-- dump date 20140618_183456 -- class Genbank::CDS -- table cds_note -- id note YP_008379346.1 DNA-binding YP_008379348.1 Calcineurin-like phosphoesterase YP_008379349.1 Helix-turn-helix, AraC type YP_008379350.1 benzo_BadH: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase YP_008379351.1 putative FMN-linked N-ethylmaleimide reductase YP_008379352.1 putative H+-xyloside symporter YP_008379353.1 Major facilitator superfamily MFS-1 YP_008379354.1 Major facilitator superfamily MFS-1, Major Facilitator Superfamily, 2_A_01_02: Multidrug resistance protein YP_008379357.1 Aminotransferase, class I/II, Bacterial regulatory proteins, gntR family YP_008379360.1 Radical SAM superfamily YP_008379362.1 AIR synthase related protein YP_008379364.1 flavin-containing monooxygenase YP_008379372.1 Transcription regulator AsnC-type, C-terminal, AsnC family YP_008379374.1 Transcription regulator AbrB/SpoV, predicted YP_008379378.1 ROS/MUCR transcriptional regulator protein YP_008379385.1 Transposase, IS4-like, Transposase DDE domain YP_008379391.1 Rieske [2Fe-2S] iron-sulphur domain YP_008379393.1 Protein of unknown function DUF1852 YP_008379394.1 Methionine synthase, vitamin-B12 independent,Cobalamin-independent synthase, Catalytic domain YP_008379397.1 Integrase, catalytic core, Integrase core domain YP_008379399.1 Metallo-beta-lactamase superfamily YP_008379400.1 YCII-related YP_008379402.1 benzo_BadH: 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase YP_008379408.1 Transposase, IS4-like YP_008379409.1 Integrase, catalytic core, Integrase core domain YP_008379410.1 Transposase IS3/IS911 YP_008379417.1 Protein of unknown function (DUF497) YP_008379420.1 ROSMUCR transcriptional regulator YP_008379421.1 Integrase, catalytic core YP_008379422.1 Protein of unknown function DUF1486 YP_008379426.1 Protein of unknown function DUF1234 YP_008379427.1 Copper chaperone SCO1/SenC YP_008379428.1 PepSY-associated TM helix YP_008379432.1 lactoylglutathione lyase [EC:4.4.1.5],glyoxalase/bleomycin resistance protein/dioxygenase YP_008379434.1 Protein of unknown function DUF156, Uncharacterised BCR, COG1937 YP_008379435.1 2,5-didehydrogluconate reductase (EC:1.1.1.274),aldehyde reductase (EC:1.1.1.21) YP_008379438.2 Glyoxalase/bleomycin resistance protein/dioxygenase YP_008379439.1 Protein of unknown function DUF1486, SnoaL-like polyketide cyclase YP_008379440.2 [protein]-cysteine methyltransferase [EC:2.1.1.63]; transcriptional regulator, AraC family,Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding, 6-O-methylguanine DNA methyltransferase, DNA binding domain, ogt: methylated-DNA-[protein]-cysteine S-methyltransferase YP_008379441.2 Protein of unknown function DUF2086 YP_008379442.1 Protein of unknown function DUF2086 YP_008379448.1 Bacterial TniB, Bacterial TniB protein YP_008379453.1 AT hook, DNA-binding motif YP_008379461.1 Cobalamin (vitamin B12) biosynthesis CobW-like,CobW/HypB/UreG, nucleotide-binding domain, CobW: cobalamin biosynthesis protein CobW YP_008379465.2 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S),conserved domain, tRNA synthetase class II core domain (G,H, P, S and T) YP_008379469.1 PepSY-associated TM helix YP_008379471.1 Integrase, catalytic core YP_008379477.1 Transposase, IS4-like YP_008379486.1 Transcription regulator AbrB/SpoV, predicted YP_008379487.1 RelB antitoxin, RelB antitoxin YP_008379488.1 AT hook, DNA-binding motif YP_008379494.1 G8 domain YP_008379495.1 Transposase, IS4-like, Transposase DDE domain YP_008379499.2 ROSMUCR transcriptional regulator YP_008379501.1 Protein of unknown function DUF1173 YP_008379502.1 Lysine exporter protein (LYSE/YGGA) YP_008379511.1 BRO, N-terminal, BRO family, N-terminal domain YP_008379524.1 Primosome PriB/single-strand DNA-binding YP_008379525.1 Primosome PriB/single-strand DNA-binding YP_008379536.1 ROSMUCR transcriptional regulator YP_008379540.1 Protein of unknown function DUF497 YP_008379541.1 Helix-turn-helix type 3 YP_008379545.1 Plasmid encoded RepA protein, Plasmid encoded RepA protein YP_008379546.1 Integrase, catalytic core, phage YP_008379549.1 Heat shock protein Hsp20 YP_008379551.1 [acyl-carrier-protein] synthase II [EC:2.3.1.179]; putative 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.41) YP_008379555.1 UvrD/REP helicase, pcrA: ATP-dependent DNA helicase PcrA YP_008379556.1 Transposase, IS4-like, Transposase DDE domain YP_008379557.1 Polyketide cyclase / dehydrase and lipid transport YP_008379559.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008379561.1 Short-chain dehydrogenase/reductase SDR YP_008379562.1 Major facilitator superfamily MFS-1, Major Facilitator Superfamily YP_008379565.1 Glutathione S-transferase, N-terminal YP_008379569.1 Integrase, catalytic core, phage YP_008379580.1 Integrase, catalytic core, Integrase core domain YP_008379582.1 outer membrane protein YP_008379583.1 Transposase and inactivated derivatives YP_008390916.1 ABC transporter-like, ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit, ntrCD: nitrate ABC transporter, ATP-binding proteins C and D YP_008390918.1 tRNA synthetases class I (I, L, M and V) YP_008390920.1 Protein of unknown function DUF2497 YP_008390921.1 Outer membrane efflux protein YP_008390926.1 Short-chain dehydrogenase/reductase SDR YP_008390928.1 AIR synthase related protein YP_008390932.1 DR1885-like metal-binding protein YP_008390933.1 FGGY family of carbohydrate kinases, N-terminal domain YP_008390934.1 Major intrinsic protein, MIP: MIP family channel proteins YP_008390935.1 FAD dependent oxidoreductase YP_008390936.1 HTH transcriptional regulator, DeoR, Bacterial regulatory proteins, deoR family YP_008390937.1 DNA/RNA helicase, DEAD/DEAH box type, N-terminal,RQC domain YP_008390938.1 ABC transporter, transmembrane region, type 1 YP_008390939.1 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_008390941.1 RNA polymerase sigma-70 region 2, Sigma-70, region 4 YP_008390942.1 ECF subfamily RNA polymerase sigma-24 factor, RNA polymerase sigma factor 70, region 4 type 2, Sigma-70,region 4 YP_008390943.1 Signal transduction response regulator, receiver domain YP_008390944.1 ABC transporter-like, ABC transporter YP_008390945.1 Glycoside hydrolase, family 37 YP_008390948.1 stp: serine transporter YP_008390951.1 Amidohydrolase 1 YP_008390952.2 NMT1/THI5 like YP_008390953.2 Protein of unknown function DUF2165, transmembrane YP_008390954.1 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D YP_008390955.1 Binding-protein-dependent transport systems inner membrane component YP_008390956.2 2OG-Fe(II) oxygenase superfamily YP_008390957.1 Amidohydrolase 1 YP_008390958.1 TonB-dependent receptor, beta-barrel YP_008390959.2 Peptidase family M20/M25/M40 YP_008390960.2 Aminotransferase, class V/Cysteine desulfurase,PhnW-AepZ: 2-aminoethylphosphonate aminotransferase YP_008390964.1 XdhC- CoxI, xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC YP_008390965.1 Aldehyde oxidase/xanthine dehydrogenase,molybdopterin binding YP_008390966.1 Molybdopterin dehydrogenase, FAD-binding, FAD binding domain in molybdopterin dehydrogenase,xanthine_xdhA: xanthine dehydrogenase, small subunit YP_008390967.1 Xanthine/uracil/vitamin C permease YP_008390969.1 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, OHCU decarboxylase, UHCUDC: OHCU decarboxylase YP_008390970.1 Polysaccharide deacetylase, Polysaccharide deacetylase, uraD_N-term-dom: putative urate catabolism protein YP_008390971.1 Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal YP_008390972.1 LysR, substrate-binding YP_008390979.1 Selenoprotein W-related protein YP_008390980.1 Secretion protein HlyD YP_008390981.1 drrA: daunorubicin resistance ABC transporter,ATP-binding protein YP_008390984.1 LysR, substrate-binding YP_008390985.2 Uncharacterised protein family UPF0324, prokaryote,Conserved hypothetical protein 698, TIGR00698: conserved hypothetical protein YP_008390988.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008390989.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008390990.1 Lipase, secreted YP_008390991.1 Na+/H+ antiporter NhaA, Na+/H+ antiporter 1, NhaA: Na+/H+ antiporter NhaA YP_008390994.1 Helix-turn-helix, HxlR type, HxlR-like helix-turn-helix YP_008390995.1 catalase HPII YP_008390996.1 RF-1 domain YP_008390999.1 Amidohydrolase 1 YP_008391000.1 Amidohydrolase 1 YP_008391001.1 Phosphomethylpyrimidine kinase [EC:2.7.4.7],hydroxymethylpyrimidine kinase [EC:2.7.1.49] YP_008391003.1 TonB-dependent receptor, beta-barrel,TonB-siderophor: TonB-dependent siderophore receptor YP_008391004.1 ABC transporter, N-terminal, ABC transporter,3a01203: Peroxysomal long chain fatty acyl transporter YP_008391005.1 Protein of unknown function DUF72 YP_008391006.1 Protein of unknown function DUF159 YP_008391007.1 Heat shock protein 70 YP_008391009.1 Acriflavin resistance protein, AcrB/AcrD/AcrF family, 2A0601: heavy metal efflux pump, CzcA family YP_008391012.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008391013.2 Uncharacterized protein conserved in bacteria (DUF2252) YP_008391014.1 AsmA YP_008391015.1 Major facilitator superfamily MFS-1, 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family YP_008391016.1 Amidohydrolase 2, transcriptional regulator GntR YP_008391019.1 Helix-turn-helix, AraC type YP_008391020.1 YbaK/aminoacyl-tRNA synthetase-associated domain,YbaK / prolyl-tRNA synthetases associated domain YP_008391021.1 Major facilitator superfamily MFS-1 YP_008391023.1 tonB_Cterm: TonB family C-terminal domain YP_008391024.1 Biopolymer transport protein ExbD/TolR YP_008391025.1 MotA/TolQ/ExbB proton channel, exbB: tonB-system energizer ExbB YP_008391027.1 PepSY-associated TM helix YP_008391029.1 FecR protein YP_008391031.1 TonB-dependent receptor, beta-barrel YP_008391034.1 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_008391035.1 sulfonate/nitrate/taurine transport system ATP-binding protein YP_008391036.1 Binding-protein-dependent transport systems inner membrane component YP_008391037.1 Lipase, secreted YP_008391039.1 TonB-dependent receptor, beta-barrel YP_008391042.1 Major facilitator superfamily MFS-1, 2A0114: d-galactonate transporter YP_008391043.2 LysR, substrate-binding YP_008391044.2 Dihydroxy-acid/6-phosphogluconate dehydratase,Dehydratase family, ilvD: dihydroxy-acid dehydratase YP_008391045.1 HpcH/HpaI aldolase/citrate lyase family, GarL: 2-dehydro-3-deoxyglucarate aldolase YP_008391047.1 LysR, substrate-binding YP_008391048.2 Alcohol dehydrogenase, iron-type, lactal_redase: lactaldehyde reductase YP_008391049.1 Major facilitator superfamily MFS-1, 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein YP_008391051.1 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family YP_008391052.1 Binding-protein-dependent transport systems inner membrane component YP_008391053.1 K02049 sulfonate/nitrate/taurine transport system ATP-binding protein, ABC transporter, ntrCD: nitrate ABC transporter, ATP-binding proteins C and D YP_008391054.1 Transcription factor, NikR, nickel binding C-terminal, NikR C terminal nickel binding domain YP_008391055.1 Domain of unknown function DUF1989 YP_008391056.1 Domain of unknown function DUF1989 YP_008391057.1 Allophanate hydrolase subunit 2 YP_008391059.1 alpha/beta hydrolase fold YP_008391062.1 Acyl-CoA dehydrogenase, type 2, C-terminal YP_008391063.1 TonB-dependent receptor, beta-barrel,TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein YP_008391064.1 Haem oxygenase-like YP_008391065.2 Antibiotic biosynthesis monooxygenase YP_008391066.1 ABC transporter, ABC_phnC: phosphonate ABC transporter, ATP-binding protein YP_008391067.1 ABC transporter permease protein, FecCD transport family YP_008391069.1 Antibiotic biosynthesis monooxygenase YP_008391070.1 Iron dependent repressor, Iron dependent repressor,N-terminal DNA binding domain YP_008391071.1 Natural resistance-associated macrophage protein,nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family YP_008391074.2 putative membrane protein YP_008391077.1 alpha/beta hydrolase fold YP_008391078.1 Ammonium transporter, Ammonium Transporter Family,amt: ammonium transporter YP_008391080.1 Copper amine oxidase, C-terminal, Copper amine oxidase, enzyme domain YP_008391082.2 Cobalamin (vitamin B12) biosynthesis CobW-like,CobW/HypB/UreG, nucleotide-binding domain, CobW: cobalamin biosynthesis protein CobW YP_008391083.1 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_008391085.1 Helix-turn-helix, AraC type, Bacterial regulatory helix-turn-helix proteins, AraC family YP_008391086.1 Metallophosphoesterase, Calcineurin-like phosphoesterase YP_008391087.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008391088.1 Aldehyde oxidase/xanthine dehydrogenase,molybdopterin binding YP_008391089.1 molybdopterin dehydrogenase FAD-binding protein YP_008391092.1 ABC transporter, transmembrane domain, Peptidase C39 family, type_I_sec_HlyB: type I secretion system ATPase YP_008391093.2 Biotin/lipoyl attachment, transporter EamA,type_I_hlyD: type I secretion membrane fusion protein, HlyD family YP_008391097.1 Transposase, IS4-like YP_008391098.1 Major facilitator superfamily MFS-1, gph: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_008391101.1 TonB-dependent receptor, beta-barrel YP_008391104.1 Major facilitator superfamily MFS-1 YP_008391105.1 FAD dependent oxidoreductase YP_008391106.1 Luciferase-like, subgroup, alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent YP_008391107.1 flavin-dependent oxidoreductase YP_008391108.1 Acyl-CoA dehydrogenase, type 2, C-terminal YP_008391110.1 Nitroreductase-like, Nitroreductase family YP_008391112.1 TonB-dependent receptor, beta-barrel, TonB-dependent Receptor Plug Domain, TonB-siderophor: TonB-dependent siderophore receptor YP_008391114.1 DNA methylase, adenine-specific, N-6 DNA Methylase,hsdM: type I restriction-modification system, M subunit YP_008391116.1 Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal YP_008391117.1 Protein of unknown function DUF45 YP_008391119.1 Transposase, IS4-like YP_008391120.1 papain-like cysteine protease YP_008391121.1 ATPase, AAA-type, core, ATPase family associated with various cellular activities (AAA) YP_008391128.1 Methyltransferase type 11, Methyltransferase domain YP_008391133.1 transcriptional repressor YP_008391134.1 methyltransferase, FkbM family YP_008391139.1 Resolvase, N-terminal YP_008391141.1 ABC transporter YP_008391142.1 Sodium:dicarboxylate symporter YP_008391145.1 Major facilitator superfamily MFS-1, 2A0118: polyol permease YP_008391147.1 Cobalamin (vitamin B12) biosynthesis CbiD, CbiD,cbiD: cobalamin biosynthesis protein CbiD YP_008391149.1 Cobalamin (vitamin B12) biosynthesis CbiG, core YP_008391150.1 Tetrapyrrole methylase, CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit YP_008391152.1 Cobalamin (vitamin B12) biosynthesis CobK/CbiJ,precorrin-6x reductase YP_008391153.1 Tetrapyrrole methylase YP_008391154.1 Tetrapyrrole methylase, cobI_cbiL: precorrin-2 C20-methyltransferase YP_008391156.1 cobalamin(vitamin B12) biosynthesis protein precorrin-3B biosynthesis protein CobG, Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like,CobG: precorrin-3B synthase YP_008391158.1 Stress responsive alpha-beta barrel YP_008391161.1 Helix-turn-helix, Fis-type, Bacterial regulatory protein, Fis family YP_008391165.1 Protein of unknown function DUF1597 YP_008391166.1 Cation/H+ exchanger, Sodium/hydrogen exchanger family YP_008391171.1 Uncharacterised protein family UPF0118, Domain of unknown function DUF20 YP_008391172.1 AsmA family protein YP_008391173.1 Acetate/butyrate kinase YP_008391177.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase YP_008391179.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008391180.1 Protein of unknown function DUF204 YP_008391181.1 Glutathione S-transferase, C-terminal YP_008391182.1 FdhD/NarQ family, fdhD_narQ: formate dehydrogenase family accessory protein FdhD YP_008391185.1 MoeA, N-terminal and linker domain, MoeA N-terminal region (domain I and II), molyb_syn: molybdenum cofactor synthesis domain YP_008391186.1 Formate dehydrogenase accessory protein, Protein involved in formate dehydrogenase formation, FdhE: formate dehydrogenase accessory protein FdhE YP_008391188.1 Formate dehydrogenase, transmembrane YP_008391194.1 SirA-like, SirA-like protein, sirA; two component response regulator YP_008391197.1 geranylgeranyl pyrophosphate synthase YP_008391198.1 Transketolase-like, pyrimidine-binding domain, dxs: 1-deoxy-D-xylulose-5-phosphate synthase YP_008391199.1 tly: hemolysin TlyA family protein YP_008391201.1 ribosomal RNA large subunit methyltransferase N,Radical SAM YP_008391206.1 Protein of unknown function DUF1275 YP_008391219.1 Protein of unknown function DUF2313, Mu protein gp48 YP_008391220.1 Baseplate assembly protein J-like, predicted YP_008391221.1 Phage GP46 YP_008391222.1 Bacteriophage Mu Gp45, Bacteriophage Mu Gp45 protein YP_008391223.1 Bacteriophage Mu P protein YP_008391224.1 DNA circulation, N-terminal, DNA circulation protein N-terminus YP_008391227.1 putative bacteriophage protein YP_008391228.1 Tail tube protein, bacteriophage, Phage tail tube protein YP_008391229.1 Bacteriophage Mu tail sheath protein (GpL) YP_008391233.1 Phage major capsid protein E YP_008391236.1 Peptidase family S49 YP_008391239.1 Phage terminase GpA, Phage terminase large subunit (GpA) YP_008391244.1 Integrase, catalytic core, phage, Phage integrase family, recomb_XerC: tyrosine recombinase XerC YP_008391258.1 Helix-turn-helix type 3 YP_008391259.1 Prophage CP4-57 regulatory protein (AlpA) related YP_008391265.1 Integrase, catalytic core, phage YP_008391267.1 Signal transduction response regulator, receiver domain YP_008391268.1 YkuD domain YP_008391269.1 Cation/H+ exchanger, Sodium/hydrogen exchanger family YP_008391270.1 Fmu (Sun) domain protein, Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, NOL1/NOP2/sun family, rsmB: ribosomal RNA small subunit methyltransferase B YP_008391273.1 Bacterial extracellular solute-binding protein,family 5, dipeptide transporter substrate-binding periplasmic protein YP_008391274.1 Binding-protein-dependent transport systems inner membrane component, nickel_nikC: nickel ABC transporter,permease subunit NikC YP_008391275.1 Binding-protein-dependent transport systems inner membrane component, nickel_nikB: nickel ABC transporter,permease subunit NikB YP_008391276.1 ABC transporter-like, ABC transporter, nickel_nikD: nickel import ATP-binding protein NikD YP_008391277.1 ABC transporter-like, nickel_nikE: nickel import ATP-binding protein NikE YP_008391279.1 Phosphatidic acid phosphatase type 2/haloperoxidase YP_008391280.1 ribonuclease I, Ribonuclease T2 YP_008391281.1 Purine nucleoside permease, Purine nucleoside permease (NUP) YP_008391282.1 non-hemolytic phospholipase C, Phosphoesterase family, PC_PLC: phospholipase C, phosphocholine-specific YP_008391286.1 Tannase/feruloyl esterase YP_008391287.1 Major facilitator superfamily MFS-1, efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-1 (14 Spanner) (DHA2) family YP_008391289.1 Siderophore-interacting FAD-binding domain YP_008391293.1 TonB-dependent receptor, beta-barrel, TonB dependent receptor YP_008391297.1 Fusaric acid resistance protein, conserved region YP_008391298.1 Outer membrane efflux protein, type_I_sec_TolC: type I secretion outer membrane protein, TolC family YP_008391299.1 methyltransferase or Fe-S oxidoreductase, Radical SAM YP_008391300.1 putative membrane protein YP_008391302.1 TonB-dependent receptor, beta-barrel YP_008391308.1 Bacterial Cytochrome Ubiquinol Oxidase YP_008391310.1 ABC transporter, transmembrane domain, ABC transporter, CydD: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD YP_008391311.1 2OG-Fe(II) oxygenase, Oxoglutarate/iron-dependent oxygenase YP_008391313.1 Sel1-like YP_008391317.1 Aminotransferase, class I/II YP_008391318.1 Predicted Permease Membrane Region YP_008391319.1 Transposase, IS204/IS1001/IS1096/IS1165,Transposase YP_008391321.1 Transposase (putative), IS66 Orf2 like, IS66 Orf2 like protein YP_008391322.1 Transposase, IS66, Transposase IS66 family YP_008391323.1 Glycosyl transferase, family 2 YP_008391324.1 N-acetylglucosaminyl phosphatidylinositol deacetylase, GlcNAc-PI de-N-acetylase YP_008391327.1 ABC transporter-like YP_008391328.1 LysR, substrate-binding YP_008391330.1 TonB-dependent receptor, beta-barrel YP_008391332.1 Protein of unknown function DUF1348 YP_008391333.1 Protein of unknown function DUF892 YP_008391334.1 Histidine phosphatase superfamily, clade-1 YP_008391335.1 MgtC/SapB transporter, MgtC family YP_008391337.1 Protein of unknown function DUF1275 YP_008391338.1 CoA-transferase family III YP_008391339.1 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain YP_008391340.1 CoA-transferase family III YP_008391342.1 Short-chain dehydrogenase/reductase SDR YP_008391343.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008391344.1 short-chain dehydrogenase/reductase SDR YP_008391345.1 Polyketide cyclase / dehydrase and lipid transport YP_008391347.1 Major facilitator superfamily MFS-1, Multidrug resistance protein domain YP_008391348.1 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I, Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_008391349.1 Bacterial transferase hexapeptide repeat YP_008391350.1 Protein of unknown function DUF1349 YP_008391352.1 LysR, substrate-binding YP_008391353.1 TonB-dependent receptor, beta-barrel YP_008391354.1 PepSY-associated TM helix YP_008391355.1 TonB-dependent receptor, beta-barrel, TonB-dependent Receptor Plug Domain, TonB-siderophor: TonB-dependent siderophore receptor YP_008391356.1 FecR protein, FecR protein YP_008391357.1 RNA polymerase sigma-70 region 2, Sigma-70 region 2,sigma70-ECF: RNA polymerase sigma factor, sigma-70 family YP_008391359.1 Protein of unknown function DUF125, transmembrane,Integral membrane protein DUF125 YP_008391360.1 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase, cztS_silS_copS: heavy metal sensor kinase YP_008391361.1 Signal transduction response regulator, receiver domain YP_008391362.1 Acriflavin resistance protein, AcrB/AcrD/AcrF family, 2A0601: heavy metal efflux pump, CzcA family YP_008391363.1 Secretion protein HlyD, RND_mfp: efflux transporter,RND family, MFP subunit YP_008391364.1 Outer membrane efflux protein YP_008391369.1 Phosphopantetheine-binding domain YP_008391370.1 Aminotransferase class I and II YP_008391372.1 Diacylglycerol kinase, catalytic domain YP_008391373.1 Calcineurin-like phosphoesterase YP_008391374.1 K07091 lipopolysaccharide export system permease protein, Permease YjgP/YjgQ, predicted, Predicted permease YjgP/YjgQ family YP_008391375.1 Permease YjgP/YjgQ, predicted, Predicted permease YjgP/YjgQ family YP_008391378.1 haloacid dehalogenase-like hydrolase, PGP_bact: phosphoglycolate phosphatase, bacterial YP_008391380.1 Glutamine amidotransferase, class-II YP_008391382.1 Transcription regulator IclR, C-terminal, IclR helix-turn-helix domain YP_008391384.1 ABC transporter-like, ABC transporter, LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein YP_008391385.1 Protein of unknown function DUF214, permase predicted, lolCE: lipoprotein releasing system,transmembrane protein, LolC/E family YP_008391386.1 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S),conserved domain, tRNA synthetase class II core domain (G,H, P, S and T), proS_fam_II: prolyl-tRNA synthetase YP_008391387.1 RNA-metabolising metallo-beta-lactamase,Metallo-beta-lactamase superfamily, MG423: conserved hypothetical protein YP_008391388.1 transcriptional activator Baf, Bordetella pertussis Bvg accessory factor, Bordetella pertussis Bvg accessory factor family, baf: pantothenate kinase, type III YP_008391389.1 Biotin/lipoate A/B protein ligase, Biotin/lipoate A/B protein ligase family, BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase YP_008391390.1 NADH:ubiquinone/plastoquinone oxidoreductase,NADH-Ubiquinone/plastoquinone (complex I), various chains,NDH_I_N: proton-translocating NADH-quinone oxidoreductase,chain N, K00343 NADH dehydrogenase I subunit N YP_008391391.1 NADH:ubiquinone/plastoquinone oxidoreductase,NADH-Ubiquinone/plastoquinone (complex I), various chains,NDH_I_L: proton-translocating NADH-quinone oxidoreductase,chain L, K00341 NADH dehydrogenase I subunit L YP_008391392.1 K00340 NADH dehydrogenase I subunit K,NADH:ubiquinone/quinone oxidoreductase, chain 4L,NADH-ubiquinone/plastoquinone oxidoreductase chain 4L YP_008391393.1 K00339 NADH dehydrogenase I subunit J,NADH:ubiquinone/plastoquinone oxidoreductase, chain 6,NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_008391394.1 K00338 NADH dehydrogenase I subunit I , 4Fe-4S binding domain, NuoI: NADH-quinone oxidoreductase, chain I YP_008391395.1 K00337 NADH dehydrogenase I subunit H ,NADH:ubiquinone oxidoreductase, subunit 1, NADH dehydrogenase YP_008391396.1 K00336 NADH dehydrogenase I subunit G ,Molybdopterin oxidoreductase, Molybdopterin oxidoreductase,NuoG: NADH dehydrogenase (quinone), G subunit YP_008391398.1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit,NuoD: NADH dehydrogenase (quinone), D subunit, K00333 NADH dehydrogenase I subunit D YP_008391399.1 K00332 NADH dehydrogenase I subunit C,NADH:ubiquinone oxidoreductase, 30kDa subunit,Respiratory-chain NADH dehydrogenase, 30 Kd subunit,NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C YP_008391400.1 K00331 NADH dehydrogenase I subunit B,NADH:ubiquinone oxidoreductase-like, 20kDa subunit,nuoB_fam: NADH-quinone oxidoreductase, B subunit YP_008391401.1 K00330 NADH dehydrogenase I subunit A,NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YP_008391403.1 Histone-like bacterial DNA-binding protein,Bacterial DNA-binding protein, himA: integration host factor, alpha subunit YP_008391404.1 Peptidase S16, Lon C-terminal, Lon protease (S16) C-terminal proteolytic domain, lon: ATP-dependent protease La YP_008391405.1 ATPase, AAA-2, ATPase family associated with various cellular activities (AAA), clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX YP_008391406.2 Peptidase S14, ClpP, Clp protease, clpP: ATP-dependent Clp protease, proteolytic subunit ClpP YP_008391407.1 Trigger factor, C-terminal, bacterial YP_008391408.1 Uncharacterised protein family, carbohydrate kinase-related, YjeF-related protein N-terminus,yjeF_nterm: YjeF homolog, N-terminus YP_008391410.1 DNA/RNA helicase, DEAD/DEAH box type, N-terminal,DEAD/DEAH box helicase YP_008391411.1 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA YP_008391412.1 FeS cluster biogenesis, Iron-sulphur cluster biosynthesis, TIGR00049: iron-sulfur cluster assembly accessory protein YP_008391413.1 Protein of unknown function DUF59 YP_008391414.1 NIF system FeS cluster assembly, NifU, N-terminal,SUF_scaf_2: SUF system FeS assembly protein, NifU family YP_008391415.1 Aminotransferase, class V/Cysteine desulfurase,Aminotransferase class-V, sufS: cysteine desulfurase, SufS subfamily YP_008391416.1 SUF system FeS cluster assembly, SufBD,Uncharacterized protein family (UPF0051), sufD: FeS assembly protein SufD YP_008391417.1 ABC transporter-like, ABC transporter, sufC: FeS assembly ATPase SufC YP_008391418.1 SUF system FeS cluster assembly, SufBD YP_008391419.1 Transcription regulator Rrf2, FeS assembly SUF system regulator YP_008391420.1 Protein of unknown function DUF445, transmembrane YP_008391423.1 Alpha/beta hydrolase fold-1 YP_008391424.1 Protein synthesis factor, GTP-binding, Elongation factor Tu GTP binding domain, EF-G: translation elongation factor G YP_008391425.1 Ribosomal protein L28 YP_008391427.1 ABC transporter, transmembrane domain, lipid A export permease/ATP-binding protein MsbA YP_008391428.1 NUDIX hydrolase domain YP_008391429.1 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase, GlnD PII-uridylyltransferase YP_008391430.1 MutS domain V YP_008391431.1 Tetratricopeptide TPR2 YP_008391432.1 Peptidase M32, carboxypeptidase Taq metallopeptidase, Carboxypeptidase Taq (M32) metallopeptidase YP_008391434.1 Pyridoxal phosphate-dependent enzyme, beta subunit YP_008391435.1 Peptidase M16, C-terminal, Insulinase (Peptidase family M16) YP_008391436.1 Peptidase U62, modulator of DNA gyrase, Putative modulator of DNA gyrase YP_008391437.1 Mitochondrial inner membrane translocase complex,subunit Tim44-related YP_008391451.1 LysR, substrate-binding, LysR substrate binding domain, chol_sulf_TF: putative choline sulfate-utilization transcription factor YP_008391452.1 ROS/MUCR transcriptional regulator protein YP_008391454.1 phage SPO1 DNA polymerase-related protein,Uracil-DNA glycosylase-like, Uracil DNA glycosylase superfamily, uracil-DNA glycosylase, family 4 YP_008391455.1 Flagellin assembly, membrane protein MviN, virulence factor YP_008391457.2 Uncharacterised protein family UPF0118, Domain of unknown function DUF20 YP_008391458.1 Procyclic acidic repetitive YP_008391459.1 Histone-like bacterial DNA-binding protein, himA: integration host factor, alpha subunit YP_008391460.1 [acyl-carrier-protein] synthase III [EC:2.3.1.180] YP_008391463.1 Protein of unknown function DUF177 YP_008391464.1 SmpA/OmlA YP_008391465.2 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase YP_008391467.1 HTH transcriptional regulator, MarR, MarR family YP_008391468.1 COQ9 YP_008391469.1 Formylmethionine deformylase YP_008391471.1 Isocitrate/isopropylmalate dehydrogenase YP_008391474.1 Ribosomal protein L19 YP_008391476.1 RimM protein, 16S_RimM: 16S rRNA processing protein RimM YP_008391478.1 Signal recognition particle, SRP54 subunit, GTPase,SRP54-type protein, GTPase domain YP_008391480.1 ATP12, ATPase F1F0-assembly protein, ATP12 chaperone protein YP_008391482.1 Pseudouridine synthase, RsuA and RluB/C/D/E/F, RNA pseudouridylate synthase, rluA_subfam: pseudouridine synthase, RluA family YP_008391483.1 ATPase, AAA-type, core, ATPase family associated with various cellular activities (AAA) YP_008391486.1 Ribosomal RNA small subunit methyltransferase E, RNA methyltransferase, TIGR00046: RNA methyltransferase, RsmE family YP_008391487.1 Glutamate--cysteine ligase, GCS2, Glutamate-cysteine ligase family 2(GCS2), glu_cys_lig_pln: glutamate--cysteine ligase YP_008391488.1 Major facilitator superfamily MFS-1 YP_008391490.1 GTP-binding protein, HSR1-related, GTPase of unknown function, GTPase_EngA: ribosome-associated GTPase EngA YP_008391491.1 Pyrrolo-quinoline quinone repeat YP_008391494.1 Glycosyl transferase, family 9 YP_008391496.1 Asparagine synthase, asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) YP_008391497.1 Glycine cleavage T-protein, N-terminal,ygfZ_signature: folate-binding protein YgfZ YP_008391499.1 lipid-A-disaccharide synthase, Glycosyl transferase,family 19 YP_008391501.1 Ferric reductase like transmembrane component YP_008391502.1 6-phosphogluconate dehydrogenase, NAD-binding YP_008391504.1 Manganese/iron superoxide dismutase YP_008391505.1 protein disaggregation chaperone, ATPase, AAA-type,core, ATPase family associated with various cellular activities (AAA), chaperone_ClpB: ATP-dependent chaperone ClpB YP_008391506.1 NUDIX hydrolase domain YP_008391507.1 GTP-binding protein, HSR1-related, GTPase of unknown function, GTP_HflX: GTP-binding protein HflX YP_008391508.1 Like-Sm ribonucleoprotein (LSM) domain, Hfq: RNA chaperone Hfq YP_008391509.1 RNA polymerase sigma factor 54, interaction,Sigma-54 interaction domain, ntrC: nitrogen regulation protein NR(I) YP_008391510.1 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase, phoR_proteo: phosphate regulon sensor kinase PhoR YP_008391511.1 RNA polymerase sigma factor 54, interaction YP_008391512.1 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase YP_008391519.1 UDP-GALP_mutase: UDP-galactopyranose mutase YP_008391521.1 Integrase, catalytic core, phage, Phage integrase family YP_008391522.1 CDS YP_008391541.1 Nitrogen regulatory protein PII YP_008391542.1 Serine acetyltransferase YP_008391543.1 FAD dependent oxidoreductase, FAD binding domain YP_008391544.1 SNARE associated Golgi protein YP_008391547.1 Integrase, catalytic core, phage, Phage integrase family YP_008391548.1 Translation elongation factor, KOW-like YP_008391549.1 Inositol monophosphatase YP_008391551.1 Cold-shock protein, DNA-binding, 'Cold-shock' DNA-binding domain, cspD: cold shock domain protein CspD YP_008391552.1 Dienelactone hydrolase YP_008391553.2 Chaperonin Cpn10, Chaperonin 10 Kd subunit YP_008391554.1 Chaperonin Cpn60/TCP-1, TCP-1/cpn60 chaperonin family, GroEL: chaperonin GroL YP_008391555.1 FkbH: FkbH domain YP_008391556.1 Haloacid dehalogenase-like hydrolase, FkbH: FkbH domain YP_008391562.1 Transposase, IS4-like YP_008391564.1 Glycosyl transferase, group 1 YP_008391565.1 Transposase, IS4-like YP_008391566.1 Transposase, IS4-like YP_008391567.1 Ammonium transporter YP_008391570.1 alpha/beta hydrolase fold, pro_imino_pep_1: proline iminopeptidase YP_008391571.1 Integrase, catalytic core, phage, Phage integrase family, recomb_XerC: tyrosine recombinase XerC YP_008391572.1 DNA/RNA helicase, DEAD/DEAH box type, N-terminal YP_008391574.1 Protein of unknown function DUF815 YP_008391575.1 Transposase, probable, IS891/IS1136/IS1341, Putative transposase DNA-binding domain YP_008391576.1 Transposase, probable, IS891/IS1136/IS1341 YP_008391577.1 Rieske [2Fe-2S] iron-sulphur domain, Rieske [2Fe-2S] domain YP_008391578.1 K03574 7,8-dihydro-8-oxoguanine triphosphatase,NUDIX hydrolase domain, NUDIX domain, mutt: mutator mutT protein YP_008391580.1 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_008391581.1 ApaG, Protein of unknown function (DUF525) YP_008391582.1 GTP cyclohydrolase I/Nitrile oxidoreductase, GTP cyclohydrolase I, folE: GTP cyclohydrolase I YP_008391583.1 ThiJ/PfpI, DJ-1/PfpI family, PfpI: intracellular protease, PfpI family YP_008391584.1 Molybdopterin binding, Probable molybdopterin binding domain YP_008391585.1 Carbohydrate-selective porin OprB,Carbohydrate-selective porin, OprB family YP_008391587.1 Metallophosphoesterase YP_008391588.1 Transposase, probable, IS891/IS1136/IS1341, Probable transposase YP_008391590.1 Protein of unknown function DUF1656 YP_008391591.1 Secretion protein HlyD, HlyD family secretion protein, 8a0101: efflux pump membrane protein YP_008391594.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_008391596.1 HpnL: putative membrane protein YP_008391602.1 Cytochrome b/b6, N-terminal, Cytochrome b(N-terminal)/b6/petB YP_008391604.1 Rieske [2Fe-2S] iron-sulphur domain YP_008391607.1 Protein of unknown function DUF1597 YP_008391611.1 alpha/beta hydrolase fold YP_008391613.1 Ribosomal protein L21 YP_008391614.1 Ribosomal protein L27 YP_008391616.1 Aspartate/glutamate/uridylate kinase, Amino acid kinase family YP_008391618.1 Protein of unknown function DUF2312 YP_008391621.1 alpha/beta hydrolase fold YP_008391622.1 MraZ domain YP_008391625.1 Penicillin binding protein transpeptidase domain,spoVD_pbp: stage V sporulation protein D YP_008391626.1 Mur ligase middle domain, murE: UDP-N-acetylmuramyl-tripeptide synthetases YP_008391627.1 Mur ligase, central YP_008391628.2 Glycosyl transferase family 4 YP_008391629.1 Mur ligase, central, Mur ligase middle domain YP_008391630.1 Cell cycle protein YP_008391631.1 Glycosyltransferase family 28 C-terminal domain,murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_008391632.1 FAD linked oxidase, N-terminal YP_008391636.1 Tubulin/FtsZ, GTPase domain YP_008391638.1 Tetratricopeptide TPR2, OM_YfiO: outer membrane assembly lipoprotein YfiO YP_008391639.1 RecF/RecN/SMC protein, N-terminal YP_008391642.1 Protein of unknown function DUF299,phosphotransferase, predicted YP_008391644.1 Uncharacterised protein family UPF0029, Impact,N-terminal, TIGR00257: conserved hypothetical protein TIGR00257 YP_008391647.1 DAHP synthetase, class II YP_008391650.1 Glutamyl/glutaminyl-tRNA synthetase, class Ic,catalytic domain, tRNA synthetases class I (E and Q),catalytic domain YP_008391653.1 Haloacid dehalogenase-like hydrolase YP_008391654.1 ATPase, P-type, ATPase-associated domain, E1-E2 ATPase YP_008391656.1 Multicopper oxidase, type 1, copper_res_A: copper-resistance protein, CopA family YP_008391658.1 Acetohydroxy acid isomeroreductase, catalytic YP_008391661.1 tRNA isopentenyltransferase YP_008391664.1 Protein of unknown function DUF1022 YP_008391665.1 DEAD/DEAH box helicase YP_008391667.1 Glycosyl transferase, group 1 YP_008391668.1 Succinylglutamate desuccinylase/aspartoacylase YP_008391672.1 Tetrapyrrole biosynthesis, porphobilinogen synthase YP_008391673.1 Arginine-tRNA-protein transferase, C-terminal YP_008391677.1 Ribosomal protein S2 YP_008391678.1 Rieske [2Fe-2S] iron-sulphur domain, Rieske [2Fe-2S] domain YP_008391679.1 Aminotransferase, class IV, aminodeoxychorismate lyase YP_008391683.1 putative endoribonuclease L-PSP YP_008391686.1 aminotransferase class I and II YP_008391687.1 tRNA synthetases class I (E and Q), catalytic domain YP_008391690.1 Heavy metal transport/detoxification protein,Heavy-metal-associated domain YP_008391692.1 Radical SAM superfamily YP_008391694.1 ABC transporter-like YP_008391695.1 Domain of unknown function DUF20 YP_008391696.1 Signal transduction response regulator, receiver domain, heavy metal response regulator YP_008391697.1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_008391698.1 Protein of unknown function DUF541 YP_008391699.1 Translation initiation factor 3, C-terminal,Translation initiation factor IF-3, C-terminal domain YP_008391701.1 Glycosyltransferase family 9 (heptosyltransferase) YP_008391702.2 Tetratricopeptide TPR2 YP_008391704.1 ATP-NAD/AcoX kinase YP_008391709.2 LytB protein YP_008391713.1 Peptidase M3A/M3B, thimet/oligopeptidase F,Peptidase family M3 YP_008391717.1 Protein of unknown function DUF6, transmembrane YP_008391718.1 Cell wall hydrolase/autolysin, catalytic YP_008391725.1 Uncharacterised protein family, zinc-binding, Domain of unknown function (DUF329) YP_008391727.1 Cytochrome c, class I YP_008391729.1 short-chain dehydrogenase/reductase SDR YP_008391731.1 putative NAD-dependent YP_008391732.1 Uncharacterised conserved protein UCP012641,Uncharacterized protein conserved in bacteria (DUF2248) YP_008391734.1 Protein of unknown function DUF404 YP_008391735.1 Protein of unknown function DUF403 YP_008391736.1 Quinolinate phosphoribosyl transferase, C-terminal domain YP_008391739.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008391744.1 Protein of unknown function DUF336 YP_008391745.1 yieF;NADPH-dependent FMN reductase YP_008391746.1 Pirin, N-terminal, Pirin YP_008391747.2 LysR, substrate-binding YP_008391752.1 TonB-dependent receptor, beta-barrel, TonB-dependent Receptor Plug Domain YP_008391753.1 Major facilitator superfamily MFS-1 YP_008391754.2 Protein of unknown function DUF6, transmembrane YP_008391755.1 LamB/YcsF, LamB/YcsF family YP_008391756.1 Allophanate hydrolase subunit 2 YP_008391758.1 short chain dehydrogenase/reductase family oxidoreductase YP_008391759.1 Biotin/lipoyl attachment YP_008391761.1 Biotin/lipoyl attachment YP_008391762.1 Aminotransferase, class I/II YP_008391763.1 LysR, substrate-binding YP_008391765.1 Transposase, IS4-like, Transposase DDE domain YP_008391766.1 short chain dehydrogenase YP_008391768.1 Glycosyl hydrolase, family 13, catalytic domain,Alpha amylase, catalytic domain YP_008391769.1 Alpha-amylase, C-terminal all beta YP_008391771.1 Glycosyl hydrolase, family 13, catalytic domain YP_008391775.1 Ubiquinone biosynthesis hydroxylase,UbiH/UbiF/VisC/COQ6 family YP_008391776.1 Copper chaperone SCO1/SenC, SCO1/SenC YP_008391781.1 NUDIX hydrolase domain YP_008391782.1 LysR, substrate-binding YP_008391785.1 alpha/beta hydrolase fold YP_008391787.1 Zinc finger, CHCC-type YP_008391789.1 Small multidrug resistance protein YP_008391792.1 tatB: twin arginine-targeting protein translocase TatB YP_008391797.1 Metal-dependent phosphohydrolase, HD subdomain YP_008391798.1 FeS cluster biogenesis YP_008391800.1 Glycosyl transferase, family 2 YP_008391801.1 Protein of unknown function DUF1022 YP_008391802.1 Polysaccharide biosynthesis protein YP_008391803.1 CDS YP_008391804.2 PQQ_syn_pqqB: coenzyme PQQ biosynthesis protein B YP_008391807.1 Radical SAM YP_008391814.1 Phosphoesterase, RecJ-like, DHH family YP_008391815.1 RNA polymerase sigma-70 region 2 YP_008391816.1 Pseudouridine synthase, RsuA and RluB/C/D/E/F, RNA pseudouridylate synthase YP_008391817.1 ABC transporter permease protein, FecCD transport family YP_008391818.1 ABC transporter-like, ABC transporter YP_008391819.1 Uncharacterised protein family UPF0061 YP_008391820.1 Aminotransferase, class IV YP_008391823.1 Copper chaperone SCO1/SenC YP_008391824.1 Phospholipid/glycerol acyltransferase YP_008391828.1 cyanide insensitive terminal oxidase YP_008391830.1 Dyp-type peroxidase YP_008391832.1 Amino acid permease domain, GABAperm: GABA permease YP_008391834.1 glucose dehydrogenase, methanol dehydrogenase subunit 1, PQQ-dependent enzyme, N-terminal,Pyrrolo-quinoline quinone coenzyme N-terminus YP_008391836.1 Transposase, IS4-like, Transposase DDE domain YP_008391839.1 Aminotransferase class-III, bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase YP_008391841.1 Peptidase M20 YP_008391842.1 Dihydroorotate dehydrogenase, class 1/ 2 YP_008391846.1 Amidohydrolase 1 YP_008391847.1 Permease, cytosine/purines, uracil, thiamine,allantoin YP_008391848.1 Transcription regulator YcdC, C-terminal, TetR family transcriptional regulator YP_008391849.1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_008391852.1 Bacterial protein export chaperone SecB YP_008391854.1 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase YP_008391855.1 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ YP_008391860.1 Sodium/solute symporter YP_008391865.1 Helix-turn-helix type 3 YP_008391866.1 Oxidoreductase FAD/NAD(P)-binding YP_008391869.1 NLPA lipoprotein YP_008391870.1 FAD-linked oxidase YP_008391872.1 alpha/beta hydrolase fold YP_008391873.1 HTH transcriptional regulator, MarR YP_008391876.1 Class II aldolase/adducin, N-terminal YP_008391878.1 Oxidoreductase FAD/NAD(P)-binding, 2Fe-2S iron-sulfur cluster binding domain YP_008391879.1 Short-chain dehydrogenase/reductase SDR YP_008391881.1 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal YP_008391885.1 Aldehyde dehydrogenase YP_008391886.1 PQQ-dependent enzyme, pyrrolo-quinoline quinone YP_008391887.1 Major facilitator superfamily MFS-1 YP_008391889.1 LysR, substrate-binding YP_008391890.1 Binding-protein-dependent transport systems inner membrane component YP_008391891.1 Binding-protein-dependent transport systems inner membrane component YP_008391892.1 Bacterial extracellular solute-binding, family 1 YP_008391894.1 Aldehyde dehydrogenase YP_008391896.1 Protein of unknown function DUF1597 YP_008391899.1 Sel1-like YP_008391901.1 MotA/TolQ/ExbB proton channel YP_008391904.1 LysR, substrate-binding YP_008391910.1 Protein of unknown function DUF2147 YP_008391912.1 FAD dependent oxidoreductase YP_008391913.1 Cytochrome c, class I YP_008391914.1 NAD dependent YP_008391918.1 Cobalamin (vitamin B12) biosynthesis CobS YP_008391923.1 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR YP_008391924.1 Histidine phosphatase superfamily, clade-1 YP_008391925.1 cobB: cobyrinic acid a,c-diamide synthase YP_008391926.1 CobN/magnesium chelatase YP_008391927.1 CobW/HypB/UreG, nucleotide-binding domain YP_008391928.1 Protein of unknown function DUF1636 YP_008391930.1 Fusaric acid resistance protein, conserved region YP_008391931.1 GPR1/FUN34/yaaH YP_008391933.1 Flavin reductase-like, FMN-binding, RutF: pyrimidine utilization flavin reductase protein F YP_008391935.1 ABC 3 transport family YP_008391937.2 ABC transporter metal-binding lipoprotein YP_008391938.1 Ferric-uptake regulator YP_008391941.1 Initiation factor 2B related YP_008391942.2 YbaK/aminoacyl-tRNA synthetase-associated domain YP_008391943.1 Protein of unknown function DUF2272 YP_008391944.1 cysteine synthase A (O-acetylserine sulfhydrylase A) protein, Pyridoxal phosphate-dependent enzyme, beta subunit YP_008391945.1 GMP synthase, Glutamine amidotransferase class-I,C-terminal YP_008391948.1 General substrate transporter, Sugar (and other) transporter, SP: MFS transporter, sugar porter (SP) family YP_008391949.1 Lytic transglycosylase-like, catalytic YP_008391950.1 L-lactate permease YP_008391952.1 NAD-dependent epimerase/dehydratase YP_008391953.1 Prolipoprotein diacylglyceryl transferase YP_008391954.1 Protein of unknown function DUF185, Uncharacterized ACR, COG1565 YP_008391955.1 Multi-copper polyphenol oxidoreductase, laccase,conserved hypothetical protein TIGR00726 YP_008391957.1 Lytic transglycosylase-like, catalytic,Transglycosylase SLT domain YP_008391959.1 ABC transporter-like, ABC transporter YP_008391960.1 Uncharacterised protein family UPF0060,Uncharacterised BCR, YnfA/UPF0060 family YP_008391961.1 Mg2+ transporter protein, CorA-like YP_008391964.1 Aminotransferase, class I/II YP_008391965.1 Ankyrin repeat YP_008391966.1 transketolase YP_008391968.2 6-phosphogluconate dehydrogenase, NAD-binding YP_008391969.1 HAD superfamily hydrolase-like, type 3, haloacid dehalogenase-like hydrolase YP_008391970.1 Glucosamine/galactosamine-6-phosphate isomerase YP_008391972.1 Shikimate kinase YP_008391977.1 Alcohol dehydrogenase, zinc-binding, Zinc-binding dehydrogenase, putative NAD(P)H quinone oxidoreductase,PIG3 family YP_008391978.1 Alanine racemase, N-terminal YP_008391979.1 K+ potassium transporter, potassium uptake protein YP_008391981.1 Uncharacterised conserved protein UCP032025, Protein of unknown function (DUF1489) YP_008391984.1 ABC transporter-like, urea ABC transporter,ATP-binding protein UrtD YP_008391985.1 Bacterial inner-membrane translocator,Branched-chain amino acid transport system / permease component, urea ABC transporter, permease protein UrtC YP_008391986.1 Bacterial inner-membrane translocator,Branched-chain amino acid transport system / permease component, urea ABC transporter, permease protein UrtB YP_008391987.1 urea ABC transporter, urea binding protein YP_008391989.1 Signal transduction response regulator, receiver domain, Response regulator receiver domain YP_008391995.1 urease subunit alpha, Amidohydrolase 1 YP_008391998.1 Urease accessory protein UreD YP_008392000.1 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain, indolepyruvate decarboxylase YP_008392005.1 Arsenate reductase-like, ArsC family, arsC_related: conserved hypothetical protein YP_008392007.1 Methyladenine glycosylase YP_008392008.1 HTH transcriptional regulator, ArsR YP_008392009.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen, AhpC/TSA family YP_008392010.1 Metallo-beta-lactamase superfamily YP_008392011.1 Protein of unknown function DUF81 YP_008392013.1 glutaredoxin family YP_008392015.1 Outer membrane efflux protein YP_008392016.1 Secretion protein HlyD YP_008392017.1 Major facilitator superfamily MFS-1 YP_008392018.1 Bacterial regulatory helix-turn-helix protein, lysR family YP_008392021.1 Asp/Glu/hydantoin racemase YP_008392023.1 Isochorismatase-like YP_008392025.1 Aldehyde oxidase/xanthine dehydrogenase,molybdopterin binding, Pyrrolo-quinoline quinone (PQQ) YP_008392026.1 [2Fe-2S]-binding YP_008392027.1 Monooxygenase, FAD-binding YP_008392030.1 galE: UDP-glucose 4-epimerase YP_008392031.1 Protein of unknown function DUF192, Uncharacterized ACR, COG1430 YP_008392032.1 Metallo-beta-lactamase superfamily, GSH_gloB: hydroxyacylglutathione hydrolase YP_008392036.1 Endoribonuclease L-PSP, Endoribonuclease L-PSP YP_008392037.1 Cysteine, histidine-dependent amidohydrolase/peptidase YP_008392040.1 Aminomethyltransferase folate-binding domain YP_008392045.1 LysR, substrate-binding YP_008392051.1 Exoribonuclease, phosphorolytic domain 1, 3' exoribonuclease family, domain 1 YP_008392055.1 Protein of unknown function DUF140, TIGR00056: conserved hypothetical protein YP_008392056.1 ABC transporter-like, 3a0106s01: sulfate ABC transporter, ATP-binding protein YP_008392058.1 Protein of unknown function DUF330 YP_008392059.1 Glycosyl transferase, group 1 YP_008392062.2 Sel1-like YP_008392063.1 Sel1-like YP_008392064.1 type I secretion membrane fusion protein, HlyD family YP_008392065.1 ABC transporter, transmembrane domain, type I secretion system ATPase YP_008392067.1 Homocysteine S-methyltransferase YP_008392069.1 Colicin V production protein YP_008392070.1 Glutamine amidotransferase, class-II YP_008392071.1 Protein of unknown function DUF330 YP_008392073.1 Paraquat-inducible protein A YP_008392074.1 Glycosyl transferase, family 39 YP_008392075.1 Glycosyl transferase, family 2 YP_008392076.1 F-type H+-transporting ATPase subunit b , ATPase, F0 complex, subunit B/B', bacterial/chloroplast YP_008392077.1 ATPase, F0 complex, subunit B/B',bacterial/chloroplast YP_008392078.1 ATPase, F0/V0 complex, subunit C, ATP synthase subunit C YP_008392082.1 Signal recognition particle, SRP54 subunit, GTPase YP_008392083.1 Radical SAM YP_008392091.1 Ribosomal protein S9 YP_008392092.1 Ribosomal protein L13 YP_008392097.1 Binding-protein-dependent transport systems inner membrane component YP_008392098.1 Binding-protein-dependent transport systems inner membrane component YP_008392102.2 Alcohol dehydrogenase, zinc-binding YP_008392104.1 Peptidase S1/S6, chymotrypsin/Hap YP_008392106.2 Lipase, GDSL YP_008392107.1 Uncharacterised conserved protein UCP028704, OpgC YP_008392112.1 Protein of unknown function (DUF1321) YP_008392113.1 Fe-S hydro-lyase, tartrate dehydratase alpha-type,catalytic domain, Fumarate hydratase (Fumerase) YP_008392115.1 Protein of unknown function DUF2329 YP_008392119.1 AsnC family YP_008392121.1 Protein synthesis factor, GTP-binding, Elongation factor Tu GTP binding domain YP_008392122.1 Protein of unknown function DUF448 YP_008392124.1 Uncharacterised protein family UPF0090,Uncharacterised BCR, YhbC family COG0779 YP_008392126.1 ATPase family associated with various cellular activities (AAA) YP_008392128.1 LysR, substrate-binding YP_008392129.1 Extracellular solute-binding protein, family 3,Bacterial extracellular solute-binding proteins, family 3 YP_008392135.1 Orn/DAP/Arg decarboxylase 2, Pyridoxal-dependent decarboxylase, pyridoxal binding domain YP_008392137.2 Rare lipoprotein A YP_008392139.1 Biotin/lipoyl attachment, Biotin-requiring enzyme YP_008392141.1 General substrate transporter, Sugar (and other) transporter YP_008392145.1 TIGR00145: FTR1 family protein YP_008392146.1 Ferrous iron transport protein, bacterial YP_008392151.1 LysR, substrate-binding YP_008392154.2 similar to bromo adjacent homology domain containing 1 YP_008392155.1 Uncharacterised protein family (UPF0081), TIGR00250: conserved hypothetical protein TIGR00250 YP_008392163.1 Protein of unknown function DUF721 YP_008392165.1 Transglycosylase SLT domain YP_008392168.1 Protein of unknown function DUF2159, secreted YP_008392175.1 electron transfer flavoprotein-ubiquinone oxidoreductase YP_008392179.1 Cyclic nucleotide-binding YP_008392181.1 Cytidine and deoxycytidylate deaminase zinc-binding region YP_008392184.1 Peptidase C26 YP_008392185.1 Pseudouridine synthase, RsuA and RluB/C/D/E/F, S4 domain YP_008392187.1 Primosome PriB/single-strand DNA-binding YP_008392189.1 Prokaryotic dksA/traR C4-type zinc finger, dksA: RNA polymerase-binding protein DksA, DnaK suppressor protein YP_008392190.1 Integrase, catalytic core, phage YP_008392196.1 Aminoacyl-tRNA synthetase, class Ib, tRNA synthetases class I (W and Y) YP_008392198.1 Phosphoglycerate mutase family, alpha-ribazole phosphatase YP_008392200.1 NAD-dependent epimerase/dehydratase YP_008392204.1 Glycosyl transferase, family 2 YP_008392205.1 Cell divisionFtsK/SpoIIIE, FtsK/SpoIIIE family YP_008392206.1 ribosomal large subunit pseudouridine synthase A ,EC:5.4.99.12 EC:4.2.1.70 YP_008392210.1 2Fe-2S iron-sulfur cluster binding domain YP_008392215.1 ribosomal large subunit 23S rRNA methyltransferase SpoU YP_008392217.1 bifunctional protein FolC YP_008392220.1 DNA helicase, UvrD/REP type, ATP-dependent exoDNAse beta subunit YP_008392222.1 Uncharacterised protein family UPF0079, ATPase bacteria, TIGR00150: conserved hypothetical protein TIGR00150 YP_008392223.1 Signal transduction response regulator, receiver domain YP_008392224.1 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I YP_008392227.2 PP-loop family YP_008392229.1 Outer membrane protein, OmpA/MotB YP_008392230.1 Tol-Pal system beta propeller repeat protein TolB YP_008392233.1 MotA/TolQ/ExbB proton channel YP_008392234.1 Thioesterase superfamily YP_008392238.1 Protein of unknown function DUF28, TIGR01033: conserved hypothetical protein TIGR01033 YP_008392239.1 SecA DEAD-like YP_008392240.2 PPIC-type PPIASE domain YP_008392242.1 RDD family YP_008392244.1 Protein of unknown function DUF2257 YP_008392247.1 Chaperone DnaJ, C-terminal YP_008392249.2 Protein of unknown function DUF526 YP_008392250.1 Protein of unknown function DUF1790 YP_008392251.1 NADP oxidoreductase, coenzyme F420-dependent YP_008392253.2 Major facilitator superfamily MFS-1 YP_008392256.1 Glycosyl transferase, group 1 YP_008392258.1 Glycosyl transferase family 2 YP_008392259.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008392261.1 Glutamine amidotransferase class-I YP_008392262.1 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase , TIGR00007: 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase YP_008392267.1 FAD dependent oxidoreductase, Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_008392272.1 Cobyrinic acid a,c-diamide synthase,CobQ/CobB/MinD/ParA nucleotide binding domain YP_008392273.1 rRNA small subunit methyltransferase G, 16S rRNA methyltransferase GidB YP_008392274.2 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA YP_008392279.1 Conserved hypothetical protein CHP00730, TIGR00730: conserved hypothetical protein TIGR00730 YP_008392280.1 Major facilitator superfamily MFS-1 YP_008392281.1 NUDIX hydrolase domain YP_008392282.1 Uncharacterised protein family UPF0093 YP_008392283.1 Haloacid dehalogenase-like hydrolase,beta-phosphoglucomutase family hydrolase YP_008392286.1 Protein of unknown function DUF188, Uncharacterized BCR, YaiI/YqxD family COG1671 YP_008392290.1 tetraacyldisaccharide 4'-kinase, Protein of unknown function DUF343, Trm112p-like protein YP_008392291.1 Peptidase S16, lon N-terminal, ATP-dependent protease La (LON) domain YP_008392297.1 Uncharacterized conserved protein (DUF2075) YP_008392298.1 NIF system FeS cluster assembly, NifU-like scaffold YP_008392299.1 NADH dehydrogenase YP_008392300.1 Peptidase M22, glycoprotease YP_008392307.1 zinc-binding alcohol dehydrogenase, NAD-dependent YP_008392310.1 Alanine dehydrogenase/PNT, C-terminal domain,NAD(P)(+) transhydrogenase (AB-specific), alpha subunit YP_008392312.1 Semialdehyde dehydrogenase, dimerisation domain YP_008392318.1 Protein of unknown function DUF6, transmembrane YP_008392324.1 DSBA-like thioredoxin domain YP_008392327.1 GCN5-related N-acetyltransferase YP_008392328.1 Bacterial regulatory helix-turn-helix protein, lysR family YP_008392332.1 sugar permease YP_008392334.2 DNA polymerase III gamma/tau subunit YP_008392335.1 Uncharacterised protein family UPF0133,Uncharacterised BCR, YbaB family COG0718, TIGR00103: conserved hypothetical protein TIGR00103 YP_008392336.1 Toprim domain YP_008392337.1 3-oxoacyl-(acyl-carrier-protein) reductase,putative YP_008392339.1 Conserved hypothetical protein FYDLN acid YP_008392345.1 TIGR00042: non-canonical purine NTP pyrophosphatase,rdgB/HAM1 family YP_008392346.1 Exoribonuclease, phosphorolytic domain 1 YP_008392347.2 Winged helix-turn-helix transcription repressor,HrcA YP_008392355.1 Cell cycle protein YP_008392356.1 Penicillin-binding protein, transpeptidase YP_008392361.1 Cytochrome oxidase assembly YP_008392362.2 SNARE associated Golgi protein YP_008392363.2 MFS transporter, DHA1 family,bicyclomycin/chloramphenicol resistance protein YP_008392364.1 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase YP_008392368.1 MOFRL family YP_008392370.1 Cytochrome c, class I YP_008392371.1 PQQ-dependent enzyme, N-terminal YP_008392373.1 Bax inhibitor-1-related YP_008392374.1 COX Aromatic Rich Motif YP_008392377.1 Cytochrome C oxidase subunit IV prokaryotic,Prokaryotic Cytochrome C oxidase subunit IV, CyoD: cytochrome o ubiquinol oxidase subunit IV YP_008392378.1 4Fe-4S binding domain YP_008392379.2 DNA/RNA helicase, C-terminal YP_008392381.1 HTH transcriptional regulator, MarR YP_008392383.1 Glycosyl transferase, EC:2.7.8.- YP_008392394.1 Prolyl oligopeptidase family YP_008392401.1 ATP synthase F1, gamma subunit YP_008392402.1 ATPase, F1/V1/A1 complex, alpha/beta subunit,nucleotide-binding domain YP_008392406.1 putative fructokinase YP_008392407.1 Protein of unknown function DUF583 YP_008392409.2 Amino acid permease domain, GABAperm: GABA permease,L-asparagine permease YP_008392411.1 Binding-protein-dependent transport systems inner membrane component YP_008392412.1 Binding-protein-dependent transport systems inner membrane component YP_008392414.1 Phosphate-selective porin O/P YP_008392415.1 Bacterial extracellular solute-binding, family 1 YP_008392416.1 Helix-turn-helix, AraC type YP_008392422.1 AcrB/AcrD/AcrF family YP_008392423.2 Outer membrane efflux protein, efflux transporter,outer membrane factor (OMF) lipoprotein, NodT family YP_008392424.1 Cold-shock protein, DNA-binding YP_008392431.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase, Carbon-nitrogen hydrolase YP_008392432.1 Signal transduction response regulator, receiver domain YP_008392434.1 urea ABC transporter, urea binding protein YP_008392435.1 Bacterial inner-membrane translocator YP_008392436.1 Bacterial inner-membrane translocator YP_008392438.1 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE YP_008392442.1 Alpha/beta hydrolase fold-1 YP_008392443.2 Transcription regulator MerR, DNA binding YP_008392445.1 NAD-dependent epimerase/dehydratase YP_008392447.1 Integrase, catalytic core, phage YP_008392448.1 Nucleotidyltransferase substrate binding protein,HI0074 YP_008392449.1 Nucleotidyltransferase YP_008392457.1 glycoside hydrolase family 28 YP_008392458.1 Integrase, catalytic core, phage YP_008392460.1 Transposase, IS4-like YP_008392463.1 Integrase, catalytic core, phage YP_008392464.1 Protein of unknown function DUF45 YP_008392465.1 Uncharacterised protein family UPF0153 YP_008392467.1 Bacterial extracellular solute-binding, family 1 YP_008392471.1 HTH transcriptional regulator, MarR YP_008392473.1 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family YP_008392475.1 Nucleoside phosphorylase, Phosphorylase superfamily YP_008392477.1 Amine oxidase, Flavin containing amine oxidoreductase, squalene-associated FAD-dependent desaturase YP_008392479.1 squalene synthase HpnC YP_008392480.1 Glycosyl transferase, family 2 YP_008392481.1 NAD-dependent epimerase/dehydratase YP_008392482.1 putative membrane protein YP_008392484.1 Tetratricopeptide TPR-1 YP_008392485.1 Ribosomal protein L36 YP_008392486.1 LysR, substrate-binding, LysR substrate binding domain YP_008392489.2 Lipid/polyisoprenoid-binding, YceI-like, YceI-like domain YP_008392490.1 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_008392491.1 Inorganic pyrophosphatase YP_008392492.1 ABC transporter-like YP_008392494.1 Toluene tolerance, Ttg2 YP_008392495.1 VacJ-like lipoprotein YP_008392496.1 Heat shock protein DnaJ, N-terminal YP_008392499.1 Domain of unknown function DUF1730, TIGR00276: putative iron-sulfur cluster-binding protein YP_008392507.1 Protein of unknown function DUF482 YP_008392509.1 ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1) YP_008392510.1 NADH ubiquinone oxidoreductase subunit NDUFA12 YP_008392513.1 Protein of unknown function DUF2155 YP_008392515.1 Glycosyl transferase, family 20 YP_008392517.2 Glycosyl transferase, family 2, Glycosyl transferase family 2 YP_008392518.1 NUDIX hydrolase domain YP_008392519.1 Aldo/keto reductase, putative voltage-dependent potassium channel beta subunit YP_008392522.2 Restriction endonuclease, type I, R subunit/Type III, Res subunit YP_008392524.1 Peptidase M16 inactive domain YP_008392526.1 Haloacid dehalogenase-like hydrolase YP_008392530.1 Amino acid permease domain, GABAperm: GABA permease YP_008392531.1 DNA-repair protein, UmuC-like, impB/mucB/samB family YP_008392535.1 Haloacid dehalogenase-like hydrolase,HAD-superfamily subfamily IIA hydrolase, TIGR01459 YP_008392536.1 NUDIX hydrolase domain YP_008392537.1 Metallophosphoesterase, TIGR00282: conserved hypothetical protein TIGR00282 YP_008392539.1 Cell division protein ZapA YP_008392542.1 DeoC/LacD family aldolase YP_008392543.1 thiamine phosphate pyrophosphorylase YP_008392545.1 Protein of unknown function DUF2501 YP_008392546.1 FAS1 domain YP_008392548.1 Aminoacyl-tRNA synthetase, class II (D/K/N), genX: lysyl-tRNA synthetase homolog GenX YP_008392549.1 Radical SAM, Radical SAM superfamily, TIGR00238: KamA family protein YP_008392551.1 Peptidase M24, structural domain YP_008392556.1 Polyphosphate kinase 2 YP_008392557.1 Protein of unknown function DUF179, Uncharacterized ACR, COG1678 YP_008392558.1 ATPase, P-loop-containing, P-loop ATPase protein family YP_008392560.1 ATPase-like, ATP-binding domain YP_008392562.1 GrpE nucleotide exchange factor YP_008392563.1 Heat shock protein 70, chaperone protein DnaK YP_008392564.1 Chaperone DnaJ, C-terminal YP_008392570.1 Protein of unknown function DUF1328 YP_008392571.1 Protein of unknown function DUF6, transmembrane YP_008392572.1 glycyl-tRNA synthetase beta chain (glycine--tRNA LigAs beta chain) (GlyRS), Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal YP_008392574.1 Protein of unknown function DUF2076 YP_008392576.1 Transposase, IS4-like YP_008392577.1 Helix-turn-helix type 3 YP_008392578.1 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_008392585.1 Pyridoxal phosphate-dependent enzyme, beta subunit YP_008392587.1 HI0933-like protein, TIGR00275: conserved hypothetical protein TIGR00275 YP_008392591.1 Signal transduction response regulator, receiver domain, phosphate regulon transcriptional regulatory protein PhoB YP_008392598.2 Protein of unknown function DUF21 YP_008392599.1 Alcohol dehydrogenase, zinc-binding, Zinc-binding dehydrogenase YP_008392600.1 ABC-type bacteriocin transporter YP_008392604.1 Short-chain dehydrogenase/reductase SDR YP_008392607.1 Protein of unknown function DUF2501 YP_008392619.1 Putative papain-like cysteine peptidase (DUF1796) YP_008392622.1 Acyltransferase 3 YP_008392625.1 DNA/RNA non-specific endonuclease YP_008392629.1 MmgE/PrpD family YP_008392632.1 AMP-dependent synthetase/ligase YP_008392633.1 Major facilitator superfamily MFS-1, MFS transporter, sialate:H+ symporter (SHS) family YP_008392635.1 Protein of unknown function DUF1643 YP_008392636.1 Peptidase M29, aminopeptidase II, Thermophilic metalloprotease (M29) YP_008392638.1 Protein of unknown function DUF1849 YP_008392640.1 Beta-eliminating lyase YP_008392644.1 TIGR00092: GTP-binding protein YchF YP_008392647.1 SPOUT methyltransferase, predicted, Predicted SPOUT methyltransferase, TIGR00246: conserved hypothetical protein TIGR00246 YP_008392654.1 Cysteine-rich domain YP_008392655.1 Lactate utilization protein B/C, Uncharacterised ACR, YkgG family COG1556, TIGR00273: iron-sulfur cluster-binding protein YP_008392656.1 Lactate utilization protein B/C YP_008392665.1 Toluene tolerance YP_008392666.1 Transketolase-like, pyrimidine-binding domain YP_008392668.2 Protein of unknown function DUF21 YP_008392670.1 Uracil-DNA glycosylase-like YP_008392671.1 Tetratricopeptide TPR-1 YP_008392674.1 Short-chain dehydrogenase/reductase SDR YP_008392675.1 SNARE associated Golgi protein YP_008392686.1 Uncharacterised conserved protein UCP014873,membrane associated, Protein of unknown function (DUF1269) YP_008392689.1 Short-chain dehydrogenase/reductase SDR YP_008392691.1 LysR, substrate-binding YP_008392692.1 Cation/H+ exchanger YP_008392694.1 TonB-dependent receptor YP_008392695.1 Periplasmic binding protein YP_008392696.1 ABC transporter permease protein, FecCD transport family YP_008392698.1 Glycosyl hydrolase family 20, catalytic domain YP_008392700.2 Sodium/solute symporter YP_008392703.1 two component response regulator LuxR YP_008392705.1 DNA photolyase, FAD-binding/Cryptochrome,C-terminal YP_008392709.1 Uncharacterised protein family UPF0118, Domain of unknown function DUF20 YP_008392710.1 Aminotransferase, class I/II YP_008392713.1 NAD-dependent glycerol-3-phosphate dehydrogenase,N-terminal YP_008392714.1 BFD-like [2Fe-2S]-binding domain YP_008392716.1 Transmembrane pair, bacterial, Bacterial Transmembrane Pair family YP_008392720.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_008392727.1 LysR, substrate-binding YP_008392729.1 Cytochrome c, class I, identical to Gluconate 2-dehydrogenase cytochrome c subunit [Acetobacter pomorum DM001] (1.1.99.3) YP_008392730.1 isoquinoline 1-oxidoreductase, beta subunit,Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding YP_008392731.1 [2Fe-2S] binding domain, 4-hydroxybenzoyl-CoA reductase, gamma subunit YP_008392746.2 Protein of unknown function DUF1275 YP_008392749.1 Protein of unknown function DUF805 YP_008392752.1 CHRD domain YP_008392756.1 Putative helicase A859L YP_008392758.2 Invasion associated locus B YP_008392763.1 FAD dependent oxidoreductase YP_008392766.1 Protein of unknown function DUF1311 YP_008392773.1 Helix-turn-helix type 3 YP_008392778.2 Resolvase, N-terminal YP_008392780.2 Radical SAM YP_008392785.1 Terminase-like family YP_008392786.1 Rhodanese-like YP_008392788.1 Uncharacterized protein conserved in bacteria (DUF2212) YP_008392789.1 Protein of unknown function DUF2213 YP_008392812.1 Cation/H+ exchanger, Sodium/hydrogen exchanger family YP_008392813.1 TonB-dependent receptor, beta-barrel, TonB-dependent Receptor Plug Domain YP_008392814.1 Aminoglycoside phosphotransferase YP_008392815.1 Aminoglycoside phosphotransferase, possibly pseudogene YP_008392821.1 Protein of unknown function DUF488 YP_008392824.2 Short-chain dehydrogenase/reductase SDR YP_008392825.1 Camphor resistance CrcB protein YP_008392826.1 Glyoxalase/bleomycin resistance protein/dioxygenase YP_008392828.1 acyl-CoA thioester hydrolase cytosolic long-chain,Thioesterase superfamily YP_008392833.1 metallopeptidase, Peptidase family M13 YP_008392834.1 TonB-dependent receptor, beta-barrel YP_008392835.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008392836.1 Coenzyme A transferase YP_008392837.1 MOFRL family YP_008392838.1 Acyl-CoA oxidase/dehydrogenase, type 1 YP_008392839.1 Short-chain dehydrogenase/reductase SDR, short chain dehydrogenase YP_008392840.1 Protein of unknown function DUF993 YP_008392841.1 Xylose isomerase, TIM barrel domain YP_008392842.1 Electron transfer flavoprotein, alpha/beta-subunit YP_008392843.1 Electron transfer flavoprotein, alpha/beta-subunit YP_008392844.1 betaine aldehyde dehydrogenase YP_008392845.1 putative choline dehydrogenase BetA YP_008392846.1 Major facilitator superfamily MFS-1 YP_008392850.1 Polyphosphate kinase 2 YP_008392853.2 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit YP_008392854.1 Transketolase, pyrimidine binding domain YP_008392855.1 esterase/lipase, alpha/beta hydrolase fold YP_008392858.1 NADH dehydrogenase, pyridine nucleotide-disulfide oxidoreductase family protein YP_008392860.1 Cobalamin (vitamin B12) biosynthesis CobW-like,CobW/HypB/UreG, nucleotide-binding domain YP_008392861.1 Voltage gated chloride channel YP_008392862.1 Cation efflux protein, Cation efflux family, cation diffusion facilitator family transporter YP_008392863.2 Cation efflux protein YP_008392864.1 FAD dependent oxidoreductase YP_008392874.1 UBA/THIF-type NAD/FAD binding fold YP_008392875.1 aspartyl-tRNA synthetase YP_008392878.1 SMP-30/Gluconolaconase/LRE-like region YP_008392879.1 Major facilitator superfamily MFS-1 YP_008392881.1 Protein synthesis factor, GTP-binding YP_008392887.1 FAD dependent oxidoreductase YP_008392892.1 Aminotransferase, class I/II, Aminotransferase class I and II YP_008392894.1 Glutamine synthetase, catalytic domain YP_008392897.1 CDS YP_008392898.1 Pyrrolo-quinoline quinone repeat, quinoprotein glucose dehydrogenase subunit 1 YP_008392903.1 Methionine biosynthesis MetW YP_008392905.1 Endonuclease/exonuclease/phosphatase YP_008392907.1 Protein of unknown function DUF88 YP_008392925.1 possibly pseudogene YP_008392926.2 truncated due to mutation, possibly pseudogene YP_008392927.1 Protein of unknown function DUF1009 YP_008392933.1 engB, yihA, ysxC YP_008392942.1 Protein of unknown function DUF1150 YP_008392947.1 sulfate ABC transporter, ATP-binding protein YP_008392948.1 Organic solvent tolerance-like, N-terminal YP_008392949.1 Lipopolysccharide-assembly, LptC-related YP_008392954.1 short-chain dehydrogenase/reductase SDR YP_008392960.2 NERD, Nuclease-related domain YP_008392964.1 Protein of unknown function DUF140 YP_008392971.1 GABAperm: GABA permease YP_008392972.2 Protein of unknown function DUF1275 YP_008392977.1 AMP-dependent synthetase/ligase YP_008392978.2 Protein of unknown function DUF1653 YP_008392985.2 FAD linked oxidase domain-containing protein YP_008392987.1 Sua5/YciO/YrdC/YwlC family protein, translation modulator SUA5/YciO/YrdC/YwlC YP_008392988.1 Cytosol aminopeptidase family, catalytic domain YP_008392992.1 Peptidase S1/S6, chymotrypsin/Hap, protease Do YP_008393000.1 Cysteine, histidine-dependent amidohydrolase/peptidase YP_008393001.1 twin arginine-targeting protein translocase, TatA/E family YP_008393002.1 Class II aldolase/adducin, N-terminal YP_008393004.1 Haloacid dehalogenase-like hydrolase YP_008393006.1 Aminoacyl-tRNA synthetase, class Ia YP_008393007.1 Peptidase A8, signal peptidase II YP_008393011.1 Protein of unknown function DUF6, transmembrane YP_008393018.1 Surface antigen msp4, OmpA family YP_008393019.1 Protein of unknown function DUF1491 YP_008393023.1 DNA recombination-mediator protein A YP_008393024.1 glycerol-3-phosphate acyltransferase PlsY , Protein of unknown function DUF205 YP_008393028.1 Carboxymuconolactone decarboxylase YP_008393029.1 ATPase, AFG1-like, AFG1-like ATPase YP_008393032.1 2-oxoglutarate dehydrogenase E3 component,FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_008393047.1 NADH:ubiquinone oxidoreductase-like, 20kDa subunit YP_008393051.1 GtrA-like protein YP_008393052.1 Outer membrane protein, OmpA/MotB, OmpA family YP_008393054.2 Integrase, catalytic core, phage, Phage integrase family, tyrosine recombinase XerD YP_008393059.1 Multiple antibiotic resistance (MarC)-related, MarC family integral membrane protein YP_008393060.1 Protein of unknown function DUF519 YP_008393061.1 metalloendopeptidase, putative, glycoprotease family YP_008393062.1 Porphobilinogen deaminase, N-terminal YP_008393066.1 Mitochondrial inner membrane translocase complex,subunit Tim44-related YP_008393081.1 Transcription regulator, TetR-like, DNA-binding,bacterial/archaeal YP_008393087.1 Integrase, catalytic core, phage, Phage integrase family YP_008393088.1 Protein of unknown function DUF2136 YP_008393089.1 Helix-turn-helix type 3 YP_008393090.1 HicB family YP_008393092.1 Endodeoxyribonuclease, RusA-like,Endodeoxyribonuclease RusA YP_008393094.1 HicB family YP_008393096.1 putative mobilization protein YP_008393102.1 Protein of unknown function DUF1275 YP_008393116.1 Protein of unknown function DUF927 YP_008393119.1 NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_008393122.1 peptidase S1/S6 YP_008393125.1 Orn/DAP/Arg decarboxylase 2 YP_008393132.1 Dephospho-CoA kinase YP_008393135.1 Glycosyl transferase, group 1 YP_008393136.1 Heparinase II/III-like YP_008393140.1 AIR synthase related protein YP_008393143.1 Ppx/GppA phosphatase YP_008393145.1 Protein of unknown function DUF140 YP_008393146.1 aatB; putative aspartate aminotransferase B YP_008393149.1 Coagulation factor 5/8 type, C-terminal YP_008393153.1 Protein of unknown function DUF937 YP_008393157.1 thiol:disulfide interchange protein DsbE YP_008393158.1 Cytochrome c assembly protein YP_008393159.1 CcmE/CycJ protein YP_008393161.1 Cytochrome c assembly protein YP_008393162.1 YCII-related YP_008393163.1 Uncharacterised protein family UPF0310, Protein of unknown function DUF55 YP_008393164.1 Beta-lactamase hydrolase-like, Putative phosphatase (DUF442), conserved hypothetical protein TIGR01244 YP_008393168.1 2-ketogluconate reductase like YP_008393178.1 General substrate transporter, Sugar (and other) transporter, MFS transporter, metabolite:H+ symporter (MHS) family protein YP_008393180.1 RmuC YP_008393181.1 Signal transduction response regulator, receiver domain YP_008393182.1 ATPase-like, ATP-binding domain YP_008393183.1 Acriflavin resistance protein, AcrB/AcrD/AcrF family, heavy metal efflux pump, CzcA family YP_008393184.1 efflux transporter, RND family, MFP subunit YP_008393186.1 Ribosomal protein L11, C-terminal domain, Ribosomal protein L11, N-terminal domain, L11_bact: ribosomal protein L11 YP_008393187.1 Ribosomal protein L1 YP_008393194.1 Ribosomal protein S12/S23 YP_008393200.1 Ribosomal protein L25/L23 YP_008393208.1 Ribosomal protein L14b/L23e YP_008393211.1 Ribosomal protein S14p/S29e YP_008393213.1 Ribosomal protein L6, alpha-beta domain, Ribosomal protein L6, L6_bact: ribosomal protein L6 YP_008393214.1 Ribosomal protein L18/L5 YP_008393217.1 Ribosomal protein L15 amino terminal region YP_008393218.1 preprotein translocase, SecY subunit YP_008393220.1 Ribosomal protein S13/S18 YP_008393224.2 ABC transporter, substrate-binding protein,aliphatic sulfonates family YP_008393225.2 Binding-protein-dependent transport systems inner membrane component YP_008393226.2 ABC transporter YP_008393228.1 Protein of unknown function DUF1328 YP_008393230.1 Acriflavin resistance protein YP_008393231.1 Acriflavin resistance protein YP_008393233.1 Multidrug resistance protein YP_008393234.1 CsbD-like YP_008393236.1 DNA methylase N-4/N-6 YP_008393238.1 Protein of unknown function DUF1355 YP_008393239.1 N-terminal double-transmembrane domain YP_008393240.1 Protein of unknown function DUF58 YP_008393242.1 Protein of unknown function DUF1285 YP_008393244.1 ABC transporter, transmembrane domain YP_008393245.2 Secretion protein HlyD YP_008393246.1 Major facilitator superfamily MFS-1 YP_008393247.1 NUDIX domain YP_008393248.1 Protein of unknown function DUF610 YP_008393250.1 Peptidase M23 YP_008393251.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_008393254.1 Transcription elongation factor, GreA/GreB domain,prokaryotic YP_008393256.1 carbamoyl phosphate synthase small subunit YP_008393262.1 Ribosomal protein S6 YP_008393269.1 Predicted permease YjgP/YjgQ family YP_008393270.1 Predicted permease YjgP/YjgQ family YP_008393276.1 Cobyrinic acid a,c-diamide synthase YP_008393279.2 HI0933-like protein YP_008393280.1 Tetrapyrrole methylase YP_008393282.1 Tetratricopeptide TPR-1 YP_008393283.1 Transcription factor CarD YP_008393284.1 Uncharacterised protein family (UPF0187) YP_008393286.1 Protein of unknown function DUF218 YP_008393292.1 ATPase-like, ATP-binding domain, Histidine kinase-,DNA gyrase B-, and HSP90-like ATPase YP_008393293.1 Proteasome, subunit alpha/beta YP_008393294.1 ATPase, AAA-2, heat shock protein HslVU, ATPase subunit HslU YP_008393297.1 isoquinoline 1-oxidoreductase, alpha subunit,[2Fe-2S] binding domain YP_008393298.1 Cytochrome c, class I YP_008393300.1 Ribosomal protein L35, rpmI_bact: ribosomal protein L35 YP_008393305.1 Bacterial extracellular solute-binding protein,family 5 YP_008393307.1 Cation/H+ exchanger, Sodium/hydrogen exchanger family YP_008393312.1 Isocitrate/isopropylmalate dehydrogenase YP_008393315.1 DNA helicase, UvrD/REP type YP_008393318.1 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] YP_008393320.1 Protein of unknown function DUF465 YP_008393322.2 Protein of unknown function DUF1013 YP_008393323.2 Heat shock protein Hsp20, Hsp20/alpha crystallin family YP_008393328.1 SecD/SecF/SecDF export membrane protein, protein translocase membrane subunit SecF YP_008393329.1 SecD/SecF/SecDF export membrane protein YP_008393330.1 Oxidoreductase family, NAD-binding Rossmann fold YP_008393343.1 acetic acid bacteria resistance protein YP_008393348.1 Uncharacterised protein family UPF0054 YP_008393350.1 Uncharacterized protein family UPF0004 YP_008393353.1 Bacterial surface antigen (D15), Surface antigen YP_008393354.1 Protein of unknown function DUF490 YP_008393368.2 MoeA, N-terminal and linker domain YP_008393373.1 FAD dependent oxidoreductase YP_008393378.1 Protein of unknown function DUF339 YP_008393386.1 Heat shock protein DnaJ, N-terminal YP_008393394.1 Methyltransferase type 11 YP_008393397.1 Protein of unknown function DUF1178 YP_008393398.1 Protein of unknown function DUF2147 YP_008393399.1 Domain of unknown function (DUF2394) YP_008393402.1 Helix-turn-helix type 3 YP_008393411.1 Amino acid permease domain YP_008393413.1 SNARE associated Golgi protein YP_008393420.1 deoxyribonuclease TatD YP_008393422.1 Universal stress protein family YP_008393424.1 Short-chain dehydrogenase/reductase SDR YP_008393428.1 6-pyruvoyl tetrahydrobiopterin synthase YP_008393431.1 biotin synthase, Radical SAM, Biotin and Thiamin Synthesis associated domain YP_008393432.1 Domain of unknown function (DUF333) YP_008393437.1 Nitrite/sulphite reductase 4Fe-4S domain YP_008393438.1 Uncharacterised conserved protein UCP030820,Bacterial protein of unknown function (DUF934) YP_008393446.1 Phosphopantetheine-binding YP_008393450.1 Protein of unknown function DUF218 YP_008393451.1 Methyltransferase type 12 YP_008393452.1 ABC-type glycine betaine transport system,substrate-binding domain YP_008393455.1 Protein of unknown function DUF2219 YP_008393457.1 SsrA-binding protein YP_008393460.1 Acylneuraminate cytidylyltransferase YP_008393466.2 Rhodanese-like domain YP_008393467.1 Uncharacterised protein family UPF0118, Domain of unknown function DUF20 YP_008393469.1 Phospholipase D/Transphosphatidylase YP_008393470.1 Uncharacterised protein family UPF0102 YP_008393473.1 BolA-like protein YP_008393478.1 SAICAR synthetase YP_008393482.1 competence/damage-inducible protein CinA C-terminal domain YP_008393486.1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_008393487.1 dihydrolipoamide acetyltransferase component YP_008393493.1 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_008393494.1 Chorismate binding, C-terminal YP_008393504.1 MobA/MobL protein YP_008393511.1 DNA methylase N-4/N-6 YP_008393514.1 Addiction module toxin, Txe/YoeB, Plasmid encoded toxin Txe YP_008393519.1 Resolvase, N-terminal YP_008393520.1 Transposase, Tn3 YP_008393521.1 putative DNA invertase