-tRNA synthetase YP_003399186.1 1672997 R 591001 CDS YP_003399187.1 284048848 8738003 complement(1674304..1675374) 1 NC_013740.1 PFAM: protein of unknown function UPF0118; KEGG: pth:PTH_1059 permease; hypothetical protein 1675374 8738003 Acfer_1514 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399187.1 1674304 R 591001 CDS YP_003399188.1 284048849 8738004 complement(1675387..1676010) 1 NC_013740.1 KEGG: drm:Dred_0735 beta-lactamase domain- containing protein; beta-lactamase domain-containing protein 1676010 8738004 Acfer_1515 Acidaminococcus fermentans DSM 20731 beta-lactamase domain-containing protein YP_003399188.1 1675387 R 591001 CDS YP_003399189.1 284048850 8738005 complement(1676027..1676476) 1 NC_013740.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: tna:CTN_1854 D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 1676476 8738005 Acfer_1516 Acidaminococcus fermentans DSM 20731 D-tyrosyl-tRNA(Tyr) deacylase YP_003399189.1 1676027 R 591001 CDS YP_003399190.1 284048851 8738006 complement(1676484..1678706) 1 NC_013740.1 KEGG: mta:Moth_1680 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain protein; amino acid-binding ACT domain protein; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA 1678706 8738006 Acfer_1517 Acidaminococcus fermentans DSM 20731 (p)ppGpp synthetase I SpoT/RelA YP_003399190.1 1676484 R 591001 CDS YP_003399191.1 284048852 8738007 complement(1678711..1681059) 1 NC_013740.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: hor:Hore_12210 single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1681059 8738007 Acfer_1518 Acidaminococcus fermentans DSM 20731 single-stranded-DNA-specific exonuclease RecJ YP_003399191.1 1678711 R 591001 CDS YP_003399192.1 284048853 8738008 complement(1681069..1681464) 1 NC_013740.1 KEGG: tpd:Teth39_1436 hypothetical protein; hypothetical protein 1681464 8738008 Acfer_1519 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399192.1 1681069 R 591001 CDS YP_003399193.1 284048854 8738009 complement(1681590..1682537) 1 NC_013740.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bad:BAD_0967 hypothetical protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1682537 8738009 Acfer_1520 Acidaminococcus fermentans DSM 20731 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003399193.1 1681590 R 591001 CDS YP_003399194.1 284048855 8738010 complement(1682829..1683710) 1 NC_013740.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: dau:Daud_1355 preprotein translocase subunit SecF; protein-export membrane protein SecF 1683710 8738010 Acfer_1521 Acidaminococcus fermentans DSM 20731 protein-export membrane protein SecF YP_003399194.1 1682829 R 591001 CDS YP_003399195.1 284048856 8738011 complement(1683707..1684960) 1 NC_013740.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: pth:PTH_1035 preprotein translocase subunit SecD; protein-export membrane protein SecD 1684960 8738011 Acfer_1522 Acidaminococcus fermentans DSM 20731 protein-export membrane protein SecD YP_003399195.1 1683707 R 591001 CDS YP_003399196.1 284048857 8738012 complement(1684973..1685548) 1 NC_013740.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cno:NT01CX_1657 5-formyltetrahydrofolate cyclo-ligase family protein; 5-formyltetrahydrofolate cyclo-ligase 1685548 8738012 Acfer_1523 Acidaminococcus fermentans DSM 20731 5-formyltetrahydrofolate cyclo-ligase YP_003399196.1 1684973 R 591001 CDS YP_003399197.1 284048858 8738013 complement(1685548..1685916) 1 NC_013740.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: sth:STH1168 hypothetical protein; preprotein translocase subunit YajC 1685916 8738013 Acfer_1524 Acidaminococcus fermentans DSM 20731 preprotein translocase subunit YajC YP_003399197.1 1685548 R 591001 CDS YP_003399198.1 284048859 8738014 complement(1685923..1687044) 1 NC_013740.1 KEGG: cdf:CD2802 queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA- guanine transglycosylase, various specificities; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 1687044 8738014 Acfer_1525 Acidaminococcus fermentans DSM 20731 queuine tRNA-ribosyltransferase YP_003399198.1 1685923 R 591001 CDS YP_003399199.1 284048860 8738015 complement(1687055..1688071) 1 NC_013740.1 TIGRFAM:S-adenosylmethionine/tRNA- ribosyltransferase -isomerase; PFAM: Queuosine biosynthesis protein; KEGG: tte:TTE1182 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 1688071 8738015 Acfer_1526 Acidaminococcus fermentans DSM 20731 S-adenosylmethionine/tRNA-ribosyltransferase- isomerase YP_003399199.1 1687055 R 591001 CDS YP_003399200.1 284048861 8738016 complement(1688085..1689392) 1 NC_013740.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: amr:AM1_5748 SpoIID/LytB domain-containing protein; SpoIID/LytB domain-containing protein 1689392 8738016 Acfer_1527 Acidaminococcus fermentans DSM 20731 SpoIID/LytB domain-containing protein YP_003399200.1 1688085 R 591001 CDS YP_003399201.1 284048862 8738017 complement(1689389..1690405) 1 NC_013740.1 KEGG: hmo:HM1_1829 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 1690405 8738017 Acfer_1528 Acidaminococcus fermentans DSM 20731 Holliday junction DNA helicase RuvB YP_003399201.1 1689389 R 591001 CDS YP_003399202.1 284048863 8738018 complement(1690406..1691020) 1 NC_013740.1 KEGG: cth:Cthe_0181 Holliday junction DNA helicase subunit RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; helix-hairpin-helix motif; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; Holliday junction DNA helicase RuvA 1691020 8738018 Acfer_1529 Acidaminococcus fermentans DSM 20731 Holliday junction DNA helicase RuvA YP_003399202.1 1690406 R 591001 CDS YP_003399203.1 284048864 8738019 complement(1691017..1691514) 1 NC_013740.1 KEGG: bbe:BBR47_18640 crossover junction endodeoxyribonuclease; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 1691514 8738019 Acfer_1530 Acidaminococcus fermentans DSM 20731 crossover junction endodeoxyribonuclease RuvC YP_003399203.1 1691017 R 591001 CDS YP_003399204.1 284048865 8738020 complement(1691618..1692349) 1 NC_013740.1 PFAM: protein of unknown function DUF28; KEGG: dae:Dtox_1103 protein of unknown function DUF28; hypothetical protein 1692349 8738020 Acfer_1531 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399204.1 1691618 R 591001 CDS YP_003399205.1 284048866 8738021 complement(1692439..1693953) 1 NC_013740.1 PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; KEGG: nth:Nther_0884 hydrogenase large subunit domain protein; hydrogenase large subunit domain-containing protein 1693953 8738021 Acfer_1532 Acidaminococcus fermentans DSM 20731 hydrogenase large subunit domain-containing protein YP_003399205.1 1692439 R 591001 CDS YP_003399206.1 284048867 8738022 complement(1694165..1695667) 1 NC_013740.1 KEGG: cth:Cthe_1381 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase 1695667 8738022 Acfer_1533 Acidaminococcus fermentans DSM 20731 threonine synthase YP_003399206.1 1694165 R 591001 CDS YP_003399207.1 284048868 8738023 1695866..1697773 1 NC_013740.1 TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pth:PTH_0918 hypothetical protein; NAD+ synthetase 1697773 8738023 Acfer_1534 Acidaminococcus fermentans DSM 20731 NAD+ synthetase YP_003399207.1 1695866 D 591001 CDS YP_003399208.1 284048869 8738024 1697770..1698255 1 NC_013740.1 PFAM: protein of unknown function DUF988; KEGG: cbe:Cbei_0741 hypothetical protein; hypothetical protein 1698255 8738024 Acfer_1535 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399208.1 1697770 D 591001 CDS YP_003399209.1 284048870 8738025 complement(1698294..1698569) 1 NC_013740.1 KEGG: bvu:BVU_2290 hypothetical protein; hypothetical protein 1698569 8738025 Acfer_1536 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399209.1 1698294 R 591001 CDS YP_003399210.1 284048871 8738026 1698690..1699661 1 NC_013740.1 KEGG: eel:EUBELI_20420 biotin synthetase; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase 1699661 8738026 Acfer_1537 Acidaminococcus fermentans DSM 20731 biotin synthase YP_003399210.1 1698690 D 591001 CDS YP_003399211.1 284048872 8738027 complement(1699698..1700240) 1 NC_013740.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: msi:Msm_1733 rubrerythrin; rubrerythrin 1700240 8738027 Acfer_1538 Acidaminococcus fermentans DSM 20731 rubrerythrin YP_003399211.1 1699698 R 591001 CDS YP_003399212.1 284048873 8738028 complement(1700390..1701544) 1 NC_013740.1 KEGG: dau:Daud_0847 copper amine oxidase domain- containing protein; hypothetical protein 1701544 8738028 Acfer_1539 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399212.1 1700390 R 591001 CDS YP_003399213.1 284048874 8738029 1701767..1702582 1 NC_013740.1 KEGG: ctc:CTC02312 hypothetical protein; hypothetical protein 1702582 8738029 Acfer_1540 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399213.1 1701767 D 591001 CDS YP_003399214.1 284048875 8738031 complement(1702836..1703666) 1 NC_013740.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: vpa:VP0379 putative ABC transporter substrate binding protein; lipoprotein 1703666 8738031 Acfer_1541 Acidaminococcus fermentans DSM 20731 lipoprotein YP_003399214.1 1702836 R 591001 CDS YP_003399215.1 284048876 8738032 complement(1703776..1704891) 1 NC_013740.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: fma:FMG_1311 hypothetical protein; Methionine synthase vitamin-B12 independent 1704891 8738032 Acfer_1542 Acidaminococcus fermentans DSM 20731 Methionine synthase vitamin-B12 independent YP_003399215.1 1703776 R 591001 CDS YP_003399216.1 284048877 8738033 complement(1705055..1705324) 1 NC_013740.1 KEGG: ere:EUBREC_0176 hypothetical protein; hypothetical protein 1705324 8738033 Acfer_1543 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399216.1 1705055 R 591001 CDS YP_003399217.1 284048878 8738034 complement(1705346..1705756) 1 NC_013740.1 PFAM: VanZ family protein; KEGG: cpe:CPE0070 phosphotransbutyrylase; VanZ family protein 1705756 8738034 Acfer_1544 Acidaminococcus fermentans DSM 20731 VanZ family protein YP_003399217.1 1705346 R 591001 CDS YP_003399218.1 284048879 8738035 complement(1705836..1705976) 1 NC_013740.1 hypothetical protein 1705976 8738035 Acfer_1545 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399218.1 1705836 R 591001 CDS YP_003399219.1 284048880 8738036 1706128..1707081 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2867 LysR family transcriptional regulator; LysR family transcriptional regulator 1707081 8738036 Acfer_1546 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399219.1 1706128 D 591001 CDS YP_003399220.1 284048881 8738037 1707185..1707505 1 NC_013740.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: blj:BLD_1091 arsenical resistance operon repressor; ArsR family transcriptional regulator 1707505 8738037 Acfer_1547 Acidaminococcus fermentans DSM 20731 ArsR family transcriptional regulator YP_003399220.1 1707185 D 591001 CDS YP_003399221.1 284048882 8738038 1707570..1708055 1 NC_013740.1 PFAM: Arsenical resistance operon trans-acting repressor ArsD; KEGG: dsy:DSY4151 hypothetical protein; arsenical resistance operon trans-acting repressor ArsD 1708055 8738038 Acfer_1548 Acidaminococcus fermentans DSM 20731 arsenical resistance operon trans-acting repressor ArsD YP_003399221.1 1707570 D 591001 CDS YP_003399222.1 284048883 8738039 1708071..1709804 1 NC_013740.1 KEGG: dhd:Dhaf_1189 arsenite-activated ATPase ArsA; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; arsenite-activated ATPase ArsA 1709804 8738039 Acfer_1549 Acidaminococcus fermentans DSM 20731 arsenite-activated ATPase ArsA YP_003399222.1 1708071 D 591001 CDS YP_003399223.1 284048884 8738040 1709801..1710217 1 NC_013740.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: eel:EUBELI_01655 arsenate reductase; protein-tyrosine phosphatase 1710217 8738040 Acfer_1550 Acidaminococcus fermentans DSM 20731 protein-tyrosine phosphatase YP_003399223.1 1709801 D 591001 CDS YP_003399224.1 284048885 8738041 1710214..1711257 1 NC_013740.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: blj:BLD_1095 arsenite efflux pump; arsenical-resistance protein 1711257 8738041 Acfer_1551 Acidaminococcus fermentans DSM 20731 arsenical-resistance protein YP_003399224.1 1710214 D 591001 CDS YP_003399225.1 284048886 8738045 complement(1717337..1718857) 1 NC_013740.1 KEGG: cth:Cthe_1459 hypothetical protein; hypothetical protein 1718857 8738045 Acfer_1552 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399225.1 1717337 R 591001 CDS YP_003399226.1 284048887 8738046 complement(1718868..1719743) 1 NC_013740.1 KEGG: vha:VIBHAR_p08196 hypothetical protein; hypothetical protein 1719743 8738046 Acfer_1553 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399226.1 1718868 R 591001 CDS YP_003399227.1 284048888 8738047 1719960..1720667 1 NC_013740.1 PFAM: LytTr DNA-binding region; KEGG: dhd:Dhaf_1994 two component transcriptional regulator, LytTR family; response regulator receiver protein 1720667 8738047 Acfer_1554 Acidaminococcus fermentans DSM 20731 response regulator receiver protein YP_003399227.1 1719960 D 591001 CDS YP_003399228.1 284048889 8738048 complement(1720748..1722136) 1 NC_013740.1 KEGG: hmo:HM1_1957 fad dependent oxidoreductase, putative; fad dependent oxidoreductase 1722136 8738048 Acfer_1555 Acidaminococcus fermentans DSM 20731 fad dependent oxidoreductase YP_003399228.1 1720748 R 591001 CDS YP_003399229.1 284048890 8738049 complement(1722133..1723092) 1 NC_013740.1 KEGG: ddr:Deide_20680 putative beta-lactamase (penicillinase); Beta-lactamase class A-like protein 1723092 8738049 Acfer_1556 Acidaminococcus fermentans DSM 20731 Beta-lactamase class A-like protein YP_003399229.1 1722133 R 591001 CDS YP_003399230.1 284048891 8738050 complement(1723089..1723808) 1 NC_013740.1 PFAM: protein of unknown function DUF45; KEGG: cth:Cthe_0542 hypothetical protein; hypothetical protein 1723808 8738050 Acfer_1557 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399230.1 1723089 R 591001 CDS YP_003399231.1 284048892 8738051 1723854..1725152 1 NC_013740.1 PFAM: protein of unknown function DUF21; hypothetical protein; transporter-associated region; SMART: hypothetical protein; KEGG: afl:Aflv_2310 hemolysin related protein containing CBS domains; hypothetical protein 1725152 8738051 Acfer_1558 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399231.1 1723854 D 591001 CDS YP_003399232.1 284048893 8738052 1725255..1725785 1 NC_013740.1 PFAM: isochorismatase hydrolase; KEGG: dhd:Dhaf_2040 isochorismatase hydrolase; isochorismatase hydrolase 1725785 8738052 Acfer_1559 Acidaminococcus fermentans DSM 20731 isochorismatase hydrolase YP_003399232.1 1725255 D 591001 CDS YP_003399233.1 284048894 8738053 complement(1725825..1726340) 1 NC_013740.1 PFAM: nitroreductase; KEGG: ckr:CKR_0293 hypothetical protein; nitroreductase 1726340 8738053 Acfer_1560 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003399233.1 1725825 R 591001 CDS YP_003399234.1 284048895 8738054 complement(1726480..1727298) 1 NC_013740.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: cbe:Cbei_3615 methionine aminopeptidase, type I; methionine aminopeptidase 1727298 8738054 Acfer_1561 Acidaminococcus fermentans DSM 20731 methionine aminopeptidase YP_003399234.1 1726480 R 591001 CDS YP_003399235.1 284048896 8738055 1727527..1728423 1 NC_013740.1 PFAM: protein of unknown function DUF368; KEGG: cbk:CLL_A2966 hypothetical protein; hypothetical protein 1728423 8738055 Acfer_1562 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399235.1 1727527 D 591001 CDS YP_003399236.1 284048897 8738056 1728641..1728853 1 NC_013740.1 PFAM: FeoA family protein; KEGG: eel:EUBELI_00572 hypothetical protein; FeoA family protein 1728853 8738056 Acfer_1563 Acidaminococcus fermentans DSM 20731 FeoA family protein YP_003399236.1 1728641 D 591001 CDS YP_003399237.1 284048898 8738057 1728871..1729098 1 NC_013740.1 PFAM: FeoA family protein; KEGG: dhd:Dhaf_3460 FeoA family protein; FeoA family protein 1729098 8738057 Acfer_1564 Acidaminococcus fermentans DSM 20731 FeoA family protein YP_003399237.1 1728871 D 591001 CDS YP_003399238.1 284048899 8738058 1729172..1731337 1 NC_013740.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: cpy:Cphy_1194 ferrous iron transport protein B; ferrous iron transport protein B 1731337 8738058 Acfer_1565 Acidaminococcus fermentans DSM 20731 ferrous iron transport protein B YP_003399238.1 1729172 D 591001 CDS YP_003399239.1 284048900 8738059 1731451..1731591 1 NC_013740.1 KEGG: eel:EUBELI_00575 hypothetical protein; hypothetical protein 1731591 8738059 Acfer_1566 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399239.1 1731451 D 591001 CDS YP_003399240.1 284048901 8738060 complement(1731626..1732258) 1 NC_013740.1 KEGG: lba:Lebu_1430 hypothetical protein; hypothetical protein 1732258 8738060 Acfer_1567 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399240.1 1731626 R 591001 CDS YP_003399241.1 284048902 8738061 complement(1732255..1732524) 1 NC_013740.1 hypothetical protein 1732524 8738061 Acfer_1568 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399241.1 1732255 R 591001 CDS YP_003399242.1 284048903 8738063 complement(1733069..1734823) 1 NC_013740.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: bth:BT_1403 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1734823 8738063 Acfer_1570 Acidaminococcus fermentans DSM 20731 1-deoxy-D-xylulose-5-phosphate synthase YP_003399242.1 1733069 R 591001 CDS YP_003399243.1 284048904 8738064 complement(1734989..1735993) 1 NC_013740.1 KEGG: pth:PTH_2212 phosphatase; hypothetical protein 1735993 8738064 Acfer_1571 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399243.1 1734989 R 591001 CDS YP_003399244.1 284048905 8738065 complement(1736029..1736262) 1 NC_013740.1 hypothetical protein 1736262 8738065 Acfer_1572 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399244.1 1736029 R 591001 CDS YP_003399245.1 284048906 8738066 complement(1736259..1736678) 1 NC_013740.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: msu:MS2158 hypothetical protein; cupin 1736678 8738066 Acfer_1573 Acidaminococcus fermentans DSM 20731 cupin YP_003399245.1 1736259 R 591001 CDS YP_003399246.1 284048907 8738067 1736789..1737685 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: lmo:lmo0430 hypothetical protein; LysR family transcriptional regulator 1737685 8738067 Acfer_1574 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399246.1 1736789 D 591001 CDS YP_003399247.1 284048908 8738068 1737821..1739728 1 NC_013740.1 PFAM: acyl-CoA dehydrogenase domain protein; Electron transfer flavoprotein alpha subunit ; Rubredoxin- type Fe(Cys)4 protein; KEGG: cbi:CLJ_B3073 acyl-CoA dehydrogenase family protein/electron transfer protein; acyl-CoA dehydrogenase 1739728 8738068 Acfer_1575 Acidaminococcus fermentans DSM 20731 acyl-CoA dehydrogenase YP_003399247.1 1737821 D 591001 CDS YP_003399248.1 284048909 8738069 1739745..1740956 1 NC_013740.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: bhy:BHWA1_02229 putative flavoprotein; flavodoxin/nitric oxide synthase 1740956 8738069 Acfer_1576 Acidaminococcus fermentans DSM 20731 flavodoxin/nitric oxide synthase YP_003399248.1 1739745 D 591001 CDS YP_003399249.1 284048910 8738070 complement(1741101..1742678) 1 NC_013740.1 PFAM: transposase IS4 family protein; KEGG: dsy:DSY1297 hypothetical protein; transposase IS4 family protein 1742678 8738070 Acfer_1577 Acidaminococcus fermentans DSM 20731 transposase IS4 family protein YP_003399249.1 1741101 R 591001 CDS YP_003399250.1 284048911 8738071 complement(1742817..1743836) 1 NC_013740.1 KEGG: cbi:CLJ_B3594 metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 1743836 8738071 Acfer_1578 Acidaminococcus fermentans DSM 20731 glycoprotease family metalloendopeptidase YP_003399250.1 1742817 R 591001 CDS YP_003399251.1 284048912 8738072 complement(1743849..1744304) 1 NC_013740.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: aoe:Clos_2468 ribosomal-protein-alanine acetyltransferase; ribosomal-protein-alanine acetyltransferase 1744304 8738072 Acfer_1579 Acidaminococcus fermentans DSM 20731 ribosomal-protein-alanine acetyltransferase YP_003399251.1 1743849 R 591001 CDS YP_003399252.1 284048913 8738073 complement(1744274..1744975) 1 NC_013740.1 PFAM: peptidase M22 glycoprotease; KEGG: cce:Ccel_0800 peptidase M22 glycoprotease; peptidase M22 glycoprotease 1744975 8738073 Acfer_1580 Acidaminococcus fermentans DSM 20731 peptidase M22 glycoprotease YP_003399252.1 1744274 R 591001 CDS YP_003399253.1 284048914 8738074 complement(1744980..1745459) 1 NC_013740.1 PFAM: protein of unknown function UPF0079; KEGG: cdf:CD0149 putative ATP/GTP hydrolase; hypothetical protein 1745459 8738074 Acfer_1581 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399253.1 1744980 R 591001 CDS YP_003399254.1 284048915 8738075 complement(1745763..1747322) 1 NC_013740.1 KEGG: mta:Moth_0633 phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase (ATP) 1747322 8738075 Acfer_1582 Acidaminococcus fermentans DSM 20731 phosphoenolpyruvate carboxykinase (ATP) YP_003399254.1 1745763 R 591001 CDS YP_003399255.1 284048916 8738076 complement(1747497..1748630) 1 NC_013740.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: drm:Dred_1490 butyryl-CoA dehydrogenase; acyl-CoA dehydrogenase 1748630 8738076 Acfer_1583 Acidaminococcus fermentans DSM 20731 acyl-CoA dehydrogenase YP_003399255.1 1747497 R 591001 CDS YP_003399256.1 284048917 8738077 complement(1748688..1749128) 1 NC_013740.1 PFAM: thioesterase superfamily protein; KEGG: snt:SPT_1768 thioesterase family protein; thioesterase superfamily protein 1749128 8738077 Acfer_1584 Acidaminococcus fermentans DSM 20731 thioesterase superfamily protein YP_003399256.1 1748688 R 591001 CDS YP_003399257.1 284048918 8738078 complement(1749168..1749752) 1 NC_013740.1 PFAM: 3D domain protein; Peptidoglycan-binding domain 1 protein; KEGG: swo:Swol_0756 hypothetical protein; hypothetical protein 1749752 8738078 Acfer_1585 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399257.1 1749168 R 591001 CDS YP_003399258.1 284048919 8738079 complement(1749779..1751683) 1 NC_013740.1 PFAM: glutamine synthetase catalytic region; KEGG: cpf:CPF_2894 putative glutamine synthetase; glutamine synthetase 1751683 8738079 Acfer_1586 Acidaminococcus fermentans DSM 20731 glutamine synthetase YP_003399258.1 1749779 R 591001 CDS YP_003399259.1 284048920 8738080 complement(1752185..1752502) 1 NC_013740.1 KEGG: fnu:FN1583 hypothetical protein; hypothetical protein 1752502 8738080 Acfer_1587 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399259.1 1752185 R 591001 CDS YP_003399260.1 284048921 8738081 complement(1752638..1753819) 1 NC_013740.1 PFAM: protein of unknown function DUF819; KEGG: fnu:FN1585 hypothetical protein; hypothetical protein 1753819 8738081 Acfer_1588 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399260.1 1752638 R 591001 CDS YP_003399261.1 284048922 8738082 complement(1753855..1754949) 1 NC_013740.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: fnu:FN1586 O-succinylbenzoate-CoA synthase; mandelate racemase/muconate lactonizing protein 1754949 8738082 Acfer_1589 Acidaminococcus fermentans DSM 20731 mandelate racemase/muconate lactonizing protein YP_003399261.1 1753855 R 591001 CDS YP_003399262.1 284048923 8738083 complement(1755037..1756416) 1 NC_013740.1 TIGRFAM: dipeptidase; PFAM: peptidase M20; KEGG: cac:CAC2723 dipeptidase PepV; dipeptidase 1756416 8738083 Acfer_1590 Acidaminococcus fermentans DSM 20731 dipeptidase YP_003399262.1 1755037 R 591001 CDS YP_003399263.1 284048924 8738084 1756763..1758160 1 NC_013740.1 PFAM: beta-lactamase; KEGG: phe:Phep_2231 beta-lactamase; beta-lactamase 1758160 8738084 Acfer_1591 Acidaminococcus fermentans DSM 20731 beta-lactamase YP_003399263.1 1756763 D 591001 CDS YP_003399264.1 284048925 8738085 complement(1758221..1759216) 1 NC_013740.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: ere:EUBREC_0061 tRNA-dihydrouridine synthase; nifR3 family TIM-barrel protein 1759216 8738085 Acfer_1592 Acidaminococcus fermentans DSM 20731 nifR3 family TIM-barrel protein YP_003399264.1 1758221 R 591001 CDS YP_003399265.1 284048926 8738086 complement(1759581..1760351) 1 NC_013740.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: pth:PTH_0258 pantothenate kinase; transcriptional activator, Baf family 1760351 8738086 Acfer_1593 Acidaminococcus fermentans DSM 20731 transcriptional activator, Baf family YP_003399265.1 1759581 R 591001 CDS YP_003399266.1 284048927 8738087 complement(1760569..1761129) 1 NC_013740.1 PFAM: BioY protein; KEGG: dal:Dalk_0377 BioY protein; BioY protein 1761129 8738087 Acfer_1594 Acidaminococcus fermentans DSM 20731 BioY protein YP_003399266.1 1760569 R 591001 CDS YP_003399267.1 284048928 8738088 complement(1761126..1762121) 1 NC_013740.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; Helix-turn- helix type 11 domain protein; biotin protein ligase domain protein; KEGG: pth:PTH_0255 biotin-(acetyl-CoA carboxylase) ligase; biotin--acetyl-CoA-carboxylase ligase 1762121 8738088 Acfer_1595 Acidaminococcus fermentans DSM 20731 biotin--acetyl-CoA-carboxylase ligase YP_003399267.1 1761126 R 591001 CDS YP_003399268.1 284048929 8738089 complement(1762392..1764329) 1 NC_013740.1 KEGG: hmo:HM1_0678 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 1764329 8738089 Acfer_1596 Acidaminococcus fermentans DSM 20731 ATP-dependent metalloprotease FtsH YP_003399268.1 1762392 R 591001 CDS YP_003399269.1 284048930 8738090 complement(1764384..1764923) 1 NC_013740.1 KEGG: chy:CHY_1067 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1764923 8738090 Acfer_1597 Acidaminococcus fermentans DSM 20731 hypoxanthine phosphoribosyltransferase YP_003399269.1 1764384 R 591001 CDS YP_003399270.1 284048931 8738091 complement(1764907..1765959) 1 NC_013740.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dau:Daud_0086 tRNA(Ile)-lysidine synthetase; tRNA(Ile)-lysidine synthetase 1765959 8738091 Acfer_1598 Acidaminococcus fermentans DSM 20731 tRNA(Ile)-lysidine synthetase YP_003399270.1 1764907 R 591001 CDS YP_003399271.1 284048932 8738092 complement(1766014..1766502) 1 NC_013740.1 PFAM: RNA binding S1 domain protein; KEGG: efa:EF0262 hypothetical protein; RNA binding S1 domain-containing protein 1766502 8738092 Acfer_1599 Acidaminococcus fermentans DSM 20731 RNA binding S1 domain-containing protein YP_003399271.1 1766014 R 591001 CDS YP_003399272.1 284048933 8738093 complement(1766691..1769501) 1 NC_013740.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: eel:EUBELI_01464 Cu2+-exporting ATPase; heavy metal translocating P-type ATPase 1769501 8738093 Acfer_1600 Acidaminococcus fermentans DSM 20731 heavy metal translocating P-type ATPase YP_003399272.1 1766691 R 591001 CDS YP_003399273.1 284048934 8738094 complement(1769853..1770308) 1 NC_013740.1 KEGG: cno:NT01CX_1202 hypothetical protein; hypothetical protein 1770308 8738094 Acfer_1601 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399273.1 1769853 R 591001 CDS YP_003399274.1 284048935 8738095 complement(1770305..1771105) 1 NC_013740.1 KEGG: ctc:CTC00669 hypothetical protein; hypothetical protein 1771105 8738095 Acfer_1602 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399274.1 1770305 R 591001 CDS YP_003399275.1 284048936 8738096 complement(1771098..1772411) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cno:NT01CX_1200 putative amidohydrolase; amidohydrolase 1772411 8738096 Acfer_1603 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399275.1 1771098 R 591001 CDS YP_003399276.1 284048937 8738097 complement(1772759..1773988) 1 NC_013740.1 PFAM: MOFRL domain protein; KEGG: cpy:Cphy_2103 hydroxypyruvate reductase; glycerate kinase 1773988 8738097 Acfer_1604 Acidaminococcus fermentans DSM 20731 glycerate kinase YP_003399276.1 1772759 R 591001 CDS YP_003399277.1 284048938 8738098 1774100..1775149 1 NC_013740.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pth:PTH_0619 small-conductance mechanosensitive channel; mechanosensitive ion channel MscS 1775149 8738098 Acfer_1605 Acidaminococcus fermentans DSM 20731 mechanosensitive ion channel MscS YP_003399277.1 1774100 D 591001 CDS YP_003399278.1 284048939 8738099 complement(1775224..1775724) 1 NC_013740.1 PFAM: shikimate kinase; KEGG: cno:NT01CX_0620 shikimate kinase; shikimate kinase 1775724 8738099 Acfer_1606 Acidaminococcus fermentans DSM 20731 shikimate kinase YP_003399278.1 1775224 R 591001 CDS YP_003399279.1 284048940 8738100 complement(1775717..1776541) 1 NC_013740.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: cac:CAC0897 fusion: chorismate mutase and shikimate 5-dehydrogenase; shikimate dehydrogenase 1776541 8738100 Acfer_1607 Acidaminococcus fermentans DSM 20731 shikimate dehydrogenase YP_003399279.1 1775717 R 591001 CDS YP_003399280.1 284048941 8738101 complement(1776538..1777389) 1 NC_013740.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: ckr:CKR_0706 hypothetical protein; Prephenate dehydratase 1777389 8738101 Acfer_1608 Acidaminococcus fermentans DSM 20731 Prephenate dehydratase YP_003399280.1 1776538 R 591001 CDS YP_003399281.1 284048942 8738102 complement(1777394..1778482) 1 NC_013740.1 KEGG: cbe:Cbei_4574 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1778482 8738102 Acfer_1609 Acidaminococcus fermentans DSM 20731 chorismate synthase YP_003399281.1 1777394 R 591001 CDS YP_003399282.1 284048943 8738103 complement(1778463..1779755) 1 NC_013740.1 TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: ckr:CKR_0704 hypothetical protein; 3-phosphoshikimate 1-carboxyvinyltransferase 1779755 8738103 Acfer_1610 Acidaminococcus fermentans DSM 20731 3-phosphoshikimate 1-carboxyvinyltransferase YP_003399282.1 1778463 R 591001 CDS YP_003399283.1 284048944 8738104 complement(1779760..1780824) 1 NC_013740.1 TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; KEGG: cac:CAC0894 3-dehydroquinate synthase; 3-dehydroquinate synthase 1780824 8738104 Acfer_1611 Acidaminococcus fermentans DSM 20731 3-dehydroquinate synthase YP_003399283.1 1779760 R 591001 CDS YP_003399284.1 284048945 8738105 complement(1780805..1781677) 1 NC_013740.1 PFAM: Prephenate dehydrogenase; KEGG: cno:NT01CX_0626 prephenate dehydrogenase; prephenate dehydrogenase 1781677 8738105 Acfer_1612 Acidaminococcus fermentans DSM 20731 prephenate dehydrogenase YP_003399284.1 1780805 R 591001 CDS YP_003399285.1 284048946 8738106 complement(1781702..1782715) 1 NC_013740.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: cbe:Cbei_4577 3-deoxy-7-phosphoheptulonate synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 1782715 8738106 Acfer_1613 Acidaminococcus fermentans DSM 20731 phospho-2-dehydro-3-deoxyheptonate aldolase YP_003399285.1 1781702 R 591001 CDS YP_003399286.1 284048947 8738107 complement(1783114..1783716) 1 NC_013740.1 KEGG: vap:Vapar_3997 alkaline phosphatase; hypothetical protein 1783716 8738107 Acfer_1614 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399286.1 1783114 R 591001 CDS YP_003399287.1 284048948 8738108 1783994..1784842 1 NC_013740.1 PFAM: ATPase-like, ParA/MinD; KEGG: dps:DP2935 hypothetical protein; ParA/MinD-like ATPase 1784842 8738108 Acfer_1615 Acidaminococcus fermentans DSM 20731 ParA/MinD-like ATPase YP_003399287.1 1783994 D 591001 CDS YP_003399288.1 284048949 8738109 complement(1785351..1785632) 1 NC_013740.1 PFAM: Septum formation initiator; KEGG: fma:FMG_0998 hypothetical protein; septum formation initiator 1785632 8738109 Acfer_1616 Acidaminococcus fermentans DSM 20731 septum formation initiator YP_003399288.1 1785351 R 591001 CDS YP_003399289.1 284048950 8738110 complement(1785724..1785999) 1 NC_013740.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: pth:PTH_0121 nucleoid DNA-binding protein; histone family protein DNA-binding protein 1785999 8738110 Acfer_1617 Acidaminococcus fermentans DSM 20731 histone family protein DNA-binding protein YP_003399289.1 1785724 R 591001 CDS YP_003399290.1 284048951 8738111 complement(1786161..1786973) 1 NC_013740.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: afl:Aflv_0051 tetrapyrrole methyltransferase domain fused to a MazG family NTP pyrophosphatase domain; MazG family protein 1786973 8738111 Acfer_1618 Acidaminococcus fermentans DSM 20731 MazG family protein YP_003399290.1 1786161 R 591001 CDS YP_003399291.1 284048952 8738112 complement(1786984..1788531) 1 NC_013740.1 PFAM: polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE; KEGG: swo:Swol_0081 stage V sporulation protein B; polysaccharide biosynthesis protein 1788531 8738112 Acfer_1619 Acidaminococcus fermentans DSM 20731 polysaccharide biosynthesis protein YP_003399291.1 1786984 R 591001 CDS YP_003399292.1 284048953 8738113 complement(1788619..1791897) 1 NC_013740.1 KEGG: chy:CHY_0200 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 1791897 8738113 Acfer_1620 Acidaminococcus fermentans DSM 20731 transcription-repair coupling factor YP_003399292.1 1788619 R 591001 CDS YP_003399293.1 284048954 8738114 complement(1791995..1792957) 1 NC_013740.1 KEGG: chy:CHY_0787 fructose 1,6-bisphosphatase II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; fructose-1,6-bisphosphatase 1792957 8738114 Acfer_1621 Acidaminococcus fermentans DSM 20731 fructose-1,6-bisphosphatase YP_003399293.1 1791995 R 591001 CDS YP_003399294.1 284048955 8738115 complement(1793028..1794647) 1 NC_013740.1 KEGG: drm:Dred_3181 CTP synthetase; TIGRFAM: CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 1794647 8738115 Acfer_1622 Acidaminococcus fermentans DSM 20731 CTP synthase YP_003399294.1 1793028 R 591001 CDS YP_003399295.1 284048956 8738116 complement(1794682..1796340) 1 NC_013740.1 KEGG: chy:CHY_0124 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1796340 8738116 Acfer_1623 Acidaminococcus fermentans DSM 20731 arginyl-tRNA synthetase YP_003399295.1 1794682 R 591001 CDS YP_003399296.1 284048957 8738117 complement(1796282..1796761) 1 NC_013740.1 PFAM: Domain of unknown function DUF1934; KEGG: cac:CAC2894 hypothetical protein; hypothetical protein 1796761 8738117 Acfer_1624 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399296.1 1796282 R 591001 CDS YP_003399297.1 284048958 8738118 1797030..1798517 1 NC_013740.1 TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mac:MA0003 sodium:proline symporter; sodium/proline symporter 1798517 8738118 Acfer_1625 Acidaminococcus fermentans DSM 20731 sodium/proline symporter YP_003399297.1 1797030 D 591001 CDS YP_003399298.1 284048959 8738119 complement(1798772..1799320) 1 NC_013740.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: dtu:Dtur_1084 cytochrome b5; lipoprotein LpqB, GerMN domain-containing protein 1799320 8738119 Acfer_1626 Acidaminococcus fermentans DSM 20731 lipoprotein LpqB, GerMN domain-containing protein YP_003399298.1 1798772 R 591001 CDS YP_003399299.1 284048960 8738120 complement(1799325..1800428) 1 NC_013740.1 KEGG: cbf:CLI_3170 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase 1800428 8738120 Acfer_1627 Acidaminococcus fermentans DSM 20731 N-acetylmuramoyl-L-alanine amidase YP_003399299.1 1799325 R 591001 CDS YP_003399300.1 284048961 8738121 complement(1800553..1802055) 1 NC_013740.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF- family domain protein; KEGG: pth:PTH_0657 carbohydrate kinase; carbohydrate kinase 1802055 8738121 Acfer_1628 Acidaminococcus fermentans DSM 20731 carbohydrate kinase YP_003399300.1 1800553 R 591001 CDS YP_003399301.1 284048962 8738122 complement(1802057..1802431) 1 NC_013740.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: sth:STH2938 holo-(acyl-carrier-protein) synthase; holo-acyl-carrier-protein synthase 1802431 8738122 Acfer_1629 Acidaminococcus fermentans DSM 20731 holo-acyl-carrier-protein synthase YP_003399301.1 1802057 R 591001 CDS YP_003399302.1 284048963 8738123 complement(1802515..1803834) 1 NC_013740.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: asu:Asuc_0073 recombination factor protein RarA; AAA ATPase 1803834 8738123 Acfer_1630 Acidaminococcus fermentans DSM 20731 AAA ATPase YP_003399302.1 1802515 R 591001 CDS YP_003399303.1 284048964 8738124 complement(1804081..1805661) 1 NC_013740.1 PFAM: Cl- channel voltage-gated family protein; TrkA-C domain protein; KEGG: cbe:Cbei_2937 chloride channel, core; Cl- channel voltage-gated family protein 1805661 8738124 Acfer_1631 Acidaminococcus fermentans DSM 20731 Cl- channel voltage-gated family protein YP_003399303.1 1804081 R 591001 CDS YP_003399304.1 284048965 8738125 complement(1805663..1806925) 1 NC_013740.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: ere:EUBREC_1457 diaminopimelate decarboxylase; Orn/DAP/Arg decarboxylase 2 1806925 8738125 Acfer_1632 Acidaminococcus fermentans DSM 20731 Orn/DAP/Arg decarboxylase 2 YP_003399304.1 1805663 R 591001 CDS YP_003399305.1 284048966 8738126 complement(1806959..1807753) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ere:EUBREC_0186 ABC-type uncharacterized transport system, ATPase component; ABC transporter 1807753 8738126 Acfer_1633 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399305.1 1806959 R 591001 CDS YP_003399306.1 284048967 8738127 complement(1807753..1808637) 1 NC_013740.1 PFAM: inner-membrane translocator; KEGG: bhy:BHWA1_00397 hypothetical protein; inner-membrane translocator 1808637 8738127 Acfer_1634 Acidaminococcus fermentans DSM 20731 inner-membrane translocator YP_003399306.1 1807753 R 591001 CDS YP_003399307.1 284048968 8738128 complement(1808641..1809633) 1 NC_013740.1 PFAM: protein of unknown function DUF534; KEGG: dhd:Dhaf_2828 protein of unknown function DUF534; hypothetical protein 1809633 8738128 Acfer_1635 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399307.1 1808641 R 591001 CDS YP_003399308.1 284048969 8738129 complement(1809652..1810638) 1 NC_013740.1 PFAM: protein of unknown function DUF534; KEGG: dhd:Dhaf_2828 protein of unknown function DUF534; hypothetical protein 1810638 8738129 Acfer_1636 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399308.1 1809652 R 591001 CDS YP_003399309.1 284048970 8738130 complement(1810804..1811880) 1 NC_013740.1 TIGRFAM: methyltransferase FkbM family; KEGG: aba:Acid345_2845 methyltransferase FkbM; FkbM family methyltransferase 1811880 8738130 Acfer_1637 Acidaminococcus fermentans DSM 20731 FkbM family methyltransferase YP_003399309.1 1810804 R 591001 CDS YP_003399310.1 284048971 8738131 complement(1811867..1812988) 1 NC_013740.1 PFAM: peptidase M48 Ste24p; KEGG: ank:AnaeK_1042 peptidase M48 Ste24p; peptidase M48 Ste24p 1812988 8738131 Acfer_1638 Acidaminococcus fermentans DSM 20731 peptidase M48 Ste24p YP_003399310.1 1811867 R 591001 CDS YP_003399311.1 284048972 8738132 1813233..1814375 1 NC_013740.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: sfu:Sfum_2821 nuclease SbcCD, D subunit; nuclease SbcCD subunit D 1814375 8738132 Acfer_1639 Acidaminococcus fermentans DSM 20731 nuclease SbcCD subunit D YP_003399311.1 1813233 D 591001 CDS YP_003399312.1 284048973 8738133 1814375..1816648 1 NC_013740.1 KEGG: reu:Reut_B5583 exonuclease SbcC, putative; DNA repair ATPase-like protein 1816648 8738133 Acfer_1640 Acidaminococcus fermentans DSM 20731 DNA repair ATPase-like protein YP_003399312.1 1814375 D 591001 CDS YP_003399313.1 284048974 8738134 complement(1816956..1817612) 1 NC_013740.1 PFAM: Radical SAM domain protein; KEGG: csc:Csac_0105 radical SAM domain-containing protein; radical SAM protein 1817612 8738134 Acfer_1641 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399313.1 1816956 R 591001 CDS YP_003399314.1 284048975 8738135 complement(1817602..1817928) 1 NC_013740.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: bvu:BVU_2082 6-pyruvoyl-tetrahydropterin synthase; 6-pyruvoyl-tetrahydropterin synthase 1817928 8738135 Acfer_1642 Acidaminococcus fermentans DSM 20731 6-pyruvoyl-tetrahydropterin synthase YP_003399314.1 1817602 R 591001 CDS YP_003399315.1 284048976 8738136 complement(1817931..1818629) 1 NC_013740.1 TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; KEGG: shi:Shel_22460 ExsB protein; exsB protein 1818629 8738136 Acfer_1643 Acidaminococcus fermentans DSM 20731 exsB protein YP_003399315.1 1817931 R 591001 CDS YP_003399316.1 284048977 8738137 complement(1818622..1819086) 1 NC_013740.1 KEGG: bay:RBAM_013520 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase 1819086 8738137 Acfer_1644 Acidaminococcus fermentans DSM 20731 7-cyano-7-deazaguanine reductase YP_003399316.1 1818622 R 591001 CDS YP_003399317.1 284048978 8738138 complement(1819353..1819751) 1 NC_013740.1 TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; KEGG: ele:Elen_2296 C_GCAxxG_C_C family protein; C_GCAxxG_C_C family protein 1819751 8738138 Acfer_1645 Acidaminococcus fermentans DSM 20731 C_GCAxxG_C_C family protein YP_003399317.1 1819353 R 591001 CDS YP_003399318.1 284048979 8738139 complement(1819836..1821377) 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: oih:OB3284 aminobenzoyl-glutamate transporter; AbgT transporter 1821377 8738139 Acfer_1646 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003399318.1 1819836 R 591001 CDS YP_003399319.1 284048980 8738140 complement(1821593..1821994) 1 NC_013740.1 hypothetical protein 1821994 8738140 Acfer_1647 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399319.1 1821593 R 591001 CDS YP_003399320.1 284048981 8738141 complement(1822007..1823005) 1 NC_013740.1 KEGG: drm:Dred_2488 hypothetical protein; hypothetical protein 1823005 8738141 Acfer_1648 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399320.1 1822007 R 591001 CDS YP_003399321.1 284048982 8738142 complement(1823002..1823472) 1 NC_013740.1 PFAM: protein of unknown function DUF107; KEGG: esi:Exig_0817 hypothetical protein; hypothetical protein 1823472 8738142 Acfer_1649 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399321.1 1823002 R 591001 CDS YP_003399322.1 284048983 8738146 complement(1824176..1825210) 1 NC_013740.1 PFAM: glycosyl transferase family 9; KEGG: hor:Hore_18880 lipopolysaccharide heptosyltransferase III, putative; glycosyl transferase family protein 1825210 8738146 Acfer_1650 Acidaminococcus fermentans DSM 20731 glycosyl transferase family protein YP_003399322.1 1824176 R 591001 CDS YP_003399323.1 284048984 8738147 complement(1825203..1826255) 1 NC_013740.1 TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: tye:THEYE_A0945 lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase I 1826255 8738147 Acfer_1651 Acidaminococcus fermentans DSM 20731 lipopolysaccharide heptosyltransferase I YP_003399323.1 1825203 R 591001 CDS YP_003399324.1 284048985 8738148 complement(1826252..1826779) 1 NC_013740.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rce:RC1_0817 D,D-heptose 1,7-bisphosphate phosphatase 1, putative; D,D-heptose 1,7-bisphosphate phosphatase 1826779 8738148 Acfer_1652 Acidaminococcus fermentans DSM 20731 D,D-heptose 1,7-bisphosphate phosphatase YP_003399324.1 1826252 R 591001 CDS YP_003399325.1 284048986 8738149 complement(1826776..1827744) 1 NC_013740.1 TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: pca:Pcar_0024 ADP-L-glycero-D-mannoheptose-6- epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1827744 8738149 Acfer_1653 Acidaminococcus fermentans DSM 20731 ADP-L-glycero-D-manno-heptose-6-epimerase YP_003399325.1 1826776 R 591001 CDS YP_003399326.1 284048987 8738150 complement(1827741..1829219) 1 NC_013740.1 TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; KEGG: mfa:Mfla_0769 D-beta-D-heptose 1-phosphate adenylyltransferase / D-alpha,beta-D-heptose 7-phosphate 1- kinase; rfaE bifunctional protein 1829219 8738150 Acfer_1654 Acidaminococcus fermentans DSM 20731 rfaE bifunctional protein YP_003399326.1 1827741 R 591001 CDS YP_003399327.1 284048988 8738151 complement(1829212..1829802) 1 NC_013740.1 TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS); KEGG: rru:Rru_A2605 phosphoheptose isomerase; phosphoheptose isomerase 1829802 8738151 Acfer_1655 Acidaminococcus fermentans DSM 20731 phosphoheptose isomerase YP_003399327.1 1829212 R 591001 CDS YP_003399328.1 284048989 8738152 complement(1829783..1831396) 1 NC_013740.1 hypothetical protein 1831396 8738152 Acfer_1656 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399328.1 1829783 R 591001 CDS YP_003399329.1 284048990 8738153 complement(1831553..1832881) 1 NC_013740.1 KEGG: hor:Hore_17440 hypothetical protein; hypothetical protein 1832881 8738153 Acfer_1657 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399329.1 1831553 R 591001 CDS YP_003399330.1 284048991 8738154 complement(1832939..1833847) 1 NC_013740.1 PFAM: protein of unknown function DUF535; KEGG: vha:VIBHAR_04886 hypothetical protein; hypothetical protein 1833847 8738154 Acfer_1658 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399330.1 1832939 R 591001 CDS YP_003399331.1 284048992 8738155 complement(1834080..1834718) 1 NC_013740.1 hypothetical protein 1834718 8738155 Acfer_1659 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399331.1 1834080 R 591001 CDS YP_003399332.1 284048993 8738156 complement(1834783..1835307) 1 NC_013740.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: pjd:Pjdr2_2866 cell wall hydrolase/autolysin; SH3 type 3 domain-containing protein 1835307 8738156 Acfer_1660 Acidaminococcus fermentans DSM 20731 SH3 type 3 domain-containing protein YP_003399332.1 1834783 R 591001 CDS YP_003399333.1 284048994 8738157 complement(1835380..1837212) 1 NC_013740.1 PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: hypothetical protein; SH3 type 3 domain-containing protein 1837212 8738157 Acfer_1661 Acidaminococcus fermentans DSM 20731 SH3 type 3 domain-containing protein YP_003399333.1 1835380 R 591001 CDS YP_003399334.1 284048995 8738158 complement(1837299..1837943) 1 NC_013740.1 PFAM: protein of unknown function UPF0029; KEGG: eat:EAT1b_0944 protein of unknown function UPF0029; hypothetical protein 1837943 8738158 Acfer_1662 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399334.1 1837299 R 591001 CDS YP_003399335.1 284048996 8738159 1838310..1838714 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 1838714 8738159 Acfer_1663 Acidaminococcus fermentans DSM 20731 putative transposase YP_003399335.1 1838310 D 591001 CDS YP_003399336.1 284048997 8738160 1838726..1839790 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 1839790 8738160 Acfer_1664 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003399336.1 1838726 D 591001 CDS YP_003399337.1 284048998 8738161 1840130..1841407 1 NC_013740.1 PFAM: NLP/P60 protein; KEGG: tpd:Teth39_0205 NLP/P60 protein; NLP/P60 protein 1841407 8738161 Acfer_1665 Acidaminococcus fermentans DSM 20731 NLP/P60 protein YP_003399337.1 1840130 D 591001 CDS YP_003399338.1 284048999 8738162 complement(1841522..1842790) 1 NC_013740.1 PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein); S-layer protein 1842790 8738162 Acfer_1666 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003399338.1 1841522 R 591001 CDS YP_003399339.1 284049000 8738164 complement(1843921..1845219) 1 NC_013740.1 PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein); S-layer protein 1845219 8738164 Acfer_1668 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003399339.1 1843921 R 591001 CDS YP_003399340.1 284049001 8738165 complement(1845521..1846798) 1 NC_013740.1 PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein); S-layer protein 1846798 8738165 Acfer_1669 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003399340.1 1845521 R 591001 CDS YP_003399341.1 284049002 8738166 complement(1847180..1848481) 1 NC_013740.1 PFAM: S-layer domain protein; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein); S-layer protein 1848481 8738166 Acfer_1670 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003399341.1 1847180 R 591001 CDS YP_003399342.1 284049003 8738167 complement(1848761..1849177) 1 NC_013740.1 SMART: Resolvase RNase H domain protein fold; KEGG: syf:Synpcc7942_0129 resolvase, RNase H-like fold; Resolvase RNase H domain-containing protein fold protein 1849177 8738167 Acfer_1671 Acidaminococcus fermentans DSM 20731 Resolvase RNase H domain-containing protein fold protein YP_003399342.1 1848761 R 591001 CDS YP_003399343.1 284049004 8738168 complement(1849170..1850393) 1 NC_013740.1 KEGG: dth:DICTH_0671 hypothetical protein; hypothetical protein 1850393 8738168 Acfer_1672 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399343.1 1849170 R 591001 CDS YP_003399344.1 284049005 8738169 complement(1850630..1851370) 1 NC_013740.1 KEGG: eel:EUBELI_20121 endonuclease; endonuclease 1851370 8738169 Acfer_1673 Acidaminococcus fermentans DSM 20731 endonuclease YP_003399344.1 1850630 R 591001 CDS YP_003399345.1 284049006 8738170 complement(1851367..1851774) 1 NC_013740.1 KEGG: eel:EUBELI_20122 hypothetical protein; hypothetical protein 1851774 8738170 Acfer_1674 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399345.1 1851367 R 591001 CDS YP_003399346.1 284049007 8738171 complement(1851994..1853085) 1 NC_013740.1 PFAM: permease YjgP/YjgQ family protein; KEGG: gvi:gvip124 hypothetical protein; YjgP/YjgQ family permease 1853085 8738171 Acfer_1675 Acidaminococcus fermentans DSM 20731 YjgP/YjgQ family permease YP_003399346.1 1851994 R 591001 CDS YP_003399347.1 284049008 8738172 complement(1853094..1853813) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dfe:Dfer_4049 ABC transporter related; ABC transporter 1853813 8738172 Acfer_1676 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399347.1 1853094 R 591001 CDS YP_003399348.1 284049009 8738173 complement(1853826..1854683) 1 NC_013740.1 PFAM: OstA family protein; KEGG: lba:Lebu_2045 OstA family protein; OstA family protein 1854683 8738173 Acfer_1677 Acidaminococcus fermentans DSM 20731 OstA family protein YP_003399348.1 1853826 R 591001 CDS YP_003399349.1 284049010 8738174 complement(1854683..1855231) 1 NC_013740.1 PFAM: protein of unknown function DUF1239; KEGG: cyh:Cyan8802_4032 protein of unknown function DUF1239; hypothetical protein 1855231 8738174 Acfer_1678 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399349.1 1854683 R 591001 CDS YP_003399350.1 284049011 8738175 complement(1855247..1856116) 1 NC_013740.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: hor:Hore_18900 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 1856116 8738175 Acfer_1679 Acidaminococcus fermentans DSM 20731 lipid A biosynthesis acyltransferase YP_003399350.1 1855247 R 591001 CDS YP_003399351.1 284049012 8738176 complement(1856116..1856658) 1 NC_013740.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sat:SYN_00949 3-deoxy-manno-octulosonate-8- phosphatase; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1856658 8738176 Acfer_1680 Acidaminococcus fermentans DSM 20731 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_003399351.1 1856116 R 591001 CDS YP_003399352.1 284049013 8738177 complement(1856659..1857624) 1 NC_013740.1 KEGG: gsu:GSU1893 carbohydrate isomerase KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); hypothetical protein; SMART: hypothetical protein; KpsF/GutQ family protein 1857624 8738177 Acfer_1681 Acidaminococcus fermentans DSM 20731 KpsF/GutQ family protein YP_003399352.1 1856659 R 591001 CDS YP_003399353.1 284049014 8738178 complement(1857629..1858453) 1 NC_013740.1 TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: gme:Gmet_1277 2-dehydro-3- deoxyphosphooctonate aldolase; 2-dehydro-3-deoxyphosphooctonate aldolase 1858453 8738178 Acfer_1682 Acidaminococcus fermentans DSM 20731 2-dehydro-3-deoxyphosphooctonate aldolase YP_003399353.1 1857629 R 591001 CDS YP_003399354.1 284049015 8738179 complement(1858457..1859203) 1 NC_013740.1 KEGG: gur:Gura_2980 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1859203 8738179 Acfer_1683 Acidaminococcus fermentans DSM 20731 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_003399354.1 1858457 R 591001 CDS YP_003399355.1 284049016 8738180 complement(1859200..1861731) 1 NC_013740.1 KEGG: dol:Dole_1433 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; Three- deoxy-D-manno-octulosonic-acid transferase domain protein; tetraacyldisaccharide 4'-kinase 1861731 8738180 Acfer_1684 Acidaminococcus fermentans DSM 20731 tetraacyldisaccharide 4'-kinase YP_003399355.1 1859200 R 591001 CDS YP_003399356.1 284049017 8738181 complement(1861779..1863575) 1 NC_013740.1 KEGG: hor:Hore_18960 ABC transporter related; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA 1863575 8738181 Acfer_1685 Acidaminococcus fermentans DSM 20731 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA YP_003399356.1 1861779 R 591001 CDS YP_003399357.1 284049018 8738182 complement(1863572..1864708) 1 NC_013740.1 TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; KEGG: gme:Gmet_2350 lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 1864708 8738182 Acfer_1686 Acidaminococcus fermentans DSM 20731 lipid-A-disaccharide synthase YP_003399357.1 1863572 R 591001 CDS YP_003399358.1 284049019 8738183 complement(1864851..1865672) 1 NC_013740.1 PFAM: protein of unknown function DUF1009; KEGG: tye:THEYE_A0089 hypothetical protein; hypothetical protein 1865672 8738183 Acfer_1687 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399358.1 1864851 R 591001 CDS YP_003399359.1 284049020 8738184 complement(1865677..1866486) 1 NC_013740.1 KEGG: hor:Hore_17550 acyl-(acyl-carrier-protein)-- UDP-N-acetylglucosamine O-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylglu cosamineO-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 1866486 8738184 Acfer_1688 Acidaminococcus fermentans DSM 20731 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_003399359.1 1865677 R 591001 CDS YP_003399360.1 284049021 8738185 complement(1866502..1867839) 1 NC_013740.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: ote:Oter_2576 bifunctional UDP-3-O-[3- hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)- hydroxymyristoyl-[acyl-carrier-protein] dehydratase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1867839 8738185 Acfer_1689 Acidaminococcus fermentans DSM 20731 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_003399360.1 1866502 R 591001 CDS YP_003399361.1 284049022 8738186 complement(1867843..1868742) 1 NC_013740.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: hor:Hore_18900 lipid A biosynthesis lauroyl acyltransferase; lipid A biosynthesis acyltransferase 1868742 8738186 Acfer_1690 Acidaminococcus fermentans DSM 20731 lipid A biosynthesis acyltransferase YP_003399361.1 1867843 R 591001 CDS YP_003399362.1 284049023 8738187 complement(1868755..1869363) 1 NC_013740.1 hypothetical protein 1869363 8738187 Acfer_1691 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399362.1 1868755 R 591001 CDS YP_003399363.1 284049024 8738188 complement(1869360..1870400) 1 NC_013740.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; KEGG: tye:THEYE_A0092 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 1870400 8738188 Acfer_1692 Acidaminococcus fermentans DSM 20731 UDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase YP_003399363.1 1869360 R 591001 CDS YP_003399364.1 284049025 8738189 complement(1870469..1870873) 1 NC_013740.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17650 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1870873 8738189 Acfer_1693 Acidaminococcus fermentans DSM 20731 outer membrane chaperone Skp YP_003399364.1 1870469 R 591001 CDS YP_003399365.1 284049026 8738190 complement(1870890..1871822) 1 NC_013740.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: hypothetical protein; outer membrane chaperone Skp 1871822 8738190 Acfer_1694 Acidaminococcus fermentans DSM 20731 outer membrane chaperone Skp YP_003399365.1 1870890 R 591001 CDS YP_003399366.1 284049027 8738191 complement(1871853..1872332) 1 NC_013740.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: hor:Hore_17670 outer membrane chaperone Skp (OmpH); outer membrane chaperone Skp 1872332 8738191 Acfer_1695 Acidaminococcus fermentans DSM 20731 outer membrane chaperone Skp YP_003399366.1 1871853 R 591001 CDS YP_003399367.1 284049028 8738192 complement(1872370..1874583) 1 NC_013740.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: hor:Hore_17680 surface antigen (D15); surface antigen (D15) 1874583 8738192 Acfer_1696 Acidaminococcus fermentans DSM 20731 surface antigen (D15) YP_003399367.1 1872370 R 591001 CDS YP_003399368.1 284049029 8738193 complement(1874742..1879067) 1 NC_013740.1 PFAM: protein of unknown function DUF490; KEGG: amr:AM1_0074 hypothetical protein; hypothetical protein 1879067 8738193 Acfer_1697 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399368.1 1874742 R 591001 CDS YP_003399369.1 284049030 8738194 complement(1879373..1880665) 1 NC_013740.1 PFAM: outer membrane efflux protein; KEGG: dde:Dde_0961 outer membrane protein-like; outer membrane efflux protein 1880665 8738194 Acfer_1698 Acidaminococcus fermentans DSM 20731 outer membrane efflux protein YP_003399369.1 1879373 R 591001 CDS YP_003399370.1 284049031 8738195 complement(1880763..1882016) 1 NC_013740.1 PFAM: Mammalian cell entry related domain protein; KEGG: sat:SYN_00409 ABC-type transport system involved in resistance to organic solvents, periplasmic component; mammalian cell entry domain-containing protein 1882016 8738195 Acfer_1699 Acidaminococcus fermentans DSM 20731 mammalian cell entry domain-containing protein YP_003399370.1 1880763 R 591001 CDS YP_003399371.1 284049032 8738196 complement(1882021..1882773) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00410 ABC-type transport system, ATP- binding component; ABC transporter 1882773 8738196 Acfer_1700 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399371.1 1882021 R 591001 CDS YP_003399372.1 284049033 8738197 complement(1882775..1883557) 1 NC_013740.1 PFAM: protein of unknown function DUF140; KEGG: cyh:Cyan8802_4107 protein of unknown function DUF140; hypothetical protein 1883557 8738197 Acfer_1701 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399372.1 1882775 R 591001 CDS YP_003399373.1 284049034 8738198 complement(1883717..1885483) 1 NC_013740.1 KEGG: hor:Hore_17720 hypothetical protein; hypothetical protein 1885483 8738198 Acfer_1702 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399373.1 1883717 R 591001 CDS YP_003399374.1 284049035 8738199 complement(1885568..1885873) 1 NC_013740.1 KEGG: fal:FRAAL2344 acetyl CoA carboxylase, biotin carboxylase subunit (partial match); acetyl CoA carboxylase, biotin carboxylase subunit 1885873 8738199 Acfer_1703 Acidaminococcus fermentans DSM 20731 acetyl CoA carboxylase, biotin carboxylase subunit YP_003399374.1 1885568 R 591001 CDS YP_003399375.1 284049036 8738200 complement(1886129..1887562) 1 NC_013740.1 KEGG: gka:GK3175 hypothetical protein; N-acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase-like exopolysaccharide biosynthesis protein 1887562 8738200 Acfer_1704 Acidaminococcus fermentans DSM 20731 N-acetylglucosamine-1-phosphodiester alpha-N- acetylglucosaminidase-like exopolysaccharide biosynthesis protein YP_003399375.1 1886129 R 591001 CDS YP_003399376.1 284049037 8738201 complement(1887621..1888652) 1 NC_013740.1 PFAM: cell shape determining protein MreB/Mrl; KEGG: hmo:HM1_1114 cell shape determining protein, MreB/mrl family, putative; cell shape determining protein MreB/Mrl 1888652 8738201 Acfer_1705 Acidaminococcus fermentans DSM 20731 cell shape determining protein MreB/Mrl YP_003399376.1 1887621 R 591001 CDS YP_003399377.1 284049038 8738202 complement(1888659..1889918) 1 NC_013740.1 TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: drm:Dred_3148 UDP-N-acetylglucosamine 1- carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase 1889918 8738202 Acfer_1706 Acidaminococcus fermentans DSM 20731 UDP-N-acetylglucosamine1- carboxyvinyltransferase YP_003399377.1 1888659 R 591001 CDS YP_003399378.1 284049039 8738203 complement(1889989..1890414) 1 NC_013740.1 KEGG: pla:Plav_1122 17 kDa surface antigen; hypothetical protein 1890414 8738203 Acfer_1707 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399378.1 1889989 R 591001 CDS YP_003399379.1 284049040 8738204 complement(1890559..1890750) 1 NC_013740.1 hypothetical protein 1890750 8738204 Acfer_1708 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399379.1 1890559 R 591001 CDS YP_003399380.1 284049041 8738205 complement(1890793..1891242) 1 NC_013740.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit- like; KEGG: pth:PTH_2811 F0F1 ATP synthase subunit epsilon; ATP synthase F1 subunit epsilon 1891242 8738205 Acfer_1709 Acidaminococcus fermentans DSM 20731 ATP synthase F1 subunit epsilon YP_003399380.1 1890793 R 591001 CDS YP_003399381.1 284049042 8738206 complement(1891239..1892714) 1 NC_013740.1 KEGG: mta:Moth_2378 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; ATP synthase F1 subunit beta 1892714 8738206 Acfer_1710 Acidaminococcus fermentans DSM 20731 ATP synthase F1 subunit beta YP_003399381.1 1891239 R 591001 CDS YP_003399382.1 284049043 8738207 complement(1892729..1893637) 1 NC_013740.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: hmo:HM1_1103 ATP synthase f1, gamma subunit; ATP synthase F1 subunit gamma 1893637 8738207 Acfer_1711 Acidaminococcus fermentans DSM 20731 ATP synthase F1 subunit gamma YP_003399382.1 1892729 R 591001 CDS YP_003399383.1 284049044 8738208 complement(1893653..1895509) 1 NC_013740.1 KEGG: mta:Moth_2380 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; H+transporting two- sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit alpha 1895509 8738208 Acfer_1712 Acidaminococcus fermentans DSM 20731 ATP synthase F1 subunit alpha YP_003399383.1 1893653 R 591001 CDS YP_003399384.1 284049045 8738209 complement(1895548..1896039) 1 NC_013740.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: slo:Shew_3849 F0F1 ATP synthase subunit B; ATP synthase F0 subunit B 1896039 8738209 Acfer_1713 Acidaminococcus fermentans DSM 20731 ATP synthase F0 subunit B YP_003399384.1 1895548 R 591001 CDS YP_003399385.1 284049046 8738210 complement(1896093..1896350) 1 NC_013740.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: lbu:LBUL_0638 F0F1 ATP synthase subunit C; ATP synthase F0 subunit C 1896350 8738210 Acfer_1714 Acidaminococcus fermentans DSM 20731 ATP synthase F0 subunit C YP_003399385.1 1896093 R 591001 CDS YP_003399386.1 284049047 8738211 complement(1896376..1897086) 1 NC_013740.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dae:Dtox_4171 ATP synthase F0, A subunit; ATP synthase F0 subunit A 1897086 8738211 Acfer_1715 Acidaminococcus fermentans DSM 20731 ATP synthase F0 subunit A YP_003399386.1 1896376 R 591001 CDS YP_003399387.1 284049048 8738212 complement(1897139..1897555) 1 NC_013740.1 hypothetical protein 1897555 8738212 Acfer_1716 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399387.1 1897139 R 591001 CDS YP_003399388.1 284049049 8738213 complement(1897562..1898728) 1 NC_013740.1 KEGG: drm:Dred_3159 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase 1898728 8738213 Acfer_1717 Acidaminococcus fermentans DSM 20731 UDP-N-acetylglucosamine 2-epimerase YP_003399388.1 1897562 R 591001 CDS YP_003399389.1 284049050 8738214 complement(1898746..1899759) 1 NC_013740.1 PFAM: glycosyl transferase, family 4, conserved region; KEGG: mta:Moth_0218 glycosyl transferase family protein; glycosyl transferase, family 4, conserved region 1899759 8738214 Acfer_1718 Acidaminococcus fermentans DSM 20731 glycosyl transferase, family 4, conserved region YP_003399389.1 1898746 R 591001 CDS YP_003399390.1 284049051 8738215 1899994..1900533 1 NC_013740.1 PFAM: Chromate transporter; KEGG: cpf:CPF_2509 chromate transport protein; chromate transporter 1900533 8738215 Acfer_1719 Acidaminococcus fermentans DSM 20731 chromate transporter YP_003399390.1 1899994 D 591001 CDS YP_003399391.1 284049052 8738216 1900533..1901105 1 NC_013740.1 PFAM: Chromate transporter; KEGG: aoe:Clos_2675 chromate transporter; chromate transporter 1901105 8738216 Acfer_1720 Acidaminococcus fermentans DSM 20731 chromate transporter YP_003399391.1 1900533 D 591001 CDS YP_003399392.1 284049053 8738217 complement(1901127..1902491) 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: dhd:Dhaf_2909 MATE efflux family protein; MATE efflux family protein 1902491 8738217 Acfer_1721 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003399392.1 1901127 R 591001 CDS YP_003399393.1 284049054 8738218 complement(1902546..1904576) 1 NC_013740.1 PFAM: sulfatase; KEGG: emi:Emin_0565 sulfatase; sulfatase 1904576 8738218 Acfer_1722 Acidaminococcus fermentans DSM 20731 sulfatase YP_003399393.1 1902546 R 591001 CDS YP_003399394.1 284049055 8738219 complement(1904588..1905532) 1 NC_013740.1 PFAM: diacylglycerol kinase catalytic region; KEGG: hau:Haur_1562 diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit 1905532 8738219 Acfer_1723 Acidaminococcus fermentans DSM 20731 diacylglycerol kinase catalytic subunit YP_003399394.1 1904588 R 591001 CDS YP_003399395.1 284049056 8738220 complement(1905561..1905959) 1 NC_013740.1 PFAM: GtrA family protein; KEGG: ele:Elen_1247 GtrA family protein; GtrA family protein 1905959 8738220 Acfer_1724 Acidaminococcus fermentans DSM 20731 GtrA family protein YP_003399395.1 1905561 R 591001 CDS YP_003399396.1 284049057 8738221 complement(1905961..1906206) 1 NC_013740.1 TIGRFAM: pro-sigmaK processing inhibitor BofA; PFAM: sigmaK-factor processing regulatory BofA; KEGG: cbf:CLI_0051 sigma-K factor processing regulatory protein BofA; pro-sigmaK processing inhibitor BofA 1906206 8738221 Acfer_1725 Acidaminococcus fermentans DSM 20731 pro-sigmaK processing inhibitor BofA YP_003399396.1 1905961 R 591001 CDS YP_003399397.1 284049058 8738222 complement(1906267..1906863) 1 NC_013740.1 KEGG: gka:GK0019 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein; recombination protein RecR 1906863 8738222 Acfer_1726 Acidaminococcus fermentans DSM 20731 recombination protein RecR YP_003399397.1 1906267 R 591001 CDS YP_003399398.1 284049059 8738223 complement(1906879..1907211) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: hmo:HM1_0810 hypothetical protein; hypothetical protein 1907211 8738223 Acfer_1727 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399398.1 1906879 R 591001 CDS YP_003399399.1 284049060 8738224 complement(1907248..1909263) 1 NC_013740.1 KEGG: syr:SynRCC307_0063 DNA polymerase III gamma/tau subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau 1909263 8738224 Acfer_1728 Acidaminococcus fermentans DSM 20731 DNA polymerase III subunits gamma and tau YP_003399399.1 1907248 R 591001 CDS YP_003399400.1 284049061 8738227 complement(1909805..1911205) 1 NC_013740.1 PFAM: FAD linked oxidase domain protein; KEGG: drm:Dred_0369 FAD linked oxidase domain- containing protein; FAD linked oxidase domain-containing protein 1911205 8738227 Acfer_1729 Acidaminococcus fermentans DSM 20731 FAD linked oxidase domain-containing protein YP_003399400.1 1909805 R 591001 CDS YP_003399401.1 284049062 8738229 complement(1911453..1911932) 1 NC_013740.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: amt:Amet_0026 CMP/dCMP deaminase, zinc- binding; CMP/dCMP deaminase zinc-binding protein 1911932 8738229 Acfer_1730 Acidaminococcus fermentans DSM 20731 CMP/dCMP deaminase zinc-binding protein YP_003399401.1 1911453 R 591001 CDS YP_003399402.1 284049063 8738230 complement(1912058..1912981) 1 NC_013740.1 KEGG: bha:BH2280 homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 1912981 8738230 Acfer_1731 Acidaminococcus fermentans DSM 20731 homoserine O-succinyltransferase YP_003399402.1 1912058 R 591001 CDS YP_003399403.1 284049064 8738231 1913387..1914049 1 NC_013740.1 PFAM: cyclic nucleotide-binding; KEGG: ccu:Ccur_01090 transcriptional regulator, crp family; CarD family transcriptional regulator 1914049 8738231 Acfer_1732 Acidaminococcus fermentans DSM 20731 CarD family transcriptional regulator YP_003399403.1 1913387 D 591001 CDS YP_003399404.1 284049065 8738232 1914125..1914784 1 NC_013740.1 KEGG: nme:NMB0698 hypothetical protein; hypothetical protein 1914784 8738232 Acfer_1733 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399404.1 1914125 D 591001 CDS YP_003399405.1 284049066 8738233 complement(1914922..1916013) 1 NC_013740.1 PFAM: metallophosphoesterase; KEGG: bcg:BCG9842_B4175 Ser/Thr protein phosphatase family protein; metallophosphoesterase 1916013 8738233 Acfer_1734 Acidaminococcus fermentans DSM 20731 metallophosphoesterase YP_003399405.1 1914922 R 591001 CDS YP_003399406.1 284049067 8738234 complement(1916029..1916421) 1 NC_013740.1 PFAM: Camphor resistance CrcB protein; KEGG: cyh:Cyan8802_1460 CrcB protein; camphor resistance protein CrcB 1916421 8738234 Acfer_1735 Acidaminococcus fermentans DSM 20731 camphor resistance protein CrcB YP_003399406.1 1916029 R 591001 CDS YP_003399407.1 284049068 8738235 1916688..1918064 1 NC_013740.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; Methyltransferase type 11; KEGG: sth:STH2818 RNA methyltransferase; RNA methyltransferase, TrmA family 1918064 8738235 Acfer_1736 Acidaminococcus fermentans DSM 20731 RNA methyltransferase, TrmA family YP_003399407.1 1916688 D 591001 CDS YP_003399408.1 284049069 8738236 1918432..1919994 1 NC_013740.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: cpr:CPR_0512 nitrite/sulfite reductase-like protein; nitrite and sulfite reductase 4Fe-4S region 1919994 8738236 Acfer_1737 Acidaminococcus fermentans DSM 20731 nitrite and sulfite reductase 4Fe-4S region YP_003399408.1 1918432 D 591001 CDS YP_003399409.1 284049070 8738237 1920245..1921186 1 NC_013740.1 KEGG: cby:CLM_0262 hypothetical protein; Hydrolase of the alpha/beta superfamily-like protein 1921186 8738237 Acfer_1738 Acidaminococcus fermentans DSM 20731 Hydrolase of the alpha/beta superfamily-like protein YP_003399409.1 1920245 D 591001 CDS YP_003399410.1 284049071 8738238 complement(1921274..1922194) 1 NC_013740.1 PFAM: Auxin Efflux Carrier; KEGG: cbi:CLJ_B2802 auxin efflux carrier family protein; auxin efflux carrier family protein 1922194 8738238 Acfer_1739 Acidaminococcus fermentans DSM 20731 auxin efflux carrier family protein YP_003399410.1 1921274 R 591001 CDS YP_003399411.1 284049072 8738239 complement(1922207..1923037) 1 NC_013740.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lla:L142816 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1923037 8738239 Acfer_1740 Acidaminococcus fermentans DSM 20731 short-chain dehydrogenase/reductase SDR YP_003399411.1 1922207 R 591001 CDS YP_003399412.1 284049073 8738240 complement(1923053..1923628) 1 NC_013740.1 PFAM: GCN5-related N-acetyltransferase; KEGG: shi:Shel_21300 sortase-like acyltransferase; N-acetyltransferase GCN5 1923628 8738240 Acfer_1741 Acidaminococcus fermentans DSM 20731 N-acetyltransferase GCN5 YP_003399412.1 1923053 R 591001 CDS YP_003399413.1 284049074 8738241 1923821..1924651 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dat:HRM2_43390 4Fe-4S iron-sulfur binding protein (ferredoxin); 4Fe-4S ferredoxin 1924651 8738241 Acfer_1742 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003399413.1 1923821 D 591001 CDS YP_003399414.1 284049075 8738242 complement(1924726..1925256) 1 NC_013740.1 PFAM: nitroreductase; KEGG: fnu:FN1223 dihydropteridine reductase; nitroreductase 1925256 8738242 Acfer_1743 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003399414.1 1924726 R 591001 CDS YP_003399415.1 284049076 8738243 1925426..1926325 1 NC_013740.1 hypothetical protein 1926325 8738243 Acfer_1744 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399415.1 1925426 D 591001 CDS YP_003399416.1 284049077 8738244 complement(1926449..1927669) 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: amt:Amet_3175 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1927669 8738244 Acfer_1745 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003399416.1 1926449 R 591001 CDS YP_003399417.1 284049078 8738245 complement(1927700..1928860) 1 NC_013740.1 PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; KEGG: chy:CHY_1290 UxaA family hydrolase; altronate dehydratase 1928860 8738245 Acfer_1746 Acidaminococcus fermentans DSM 20731 altronate dehydratase YP_003399417.1 1927700 R 591001 CDS YP_003399418.1 284049079 8738246 complement(1928873..1929175) 1 NC_013740.1 PFAM: SAF domain protein; KEGG: cdf:CD3003 carbohydrate hydrolase (N- terminus); SAF domain-containing protein 1929175 8738246 Acfer_1747 Acidaminococcus fermentans DSM 20731 SAF domain-containing protein YP_003399418.1 1928873 R 591001 CDS YP_003399419.1 284049080 8738247 1929301..1930233 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3221 LysR family transcriptional regulator; LysR family transcriptional regulator 1930233 8738247 Acfer_1748 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399419.1 1929301 D 591001 CDS YP_003399420.1 284049081 8738248 complement(1930308..1931789) 1 NC_013740.1 KEGG: fnu:FN1804 aminoacyl-histidine dipeptidase; TIGRFAM: aminoacyl-histidine dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; aminoacyl-histidine dipeptidase 1931789 8738248 Acfer_1749 Acidaminococcus fermentans DSM 20731 aminoacyl-histidine dipeptidase YP_003399420.1 1930308 R 591001 CDS YP_003399421.1 284049082 8738249 complement(1931802..1933211) 1 NC_013740.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: amt:Amet_0661 C4-dicarboxylate anaerobic carrier; C4-dicarboxylate anaerobic carrier-like protein 1933211 8738249 Acfer_1750 Acidaminococcus fermentans DSM 20731 C4-dicarboxylate anaerobic carrier-like protein YP_003399421.1 1931802 R 591001 CDS YP_003399422.1 284049083 8738250 complement(1933244..1933954) 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: fnu:FN1803 TetR family transcriptional regulator; transcriptional regulator, TetR family 1933954 8738250 Acfer_1751 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003399422.1 1933244 R 591001 CDS YP_003399423.1 284049084 8738251 1934121..1934960 1 NC_013740.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ote:Oter_0907 hypothetical protein; hypothetical protein 1934960 8738251 Acfer_1752 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399423.1 1934121 D 591001 CDS YP_003399424.1 284049085 8738252 complement(1934991..1935503) 1 NC_013740.1 PFAM: Helix-turn-helix type 11 domain protein; 3H domain protein; KEGG: esi:Exig_2103 3H domain-containing protein; helix-turn-helix type 11 domain-containing protein 1935503 8738252 Acfer_1753 Acidaminococcus fermentans DSM 20731 helix-turn-helix type 11 domain-containing protein YP_003399424.1 1934991 R 591001 CDS YP_003399425.1 284049086 8738253 complement(1935641..1936480) 1 NC_013740.1 KEGG: gbm:Gbem_0275 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase 1936480 8738253 Acfer_1754 Acidaminococcus fermentans DSM 20731 glutamate racemase YP_003399425.1 1935641 R 591001 CDS YP_003399426.1 284049087 8738254 1936761..1937096 1 NC_013740.1 KEGG: bha:BH3004 hypothetical protein; hypothetical protein 1937096 8738254 Acfer_1755 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399426.1 1936761 D 591001 CDS YP_003399427.1 284049088 8738255 complement(1937246..1938484) 1 NC_013740.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: fno:Fnod_1064 Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase 1938484 8738255 Acfer_1756 Acidaminococcus fermentans DSM 20731 Glu/Leu/Phe/Val dehydrogenase YP_003399427.1 1937246 R 591001 CDS YP_003399428.1 284049089 8738256 complement(1938677..1939885) 1 NC_013740.1 KEGG: nth:Nther_2075 hydrolase (HAD superfamily); hydrolase 1939885 8738256 Acfer_1757 Acidaminococcus fermentans DSM 20731 hydrolase YP_003399428.1 1938677 R 591001 CDS YP_003399429.1 284049090 8738257 complement(1939904..1940797) 1 NC_013740.1 PFAM: domain of unknown function DUF1730; KEGG: cdf:CD0563 putative iron-sulfur cluster protein; hypothetical protein 1940797 8738257 Acfer_1758 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399429.1 1939904 R 591001 CDS YP_003399430.1 284049091 8738258 complement(1940844..1942154) 1 NC_013740.1 KEGG: rbi:RB2501_15429 putative acylhydrolase; hypothetical protein 1942154 8738258 Acfer_1759 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399430.1 1940844 R 591001 CDS YP_003399431.1 284049092 8738259 complement(1942292..1943740) 1 NC_013740.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; GatB central domain protein; Asn/Gln amidotransferase; KEGG: drm:Dred_2340 aspartyl/glutamyl-tRNA amidotransferase subunit B; glutamyl-tRNA(Gln) amidotransferase subunit B 1943740 8738259 Acfer_1760 Acidaminococcus fermentans DSM 20731 glutamyl-tRNA(Gln) amidotransferase subunit B YP_003399431.1 1942292 R 591001 CDS YP_003399432.1 284049093 8738260 complement(1943740..1945206) 1 NC_013740.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; KEGG: dae:Dtox_0765 glutamyl-tRNA(Gln) amidotransferase, A subunit; glutamyl-tRNA(Gln) amidotransferase subunit A 1945206 8738260 Acfer_1761 Acidaminococcus fermentans DSM 20731 glutamyl-tRNA(Gln) amidotransferase subunit A YP_003399432.1 1943740 R 591001 CDS YP_003399433.1 284049094 8738261 complement(1945221..1945508) 1 NC_013740.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: pjd:Pjdr2_1089 glutamyl-tRNA(Gln) amidotransferase, C subunit; glutamyl-tRNA(Gln) amidotransferase subunit C 1945508 8738261 Acfer_1762 Acidaminococcus fermentans DSM 20731 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003399433.1 1945221 R 591001 CDS YP_003399434.1 284049095 8738262 1945743..1946882 1 NC_013740.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: cth:Cthe_2799 cystathionine gamma-synthase; cystathionine gamma-synthase 1946882 8738262 Acfer_1763 Acidaminococcus fermentans DSM 20731 cystathionine gamma-synthase YP_003399434.1 1945743 D 591001 CDS YP_003399435.1 284049096 8738263 complement(1946917..1947987) 1 NC_013740.1 KEGG: cce:Ccel_2567 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase 1947987 8738263 Acfer_1764 Acidaminococcus fermentans DSM 20731 tartrate dehydrogenase YP_003399435.1 1946917 R 591001 CDS YP_003399436.1 284049097 8738264 1948146..1949045 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: afr:AFE_0037 LysR family transcriptional regulator; LysR family transcriptional regulator 1949045 8738264 Acfer_1765 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399436.1 1948146 D 591001 CDS YP_003399437.1 284049098 8738265 complement(1949084..1949593) 1 NC_013740.1 hypothetical protein 1949593 8738265 Acfer_1766 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399437.1 1949084 R 591001 CDS YP_003399438.1 284049099 8738266 complement(1949615..1951060) 1 NC_013740.1 PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein; hypothetical protein 1951060 8738266 Acfer_1767 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399438.1 1949615 R 591001 CDS YP_003399439.1 284049100 8738268 complement(1952215..1953237) 1 NC_013740.1 hypothetical protein 1953237 8738268 Acfer_1769 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399439.1 1952215 R 591001 CDS YP_003399440.1 284049101 8738269 complement(1953234..1954952) 1 NC_013740.1 KEGG: spe:Spro_4077 filamentous haemagglutinin outer membrane protein; hypothetical protein 1954952 8738269 Acfer_1770 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399440.1 1953234 R 591001 CDS YP_003399441.1 284049102 8738271 complement(1957420..1957893) 1 NC_013740.1 KEGG: dae:Dtox_0153 hypothetical protein; hypothetical protein 1957893 8738271 Acfer_1772 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399441.1 1957420 R 591001 CDS YP_003399442.1 284049103 8738272 complement(1957896..1959467) 1 NC_013740.1 PFAM: protein of unknown function DUF637 hemagglutinin putative; KEGG: spe:Spro_4402 filamentous haemagglutinin outer membrane protein; hypothetical protein 1959467 8738272 Acfer_1773 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399442.1 1957896 R 591001 CDS YP_003399443.1 284049104 8738273 complement(1959682..1960437) 1 NC_013740.1 PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: sth:STH274 IS21 family transposase; IstB domain-containing protein ATP-binding protein 1960437 8738273 Acfer_1774 Acidaminococcus fermentans DSM 20731 IstB domain-containing protein ATP-binding protein YP_003399443.1 1959682 R 591001 CDS YP_003399444.1 284049105 8738274 complement(1960419..1961849) 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: gtn:GTNG_3485 transposase; integrase catalytic subunit 1961849 8738274 Acfer_1775 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003399444.1 1960419 R 591001 CDS YP_003399445.1 284049106 8738275 complement(1962322..1966998) 1 NC_013740.1 TIGRFAM: adhesin HecA family; PFAM: protein of unknown function DUF637 hemagglutinin putative; Haemagluttinin repeat-containing protein; KEGG: plu:plu1149 hypothetical protein; adhesin HecA family 1966998 8738275 Acfer_1776 Acidaminococcus fermentans DSM 20731 adhesin HecA family YP_003399445.1 1962322 R 591001 CDS YP_003399446.1 284049107 8738276 complement(1967024..1969552) 1 NC_013740.1 TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: cvi:CV_2872 hemagglutinin; filamentous hemagglutinin family outer membrane protein 1969552 8738276 Acfer_1777 Acidaminococcus fermentans DSM 20731 filamentous hemagglutinin family outer membrane protein YP_003399446.1 1967024 R 591001 CDS YP_003399447.1 284049108 8738277 complement(1969579..1971267) 1 NC_013740.1 PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rme:Rmet_5340 TonB box-like protein; Polypeptide-transport-associated domain protein ShlB-type 1971267 8738277 Acfer_1778 Acidaminococcus fermentans DSM 20731 Polypeptide-transport-associated domain protein ShlB-type YP_003399447.1 1969579 R 591001 CDS YP_003399448.1 284049109 8738278 complement(1971823..1973883) 1 NC_013740.1 KEGG: hmo:HM1_2458 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1973883 8738278 Acfer_1779 Acidaminococcus fermentans DSM 20731 glycyl-tRNA synthetase subunit beta YP_003399448.1 1971823 R 591001 CDS YP_003399449.1 284049110 8738279 complement(1973889..1974761) 1 NC_013740.1 KEGG: pjd:Pjdr2_2239 glycyl-tRNA synthetase, alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase, alpha subunit 1974761 8738279 Acfer_1780 Acidaminococcus fermentans DSM 20731 glycyl-tRNA synthetase, alpha subunit YP_003399449.1 1973889 R 591001 CDS YP_003399450.1 284049111 8738281 complement(1975098..1976867) 1 NC_013740.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; KEGG: hmo:HM1_1995 RNA polymerase sigma factor RpoD; RpoD subfamily RNA polymerase sigma-70 subunit 1976867 8738281 Acfer_1781 Acidaminococcus fermentans DSM 20731 RpoD subfamily RNA polymerase sigma-70 subunit YP_003399450.1 1975098 R 591001 CDS YP_003399451.1 284049112 8738282 complement(1976919..1978730) 1 NC_013740.1 KEGG: pth:PTH_0906 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; SMART: zinc finger CHC2-family protein; Toprim sub domain protein; DNA primase 1978730 8738282 Acfer_1782 Acidaminococcus fermentans DSM 20731 DNA primase YP_003399451.1 1976919 R 591001 CDS YP_003399452.1 284049113 8738283 complement(1978829..1979650) 1 NC_013740.1 PFAM: protein of unknown function DUF299; KEGG: nth:Nther_1210 protein of unknown function DUF299; hypothetical protein 1979650 8738283 Acfer_1783 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399452.1 1978829 R 591001 CDS YP_003399453.1 284049114 8738284 complement(1979643..1980308) 1 NC_013740.1 PFAM: hypothetical protein; Helix-turn- helix type 11 domain protein; KEGG: pth:PTH_0901 transcriptional regulator; hypothetical protein 1980308 8738284 Acfer_1784 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399453.1 1979643 R 591001 CDS YP_003399454.1 284049115 8738285 complement(1980414..1982804) 1 NC_013740.1 TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein; KEGG: lpl:lp_1912 phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 1982804 8738285 Acfer_1785 Acidaminococcus fermentans DSM 20731 phosphoenolpyruvate synthase YP_003399454.1 1980414 R 591001 CDS YP_003399455.1 284049116 8738286 complement(1983089..1983655) 1 NC_013740.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: pdi:BDI_2172 putative flavoredoxin; flavin reductase domain-containing FMN-binding protein 1983655 8738286 Acfer_1786 Acidaminococcus fermentans DSM 20731 flavin reductase domain-containing FMN-binding protein YP_003399455.1 1983089 R 591001 CDS YP_003399456.1 284049117 8738287 complement(1983694..1984659) 1 NC_013740.1 PFAM: transport system permease protein; KEGG: cce:Ccel_3203 transport system permease protein; transport system permease 1984659 8738287 Acfer_1787 Acidaminococcus fermentans DSM 20731 transport system permease YP_003399456.1 1983694 R 591001 CDS YP_003399457.1 284049118 8738291 complement(1985234..1985980) 1 NC_013740.1 PFAM: metallophosphoesterase; KEGG: cdf:CD0346 putative phosphoesterase; metallophosphoesterase 1985980 8738291 Acfer_1788 Acidaminococcus fermentans DSM 20731 metallophosphoesterase YP_003399457.1 1985234 R 591001 CDS YP_003399458.1 284049119 8738292 complement(1986011..1986235) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: tex:Teth514_2248 hypothetical protein; hypothetical protein 1986235 8738292 Acfer_1789 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399458.1 1986011 R 591001 CDS YP_003399459.1 284049120 8738293 complement(1986291..1987418) 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ckr:CKR_1424 hypothetical protein; 4Fe-4S ferredoxin 1987418 8738293 Acfer_1790 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003399459.1 1986291 R 591001 CDS YP_003399460.1 284049121 8738294 complement(1987468..1987950) 1 NC_013740.1 PFAM: protein of unknown function DUF163; KEGG: cpy:Cphy_0910 hypothetical protein; hypothetical protein 1987950 8738294 Acfer_1791 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399460.1 1987468 R 591001 CDS YP_003399461.1 284049122 8738295 complement(1987947..1989077) 1 NC_013740.1 KEGG: chy:CHY_0057 putative serine protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; HtrA2 peptidase 1989077 8738295 Acfer_1792 Acidaminococcus fermentans DSM 20731 HtrA2 peptidase YP_003399461.1 1987947 R 591001 CDS YP_003399462.1 284049123 8738296 complement(1989092..1989877) 1 NC_013740.1 KEGG: swo:Swol_2443 hypothetical protein; hypothetical protein 1989877 8738296 Acfer_1793 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399462.1 1989092 R 591001 CDS YP_003399463.1 284049124 8738297 complement(1990011..1990454) 1 NC_013740.1 PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator, Fur family 1990454 8738297 Acfer_1794 Acidaminococcus fermentans DSM 20731 ferric uptake regulator, Fur family YP_003399463.1 1990011 R 591001 CDS YP_003399464.1 284049125 8738298 complement(1990733..1991458) 1 NC_013740.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: bfs:BF0621 putative ErfK/YbiS/YcfS/YnhG family protein; ErfK/YbiS/YcfS/YnhG family protein 1991458 8738298 Acfer_1795 Acidaminococcus fermentans DSM 20731 ErfK/YbiS/YcfS/YnhG family protein YP_003399464.1 1990733 R 591001 CDS YP_003399465.1 284049126 8738299 1991859..1992557 1 NC_013740.1 TIGRFAM: serine O-acetyltransferase; KEGG: dae:Dtox_0264 serine O-acetyltransferase; serine O-acetyltransferase 1992557 8738299 Acfer_1796 Acidaminococcus fermentans DSM 20731 serine O-acetyltransferase YP_003399465.1 1991859 D 591001 CDS YP_003399466.1 284049127 8738300 1992763..1993704 1 NC_013740.1 TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cce:Ccel_3186 cysteine synthase A; cysteine synthase A 1993704 8738300 Acfer_1797 Acidaminococcus fermentans DSM 20731 cysteine synthase A YP_003399466.1 1992763 D 591001 CDS YP_003399467.1 284049128 8738301 complement(1993802..1994710) 1 NC_013740.1 KEGG: cac:CA_P0014 protein tyrosine phosphatase II superfamily protein; protein tyrosine phosphatase II superfamily protein 1994710 8738301 Acfer_1798 Acidaminococcus fermentans DSM 20731 protein tyrosine phosphatase II superfamily protein YP_003399467.1 1993802 R 591001 CDS YP_003399468.1 284049129 8738302 complement(1994786..1995553) 1 NC_013740.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: shi:Shel_16040 HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 1995553 8738302 Acfer_1799 Acidaminococcus fermentans DSM 20731 HAD-superfamily hydrolase YP_003399468.1 1994786 R 591001 CDS YP_003399469.1 284049130 8738303 1995744..1996148 1 NC_013740.1 KEGG: Ep400; E1A binding protein p400 ; K11320 E1A- binding protein p400; hypothetical protein 1996148 8738303 Acfer_1800 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399469.1 1995744 D 591001 CDS YP_003399470.1 284049131 8738304 1996410..1997885 1 NC_013740.1 PFAM: sodium:neurotransmitter symporter; KEGG: eel:EUBELI_01705 neurotransmitter:Na+ symporter, NSS family; sodium:neurotransmitter symporter 1997885 8738304 Acfer_1801 Acidaminococcus fermentans DSM 20731 sodium:neurotransmitter symporter YP_003399470.1 1996410 D 591001 CDS YP_003399471.1 284049132 8738305 1998015..1999496 1 NC_013740.1 PFAM: sodium:neurotransmitter symporter; KEGG: eel:EUBELI_01705 neurotransmitter:Na+ symporter, NSS family; sodium:neurotransmitter symporter 1999496 8738305 Acfer_1802 Acidaminococcus fermentans DSM 20731 sodium:neurotransmitter symporter YP_003399471.1 1998015 D 591001 CDS YP_003399472.1 284049133 8738306 complement(1999597..2000349) 1 NC_013740.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cdf:CD0474 putative iron-sulfur protein; 4Fe-4S ferredoxin 2000349 8738306 Acfer_1803 Acidaminococcus fermentans DSM 20731 4Fe-4S ferredoxin YP_003399472.1 1999597 R 591001 CDS YP_003399473.1 284049134 8738307 complement(2000387..2000773) 1 NC_013740.1 PFAM: thioesterase superfamily protein; KEGG: zmo:ZMO0511 acyl-CoA hydrolase; thioesterase superfamily protein 2000773 8738307 Acfer_1804 Acidaminococcus fermentans DSM 20731 thioesterase superfamily protein YP_003399473.1 2000387 R 591001 CDS YP_003399474.1 284049135 8738308 complement(2000770..2001363) 1 NC_013740.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cdf:CD1576 putative arylesterase; G-D-S-L family lipolytic protein 2001363 8738308 Acfer_1805 Acidaminococcus fermentans DSM 20731 G-D-S-L family lipolytic protein YP_003399474.1 2000770 R 591001 CDS YP_003399475.1 284049136 8738309 complement(2001377..2002585) 1 NC_013740.1 KEGG: nis:NIS_1768 N-acetyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2002585 8738309 Acfer_1806 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399475.1 2001377 R 591001 CDS YP_003399476.1 284049137 8738310 complement(2002908..2003441) 1 NC_013740.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: cpy:Cphy_3048 anaerobic ribonucleoside- triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 2003441 8738310 Acfer_1807 Acidaminococcus fermentans DSM 20731 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003399476.1 2002908 R 591001 CDS YP_003399477.1 284049138 8738311 complement(2003454..2005580) 1 NC_013740.1 KEGG: cpy:Cphy_3050 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; formate C- acetyltransferase glycine radical; anaerobic ribonucleoside-triphosphate reductase 2005580 8738311 Acfer_1808 Acidaminococcus fermentans DSM 20731 anaerobic ribonucleoside-triphosphate reductase YP_003399477.1 2003454 R 591001 CDS YP_003399478.1 284049139 8738312 complement(2005950..2007140) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ctc:CTC02464 amidohydrolase; amidohydrolase 2007140 8738312 Acfer_1809 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399478.1 2005950 R 591001 CDS YP_003399479.1 284049140 8738313 complement(2007222..2008640) 1 NC_013740.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: ctc:CTC02465 transporter; C4-dicarboxylate anaerobic carrier-like protein 2008640 8738313 Acfer_1810 Acidaminococcus fermentans DSM 20731 C4-dicarboxylate anaerobic carrier-like protein YP_003399479.1 2007222 R 591001 CDS YP_003399480.1 284049141 8738314 2008823..2009746 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eel:EUBELI_20469 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator 2009746 8738314 Acfer_1811 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399480.1 2008823 D 591001 CDS YP_003399481.1 284049142 8738315 2009759..2011093 1 NC_013740.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: acl:ACL_0506 acetyl-CoA hydrolase; acetyl-CoA hydrolase/transferase 2011093 8738315 Acfer_1812 Acidaminococcus fermentans DSM 20731 acetyl-CoA hydrolase/transferase YP_003399481.1 2009759 D 591001 CDS YP_003399482.1 284049143 8738316 complement(2011244..2012821) 1 NC_013740.1 PFAM: transposase IS4 family protein; KEGG: dsy:DSY1297 hypothetical protein; transposase IS4 family protein 2012821 8738316 Acfer_1813 Acidaminococcus fermentans DSM 20731 transposase IS4 family protein YP_003399482.1 2011244 R 591001 CDS YP_003399483.1 284049144 8738317 complement(2013000..2014139) 1 NC_013740.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: fnu:FN0208 (R)-2-hydroxyglutaryl-CoA dehydratase beta-subunit; Benzoyl-CoA reductase 2014139 8738317 Acfer_1814 Acidaminococcus fermentans DSM 20731 Benzoyl-CoA reductase YP_003399483.1 2013000 R 591001 CDS YP_003399484.1 284049145 8738318 complement(2014142..2015575) 1 NC_013740.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: fnu:FN0207 (R)-2-hydroxyglutaryl-CoA dehydratase alpha-subunit; 2-hydroxyglutaryl-CoA dehydratase subunit D 2015575 8738318 Acfer_1815 Acidaminococcus fermentans DSM 20731 2-hydroxyglutaryl-CoA dehydratase subunit D YP_003399484.1 2014142 R 591001 CDS YP_003399485.1 284049146 8738319 complement(2015608..2016390) 1 NC_013740.1 KEGG: fnu:FN0206 (R)-2-hydroxyglutaryl-CoA dehydratase activator protein; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 2016390 8738319 Acfer_1816 Acidaminococcus fermentans DSM 20731 CoA-substrate-specific enzyme activase YP_003399485.1 2015608 R 591001 CDS YP_003399486.1 284049147 8738320 complement(2016413..2018176) 1 NC_013740.1 PFAM: carboxyl transferase; KEGG: fnu:FN0204 glutaconyl-CoA decarboxylase A subunit; carboxyl transferase 2018176 8738320 Acfer_1817 Acidaminococcus fermentans DSM 20731 carboxyl transferase YP_003399486.1 2016413 R 591001 CDS YP_003399487.1 284049148 8738321 complement(2018200..2019000) 1 NC_013740.1 PFAM: coenzyme A transferase; SMART: coenzyme A transferase; KEGG: fnu:FN0203 glutaconate CoA-transferase subunit B; coenzyme A transferase 2019000 8738321 Acfer_1818 Acidaminococcus fermentans DSM 20731 coenzyme A transferase YP_003399487.1 2018200 R 591001 CDS YP_003399488.1 284049149 8738322 complement(2019003..2019965) 1 NC_013740.1 PFAM: coenzyme A transferase; KEGG: fnu:FN0202 glutaconate CoA-transferase subunit A; coenzyme A transferase 2019965 8738322 Acfer_1819 Acidaminococcus fermentans DSM 20731 coenzyme A transferase YP_003399488.1 2019003 R 591001 CDS YP_003399489.1 284049150 8738323 complement(2020289..2021734) 1 NC_013740.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: dau:Daud_0478 metal dependent phosphohydrolase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 2021734 8738323 Acfer_1820 Acidaminococcus fermentans DSM 20731 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_003399489.1 2020289 R 591001 CDS YP_003399490.1 284049151 8738324 complement(2021731..2023161) 1 NC_013740.1 KEGG: pth:PTH_0829 ribonucleases G and E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 2023161 8738324 Acfer_1821 Acidaminococcus fermentans DSM 20731 ribonuclease, Rne/Rng family YP_003399490.1 2021731 R 591001 CDS YP_003399491.1 284049152 8738325 complement(2023172..2023864) 1 NC_013740.1 PFAM: Protein of unknown function DUF2344; KEGG: dhd:Dhaf_4340 radical sam protein, putative; hypothetical protein 2023864 8738325 Acfer_1822 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399491.1 2023172 R 591001 CDS YP_003399492.1 284049153 8738326 complement(2023861..2025723) 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cth:Cthe_0156 radical SAM family protein; radical SAM protein 2025723 8738326 Acfer_1823 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399492.1 2023861 R 591001 CDS YP_003399493.1 284049154 8738327 complement(2025733..2026854) 1 NC_013740.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: dae:Dtox_3332 rod shape-determining protein RodA; rod shape-determining protein RodA 2026854 8738327 Acfer_1824 Acidaminococcus fermentans DSM 20731 rod shape-determining protein RodA YP_003399493.1 2025733 R 591001 CDS YP_003399494.1 284049155 8738328 complement(2026864..2028660) 1 NC_013740.1 KEGG: geo:Geob_3477 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 2028660 8738328 Acfer_1825 Acidaminococcus fermentans DSM 20731 penicillin-binding protein 2 YP_003399494.1 2026864 R 591001 CDS YP_003399495.1 284049156 8738329 complement(2028670..2029182) 1 NC_013740.1 TIGRFAM: rod shape-determining protein MreD; KEGG: dae:Dtox_3337 rod shape-determining protein MreD; rod shape-determining protein MreD 2029182 8738329 Acfer_1826 Acidaminococcus fermentans DSM 20731 rod shape-determining protein MreD YP_003399495.1 2028670 R 591001 CDS YP_003399496.1 284049157 8738330 complement(2029182..2030066) 1 NC_013740.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: nth:Nther_0516 rod shape-determining protein MreC; rod shape-determining protein MreC 2030066 8738330 Acfer_1827 Acidaminococcus fermentans DSM 20731 rod shape-determining protein MreC YP_003399496.1 2029182 R 591001 CDS YP_003399497.1 284049158 8738331 complement(2030085..2031116) 1 NC_013740.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; KEGG: sth:STH372 rod shape-determining protein MreB; MreB/Mrl family cell shape determining protein 2031116 8738331 Acfer_1828 Acidaminococcus fermentans DSM 20731 MreB/Mrl family cell shape determining protein YP_003399497.1 2030085 R 591001 CDS YP_003399498.1 284049159 8738332 complement(2031132..2031794) 1 NC_013740.1 TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; helix-hairpin-helix motif; KEGG: gtn:GTNG_2548 DNA repair protein RadC; DNA repair protein RadC 2031794 8738332 Acfer_1829 Acidaminococcus fermentans DSM 20731 DNA repair protein RadC YP_003399498.1 2031132 R 591001 CDS YP_003399499.1 284049160 8738333 complement(2031745..2032380) 1 NC_013740.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: sth:STH370 septum formation protein Maf; maf protein 2032380 8738333 Acfer_1830 Acidaminococcus fermentans DSM 20731 maf protein YP_003399499.1 2031745 R 591001 CDS YP_003399500.1 284049161 8738334 complement(2032390..2032653) 1 NC_013740.1 KEGG: cac:CAC1239 hypothetical protein; hypothetical protein 2032653 8738334 Acfer_1831 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399500.1 2032390 R 591001 CDS YP_003399501.1 284049162 8738335 complement(2032657..2033094) 1 NC_013740.1 KEGG: dat:HRM2_32050 SigE; hypothetical protein 2033094 8738335 Acfer_1832 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399501.1 2032657 R 591001 CDS YP_003399502.1 284049163 8738336 complement(2033110..2033607) 1 NC_013740.1 hypothetical protein 2033607 8738336 Acfer_1833 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399502.1 2033110 R 591001 CDS YP_003399503.1 284049164 8738337 complement(2033747..2034874) 1 NC_013740.1 KEGG: aoe:Clos_0443 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl- CoA/oxaloacetate decarboxylase beta subunit; sodium ion-translocating decarboxylase subunit beta 2034874 8738337 Acfer_1834 Acidaminococcus fermentans DSM 20731 sodium ion-translocating decarboxylase subunit beta YP_003399503.1 2033747 R 591001 CDS YP_003399504.1 284049165 8738338 complement(2034910..2035347) 1 NC_013740.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: pth:PTH_1366 methylmalonyl-CoA decarboxylase, gamma subunit; biotin/lipoyl attachment domain-containing protein 2035347 8738338 Acfer_1835 Acidaminococcus fermentans DSM 20731 biotin/lipoyl attachment domain-containing protein YP_003399504.1 2034910 R 591001 CDS YP_003399505.1 284049166 8738339 complement(2035418..2035741) 1 NC_013740.1 TIGRFAM: sodium pump decarboxylase, gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; sodium pump decarboxylase, gamma subunit 2035741 8738339 Acfer_1836 Acidaminococcus fermentans DSM 20731 sodium pump decarboxylase, gamma subunit YP_003399505.1 2035418 R 591001 CDS YP_003399506.1 284049167 8738340 complement(2035788..2037314) 1 NC_013740.1 PFAM: carboxyl transferase; KEGG: tte:TTE1220 acetyl-CoA carboxylase alpha subunit; carboxyl transferase 2037314 8738340 Acfer_1837 Acidaminococcus fermentans DSM 20731 carboxyl transferase YP_003399506.1 2035788 R 591001 CDS YP_003399507.1 284049168 8738341 complement(2037430..2038953) 1 NC_013740.1 KEGG: aoe:Clos_0435 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 2038953 8738341 Acfer_1838 Acidaminococcus fermentans DSM 20731 succinate CoA transferase YP_003399507.1 2037430 R 591001 CDS YP_003399508.1 284049169 8738342 complement(2039130..2040431) 1 NC_013740.1 PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tex:Teth514_2145 Fe-S cluster domain- containing protein; Fe-S cluster domain-containing protein 2040431 8738342 Acfer_1839 Acidaminococcus fermentans DSM 20731 Fe-S cluster domain-containing protein YP_003399508.1 2039130 R 591001 CDS YP_003399509.1 284049170 8738343 complement(2040461..2040877) 1 NC_013740.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0761 anti-sigma regulatory factor; putative anti-sigma regulatory factor 2040877 8738343 Acfer_1840 Acidaminococcus fermentans DSM 20731 putative anti-sigma regulatory factor YP_003399509.1 2040461 R 591001 CDS YP_003399510.1 284049171 8738344 complement(2040884..2041246) 1 NC_013740.1 PFAM: DRTGG domain protein; KEGG: cpy:Cphy_3800 DRTGG domain-containing protein; DRTGG domain-containing protein 2041246 8738344 Acfer_1841 Acidaminococcus fermentans DSM 20731 DRTGG domain-containing protein YP_003399510.1 2040884 R 591001 CDS YP_003399511.1 284049172 8738345 complement(2041267..2043426) 1 NC_013740.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: ctc:CTC02319 serine/threonine kinase, putative regulatory protein; hypothetical protein 2043426 8738345 Acfer_1842 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399511.1 2041267 R 591001 CDS YP_003399512.1 284049173 8738346 complement(2043474..2044304) 1 NC_013740.1 PFAM: transcriptional activator domain; Pentatricopeptide repeat-containing protein; KEGG: sgo:SGO_1814 putative regulatory protein; SARP family transcriptional regulator 2044304 8738346 Acfer_1843 Acidaminococcus fermentans DSM 20731 SARP family transcriptional regulator YP_003399512.1 2043474 R 591001 CDS YP_003399513.1 284049174 8738347 complement(2044462..2045703) 1 NC_013740.1 TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; KEGG: ctc:CTC02320 imidazolonepropionase; imidazolonepropionase 2045703 8738347 Acfer_1844 Acidaminococcus fermentans DSM 20731 imidazolonepropionase YP_003399513.1 2044462 R 591001 CDS YP_003399514.1 284049175 8738348 complement(2045788..2047839) 1 NC_013740.1 KEGG: ctc:CTC02321 urocanate hydratase; TIGRFAM: urocanate hydratase; PFAM: Urocanase; urocanate hydratase 2047839 8738348 Acfer_1845 Acidaminococcus fermentans DSM 20731 urocanate hydratase YP_003399514.1 2045788 R 591001 CDS YP_003399515.1 284049176 8738349 complement(2048272..2049381) 1 NC_013740.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dps:DP2376 biotin synthase; radical SAM protein 2049381 8738349 Acfer_1846 Acidaminococcus fermentans DSM 20731 radical SAM protein YP_003399515.1 2048272 R 591001 CDS YP_003399516.1 284049177 8738350 complement(2049395..2050771) 1 NC_013740.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: msi:Msm_0152 Na(+)-driven multidrug efflux pump NorM; MATE efflux family protein 2050771 8738350 Acfer_1847 Acidaminococcus fermentans DSM 20731 MATE efflux family protein YP_003399516.1 2049395 R 591001 CDS YP_003399517.1 284049178 8738351 complement(2050818..2052122) 1 NC_013740.1 PFAM: amino acid permease-associated region; KEGG: cdf:CD3092 putative amino acid permease; amino acid permease 2052122 8738351 Acfer_1848 Acidaminococcus fermentans DSM 20731 amino acid permease YP_003399517.1 2050818 R 591001 CDS YP_003399518.1 284049179 8738352 complement(2052124..2052825) 1 NC_013740.1 PFAM: peptidase C26; KEGG: lac:LBA1903 glutamine amidotransferase; peptidase C26 2052825 8738352 Acfer_1849 Acidaminococcus fermentans DSM 20731 peptidase C26 YP_003399518.1 2052124 R 591001 CDS YP_003399519.1 284049180 8738353 complement(2052890..2055307) 1 NC_013740.1 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12- binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: aoe:Clos_0080 homocysteine S- methyltransferase; homocysteine S-methyltransferase 2055307 8738353 Acfer_1850 Acidaminococcus fermentans DSM 20731 homocysteine S-methyltransferase YP_003399519.1 2052890 R 591001 CDS YP_003399520.1 284049181 8738354 complement(2055304..2056005) 1 NC_013740.1 PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: cdf:CD3597 hypothetical protein; Vitamin B12 dependent methionine synthase activation subunit 2056005 8738354 Acfer_1851 Acidaminococcus fermentans DSM 20731 Vitamin B12 dependent methionine synthase activation subunit YP_003399520.1 2055304 R 591001 CDS YP_003399521.1 284049182 8738355 complement(2056019..2056882) 1 NC_013740.1 PFAM: methylenetetrahydrofolate reductase; KEGG: ank:AnaeK_2769 5,10-methylenetetrahydrofolate reductase; Methylenetetrahydrofolate reductase (NAD(P)H) 2056882 8738355 Acfer_1852 Acidaminococcus fermentans DSM 20731 Methylenetetrahydrofolate reductase (NAD(P)H) YP_003399521.1 2056019 R 591001 CDS YP_003399522.1 284049183 8738356 complement(2056977..2058383) 1 NC_013740.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: cbb:CLD_2591 GntR family transcriptional regulator; GntR family transcriptional regulator 2058383 8738356 Acfer_1853 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003399522.1 2056977 R 591001 CDS YP_003399523.1 284049184 8738357 2058611..2059372 1 NC_013740.1 PFAM: AzlC family protein; KEGG: bsu:BSU26710 branched-chain amino acid transporter; AzlC family protein 2059372 8738357 Acfer_1854 Acidaminococcus fermentans DSM 20731 AzlC family protein YP_003399523.1 2058611 D 591001 CDS YP_003399524.1 284049185 8738358 2059369..2059701 1 NC_013740.1 PFAM: branched-chain amino acid transport; KEGG: bsu:BSU26700 branched-chain amino acid transporter; branched-chain amino acid transport 2059701 8738358 Acfer_1855 Acidaminococcus fermentans DSM 20731 branched-chain amino acid transport YP_003399524.1 2059369 D 591001 CDS YP_003399525.1 284049186 8738359 complement(2059900..2060451) 1 NC_013740.1 PFAM: phosphoribosyltransferase; KEGG: dps:DP1516 adenine phosphoribosyltransferase; phosphoribosyltransferase 2060451 8738359 Acfer_1856 Acidaminococcus fermentans DSM 20731 phosphoribosyltransferase YP_003399525.1 2059900 R 591001 CDS YP_003399526.1 284049187 8738360 complement(2060598..2060906) 1 NC_013740.1 hypothetical protein 2060906 8738360 Acfer_1857 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399526.1 2060598 R 591001 CDS YP_003399527.1 284049188 8738361 complement(2060965..2063073) 1 NC_013740.1 PFAM: Polyphosphate kinase; KEGG: hmo:HM1_0232 polyphosphate kinase; polyphosphate kinase 2063073 8738361 Acfer_1858 Acidaminococcus fermentans DSM 20731 polyphosphate kinase YP_003399527.1 2060965 R 591001 CDS YP_003399528.1 284049189 8738362 complement(2063073..2064632) 1 NC_013740.1 PFAM: Ppx/GppA phosphatase; KEGG: pmo:Pmob_0465 exopolyphosphatase-like protein; Ppx/GppA phosphatase 2064632 8738362 Acfer_1859 Acidaminococcus fermentans DSM 20731 Ppx/GppA phosphatase YP_003399528.1 2063073 R 591001 CDS YP_003399529.1 284049190 8738363 2064787..2066316 1 NC_013740.1 PFAM: Ppx/GppA phosphatase; KEGG: drm:Dred_1179 Ppx/GppA phosphatase; Ppx/GppA phosphatase 2066316 8738363 Acfer_1860 Acidaminococcus fermentans DSM 20731 Ppx/GppA phosphatase YP_003399529.1 2064787 D 591001 CDS YP_003399530.1 284049191 8738364 complement(2066584..2068179) 1 NC_013740.1 KEGG: cpi:Cpin_2966 hypothetical protein; hypothetical protein 2068179 8738364 Acfer_1861 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399530.1 2066584 R 591001 CDS YP_003399531.1 284049192 8738365 complement(2068370..2070277) 1 NC_013740.1 KEGG: aoe:Clos_2310 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 FtsH extracellular; peptidase M41; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH 2070277 8738365 Acfer_1862 Acidaminococcus fermentans DSM 20731 ATP-dependent metalloprotease FtsH YP_003399531.1 2068370 R 591001 CDS YP_003399532.1 284049193 8738366 2070538..2072085 1 NC_013740.1 PFAM: AbgT putative transporter; KEGG: tde:TDE2328 efflux pump component MtrF; AbgT transporter 2072085 8738366 Acfer_1863 Acidaminococcus fermentans DSM 20731 AbgT transporter YP_003399532.1 2070538 D 591001 CDS YP_003399533.1 284049194 8738372 complement(2077971..2079029) 1 NC_013740.1 KEGG: sth:STH1727 A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase 2079029 8738372 Acfer_1864 Acidaminococcus fermentans DSM 20731 A/G-specific adenine glycosylase YP_003399533.1 2077971 R 591001 CDS YP_003399534.1 284049195 8738373 complement(2079016..2079501) 1 NC_013740.1 PFAM: NUDIX hydrolase; KEGG: hypothetical protein; NUDIX hydrolase 2079501 8738373 Acfer_1865 Acidaminococcus fermentans DSM 20731 NUDIX hydrolase YP_003399534.1 2079016 R 591001 CDS YP_003399535.1 284049196 8738374 complement(2079498..2080619) 1 NC_013740.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pmu:PM0932 hypothetical protein; peptidase M20 2080619 8738374 Acfer_1866 Acidaminococcus fermentans DSM 20731 peptidase M20 YP_003399535.1 2079498 R 591001 CDS YP_003399536.1 284049197 8738375 complement(2080723..2081709) 1 NC_013740.1 KEGG: cbe:Cbei_2756 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; urea amidolyase-like protein 2081709 8738375 Acfer_1867 Acidaminococcus fermentans DSM 20731 urea amidolyase-like protein YP_003399536.1 2080723 R 591001 CDS YP_003399537.1 284049198 8738376 complement(2081706..2082476) 1 NC_013740.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: bld:BLi00501 KipI; allophanate hydrolase subunit 1 2082476 8738376 Acfer_1868 Acidaminococcus fermentans DSM 20731 allophanate hydrolase subunit 1 YP_003399537.1 2081706 R 591001 CDS YP_003399538.1 284049199 8738377 complement(2082493..2083683) 1 NC_013740.1 KEGG: tau:Tola_1857 hypothetical protein; hypothetical protein 2083683 8738377 Acfer_1869 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399538.1 2082493 R 591001 CDS YP_003399539.1 284049200 8738378 complement(2083836..2084603) 1 NC_013740.1 PFAM: LamB/YcsF family protein; KEGG: gwc:GWCH70_1948 LamB/YcsF family protein; LamB/YcsF family protein 2084603 8738378 Acfer_1870 Acidaminococcus fermentans DSM 20731 LamB/YcsF family protein YP_003399539.1 2083836 R 591001 CDS YP_003399540.1 284049201 8738379 complement(2084751..2085926) 1 NC_013740.1 KEGG: bld:BLi00499 YcsG; protein YcsG 2085926 8738379 Acfer_1871 Acidaminococcus fermentans DSM 20731 protein YcsG YP_003399540.1 2084751 R 591001 CDS YP_003399541.1 284049202 8738380 complement(2086408..2088939) 1 NC_013740.1 PFAM: S-layer domain protein; YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: asu:Asuc_1158 YadA domain-containing protein; S-layer protein 2088939 8738380 Acfer_1872 Acidaminococcus fermentans DSM 20731 S-layer protein YP_003399541.1 2086408 R 591001 CDS YP_003399542.1 284049203 8738381 complement(2089302..2089823) 1 NC_013740.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: ere:EUBREC_1036 hypothetical protein; helix-turn-helix type 11 domain-containing protein 2089823 8738381 Acfer_1873 Acidaminococcus fermentans DSM 20731 helix-turn-helix type 11 domain-containing protein YP_003399542.1 2089302 R 591001 CDS YP_003399543.1 284049204 8738382 complement(2090206..2091138) 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC1046 LysR family transcriptional regulator; LysR family transcriptional regulator 2091138 8738382 Acfer_1874 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399543.1 2090206 R 591001 CDS YP_003399544.1 284049205 8738384 complement(2093246..2094181) 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: eel:EUBELI_00660 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator; LysR family transcriptional regulator 2094181 8738384 Acfer_1876 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399544.1 2093246 R 591001 CDS YP_003399545.1 284049206 8738385 complement(2094243..2095436) 1 NC_013740.1 PFAM: protein of unknown function DUF214; KEGG: dra:DR_B0050 hypothetical protein; hypothetical protein 2095436 8738385 Acfer_1877 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399545.1 2094243 R 591001 CDS YP_003399546.1 284049207 8738386 complement(2095436..2096092) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gau:GAU_2113 putative ABC transporter ATP- binding protein; ABC transporter 2096092 8738386 Acfer_1878 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399546.1 2095436 R 591001 CDS YP_003399547.1 284049208 8738387 complement(2096161..2096592) 1 NC_013740.1 KEGG: rru:Rru_A1290 hypothetical protein; hypothetical protein 2096592 8738387 Acfer_1879 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399547.1 2096161 R 591001 CDS YP_003399548.1 284049209 8738388 complement(2096594..2098459) 1 NC_013740.1 PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; KEGG: kra:Krad_0180 alkaline phosphatase; alkaline phosphatase 2098459 8738388 Acfer_1880 Acidaminococcus fermentans DSM 20731 alkaline phosphatase YP_003399548.1 2096594 R 591001 CDS YP_003399549.1 284049210 8738389 complement(2098682..2099350) 1 NC_013740.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: ate:Athe_1482 phosphate uptake regulator, PhoU; phosphate uptake regulator PhoU 2099350 8738389 Acfer_1881 Acidaminococcus fermentans DSM 20731 phosphate uptake regulator PhoU YP_003399549.1 2098682 R 591001 CDS YP_003399550.1 284049211 8738390 complement(2099364..2100149) 1 NC_013740.1 KEGG: ldb:Ldb0959 phosphate ABC transporter ATP- binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; phosphate ABC transporter ATPase 2100149 8738390 Acfer_1882 Acidaminococcus fermentans DSM 20731 phosphate ABC transporter ATPase YP_003399550.1 2099364 R 591001 CDS YP_003399551.1 284049212 8738391 complement(2100142..2101014) 1 NC_013740.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lbu:LBUL_0869 ABC-type phosphate transport system, permease component; phosphate ABC transporter permease 2101014 8738391 Acfer_1883 Acidaminococcus fermentans DSM 20731 phosphate ABC transporter permease YP_003399551.1 2100142 R 591001 CDS YP_003399552.1 284049213 8738393 complement(2101936..2102838) 1 NC_013740.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: lbu:LBUL_0867 ABC-type phosphate transport system, periplasmic component; phosphate binding protein 2102838 8738393 Acfer_1885 Acidaminococcus fermentans DSM 20731 phosphate binding protein YP_003399552.1 2101936 R 591001 CDS YP_003399553.1 284049214 8738394 complement(2103256..2104470) 1 NC_013740.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: bha:BH3958 carboxynorspermidine decarboxylase; Orn/DAP/Arg decarboxylase 2 2104470 8738394 Acfer_1886 Acidaminococcus fermentans DSM 20731 Orn/DAP/Arg decarboxylase 2 YP_003399553.1 2103256 R 591001 CDS YP_003399554.1 284049215 8738395 complement(2104470..2105729) 1 NC_013740.1 PFAM: Saccharopine dehydrogenase; KEGG: eel:EUBELI_01424 saccharopine dehydrogenase (NAD+, L-lysine forming); saccharopine dehydrogenase 2105729 8738395 Acfer_1887 Acidaminococcus fermentans DSM 20731 saccharopine dehydrogenase YP_003399554.1 2104470 R 591001 CDS YP_003399555.1 284049216 8738396 complement(2105951..2106805) 1 NC_013740.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: cpy:Cphy_3053 agmatinase; agmatinase 2106805 8738396 Acfer_1888 Acidaminococcus fermentans DSM 20731 agmatinase YP_003399555.1 2105951 R 591001 CDS YP_003399556.1 284049217 8738397 complement(2106792..2107673) 1 NC_013740.1 TIGRFAM: spermidine synthase; PFAM: Spermine synthase; KEGG: aoe:Clos_0384 spermidine synthase; spermidine synthase 2107673 8738397 Acfer_1889 Acidaminococcus fermentans DSM 20731 spermidine synthase YP_003399556.1 2106792 R 591001 CDS YP_003399557.1 284049218 8738398 complement(2107690..2109147) 1 NC_013740.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ere:EUBREC_3345 lysine decarboxylase; Orn/Lys/Arg decarboxylase major region 2109147 8738398 Acfer_1890 Acidaminococcus fermentans DSM 20731 Orn/Lys/Arg decarboxylase major region YP_003399557.1 2107690 R 591001 CDS YP_003399558.1 284049219 8738399 2109623..2110159 1 NC_013740.1 KEGG: ppd:Ppro_2443 eight transmembrane protein EpsH; hypothetical protein 2110159 8738399 Acfer_1891 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399558.1 2109623 D 591001 CDS YP_003399559.1 284049220 8738400 2110110..2110640 1 NC_013740.1 KEGG: bra:BRADO0372 hypothetical protein; hypothetical protein 2110640 8738400 Acfer_1892 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399559.1 2110110 D 591001 CDS YP_003399560.1 284049221 8738401 complement(2110690..2111946) 1 NC_013740.1 PFAM: hydrogenase large subunit domain protein; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; KEGG: dhd:Dhaf_0813 hydrogenase large subunit domain protein; hydrogenase large subunit domain-containing protein 2111946 8738401 Acfer_1893 Acidaminococcus fermentans DSM 20731 hydrogenase large subunit domain-containing protein YP_003399560.1 2110690 R 591001 CDS YP_003399561.1 284049222 8738402 complement(2112075..2113631) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dhd:Dhaf_3134 ABC transporter related; ABC transporter 2113631 8738402 Acfer_1894 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399561.1 2112075 R 591001 CDS YP_003399562.1 284049223 8738403 2113915..2114934 1 NC_013740.1 TIGRFAM: sulfite reductase, subunit A; KEGG: cac:CAC1513 anaerobic sulfite reductase (Fe-S subunit); sulfite reductase subunit A 2114934 8738403 Acfer_1895 Acidaminococcus fermentans DSM 20731 sulfite reductase subunit A YP_003399562.1 2113915 D 591001 CDS YP_003399563.1 284049224 8738404 2114924..2115739 1 NC_013740.1 TIGRFAM: sulfite reductase, subunit B; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: cbe:Cbei_0784 anaerobic sulfite reductase subunit B; sulfite reductase subunit B 2115739 8738404 Acfer_1896 Acidaminococcus fermentans DSM 20731 sulfite reductase subunit B YP_003399563.1 2114924 D 591001 CDS YP_003399564.1 284049225 8738405 2115750..2116727 1 NC_013740.1 TIGRFAM: sulfite reductase, subunit C; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: cac:CAC1515 anaerobic sulfite reduction protein C, reductase; sulfite reductase subunit C 2116727 8738405 Acfer_1897 Acidaminococcus fermentans DSM 20731 sulfite reductase subunit C YP_003399564.1 2115750 D 591001 CDS YP_003399565.1 284049226 8738406 2116886..2117404 1 NC_013740.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: eel:EUBELI_00633 hypothetical protein; phosphodiesterase, MJ0936 family 2117404 8738406 Acfer_1898 Acidaminococcus fermentans DSM 20731 phosphodiesterase, MJ0936 family YP_003399565.1 2116886 D 591001 CDS YP_003399566.1 284049227 8738407 2117418..2119463 1 NC_013740.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: pmr:PMI3246 vitamin B12/cobalamin outer membrane transporter; TonB-dependent receptor 2119463 8738407 Acfer_1899 Acidaminococcus fermentans DSM 20731 TonB-dependent receptor YP_003399566.1 2117418 D 591001 CDS YP_003399567.1 284049228 8738408 complement(2119498..2120271) 1 NC_013740.1 hypothetical protein 2120271 8738408 Acfer_1900 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399567.1 2119498 R 591001 CDS YP_003399568.1 284049229 8738409 complement(2120474..2120812) 1 NC_013740.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: cpr:CPR_2369 50S ribosomal protein L17; 50S ribosomal protein L17 2120812 8738409 Acfer_1901 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L17 YP_003399568.1 2120474 R 591001 CDS YP_003399569.1 284049230 8738410 complement(2120827..2121798) 1 NC_013740.1 KEGG: pjd:Pjdr2_5652 DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 2121798 8738410 Acfer_1902 Acidaminococcus fermentans DSM 20731 DNA-directed RNA polymerase subunit alpha YP_003399569.1 2120827 R 591001 CDS YP_003399570.1 284049231 8738411 complement(2121863..2122456) 1 NC_013740.1 KEGG: eel:EUBELI_00325 small subunit ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 2122456 8738411 Acfer_1903 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S4 YP_003399570.1 2121863 R 591001 CDS YP_003399571.1 284049232 8738412 complement(2122475..2122867) 1 NC_013740.1 TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; KEGG: cce:Ccel_0785 ribosomal protein S11; 30S ribosomal protein S11 2122867 8738412 Acfer_1904 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S11 YP_003399571.1 2122475 R 591001 CDS YP_003399572.1 284049233 8738413 complement(2122893..2123258) 1 NC_013740.1 TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; KEGG: sth:STH3050 30S ribosomal protein S13; 30S ribosomal protein S13 2123258 8738413 Acfer_1905 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S13 YP_003399572.1 2122893 R 591001 CDS YP_003399573.1 284049234 8738414 complement(2123272..2123385) 1 NC_013740.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: tte:TTE2267 ribosomal protein L36; 50S ribosomal protein L36 2123385 8738414 Acfer_1906 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L36 YP_003399573.1 2123272 R 591001 CDS YP_003399574.1 284049235 8738415 complement(2123415..2123633) 1 NC_013740.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bwe:BcerKBAB4_0128 translation initiation factor IF-1; translation initiation factor IF-1 2123633 8738415 Acfer_1907 Acidaminococcus fermentans DSM 20731 translation initiation factor IF-1 YP_003399574.1 2123415 R 591001 CDS YP_003399575.1 284049236 8738416 complement(2123646..2124290) 1 NC_013740.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: hmo:HM1_1399 adenylate kinase; adenylate kinase 2124290 8738416 Acfer_1908 Acidaminococcus fermentans DSM 20731 adenylate kinase YP_003399575.1 2123646 R 591001 CDS YP_003399576.1 284049237 8738417 complement(2124302..2125558) 1 NC_013740.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: hmo:HM1_1398 preprotein translocase, SecY subunit; preprotein translocase subunit SecY 2125558 8738417 Acfer_1909 Acidaminococcus fermentans DSM 20731 preprotein translocase subunit SecY YP_003399576.1 2124302 R 591001 CDS YP_003399577.1 284049238 8738418 complement(2125559..2125999) 1 NC_013740.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: cbf:CLI_3644 50S ribosomal protein L15; 50S ribosomal protein L15 2125999 8738418 Acfer_1910 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L15 YP_003399577.1 2125559 R 591001 CDS YP_003399578.1 284049239 8738419 complement(2126015..2126200) 1 NC_013740.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: pth:PTH_0337 ribosomal protein L30/L7E; 50S ribosomal protein L30 2126200 8738419 Acfer_1911 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L30 YP_003399578.1 2126015 R 591001 CDS YP_003399579.1 284049240 8738420 complement(2126213..2126713) 1 NC_013740.1 TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein; KEGG: pth:PTH_0336 30S ribosomal protein S5; 30S ribosomal protein S5 2126713 8738420 Acfer_1912 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S5 YP_003399579.1 2126213 R 591001 CDS YP_003399580.1 284049241 8738421 complement(2126732..2127094) 1 NC_013740.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: lba:Lebu_0255 ribosomal protein L18; 50S ribosomal protein L18 2127094 8738421 Acfer_1913 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L18 YP_003399580.1 2126732 R 591001 CDS YP_003399581.1 284049242 8738422 complement(2127120..2127668) 1 NC_013740.1 TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; KEGG: hmo:HM1_1393 50S ribosomal protein L6; 50S ribosomal protein L6 2127668 8738422 Acfer_1914 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L6 YP_003399581.1 2127120 R 591001 CDS YP_003399582.1 284049243 8738423 complement(2127698..2128096) 1 NC_013740.1 PFAM: ribosomal protein S8; KEGG: chy:CHY_2295 30S ribosomal protein S8; 30S ribosomal protein S8 2128096 8738423 Acfer_1915 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S8 YP_003399582.1 2127698 R 591001 CDS YP_003399583.1 284049244 8738424 complement(2128127..2128312) 1 NC_013740.1 PFAM: ribosomal protein S14; KEGG: hmo:HM1_1391 30S ribosomal protein S14; 30S ribosomal protein S14 2128312 8738424 Acfer_1916 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S14 YP_003399583.1 2128127 R 591001 CDS YP_003399584.1 284049245 8738425 complement(2128325..2128867) 1 NC_013740.1 PFAM: ribosomal protein L5; KEGG: dae:Dtox_0298 ribosomal protein L5; 50S ribosomal protein L5 2128867 8738425 Acfer_1917 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L5 YP_003399584.1 2128325 R 591001 CDS YP_003399585.1 284049246 8738426 complement(2128891..2129220) 1 NC_013740.1 KEGG: dae:Dtox_0297 ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; 50S ribosomal protein L24 2129220 8738426 Acfer_1918 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L24 YP_003399585.1 2128891 R 591001 CDS YP_003399586.1 284049247 8738427 complement(2129242..2129610) 1 NC_013740.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: eel:EUBELI_00309 large subunit ribosomal protein L14; 50S ribosomal protein L14 2129610 8738427 Acfer_1919 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L14 YP_003399586.1 2129242 R 591001 CDS YP_003399587.1 284049248 8738428 complement(2129650..2129910) 1 NC_013740.1 TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; KEGG: eel:EUBELI_00308 small subunit ribosomal protein S17; 30S ribosomal protein S17 2129910 8738428 Acfer_1920 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S17 YP_003399587.1 2129650 R 591001 CDS YP_003399588.1 284049249 8738429 complement(2129947..2130141) 1 NC_013740.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: btl:BALH_0116 50S ribosomal protein L29; 50S ribosomal protein L29 2130141 8738429 Acfer_1921 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L29 YP_003399588.1 2129947 R 591001 CDS YP_003399589.1 284049250 8738430 complement(2130141..2130599) 1 NC_013740.1 TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; KEGG: dsy:DSY0478 50S ribosomal protein L16; 50S ribosomal protein L16 2130599 8738430 Acfer_1922 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L16 YP_003399589.1 2130141 R 591001 CDS YP_003399590.1 284049251 8738431 complement(2130599..2131276) 1 NC_013740.1 KEGG: drm:Dred_0221 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; 30S ribosomal protein S3 2131276 8738431 Acfer_1923 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S3 YP_003399590.1 2130599 R 591001 CDS YP_003399591.1 284049252 8738432 complement(2131305..2131640) 1 NC_013740.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: sth:STH3070 50S ribosomal protein L22; 50S ribosomal protein L22 2131640 8738432 Acfer_1924 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L22 YP_003399591.1 2131305 R 591001 CDS YP_003399592.1 284049253 8738433 complement(2131665..2131940) 1 NC_013740.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: cth:Cthe_2907 30S ribosomal protein S19; 30S ribosomal protein S19 2131940 8738433 Acfer_1925 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S19 YP_003399592.1 2131665 R 591001 CDS YP_003399593.1 284049254 8738434 complement(2131969..2132799) 1 NC_013740.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: mta:Moth_2457 50S ribosomal protein L2; 50S ribosomal protein L2 2132799 8738434 Acfer_1926 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L2 YP_003399593.1 2131969 R 591001 CDS YP_003399594.1 284049255 8738435 complement(2132821..2133111) 1 NC_013740.1 PFAM: Ribosomal protein L25/L23; KEGG: chy:CHY_2307 50S ribosomal protein L23; 50S ribosomal protein L25 2133111 8738435 Acfer_1927 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L25 YP_003399594.1 2132821 R 591001 CDS YP_003399595.1 284049256 8738436 complement(2133111..2133740) 1 NC_013740.1 PFAM: ribosomal protein L4/L1e; KEGG: drm:Dred_0216 ribosomal protein L4/L1e; 50S ribosomal protein L4 2133740 8738436 Acfer_1928 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L4 YP_003399595.1 2133111 R 591001 CDS YP_003399596.1 284049257 8738437 complement(2133766..2134425) 1 NC_013740.1 TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; KEGG: hmo:HM1_1378 50S ribosomal protein L3; 50S ribosomal protein L3 2134425 8738437 Acfer_1929 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L3 YP_003399596.1 2133766 R 591001 CDS YP_003399597.1 284049258 8738438 complement(2134438..2134749) 1 NC_013740.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: dae:Dtox_0285 ribosomal protein S10; 30S ribosomal protein S10 2134749 8738438 Acfer_1930 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S10 YP_003399597.1 2134438 R 591001 CDS YP_003399598.1 284049259 8738439 complement(2134930..2136123) 1 NC_013740.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain protein; KEGG: aac:Aaci_2713 translation elongation factor Tu; translation elongation factor Tu 2136123 8738439 Acfer_1931 Acidaminococcus fermentans DSM 20731 translation elongation factor Tu YP_003399598.1 2134930 R 591001 CDS YP_003399599.1 284049260 8738440 complement(2136154..2138241) 1 NC_013740.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain protein; KEGG: dhd:Dhaf_0419 translation elongation factor G; translation elongation factor G 2138241 8738440 Acfer_1932 Acidaminococcus fermentans DSM 20731 translation elongation factor G YP_003399599.1 2136154 R 591001 CDS YP_003399600.1 284049261 8738441 complement(2138265..2138735) 1 NC_013740.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: afl:Aflv_0101 30S ribosomal protein S7; 30S ribosomal protein S7 2138735 8738441 Acfer_1933 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S7 YP_003399600.1 2138265 R 591001 CDS YP_003399601.1 284049262 8738442 complement(2138782..2139165) 1 NC_013740.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: hmo:HM1_1373 30S ribosomal protein S12; 30S ribosomal protein S12 2139165 8738442 Acfer_1934 Acidaminococcus fermentans DSM 20731 30S ribosomal protein S12 YP_003399601.1 2138782 R 591001 CDS YP_003399602.1 284049263 8738443 complement(2139231..2139485) 1 NC_013740.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: chy:CHY_2316 ribosomal protein L7ae family protein; ribosomal protein L7Ae/L30e/S12e/Gadd45 2139485 8738443 Acfer_1935 Acidaminococcus fermentans DSM 20731 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_003399602.1 2139231 R 591001 CDS YP_003399603.1 284049264 8738444 complement(2139846..2140199) 1 NC_013740.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: dds:Ddes_0206 cupin 2 conserved barrel domain protein; cupin 2140199 8738444 Acfer_1936 Acidaminococcus fermentans DSM 20731 cupin YP_003399603.1 2139846 R 591001 CDS YP_003399604.1 284049265 8738445 complement(2140256..2140732) 1 NC_013740.1 KEGG: lsa:LSA0310 integral membrane protein; integral membrane protein 2140732 8738445 Acfer_1937 Acidaminococcus fermentans DSM 20731 integral membrane protein YP_003399604.1 2140256 R 591001 CDS YP_003399605.1 284049266 8738446 complement(2140742..2141512) 1 NC_013740.1 PFAM: protein of unknown function DUF1212; KEGG: tde:TDE0712 hypothetical protein; hypothetical protein 2141512 8738446 Acfer_1938 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399605.1 2140742 R 591001 CDS YP_003399606.1 284049267 8738447 complement(2141523..2142212) 1 NC_013740.1 KEGG: hmo:HM1_0011 hypothetical protein; hypothetical protein 2142212 8738447 Acfer_1939 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399606.1 2141523 R 591001 CDS YP_003399607.1 284049268 8738448 complement(2142209..2144152) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hmo:HM1_1750 abc transporter, ATP-binding protein, putative; ABC transporter 2144152 8738448 Acfer_1940 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399607.1 2142209 R 591001 CDS YP_003399608.1 284049269 8738449 complement(2144158..2145147) 1 NC_013740.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: cth:Cthe_0186 UDP-galactose 4-epimerase; UDP-glucose 4-epimerase 2145147 8738449 Acfer_1941 Acidaminococcus fermentans DSM 20731 UDP-glucose 4-epimerase YP_003399608.1 2144158 R 591001 CDS YP_003399609.1 284049270 8738450 complement(2145161..2146525) 1 NC_013740.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: drm:Dred_3126 phosphomannomutase; phosphomannomutase 2146525 8738450 Acfer_1942 Acidaminococcus fermentans DSM 20731 phosphomannomutase YP_003399609.1 2145161 R 591001 CDS YP_003399610.1 284049271 8738451 complement(2146544..2147539) 1 NC_013740.1 hypothetical protein 2147539 8738451 Acfer_1943 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399610.1 2146544 R 591001 CDS YP_003399611.1 284049272 8738452 2147697..2148251 1 NC_013740.1 hypothetical protein 2148251 8738452 Acfer_1944 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399611.1 2147697 D 591001 CDS YP_003399612.1 284049273 8738454 complement(2148685..2149878) 1 NC_013740.1 PFAM: integrase family protein; KEGG: sar:SAR0366 putative integrase; integrase family protein 2149878 8738454 Acfer_1945 Acidaminococcus fermentans DSM 20731 integrase family protein YP_003399612.1 2148685 R 591001 CDS YP_003399613.1 284049274 8738455 complement(2149947..2150576) 1 NC_013740.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: cbt:CLH_1700 putative transcriptional regulator; XRE family transcriptional regulator 2150576 8738455 Acfer_1946 Acidaminococcus fermentans DSM 20731 XRE family transcriptional regulator YP_003399613.1 2149947 R 591001 CDS YP_003399614.1 284049275 8738456 2150690..2150896 1 NC_013740.1 hypothetical protein 2150896 8738456 Acfer_1947 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399614.1 2150690 D 591001 CDS YP_003399615.1 284049276 8738457 2150943..2151182 1 NC_013740.1 hypothetical protein 2151182 8738457 Acfer_1948 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399615.1 2150943 D 591001 CDS YP_003399616.1 284049277 8738458 2151306..2151554 1 NC_013740.1 KEGG: dal:Dalk_4182 hypothetical protein; hypothetical protein 2151554 8738458 Acfer_1949 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399616.1 2151306 D 591001 CDS YP_003399617.1 284049278 8738459 2151536..2151751 1 NC_013740.1 hypothetical protein 2151751 8738459 Acfer_1950 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399617.1 2151536 D 591001 CDS YP_003399618.1 284049279 8738460 2151888..2154566 1 NC_013740.1 PFAM: protein of unknown function DUF927; KEGG: cpy:Cphy_2984 superfamily II helicase; hypothetical protein 2154566 8738460 Acfer_1951 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399618.1 2151888 D 591001 CDS YP_003399619.1 284049280 8738461 2155062..2155250 1 NC_013740.1 hypothetical protein 2155250 8738461 Acfer_1952 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399619.1 2155062 D 591001 CDS YP_003399620.1 284049281 8738462 complement(2155952..2156374) 1 NC_013740.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cpy:Cphy_0009 BadM/Rrf2 family transcriptional regulator; AsnC family transcriptional regulator 2156374 8738462 Acfer_1953 Acidaminococcus fermentans DSM 20731 AsnC family transcriptional regulator YP_003399620.1 2155952 R 591001 CDS YP_003399621.1 284049282 8738463 2156599..2158434 1 NC_013740.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: cbt:CLH_1645 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2158434 8738463 Acfer_1954 Acidaminococcus fermentans DSM 20731 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003399621.1 2156599 D 591001 CDS YP_003399622.1 284049283 8738464 2158428..2160158 1 NC_013740.1 TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; KEGG: cbt:CLH_1644 iron hydrogenase 1; hydrogenase, Fe-only 2160158 8738464 Acfer_1955 Acidaminococcus fermentans DSM 20731 hydrogenase, Fe-only YP_003399622.1 2158428 D 591001 CDS YP_003399623.1 284049284 8738465 complement(2160374..2161018) 1 NC_013740.1 KEGG: rso:RSc2165 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase 2161018 8738465 Acfer_1956 Acidaminococcus fermentans DSM 20731 pyrrolidone-carboxylate peptidase YP_003399623.1 2160374 R 591001 CDS YP_003399624.1 284049285 8738466 2161217..2162362 1 NC_013740.1 PFAM: Capsule synthesis protein, CapA; KEGG: cdf:CD0173 putative lipoprotein; capsule synthesis protein CapA 2162362 8738466 Acfer_1957 Acidaminococcus fermentans DSM 20731 capsule synthesis protein CapA YP_003399624.1 2161217 D 591001 CDS YP_003399625.1 284049286 8738467 complement(2162545..2163453) 1 NC_013740.1 PFAM: major facilitator superfamily MFS_1; KEGG: apv:Apar_0425 drug resistance transporter, EmrB/QacA subfamily; major facilitator superfamily protein 2163453 8738467 Acfer_1958 Acidaminococcus fermentans DSM 20731 major facilitator superfamily protein YP_003399625.1 2162545 R 591001 CDS YP_003399626.1 284049287 8738469 complement(2164458..2165729) 1 NC_013740.1 KEGG: ypg:YpAngola_A0185 hypothetical protein; hypothetical protein 2165729 8738469 Acfer_1960 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399626.1 2164458 R 591001 CDS YP_003399627.1 284049288 8738470 complement(2165865..2168408) 1 NC_013740.1 KEGG: dae:Dtox_2007 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase- like; SMART: AAA ATPase; ATP-dependent chaperone ClpB 2168408 8738470 Acfer_1961 Acidaminococcus fermentans DSM 20731 ATP-dependent chaperone ClpB YP_003399627.1 2165865 R 591001 CDS YP_003399628.1 284049289 8738471 complement(2168578..2170083) 1 NC_013740.1 PFAM: adenylate cyclase; KEGG: pfl:PFL_5943 hypothetical protein; adenylate cyclase 2170083 8738471 Acfer_1962 Acidaminococcus fermentans DSM 20731 adenylate cyclase YP_003399628.1 2168578 R 591001 CDS YP_003399629.1 284049290 8738472 2170291..2170710 1 NC_013740.1 PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulator, Fur family 2170710 8738472 Acfer_1963 Acidaminococcus fermentans DSM 20731 ferric uptake regulator, Fur family YP_003399629.1 2170291 D 591001 CDS YP_003399630.1 284049291 8738473 complement(2170924..2172237) 1 NC_013740.1 PFAM: Dicarboxylate carrier MatC domain protein; KEGG: mmw:Mmwyl1_0970 dicarboxylate carrier MatC domain-containing protein; dicarboxylate carrier MatC domain-containing protein 2172237 8738473 Acfer_1964 Acidaminococcus fermentans DSM 20731 dicarboxylate carrier MatC domain-containing protein YP_003399630.1 2170924 R 591001 CDS YP_003399631.1 284049292 8738474 complement(2172259..2173149) 1 NC_013740.1 KEGG: cma:Cmaq_1396 hypothetical protein; hypothetical protein 2173149 8738474 Acfer_1965 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399631.1 2172259 R 591001 CDS YP_003399632.1 284049293 8738475 2173279..2174199 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator; LysR family transcriptional regulator 2174199 8738475 Acfer_1966 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399632.1 2173279 D 591001 CDS YP_003399633.1 284049294 8738476 2174436..2175362 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: amt:Amet_3215 LysR family transcriptional regulator; LysR family transcriptional regulator 2175362 8738476 Acfer_1967 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399633.1 2174436 D 591001 CDS YP_003399634.1 284049295 8738477 complement(2175406..2176587) 1 NC_013740.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: efe:EFER_3668 putative isocitrate dehydrogenase; isocitrate/isopropylmalate dehydrogenase 2176587 8738477 Acfer_1968 Acidaminococcus fermentans DSM 20731 isocitrate/isopropylmalate dehydrogenase YP_003399634.1 2175406 R 591001 CDS YP_003399635.1 284049296 8738478 complement(2176750..2178015) 1 NC_013740.1 PFAM: Dicarboxylate carrier MatC domain protein; KEGG: efe:EFER_3664 hypothetical protein; putative membrane protein; dicarboxylate carrier MatC domain-containing protein 2178015 8738478 Acfer_1969 Acidaminococcus fermentans DSM 20731 dicarboxylate carrier MatC domain-containing protein YP_003399635.1 2176750 R 591001 CDS YP_003399636.1 284049297 8738479 complement(2178028..2179227) 1 NC_013740.1 KEGG: efe:EFER_3663 putative lactonase; putative lactonase 2179227 8738479 Acfer_1970 Acidaminococcus fermentans DSM 20731 putative lactonase YP_003399636.1 2178028 R 591001 CDS YP_003399637.1 284049298 8738480 complement(2179224..2181179) 1 NC_013740.1 TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: mta:Moth_1882 aconitate hydratase; aconitate hydratase 2181179 8738480 Acfer_1971 Acidaminococcus fermentans DSM 20731 aconitate hydratase YP_003399637.1 2179224 R 591001 CDS YP_003399638.1 284049299 8738481 2181344..2182258 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: bbe:BBR47_25340 transcriptional regulator; LysR family transcriptional regulator 2182258 8738481 Acfer_1972 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399638.1 2181344 D 591001 CDS YP_003399639.1 284049300 8738482 complement(2182278..2184563) 1 NC_013740.1 PFAM: aconitate hydratase domain protein; KEGG: ecl:EcolC_2891 aconitate hydratase domain- containing protein; aconitate hydratase 2184563 8738482 Acfer_1973 Acidaminococcus fermentans DSM 20731 aconitate hydratase YP_003399639.1 2182278 R 591001 CDS YP_003399640.1 284049301 8738483 complement(2184591..2185733) 1 NC_013740.1 PFAM: protein of unknown function DUF453; KEGG: efe:EFER_3666 hypothetical protein; hypothetical protein 2185733 8738483 Acfer_1974 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399640.1 2184591 R 591001 CDS YP_003399641.1 284049302 8738485 complement(2186643..2187536) 1 NC_013740.1 PFAM: amidohydrolase 2; KEGG: mno:Mnod_8318 amidohydrolase 2; amidohydrolase 2 2187536 8738485 Acfer_1976 Acidaminococcus fermentans DSM 20731 amidohydrolase 2 YP_003399641.1 2186643 R 591001 CDS YP_003399642.1 284049303 8738488 complement(2188843..2189382) 1 NC_013740.1 PFAM: nitroreductase; KEGG: bvu:BVU_2494 putative NADH dehydrogenase/NAD(P)H nitroreductase; nitroreductase 2189382 8738488 Acfer_1979 Acidaminococcus fermentans DSM 20731 nitroreductase YP_003399642.1 2188843 R 591001 CDS YP_003399643.1 284049304 8738489 complement(2189450..2190592) 1 NC_013740.1 PFAM: amidohydrolase; KEGG: sei:SPC_4564 dihydroorotase; amidohydrolase 2190592 8738489 Acfer_1980 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399643.1 2189450 R 591001 CDS YP_003399644.1 284049305 8738490 complement(2190649..2192985) 1 NC_013740.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; Extracellular solute-binding protein, family 7, bacteria; KEGG: ere:EUBREC_2838 hypothetical protein; TRAP dicarboxylate transporter subunit DctM 2192985 8738490 Acfer_1981 Acidaminococcus fermentans DSM 20731 TRAP dicarboxylate transporter subunit DctM YP_003399644.1 2190649 R 591001 CDS YP_003399645.1 284049306 8738491 complement(2192982..2193512) 1 NC_013740.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: asu:Asuc_0367 tripartite ATP-independent periplasmic transporter DctQ; tripartite AtP-independent periplasmic transporter subunit DctQ 2193512 8738491 Acfer_1982 Acidaminococcus fermentans DSM 20731 tripartite AtP-independent periplasmic transporter subunit DctQ YP_003399645.1 2192982 R 591001 CDS YP_003399646.1 284049307 8738492 2193658..2194629 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator; LysR family transcriptional regulator 2194629 8738492 Acfer_1983 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399646.1 2193658 D 591001 CDS YP_003399647.1 284049308 8738493 complement(2194665..2195039) 1 NC_013740.1 PFAM: protein of unknown function DUF1667; KEGG: tpd:Teth39_0539 hypothetical protein; hypothetical protein 2195039 8738493 Acfer_1984 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399647.1 2194665 R 591001 CDS YP_003399648.1 284049309 8738494 complement(2195032..2196300) 1 NC_013740.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sat:SYN_02447 pyridine nucleotide-disulphide oxidoreductase family protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2196300 8738494 Acfer_1985 Acidaminococcus fermentans DSM 20731 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003399648.1 2195032 R 591001 CDS YP_003399649.1 284049310 8738495 complement(2196304..2197830) 1 NC_013740.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sat:SYN_02446 glycerol-3-phosphate dehydrogenase; FAD dependent oxidoreductase 2197830 8738495 Acfer_1986 Acidaminococcus fermentans DSM 20731 FAD dependent oxidoreductase YP_003399649.1 2196304 R 591001 CDS YP_003399650.1 284049311 8738496 complement(2197846..2199168) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: ere:EUBREC_1208 citrate transporter; citrate transporter 2199168 8738496 Acfer_1987 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003399650.1 2197846 R 591001 CDS YP_003399651.1 284049312 8738497 2199409..2200215 1 NC_013740.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: amt:Amet_0763 helix-turn-helix domain- containing protein; AraC family transcriptional regulator 2200215 8738497 Acfer_1988 Acidaminococcus fermentans DSM 20731 AraC family transcriptional regulator YP_003399651.1 2199409 D 591001 CDS YP_003399652.1 284049313 8738498 complement(2200249..2201517) 1 NC_013740.1 KEGG: gka:GK1970 hypothetical protein; hypothetical protein 2201517 8738498 Acfer_1989 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399652.1 2200249 R 591001 CDS YP_003399653.1 284049314 8738499 complement(2201690..2202076) 1 NC_013740.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: cce:Ccel_2593 endoribonuclease L-PSP; endoribonuclease L-PSP 2202076 8738499 Acfer_1990 Acidaminococcus fermentans DSM 20731 endoribonuclease L-PSP YP_003399653.1 2201690 R 591001 CDS YP_003399654.1 284049315 8738500 complement(2202073..2203680) 1 NC_013740.1 PFAM: D-aminoacylase domain protein; amidohydrolase; KEGG: drm:Dred_0263 N-acyl-D-amino-acid deacylase; N-acyl-D-amino-acid deacylase 2203680 8738500 Acfer_1991 Acidaminococcus fermentans DSM 20731 N-acyl-D-amino-acid deacylase YP_003399654.1 2202073 R 591001 CDS YP_003399655.1 284049316 8738501 complement(2203697..2205172) 1 NC_013740.1 PFAM: Na+/solute symporter; KEGG: dde:Dde_1268 putative sodium:solute symport protein; Na+/solute symporter 2205172 8738501 Acfer_1992 Acidaminococcus fermentans DSM 20731 Na+/solute symporter YP_003399655.1 2203697 R 591001 CDS YP_003399656.1 284049317 8738502 complement(2205254..2206438) 1 NC_013740.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: drm:Dred_0260 peptidase; peptidase M20 2206438 8738502 Acfer_1993 Acidaminococcus fermentans DSM 20731 peptidase M20 YP_003399656.1 2205254 R 591001 CDS YP_003399657.1 284049318 8738503 complement(2206467..2207663) 1 NC_013740.1 TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dhd:Dhaf_2963 diaminopropionate ammonia-lyase; diaminopropionate ammonia-lyase 2207663 8738503 Acfer_1994 Acidaminococcus fermentans DSM 20731 diaminopropionate ammonia-lyase YP_003399657.1 2206467 R 591001 CDS YP_003399658.1 284049319 8738504 complement(2207898..2209688) 1 NC_013740.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: drm:Dred_0258 sigma-54 dependent trancsriptional regulator; Fis family sigma-54 specific transcriptional regulator 2209688 8738504 Acfer_1995 Acidaminococcus fermentans DSM 20731 Fis family sigma-54 specific transcriptional regulator YP_003399658.1 2207898 R 591001 CDS YP_003399659.1 284049320 8738505 2209878..2211083 1 NC_013740.1 PFAM: sodium:dicarboxylate symporter; KEGG: shw:Sputw3181_3312 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 2211083 8738505 Acfer_1996 Acidaminococcus fermentans DSM 20731 sodium:dicarboxylate symporter YP_003399659.1 2209878 D 591001 CDS YP_003399660.1 284049321 8738506 2211355..2212203 1 NC_013740.1 PFAM: alpha/beta hydrolase fold; KEGG: ctc:CTC02183 putative arylesterase, non-heme chloride peroxidase; alpha/beta hydrolase fold protein 2212203 8738506 Acfer_1997 Acidaminococcus fermentans DSM 20731 alpha/beta hydrolase fold protein YP_003399660.1 2211355 D 591001 CDS YP_003399661.1 284049322 8738508 complement(2212932..2214038) 1 NC_013740.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: asu:Asuc_1715 ABC transporter related; ABC transporter 2214038 8738508 Acfer_1999 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399661.1 2212932 R 591001 CDS YP_003399662.1 284049323 8738509 complement(2214042..2215766) 1 NC_013740.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmu:PM1455 AfuB; binding-protein-dependent transport system inner membrane protein 2215766 8738509 Acfer_2000 Acidaminococcus fermentans DSM 20731 binding-protein-dependent transport system inner membrane protein YP_003399662.1 2214042 R 591001 CDS YP_003399663.1 284049324 8738510 complement(2215753..2216847) 1 NC_013740.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: pmu:PM1456 hypothetical protein; ABC transporter 2216847 8738510 Acfer_2001 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399663.1 2215753 R 591001 CDS YP_003399664.1 284049325 8738511 complement(2216902..2217939) 1 NC_013740.1 PFAM: extracellular solute-binding protein family 1; KEGG: sth:STH1146 ABC transporter substrate-binding protein; extracellular solute-binding protein 2217939 8738511 Acfer_2002 Acidaminococcus fermentans DSM 20731 extracellular solute-binding protein YP_003399664.1 2216902 R 591001 CDS YP_003399665.1 284049326 8738512 complement(2218215..2218688) 1 NC_013740.1 KEGG: bcl:ABC0392 hypothetical protein; hypothetical protein 2218688 8738512 Acfer_2003 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399665.1 2218215 R 591001 CDS YP_003399666.1 284049327 8738513 complement(2218763..2219746) 1 NC_013740.1 PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: sat:SYN_01147 arginase; Arginase/agmatinase/formiminoglutamase 2219746 8738513 Acfer_2004 Acidaminococcus fermentans DSM 20731 Arginase/agmatinase/formiminoglutamase YP_003399666.1 2218763 R 591001 CDS YP_003399667.1 284049328 8738514 complement(2219792..2221021) 1 NC_013740.1 PFAM: natural resistance-associated macrophage protein; KEGG: oih:OB0737 hypothetical protein; natural resistance-associated macrophage protein 2221021 8738514 Acfer_2005 Acidaminococcus fermentans DSM 20731 natural resistance-associated macrophage protein YP_003399667.1 2219792 R 591001 CDS YP_003399668.1 284049329 8738515 2221214..2221993 1 NC_013740.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: aau:AAur_0478 IclR family transcriptional regulator; transcriptional regulator, IclR family 2221993 8738515 Acfer_2006 Acidaminococcus fermentans DSM 20731 transcriptional regulator, IclR family YP_003399668.1 2221214 D 591001 CDS YP_003399669.1 284049330 8738516 2221993..2223216 1 NC_013740.1 KEGG: oih:OB3444 allantoate amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; peptidase dimerisation domain protein; amidase 2223216 8738516 Acfer_2007 Acidaminococcus fermentans DSM 20731 amidase YP_003399669.1 2221993 D 591001 CDS YP_003399670.1 284049331 8738517 complement(2223336..2224514) 1 NC_013740.1 KEGG: amt:Amet_4336 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2224514 8738517 Acfer_2008 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399670.1 2223336 R 591001 CDS YP_003399671.1 284049332 8738518 complement(2224511..2225854) 1 NC_013740.1 PFAM: sodium/glutamate symporter; KEGG: cgt:cgR_2677 hypothetical protein; sodium/glutamate symporter 2225854 8738518 Acfer_2009 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003399671.1 2224511 R 591001 CDS YP_003399672.1 284049333 8738519 complement(2225892..2226623) 1 NC_013740.1 PFAM: Creatininase; KEGG: tte:TTE1020 uncharacterized protein, putative amidase; creatininase 2226623 8738519 Acfer_2010 Acidaminococcus fermentans DSM 20731 creatininase YP_003399672.1 2225892 R 591001 CDS YP_003399673.1 284049334 8738520 2226787..2227674 1 NC_013740.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: cac:CAC3409 LysR family transcriptional regulator; LysR family transcriptional regulator 2227674 8738520 Acfer_2011 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399673.1 2226787 D 591001 CDS YP_003399674.1 284049335 8738521 complement(2227731..2228360) 1 NC_013740.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: amt:Amet_0553 GntR family transcriptional regulator; GntR family transcriptional regulator 2228360 8738521 Acfer_2012 Acidaminococcus fermentans DSM 20731 GntR family transcriptional regulator YP_003399674.1 2227731 R 591001 CDS YP_003399675.1 284049336 8738522 2228533..2229546 1 NC_013740.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: csa:Csal_2976 TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 2229546 8738522 Acfer_2013 Acidaminococcus fermentans DSM 20731 TRAP dicarboxylate transporter subunit DctP YP_003399675.1 2228533 D 591001 CDS YP_003399676.1 284049337 8738523 2229615..2230157 1 NC_013740.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: csa:Csal_1073 tripartite ATP-independent periplasmic transporter DctQ; tripartite AtP-independent periplasmic transporter subunit DctQ 2230157 8738523 Acfer_2014 Acidaminococcus fermentans DSM 20731 tripartite AtP-independent periplasmic transporter subunit DctQ YP_003399676.1 2229615 D 591001 CDS YP_003399677.1 284049338 8738524 2230154..2231452 1 NC_013740.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: pat:Patl_0772 TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 2231452 8738524 Acfer_2015 Acidaminococcus fermentans DSM 20731 TRAP dicarboxylate transporter subunit DctM YP_003399677.1 2230154 D 591001 CDS YP_003399678.1 284049339 8738525 2231462..2232625 1 NC_013740.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: csc:Csac_2739 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 2232625 8738525 Acfer_2016 Acidaminococcus fermentans DSM 20731 mandelate racemase/muconate lactonizing protein YP_003399678.1 2231462 D 591001 CDS YP_003399679.1 284049340 8738526 2233177..2233581 1 NC_013740.1 KEGG: bcy:Bcer98_3736 putative transposase; putative transposase 2233581 8738526 Acfer_2017 Acidaminococcus fermentans DSM 20731 putative transposase YP_003399679.1 2233177 D 591001 CDS YP_003399680.1 284049341 8738527 2233593..2234591 1 NC_013740.1 PFAM: Integrase catalytic region; KEGG: afl:Aflv_2103 transposase; integrase catalytic subunit 2234591 8738527 Acfer_2018 Acidaminococcus fermentans DSM 20731 integrase catalytic subunit YP_003399680.1 2233593 D 591001 CDS YP_003399681.1 284049342 8738529 complement(2235286..2236764) 1 NC_013740.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: efe:EFER_0273 hypothetical protein; hypothetical protein 2236764 8738529 Acfer_2020 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399681.1 2235286 R 591001 CDS YP_003399682.1 284049343 8738530 complement(2236775..2237245) 1 NC_013740.1 KEGG: efe:EFER_0274 hypothetical protein; putative membrane protein; hypothetical protein 2237245 8738530 Acfer_2021 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399682.1 2236775 R 591001 CDS YP_003399683.1 284049344 8738531 complement(2237335..2238336) 1 NC_013740.1 PFAM: conserved hypothetical protein; KEGG: asu:Asuc_1849 hypothetical protein; hypothetical protein 2238336 8738531 Acfer_2022 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399683.1 2237335 R 591001 CDS YP_003399684.1 284049345 8738532 2238531..2239466 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cac:CAC3361 LysR family transcriptional regulator; LysR family transcriptional regulator 2239466 8738532 Acfer_2023 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399684.1 2238531 D 591001 CDS YP_003399685.1 284049346 8738533 complement(2239828..2241135) 1 NC_013740.1 KEGG: apa:APP7_0185 predicted Mn2+ and Fe2+ transporters of the NRAMP family; NRAMP family Mn2+/Fe2+ transporter 2241135 8738533 Acfer_2024 Acidaminococcus fermentans DSM 20731 NRAMP family Mn2+/Fe2+ transporter YP_003399685.1 2239828 R 591001 CDS YP_003399686.1 284049347 8738534 complement(2241445..2242797) 1 NC_013740.1 KEGG: ere:EUBREC_3109 hypothetical protein; hypothetical protein 2242797 8738534 Acfer_2025 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399686.1 2241445 R 591001 CDS YP_003399687.1 284049348 8738536 complement(2244145..2244984) 1 NC_013740.1 KEGG: cma:Cmaq_1396 hypothetical protein; hypothetical protein 2244984 8738536 Acfer_2027 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399687.1 2244145 R 591001 CDS YP_003399688.1 284049349 8738537 complement(2244997..2246250) 1 NC_013740.1 PFAM: Citrate transporter; KEGG: dde:Dde_1252 cation transporter; citrate transporter 2246250 8738537 Acfer_2028 Acidaminococcus fermentans DSM 20731 citrate transporter YP_003399688.1 2244997 R 591001 CDS YP_003399689.1 284049350 8738538 complement(2246538..2247566) 1 NC_013740.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rpc:RPC_2727 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2247566 8738538 Acfer_2029 Acidaminococcus fermentans DSM 20731 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_003399689.1 2246538 R 591001 CDS YP_003399690.1 284049351 8738539 complement(2247705..2249027) 1 NC_013740.1 PFAM: sodium/glutamate symporter; KEGG: pdi:BDI_1632 hypothetical protein; sodium/glutamate symporter 2249027 8738539 Acfer_2030 Acidaminococcus fermentans DSM 20731 sodium/glutamate symporter YP_003399690.1 2247705 R 591001 CDS YP_003399691.1 284049352 8738540 complement(2249158..2249859) 1 NC_013740.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: rpc:RPC_2726 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 2249859 8738540 Acfer_2031 Acidaminococcus fermentans DSM 20731 dimethylmenaquinone methyltransferase YP_003399691.1 2249158 R 591001 CDS YP_003399692.1 284049353 8738541 2250048..2251013 1 NC_013740.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2867 LysR family transcriptional regulator; LysR family transcriptional regulator 2251013 8738541 Acfer_2032 Acidaminococcus fermentans DSM 20731 LysR family transcriptional regulator YP_003399692.1 2250048 D 591001 CDS YP_003399693.1 284049354 8738542 complement(2251156..2252046) 1 NC_013740.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; NADP oxidoreductase coenzyme F420- dependent; KEGG: bcl:ABC3757 hypothetical protein; Phosphogluconate dehydrogenase 2252046 8738542 Acfer_2033 Acidaminococcus fermentans DSM 20731 Phosphogluconate dehydrogenase YP_003399693.1 2251156 R 591001 CDS YP_003399694.1 284049355 8738543 complement(2252264..2253853) 1 NC_013740.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: amt:Amet_4275 D-3-phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase 2253853 8738543 Acfer_2034 Acidaminococcus fermentans DSM 20731 D-3-phosphoglycerate dehydrogenase YP_003399694.1 2252264 R 591001 CDS YP_003399695.1 284049356 8738544 complement(2254169..2255152) 1 NC_013740.1 PFAM: protein of unknown function DUF195; KEGG: mca:MCA0339 hypothetical protein; hypothetical protein 2255152 8738544 Acfer_2035 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399695.1 2254169 R 591001 CDS YP_003399696.1 284049357 8738545 2255300..2255908 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: bcq:BCQ_4468 transcriptional regulator, TetR family; transcriptional regulator, TetR family 2255908 8738545 Acfer_2036 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003399696.1 2255300 D 591001 CDS YP_003399697.1 284049358 8738546 complement(2256041..2258155) 1 NC_013740.1 TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ere:EUBREC_1234 hypothetical protein; heavy metal translocating P-type ATPase 2258155 8738546 Acfer_2037 Acidaminococcus fermentans DSM 20731 heavy metal translocating P-type ATPase YP_003399697.1 2256041 R 591001 CDS YP_003399698.1 284049359 8738547 complement(2258188..2258481) 1 NC_013740.1 KEGG: apr:Apre_0033 hypothetical protein; hypothetical protein 2258481 8738547 Acfer_2038 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399698.1 2258188 R 591001 CDS YP_003399699.1 284049360 8738548 complement(2258862..2267888) 1 NC_013740.1 PFAM: YadA domain protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: apl:APL_0104 autotransporter adhesin; YadA domain-containing protein 2267888 8738548 Acfer_2039 Acidaminococcus fermentans DSM 20731 YadA domain-containing protein YP_003399699.1 2258862 R 591001 CDS YP_003399700.1 284049361 8738549 complement(2268341..2268619) 1 NC_013740.1 TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; KEGG: fma:FMG_1585 hypothetical protein; RelB/DinJ family addiction module antitoxin 2268619 8738549 Acfer_2040 Acidaminococcus fermentans DSM 20731 RelB/DinJ family addiction module antitoxin YP_003399700.1 2268341 R 591001 CDS YP_003399701.1 284049362 8738550 complement(2268704..2270311) 1 NC_013740.1 PFAM: gamma-glutamyltranspeptidase; KEGG: amt:Amet_0676 gamma-glutamyltransferase; gamma-glutamyltransferase 2270311 8738550 Acfer_2041 Acidaminococcus fermentans DSM 20731 gamma-glutamyltransferase YP_003399701.1 2268704 R 591001 CDS YP_003399702.1 284049363 8738551 complement(2270330..2271649) 1 NC_013740.1 KEGG: bfs:BF1066 putative ATP/GTP-binding protein; putative ATP/GTP-binding protein 2271649 8738551 Acfer_2042 Acidaminococcus fermentans DSM 20731 putative ATP/GTP-binding protein YP_003399702.1 2270330 R 591001 CDS YP_003399703.1 284049364 8738552 complement(2271756..2273024) 1 NC_013740.1 KEGG: bhy:BHWA1_00150 peptidase T; TIGRFAM: peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T 2273024 8738552 Acfer_2043 Acidaminococcus fermentans DSM 20731 peptidase T YP_003399703.1 2271756 R 591001 CDS YP_003399704.1 284049365 8738553 complement(2273235..2275409) 1 NC_013740.1 PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sth:STH2928 ribosomal protein S1-like protein; Tex-like protein 2275409 8738553 Acfer_2044 Acidaminococcus fermentans DSM 20731 Tex-like protein YP_003399704.1 2273235 R 591001 CDS YP_003399705.1 284049366 8738554 complement(2275501..2276169) 1 NC_013740.1 PFAM: cobalt transport protein; KEGG: pth:PTH_1659 ABC-type cobalt transport system, permease component CbiQ and related transporters; cobalt transport protein 2276169 8738554 Acfer_2045 Acidaminococcus fermentans DSM 20731 cobalt transport protein YP_003399705.1 2275501 R 591001 CDS YP_003399706.1 284049367 8738555 complement(2276166..2276975) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mba:Mbar_A3550 cobalt transport ATP-binding protein; ABC transporter 2276975 8738555 Acfer_2046 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399706.1 2276166 R 591001 CDS YP_003399707.1 284049368 8738556 complement(2276972..2277835) 1 NC_013740.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tsi:TSIB_1505 putative ABC transporter ATP- binding protein; ABC transporter 2277835 8738556 Acfer_2047 Acidaminococcus fermentans DSM 20731 ABC transporter YP_003399707.1 2276972 R 591001 CDS YP_003399708.1 284049369 8738557 complement(2277828..2278397) 1 NC_013740.1 KEGG: hmo:HM1_0776 hypothetical protein; hypothetical protein 2278397 8738557 Acfer_2048 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399708.1 2277828 R 591001 CDS YP_003399709.1 284049370 8738558 complement(2278535..2279257) 1 NC_013740.1 PFAM: regulatory protein TetR; KEGG: bbe:BBR47_26850 putative transcriptional regulator; transcriptional regulator, TetR family 2279257 8738558 Acfer_2049 Acidaminococcus fermentans DSM 20731 transcriptional regulator, TetR family YP_003399709.1 2278535 R 591001 CDS YP_003399710.1 284049371 8738559 complement(2279534..2279977) 1 NC_013740.1 PFAM: heat shock protein Hsp20; KEGG: eel:EUBELI_20272 hypothetical protein; heat shock protein Hsp20 2279977 8738559 Acfer_2050 Acidaminococcus fermentans DSM 20731 heat shock protein Hsp20 YP_003399710.1 2279534 R 591001 CDS YP_003399711.1 284049372 8738560 complement(2280190..2281005) 1 NC_013740.1 KEGG: hypothetical protein; hypothetical protein 2281005 8738560 Acfer_2051 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399711.1 2280190 R 591001 CDS YP_003399712.1 284049373 8738561 2281139..2281483 1 NC_013740.1 KEGG: dsy:DSY1255 hypothetical protein; hypothetical protein 2281483 8738561 Acfer_2052 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399712.1 2281139 D 591001 CDS YP_003399713.1 284049374 8738562 complement(2281677..2283053) 1 NC_013740.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; KEGG: cla:Cla_0424 fumarate hydratase, class II; class II fumarate hydratase 2283053 8738562 Acfer_2053 Acidaminococcus fermentans DSM 20731 class II fumarate hydratase YP_003399713.1 2281677 R 591001 CDS YP_003399714.1 284049375 8738563 complement(2283155..2285083) 1 NC_013740.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: amt:Amet_0781 TRAP transporter, 4TM/12TM fusion protein; TRAP transporter, 4TM/12TM fusion protein 2285083 8738563 Acfer_2054 Acidaminococcus fermentans DSM 20731 TRAP transporter, 4TM/12TM fusion protein YP_003399714.1 2283155 R 591001 CDS YP_003399715.1 284049376 8738564 complement(2285106..2285657) 1 NC_013740.1 PFAM: Domain of unknown function DUF1850; KEGG: amt:Amet_0780 hypothetical protein; hypothetical protein 2285657 8738564 Acfer_2055 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399715.1 2285106 R 591001 CDS YP_003399716.1 284049377 8738565 complement(2285667..2286665) 1 NC_013740.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: amt:Amet_0779 TRAP transporter solute receptor TAXI family protein; TRAP transporter solute receptor, TAXI family 2286665 8738565 Acfer_2056 Acidaminococcus fermentans DSM 20731 TRAP transporter solute receptor, TAXI family YP_003399716.1 2285667 R 591001 CDS YP_003399717.1 284049378 8738567 complement(2287238..2288464) 1 NC_013740.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cpy:Cphy_3412 putative oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2288464 8738567 Acfer_2057 Acidaminococcus fermentans DSM 20731 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_003399717.1 2287238 R 591001 CDS YP_003399718.1 284049379 8738569 complement(2289338..2289649) 1 NC_013740.1 KEGG: ldb:Ldb0217 hypothetical protein; hypothetical protein 2289649 8738569 Acfer_2059 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399718.1 2289338 R 591001 CDS YP_003399719.1 284049380 8738570 2289816..2291234 1 NC_013740.1 PFAM: ATPase; DUF234 DEXX-box ATPase; KEGG: kol:Kole_0490 ATPase; ATPase 2291234 8738570 Acfer_2060 Acidaminococcus fermentans DSM 20731 ATPase YP_003399719.1 2289816 D 591001 CDS YP_003399720.1 284049381 8738571 2291443..2292444 1 NC_013740.1 KEGG: nth:Nther_2261 peptidase C26; glutamine amidotransferase-like protein 2292444 8738571 Acfer_2061 Acidaminococcus fermentans DSM 20731 glutamine amidotransferase-like protein YP_003399720.1 2291443 D 591001 CDS YP_003399721.1 284049382 8738572 complement(2292630..2293967) 1 NC_013740.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; KEGG: hmo:HM1_1310 RNA polymerase sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 2293967 8738572 Acfer_2062 Acidaminococcus fermentans DSM 20731 RNA polymerase sigma 54 subunit RpoN YP_003399721.1 2292630 R 591001 CDS YP_003399722.1 284049383 8738573 complement(2294079..2295263) 1 NC_013740.1 PFAM: aminotransferase class I and II; KEGG: shi:Shel_10650 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; class I and II aminotransferase 2295263 8738573 Acfer_2063 Acidaminococcus fermentans DSM 20731 class I and II aminotransferase YP_003399722.1 2294079 R 591001 CDS YP_003399723.1 284049384 8738574 complement(2295442..2296692) 1 NC_013740.1 KEGG: kpe:KPK_5051 putative transporter; putative transporter 2296692 8738574 Acfer_2064 Acidaminococcus fermentans DSM 20731 putative transporter YP_003399723.1 2295442 R 591001 CDS YP_003399724.1 284049385 8738575 2297015..2298010 1 NC_013740.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: hor:Hore_04570 transcriptional regulator, LacI family; transcriptional regulator, LacI family 2298010 8738575 Acfer_2065 Acidaminococcus fermentans DSM 20731 transcriptional regulator, LacI family YP_003399724.1 2297015 D 591001 CDS YP_003399725.1 284049386 8738576 complement(2298109..2299371) 1 NC_013740.1 KEGG: kpe:KPK_5051 putative transporter; putative transporter 2299371 8738576 Acfer_2066 Acidaminococcus fermentans DSM 20731 putative transporter YP_003399725.1 2298109 R 591001 CDS YP_003399726.1 284049387 8738577 complement(2299498..2300472) 1 NC_013740.1 PFAM: dihydrodipicolinate synthetase; KEGG: mta:Moth_0631 dihydrodipicolinate synthetase; dihydrodipicolinate synthetase 2300472 8738577 Acfer_2067 Acidaminococcus fermentans DSM 20731 dihydrodipicolinate synthetase YP_003399726.1 2299498 R 591001 CDS YP_003399727.1 284049388 8738578 2300786..2301757 1 NC_013740.1 PFAM: metallophosphoesterase; KEGG: bcm:Bcenmc03_6434 metallophosphoesterase; metallophosphoesterase 2301757 8738578 Acfer_2068 Acidaminococcus fermentans DSM 20731 metallophosphoesterase YP_003399727.1 2300786 D 591001 CDS YP_003399728.1 284049389 8738579 complement(2301950..2302531) 1 NC_013740.1 hypothetical protein 2302531 8738579 Acfer_2069 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399728.1 2301950 R 591001 CDS YP_003399729.1 284049390 8738581 complement(2303140..2303844) 1 NC_013740.1 PFAM: protein of unknown function DUF554; KEGG: hmo:HM1_0918 hypothetical protein; hypothetical protein 2303844 8738581 Acfer_2070 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399729.1 2303140 R 591001 CDS YP_003399730.1 284049391 8738582 complement(2303853..2304872) 1 NC_013740.1 KEGG: ooe:OEOE_0115 chromosome segregation DNA- binding protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 2304872 8738582 Acfer_2071 Acidaminococcus fermentans DSM 20731 parB-like partition protein YP_003399730.1 2303853 R 591001 CDS YP_003399731.1 284049392 8738583 complement(2304862..2305626) 1 NC_013740.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bay:RBAM_038080 hypothetical protein; Cobyrinic acid ac-diamide synthase 2305626 8738583 Acfer_2072 Acidaminococcus fermentans DSM 20731 Cobyrinic acid ac-diamide synthase YP_003399731.1 2304862 R 591001 CDS YP_003399732.1 284049393 8738584 complement(2305874..2307115) 1 NC_013740.1 KEGG: cno:NT01CX_0717 peptidase T; TIGRFAM: peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T 2307115 8738584 Acfer_2073 Acidaminococcus fermentans DSM 20731 peptidase T YP_003399732.1 2305874 R 591001 CDS YP_003399733.1 284049394 8738585 complement(2307319..2307750) 1 NC_013740.1 hypothetical protein 2307750 8738585 Acfer_2074 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399733.1 2307319 R 591001 CDS YP_003399734.1 284049395 8738586 complement(2307871..2308584) 1 NC_013740.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: ljo:LJ0554 16S rRNA methyltransferase GidB; methyltransferase GidB 2308584 8738586 Acfer_2075 Acidaminococcus fermentans DSM 20731 methyltransferase GidB YP_003399734.1 2307871 R 591001 CDS YP_003399735.1 284049396 8738587 complement(2308581..2310461) 1 NC_013740.1 TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; KEGG: drm:Dred_3323 tRNA uridine 5- carboxymethylaminomethyl modification enzyme GidA; glucose inhibited division protein A 2310461 8738587 Acfer_2076 Acidaminococcus fermentans DSM 20731 glucose inhibited division protein A YP_003399735.1 2308581 R 591001 CDS YP_003399736.1 284049397 8738588 complement(2310479..2311852) 1 NC_013740.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP- binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; KEGG: pth:PTH_2917 tRNA modification GTPase TrmE; tRNA modification GTPase TrmE 2311852 8738588 Acfer_2077 Acidaminococcus fermentans DSM 20731 tRNA modification GTPase TrmE YP_003399736.1 2310479 R 591001 CDS YP_003399737.1 284049398 8738589 complement(2312073..2312834) 1 NC_013740.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: eel:EUBELI_02066 spoIIIJ-associated protein; single-stranded nucleic acid binding R3H domain-containing protein 2312834 8738589 Acfer_2078 Acidaminococcus fermentans DSM 20731 single-stranded nucleic acid binding R3H domain-containing protein YP_003399737.1 2312073 R 591001 CDS YP_003399738.1 284049399 8738590 complement(2312878..2313501) 1 NC_013740.1 TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; KEGG: chy:CHY_0004 sporulation associated-membrane protein; YidC/Oxa1 family membrane protein insertase 2313501 8738590 Acfer_2079 Acidaminococcus fermentans DSM 20731 YidC/Oxa1 family membrane protein insertase YP_003399738.1 2312878 R 591001 CDS YP_003399739.1 284049400 8738591 complement(2313528..2313737) 1 NC_013740.1 PFAM: protein of unknown function DUF37; KEGG: fnu:FN0003 alpha-hemolysin; hypothetical protein 2313737 8738591 Acfer_2080 Acidaminococcus fermentans DSM 20731 hypothetical protein YP_003399739.1 2313528 R 591001 CDS YP_003399740.1 284049401 8738592 complement(2313753..2314091) 1 NC_013740.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: amt:Amet_4801 ribonuclease P protein component; ribonuclease P protein component 2314091 8738592 Acfer_2081 Acidaminococcus fermentans DSM 20731 ribonuclease P protein component YP_003399740.1 2313753 R 591001 CDS YP_003399741.1 284049402 8738593 complement(2314169..2314303) 1 NC_013740.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: bpy:Bphyt_3989 50S ribosomal protein L34; 50S ribosomal protein L34 2314303 8738593 Acfer_2082 Acidaminococcus fermentans DSM 20731 50S ribosomal protein L34 YP_003399741.1 2314169 R 591001 CDS YP_003399742.1 284049403 8738594 complement(2314445..2314921) 1 NC_013740.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: eel:EUBELI_20019 hypothetical protein; pyridoxamine 5'-phosphate oxidase-related FMN- binding protein 2314921 8738594 Acfer_2083 Acidaminococcus fermentans DSM 20731 pyridoxamine 5'-phosphate oxidase-related FMN- binding protein YP_003399742.1 2314445 R 591001 CDS YP_003399743.1 284049404 8738595 complement(2315000..2316412) 1 NC_013740.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bur:Bcep18194_C6529 peptidase M20D, amidohydrolase; amidohydrolase 2316412 8738595 Acfer_2084 Acidaminococcus fermentans DSM 20731 amidohydrolase YP_003399743.1 2315000 R 591001 CDS YP_003399744.1 284049405 8738596 complement(2316474..2317532) 1 NC_013740.1 PFAM: GTP-binding protein HSR1-related; KEGG: similar to immunity-related GTPase family, f1; GTP-binding protein HSR1-like protein 2317532 8738596 Acfer_2085 Acidaminococcus fermentans DSM 20731 GTP-binding protein HSR1-like protein YP_003399744.1 2316474 R 591001 CDS YP_003399745.1 284049406 8738597 complement(2317529..2318587) 1 NC_013740.1 PFAM: GTP-binding protein HSR1-related; KEGG: similar to LOC616722 protein; GTP-binding protein HSR1-like protein 2318587 8738597 Acfer_2086 Acidaminococcus fermentans DSM 20731 GTP-binding protein HSR1-like protein YP_003399745.1 2317529 R 591001 CDS YP_003399746.1 284049407 8738598 complement(2318601..2319545) 1 NC_013740.1 KEGG: cpy:Cphy_3413 L-asparaginase, type I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase 2319545 8738598 Acfer_2087 Acidaminococcus fermentans DSM 20731 type I L-asparaginase YP_003399746.1 2318601 R 591001 CDS YP_003399747.1 284049408 8738599 2319729..2320919 1 NC_013740.1 PFAM: peptidase M48 Ste24p; KEGG: Mitochondrial metalloendopeptidase OMA1, putative; peptidase M48 Ste24p 2320919 8738599 Acfer_2088 Acidaminococcus fermentans DSM 20731 peptidase M48 Ste24p YP_003399747.1 2319729 D 591001 CDS YP_003399748.1 284049409 8738600 complement(2321247..2322575) 1 NC_013740.1 TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: ele:Elen_2967 xanthine permease; xanthine permease 2322575 8738600 Acfer_2089 Acidaminococcus fermentans DSM 20731 xanthine permease YP_003399748.1 2321247 R 591001 CDS YP_003399749.1 284049410 8738601 complement(2322585..2323169) 1 NC_013740.1 TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: ele:Elen_2968 xanthine phosphoribosyltransferase; xanthine phosphoribosyltransferase 2323169 8738601 Acfer_2090 Acidaminococcus fermentans DSM 20731 xanthine phosphoribosyltransferase YP_003399749.1 2322585 R 591001 CDS YP_003399750.1 284049411 8738603 2323833..2328641 1 NC_013740.1 KEGG: ele:Elen_1086 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 2328641 8738603 Acfer_2091 Acidaminococcus fermentans DSM 20731 diguanylate cyclase/phosphodiesterase YP_003399750.1 2323833 D 591001 CDS YP_003399751.1 284049412 8738604 complement(2328741..2329472) 1 NC_013740.1 PFAM: peptidase C26; KEGG: lrl:LC705_01263 glutamine amidotransferase class-I:peptidase C26; peptidase C26 2329472 8738604 Acfer_2092 Acidaminococcus fermentans DSM 20731 peptidase C26 YP_003399751.1 2328741 R 591001 CDS