-- dump date   	20240513_231259
-- class       	Genbank::Feature
-- table       	feature
-- table       	main
-- field 1	id
-- field 2	type
-- field 3	name
-- field 4	contig
-- field 5	start_pos
-- field 6	end_pos
-- field 7	strand
-- field 8	description
-- field 9	chrom_position
-- field 10	organism
-- field 11	GeneID
-- header
-- id	type	name	contig	start_pos	end_pos	strand	description	chrom_position	organism	GeneID
869250000001	SEQ_END	SEQ_END	NC_025260.1	2746313	2746313	DR	NC_025260.1; contig end	2746313..2746313	Theileria orientalis strain Shintoku	<NA>
869250000002	SEQ_END	SEQ_END	NC_025261.1	2216979	2216979	DR	NC_025261.1; contig end	2216979..2216979	Theileria orientalis strain Shintoku	<NA>
869250000003	SEQ_END	SEQ_END	NC_025262.1	2000793	2000793	DR	NC_025262.1; contig end	2000793..2000793	Theileria orientalis strain Shintoku	<NA>
869250000004	SEQ_END	SEQ_END	NC_025263.1	2019511	2019511	DR	NC_025263.1; contig end	2019511..2019511	Theileria orientalis strain Shintoku	<NA>
869250000005	SEQ_END	SEQ_END	NW_009646192.1	2595	2595	DR	NW_009646192.1; contig end	2595..2595	Theileria orientalis strain Shintoku	<NA>
869250000006	SEQ_END	SEQ_END	NW_009646193.1	24173	24173	DR	NW_009646193.1; contig end	24173..24173	Theileria orientalis strain Shintoku	<NA>
TOT_010000001	CDS	TOT_010000001	NC_025260.1	198	368	R	hypothetical protein	complement(198..368)	Theileria orientalis strain Shintoku	20712976
TOT_010000002	CDS	TOT_010000002	NC_025260.1	505	1463	R	conserved hypothetical protein	complement(join(505..678,1023..1463))	Theileria orientalis strain Shintoku	20712977
TOT_010000003	CDS	TOT_010000003	NC_025260.1	1805	10431	R	conserved hypothetical protein	complement(join(1805..4350,4491..10431))	Theileria orientalis strain Shintoku	20712978
TOT_010000004	CDS	TOT_010000004	NC_025260.1	13629	18194	R	ABC transporter related domain containing protein; uncharacterized protein	complement(13629..18194)	Theileria orientalis strain Shintoku	20712979
TOT_010000005	CDS	TOT_010000005	NC_025260.1	19482	21044	D	conserved hypothetical protein	19482..21044	Theileria orientalis strain Shintoku	20712980
TOT_010000006	CDS	TOT_010000006	NC_025260.1	21857	26371	R	ABC transporter related domain containing protein; uncharacterized protein	complement(21857..26371)	Theileria orientalis strain Shintoku	20712981
TOT_010000007	CDS	TOT_010000007	NC_025260.1	26724	28563	R	hypothetical protein	complement(join(26724..26832,26925..27046,27279..27415,27712..27809,28466..28563))	Theileria orientalis strain Shintoku	20712982
TOT_010000008	CDS	TOT_010000008	NC_025260.1	29844	34412	D	ABC transporter	29844..34412	Theileria orientalis strain Shintoku	20712983
TOT_010000009	CDS	TOT_010000009	NC_025260.1	34817	40431	D	conserved hypothetical protein	join(34817..36108,36212..38472,38570..40431)	Theileria orientalis strain Shintoku	20712984
TOT_010001198	CDS	TOT_010001198	NC_025260.1	41144	41802	R	protein kinase C inhibitor	complement(join(41144..41281,41312..41499,41532..41614,41669..41802))	Theileria orientalis strain Shintoku	20713997
TOT_010000011	CDS	TOT_010000011	NC_025260.1	41990	43062	R	exosome complex exonuclease	complement(join(41990..42094,42124..42219,42250..42352,42383..42450,42482..42586,42616..42864,42898..43062))	Theileria orientalis strain Shintoku	20712985
TOT_010000012	CDS	TOT_010000012	NC_025260.1	43288	47715	R	aldo/keto reductase family protein; uncharacterized protein	complement(join(43288..45590,45629..45784,45816..46703,46758..47715))	Theileria orientalis strain Shintoku	20712986
TOT_010000013	CDS	TOT_010000013	NC_025260.1	48361	50837	D	SJCHGC07392 protein; uncharacterized protein	join(48361..48851,48882..49022,49056..49748,49778..49883,49913..50187,50224..50378,50445..50592,50648..50837)	Theileria orientalis strain Shintoku	20712987
TOT_010000014	CDS	TOT_010000014	NC_025260.1	51162	53982	R	sortilin	complement(join(51162..51457,51744..53982))	Theileria orientalis strain Shintoku	20712988
TOT_010000015	CDS	TOT_010000015	NC_025260.1	54970	57886	D	PA14 domain containing protein; uncharacterized protein	join(54970..55122,55152..55278,55314..55419,55488..55806,55852..56417,56473..56665,56696..56767,56800..56998,57032..57810,57842..57886)	Theileria orientalis strain Shintoku	20712989
TOT_010000016	CDS	TOT_010000016	NC_025260.1	58100	58548	D	mRNA splicing factor, Cwf18 family protein; uncharacterized protein	join(58100..58279,58342..58548)	Theileria orientalis strain Shintoku	20712990
TOT_010000017	CDS	TOT_010000017	NC_025260.1	58806	59888	D	conserved hypothetical protein	58806..59888	Theileria orientalis strain Shintoku	20712991
TOT_010000018	CDS	TOT_010000018	NC_025260.1	60077	61520	D	conserved hypothetical protein	join(60077..60529,60570..61520)	Theileria orientalis strain Shintoku	20712992
TOT_010000019	CDS	TOT_010000019	NC_025260.1	62015	73155	R	cysteine desulfurase	complement(join(62015..62201,62438..67231,67524..67893,68160..68269,68324..70242,70789..71191,71344..71422,71463..71647,71740..71968,72045..73155))	Theileria orientalis strain Shintoku	20712993
TOT_010000020	CDS	TOT_010000020	NC_025260.1	74224	75598	R	CS domain containing protein; uncharacterized protein	complement(join(74224..74361,74394..74882,74914..74989,75163..75404,75434..75598))	Theileria orientalis strain Shintoku	20712994
TOT_010000021	CDS	TOT_010000021	NC_025260.1	75914	78226	D	conserved hypothetical protein	join(75914..77360,77403..77638,77714..78226)	Theileria orientalis strain Shintoku	20712995
TOT_010001199	CDS	TOT_010001199	NC_025260.1	78231	78737	R	conserved hypothetical protein	complement(78231..78737)	Theileria orientalis strain Shintoku	20713998
TOT_010000023	CDS	TOT_010000023	NC_025260.1	79191	80500	D	dihydrouridine synthase, DuS family protein; uncharacterized protein	join(79191..79270,79304..79407,79439..79618,79648..80162,80194..80311,80364..80500)	Theileria orientalis strain Shintoku	20712996
TOT_010000024	CDS	TOT_010000024	NC_025260.1	80640	81704	D	DNA-directed RNA polymerase II	80640..81704	Theileria orientalis strain Shintoku	20712997
TOT_010000025	CDS	TOT_010000025	NC_025260.1	81784	82995	D	alkylated DNA repair protein	join(81784..82081,82116..82195,82228..82449,82481..82617,82649..82725,82757..82995)	Theileria orientalis strain Shintoku	20712998
TOT_010001200	CDS	TOT_010001200	NC_025260.1	83260	85364	D	aspartyl/glutamyl-tRNA amido transferase	join(83260..85172,85256..85364)	Theileria orientalis strain Shintoku	20713999
TOT_010001201	CDS	TOT_010001201	NC_025260.1	85353	87110	R	conserved hypothetical protein	complement(join(85353..85547,85614..86164,86210..87110))	Theileria orientalis strain Shintoku	20714000
TOT_010001202	CDS	TOT_010001202	NC_025260.1	87625	90311	R	conserved hypothetical protein	complement(join(87625..87906,87949..89985,90021..90311))	Theileria orientalis strain Shintoku	20714001
TOT_010000029	CDS	TOT_010000029	NC_025260.1	90453	91861	R	molecular chaperone DnaJ	complement(join(90453..90732,90775..90941,91148..91861))	Theileria orientalis strain Shintoku	20712999
TOT_010000030	CDS	TOT_010000030	NC_025260.1	92289	94307	D	conserved hypothetical protein	join(92289..92351,92551..93098,93128..93288,93319..93422,93442..93569,93600..93720,93763..93882,93917..94029,94130..94307)	Theileria orientalis strain Shintoku	20713000
TOT_010001203	CDS	TOT_010001203	NC_025260.1	95014	96648	R	polyadenylate polymerase	complement(join(95014..95280,95313..95426,95459..95695,95731..96648))	Theileria orientalis strain Shintoku	20714002
TOT_010000032	CDS	TOT_010000032	NC_025260.1	97214	98557	D	conserved hypothetical protein	97214..98557	Theileria orientalis strain Shintoku	20713001
TOT_010000033	CDS	TOT_010000033	NC_025260.1	98700	99674	R	U3 small nucleolar ribonucleoprotein	complement(join(98700..99032,99064..99179,99211..99405,99440..99674))	Theileria orientalis strain Shintoku	20713002
TOT_010000034	CDS	TOT_010000034	NC_025260.1	99936	101096	R	conserved hypothetical protein	complement(join(99936..100055,100095..100415,100449..101096))	Theileria orientalis strain Shintoku	20713003
TOT_010000035	CDS	TOT_010000035	NC_025260.1	101456	102847	D	ribonuclease	join(101456..101531,101564..101677,101710..101836,101877..101964,102009..102086,102247..102382,102612..102847)	Theileria orientalis strain Shintoku	20713004
TOT_010000036	CDS	TOT_010000036	NC_025260.1	102861	104494	R	conserved hypothetical protein	complement(join(102861..103963,103995..104327,104368..104494))	Theileria orientalis strain Shintoku	20713005
TOT_010000037	CDS	TOT_010000037	NC_025260.1	105072	106535	D	hexokinase 1	105072..106535	Theileria orientalis strain Shintoku	20713006
TOT_010000038	CDS	TOT_010000038	NC_025260.1	106589	107456	D	conserved hypothetical protein	join(106589..106850,106886..107141,107180..107456)	Theileria orientalis strain Shintoku	20713007
TOT_010000039	CDS	TOT_010000039	NC_025260.1	108065	109525	D	glucokinase	108065..109525	Theileria orientalis strain Shintoku	20713008
TOT_010000040	CDS	TOT_010000040	NC_025260.1	109579	110446	D	conserved hypothetical protein	join(109579..109840,109876..110131,110170..110446)	Theileria orientalis strain Shintoku	20713009
TOT_010000041	CDS	TOT_010000041	NC_025260.1	111079	112548	D	hexokinase 1	111079..112548	Theileria orientalis strain Shintoku	20713010
TOT_010000042	CDS	TOT_010000042	NC_025260.1	112610	113009	R	SWAP/Surp domain containing protein; uncharacterized protein	complement(join(112610..112873,112902..113009))	Theileria orientalis strain Shintoku	20713011
TOT_010000043	CDS	TOT_010000043	NC_025260.1	113547	114147	D	conserved hypothetical protein	join(113547..113611,113668..113992,114025..114147)	Theileria orientalis strain Shintoku	20713012
TOT_010000044	CDS	TOT_010000044	NC_025260.1	115082	116213	R	conserved hypothetical protein	complement(join(115082..115216,115246..115337,115543..115866,115898..116093,116130..116213))	Theileria orientalis strain Shintoku	20713013
TOT_010000045	CDS	TOT_010000045	NC_025260.1	116854	118506	D	galactose oxidase/kelch, beta-propeller domain containing protein; uncharacterized protein	join(116854..116875,116920..117099,117132..117256,117290..117395,117428..117480,117512..117554,117589..117607,117639..117709,117781..117862,117900..118003,118036..118246,118278..118506)	Theileria orientalis strain Shintoku	20713014
TOT_010000046	CDS	TOT_010000046	NC_025260.1	118761	120870	R	conserved hypothetical protein	complement(join(118761..120689,120853..120870))	Theileria orientalis strain Shintoku	20713015
TOT_010000047	CDS	TOT_010000047	NC_025260.1	121026	122354	D	conserved hypothetical protein	join(121026..121082,121114..121378,121411..121772,121803..121892,121932..122162,122193..122354)	Theileria orientalis strain Shintoku	20713016
TOT_010000048	CDS	TOT_010000048	NC_025260.1	122591	124324	D	zinc finger, C2H2-type domain containing protein; uncharacterized protein	122591..124324	Theileria orientalis strain Shintoku	20713017
TOT_010001204	CDS	TOT_010001204	NC_025260.1	124567	125028	R	optic atrophy 3-like family protein; uncharacterized protein	complement(124567..125028)	Theileria orientalis strain Shintoku	20714003
TOT_010000049	CDS	TOT_010000049	NC_025260.1	125166	127253	R	GTPase	complement(join(125166..125232,125264..125395,125426..125530,125561..125899,125939..126190,126222..126277,126308..126646,126680..126745,126779..126855,126893..127001,127038..127253))	Theileria orientalis strain Shintoku	20713018
TOT_010000050	CDS	TOT_010000050	NC_025260.1	127410	129156	R	DEAD-box family RNA helicase	complement(join(127410..127529,127561..127798,127829..128010,128052..128240,128271..128356,128388..128502,128534..128633,128665..128826,128865..128922,128967..129156))	Theileria orientalis strain Shintoku	20713019
TOT_010000051	CDS	TOT_010000051	NC_025260.1	130023	130538	D	conserved hypothetical protein	130023..130538	Theileria orientalis strain Shintoku	20713020
TOT_010000052	CDS	TOT_010000052	NC_025260.1	130670	131495	R	protein of unknown function DUF846, eukaryotic family protein; uncharacterized protein	complement(join(130670..130734,130767..130851,130901..131017,131072..131147,131180..131305,131344..131495))	Theileria orientalis strain Shintoku	20713021
TOT_010000053	CDS	TOT_010000053	NC_025260.1	131660	132551	D	conserved hypothetical protein	join(131660..132264,132300..132420,132450..132551)	Theileria orientalis strain Shintoku	20713022
TOT_010000054	CDS	TOT_010000054	NC_025260.1	133040	136656	R	tetratricopeptide-like helical domain containing protein; uncharacterized protein	complement(join(133040..134197,134497..136172,136200..136337,136389..136656))	Theileria orientalis strain Shintoku	20713023
TOT_010000055	CDS	TOT_010000055	NC_025260.1	136856	138501	D	conserved hypothetical protein	join(136856..137058,137091..137192,137224..137311,137345..137446,137477..137679,137709..137946,138043..138501)	Theileria orientalis strain Shintoku	20713024
TOT_010000056	CDS	TOT_010000056	NC_025260.1	138525	139012	R	NifU-like protein 2, chloroplast precursor	complement(join(138525..138659,138692..139012))	Theileria orientalis strain Shintoku	20713025
TOT_010000057	CDS	TOT_010000057	NC_025260.1	139223	140091	D	conserved hypothetical protein	join(139223..139424,139462..139615,139645..139912,139945..140091)	Theileria orientalis strain Shintoku	20713026
TOT_010000058	CDS	TOT_010000058	NC_025260.1	140137	140679	D	conserved hypothetical protein	join(140137..140250,140281..140679)	Theileria orientalis strain Shintoku	20713027
TOT_010000059	CDS	TOT_010000059	NC_025260.1	140911	142060	D	protein phosphatase 2c	join(140911..141013,141044..141170,141210..141535,141565..141697,141733..141886,141917..142060)	Theileria orientalis strain Shintoku	20713028
TOT_010001205	CDS	TOT_010001205	NC_025260.1	142351	142530	R	conserved hypothetical protein	complement(142351..142530)	Theileria orientalis strain Shintoku	20714004
TOT_010000061	CDS	TOT_010000061	NC_025260.1	144731	145082	D	50S ribosomal protein L33	join(144731..144842,144886..145082)	Theileria orientalis strain Shintoku	20713029
TOT_010000062	CDS	TOT_010000062	NC_025260.1	145397	145678	D	acyl-CoA-binding protein	145397..145678	Theileria orientalis strain Shintoku	20713030
TOT_010000063	CDS	TOT_010000063	NC_025260.1	147013	149361	D	conserved hypothetical protein	join(147013..148909,149057..149361)	Theileria orientalis strain Shintoku	20713031
TOT_010000064	CDS	TOT_010000064	NC_025260.1	149362	150269	D	hypothetical protein	join(149362..149389,149497..149603,149845..150026,150116..150269)	Theileria orientalis strain Shintoku	20713032
TOT_010000065	CDS	TOT_010000065	NC_025260.1	151238	153764	D	transcription factor jumonji domain containing protein; uncharacterized protein	join(151238..151411,151455..151569,151606..151730,151775..151925,151957..152142,152174..152477,152509..152643,152675..152742,152772..153056,153181..153335,153366..153764)	Theileria orientalis strain Shintoku	20713033
TOT_010000066	CDS	TOT_010000066	NC_025260.1	153850	154147	R	conserved hypothetical protein	complement(join(153850..153914,153945..154096,154131..154147))	Theileria orientalis strain Shintoku	20713034
TOT_010000067	CDS	TOT_010000067	NC_025260.1	155317	158203	D	importin subunit beta-1	join(155317..156805,156919..157870,158035..158203)	Theileria orientalis strain Shintoku	20713035
TOT_010001206	CDS	TOT_010001206	NC_025260.1	158713	158985	R	orotate phosphoribosyltransferase	complement(158713..158985)	Theileria orientalis strain Shintoku	20714005
TOT_010000069	CDS	TOT_010000069	NC_025260.1	159236	161941	D	conserved hypothetical protein	159236..161941	Theileria orientalis strain Shintoku	20713036
TOT_010000070	CDS	TOT_010000070	NC_025260.1	162077	162733	D	DNA repair Rad51/transcription factor NusA, alpha-helical domain containing protein; uncharacterized protein	join(162077..162244,162283..162388,162453..162733)	Theileria orientalis strain Shintoku	20713037
TOT_010000071	CDS	TOT_010000071	NC_025260.1	162777	165197	R	methyltransferase	complement(join(162777..163477,163653..163944,163988..164050,164093..164280,164321..164422,164464..164541,164576..165197))	Theileria orientalis strain Shintoku	20713038
TOT_010000072	CDS	TOT_010000072	NC_025260.1	165399	166467	D	conserved hypothetical protein	join(165399..165672,165758..165898,165929..166078,166271..166467)	Theileria orientalis strain Shintoku	20713039
TOT_010001207	CDS	TOT_010001207	NC_025260.1	166865	172628	R	HECT domain containing protein; uncharacterized protein	complement(join(166865..167164,167333..167442,167537..168815,168969..169442,169611..169960,170153..170765,170826..172460,172497..172628))	Theileria orientalis strain Shintoku	20714006
TOT_010000074	CDS	TOT_010000074	NC_025260.1	173127	173424	D	conserved hypothetical protein	join(173127..173204,173356..173424)	Theileria orientalis strain Shintoku	20713040
TOT_010000075	CDS	TOT_010000075	NC_025260.1	173870	174267	D	conserved hypothetical protein	join(173870..173921,173959..174045,174080..174267)	Theileria orientalis strain Shintoku	20713041
TOT_010000076	CDS	TOT_010000076	NC_025260.1	174364	175455	R	conserved hypothetical protein	complement(174364..175455)	Theileria orientalis strain Shintoku	20713042
TOT_010000077	CDS	TOT_010000077	NC_025260.1	176010	176524	D	conserved hypothetical protein	join(176010..176256,176288..176407,176439..176524)	Theileria orientalis strain Shintoku	20713043
TOT_010000078	CDS	TOT_010000078	NC_025260.1	176572	180052	R	protein phosphatase 2A regulatory subunit B	complement(join(176572..176718,176748..176891,176923..177405,177469..177550,177725..178953,179104..180016,180048..180052))	Theileria orientalis strain Shintoku	20713044
TOT_010000079	CDS	TOT_010000079	NC_025260.1	181105	182008	D	vesicle transport protein	join(181105..181198,181241..181302,181337..181411,181469..181556,181589..181674,181733..182008)	Theileria orientalis strain Shintoku	20713045
TOT_010001208	CDS	TOT_010001208	NC_025260.1	182097	183203	R	CUG-BP- and ETR-3-like factor 1	complement(join(182097..182221,182320..182475,182542..182850,182921..183203))	Theileria orientalis strain Shintoku	20714007
TOT_010000081	CDS	TOT_010000081	NC_025260.1	183575	186446	D	RNA-processing protein	join(183575..184446,184516..184693,184788..184888,184921..186061,186245..186438,186443..186446)	Theileria orientalis strain Shintoku	20713046
TOT_010000082	CDS	TOT_010000082	NC_025260.1	186533	189097	R	conserved hypothetical protein	complement(join(186533..186631,186659..189097))	Theileria orientalis strain Shintoku	20713047
TOT_010000083	CDS	TOT_010000083	NC_025260.1	189350	190993	D	polynucleotide kinase 3, phosphatase family protein; uncharacterized protein	join(189350..189391,189427..189644,189913..190322,190362..190525,190558..190764,190802..190993)	Theileria orientalis strain Shintoku	20713048
TOT_010000084	CDS	TOT_010000084	NC_025260.1	191167	199749	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(191167..191651,191735..192205,192402..193040,193227..193827,193928..196812,196881..199749))	Theileria orientalis strain Shintoku	20713049
TOT_010000085	CDS	TOT_010000085	NC_025260.1	200300	201109	R	cytochrome C oxidase subunit 2a	complement(200300..201109)	Theileria orientalis strain Shintoku	20713050
TOT_010000086	CDS	TOT_010000086	NC_025260.1	201558	202016	D	ISC system FeS cluster assembly, IscX family protein; uncharacterized protein	201558..202016	Theileria orientalis strain Shintoku	20713051
TOT_010000087	CDS	TOT_010000087	NC_025260.1	202156	203265	R	conserved hypothetical protein	complement(202156..203265)	Theileria orientalis strain Shintoku	20713052
TOT_010000088	CDS	TOT_010000088	NC_025260.1	203524	204437	R	conserved hypothetical protein	complement(join(203524..203700,203799..203852,203884..204194,204226..204283,204318..204437))	Theileria orientalis strain Shintoku	20713053
TOT_010000089	CDS	TOT_010000089	NC_025260.1	204524	205433	R	conserved hypothetical protein	complement(join(204524..204632,204660..204747,204859..204903,204935..204967,205000..205044,205074..205136,205243..205306,205338..205433))	Theileria orientalis strain Shintoku	20713054
TOT_010001209	CDS	TOT_010001209	NC_025260.1	205488	207584	R	heat shock protein 70	complement(205488..207584)	Theileria orientalis strain Shintoku	20714008
TOT_010000091	CDS	TOT_010000091	NC_025260.1	207944	212523	R	protein transport protein sec24-like	complement(join(207944..208335,208765..209127,209616..209729,209990..210244,210277..210583,210773..210841,210896..211090,211165..211529,211648..211881,211964..212119,212235..212523))	Theileria orientalis strain Shintoku	20713055
TOT_010000092	CDS	TOT_010000092	NC_025260.1	213157	215307	D	Skb1 methyltransferase family protein; uncharacterized protein	213157..215307	Theileria orientalis strain Shintoku	20713056
TOT_010000093	CDS	TOT_010000093	NC_025260.1	215751	216893	D	fructose-bisphosphate aldolase 2	215751..216893	Theileria orientalis strain Shintoku	20713057
TOT_010000094	CDS	TOT_010000094	NC_025260.1	217043	217741	D	prefoldin alpha subunit family protein; uncharacterized protein	join(217043..217153,217224..217498,217594..217741)	Theileria orientalis strain Shintoku	20713058
TOT_010000095	CDS	TOT_010000095	NC_025260.1	218055	220462	D	helicase-associated region domain containing protein; uncharacterized protein	join(218055..218307,218387..218833,218911..219647,219728..219909,219946..220033,220097..220284,220315..220462)	Theileria orientalis strain Shintoku	20713059
TOT_010000096	CDS	TOT_010000096	NC_025260.1	220766	221927	D	cytochrome C oxidase assembly protein-like	join(220766..221027,221073..221234,221333..221485,221550..221642,221721..221786,221842..221927)	Theileria orientalis strain Shintoku	20713060
TOT_010000097	CDS	TOT_010000097	NC_025260.1	222163	223259	R	conserved hypothetical protein	complement(join(222163..222243,222305..222361,222452..222577,222628..222765,222863..222990,223043..223094,223182..223259))	Theileria orientalis strain Shintoku	20713061
TOT_010000098	CDS	TOT_010000098	NC_025260.1	223541	225474	R	conserved hypothetical protein	complement(join(223541..224512,224561..224645,224747..225219,225289..225474))	Theileria orientalis strain Shintoku	20713062
TOT_010000099	CDS	TOT_010000099	NC_025260.1	225909	227476	D	KOW domain containing protein; uncharacterized protein	join(225909..226034,226092..226213,226276..226715,226747..226915,226955..227074,227106..227178,227255..227360,227427..227476)	Theileria orientalis strain Shintoku	20713063
TOT_010000100	CDS	TOT_010000100	NC_025260.1	227901	229024	R	ribosomal protein L22/L17 family protein; uncharacterized protein	complement(join(227901..228065,228134..228234,228298..228418,228484..228564,228595..228684,228718..228808,228849..228909,228943..229024))	Theileria orientalis strain Shintoku	20713064
TOT_010000101	CDS	TOT_010000101	NC_025260.1	229156	229848	R	conserved hypothetical protein	complement(join(229156..229365,229437..229511,229575..229630,229746..229848))	Theileria orientalis strain Shintoku	20713065
TOT_010000102	CDS	TOT_010000102	NC_025260.1	230081	231409	R	conserved hypothetical protein	complement(join(230081..230149,230202..230480,230511..230600,230630..230748,230914..231050,231083..231165,231197..231268,231305..231409))	Theileria orientalis strain Shintoku	20713066
TOT_010000103	CDS	TOT_010000103	NC_025260.1	231864	234744	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(231864..231900,231953..233769,233944..234744)	Theileria orientalis strain Shintoku	20713067
TOT_010000104	CDS	TOT_010000104	NC_025260.1	235134	239666	R	ABC transporter related domain containing protein; uncharacterized protein	complement(235134..239666)	Theileria orientalis strain Shintoku	20713068
TOT_010000105	CDS	TOT_010000105	NC_025260.1	240999	246085	R	conserved hypothetical protein	complement(join(240999..241357,241493..243203,243966..244721,244758..245194,245613..245762,245797..245869,245936..246085))	Theileria orientalis strain Shintoku	20713069
TOT_010000106	CDS	TOT_010000106	NC_025260.1	246248	247640	D	S-adenosyl-methyltransferase	join(246248..246571,246603..246766,246798..246966,247011..247106,247149..247262,247292..247480,247522..247565,247598..247640)	Theileria orientalis strain Shintoku	20713070
TOT_010000107	CDS	TOT_010000107	NC_025260.1	247637	247987	R	peptidylprolyl isomerase	complement(247637..247987)	Theileria orientalis strain Shintoku	20713071
TOT_010000108	CDS	TOT_010000108	NC_025260.1	248343	249981	D	TAP42-like protein family protein; uncharacterized protein	join(248343..248535,248576..249093,249161..249320,249399..249463,249498..249555,249587..249641,249671..249749,249877..249981)	Theileria orientalis strain Shintoku	20713072
TOT_010000109	CDS	TOT_010000109	NC_025260.1	250218	253477	R	predicted protein	complement(join(250218..250286,250399..250538,250612..251386,251462..253011,253057..253477))	Theileria orientalis strain Shintoku	20713073
TOT_010000110	CDS	TOT_010000110	NC_025260.1	253657	255187	R	glycosyl transferase, family 4 protein	complement(join(253657..253758,253789..253855,253888..253928,253959..254060,254090..254284,254315..254382,254422..254580,254707..254922,254959..255187))	Theileria orientalis strain Shintoku	20713074
TOT_010001210	CDS	TOT_010001210	NC_025260.1	255914	258534	D	long-chain-fatty-acid--CoA ligase	join(255914..255980,256020..256095,256129..256243,256275..256509,256569..256750,256780..256927,257000..257133,257227..257436,257628..258299,258331..258534)	Theileria orientalis strain Shintoku	20714009
TOT_010000112	CDS	TOT_010000112	NC_025260.1	259502	263219	D	tRNA-binding arm domain containing protein; uncharacterized protein	join(259502..259917,259947..260022,260058..260102,260200..260310,260340..260450,260542..260617,260686..260810,260849..261481,261496..261765,261803..262120,262162..262314,262351..262530,262854..262924,263022..263113,263158..263219)	Theileria orientalis strain Shintoku	20713075
TOT_010000113	CDS	TOT_010000113	NC_025260.1	263416	264799	R	conserved hypothetical protein	complement(join(263416..263497,263823..264244,264276..264427,264457..264799))	Theileria orientalis strain Shintoku	20713076
TOT_010000114	CDS	TOT_010000114	NC_025260.1	266195	268299	R	tRNA wybutosine-synthesizing protein 1 homolog	complement(join(266195..266329,266364..266421,266453..266562,266622..266762,266797..266912,266946..267048,267079..267447,267475..268299))	Theileria orientalis strain Shintoku	20713077
TOT_010000115	CDS	TOT_010000115	NC_025260.1	268392	270863	D	DNA-directed RNA polymerase subunit alpha	join(268392..268916,268947..269202,269233..269432,269462..269675,269725..269887,269919..270097,270162..270355,270473..270658,270732..270863)	Theileria orientalis strain Shintoku	20713078
TOT_010000116	CDS	TOT_010000116	NC_025260.1	270960	272728	R	ubiquitin-activating enzyme E1	complement(join(270960..271370,271414..272315,272347..272728))	Theileria orientalis strain Shintoku	20713079
TOT_010000117	CDS	TOT_010000117	NC_025260.1	273290	275278	D	zinc finger, ZZ-type domain containing protein; uncharacterized protein	join(273290..273468,273504..273742,273772..273839,273869..274003,274061..275278)	Theileria orientalis strain Shintoku	20713080
TOT_010000118	CDS	TOT_010000118	NC_025260.1	275873	277985	R	protein disulfide isomerase precursor	complement(join(275873..276066,276309..276433,276474..276652,276779..277237,277267..277641,277672..277827,277884..277985))	Theileria orientalis strain Shintoku	20713081
TOT_010000119	CDS	TOT_010000119	NC_025260.1	278267	281441	D	conserved hypothetical protein	join(278267..278455,278525..278668,278732..278803,278834..278959,278992..279135,279167..279313,279346..279616,279647..279694,279726..280178,280209..281218,281284..281352,281388..281441)	Theileria orientalis strain Shintoku	20713082
TOT_010000120	CDS	TOT_010000120	NC_025260.1	281643	282833	R	conserved hypothetical protein	complement(281643..282833)	Theileria orientalis strain Shintoku	20713083
TOT_010001211	CDS	TOT_010001211	NC_025260.1	283418	285035	D	conserved hypothetical protein	join(283418..283636,283671..283721,283782..284145,284179..284296,284341..284393,284433..284914,284946..285035)	Theileria orientalis strain Shintoku	20714010
TOT_010000122	CDS	TOT_010000122	NC_025260.1	285032	285610	R	conserved hypothetical protein	complement(285032..285610)	Theileria orientalis strain Shintoku	20713084
TOT_010000123	CDS	TOT_010000123	NC_025260.1	285883	286942	D	GTPase-activating protein	join(285883..286092,286128..286222,286255..286343,286373..286475,286507..286825,286856..286942)	Theileria orientalis strain Shintoku	20713085
TOT_010000124	CDS	TOT_010000124	NC_025260.1	287125	287704	R	conserved hypothetical protein	complement(join(287125..287511,287555..287704))	Theileria orientalis strain Shintoku	20713086
TOT_010000125	CDS	TOT_010000125	NC_025260.1	288164	288640	R	ribosomal protein L32p family protein; uncharacterized protein	complement(join(288164..288313,288344..288640))	Theileria orientalis strain Shintoku	20713087
TOT_010000126	CDS	TOT_010000126	NC_025260.1	288905	289850	D	tRNA/rRNA methyltransferase, SpoU domain containing protein; uncharacterized protein	join(288905..289046,289083..289768,289800..289850)	Theileria orientalis strain Shintoku	20713088
TOT_010000127	CDS	TOT_010000127	NC_025260.1	290190	291369	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(290190..290276,290307..290477,290557..291369)	Theileria orientalis strain Shintoku	20713089
TOT_010000128	CDS	TOT_010000128	NC_025260.1	291554	293112	D	chromatin assembly factor 1 protein	join(291554..291666,291697..291787,291822..291967,292009..292136,292167..292209,292239..292455,292558..292641,292721..293014,293050..293112)	Theileria orientalis strain Shintoku	20713090
TOT_010000129	CDS	TOT_010000129	NC_025260.1	293301	295691	R	conserved hypothetical protein	complement(293301..295691)	Theileria orientalis strain Shintoku	20713091
TOT_010000130	CDS	TOT_010000130	NC_025260.1	296078	299777	R	conserved hypothetical protein	complement(join(296078..299657,299713..299777))	Theileria orientalis strain Shintoku	20713092
TOT_010000131	CDS	TOT_010000131	NC_025260.1	299901	302994	R	histidyl-tRNA synthetase	complement(join(299901..300097,300197..301805,301913..302058,302089..302224,302290..302994))	Theileria orientalis strain Shintoku	20713093
TOT_010001212	CDS	TOT_010001212	NC_025260.1	303129	305316	D	ATP-dependent RNA helicase	join(303129..303439,303563..304016,304050..304256,304326..304438,304469..304609,304642..304799,304869..304991,305024..305076,305107..305253,305287..305316)	Theileria orientalis strain Shintoku	20714011
TOT_010001183	CDS	TOT_010001183	NC_025260.1	306340	308242	D	conserved hypothetical protein	join(306340..306685,306717..306886,306916..307047,307077..307280,307310..307549,307584..307833,307895..307967,308002..308242)	Theileria orientalis strain Shintoku	20713984
TOT_010000133	CDS	TOT_010000133	NC_025260.1	308334	310259	R	serine-threonine protein kinase	complement(join(308334..308468,308508..308568,308654..308751,308819..308934,309128..309260,309291..310259))	Theileria orientalis strain Shintoku	20713094
TOT_010000134	CDS	TOT_010000134	NC_025260.1	310289	311613	D	conserved hypothetical protein	join(310289..310455,310494..310579,310610..310735,310771..310920,310950..311038,311068..311124,311155..311238,311270..311344,311377..311447,311478..311613)	Theileria orientalis strain Shintoku	20713095
TOT_010000135	CDS	TOT_010000135	NC_025260.1	311971	314070	R	conserved hypothetical protein	complement(311971..314070)	Theileria orientalis strain Shintoku	20713096
TOT_010000136	CDS	TOT_010000136	NC_025260.1	314772	315187	R	conserved hypothetical protein	complement(join(314772..314834,314869..315014,315052..315187))	Theileria orientalis strain Shintoku	20713097
TOT_010000137	CDS	TOT_010000137	NC_025260.1	315351	317777	D	mitochondrial processing peptidase	join(315351..315752,315783..315874,315904..316084,316180..316260,316352..316420,316452..316659,316784..317151,317228..317437,317691..317777)	Theileria orientalis strain Shintoku	20713098
TOT_010000138	CDS	TOT_010000138	NC_025260.1	317975	320347	R	Spc97/Spc98 family protein; uncharacterized protein	complement(join(317975..320002,320101..320241,320294..320347))	Theileria orientalis strain Shintoku	20713099
TOT_010000139	CDS	TOT_010000139	NC_025260.1	320612	323614	R	tRNA-binding arm domain containing protein; uncharacterized protein	complement(join(320612..321071,321195..322140,322213..323376,323407..323614))	Theileria orientalis strain Shintoku	20713100
TOT_010001213	CDS	TOT_010001213	NC_025260.1	324168	324614	D	conserved hypothetical protein	324168..324614	Theileria orientalis strain Shintoku	20714012
TOT_010000141	CDS	TOT_010000141	NC_025260.1	325214	325807	R	hypothetical protein	complement(325214..325807)	Theileria orientalis strain Shintoku	20713101
TOT_010000142	CDS	TOT_010000142	NC_025260.1	326897	329831	R	DNA excision-repair helicase	complement(join(326897..327250,327282..328116,328221..328665,328710..329189,329242..329337,329369..329572,329690..329831))	Theileria orientalis strain Shintoku	20713102
TOT_010001214	CDS	TOT_010001214	NC_025260.1	330138	331349	R	ubiquitin regulatory protein	complement(join(330138..330890,331008..331121,331164..331349))	Theileria orientalis strain Shintoku	20714013
TOT_010001215	CDS	TOT_010001215	NC_025260.1	332044	335586	D	membrance occupation and recognition nexus protein 1	join(332044..333577,333809..335586)	Theileria orientalis strain Shintoku	20714014
TOT_010000145	CDS	TOT_010000145	NC_025260.1	335665	337295	R	membrance occupation and recognition nexus protein 1	complement(join(335665..335888,336033..336101,336254..336468,336484..336580,336612..336902,337010..337295))	Theileria orientalis strain Shintoku	20713103
TOT_010000146	CDS	TOT_010000146	NC_025260.1	337877	338468	D	conserved hypothetical protein	join(337877..338005,338153..338194,338277..338468)	Theileria orientalis strain Shintoku	20713104
TOT_010000147	CDS	TOT_010000147	NC_025260.1	338629	340809	R	Mpp10 protein family protein; uncharacterized protein	complement(338629..340809)	Theileria orientalis strain Shintoku	20713105
TOT_010000148	CDS	TOT_010000148	NC_025260.1	341276	343215	D	seryl-tRNA synthetase	join(341276..341279,341345..342646,342655..343118,343153..343215)	Theileria orientalis strain Shintoku	20713106
TOT_010000149	CDS	TOT_010000149	NC_025260.1	344010	344621	D	signal recognition particle	join(344010..344186,344278..344344,344449..344621)	Theileria orientalis strain Shintoku	20713107
TOT_010000150	CDS	TOT_010000150	NC_025260.1	344788	349365	R	membrane attack complex component/perforin/complement C9 family protein; uncharacterized protein	complement(join(344788..344957,345103..345211,345316..345513,345645..345929,346102..346935,347105..348011,348016..348499,348557..348712,348748..348953,349268..349365))	Theileria orientalis strain Shintoku	20713108
TOT_010000151	CDS	TOT_010000151	NC_025260.1	349796	351707	D	conserved hypothetical protein	join(349796..349981,350022..350741,350787..350871,350938..351138,351193..351707)	Theileria orientalis strain Shintoku	20713109
TOT_010000152	CDS	TOT_010000152	NC_025260.1	352152	355238	R	prolyl-tRNA synthetase	complement(join(352152..352286,352439..352544,352640..353377,353628..354001,354064..354183,354329..354635,354713..354852,354947..355084,355179..355238))	Theileria orientalis strain Shintoku	20713110
TOT_010000153	CDS	TOT_010000153	NC_025260.1	355433	358105	R	trimeric LpxA-like domain containing protein; uncharacterized protein	complement(join(355433..355714,355886..356031,356083..356114,356187..356317,356405..356802,356854..356860,356963..357404,357523..357644,357779..358105))	Theileria orientalis strain Shintoku	20713111
TOT_010000154	CDS	TOT_010000154	NC_025260.1	358309	358780	R	conserved hypothetical protein	complement(join(358309..358471,358545..358780))	Theileria orientalis strain Shintoku	20713112
TOT_010000155	CDS	TOT_010000155	NC_025260.1	359091	363423	D	conserved hypothetical protein	join(359091..359494,359634..359955,360006..360093,360286..360418,360526..360742,360865..363423)	Theileria orientalis strain Shintoku	20713113
TOT_010000156	CDS	TOT_010000156	NC_025260.1	363456	363572	R	hypothetical protein	complement(363456..363572)	Theileria orientalis strain Shintoku	20713114
TOT_010000157	CDS	TOT_010000157	NC_025260.1	363772	363921	R	conserved hypothetical protein	complement(363772..363921)	Theileria orientalis strain Shintoku	20713115
TOT_010001216	CDS	TOT_010001216	NC_025260.1	364104	365591	R	terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein; uncharacterized protein	complement(join(364104..364608,364756..365591))	Theileria orientalis strain Shintoku	20714015
TOT_010000159	CDS	TOT_010000159	NC_025260.1	365710	366295	D	conserved hypothetical protein	join(365710..365863,365918..366009,366080..366101,366132..366295)	Theileria orientalis strain Shintoku	20713116
TOT_010000160	CDS	TOT_010000160	NC_025260.1	366410	367130	R	adrenodoxin-like ferredoxin	complement(join(366410..366524,366672..366801,366878..366981,367024..367130))	Theileria orientalis strain Shintoku	20713117
TOT_010000161	CDS	TOT_010000161	NC_025260.1	367311	368600	D	conserved hypothetical protein	join(367311..367533,367625..367775,368028..368190,368413..368472,368502..368600)	Theileria orientalis strain Shintoku	20713118
TOT_010001217	CDS	TOT_010001217	NC_025260.1	368747	370053	D	conserved hypothetical protein	join(368747..368935,369232..369345,369504..369866,369973..370053)	Theileria orientalis strain Shintoku	20714016
TOT_010000164	CDS	TOT_010000164	NC_025260.1	370335	371066	D	2-cys peroxiredoxin	370335..371066	Theileria orientalis strain Shintoku	20713119
TOT_010000165	CDS	TOT_010000165	NC_025260.1	371089	371670	D	hypothetical protein	join(371089..371164,371473..371595,371615..371670)	Theileria orientalis strain Shintoku	20713120
TOT_010000166	CDS	TOT_010000166	NC_025260.1	371714	373224	D	conserved hypothetical protein	join(371714..372918,373089..373224)	Theileria orientalis strain Shintoku	20713121
TOT_010000167	CDS	TOT_010000167	NC_025260.1	373598	374329	R	30S ribosomal protein S11	complement(373598..374329)	Theileria orientalis strain Shintoku	20713122
TOT_010000168	CDS	TOT_010000168	NC_025260.1	374747	375978	R	ribosomal protein L36 family protein; uncharacterized protein	complement(join(374747..375519,375566..375742,375900..375978))	Theileria orientalis strain Shintoku	20713123
TOT_010000169	CDS	TOT_010000169	NC_025260.1	376459	378168	D	CTLH, C-terminal to LisH motif domain containing protein; uncharacterized protein	join(376459..376535,376590..376723,377104..377210,377362..377430,377512..377574,377719..377778,377870..377969,378003..378064,378100..378168)	Theileria orientalis strain Shintoku	20713124
TOT_010000170	CDS	TOT_010000170	NC_025260.1	378343	379146	R	Os01g0810000 protein; uncharacterized protein	complement(378343..379146)	Theileria orientalis strain Shintoku	20713125
TOT_010001218	CDS	TOT_010001218	NC_025260.1	379749	383270	R	DNA mismatch repair MutS family protein; uncharacterized protein	complement(join(379749..379843,379904..380294,380407..380531,380669..382113,382204..382363,382442..383270))	Theileria orientalis strain Shintoku	20714017
TOT_010001219	CDS	TOT_010001219	NC_025260.1	383825	385311	R	signal recognition particle, SRP72 subunit, RNA-binding domain containing protein; uncharacterized protein	complement(join(383825..383957,383990..384094,384191..384248,384279..384501,384709..384984,385183..385311))	Theileria orientalis strain Shintoku	20714018
TOT_010000173	CDS	TOT_010000173	NC_025260.1	385643	386885	R	conserved hypothetical protein	complement(join(385643..385803,385962..386696,386774..386885))	Theileria orientalis strain Shintoku	20713126
TOT_010000174	CDS	TOT_010000174	NC_025260.1	387151	387806	D	proteasome subunit beta type 2	join(387151..387477,387507..387806)	Theileria orientalis strain Shintoku	20713127
TOT_010000175	CDS	TOT_010000175	NC_025260.1	388049	388972	R	prohibitin	complement(join(388049..388776,388864..388972))	Theileria orientalis strain Shintoku	20713128
TOT_010000176	CDS	TOT_010000176	NC_025260.1	389142	390205	R	conserved hypothetical protein	complement(join(389142..389824,389857..390054,390100..390205))	Theileria orientalis strain Shintoku	20713129
TOT_010000177	CDS	TOT_010000177	NC_025260.1	390454	390821	D	chaperonin	join(390454..390456,390494..390619,390651..390821)	Theileria orientalis strain Shintoku	20713130
TOT_010000178	CDS	TOT_010000178	NC_025260.1	390955	391811	R	peptidyl-prolyl cis-trans isomerase	complement(join(390955..391020,391135..391312,391345..391685,391719..391811))	Theileria orientalis strain Shintoku	20713131
TOT_010000179	CDS	TOT_010000179	NC_025260.1	392152	393241	R	NifU protein	complement(join(392152..392264,392351..392805,392832..393241))	Theileria orientalis strain Shintoku	20713132
TOT_010000180	CDS	TOT_010000180	NC_025260.1	393562	395424	R	6-phosphogluconate dehydrogenase	complement(join(393562..393669,393736..393865,393897..393981,394087..394215,394248..394439,394522..394595,394628..394779,394809..394929,394962..395098,395131..395175,395206..395424))	Theileria orientalis strain Shintoku	20713133
TOT_010000181	CDS	TOT_010000181	NC_025260.1	395700	397509	R	actin	complement(join(395700..396280,396444..397509))	Theileria orientalis strain Shintoku	20713134
TOT_010000182	CDS	TOT_010000182	NC_025260.1	398099	400006	R	conserved hypothetical protein	complement(join(398099..398441,398537..398767,398835..398983,399050..400006))	Theileria orientalis strain Shintoku	20713135
TOT_010000183	CDS	TOT_010000183	NC_025260.1	400710	402347	D	conserved hypothetical protein	join(400710..400812,400842..400921,400953..402347)	Theileria orientalis strain Shintoku	20713136
TOT_010000184	CDS	TOT_010000184	NC_025260.1	402467	403172	R	hypothetical protein	complement(join(402467..402504,402545..402811,402843..402955,402994..403172))	Theileria orientalis strain Shintoku	20713137
TOT_010001220	CDS	TOT_010001220	NC_025260.1	403475	404343	R	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	complement(join(403475..403644,403717..403743,403872..403965,404023..404064,404099..404191,404224..404343))	Theileria orientalis strain Shintoku	20714019
TOT_010001221	CDS	TOT_010001221	NC_025260.1	404643	405156	R	conserved hypothetical protein	complement(join(404643..404986,405042..405156))	Theileria orientalis strain Shintoku	20714020
TOT_010000187	CDS	TOT_010000187	NC_025260.1	405303	405902	R	60S ribosomal protein L13	complement(405303..405902)	Theileria orientalis strain Shintoku	20713138
TOT_010000188	CDS	TOT_010000188	NC_025260.1	406504	406947	D	40S ribosomal protein S16	406504..406947	Theileria orientalis strain Shintoku	20713139
TOT_010001222	CDS	TOT_010001222	NC_025260.1	407126	408360	R	ATP synthase subunit gamma, mitochondrial precursor	complement(join(407126..407398,407429..407530,407697..407926,407958..408033,408066..408158,408190..408360))	Theileria orientalis strain Shintoku	20714021
TOT_010000190	CDS	TOT_010000190	NC_025260.1	408812	410992	D	LisH dimerisation motif domain containing protein; uncharacterized protein	join(408812..408843,408917..409127,409159..409387,409419..409603,409643..409813,409856..409951,409998..410055,410087..410156,410290..410369,410405..410571,410608..410850,410894..410992)	Theileria orientalis strain Shintoku	20713140
TOT_010000191	CDS	TOT_010000191	NC_025260.1	411307	413688	D	conserved hypothetical protein	join(411307..411458,411490..411679,411710..412013,412046..412137,412171..412278,412333..412404,412436..412480,412571..412762,412881..412952,412984..413055,413089..413190,413223..413408,413626..413688)	Theileria orientalis strain Shintoku	20713141
TOT_010000192	CDS	TOT_010000192	NC_025260.1	413903	415087	R	conserved hypothetical protein	complement(join(413903..414099,414131..414197,414299..414393,414435..414693,414725..415087))	Theileria orientalis strain Shintoku	20713142
TOT_010000193	CDS	TOT_010000193	NC_025260.1	415404	415979	D	protein of unknown function DUF1674 family protein; uncharacterized protein	join(415404..415713,415786..415979)	Theileria orientalis strain Shintoku	20713143
TOT_010000194	CDS	TOT_010000194	NC_025260.1	416024	416940	R	conserved hypothetical protein	complement(join(416024..416188,416219..416309,416340..416468,416501..416591,416623..416760,416796..416940))	Theileria orientalis strain Shintoku	20713144
TOT_010000195	CDS	TOT_010000195	NC_025260.1	417711	419831	D	Bromodomain protein	join(417711..419451,419530..419654,419688..419831)	Theileria orientalis strain Shintoku	20713145
TOT_010000196	CDS	TOT_010000196	NC_025260.1	420131	421147	R	succinate dehydrogenase	complement(join(420131..420192,420228..420414,420456..420635,420678..420920,420959..421147))	Theileria orientalis strain Shintoku	20713146
TOT_010000197	CDS	TOT_010000197	NC_025260.1	421220	423148	R	conserved hypothetical protein	complement(join(421220..421369,421508..422094,422126..422282,422322..422690,422895..422942,422975..423148))	Theileria orientalis strain Shintoku	20713147
TOT_010000198	CDS	TOT_010000198	NC_025260.1	423272	427679	R	autoaggregation-mediating protein	complement(join(423272..423971,423976..424580,424649..425466,425638..426869,427017..427482,427646..427679))	Theileria orientalis strain Shintoku	20713148
TOT_010000199	CDS	TOT_010000199	NC_025260.1	427944	428858	D	conserved hypothetical protein	join(427944..428012,428073..428858)	Theileria orientalis strain Shintoku	20713149
TOT_010000200	CDS	TOT_010000200	NC_025260.1	429165	432319	D	protein kinase-like domain containing protein; uncharacterized protein	join(429165..430952,431023..431103,431137..431386,431416..431612,431730..432060,432090..432319)	Theileria orientalis strain Shintoku	20713150
TOT_010000201	CDS	TOT_010000201	NC_025260.1	432511	435755	D	conserved hypothetical protein	join(432511..432648,432708..434364,434471..434557,434592..434677,434710..434833,434866..435755)	Theileria orientalis strain Shintoku	20713151
TOT_010000202	CDS	TOT_010000202	NC_025260.1	438498	439508	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	join(438498..439354,439385..439508)	Theileria orientalis strain Shintoku	20713152
TOT_010000203	CDS	TOT_010000203	NC_025260.1	439566	441393	D	tetratricopeptide region domain containing protein; uncharacterized protein	join(439566..439649,439752..440114,440470..441393)	Theileria orientalis strain Shintoku	20713153
TOT_010000204	CDS	TOT_010000204	NC_025260.1	441710	444173	R	glycerol-3-phosphate acyltransferase	complement(join(441710..441816,441881..442168,442216..442313,442347..442810,443170..443247,443282..443491,443522..443608,443662..443970,444000..444173))	Theileria orientalis strain Shintoku	20713154
TOT_010000205	CDS	TOT_010000205	NC_025260.1	444769	445555	D	conserved hypothetical protein	join(444769..445123,445154..445320,445352..445447,445478..445555)	Theileria orientalis strain Shintoku	20713155
TOT_010000206	CDS	TOT_010000206	NC_025260.1	445702	446417	R	conserved hypothetical protein	complement(join(445702..445905,445968..446238,446344..446417))	Theileria orientalis strain Shintoku	20713156
TOT_010000207	CDS	TOT_010000207	NC_025260.1	446495	446962	D	conserved hypothetical protein	join(446495..446590,446696..446962)	Theileria orientalis strain Shintoku	20713157
TOT_010001223	CDS	TOT_010001223	NC_025260.1	447067	447758	R	alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen domain containing protein; uncharacterized protein	complement(join(447067..447160,447199..447305,447334..447581,447614..447758))	Theileria orientalis strain Shintoku	20714022
TOT_010001224	CDS	TOT_010001224	NC_025260.1	447990	448599	R	DNA-directed RNA polymerase II	complement(join(447990..448283,448351..448599))	Theileria orientalis strain Shintoku	20714023
TOT_010000210	CDS	TOT_010000210	NC_025260.1	448832	449084	D	conserved hypothetical protein	join(448832..449001,449060..449084)	Theileria orientalis strain Shintoku	20713158
TOT_010000211	CDS	TOT_010000211	NC_025260.1	449463	450186	R	centrin 3	complement(join(449463..449512,449546..449615,449654..449697,449736..449813,449852..449966,450013..450186))	Theileria orientalis strain Shintoku	20713159
TOT_010000212	CDS	TOT_010000212	NC_025260.1	451270	451505	R	hypothetical protein	complement(join(451270..451352,451424..451505))	Theileria orientalis strain Shintoku	20713160
TOT_010000213	CDS	TOT_010000213	NC_025260.1	451576	465660	D	E3 ubiquitin-protein ligase HUWE1	join(451576..451728,451760..451847,451877..452565,452842..452964,453133..454844,455040..458949,459001..463215,463276..465660)	Theileria orientalis strain Shintoku	20713161
TOT_010000214	CDS	TOT_010000214	NC_025260.1	466249	467709	R	conserved hypothetical protein	complement(466249..467709)	Theileria orientalis strain Shintoku	20713162
TOT_010000215	CDS	TOT_010000215	NC_025260.1	468678	470330	R	Sof1-like protein domain containing protein; uncharacterized protein	complement(join(468678..468758,468793..469186,469219..469588,469621..469690,469722..469894,469925..470027,470061..470186,470208..470330))	Theileria orientalis strain Shintoku	20713163
TOT_010000216	CDS	TOT_010000216	NC_025260.1	471284	471871	D	conserved hypothetical protein	join(471284..471404,471435..471871)	Theileria orientalis strain Shintoku	20713164
TOT_010000217	CDS	TOT_010000217	NC_025260.1	472058	472599	D	DNA-directed RNA polymerases I, II, and III subunit	join(472058..472219,472257..472408,472476..472599)	Theileria orientalis strain Shintoku	20713165
TOT_010001184	CDS	TOT_010001184	NC_025260.1	472718	473014	R	dynein light chain 1	complement(472718..473014)	Theileria orientalis strain Shintoku	20713985
TOT_010000218	CDS	TOT_010000218	NC_025260.1	473243	476548	R	eukaryotic translation initiation factor 3 subunit 10	complement(join(473243..474014,474039..474552,474766..476548))	Theileria orientalis strain Shintoku	20713166
TOT_010001225	CDS	TOT_010001225	NC_025260.1	477438	479429	D	S1, RNA binding domain containing protein; uncharacterized protein	477438..479429	Theileria orientalis strain Shintoku	20714024
TOT_010000220	CDS	TOT_010000220	NC_025260.1	479644	481005	D	pre-rRNA processing protein	join(479644..479865,479897..480201,480232..480361,480461..480609,480653..480856,480900..481005)	Theileria orientalis strain Shintoku	20713167
TOT_010000221	CDS	TOT_010000221	NC_025260.1	481191	482236	D	RNA-binding motif protein, X-linked 2	join(481191..481320,481361..481459,481494..481645,481742..482236)	Theileria orientalis strain Shintoku	20713168
TOT_010000222	CDS	TOT_010000222	NC_025260.1	482827	484611	D	conserved hypothetical protein	482827..484611	Theileria orientalis strain Shintoku	20713169
TOT_010000223	CDS	TOT_010000223	NC_025260.1	484817	486477	D	zinc finger, CCCH-type domain containing protein; uncharacterized protein	join(484817..484886,484928..485024,485066..485130,485162..485882,486138..486477)	Theileria orientalis strain Shintoku	20713170
TOT_010000224	CDS	TOT_010000224	NC_025260.1	486942	489099	R	T-complex protein 1 delta subunit	complement(join(486942..487245,487342..487568,487756..487908,488063..488479,488509..488601,488632..488790,488821..488963,489000..489099))	Theileria orientalis strain Shintoku	20713171
TOT_010000225	CDS	TOT_010000225	NC_025260.1	489898	493020	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(489898..490882,490913..491020,491050..491414,491447..491575,491605..491706,491738..491845,491982..492624,492655..492731,492763..493020)	Theileria orientalis strain Shintoku	20713172
TOT_010000226	CDS	TOT_010000226	NC_025260.1	493249	497861	D	CPSF A subunit, C-terminal domain containing protein; uncharacterized protein	join(493249..493605,493645..496221,496252..497230,497407..497861)	Theileria orientalis strain Shintoku	20713173
TOT_010000227	CDS	TOT_010000227	NC_025260.1	498109	504498	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(498109..498195,498234..503604,503635..504132,504164..504498))	Theileria orientalis strain Shintoku	20713174
TOT_010001226	CDS	TOT_010001226	NC_025260.1	505878	507245	D	conserved hypothetical protein	505878..507245	Theileria orientalis strain Shintoku	20714025
TOT_010000229	CDS	TOT_010000229	NC_025260.1	507719	508220	D	conserved hypothetical protein	join(507719..507964,507996..508079,508113..508220)	Theileria orientalis strain Shintoku	20713175
TOT_010000230	CDS	TOT_010000230	NC_025260.1	508477	510340	R	conserved hypothetical protein	complement(join(508477..508599,508632..508831,508862..509044,509076..509128,509159..509186,509221..509255,509623..509731,509764..509810,509838..509944,509977..510044,510076..510340))	Theileria orientalis strain Shintoku	20713176
TOT_010000231	CDS	TOT_010000231	NC_025260.1	510600	510929	R	thioredoxin-related domain containing protein; uncharacterized protein	complement(join(510600..510756,510847..510929))	Theileria orientalis strain Shintoku	20713177
TOT_010000232	CDS	TOT_010000232	NC_025260.1	511543	513704	D	ABC transporter	join(511543..512281,512312..512364,512402..512579,512616..512680,512780..512878,512921..513383,513412..513511,513542..513704)	Theileria orientalis strain Shintoku	20713178
TOT_010000233	CDS	TOT_010000233	NC_025260.1	513816	515724	D	immunoglobulin E-set domain containing protein; uncharacterized protein	join(513816..514179,514210..514270,514302..515029,515059..515459,515527..515724)	Theileria orientalis strain Shintoku	20713179
TOT_010000234	CDS	TOT_010000234	NC_025260.1	515843	517006	R	concanavalin A-like lectin/glucanase domain containing protein; uncharacterized protein	complement(join(515843..516157,516198..516272,516304..516324,516356..516650,516692..516890,516922..517006))	Theileria orientalis strain Shintoku	20713180
TOT_010000235	CDS	TOT_010000235	NC_025260.1	517646	519383	D	tRNA-His guanylyltransferase family protein; uncharacterized protein	join(517646..517962,517995..518164,518198..518283,518317..518396,518429..518687,519051..519383)	Theileria orientalis strain Shintoku	20713181
TOT_010000236	CDS	TOT_010000236	NC_025260.1	519566	521156	D	acyl transferase	join(519566..519646,519678..519796,520152..520394,520425..520530,520560..520679,520711..520971,521002..521067,521100..521156)	Theileria orientalis strain Shintoku	20713182
TOT_010000237	CDS	TOT_010000237	NC_025260.1	521477	523376	D	prefoldin domain containing protein; uncharacterized protein	join(521477..521567,521628..521756,521794..523376)	Theileria orientalis strain Shintoku	20713183
TOT_010000238	CDS	TOT_010000238	NC_025260.1	523386	524760	R	mRNA capping enzyme subunit	complement(join(523386..523529,523540..524760))	Theileria orientalis strain Shintoku	20713184
TOT_010001227	CDS	TOT_010001227	NC_025260.1	525132	525965	D	peptidyl-prolyl cis-trans isomerase	join(525132..525374,525404..525495,525527..525773,525805..525902,525938..525965)	Theileria orientalis strain Shintoku	20714026
TOT_010000240	CDS	TOT_010000240	NC_025260.1	526000	526734	R	conserved hypothetical protein	complement(526000..526734)	Theileria orientalis strain Shintoku	20713185
TOT_010000241	CDS	TOT_010000241	NC_025260.1	527370	529225	D	dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor	join(527370..527580,527612..527800,527830..528125,528156..528378,528458..528585,528663..528747,528777..528839,529050..529225)	Theileria orientalis strain Shintoku	20713186
TOT_010000243	CDS	TOT_010000243	NC_025260.1	529894	538773	R	TRAF-like domain containing protein; uncharacterized protein	complement(join(529894..531485,531576..531843,531955..533437,533525..534066,534169..535122,535186..535998,536233..538773))	Theileria orientalis strain Shintoku	20713187
TOT_010001228	CDS	TOT_010001228	NC_025260.1	539701	541651	R	glutathione synthetase	complement(join(539701..540180,540211..541001,541033..541651))	Theileria orientalis strain Shintoku	20714027
TOT_010000245	CDS	TOT_010000245	NC_025260.1	542736	544681	D	glutathione synthetase	join(542736..543354,543387..544171,544202..544681)	Theileria orientalis strain Shintoku	20713188
TOT_010000246	CDS	TOT_010000246	NC_025260.1	545252	547432	D	conserved hypothetical protein	join(545252..545324,545379..545450,545486..545718,545794..546121,546154..547322,547337..547432)	Theileria orientalis strain Shintoku	20713189
TOT_010000247	CDS	TOT_010000247	NC_025260.1	547464	547906	R	prefoldin subunit	complement(join(547464..547548,547581..547705,547740..547810,547867..547906))	Theileria orientalis strain Shintoku	20713190
TOT_010000248	CDS	TOT_010000248	NC_025260.1	548099	548499	R	conserved hypothetical protein	complement(join(548099..548361,548406..548499))	Theileria orientalis strain Shintoku	20713191
TOT_010001229	CDS	TOT_010001229	NC_025260.1	548606	550043	R	dihydrouridine synthase, DuS family protein; uncharacterized protein	complement(join(548606..548906,548938..549142,549216..549333,549364..549472,549503..549561,549593..549681,549714..549796,549829..549885,549919..550043))	Theileria orientalis strain Shintoku	20714028
TOT_010000250	CDS	TOT_010000250	NC_025260.1	550363	550982	R	conserved hypothetical protein	complement(join(550363..550453,550493..550752,550794..550982))	Theileria orientalis strain Shintoku	20713192
TOT_010000251	CDS	TOT_010000251	NC_025260.1	551022	553367	R	conserved hypothetical protein	complement(join(551022..551108,551155..551742,551782..551880,552013..552616,552748..553367))	Theileria orientalis strain Shintoku	20713193
TOT_010000252	CDS	TOT_010000252	NC_025260.1	553528	554228	D	kinase binding protein CGI-121 family protein; uncharacterized protein	join(553528..553791,553822..553944,553973..554056,554076..554228)	Theileria orientalis strain Shintoku	20713194
TOT_010001230	CDS	TOT_010001230	NC_025260.1	554331	557226	R	MORN motif repeat containing protein	complement(join(554331..555367,555582..557226))	Theileria orientalis strain Shintoku	20714029
TOT_010001231	CDS	TOT_010001231	NC_025260.1	557266	560197	R	conserved hypothetical protein	complement(join(557266..557355,557567..557624,557655..557762,558549..558690,559312..559516,559547..560197))	Theileria orientalis strain Shintoku	20714030
TOT_010000255	CDS	TOT_010000255	NC_025260.1	560892	561538	D	translationally-controlled tumor protein homolog TCTP	join(560892..560985,561072..561135,561175..561538)	Theileria orientalis strain Shintoku	20713195
TOT_010000256	CDS	TOT_010000256	NC_025260.1	561727	562622	D	conserved hypothetical protein	join(561727..562032,562077..562622)	Theileria orientalis strain Shintoku	20713196
TOT_010000257	CDS	TOT_010000257	NC_025260.1	562742	565669	R	translation elongation factor G	complement(join(562742..563339,563387..563547,563589..563777,563823..563999,564033..564094,564127..564303,564337..564545,564577..564690,564702..564859,564889..564996,565028..565185,565217..565312,565348..565669))	Theileria orientalis strain Shintoku	20713197
TOT_010000258	CDS	TOT_010000258	NC_025260.1	565991	567340	D	developmentally regulated GTP-binding protein 1	join(565991..566120,566159..566584,566689..566954,567062..567340)	Theileria orientalis strain Shintoku	20713198
TOT_010000259	CDS	TOT_010000259	NC_025260.1	567540	567937	D	histone-fold domain containing protein; uncharacterized protein	join(567540..567719,567749..567937)	Theileria orientalis strain Shintoku	20713199
TOT_010000260	CDS	TOT_010000260	NC_025260.1	567965	571169	R	SET domain containing protein; uncharacterized protein	complement(join(567965..568040,568071..568256,568520..568598,568752..568909,568941..569855,569970..570310,570399..571169))	Theileria orientalis strain Shintoku	20713200
TOT_010000261	CDS	TOT_010000261	NC_025260.1	571440	572413	R	hypothetical protein	complement(join(571440..571511,571623..571727,571757..571842,571873..571940,571975..572057,572099..572413))	Theileria orientalis strain Shintoku	20713201
TOT_010001232	CDS	TOT_010001232	NC_025260.1	572470	576879	R	importin beta	complement(join(572470..572685,572973..574112,574523..574746,575151..576879))	Theileria orientalis strain Shintoku	20714031
TOT_010000263	CDS	TOT_010000263	NC_025260.1	577344	579276	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(577344..577451,577540..577890,577922..578079,578113..578198,578228..578400,578434..578519,578558..578824,578858..578949,579056..579276)	Theileria orientalis strain Shintoku	20713202
TOT_010001233	CDS	TOT_010001233	NC_025260.1	579469	580218	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(579469..579567,579710..580006,580038..580102,580164..580218))	Theileria orientalis strain Shintoku	20714032
TOT_010000265	CDS	TOT_010000265	NC_025260.1	580573	585493	D	structural maintenance of chromosome protein, type 1	join(580573..580852,580888..581114,581145..581296,581338..581503,581537..581625,581714..582194,582506..585493)	Theileria orientalis strain Shintoku	20713203
TOT_010000266	CDS	TOT_010000266	NC_025260.1	585624	585897	R	ubiquitin-fold modifier 1 precursor	complement(join(585624..585697,585728..585800,585832..585897))	Theileria orientalis strain Shintoku	20713204
TOT_010000267	CDS	TOT_010000267	NC_025260.1	586189	589192	R	conserved hypothetical protein	complement(join(586189..586284,586321..586452,586484..586546,586576..586662,586695..586790,586829..586962,587074..588353,588384..589192))	Theileria orientalis strain Shintoku	20713205
TOT_010000268	CDS	TOT_010000268	NC_025260.1	589665	591684	D	26S proteasome regulatory particle	join(589665..589889,589971..590072,590196..590412,590497..590553,590643..590707,590769..590895,591024..591245,591357..591469,591556..591684)	Theileria orientalis strain Shintoku	20713206
TOT_010000269	CDS	TOT_010000269	NC_025260.1	592015	593567	R	conserved hypothetical protein	complement(join(592015..592166,592353..593055,593100..593405,593496..593567))	Theileria orientalis strain Shintoku	20713207
TOT_010001234	CDS	TOT_010001234	NC_025260.1	594063	595550	D	hydroxyacylglutathione hydrolase	join(594063..594260,594292..594481,594569..594682,594718..594825,594919..595060,595195..595300,595440..595550)	Theileria orientalis strain Shintoku	20714033
TOT_010000271	CDS	TOT_010000271	NC_025260.1	595766	596002	R	60S ribosomal protein L38	complement(595766..596002)	Theileria orientalis strain Shintoku	20713208
TOT_010000272	CDS	TOT_010000272	NC_025260.1	596953	597894	R	60S acidic ribosomal protein P0	complement(596953..597894)	Theileria orientalis strain Shintoku	20713209
TOT_010000273	CDS	TOT_010000273	NC_025260.1	598596	602343	D	pectin lyase fold/virulence factor domain containing protein; uncharacterized protein	join(598596..598635,598704..598864,599011..599158,599290..599527,599559..599703,599769..599934,599992..600065,600212..600316,600394..600506,600638..600702,600766..601604,601875..602175,602270..602343)	Theileria orientalis strain Shintoku	20713210
TOT_010000274	CDS	TOT_010000274	NC_025260.1	602446	603194	D	conserved hypothetical protein	join(602446..602668,602800..602900,603054..603194)	Theileria orientalis strain Shintoku	20713211
TOT_010000275	CDS	TOT_010000275	NC_025260.1	603480	603878	D	conserved hypothetical protein	603480..603878	Theileria orientalis strain Shintoku	20713212
TOT_010001235	CDS	TOT_010001235	NC_025260.1	604091	605472	R	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	complement(join(604091..604368,604435..604539,604640..604820,604861..605173,605301..605394,605451..605472))	Theileria orientalis strain Shintoku	20714034
TOT_010001236	CDS	TOT_010001236	NC_025260.1	606916	608546	R	Os05g0104900 protein; uncharacterized protein	complement(join(606916..606949,607048..607119,607230..607333,607462..607608,607730..607894,607989..608087,608211..608546))	Theileria orientalis strain Shintoku	20714035
TOT_010001237	CDS	TOT_010001237	NC_025260.1	608921	610468	R	glycerol-3-phosphate dehydrogenase	complement(join(608921..609070,609175..609327,609411..609692,609780..609950,610019..610210,610281..610370,610451..610468))	Theileria orientalis strain Shintoku	20714036
TOT_010000279	CDS	TOT_010000279	NC_025260.1	610989	615126	D	serine/threonine protein kinase	join(610989..611426,611512..611572,611657..612714,612853..613017,613186..613496,613606..613712,613914..614137,614609..615012,615111..615126)	Theileria orientalis strain Shintoku	20713213
TOT_010000280	CDS	TOT_010000280	NC_025260.1	615359	615916	D	conserved hypothetical protein	join(615359..615397,615641..615916)	Theileria orientalis strain Shintoku	20713214
TOT_010000281	CDS	TOT_010000281	NC_025260.1	616081	616841	R	conserved hypothetical protein	complement(join(616081..616182,616213..616318,616444..616660,616721..616841))	Theileria orientalis strain Shintoku	20713215
TOT_010000282	CDS	TOT_010000282	NC_025260.1	617182	623136	D	conserved hypothetical protein	join(617182..620366,620497..622086,622251..623031,623110..623136)	Theileria orientalis strain Shintoku	20713216
TOT_010000283	CDS	TOT_010000283	NC_025260.1	623224	624301	D	3'-5' exoribonuclease	join(623224..623361,623418..623575,623710..623794,623915..623996,624026..624092,624280..624301)	Theileria orientalis strain Shintoku	20713217
TOT_010000284	CDS	TOT_010000284	NC_025260.1	624331	625275	R	conserved hypothetical protein	complement(624331..625275)	Theileria orientalis strain Shintoku	20713218
TOT_010000285	CDS	TOT_010000285	NC_025260.1	625410	626708	D	molecular chaperone	join(625410..625586,625652..625791,625826..625881,625941..625988,626018..626061,626118..626203,626277..626469,626499..626708)	Theileria orientalis strain Shintoku	20713219
TOT_010001238	CDS	TOT_010001238	NC_025260.1	626782	627228	R	ELM2 domain containing protein; uncharacterized protein	complement(626782..627228)	Theileria orientalis strain Shintoku	20714037
TOT_010000287	CDS	TOT_010000287	NC_025260.1	627949	629273	D	conserved hypothetical protein	join(627949..628080,628152..628278,628442..628537,628601..628661,628757..628854,628897..628931,628962..629162,629232..629273)	Theileria orientalis strain Shintoku	20713220
TOT_010001239	CDS	TOT_010001239	NC_025260.1	629476	631179	D	eukaryotic translation initiation factor	join(629476..629491,629687..629841,629972..630169,630235..630312,630425..630505,630606..630718,630888..630999,631147..631179)	Theileria orientalis strain Shintoku	20714038
TOT_010001240	CDS	TOT_010001240	NC_025260.1	631372	632687	R	conserved hypothetical protein	complement(join(631372..631430,631499..632687))	Theileria orientalis strain Shintoku	20714039
TOT_010000290	CDS	TOT_010000290	NC_025260.1	632837	636853	D	predicted protein	join(632837..632937,633008..633187,633258..633360,633419..633493,633552..633670,633753..633834,633905..633985,634077..634144,634251..634364,634503..634617,634712..634859,634998..635045,635153..635289,635488..635631,635711..636004,636488..636853)	Theileria orientalis strain Shintoku	20713221
TOT_010001241	CDS	TOT_010001241	NC_025260.1	637002	637760	R	conserved hypothetical protein	complement(637002..637760)	Theileria orientalis strain Shintoku	20714040
TOT_010000292	CDS	TOT_010000292	NC_025260.1	637873	638237	D	hypothetical protein	join(637873..638162,638189..638237)	Theileria orientalis strain Shintoku	20713222
TOT_010000293	CDS	TOT_010000293	NC_025260.1	638400	640777	R	serine protease	complement(join(638400..638759,638847..638960,639066..639168,639210..639336,639411..639676,639818..640057,640128..640214,640293..640777))	Theileria orientalis strain Shintoku	20713223
TOT_010000294	CDS	TOT_010000294	NC_025260.1	641108	641704	R	potential glutaredoxin	complement(join(641108..641164,641205..641266,641301..641367,641399..641704))	Theileria orientalis strain Shintoku	20713224
TOT_010000295	CDS	TOT_010000295	NC_025260.1	642301	645371	D	conserved hypothetical protein	join(642301..643694,643827..644069,644240..644557,644947..645171,645248..645371)	Theileria orientalis strain Shintoku	20713225
TOT_010000296	CDS	TOT_010000296	NC_025260.1	645704	646121	D	PV1H14220_P-like; uncharacterized protein	join(645704..645969,645998..646121)	Theileria orientalis strain Shintoku	20713226
TOT_010000297	CDS	TOT_010000297	NC_025260.1	646143	648139	R	tubulin subunit alpha	complement(join(646143..646179,646233..646586,646695..646954,647068..647583,647743..647869,648078..648139))	Theileria orientalis strain Shintoku	20713227
TOT_010001242	CDS	TOT_010001242	NC_025260.1	650154	653996	D	conserved hypothetical protein	join(650154..650423,650589..650817,650989..651902,652047..652861,652964..653996)	Theileria orientalis strain Shintoku	20714041
TOT_010000299	CDS	TOT_010000299	NC_025260.1	654312	655282	R	conserved hypothetical protein	complement(join(654312..654703,654769..655093,655280..655282))	Theileria orientalis strain Shintoku	20713228
TOT_010000300	CDS	TOT_010000300	NC_025260.1	655414	663978	R	predicted protein	complement(join(655414..662340,662590..662678,662910..663978))	Theileria orientalis strain Shintoku	20713229
TOT_010000301	CDS	TOT_010000301	NC_025260.1	664249	665301	R	protein of unknown function UPF0054 family protein; uncharacterized protein	complement(join(664249..664348,664390..664479,664512..664590,664630..664835,664961..665301))	Theileria orientalis strain Shintoku	20713230
TOT_010001243	CDS	TOT_010001243	NC_025260.1	665699	666670	R	conserved hypothetical protein	complement(join(665699..665817,665848..666008,666074..666140,666214..666252,666289..666450,666541..666670))	Theileria orientalis strain Shintoku	20714042
TOT_010000303	CDS	TOT_010000303	NC_025260.1	666776	668066	R	Os02g0114700 protein; uncharacterized protein	complement(join(666776..666913,667029..667326,667428..667671,667790..668066))	Theileria orientalis strain Shintoku	20713231
TOT_010000304	CDS	TOT_010000304	NC_025260.1	668502	669287	D	Bet3 transport protein	join(668502..668561,668601..668698,668795..668894,668925..669107,669186..669287)	Theileria orientalis strain Shintoku	20713232
TOT_010001244	CDS	TOT_010001244	NC_025260.1	669393	669719	R	hypothetical protein	complement(669393..669719)	Theileria orientalis strain Shintoku	20714043
TOT_010000306	CDS	TOT_010000306	NC_025260.1	670380	671641	R	conserved hypothetical protein	complement(join(670380..671444,671519..671641))	Theileria orientalis strain Shintoku	20713233
TOT_010000307	CDS	TOT_010000307	NC_025260.1	672564	674582	D	eukaryotic translation initiation factor 2 subunit gamma	join(672564..672599,672634..672712,672794..672905,672954..673091,673263..673516,673597..673909,673953..674138,674306..674582)	Theileria orientalis strain Shintoku	20713234
TOT_010001245	CDS	TOT_010001245	NC_025260.1	674640	675351	R	TB2/DP1 and HVA22 related protein family protein; uncharacterized protein	complement(join(674640..674797,674835..675351))	Theileria orientalis strain Shintoku	20714044
TOT_010001246	CDS	TOT_010001246	NC_025260.1	675652	676994	R	0; Conserved hypothetical protein	complement(join(675652..675718,675801..675872,675932..676027,676121..676209,676332..676456,676534..676673,676744..676994))	Theileria orientalis strain Shintoku	20714045
TOT_010000309	CDS	TOT_010000309	NC_025260.1	677328	677779	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(677328..677469,677524..677676,677718..677779)	Theileria orientalis strain Shintoku	20713235
TOT_010000310	CDS	TOT_010000310	NC_025260.1	677881	679247	R	zinc finger, DHHC-type domain containing protein; uncharacterized protein	complement(join(677881..677936,677968..678107,678205..678278,678389..678497,678569..678656,678712..678911,678945..679041,679157..679247))	Theileria orientalis strain Shintoku	20713236
TOT_010000311	CDS	TOT_010000311	NC_025260.1	679406	686982	D	conserved hypothetical protein	join(679406..682114,682424..685039,685193..686176,686218..686466,686572..686982)	Theileria orientalis strain Shintoku	20713237
TOT_010000312	CDS	TOT_010000312	NC_025260.1	687420	688286	D	hypothetical protein	687420..688286	Theileria orientalis strain Shintoku	20713238
TOT_010000313	CDS	TOT_010000313	NC_025260.1	688428	688592	R	hypothetical protein	complement(688428..688592)	Theileria orientalis strain Shintoku	20713239
TOT_010000314	CDS	TOT_010000314	NC_025260.1	688646	690767	R	actin/actin-like family protein; uncharacterized protein	complement(join(688646..688813,688884..689059,689260..689602,689795..689923,689955..690767))	Theileria orientalis strain Shintoku	20713240
TOT_010000315	CDS	TOT_010000315	NC_025260.1	690916	692914	D	conserved hypothetical protein	join(690916..691065,691129..691365,691515..691582,691945..692914)	Theileria orientalis strain Shintoku	20713241
TOT_010000316	CDS	TOT_010000316	NC_025260.1	693376	695381	R	zinc finger, ZPR1-type domain containing protein; uncharacterized protein	complement(join(693376..693776,693812..694024,694112..694304,694435..694542,694617..694858,694917..694965,695033..695151,695222..695381))	Theileria orientalis strain Shintoku	20713242
TOT_010000317	CDS	TOT_010000317	NC_025260.1	696204	698045	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(696204..696953,697182..698045)	Theileria orientalis strain Shintoku	20713243
TOT_010000318	CDS	TOT_010000318	NC_025260.1	698347	699758	R	Shwachman-Bodian-Diamond syndrome proteins family protein; uncharacterized protein	complement(join(698347..699362,699395..699541,699632..699758))	Theileria orientalis strain Shintoku	20713244
TOT_010000319	CDS	TOT_010000319	NC_025260.1	700198	701076	D	conserved hypothetical protein	700198..701076	Theileria orientalis strain Shintoku	20713245
TOT_010000320	CDS	TOT_010000320	NC_025260.1	701324	703920	D	RAP domain containing protein; uncharacterized protein	join(701324..701657,701692..702302,702341..702458,702488..702588,702675..703019,703103..703385,703428..703473,703604..703699,703809..703920)	Theileria orientalis strain Shintoku	20713246
TOT_010000321	CDS	TOT_010000321	NC_025260.1	704383	706011	R	conserved hypothetical protein	complement(join(704383..704580,704611..704631,704696..704814,704870..704930,704974..705042,705227..705408,705519..705685,705721..705766,705822..706011))	Theileria orientalis strain Shintoku	20713247
TOT_010000322	CDS	TOT_010000322	NC_025260.1	706358	706911	R	ribosomal protein S18	complement(join(706358..706439,706451..706911))	Theileria orientalis strain Shintoku	20713248
TOT_010000323	CDS	TOT_010000323	NC_025260.1	707443	708077	R	60S ribosomal protein L11a	complement(join(707443..707603,707686..707971,708009..708077))	Theileria orientalis strain Shintoku	20713249
TOT_010000324	CDS	TOT_010000324	NC_025260.1	708649	710802	R	conserved hypothetical protein	complement(join(708649..708971,709005..709068,709135..709292,709326..709455,709550..709617,709704..709816,709873..709988,710065..710148,710179..710614,710648..710802))	Theileria orientalis strain Shintoku	20713250
TOT_010000325	CDS	TOT_010000325	NC_025260.1	710905	715078	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(710905..711019,711063..711643,711807..711883,711984..712095,712139..712324,712391..712447,712603..712683,713073..713192,713274..714136,714374..714692,714767..715078))	Theileria orientalis strain Shintoku	20713251
TOT_010000326	CDS	TOT_010000326	NC_025260.1	716162	718024	D	Map2 kinase	716162..718024	Theileria orientalis strain Shintoku	20713252
TOT_010000327	CDS	TOT_010000327	NC_025260.1	718242	720038	R	RabGAP/TBC domain containing protein; uncharacterized protein	complement(join(718242..718631,718718..718799,718862..719015,719032..719146,719224..719392,719506..719574,719606..719698,719791..720038))	Theileria orientalis strain Shintoku	20713253
TOT_010000328	CDS	TOT_010000328	NC_025260.1	720404	722269	R	conserved hypothetical protein	complement(join(720404..720509,720593..720891,720933..721015,721045..721109,721149..721196,721232..721479,721510..721607,721640..721892,721940..722269))	Theileria orientalis strain Shintoku	20713254
TOT_010000329	CDS	TOT_010000329	NC_025260.1	722668	723627	D	Gmp reductase	722668..723627	Theileria orientalis strain Shintoku	20713255
TOT_010000330	CDS	TOT_010000330	NC_025260.1	724238	725849	D	proliferation-associated protein 2g4	join(724238..724394,724550..724641,724673..724782,724934..725672,725805..725849)	Theileria orientalis strain Shintoku	20713256
TOT_010000331	CDS	TOT_010000331	NC_025260.1	726188	727185	D	conserved hypothetical protein	join(726188..726244,726346..727185)	Theileria orientalis strain Shintoku	20713257
TOT_010000332	CDS	TOT_010000332	NC_025260.1	727261	729988	D	DNA repair protein Rad4 family protein; uncharacterized protein	join(727261..727266,727288..727416,727456..727566,727604..727690,727725..727868,728054..728221,728276..728622,728656..728935,728959..729153,729218..729313,729374..729569,729807..729988)	Theileria orientalis strain Shintoku	20713258
TOT_010000333	CDS	TOT_010000333	NC_025260.1	732838	735802	R	ribosomal protein L13	complement(join(732838..733042,733127..733185,733271..733335,733395..733563,733650..733782,733865..733921,733999..734075,734182..734301,734342..734390,734429..734536,734568..734661,734702..734806,734920..735135,735167..735241,735269..735401,735434..735514,735544..735636,735677..735802))	Theileria orientalis strain Shintoku	20713259
TOT_010000334	CDS	TOT_010000334	NC_025260.1	736028	737341	R	conserved hypothetical protein	complement(join(736028..736087,736119..736348,736431..736560,736591..736688,736720..736778,736820..737009,737041..737181,737212..737341))	Theileria orientalis strain Shintoku	20713260
TOT_010000335	CDS	TOT_010000335	NC_025260.1	737921	741030	R	protein transport protein sec24-like	complement(join(737921..739650,739815..741030))	Theileria orientalis strain Shintoku	20713261
TOT_010000336	CDS	TOT_010000336	NC_025260.1	741503	743371	D	ATP-dependent RNA helicase	join(741503..741674,741711..741803,741833..741892,741923..742047,742079..742196,742228..742398,742429..742506,742596..742794,742827..742904,742935..743072,743104..743371)	Theileria orientalis strain Shintoku	20713262
TOT_010000337	CDS	TOT_010000337	NC_025260.1	743795	745057	D	conserved hypothetical protein	join(743795..743857,743900..744016,744051..744221,744252..744330,744372..744488,744610..744793,744856..745057)	Theileria orientalis strain Shintoku	20713263
TOT_010000338	CDS	TOT_010000338	NC_025260.1	745179	745556	R	small nuclear ribonucleoprotein f	complement(join(745179..745218,745250..745355,745399..745489,745539..745556))	Theileria orientalis strain Shintoku	20713264
TOT_010000339	CDS	TOT_010000339	NC_025260.1	745797	746952	D	tRNA (guanine-n-(7))-methyltransferase	join(745797..745889,745931..746045,746079..746114,746150..746328,746359..746427,746460..746705,746848..746952)	Theileria orientalis strain Shintoku	20713265
TOT_010000340	CDS	TOT_010000340	NC_025260.1	747326	751029	D	conserved hypothetical protein	join(747326..748574,748683..748970,749001..750509,750935..751029)	Theileria orientalis strain Shintoku	20713266
TOT_010000341	CDS	TOT_010000341	NC_025260.1	751113	751955	D	conserved hypothetical protein	751113..751955	Theileria orientalis strain Shintoku	20713267
TOT_010000342	CDS	TOT_010000342	NC_025260.1	752422	752949	D	deoxyuridine 5'-triphosphate nucleotidohydrolase	join(752422..752686,752716..752852,752887..752949)	Theileria orientalis strain Shintoku	20713268
TOT_010000343	CDS	TOT_010000343	NC_025260.1	753420	755814	R	conserved hypothetical protein	complement(join(753420..753512,753720..754645,754860..755814))	Theileria orientalis strain Shintoku	20713269
TOT_010000344	CDS	TOT_010000344	NC_025260.1	756395	757828	R	peptidase S54, rhomboid family protein; uncharacterized protein	complement(join(756395..757002,757102..757828))	Theileria orientalis strain Shintoku	20713270
TOT_010000345	CDS	TOT_010000345	NC_025260.1	758215	759527	D	conserved hypothetical protein	join(758215..758998,759028..759096,759306..759378,759455..759527)	Theileria orientalis strain Shintoku	20713271
TOT_010000346	CDS	TOT_010000346	NC_025260.1	759720	766666	R	DNA polymerase I	complement(join(759720..760522,760777..761469,761704..761979,762073..762309,762370..762630,762811..764016,764360..765736,765886..766234,766289..766666))	Theileria orientalis strain Shintoku	20713272
TOT_010000347	CDS	TOT_010000347	NC_025260.1	767486	770499	D	MIF4G-like, type 3 domain containing protein; uncharacterized protein	join(767486..767543,767586..768135,768313..768406,768448..768618,768739..768997,769091..769177,769281..769359,769410..769685,769941..770067,770200..770289,770374..770499)	Theileria orientalis strain Shintoku	20713273
TOT_010000348	CDS	TOT_010000348	NC_025260.1	770862	773114	R	ATP synthase subunit beta	complement(join(770862..771516,771808..771944,771987..773114))	Theileria orientalis strain Shintoku	20713274
TOT_010000349	CDS	TOT_010000349	NC_025260.1	773321	775203	R	serine hydroxymethyltransferase	complement(join(773321..773436,773541..773895,773937..774237,774435..774892,774922..775203))	Theileria orientalis strain Shintoku	20713275
TOT_010000350	CDS	TOT_010000350	NC_025260.1	775455	778393	R	transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal domain containing protein; uncharacterized protein	complement(join(775455..778034,778068..778252,778276..778393))	Theileria orientalis strain Shintoku	20713276
TOT_010001247	CDS	TOT_010001247	NC_025260.1	778850	779653	R	conserved hypothetical protein	complement(join(778850..779403,779446..779653))	Theileria orientalis strain Shintoku	20714046
TOT_010001248	CDS	TOT_010001248	NC_025260.1	780263	780655	D	ribosomal protein L35 family protein; uncharacterized protein	780263..780655	Theileria orientalis strain Shintoku	20714047
TOT_010000353	CDS	TOT_010000353	NC_025260.1	780805	784152	R	coatomer complex subunit beta	complement(join(780805..780984,781053..781163,781310..781419,781590..782772,782915..783003,783081..784152))	Theileria orientalis strain Shintoku	20713277
TOT_010000354	CDS	TOT_010000354	NC_025260.1	784401	785243	R	Snf7 family protein; uncharacterized protein	complement(join(784401..784592,784668..784778,784908..785114,785181..785243))	Theileria orientalis strain Shintoku	20713278
TOT_010000355	CDS	TOT_010000355	NC_025260.1	785355	788813	D	possible ribonuclease ii family protein; uncharacterized protein	785355..788813	Theileria orientalis strain Shintoku	20713279
TOT_010000356	CDS	TOT_010000356	NC_025260.1	789070	792162	D	aminopeptidase N	join(789070..791265,791314..792162)	Theileria orientalis strain Shintoku	20713280
TOT_010000357	CDS	TOT_010000357	NC_025260.1	792383	792577	R	hypothetical protein	complement(792383..792577)	Theileria orientalis strain Shintoku	20713281
TOT_010000358	CDS	TOT_010000358	NC_025260.1	792821	793770	R	exosome complex exonuclease rrp41	complement(join(792821..792985,793042..793112,793148..793490,793585..793770))	Theileria orientalis strain Shintoku	20713282
TOT_010000359	CDS	TOT_010000359	NC_025260.1	794190	795067	R	acidic leucine-rich nuclear phosphoprotein 32 family protein; uncharacterized protein	complement(join(794190..794314,794348..794537,794696..795067))	Theileria orientalis strain Shintoku	20713283
TOT_010000360	CDS	TOT_010000360	NC_025260.1	795612	796658	R	conserved hypothetical protein	complement(join(795612..795938,795995..796182,796239..796277,796325..796432,796473..796566,796602..796658))	Theileria orientalis strain Shintoku	20713284
TOT_010000361	CDS	TOT_010000361	NC_025260.1	796906	798471	R	conserved hypothetical protein	complement(join(796906..797631,797674..798471))	Theileria orientalis strain Shintoku	20713285
TOT_010000362	CDS	TOT_010000362	NC_025260.1	798680	799075	D	conserved hypothetical protein	join(798680..798781,798914..799075)	Theileria orientalis strain Shintoku	20713286
TOT_010000363	CDS	TOT_010000363	NC_025260.1	799361	801434	D	transporter	join(799361..800072,800183..801146,801263..801434)	Theileria orientalis strain Shintoku	20713287
TOT_010000364	CDS	TOT_010000364	NC_025260.1	801595	802886	D	conserved hypothetical protein	join(801595..802716,802833..802886)	Theileria orientalis strain Shintoku	20713288
TOT_010000365	CDS	TOT_010000365	NC_025260.1	802893	805044	R	asparagine synthase domain containing protein; uncharacterized protein	complement(join(802893..803331,803458..803584,803770..803858,803891..805044))	Theileria orientalis strain Shintoku	20713289
TOT_010000366	CDS	TOT_010000366	NC_025260.1	805358	805513	R	hypothetical protein	complement(805358..805513)	Theileria orientalis strain Shintoku	20713290
TOT_010000367	CDS	TOT_010000367	NC_025260.1	805609	813067	D	HEAT repeat containing protein	join(805609..808551,808708..809048,809243..809834,810279..810905,811158..812528,812689..812756,812788..813067)	Theileria orientalis strain Shintoku	20713291
TOT_010000368	CDS	TOT_010000368	NC_025260.1	813941	817750	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	813941..817750	Theileria orientalis strain Shintoku	20713292
TOT_010000369	CDS	TOT_010000369	NC_025260.1	818225	819435	R	conserved hypothetical protein	complement(join(818225..818809,818974..819435))	Theileria orientalis strain Shintoku	20713293
TOT_010000370	CDS	TOT_010000370	NC_025260.1	819716	820168	D	conserved hypothetical protein	join(819716..819883,819944..820168)	Theileria orientalis strain Shintoku	20713294
TOT_010000371	CDS	TOT_010000371	NC_025260.1	820486	821730	D	conserved hypothetical protein	join(820486..820560,820888..820953,821045..821110,821168..821455,821557..821625,821662..821730)	Theileria orientalis strain Shintoku	20713295
TOT_010000372	CDS	TOT_010000372	NC_025260.1	822099	822760	R	ribosomal protein l6	complement(join(822099..822619,822715..822760))	Theileria orientalis strain Shintoku	20713296
TOT_010000373	CDS	TOT_010000373	NC_025260.1	823126	824248	R	ribosomal protein S15, mitochondrial precursor	complement(join(823126..823262,823365..823457,823493..823559,823597..823646,823681..823851,823882..824248))	Theileria orientalis strain Shintoku	20713297
TOT_010000374	CDS	TOT_010000374	NC_025260.1	824425	828036	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(824425..825384,825417..825467,825501..826005,826104..826238,826276..826403,826464..826553,826600..826691,826854..827118,827151..827252,827284..827340,827518..828036)	Theileria orientalis strain Shintoku	20713298
TOT_010000375	CDS	TOT_010000375	NC_025260.1	828189	828484	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(828189..828293,828323..828484)	Theileria orientalis strain Shintoku	20713299
TOT_010000376	CDS	TOT_010000376	NC_025260.1	828608	830806	R	conserved hypothetical protein	complement(join(828608..829703,829866..830806))	Theileria orientalis strain Shintoku	20713300
TOT_010001249	CDS	TOT_010001249	NC_025260.1	831093	831524	R	microsomal signal peptidase subunit family protein; uncharacterized protein	complement(join(831093..831209,831244..831390,831477..831524))	Theileria orientalis strain Shintoku	20714048
TOT_010000378	CDS	TOT_010000378	NC_025260.1	831698	834937	R	conserved hypothetical protein	complement(join(831698..832968,833326..834937))	Theileria orientalis strain Shintoku	20713301
TOT_010000379	CDS	TOT_010000379	NC_025260.1	835605	839790	D	serine-threonine protein kinase	join(835605..838130,838315..839790)	Theileria orientalis strain Shintoku	20713302
TOT_010001250	CDS	TOT_010001250	NC_025260.1	840071	840746	D	peptide chain release factor 1, mitochondrial precursor	join(840071..840213,840362..840440,840474..840644,840678..840746)	Theileria orientalis strain Shintoku	20714049
TOT_010001251	CDS	TOT_010001251	NC_025260.1	841235	842520	D	TATA-box binding family protein; uncharacterized protein	join(841235..841637,841669..842195,842236..842520)	Theileria orientalis strain Shintoku	20714050
TOT_010000382	CDS	TOT_010000382	NC_025260.1	842757	843380	D	protein of unknown function DUF1782 family protein; uncharacterized protein	join(842757..842950,842981..843044,843118..843285,843318..843380)	Theileria orientalis strain Shintoku	20713303
TOT_010000383	CDS	TOT_010000383	NC_025260.1	843568	845492	R	conserved hypothetical protein	complement(join(843568..844956,845217..845492))	Theileria orientalis strain Shintoku	20713304
TOT_010000384	CDS	TOT_010000384	NC_025260.1	845507	845974	R	conserved hypothetical protein	complement(845507..845974)	Theileria orientalis strain Shintoku	20713305
TOT_010000385	CDS	TOT_010000385	NC_025260.1	846386	849841	R	conserved hypothetical protein	complement(846386..849841)	Theileria orientalis strain Shintoku	20713306
TOT_010000386	CDS	TOT_010000386	NC_025260.1	849841	851689	R	conserved hypothetical protein	complement(join(849841..849962,850303..851689))	Theileria orientalis strain Shintoku	20713307
TOT_010000387	CDS	TOT_010000387	NC_025260.1	853773	856965	D	conserved hypothetical protein	join(853773..854271,854310..854887,855002..855231,855369..856965)	Theileria orientalis strain Shintoku	20713308
TOT_010000388	CDS	TOT_010000388	NC_025260.1	857015	858671	R	conserved hypothetical protein	complement(join(857015..857072,857095..858671))	Theileria orientalis strain Shintoku	20713309
TOT_010000389	CDS	TOT_010000389	NC_025260.1	858835	859692	R	leucine-rich repeat, typical subtype containing protein	complement(join(858835..858935,858997..859139,859179..859294,859328..859417,859451..859575,859614..859692))	Theileria orientalis strain Shintoku	20713310
TOT_010000390	CDS	TOT_010000390	NC_025260.1	859896	879670	R	predicted protein	complement(join(859896..860858,860889..867349,867380..868084,868099..868318,868349..868707,868737..868802,868834..868917,868948..869163,869194..869535,869565..869885,869916..870206,870238..870375,870405..870605,870690..870901,871028..874526,874559..875125,875245..879670))	Theileria orientalis strain Shintoku	20713311
TOT_010000391	CDS	TOT_010000391	NC_025260.1	880083	881341	D	conserved hypothetical protein	join(880083..880126,880157..880233,880265..880879,880910..880983,881015..881341)	Theileria orientalis strain Shintoku	20713312
TOT_010000392	CDS	TOT_010000392	NC_025260.1	881505	883079	D	dihydrofolate synthase/folylpolyglutamate synthase	join(881505..881700,881731..881882,881917..882052,882084..882297,882328..882556,882606..882823,882857..883079)	Theileria orientalis strain Shintoku	20713313
TOT_010001185	CDS	TOT_010001185	NC_025260.1	883221	891585	R	HEAT repeat containing protein	complement(join(883221..884375,884522..885351,885490..887478,887661..890764,890795..890968,891001..891116,891146..891402,891486..891585))	Theileria orientalis strain Shintoku	20713986
TOT_010000393	CDS	TOT_010000393	NC_025260.1	891695	892251	R	ribosomal protein L29 family protein; uncharacterized protein	complement(join(891695..891898,891940..892251))	Theileria orientalis strain Shintoku	20713314
TOT_010001252	CDS	TOT_010001252	NC_025260.1	892469	893134	D	0; Conserved hypothetical protein	892469..893134	Theileria orientalis strain Shintoku	20714051
TOT_010000394	CDS	TOT_010000394	NC_025260.1	893225	896544	D	tRNA delta (2)-isopentenylpyrophosphate transferase	join(893225..893277,893319..893395,893438..893517,893733..893816,893851..893913,893952..894032,894062..894331,894365..894403,894438..894557,894609..894748,894808..894944,895050..895408,895453..895590,895625..895733,895765..895975,896010..896094,896125..896167,896276..896544)	Theileria orientalis strain Shintoku	20713315
TOT_010000395	CDS	TOT_010000395	NC_025260.1	896610	897282	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(896610..896833,896866..897151,897196..897282))	Theileria orientalis strain Shintoku	20713316
TOT_010000396	CDS	TOT_010000396	NC_025260.1	897451	899378	D	conserved hypothetical protein	join(897451..898839,898872..899378)	Theileria orientalis strain Shintoku	20713317
TOT_010000397	CDS	TOT_010000397	NC_025260.1	899956	900036	R	conserved hypothetical protein	complement(899956..900036)	Theileria orientalis strain Shintoku	20713318
TOT_010000398	CDS	TOT_010000398	NC_025260.1	905089	905947	D	hypothetical protein	join(905089..905147,905213..905269,905519..905675,905681..905947)	Theileria orientalis strain Shintoku	20713319
TOT_010000399	CDS	TOT_010000399	NC_025260.1	906146	906926	D	hypothetical protein	join(906146..906205,906483..906671,906804..906926)	Theileria orientalis strain Shintoku	20713320
TOT_010000400	CDS	TOT_010000400	NC_025260.1	909823	910123	D	hypothetical protein	join(909823..909878,909949..910123)	Theileria orientalis strain Shintoku	20713321
TOT_010000401	CDS	TOT_010000401	NC_025260.1	911611	914577	R	DNA mismatch repair protein Msh2	complement(join(911611..911754,911784..911929,911959..912061,912090..912204,912403..912518,912549..913672,913896..914135,914158..914302,914323..914577))	Theileria orientalis strain Shintoku	20713322
TOT_010000402	CDS	TOT_010000402	NC_025260.1	914714	919093	R	conserved hypothetical protein	complement(join(914714..914786,914881..915196,915369..918345,918376..918565,918625..918914,918944..918991,919022..919093))	Theileria orientalis strain Shintoku	20713323
TOT_010000403	CDS	TOT_010000403	NC_025260.1	919638	920400	D	SJCHGC08976 protein; uncharacterized protein	join(919638..919901,919932..919983,920201..920299,920330..920400)	Theileria orientalis strain Shintoku	20713324
TOT_010000404	CDS	TOT_010000404	NC_025260.1	920687	922873	R	glycyl-tRNA synthetase	complement(920687..922873)	Theileria orientalis strain Shintoku	20713325
TOT_010000405	CDS	TOT_010000405	NC_025260.1	923105	924000	D	cytokine induced apoptosis inhibitor 1	join(923105..923479,923564..923944,923992..924000)	Theileria orientalis strain Shintoku	20713326
TOT_010000406	CDS	TOT_010000406	NC_025260.1	924308	926200	R	histone acetyltransferase gcn5-related	complement(924308..926200)	Theileria orientalis strain Shintoku	20713327
TOT_010000407	CDS	TOT_010000407	NC_025260.1	926245	926457	D	hypothetical protein	926245..926457	Theileria orientalis strain Shintoku	20713328
TOT_010000408	CDS	TOT_010000408	NC_025260.1	926753	935932	R	Dopey, N-terminal domain containing protein; uncharacterized protein	complement(926753..935932)	Theileria orientalis strain Shintoku	20713329
TOT_010000409	CDS	TOT_010000409	NC_025260.1	936441	937766	R	conserved hypothetical protein	complement(join(936441..937107,937165..937766))	Theileria orientalis strain Shintoku	20713330
TOT_010001253	CDS	TOT_010001253	NC_025260.1	938798	940899	D	conserved hypothetical protein	join(938798..939464,939507..939598,939691..939758,939808..939942,940065..940155,940276..940466,940497..940742,940773..940899)	Theileria orientalis strain Shintoku	20714052
TOT_010001254	CDS	TOT_010001254	NC_025260.1	941172	941527	D	conserved hypothetical protein	join(941172..941321,941362..941457,941495..941527)	Theileria orientalis strain Shintoku	20714053
TOT_010001255	CDS	TOT_010001255	NC_025260.1	942177	943841	D	rhomboid family; integral membrane protein	join(942177..942804,942963..943127,943378..943841)	Theileria orientalis strain Shintoku	20714054
TOT_010000413	CDS	TOT_010000413	NC_025260.1	943983	944851	D	thioredoxin domain containing protein; uncharacterized protein	join(943983..944222,944260..944454,944488..944610,944642..944851)	Theileria orientalis strain Shintoku	20713331
TOT_010000414	CDS	TOT_010000414	NC_025260.1	945217	946189	R	conserved hypothetical protein	complement(join(945217..945501,945531..945632,945663..945765,945801..946011,946114..946189))	Theileria orientalis strain Shintoku	20713332
TOT_010000415	CDS	TOT_010000415	NC_025260.1	946329	949041	R	conserved hypothetical protein	complement(join(946329..946485,946517..946883,946968..949041))	Theileria orientalis strain Shintoku	20713333
TOT_010001256	CDS	TOT_010001256	NC_025260.1	949442	950289	D	conserved thioredoxin-like protein	join(949442..949700,949752..949777,949809..949899,950148..950221,950251..950289)	Theileria orientalis strain Shintoku	20714055
TOT_010001257	CDS	TOT_010001257	NC_025260.1	950595	951956	R	aspartate transcarbamoylase	complement(join(950595..950732,950816..951004,951147..951956))	Theileria orientalis strain Shintoku	20714056
TOT_010001258	CDS	TOT_010001258	NC_025260.1	952619	952777	D	hypothetical protein	952619..952777	Theileria orientalis strain Shintoku	20714057
TOT_010000419	CDS	TOT_010000419	NC_025260.1	953130	953898	R	hypothetical protein	complement(join(953130..953299,953326..953730,953736..953898))	Theileria orientalis strain Shintoku	20713334
TOT_010000420	CDS	TOT_010000420	NC_025260.1	954061	956844	D	zinc finger, RING-type domain containing protein; uncharacterized protein	954061..956844	Theileria orientalis strain Shintoku	20713335
TOT_010000421	CDS	TOT_010000421	NC_025260.1	956872	960724	R	HSP70 chaperone	complement(join(956872..957046,957126..957240,957448..958667,958803..958988,959166..960724))	Theileria orientalis strain Shintoku	20713336
TOT_010000422	CDS	TOT_010000422	NC_025260.1	961221	964178	R	conserved hypothetical protein	complement(join(961221..961565,961782..964178))	Theileria orientalis strain Shintoku	20713337
TOT_010000423	CDS	TOT_010000423	NC_025260.1	964932	967184	R	glycine cleavage T protein family protein; uncharacterized protein	complement(join(964932..965453,965485..965573,965693..966030,966061..967184))	Theileria orientalis strain Shintoku	20713338
TOT_010000424	CDS	TOT_010000424	NC_025260.1	967552	970536	D	conserved hypothetical protein	967552..970536	Theileria orientalis strain Shintoku	20713339
TOT_010000425	CDS	TOT_010000425	NC_025260.1	970799	972385	R	U4/U6 small nuclear ribonucleoprotein	complement(970799..972385)	Theileria orientalis strain Shintoku	20713340
TOT_010001259	CDS	TOT_010001259	NC_025260.1	976199	993316	D	concanavalin A-like lectin/glucanase domain containing protein; uncharacterized protein	join(976199..976232,976319..979749,980113..980905,981122..981932,982089..983621,983715..984103,984322..986170,986444..988531,989105..991058,991231..991403,991434..991552,991707..992361,992413..992987,993033..993316)	Theileria orientalis strain Shintoku	20714058
TOT_010000427	CDS	TOT_010000427	NC_025260.1	993395	996091	D	potassium channel, voltage dependent, Kv, tetramerisation domain containing protein; uncharacterized protein	join(993395..993844,994052..994488,994720..995588,996036..996091)	Theileria orientalis strain Shintoku	20713341
TOT_010000428	CDS	TOT_010000428	NC_025260.1	996183	997717	D	UDP-N-acetylglucosamine pyrophosphorylase	join(996183..997331,997481..997717)	Theileria orientalis strain Shintoku	20713342
TOT_010001260	CDS	TOT_010001260	NC_025260.1	998042	999833	R	conserved hypothetical protein	complement(join(998042..998592,998734..999702,999740..999833))	Theileria orientalis strain Shintoku	20714059
TOT_010000430	CDS	TOT_010000430	NC_025260.1	1000375	1002516	D	conserved hypothetical protein	1000375..1002516	Theileria orientalis strain Shintoku	20713343
TOT_010000431	CDS	TOT_010000431	NC_025260.1	1003019	1005334	R	phosphoenolpyruvate carboxykinase	complement(join(1003019..1004775,1004957..1005077,1005116..1005334))	Theileria orientalis strain Shintoku	20713344
TOT_010000432	CDS	TOT_010000432	NC_025260.1	1005994	1009564	D	exosome complex exonuclease rrp44	join(1005994..1006558,1006649..1007987,1008162..1008311,1008407..1009022,1009190..1009291,1009322..1009564)	Theileria orientalis strain Shintoku	20713345
TOT_010000433	CDS	TOT_010000433	NC_025260.1	1009739	1011570	R	ribonucleoprotein	complement(join(1009739..1010137,1010155..1011570))	Theileria orientalis strain Shintoku	20713346
TOT_010001261	CDS	TOT_010001261	NC_025260.1	1014061	1016303	D	endonuclease/exonuclease/phosphatase domain containing protein; uncharacterized protein	join(1014061..1014941,1015383..1015998,1016247..1016303)	Theileria orientalis strain Shintoku	20714060
TOT_010000435	CDS	TOT_010000435	NC_025260.1	1016509	1016895	R	conserved hypothetical protein	complement(1016509..1016895)	Theileria orientalis strain Shintoku	20713347
TOT_010000436	CDS	TOT_010000436	NC_025260.1	1017038	1018777	R	conserved hypothetical protein	complement(join(1017038..1017144,1017249..1017320,1017402..1017502,1017547..1017593,1017712..1017846,1018262..1018325,1018417..1018529,1018620..1018675,1018708..1018777))	Theileria orientalis strain Shintoku	20713348
TOT_010000437	CDS	TOT_010000437	NC_025260.1	1018880	1021054	R	hypothetical protein	complement(1018880..1021054)	Theileria orientalis strain Shintoku	20713349
TOT_010000438	CDS	TOT_010000438	NC_025260.1	1021098	1022507	R	conserved hypothetical protein	complement(join(1021098..1021226,1021278..1021387,1021627..1022133,1022231..1022507))	Theileria orientalis strain Shintoku	20713350
TOT_010000439	CDS	TOT_010000439	NC_025260.1	1022557	1023081	R	hypothetical protein	complement(join(1022557..1022719,1022812..1022858,1023025..1023081))	Theileria orientalis strain Shintoku	20713351
TOT_010000440	CDS	TOT_010000440	NC_025260.1	1023546	1026299	D	myosin a	join(1023546..1023644,1023757..1023897,1024038..1026299)	Theileria orientalis strain Shintoku	20713352
TOT_010000441	CDS	TOT_010000441	NC_025260.1	1026864	1029164	R	predicted protein	complement(1026864..1029164)	Theileria orientalis strain Shintoku	20713353
TOT_010000442	CDS	TOT_010000442	NC_025260.1	1029702	1031467	R	conserved hypothetical protein	complement(join(1029702..1030995,1031400..1031467))	Theileria orientalis strain Shintoku	20713354
TOT_010000443	CDS	TOT_010000443	NC_025260.1	1031551	1032969	R	conserved hypothetical protein	complement(1031551..1032969)	Theileria orientalis strain Shintoku	20713355
TOT_010000444	CDS	TOT_010000444	NC_025260.1	1033528	1035633	R	conserved hypothetical protein	complement(1033528..1035633)	Theileria orientalis strain Shintoku	20713356
TOT_010000445	CDS	TOT_010000445	NC_025260.1	1036403	1038510	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1036403..1036408,1036753..1036862,1037381..1037832,1037879..1038510)	Theileria orientalis strain Shintoku	20713357
TOT_010001262	CDS	TOT_010001262	NC_025260.1	1039177	1039841	D	histone-fold domain containing protein; uncharacterized protein	join(1039177..1039284,1039317..1039404,1039492..1039841)	Theileria orientalis strain Shintoku	20714061
TOT_010000447	CDS	TOT_010000447	NC_025260.1	1040054	1040612	D	ribosomal protein S15	join(1040054..1040288,1040392..1040612)	Theileria orientalis strain Shintoku	20713358
TOT_010000448	CDS	TOT_010000448	NC_025260.1	1040765	1042550	R	riboflavin kinase domain containing protein; uncharacterized protein	complement(join(1040765..1041070,1041194..1041320,1041379..1041447,1041540..1041624,1041690..1041824,1041869..1042550))	Theileria orientalis strain Shintoku	20713359
TOT_010000449	CDS	TOT_010000449	NC_025260.1	1043297	1050012	D	heat shock protein Hsp70 family protein; uncharacterized protein	join(1043297..1043406,1043925..1044334,1044362..1045360,1046017..1046140,1046258..1046315,1046440..1046743,1046842..1047110,1047245..1047343,1047417..1047551,1047625..1048749,1048900..1048973,1049142..1049268,1049476..1050012)	Theileria orientalis strain Shintoku	20713360
TOT_010000450	CDS	TOT_010000450	NC_025260.1	1050155	1051123	R	ribosomal protein S12	complement(1050155..1051123)	Theileria orientalis strain Shintoku	20713361
TOT_010000451	CDS	TOT_010000451	NC_025260.1	1051353	1052313	D	GOLD domain containing protein; uncharacterized protein	join(1051353..1051509,1051549..1051629,1051811..1051977,1052065..1052313)	Theileria orientalis strain Shintoku	20713362
TOT_010000452	CDS	TOT_010000452	NC_025260.1	1052791	1056712	R	DNA replication licensing factor Mcm2	complement(join(1052791..1053051,1053589..1054006,1054046..1054848,1054885..1055801,1056031..1056712))	Theileria orientalis strain Shintoku	20713363
TOT_010000453	CDS	TOT_010000453	NC_025260.1	1057125	1057699	D	ubiquitin carrier protein	join(1057125..1057176,1057293..1057699)	Theileria orientalis strain Shintoku	20713364
TOT_010000454	CDS	TOT_010000454	NC_025260.1	1058280	1060795	R	conserved hypothetical protein	complement(join(1058280..1058660,1058859..1058946,1059098..1059324,1059532..1059897,1060014..1060126,1060168..1060708,1060748..1060795))	Theileria orientalis strain Shintoku	20713365
TOT_010000455	CDS	TOT_010000455	NC_025260.1	1061332	1062448	D	conserved hypothetical protein	join(1061332..1061373,1061404..1061478,1061508..1061654,1061726..1061939,1062087..1062141,1062286..1062448)	Theileria orientalis strain Shintoku	20713366
TOT_010001263	CDS	TOT_010001263	NC_025260.1	1064397	1073225	D	zinc finger, PHD-type domain containing protein; uncharacterized protein	join(1064397..1064777,1065591..1066372,1066814..1067669,1068102..1068279,1068574..1068937,1069757..1070275,1070552..1070978,1071966..1072770,1072912..1073225)	Theileria orientalis strain Shintoku	20714062
TOT_010000457	CDS	TOT_010000457	NC_025260.1	1074276	1075760	D	conserved hypothetical protein	1074276..1075760	Theileria orientalis strain Shintoku	20713367
TOT_010000458	CDS	TOT_010000458	NC_025260.1	1078087	1079574	D	conserved hypothetical protein	1078087..1079574	Theileria orientalis strain Shintoku	20713368
TOT_010000459	CDS	TOT_010000459	NC_025260.1	1080006	1080176	R	hypothetical protein	complement(join(1080006..1080043,1080089..1080176))	Theileria orientalis strain Shintoku	20713369
TOT_010000460	CDS	TOT_010000460	NC_025260.1	1081389	1082072	D	hypothetical protein	join(1081389..1081473,1081993..1082072)	Theileria orientalis strain Shintoku	20713370
TOT_010000461	CDS	TOT_010000461	NC_025260.1	1082140	1083009	D	conserved hypothetical protein	1082140..1083009	Theileria orientalis strain Shintoku	20713371
TOT_010000462	CDS	TOT_010000462	NC_025260.1	1083067	1083624	D	conserved hypothetical protein	1083067..1083624	Theileria orientalis strain Shintoku	20713372
TOT_010000463	CDS	TOT_010000463	NC_025260.1	1084253	1087462	R	synaptojanin, N-terminal domain containing protein; uncharacterized protein	complement(1084253..1087462)	Theileria orientalis strain Shintoku	20713373
TOT_010000464	CDS	TOT_010000464	NC_025260.1	1088010	1088189	R	hypothetical protein	complement(1088010..1088189)	Theileria orientalis strain Shintoku	20713374
TOT_010000465	CDS	TOT_010000465	NC_025260.1	1088531	1093111	R	ABC transporter	complement(1088531..1093111)	Theileria orientalis strain Shintoku	20713375
TOT_010000466	CDS	TOT_010000466	NC_025260.1	1094193	1094914	R	transcription factor	complement(join(1094193..1094272,1094343..1094490,1094585..1094678,1094733..1094820,1094902..1094914))	Theileria orientalis strain Shintoku	20713376
TOT_010000467	CDS	TOT_010000467	NC_025260.1	1095083	1097056	D	conserved hypothetical protein	join(1095083..1096468,1096753..1096862,1096981..1097056)	Theileria orientalis strain Shintoku	20713377
TOT_010000468	CDS	TOT_010000468	NC_025260.1	1097592	1098518	R	prefoldin domain containing protein; uncharacterized protein	complement(1097592..1098518)	Theileria orientalis strain Shintoku	20713378
TOT_010001264	CDS	TOT_010001264	NC_025260.1	1098813	1102301	R	phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein; uncharacterized protein	complement(join(1098813..1099327,1099763..1100406,1100518..1100758,1100813..1101912,1101988..1102301))	Theileria orientalis strain Shintoku	20714063
TOT_010000470	CDS	TOT_010000470	NC_025260.1	1102600	1103475	D	conserved hypothetical protein	join(1102600..1102681,1102725..1102856,1102958..1103067,1103329..1103475)	Theileria orientalis strain Shintoku	20713379
TOT_010000471	CDS	TOT_010000471	NC_025260.1	1104457	1107074	D	Os04g0561700 protein; uncharacterized protein	join(1104457..1105405,1105543..1105601,1105800..1106561,1106581..1106775,1106812..1106923,1106932..1107074)	Theileria orientalis strain Shintoku	20713380
TOT_010000472	CDS	TOT_010000472	NC_025260.1	1107115	1108262	D	protein of unknown function UPF0005 family protein; uncharacterized protein	join(1107115..1107199,1107391..1107488,1107606..1107924,1107994..1108262)	Theileria orientalis strain Shintoku	20713381
TOT_010000473	CDS	TOT_010000473	NC_025260.1	1108867	1110223	D	conserved transmembrane protein	join(1108867..1108924,1109125..1109225,1109429..1109747,1109943..1110223)	Theileria orientalis strain Shintoku	20713382
TOT_010000474	CDS	TOT_010000474	NC_025260.1	1110614	1111851	D	conserved hypothetical protein	join(1110614..1110893,1111057..1111473,1111547..1111851)	Theileria orientalis strain Shintoku	20713383
TOT_010000475	CDS	TOT_010000475	NC_025260.1	1112108	1113323	D	protein of unknown function UPF0005 family protein; uncharacterized protein	join(1112108..1112279,1112437..1112856,1113052..1113323)	Theileria orientalis strain Shintoku	20713384
TOT_010000476	CDS	TOT_010000476	NC_025260.1	1113577	1117777	R	conserved hypothetical protein	complement(join(1113577..1117613,1117741..1117777))	Theileria orientalis strain Shintoku	20713385
TOT_010000477	CDS	TOT_010000477	NC_025260.1	1118401	1119587	D	conserved hypothetical protein	join(1118401..1118767,1118844..1118951,1119103..1119587)	Theileria orientalis strain Shintoku	20713386
TOT_010000478	CDS	TOT_010000478	NC_025260.1	1120005	1121044	R	mRNA splicing factor, Cwf21 family protein; uncharacterized protein	complement(join(1120005..1120572,1120731..1121044))	Theileria orientalis strain Shintoku	20713387
TOT_010000479	CDS	TOT_010000479	NC_025260.1	1121256	1121582	D	hypothetical protein	join(1121256..1121315,1121463..1121582)	Theileria orientalis strain Shintoku	20713388
TOT_010000480	CDS	TOT_010000480	NC_025260.1	1122140	1125107	D	elongation factor 2	join(1122140..1124260,1124790..1125107)	Theileria orientalis strain Shintoku	20713389
TOT_010000481	CDS	TOT_010000481	NC_025260.1	1125497	1126498	D	conserved hypothetical protein	join(1125497..1125620,1125738..1125836,1125908..1126085,1126330..1126498)	Theileria orientalis strain Shintoku	20713390
TOT_010000482	CDS	TOT_010000482	NC_025260.1	1126685	1133498	D	silent information regulator protein Sir2	join(1126685..1126847,1127228..1128586,1128805..1129403,1129494..1129718,1130067..1130909,1132671..1133042,1133178..1133210,1133310..1133498)	Theileria orientalis strain Shintoku	20713391
TOT_010000483	CDS	TOT_010000483	NC_025260.1	1133936	1134707	R	vesicle transport v-SNARE family protein; uncharacterized protein	complement(join(1133936..1134211,1134324..1134707))	Theileria orientalis strain Shintoku	20713392
TOT_010001265	CDS	TOT_010001265	NC_025260.1	1135219	1136164	D	SprA protein	join(1135219..1135797,1136051..1136164)	Theileria orientalis strain Shintoku	20714064
TOT_010000485	CDS	TOT_010000485	NC_025260.1	1136758	1140090	R	conserved hypothetical protein	complement(1136758..1140090)	Theileria orientalis strain Shintoku	20713393
TOT_010001266	CDS	TOT_010001266	NC_025260.1	1141292	1142670	R	CS domain containing protein; uncharacterized protein	complement(join(1141292..1141477,1141622..1141782,1141878..1142011,1142099..1142670))	Theileria orientalis strain Shintoku	20714065
TOT_010001267	CDS	TOT_010001267	NC_025260.1	1142944	1143387	R	CS domain containing protein; uncharacterized protein	complement(1142944..1143387)	Theileria orientalis strain Shintoku	20714066
TOT_010000488	CDS	TOT_010000488	NC_025260.1	1144018	1150119	D	long-chain-fatty-acid--CoA ligase 5	join(1144018..1144063,1144095..1144179,1144340..1144683,1144757..1145074,1145299..1145768,1145927..1146078,1146122..1146208,1146350..1146437,1146721..1146810,1146843..1146971,1147124..1147250,1147588..1147789,1148204..1148768,1149049..1149334,1149419..1150119)	Theileria orientalis strain Shintoku	20713394
TOT_010000489	CDS	TOT_010000489	NC_025260.1	1150280	1151181	R	conserved hypothetical protein	complement(join(1150280..1150942,1151164..1151181))	Theileria orientalis strain Shintoku	20713395
TOT_010000490	CDS	TOT_010000490	NC_025260.1	1152051	1153052	D	conserved hypothetical protein	join(1152051..1152165,1152293..1152459,1152681..1153052)	Theileria orientalis strain Shintoku	20713396
TOT_010000491	CDS	TOT_010000491	NC_025260.1	1153589	1154696	D	conserved hypothetical protein	join(1153589..1153634,1153733..1153814,1153874..1153923,1154185..1154256,1154305..1154696)	Theileria orientalis strain Shintoku	20713397
TOT_010000492	CDS	TOT_010000492	NC_025260.1	1154993	1158736	R	conserved hypothetical protein	complement(1154993..1158736)	Theileria orientalis strain Shintoku	20713398
TOT_010000493	CDS	TOT_010000493	NC_025260.1	1160064	1162142	D	conserved hypothetical protein	join(1160064..1161293,1161317..1162112,1162135..1162142)	Theileria orientalis strain Shintoku	20713399
TOT_010000494	CDS	TOT_010000494	NC_025260.1	1162263	1165730	R	tryptophanyl-tRNA synthetase	complement(join(1162263..1162596,1162656..1162726,1162842..1163044,1163183..1163284,1163423..1163528,1163767..1164173,1164397..1164551,1164689..1164948,1164999..1165122,1165298..1165407,1165448..1165537,1165611..1165730))	Theileria orientalis strain Shintoku	20713400
TOT_010000495	CDS	TOT_010000495	NC_025260.1	1166038	1166883	D	zinc finger, C2HC5-type domain containing protein; uncharacterized protein	join(1166038..1166185,1166266..1166448,1166571..1166747,1166816..1166883)	Theileria orientalis strain Shintoku	20713401
TOT_010000496	CDS	TOT_010000496	NC_025260.1	1166949	1169909	R	1-deoxy-D-xylulose-5-phosphate synthase	complement(join(1166949..1166971,1167007..1167112,1167210..1169909))	Theileria orientalis strain Shintoku	20713402
TOT_010001186	CDS	TOT_010001186	NC_025260.1	1170173	1173435	D	peptidase M3A and M3B, thimet/oligopeptidase F domain containing protein; uncharacterized protein	join(1170173..1170600,1170669..1170762,1170806..1170922,1170991..1171088,1171118..1171205,1171240..1171331,1171370..1171430,1171616..1171838,1171985..1172251,1172288..1172482,1172656..1172780,1172847..1173085,1173160..1173244,1173349..1173435)	Theileria orientalis strain Shintoku	20713987
TOT_010001187	CDS	TOT_010001187	NC_025260.1	1173610	1175866	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(1173610..1173737,1173882..1174305,1174482..1174829,1175006..1175257,1175457..1175579,1175687..1175866)	Theileria orientalis strain Shintoku	20713988
TOT_010001268	CDS	TOT_010001268	NC_025260.1	1176141	1177048	D	myosin a tail domain interacting protein mtip	join(1176141..1176344,1176588..1176833,1176887..1177048)	Theileria orientalis strain Shintoku	20714067
TOT_010000498	CDS	TOT_010000498	NC_025260.1	1177160	1177865	D	conserved hypothetical protein	join(1177160..1177253,1177318..1177444,1177616..1177865)	Theileria orientalis strain Shintoku	20713403
TOT_010000499	CDS	TOT_010000499	NC_025260.1	1178077	1178391	D	hypothetical protein	join(1178077..1178129,1178301..1178391)	Theileria orientalis strain Shintoku	20713404
TOT_010000500	CDS	TOT_010000500	NC_025260.1	1178532	1181789	D	conserved hypothetical protein	join(1178532..1180484,1180620..1180701,1180737..1181256,1181600..1181789)	Theileria orientalis strain Shintoku	20713405
TOT_010000501	CDS	TOT_010000501	NC_025260.1	1182332	1183936	R	conserved hypothetical protein	complement(1182332..1183936)	Theileria orientalis strain Shintoku	20713406
TOT_010000502	CDS	TOT_010000502	NC_025260.1	1184271	1185167	R	hypothetical protein	complement(join(1184271..1184400,1185052..1185167))	Theileria orientalis strain Shintoku	20713407
TOT_010000503	CDS	TOT_010000503	NC_025260.1	1185233	1191398	R	ATP-dependent helicase	complement(join(1185233..1185330,1185355..1185497,1185642..1185892,1186080..1186310,1186505..1186634,1186870..1187104,1187251..1187310,1187506..1187715,1187774..1188011,1188498..1188554,1188677..1189713,1190186..1190581,1190699..1190750,1190807..1190934,1190988..1191138,1191312..1191398))	Theileria orientalis strain Shintoku	20713408
TOT_010000504	CDS	TOT_010000504	NC_025260.1	1191709	1193451	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1191709..1191845,1191915..1192120,1192292..1193059,1193147..1193451)	Theileria orientalis strain Shintoku	20713409
TOT_010000505	CDS	TOT_010000505	NC_025260.1	1194372	1195762	D	choline kinase	join(1194372..1195507,1195657..1195762)	Theileria orientalis strain Shintoku	20713410
TOT_010000506	CDS	TOT_010000506	NC_025260.1	1196083	1197210	D	choline kinase	1196083..1197210	Theileria orientalis strain Shintoku	20713411
TOT_010001269	CDS	TOT_010001269	NC_025260.1	1198660	1200402	D	conserved hypothetical protein	join(1198660..1199516,1199700..1200402)	Theileria orientalis strain Shintoku	20714068
TOT_010000508	CDS	TOT_010000508	NC_025260.1	1200697	1202151	R	transcription elongation factor	complement(join(1200697..1201277,1201566..1201860,1202068..1202151))	Theileria orientalis strain Shintoku	20713412
TOT_010000509	CDS	TOT_010000509	NC_025260.1	1202452	1204399	D	conserved hypothetical protein	join(1202452..1202669,1202805..1202979,1203170..1204399)	Theileria orientalis strain Shintoku	20713413
TOT_010000510	CDS	TOT_010000510	NC_025260.1	1204598	1205492	D	hypothetical protein	join(1204598..1204627,1205133..1205492)	Theileria orientalis strain Shintoku	20713414
TOT_010000511	CDS	TOT_010000511	NC_025260.1	1205686	1206578	R	SJCHGC04905 protein; uncharacterized protein	complement(join(1205686..1205952,1206076..1206240,1206347..1206409,1206531..1206578))	Theileria orientalis strain Shintoku	20713415
TOT_010000512	CDS	TOT_010000512	NC_025260.1	1206680	1210908	D	conserved hypothetical protein	join(1206680..1206875,1207042..1207344,1207418..1208702,1209147..1209547,1209749..1210403,1210710..1210908)	Theileria orientalis strain Shintoku	20713416
TOT_010000513	CDS	TOT_010000513	NC_025260.1	1211060	1211176	R	hypothetical protein	complement(1211060..1211176)	Theileria orientalis strain Shintoku	20713417
TOT_010000514	CDS	TOT_010000514	NC_025260.1	1211362	1212483	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1211362..1212483	Theileria orientalis strain Shintoku	20713418
TOT_010000515	CDS	TOT_010000515	NC_025260.1	1212493	1212606	R	hypothetical protein	complement(1212493..1212606)	Theileria orientalis strain Shintoku	20713419
TOT_010000516	CDS	TOT_010000516	NC_025260.1	1213113	1217460	D	protein of unknown function GLTT domain containing protein; uncharacterized protein	join(1213113..1215325,1215525..1216846,1216964..1217373,1217437..1217460)	Theileria orientalis strain Shintoku	20713420
TOT_010000517	CDS	TOT_010000517	NC_025260.1	1217832	1220048	R	epsin, N-terminal domain containing protein; uncharacterized protein	complement(join(1217832..1219089,1219210..1220048))	Theileria orientalis strain Shintoku	20713421
TOT_010000518	CDS	TOT_010000518	NC_025260.1	1221353	1222504	R	conserved hypothetical protein	complement(join(1221353..1222321,1222469..1222504))	Theileria orientalis strain Shintoku	20713422
TOT_010000519	CDS	TOT_010000519	NC_025260.1	1223066	1224616	D	component of cytosolic 80S ribosome and 60S large subunit; ribosomal protein L3	join(1223066..1223737,1224029..1224616)	Theileria orientalis strain Shintoku	20713423
TOT_010000520	CDS	TOT_010000520	NC_025260.1	1225196	1226329	R	hypothetical protein	complement(1225196..1226329)	Theileria orientalis strain Shintoku	20713424
TOT_010000521	CDS	TOT_010000521	NC_025260.1	1227062	1228489	R	conserved hypothetical protein	complement(1227062..1228489)	Theileria orientalis strain Shintoku	20713425
TOT_010000522	CDS	TOT_010000522	NC_025260.1	1229271	1230196	R	conserved hypothetical protein	complement(join(1229271..1229471,1229492..1230111,1230193..1230196))	Theileria orientalis strain Shintoku	20713426
TOT_010000523	CDS	TOT_010000523	NC_025260.1	1230654	1234111	D	tRNA-binding arm domain containing protein; uncharacterized protein	join(1230654..1230761,1231084..1233943,1234026..1234111)	Theileria orientalis strain Shintoku	20713427
TOT_010000524	CDS	TOT_010000524	NC_025260.1	1234650	1235297	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	join(1234650..1235057,1235121..1235297)	Theileria orientalis strain Shintoku	20713428
TOT_010001270	CDS	TOT_010001270	NC_025260.1	1236352	1238142	R	Machado-Joseph disease protein MJD family protein; uncharacterized protein	complement(join(1236352..1236462,1236564..1236906,1237091..1237162,1237218..1237300,1237395..1237465,1237857..1237932,1238026..1238142))	Theileria orientalis strain Shintoku	20714069
TOT_010000526	CDS	TOT_010000526	NC_025260.1	1240151	1241694	D	eukaryotic rRNA processing family protein; uncharacterized protein	join(1240151..1240208,1240340..1240652,1240754..1240802,1240994..1241126,1241270..1241694)	Theileria orientalis strain Shintoku	20713429
TOT_010000527	CDS	TOT_010000527	NC_025260.1	1242119	1243264	D	hypothetical protein	join(1242119..1242874,1243025..1243264)	Theileria orientalis strain Shintoku	20713430
TOT_010000528	CDS	TOT_010000528	NC_025260.1	1243397	1244892	R	methyltransferase type 11 domain containing protein; uncharacterized protein	complement(join(1243397..1243574,1243911..1243994,1244068..1244133,1244468..1244892))	Theileria orientalis strain Shintoku	20713431
TOT_010000529	CDS	TOT_010000529	NC_025260.1	1245160	1245642	D	hypothetical protein	join(1245160..1245275,1245283..1245480,1245597..1245642)	Theileria orientalis strain Shintoku	20713432
TOT_010000530	CDS	TOT_010000530	NC_025260.1	1245769	1246924	R	DHHC-containing protein 20	complement(join(1245769..1245996,1246082..1246189,1246221..1246252,1246329..1246465,1246471..1246542,1246611..1246705,1246805..1246924))	Theileria orientalis strain Shintoku	20713433
TOT_010000531	CDS	TOT_010000531	NC_025260.1	1247250	1248487	R	zinc finger, CCHC-type domain containing protein; uncharacterized protein	complement(join(1247250..1247360,1247392..1247511,1247634..1247815,1247913..1248086,1248181..1248487))	Theileria orientalis strain Shintoku	20713434
TOT_010000532	CDS	TOT_010000532	NC_025260.1	1249842	1252301	R	conserved hypothetical protein	complement(1249842..1252301)	Theileria orientalis strain Shintoku	20713435
TOT_010000533	CDS	TOT_010000533	NC_025260.1	1253720	1254176	D	conserved hypothetical protein	join(1253720..1253977,1254072..1254176)	Theileria orientalis strain Shintoku	20713436
TOT_010000534	CDS	TOT_010000534	NC_025260.1	1254408	1261393	R	conserved hypothetical protein	complement(join(1254408..1254544,1254741..1254989,1255091..1255131,1255755..1260954,1261330..1261393))	Theileria orientalis strain Shintoku	20713437
TOT_010001271	CDS	TOT_010001271	NC_025260.1	1261968	1273831	R	RNA recognition motif domain containing protein; uncharacterized protein	complement(join(1261968..1262079,1262362..1266462,1267208..1267265,1268426..1268514,1268976..1269484,1269734..1270362,1270636..1271108,1271325..1271951,1272105..1272388,1272524..1273344,1273440..1273552,1273687..1273765,1273798..1273831))	Theileria orientalis strain Shintoku	20714070
TOT_010000535	CDS	TOT_010000535	NC_025260.1	1267917	1268528	D	hypothetical protein	join(1267917..1267978,1268173..1268238,1268420..1268528)	Theileria orientalis strain Shintoku	20713438
TOT_010000536	CDS	TOT_010000536	NC_025260.1	1274303	1276218	D	secretory protein	join(1274303..1274418,1274471..1274596,1274627..1274701,1274747..1274900,1274947..1275027,1275135..1275295,1275360..1275488,1275620..1275847,1275955..1276050,1276068..1276218)	Theileria orientalis strain Shintoku	20713439
TOT_010001272	CDS	TOT_010001272	NC_025260.1	1276459	1277545	D	proteasome subunit alpha type 5-2	join(1276459..1276541,1276577..1276935,1277006..1277215,1277376..1277545)	Theileria orientalis strain Shintoku	20714071
TOT_010000538	CDS	TOT_010000538	NC_025260.1	1277634	1280613	D	conserved hypothetical protein	join(1277634..1277698,1277999..1278667,1278917..1279604,1279670..1280103,1280122..1280172,1280292..1280613)	Theileria orientalis strain Shintoku	20713440
TOT_010000539	CDS	TOT_010000539	NC_025260.1	1280740	1282980	R	conserved hypothetical protein	complement(join(1280740..1280920,1280960..1281822,1281880..1282980))	Theileria orientalis strain Shintoku	20713441
TOT_010000540	CDS	TOT_010000540	NC_025260.1	1283712	1285209	D	conserved hypothetical protein	join(1283712..1285082,1285110..1285154,1285183..1285209)	Theileria orientalis strain Shintoku	20713442
TOT_010000541	CDS	TOT_010000541	NC_025260.1	1285319	1285737	R	ribosomal protein L33 family protein; uncharacterized protein	complement(join(1285319..1285538,1285571..1285737))	Theileria orientalis strain Shintoku	20713443
TOT_010000542	CDS	TOT_010000542	NC_025260.1	1285947	1290381	D	Sad1/UNC-like, C-terminal domain containing protein; uncharacterized protein	join(1285947..1286398,1286554..1288879,1289021..1289616,1290156..1290381)	Theileria orientalis strain Shintoku	20713444
TOT_010000543	CDS	TOT_010000543	NC_025260.1	1290535	1299951	R	cell surface antigen domain containing protein; uncharacterized protein	complement(join(1290535..1291566,1291591..1294625,1294653..1295252,1295271..1298234,1298250..1299951))	Theileria orientalis strain Shintoku	20713445
TOT_010000544	CDS	TOT_010000544	NC_025260.1	1301223	1302059	R	conserved hypothetical protein	complement(1301223..1302059)	Theileria orientalis strain Shintoku	20713446
TOT_010000545	CDS	TOT_010000545	NC_025260.1	1302844	1303308	R	ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein; uncharacterized protein	complement(join(1302844..1303009,1303039..1303161,1303193..1303243,1303268..1303308))	Theileria orientalis strain Shintoku	20713447
TOT_010000546	CDS	TOT_010000546	NC_025260.1	1304512	1306637	D	conserved hypothetical protein	join(1304512..1304583,1304692..1304769,1304853..1304982,1305104..1305229,1305268..1306637)	Theileria orientalis strain Shintoku	20713448
TOT_010000547	CDS	TOT_010000547	NC_025260.1	1306678	1312178	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1306678..1306824,1307278..1308587,1309461..1312026,1312059..1312178))	Theileria orientalis strain Shintoku	20713449
TOT_010000548	CDS	TOT_010000548	NC_025260.1	1312846	1313216	D	hypothetical protein	join(1312846..1312889,1313006..1313216)	Theileria orientalis strain Shintoku	20713450
TOT_010000549	CDS	TOT_010000549	NC_025260.1	1314560	1315387	R	conserved hypothetical protein	complement(1314560..1315387)	Theileria orientalis strain Shintoku	20713451
TOT_010001273	CDS	TOT_010001273	NC_025260.1	1317412	1318821	R	hexose transporter	complement(1317412..1318821)	Theileria orientalis strain Shintoku	20714072
TOT_010000551	CDS	TOT_010000551	NC_025260.1	1320480	1322192	R	protein kinase, core domain containing protein; uncharacterized protein	complement(1320480..1322192)	Theileria orientalis strain Shintoku	20713452
TOT_010000552	CDS	TOT_010000552	NC_025260.1	1322913	1323803	D	conserved hypothetical protein	join(1322913..1323130,1323162..1323248,1323522..1323592,1323624..1323748,1323780..1323803)	Theileria orientalis strain Shintoku	20713453
TOT_010000553	CDS	TOT_010000553	NC_025260.1	1323984	1325278	R	nuclear transcription factor Y subunit C-2	complement(join(1323984..1324045,1324102..1324260,1324369..1324660,1324739..1324840,1324900..1325013,1325101..1325183,1325218..1325278))	Theileria orientalis strain Shintoku	20713454
TOT_010000554	CDS	TOT_010000554	NC_025260.1	1326651	1335473	D	DEAD-box helicase	join(1326651..1326959,1327087..1327234,1327503..1327902,1327934..1328092,1328425..1328702,1329127..1329821,1329876..1330123,1330184..1331066,1331475..1331685,1331949..1332404,1332694..1332818,1333094..1333159,1333233..1333506,1333800..1334356,1334616..1334645,1334679..1334832,1335169..1335328,1335359..1335473)	Theileria orientalis strain Shintoku	20713455
TOT_010000555	CDS	TOT_010000555	NC_025260.1	1335848	1340191	D	conserved hypothetical protein	1335848..1340191	Theileria orientalis strain Shintoku	20713456
TOT_010000556	CDS	TOT_010000556	NC_025260.1	1341172	1341770	D	hypothetical protein	join(1341172..1341269,1341372..1341525,1341561..1341689,1341714..1341770)	Theileria orientalis strain Shintoku	20713457
TOT_010000557	CDS	TOT_010000557	NC_025260.1	1341917	1342746	D	hypothetical protein	join(1341917..1342016,1342033..1342157,1342230..1342344,1342445..1342746)	Theileria orientalis strain Shintoku	20713458
TOT_010000558	CDS	TOT_010000558	NC_025260.1	1344933	1345472	D	conserved hypothetical protein	1344933..1345472	Theileria orientalis strain Shintoku	20713459
TOT_010000559	CDS	TOT_010000559	NC_025260.1	1345962	1347353	R	splicing factor	complement(1345962..1347353)	Theileria orientalis strain Shintoku	20713460
TOT_010001274	CDS	TOT_010001274	NC_025260.1	1347728	1347925	R	trimeric LpxA-like domain containing protein; uncharacterized protein	complement(join(1347728..1347811,1347842..1347925))	Theileria orientalis strain Shintoku	20714073
TOT_010001275	CDS	TOT_010001275	NC_025260.1	1348071	1349430	R	nucleotidyl transferase domain containing protein; uncharacterized protein	complement(join(1348071..1348172,1348197..1348420,1348558..1348857,1348921..1349226,1349262..1349430))	Theileria orientalis strain Shintoku	20714074
TOT_010000562	CDS	TOT_010000562	NC_025260.1	1349838	1350102	R	hypothetical protein	complement(join(1349838..1349995,1350027..1350102))	Theileria orientalis strain Shintoku	20713461
TOT_010000563	CDS	TOT_010000563	NC_025260.1	1350281	1353726	D	conserved hypothetical protein	join(1350281..1350394,1350518..1350737,1350952..1351154,1351368..1352097,1352224..1352678,1352885..1353348,1353378..1353726)	Theileria orientalis strain Shintoku	20713462
TOT_010000564	CDS	TOT_010000564	NC_025260.1	1355762	1360183	D	trehalose-6-phosphate synthase	join(1355762..1356396,1356547..1356556,1356719..1357347,1357471..1357744,1357969..1358571,1358819..1359231,1359616..1360183)	Theileria orientalis strain Shintoku	20713463
TOT_010000565	CDS	TOT_010000565	NC_025260.1	1361267	1361698	D	conserved hypothetical protein	join(1361267..1361335,1361420..1361527,1361630..1361698)	Theileria orientalis strain Shintoku	20713464
TOT_010000566	CDS	TOT_010000566	NC_025260.1	1362508	1363170	R	nucleic acid-binding, OB-fold domain containing protein; uncharacterized protein	complement(join(1362508..1362642,1362838..1363170))	Theileria orientalis strain Shintoku	20713465
TOT_010000567	CDS	TOT_010000567	NC_025260.1	1363902	1366574	D	zinc finger, C2H2-type domain containing protein; uncharacterized protein	join(1363902..1363936,1364034..1364088,1364193..1364291,1364373..1364474,1364593..1364784,1364882..1365160,1365442..1366281,1366512..1366574)	Theileria orientalis strain Shintoku	20713466
TOT_010000568	CDS	TOT_010000568	NC_025260.1	1367170	1371306	D	COG4 transport domain containing protein; uncharacterized protein	join(1367170..1367682,1367905..1368087,1368256..1369356,1369431..1369441,1369527..1369878,1370044..1370242,1370362..1370555,1370819..1370935,1371036..1371164,1371205..1371306)	Theileria orientalis strain Shintoku	20713467
TOT_010000569	CDS	TOT_010000569	NC_025260.1	1371694	1374916	R	NEDD8-activating enzyme E1 catalytic subunit	complement(join(1371694..1371784,1371819..1371889,1372131..1372989,1373150..1373596,1374035..1374107,1374295..1374491,1374530..1374685,1374864..1374916))	Theileria orientalis strain Shintoku	20713468
TOT_010000570	CDS	TOT_010000570	NC_025260.1	1376108	1376496	R	hypothetical protein	complement(join(1376108..1376392,1376422..1376496))	Theileria orientalis strain Shintoku	20713469
TOT_010000571	CDS	TOT_010000571	NC_025260.1	1376529	1379966	D	conserved hypothetical protein	join(1376529..1377072,1377172..1379966)	Theileria orientalis strain Shintoku	20713470
TOT_010000572	CDS	TOT_010000572	NC_025260.1	1381338	1384247	D	hypothetical protein	join(1381338..1383903,1383982..1384146,1384210..1384247)	Theileria orientalis strain Shintoku	20713471
TOT_010000573	CDS	TOT_010000573	NC_025260.1	1384359	1386038	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1384359..1384509,1384539..1385193,1385352..1385494,1385568..1385814,1385927..1386038))	Theileria orientalis strain Shintoku	20713472
TOT_010000574	CDS	TOT_010000574	NC_025260.1	1386163	1386501	R	conserved hypothetical protein	complement(1386163..1386501)	Theileria orientalis strain Shintoku	20713473
TOT_010001276	CDS	TOT_010001276	NC_025260.1	1388355	1389531	D	conserved hypothetical protein	join(1388355..1388812,1388987..1389074,1389152..1389217,1389409..1389531)	Theileria orientalis strain Shintoku	20714075
TOT_010000576	CDS	TOT_010000576	NC_025260.1	1389734	1397944	R	MIF4G-like, type 3 domain containing protein; uncharacterized protein	complement(join(1389734..1390031,1390336..1391197,1391240..1391389,1391501..1391811,1392187..1393045,1393181..1393444,1393865..1397883,1397904..1397944))	Theileria orientalis strain Shintoku	20713474
TOT_010000577	CDS	TOT_010000577	NC_025260.1	1398614	1399924	R	transcription initiation factor	complement(join(1398614..1398768,1399034..1399237,1399273..1399467,1399648..1399924))	Theileria orientalis strain Shintoku	20713475
TOT_010000578	CDS	TOT_010000578	NC_025260.1	1400318	1403074	D	conserved hypothetical protein	join(1400318..1402432,1402697..1403074)	Theileria orientalis strain Shintoku	20713476
TOT_010000579	CDS	TOT_010000579	NC_025260.1	1403743	1406343	R	conserved hypothetical protein	complement(1403743..1406343)	Theileria orientalis strain Shintoku	20713477
TOT_010000580	CDS	TOT_010000580	NC_025260.1	1407395	1407715	R	hypothetical protein	complement(1407395..1407715)	Theileria orientalis strain Shintoku	20713478
TOT_010000581	CDS	TOT_010000581	NC_025260.1	1408116	1409735	D	SJCHGC04867 protein; uncharacterized protein	join(1408116..1408289,1408470..1408823,1409046..1409292,1409431..1409573,1409676..1409735)	Theileria orientalis strain Shintoku	20713479
TOT_010000582	CDS	TOT_010000582	NC_025260.1	1409804	1411115	R	adenylate kinase	complement(join(1409804..1409836,1409886..1410218,1410341..1410481,1410784..1410888,1410996..1411115))	Theileria orientalis strain Shintoku	20713480
TOT_010000583	CDS	TOT_010000583	NC_025260.1	1411606	1412856	D	diphthine synthase	join(1411606..1411746,1411778..1411902,1412031..1412132,1412332..1412511,1412577..1412635,1412669..1412856)	Theileria orientalis strain Shintoku	20713481
TOT_010000584	CDS	TOT_010000584	NC_025260.1	1413017	1415352	R	N6 adenine-specific DNA methyltransferase, N12 class family protein; uncharacterized protein	complement(join(1413017..1413116,1413439..1413601,1413660..1413723,1413835..1413917,1414127..1414212,1414266..1414345,1414403..1414576,1414720..1414953,1415038..1415352))	Theileria orientalis strain Shintoku	20713482
TOT_010001188	CDS	TOT_010001188	NC_025260.1	1415442	1415862	D	protein of unknown function DUF1764, eukaryotic family protein; uncharacterized protein	join(1415442..1415745,1415810..1415862)	Theileria orientalis strain Shintoku	20713989
TOT_010000585	CDS	TOT_010000585	NC_025260.1	1416514	1417299	D	elongation factor	join(1416514..1416607,1416658..1416722,1416786..1416855,1416898..1417035,1417133..1417214,1417290..1417299)	Theileria orientalis strain Shintoku	20713483
TOT_010000586	CDS	TOT_010000586	NC_025260.1	1417421	1418951	D	Rab5 GTPase	join(1417421..1417626,1417680..1417787,1417960..1417998,1418063..1418175,1418612..1418688,1418856..1418951)	Theileria orientalis strain Shintoku	20713484
TOT_010000587	CDS	TOT_010000587	NC_025260.1	1419275	1423096	R	DEAD-box family helicase	complement(join(1419275..1420116,1420430..1420627,1420691..1420908,1421101..1421280,1421499..1422183,1422277..1423096))	Theileria orientalis strain Shintoku	20713485
TOT_010001277	CDS	TOT_010001277	NC_025260.1	1423424	1424284	D	Dim1 protein	join(1423424..1423465,1423500..1423535,1423647..1423748,1423832..1423908,1424014..1424132,1424232..1424284)	Theileria orientalis strain Shintoku	20714076
TOT_010000589	CDS	TOT_010000589	NC_025260.1	1424583	1425350	D	conserved hypothetical protein	1424583..1425350	Theileria orientalis strain Shintoku	20713486
TOT_010000590	CDS	TOT_010000590	NC_025260.1	1426674	1427575	D	hypothetical protein	join(1426674..1426971,1427200..1427370,1427400..1427575)	Theileria orientalis strain Shintoku	20713487
TOT_010000591	CDS	TOT_010000591	NC_025260.1	1427868	1430902	R	conserved hypothetical protein	complement(join(1427868..1428342,1428462..1428523,1428660..1428762,1428939..1429144,1429336..1429477,1429630..1429687,1429764..1429914,1430023..1430088,1430153..1430224,1430293..1430490,1430532..1430651,1430708..1430902))	Theileria orientalis strain Shintoku	20713488
TOT_010000592	CDS	TOT_010000592	NC_025260.1	1431382	1433899	R	conserved hypothetical protein	complement(join(1431382..1433281,1433351..1433528,1433635..1433899))	Theileria orientalis strain Shintoku	20713489
TOT_010000593	CDS	TOT_010000593	NC_025260.1	1435055	1436733	D	protein of unknown function DUF284, transmembrane eukaryotic family protein; uncharacterized protein	join(1435055..1435358,1435418..1435789,1435857..1436178,1436289..1436733)	Theileria orientalis strain Shintoku	20713490
TOT_010000594	CDS	TOT_010000594	NC_025260.1	1437599	1441363	D	apical membrane antigen 1 family protein; uncharacterized protein	join(1437599..1438220,1438368..1439570,1439786..1440258,1440638..1441363)	Theileria orientalis strain Shintoku	20713491
TOT_010000595	CDS	TOT_010000595	NC_025260.1	1441738	1442235	D	conserved hypothetical protein	1441738..1442235	Theileria orientalis strain Shintoku	20713492
TOT_010000596	CDS	TOT_010000596	NC_025260.1	1442490	1443799	D	conserved hypothetical protein	join(1442490..1442626,1442713..1443018,1443312..1443444,1443515..1443799)	Theileria orientalis strain Shintoku	20713493
TOT_010000597	CDS	TOT_010000597	NC_025260.1	1443989	1445593	R	hypothetical protein	complement(join(1443989..1444057,1444089..1444158,1444206..1444264,1444568..1444662,1444760..1445023,1445116..1445593))	Theileria orientalis strain Shintoku	20713494
TOT_010000598	CDS	TOT_010000598	NC_025260.1	1445894	1446530	D	conserved hypothetical protein	join(1445894..1446306,1446392..1446530)	Theileria orientalis strain Shintoku	20713495
TOT_010000599	CDS	TOT_010000599	NC_025260.1	1446939	1448381	D	DNA-directed RNA polymerase III	join(1446939..1447056,1447246..1447388,1447469..1447601,1447784..1447929,1448027..1448122,1448235..1448381)	Theileria orientalis strain Shintoku	20713496
TOT_010000600	CDS	TOT_010000600	NC_025260.1	1448725	1449399	D	hypothetical protein	1448725..1449399	Theileria orientalis strain Shintoku	20713497
TOT_010000601	CDS	TOT_010000601	NC_025260.1	1449790	1450336	D	40S ribosomal protein S25	join(1449790..1449864,1450091..1450336)	Theileria orientalis strain Shintoku	20713498
TOT_010000602	CDS	TOT_010000602	NC_025260.1	1451849	1452565	R	ribosomal protein L1 family protein; uncharacterized protein	complement(1451849..1452565)	Theileria orientalis strain Shintoku	20713499
TOT_010000603	CDS	TOT_010000603	NC_025260.1	1452794	1457407	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(1452794..1452931,1453064..1453156,1453211..1453381,1453476..1453625,1453696..1453774,1453866..1453939,1454078..1454149,1454250..1454323,1454721..1455032,1455067..1457407)	Theileria orientalis strain Shintoku	20713500
TOT_010000604	CDS	TOT_010000604	NC_025260.1	1458065	1459362	D	conserved hypothetical protein	join(1458065..1458662,1458800..1459362)	Theileria orientalis strain Shintoku	20713501
TOT_010000605	CDS	TOT_010000605	NC_025260.1	1459460	1463389	D	conserved hypothetical protein	join(1459460..1460762,1460805..1460936,1461132..1461304,1461503..1462190,1462275..1462530,1462738..1463389)	Theileria orientalis strain Shintoku	20713502
TOT_010000606	CDS	TOT_010000606	NC_025260.1	1463596	1464387	R	hypothetical protein	complement(1463596..1464387)	Theileria orientalis strain Shintoku	20713503
TOT_010000607	CDS	TOT_010000607	NC_025260.1	1464707	1465807	D	short-chain dehydrogenase/reductase SDR family protein; uncharacterized protein	join(1464707..1465081,1465155..1465542,1465575..1465807)	Theileria orientalis strain Shintoku	20713504
TOT_010000608	CDS	TOT_010000608	NC_025260.1	1465818	1466240	R	hypothetical protein	complement(join(1465818..1465950,1465959..1466072,1466077..1466240))	Theileria orientalis strain Shintoku	20713505
TOT_010000609	CDS	TOT_010000609	NC_025260.1	1466590	1469952	D	conserved hypothetical protein	1466590..1469952	Theileria orientalis strain Shintoku	20713506
TOT_010000610	CDS	TOT_010000610	NC_025260.1	1471478	1471609	R	ABC transporter	complement(1471478..1471609)	Theileria orientalis strain Shintoku	20713507
TOT_010000611	CDS	TOT_010000611	NC_025260.1	1471746	1475681	D	ABC transporter related domain containing protein; uncharacterized protein	1471746..1475681	Theileria orientalis strain Shintoku	20713508
TOT_010000612	CDS	TOT_010000612	NC_025260.1	1476439	1480992	D	ABC transporter	join(1476439..1476491,1476630..1480992)	Theileria orientalis strain Shintoku	20713509
TOT_010000613	CDS	TOT_010000613	NC_025260.1	1481601	1482204	D	conserved hypothetical protein	join(1481601..1482124,1482174..1482204)	Theileria orientalis strain Shintoku	20713510
TOT_010000614	CDS	TOT_010000614	NC_025260.1	1482424	1483599	R	glycerophosphoryl diester phosphodiesterase	complement(1482424..1483599)	Theileria orientalis strain Shintoku	20713511
TOT_010000615	CDS	TOT_010000615	NC_025260.1	1484319	1485842	D	adaptor protein	1484319..1485842	Theileria orientalis strain Shintoku	20713512
TOT_010001278	CDS	TOT_010001278	NC_025260.1	1486349	1488820	D	conserved hypothetical protein	join(1486349..1486400,1486463..1488027,1488272..1488354,1488454..1488820)	Theileria orientalis strain Shintoku	20714077
TOT_010000617	CDS	TOT_010000617	NC_025260.1	1489274	1495786	R	conserved hypothetical protein	complement(join(1489274..1491589,1492262..1493622,1493746..1493900,1494237..1494721,1495091..1495786))	Theileria orientalis strain Shintoku	20713513
TOT_010000618	CDS	TOT_010000618	NC_025260.1	1496334	1498277	D	ribosomal protein S18	join(1496334..1496492,1496559..1496872,1496954..1497083,1497162..1497246,1497710..1497897,1497998..1498104,1498163..1498277)	Theileria orientalis strain Shintoku	20713514
TOT_010000619	CDS	TOT_010000619	NC_025260.1	1499160	1500994	D	3'5'-cyclic nucleotide phosphodiesterase domain containing protein; uncharacterized protein	join(1499160..1499472,1499501..1499832,1500045..1500159,1500303..1500994)	Theileria orientalis strain Shintoku	20713515
TOT_010000620	CDS	TOT_010000620	NC_025260.1	1501367	1502599	R	molecular chaperone DnaJ	complement(join(1501367..1501485,1501603..1501743,1501961..1502097,1502181..1502280,1502343..1502444,1502488..1502599))	Theileria orientalis strain Shintoku	20713516
TOT_010000621	CDS	TOT_010000621	NC_025260.1	1502995	1506511	D	minichromosome maintenance protein	join(1502995..1503058,1503138..1503256,1503349..1504073,1504109..1504178,1504242..1504560,1504703..1504849,1504951..1505105,1505190..1505311,1505483..1505554,1505630..1505714,1505796..1505993,1506070..1506279,1506330..1506405,1506456..1506511)	Theileria orientalis strain Shintoku	20713517
TOT_010000622	CDS	TOT_010000622	NC_025260.1	1506973	1514772	D	flavin-containing amine oxidase	join(1506973..1507678,1507733..1507793,1507839..1509162,1509262..1511479,1511963..1512517,1512645..1512735,1512958..1514026,1514078..1514428,1514641..1514772)	Theileria orientalis strain Shintoku	20713518
TOT_010000623	CDS	TOT_010000623	NC_025260.1	1515254	1518338	D	DNA replication licensing factor	join(1515254..1515631,1515715..1516125,1516158..1516404,1516509..1516614,1516737..1516942,1517089..1517389,1517468..1517558,1517787..1518338)	Theileria orientalis strain Shintoku	20713519
TOT_010000624	CDS	TOT_010000624	NC_025260.1	1519478	1519945	D	ubiquitin	1519478..1519945	Theileria orientalis strain Shintoku	20713520
TOT_010001279	CDS	TOT_010001279	NC_025260.1	1520627	1525237	R	cation ATPase	complement(join(1520627..1522049,1522431..1522642,1522778..1522944,1523005..1523748,1523857..1525237))	Theileria orientalis strain Shintoku	20714078
TOT_010000626	CDS	TOT_010000626	NC_025260.1	1526141	1527740	D	conserved hypothetical protein	join(1526141..1526995,1527028..1527386,1527446..1527544,1527617..1527740)	Theileria orientalis strain Shintoku	20713521
TOT_010000627	CDS	TOT_010000627	NC_025260.1	1528181	1530364	D	D111/G-patch domain containing protein; uncharacterized protein	join(1528181..1528981,1529084..1530364)	Theileria orientalis strain Shintoku	20713522
TOT_010000628	CDS	TOT_010000628	NC_025260.1	1530610	1531398	D	30S ribosomal protein S16	join(1530610..1530715,1530857..1531398)	Theileria orientalis strain Shintoku	20713523
TOT_010000629	CDS	TOT_010000629	NC_025260.1	1531697	1533307	R	conserved hypothetical protein	complement(join(1531697..1533069,1533163..1533307))	Theileria orientalis strain Shintoku	20713524
TOT_010000630	CDS	TOT_010000630	NC_025260.1	1533531	1536221	R	conserved hypothetical protein	complement(join(1533531..1533662,1533703..1533920,1533960..1534050,1534088..1534200,1534291..1534507,1534608..1534685,1534775..1534872,1534909..1535026,1535060..1535134,1535217..1535309,1535358..1535442,1535517..1535618,1535730..1535836,1535866..1536039,1536105..1536221))	Theileria orientalis strain Shintoku	20713525
TOT_010000631	CDS	TOT_010000631	NC_025260.1	1536468	1537793	R	clathrin-adaptor chain	complement(1536468..1537793)	Theileria orientalis strain Shintoku	20713526
TOT_010000632	CDS	TOT_010000632	NC_025260.1	1538193	1540112	R	26S proteasome subunit	complement(join(1538193..1538447,1538521..1538824,1538985..1539195,1539321..1539430,1539479..1539531,1539570..1539748,1539813..1539894,1540050..1540112))	Theileria orientalis strain Shintoku	20713527
TOT_010000633	CDS	TOT_010000633	NC_025260.1	1540385	1543351	D	conserved hypothetical protein	join(1540385..1540511,1540547..1540623,1540654..1541659,1541691..1541983,1542140..1542934,1543159..1543288,1543326..1543351)	Theileria orientalis strain Shintoku	20713528
TOT_010001280	CDS	TOT_010001280	NC_025260.1	1543663	1547559	R	26S proteasome regulatory subunit	complement(join(1543663..1544668,1544927..1545207,1545286..1545820,1545932..1546211,1546347..1547559))	Theileria orientalis strain Shintoku	20714079
TOT_010000635	CDS	TOT_010000635	NC_025260.1	1548310	1550847	D	forkhead-associated domain containing protein; uncharacterized protein	join(1548310..1549240,1549415..1549624,1549730..1550475,1550548..1550847)	Theileria orientalis strain Shintoku	20713529
TOT_010000636	CDS	TOT_010000636	NC_025260.1	1551081	1553621	D	Os02g0606100 protein; uncharacterized protein	join(1551081..1551219,1551259..1551329,1551367..1551454,1551484..1551591,1551677..1551777,1551836..1551991,1552124..1552369,1552443..1552559,1552776..1552952,1553060..1553365,1553511..1553621)	Theileria orientalis strain Shintoku	20713530
TOT_010000637	CDS	TOT_010000637	NC_025260.1	1554834	1556758	R	molecular chaperone protein	complement(join(1554834..1555163,1555454..1555735,1555922..1555963,1556072..1556158,1556246..1556342,1556501..1556649,1556690..1556758))	Theileria orientalis strain Shintoku	20713531
TOT_010000638	CDS	TOT_010000638	NC_025260.1	1557424	1558901	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(1557424..1557750,1557938..1557989,1558104..1558342,1558454..1558501,1558534..1558639,1558693..1558901))	Theileria orientalis strain Shintoku	20713532
TOT_010001281	CDS	TOT_010001281	NC_025260.1	1559222	1561624	R	Rhoptry-associated protein 1 family protein; uncharacterized protein	complement(1559222..1561624)	Theileria orientalis strain Shintoku	20714080
TOT_010001282	CDS	TOT_010001282	NC_025260.1	1562909	1564792	R	Rhoptry-associated protein 1 family protein; uncharacterized protein	complement(1562909..1564792)	Theileria orientalis strain Shintoku	20714081
TOT_010000641	CDS	TOT_010000641	NC_025260.1	1565633	1567594	R	conserved hypothetical protein	complement(1565633..1567594)	Theileria orientalis strain Shintoku	20713533
TOT_010000642	CDS	TOT_010000642	NC_025260.1	1568204	1568931	R	conserved hypothetical protein	complement(join(1568204..1568270,1568368..1568417,1568449..1568580,1568686..1568727,1568770..1568931))	Theileria orientalis strain Shintoku	20713534
TOT_010000643	CDS	TOT_010000643	NC_025260.1	1569341	1574919	D	DEAD-box family helicase	join(1569341..1569493,1569526..1569705,1569770..1570063,1570455..1570524,1570558..1570640,1570742..1571131,1571203..1571343,1571412..1571509,1571585..1571755,1571871..1572717,1572813..1572904,1573021..1573418,1573490..1573819,1573964..1574919)	Theileria orientalis strain Shintoku	20713535
TOT_010000644	CDS	TOT_010000644	NC_025260.1	1575515	1576994	D	Os12g0596200 protein; uncharacterized protein	join(1575515..1575999,1576199..1576309,1576538..1576994)	Theileria orientalis strain Shintoku	20713536
TOT_010000645	CDS	TOT_010000645	NC_025260.1	1577317	1578497	D	conserved hypothetical protein	join(1577317..1577787,1577899..1578117,1578369..1578497)	Theileria orientalis strain Shintoku	20713537
TOT_010001283	CDS	TOT_010001283	NC_025260.1	1579001	1580345	D	phosphotyrosyl phosphatase activator protein	join(1579001..1579279,1579377..1579494,1579560..1579659,1579728..1579875,1580003..1580077,1580196..1580345)	Theileria orientalis strain Shintoku	20714082
TOT_010001190	CDS	TOT_010001190	NC_025260.1	1580712	1586429	D	histidine acid phosphatase family protein; uncharacterized protein	join(1580712..1580831,1580946..1581029,1581119..1581217,1581303..1582362,1582447..1584768,1584907..1585854,1585981..1586161,1586243..1586429)	Theileria orientalis strain Shintoku	20713990
TOT_010000647	CDS	TOT_010000647	NC_025260.1	1586670	1587255	R	hypothetical protein	complement(join(1586670..1586758,1586784..1586901,1587217..1587255))	Theileria orientalis strain Shintoku	20713538
TOT_010000648	CDS	TOT_010000648	NC_025260.1	1587273	1588082	D	hypothetical protein	1587273..1588082	Theileria orientalis strain Shintoku	20713539
TOT_010000649	CDS	TOT_010000649	NC_025260.1	1588315	1591715	R	vacuolar protein sorting-associated, VPS28 family protein; uncharacterized protein	complement(join(1588315..1588383,1588468..1588709,1588847..1589087,1589173..1589304,1589395..1590225,1590452..1590502,1590619..1590674,1590854..1591061,1591170..1591250,1591319..1591417,1591485..1591715))	Theileria orientalis strain Shintoku	20713540
TOT_010000650	CDS	TOT_010000650	NC_025260.1	1591923	1593815	D	conserved hypothetical protein	join(1591923..1593010,1593092..1593242,1593308..1593448,1593522..1593580,1593710..1593815)	Theileria orientalis strain Shintoku	20713541
TOT_010000651	CDS	TOT_010000651	NC_025260.1	1593820	1601462	R	coatamer subunit beta	complement(join(1593820..1593888,1594166..1594291,1594371..1594449,1594514..1594614,1594806..1595066,1595233..1596423,1596651..1596770,1597202..1597287,1597451..1597517,1597590..1598117,1598431..1598489,1598613..1598948,1599168..1600172,1600188..1600391,1600431..1600521,1600627..1600746,1600868..1600994,1601032..1601194,1601324..1601462))	Theileria orientalis strain Shintoku	20713542
TOT_010000652	CDS	TOT_010000652	NC_025260.1	1602083	1603019	D	hypothetical protein	join(1602083..1602563,1602907..1603019)	Theileria orientalis strain Shintoku	20713543
TOT_010000653	CDS	TOT_010000653	NC_025260.1	1603069	1603968	R	conserved hypothetical protein	complement(1603069..1603968)	Theileria orientalis strain Shintoku	20713544
TOT_010000654	CDS	TOT_010000654	NC_025260.1	1604936	1605550	R	conserved hypothetical protein	complement(1604936..1605550)	Theileria orientalis strain Shintoku	20713545
TOT_010000655	CDS	TOT_010000655	NC_025260.1	1606451	1610185	R	ribosomal protein L15	complement(join(1606451..1606521,1606648..1606783,1606880..1607047,1607244..1607394,1607468..1607637,1607789..1608002,1608580..1608772,1608839..1609700,1609813..1609922,1609966..1610185))	Theileria orientalis strain Shintoku	20713546
TOT_010001284	CDS	TOT_010001284	NC_025260.1	1610716	1611628	D	Plasmodium falciparum CPW-WPC repeat containing protein	join(1610716..1610843,1610899..1610993,1611059..1611150,1611184..1611222,1611328..1611340,1611369..1611454,1611575..1611628)	Theileria orientalis strain Shintoku	20714083
TOT_010000657	CDS	TOT_010000657	NC_025260.1	1611758	1614310	D	hypothetical protein	join(1611758..1611846,1612287..1612392,1612607..1614310)	Theileria orientalis strain Shintoku	20713547
TOT_010000658	CDS	TOT_010000658	NC_025260.1	1615281	1616900	D	conserved hypothetical protein	1615281..1616900	Theileria orientalis strain Shintoku	20713548
TOT_010000659	CDS	TOT_010000659	NC_025260.1	1617844	1619409	D	conserved hypothetical protein	1617844..1619409	Theileria orientalis strain Shintoku	20713549
TOT_010000660	CDS	TOT_010000660	NC_025260.1	1620380	1622026	D	conserved hypothetical protein	1620380..1622026	Theileria orientalis strain Shintoku	20713550
TOT_010000661	CDS	TOT_010000661	NC_025260.1	1622975	1624582	D	hypothetical protein	1622975..1624582	Theileria orientalis strain Shintoku	20713551
TOT_010000662	CDS	TOT_010000662	NC_025260.1	1625553	1627085	D	hypothetical protein	1625553..1627085	Theileria orientalis strain Shintoku	20713552
TOT_010000663	CDS	TOT_010000663	NC_025260.1	1628034	1629638	D	hypothetical protein	1628034..1629638	Theileria orientalis strain Shintoku	20713553
TOT_010000664	CDS	TOT_010000664	NC_025260.1	1629943	1630443	R	cytochrome c oxidase subunit 2	complement(1629943..1630443)	Theileria orientalis strain Shintoku	20713554
TOT_010000665	CDS	TOT_010000665	NC_025260.1	1630871	1632170	R	50S ribosomal protein L17	complement(join(1630871..1631047,1631193..1631264,1631389..1631491,1631625..1631808,1631871..1631977,1632070..1632170))	Theileria orientalis strain Shintoku	20713555
TOT_010000666	CDS	TOT_010000666	NC_025260.1	1632529	1636469	D	predicted protein	join(1632529..1633287,1633456..1634025,1634152..1634229,1634458..1634908,1635040..1635054,1635105..1635180,1635428..1635923,1636041..1636469)	Theileria orientalis strain Shintoku	20713556
TOT_010000667	CDS	TOT_010000667	NC_025260.1	1636540	1636812	D	conserved hypothetical protein	1636540..1636812	Theileria orientalis strain Shintoku	20713557
TOT_010000668	CDS	TOT_010000668	NC_025260.1	1636838	1639153	R	conserved hypothetical protein	complement(join(1636838..1637867,1637982..1638318,1638487..1638888,1639069..1639153))	Theileria orientalis strain Shintoku	20713558
TOT_010000669	CDS	TOT_010000669	NC_025260.1	1640769	1643476	D	protein kinase	join(1640769..1641162,1641322..1641495,1641601..1643257,1643332..1643476)	Theileria orientalis strain Shintoku	20713559
TOT_010000670	CDS	TOT_010000670	NC_025260.1	1643551	1644867	D	succinyl-Coa ligase, subunit	1643551..1644867	Theileria orientalis strain Shintoku	20713560
TOT_010000671	CDS	TOT_010000671	NC_025260.1	1645032	1646354	R	SF-assemblin family protein; uncharacterized protein	complement(join(1645032..1645082,1645162..1645282,1645491..1645561,1645605..1645739,1645824..1645904,1645936..1646097,1646205..1646354))	Theileria orientalis strain Shintoku	20713561
TOT_010000672	CDS	TOT_010000672	NC_025260.1	1647091	1647658	D	60S ribosomal protein L14	join(1647091..1647162,1647259..1647323,1647412..1647658)	Theileria orientalis strain Shintoku	20713562
TOT_010001285	CDS	TOT_010001285	NC_025260.1	1647901	1649813	R	conserved hypothetical protein	complement(join(1647901..1648857,1648976..1649164,1649335..1649474,1649723..1649813))	Theileria orientalis strain Shintoku	20714084
TOT_010000674	CDS	TOT_010000674	NC_025260.1	1650155	1652081	R	t-SNARE domain containing protein; uncharacterized protein	complement(join(1650155..1650253,1650464..1650516,1650647..1650757,1650910..1650973,1651014..1652081))	Theileria orientalis strain Shintoku	20713563
TOT_010000675	CDS	TOT_010000675	NC_025260.1	1652904	1653202	R	nucleolar protein	complement(join(1652904..1653023,1653149..1653202))	Theileria orientalis strain Shintoku	20713564
TOT_010000676	CDS	TOT_010000676	NC_025260.1	1653407	1654269	D	protein of unknown function DUF602 family protein; uncharacterized protein	join(1653407..1653589,1653663..1653827,1653955..1654269)	Theileria orientalis strain Shintoku	20713565
TOT_010000677	CDS	TOT_010000677	NC_025260.1	1654532	1656598	D	conserved hypothetical protein	join(1654532..1655045,1655140..1655297,1655459..1655547,1655583..1655667,1655704..1655742,1655794..1655850,1656131..1656598)	Theileria orientalis strain Shintoku	20713566
TOT_010000678	CDS	TOT_010000678	NC_025260.1	1656663	1659199	R	conserved hypothetical protein	complement(join(1656663..1656949,1657454..1657600,1657655..1657944,1658257..1658546,1658691..1659016,1659109..1659199))	Theileria orientalis strain Shintoku	20713567
TOT_010000679	CDS	TOT_010000679	NC_025260.1	1659417	1659852	R	hypothetical protein	complement(join(1659417..1659512,1659607..1659666,1659697..1659731,1659765..1659852))	Theileria orientalis strain Shintoku	20713568
TOT_010000680	CDS	TOT_010000680	NC_025260.1	1660056	1662217	R	conserved hypothetical protein	complement(join(1660056..1660220,1660348..1660500,1660652..1662217))	Theileria orientalis strain Shintoku	20713569
TOT_010000681	CDS	TOT_010000681	NC_025260.1	1662374	1668917	R	conserved hypothetical protein	complement(join(1662374..1662651,1662925..1663121,1663270..1665548,1665849..1668917))	Theileria orientalis strain Shintoku	20713570
TOT_010000682	CDS	TOT_010000682	NC_025260.1	1669551	1670385	D	sybindin-like protein family protein; uncharacterized protein	join(1669551..1670082,1670204..1670385)	Theileria orientalis strain Shintoku	20713571
TOT_010000683	CDS	TOT_010000683	NC_025260.1	1670457	1674070	R	conserved hypothetical protein	complement(join(1670457..1670877,1670977..1671280,1671525..1671593,1671720..1671777,1671936..1672124,1672222..1672464,1672498..1673136,1673219..1674070))	Theileria orientalis strain Shintoku	20713572
TOT_010000684	CDS	TOT_010000684	NC_025260.1	1674189	1675745	R	ribonucleotide reductase R2 subunit/ribonucleoside-diphosphate reductase small chain	complement(join(1674189..1674463,1674559..1674835,1674953..1675214,1675290..1675459,1675671..1675745))	Theileria orientalis strain Shintoku	20713573
TOT_010000685	CDS	TOT_010000685	NC_025260.1	1676302	1677648	R	elongation factor 1-alpha	complement(1676302..1677648)	Theileria orientalis strain Shintoku	20713574
TOT_010000686	CDS	TOT_010000686	NC_025260.1	1678445	1680956	D	glutamyl/glutaminyl-tRNA synthetase, class Ic family protein; uncharacterized protein	join(1678445..1678863,1678988..1679074,1679105..1679186,1679221..1679330,1679399..1679542,1679621..1679749,1679804..1679875,1680011..1680180,1680241..1680390,1680420..1680483,1680563..1680701,1680813..1680956)	Theileria orientalis strain Shintoku	20713575
TOT_010001286	CDS	TOT_010001286	NC_025260.1	1681101	1682721	D	cell division control protein 2 homolog	join(1681101..1681239,1681401..1681544,1681575..1681734,1681911..1682044,1682182..1682351,1682572..1682721)	Theileria orientalis strain Shintoku	20714085
TOT_010000688	CDS	TOT_010000688	NC_025260.1	1683492	1684481	R	molecular chaperone DnaJ	complement(join(1683492..1683669,1683757..1683929,1684006..1684463,1684469..1684481))	Theileria orientalis strain Shintoku	20713576
TOT_010000689	CDS	TOT_010000689	NC_025260.1	1684848	1686574	D	regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein; uncharacterized protein	join(1684848..1684983,1685032..1685085,1685196..1686110,1686249..1686382,1686476..1686574)	Theileria orientalis strain Shintoku	20713577
TOT_010000690	CDS	TOT_010000690	NC_025260.1	1687149	1696337	R	protein kinase, core domain containing protein; uncharacterized protein	complement(join(1687149..1687340,1688166..1689158,1689747..1696337))	Theileria orientalis strain Shintoku	20713578
TOT_010000691	CDS	TOT_010000691	NC_025260.1	1697694	1698628	D	ubiquitin carrier protein	join(1697694..1697732,1697774..1697869,1697902..1697979,1698068..1698218,1698289..1698443,1698488..1698532,1698566..1698628)	Theileria orientalis strain Shintoku	20713579
TOT_010000692	CDS	TOT_010000692	NC_025260.1	1698804	1699494	D	mitochondrial inner membrane protein	join(1698804..1698930,1698974..1699033,1699154..1699494)	Theileria orientalis strain Shintoku	20713580
TOT_010000693	CDS	TOT_010000693	NC_025260.1	1699837	1701009	R	tumour susceptibility gene 101 family protein; uncharacterized protein	complement(join(1699837..1700130,1700171..1700515,1700620..1700858,1700898..1701009))	Theileria orientalis strain Shintoku	20713581
TOT_010001191	CDS	TOT_010001191	NC_025260.1	1701290	1702027	D	glutaredoxin-related protein family protein; uncharacterized protein	join(1701290..1701589,1701625..1701657,1701701..1701802,1701839..1702027)	Theileria orientalis strain Shintoku	20713991
TOT_010000695	CDS	TOT_010000695	NC_025260.1	1702679	1704631	D	conserved hypothetical protein	join(1702679..1702752,1702786..1702943,1702975..1703972,1704356..1704631)	Theileria orientalis strain Shintoku	20713582
TOT_010000696	CDS	TOT_010000696	NC_025260.1	1704712	1706670	R	conserved hypothetical protein	complement(join(1704712..1704843,1704943..1705340,1705556..1705990,1706022..1706142,1706363..1706434,1706479..1706670))	Theileria orientalis strain Shintoku	20713583
TOT_010001287	CDS	TOT_010001287	NC_025260.1	1706692	1709025	R	conserved hypothetical protein	complement(1706692..1709025)	Theileria orientalis strain Shintoku	20714086
TOT_010000698	CDS	TOT_010000698	NC_025260.1	1709162	1711837	R	disrupter of silencing protein	complement(join(1709162..1709370,1709415..1709819,1710136..1710253,1710348..1710457,1710564..1710774,1710918..1711154,1711276..1711532,1711564..1711632,1711696..1711837))	Theileria orientalis strain Shintoku	20713584
TOT_010000699	CDS	TOT_010000699	NC_025260.1	1712578	1715544	D	immunoglobulin E-set domain containing protein; uncharacterized protein	1712578..1715544	Theileria orientalis strain Shintoku	20713585
TOT_010001192	CDS	TOT_010001192	NC_025260.1	1715604	1716114	D	conserved hypothetical protein	join(1715604..1715744,1715790..1715883,1716041..1716114)	Theileria orientalis strain Shintoku	20713992
TOT_010000700	CDS	TOT_010000700	NC_025260.1	1716139	1717442	R	conserved hypothetical protein	complement(join(1716139..1716236,1716268..1716368,1716460..1716588,1716620..1716728,1716768..1716860,1716893..1717267,1717358..1717442))	Theileria orientalis strain Shintoku	20713586
TOT_010000701	CDS	TOT_010000701	NC_025260.1	1717614	1718722	D	conserved hypothetical protein	join(1717614..1717997,1718055..1718104,1718139..1718314,1718344..1718435,1718591..1718722)	Theileria orientalis strain Shintoku	20713587
TOT_010000702	CDS	TOT_010000702	NC_025260.1	1718893	1719921	R	acyl-CoA-binding protein, ACBP domain containing protein; uncharacterized protein	complement(join(1718893..1719014,1719087..1719221,1719257..1719327,1719358..1719404,1719438..1719543,1719621..1719699,1719753..1719921))	Theileria orientalis strain Shintoku	20713588
TOT_010000703	CDS	TOT_010000703	NC_025260.1	1720041	1721903	R	SET domain containing protein; uncharacterized protein	complement(join(1720041..1720121,1720160..1720247,1720285..1720412,1720442..1720863,1721050..1721205,1721237..1721683,1721720..1721903))	Theileria orientalis strain Shintoku	20713589
TOT_010001288	CDS	TOT_010001288	NC_025260.1	1722626	1724353	D	ribonucleolar protein	1722626..1724353	Theileria orientalis strain Shintoku	20714087
TOT_010000705	CDS	TOT_010000705	NC_025260.1	1724455	1725034	D	conserved hypothetical protein	join(1724455..1724700,1724735..1725034)	Theileria orientalis strain Shintoku	20713590
TOT_010000706	CDS	TOT_010000706	NC_025260.1	1725309	1731506	R	histone acetyltransferase	complement(join(1725309..1725530,1725643..1725828,1725860..1725989,1726064..1726168,1726300..1726371,1726403..1726568,1726598..1726910,1726949..1727143,1727296..1727599,1727676..1727782,1727895..1728010,1728340..1728821,1728982..1731506))	Theileria orientalis strain Shintoku	20713591
TOT_010000707	CDS	TOT_010000707	NC_025260.1	1731825	1734921	D	heat-shock protein	join(1731825..1732046,1732077..1732224,1732257..1732342,1732373..1732635,1732668..1733051,1733151..1733334,1733366..1733490,1733712..1733817,1733904..1734005,1734239..1734486,1734651..1734921)	Theileria orientalis strain Shintoku	20713592
TOT_010000708	CDS	TOT_010000708	NC_025260.1	1735153	1735676	R	clathrin assembly protein	complement(join(1735153..1735290,1735321..1735465,1735495..1735676))	Theileria orientalis strain Shintoku	20713593
TOT_010000709	CDS	TOT_010000709	NC_025260.1	1735821	1737959	R	conserved hypothetical protein	complement(join(1735821..1736725,1736833..1736958,1737031..1737880,1737912..1737959))	Theileria orientalis strain Shintoku	20713594
TOT_010000710	CDS	TOT_010000710	NC_025260.1	1738853	1742175	D	DNA mismatch repair protein family protein; uncharacterized protein	join(1738853..1739922,1740008..1740155,1740217..1740306,1740427..1740523,1740680..1741342,1741470..1741657,1741697..1741878,1742076..1742175)	Theileria orientalis strain Shintoku	20713595
TOT_010001289	CDS	TOT_010001289	NC_025260.1	1742684	1743458	R	SJCHGC07794 protein; uncharacterized protein	complement(join(1742684..1743207,1743347..1743458))	Theileria orientalis strain Shintoku	20714088
TOT_010000712	CDS	TOT_010000712	NC_025260.1	1744053	1747239	R	conserved hypothetical protein	complement(join(1744053..1744343,1744712..1745029,1745178..1745285,1745317..1745530,1745605..1745696,1745789..1745925,1745980..1746192,1746318..1746576,1746606..1746731,1746764..1746969,1747000..1747087,1747129..1747239))	Theileria orientalis strain Shintoku	20713596
TOT_010001290	CDS	TOT_010001290	NC_025260.1	1747853	1751674	D	conserved hypothetical protein	join(1747853..1748262,1748315..1748526,1748563..1748663,1748701..1748829,1748892..1749020,1749053..1749367,1749398..1749493,1749525..1750045,1750079..1750517,1750558..1750741,1750802..1750930,1750963..1751062,1751608..1751674)	Theileria orientalis strain Shintoku	20714089
TOT_010000714	CDS	TOT_010000714	NC_025260.1	1751768	1753798	R	tyrosyl-tRNA synthetase	complement(join(1751768..1752010,1752051..1752254,1752285..1752360,1752498..1752669,1752704..1753366,1753399..1753798))	Theileria orientalis strain Shintoku	20713597
TOT_010000715	CDS	TOT_010000715	NC_025260.1	1754724	1755941	D	conserved hypothetical protein	join(1754724..1755148,1755179..1755941)	Theileria orientalis strain Shintoku	20713598
TOT_010000716	CDS	TOT_010000716	NC_025260.1	1756167	1759065	R	conserved hypothetical protein	complement(join(1756167..1758112,1758150..1758603,1758637..1759065))	Theileria orientalis strain Shintoku	20713599
TOT_010000717	CDS	TOT_010000717	NC_025260.1	1759185	1759781	D	clathrin assembly protein	join(1759185..1759492,1759523..1759781)	Theileria orientalis strain Shintoku	20713600
TOT_010000718	CDS	TOT_010000718	NC_025260.1	1759969	1761488	R	eukaryotic translation initiation factor	complement(join(1759969..1760058,1760107..1760274,1760425..1761051,1761132..1761488))	Theileria orientalis strain Shintoku	20713601
TOT_010000719	CDS	TOT_010000719	NC_025260.1	1761772	1763752	D	conserved hypothetical protein	join(1761772..1762127,1762158..1762377,1762407..1762578,1762656..1763139,1763251..1763324,1763424..1763752)	Theileria orientalis strain Shintoku	20713602
TOT_010000720	CDS	TOT_010000720	NC_025260.1	1763866	1765563	D	conserved hypothetical protein	join(1763866..1764079,1764114..1764174,1764284..1764436,1764490..1764552,1764877..1765019,1765265..1765563)	Theileria orientalis strain Shintoku	20713603
TOT_010000721	CDS	TOT_010000721	NC_025260.1	1765850	1768579	R	cyclin-like F-box domain containing protein; uncharacterized protein	complement(1765850..1768579)	Theileria orientalis strain Shintoku	20713604
TOT_010001291	CDS	TOT_010001291	NC_025260.1	1768974	1769540	D	conserved hypothetical protein	1768974..1769540	Theileria orientalis strain Shintoku	20714090
TOT_010000723	CDS	TOT_010000723	NC_025260.1	1769806	1771476	D	chromatin assembly factor subunit	join(1769806..1771406,1771452..1771476)	Theileria orientalis strain Shintoku	20713605
TOT_010000724	CDS	TOT_010000724	NC_025260.1	1771534	1778389	R	myosin	complement(join(1771534..1771795,1771977..1772122,1772325..1772808,1772933..1773269,1773408..1773536,1773658..1773921,1774159..1775504,1775707..1776082,1776313..1776400,1776491..1777816,1777952..1778130,1778164..1778287,1778327..1778389))	Theileria orientalis strain Shintoku	20713606
TOT_010000725	CDS	TOT_010000725	NC_025260.1	1778524	1778777	D	hypothetical protein	join(1778524..1778620,1778686..1778777)	Theileria orientalis strain Shintoku	20713607
TOT_010000726	CDS	TOT_010000726	NC_025260.1	1779321	1782332	D	1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase	join(1779321..1779954,1780042..1782332)	Theileria orientalis strain Shintoku	20713608
TOT_010000727	CDS	TOT_010000727	NC_025260.1	1782643	1786384	R	conserved hypothetical protein	complement(join(1782643..1783239,1783333..1783375,1783407..1783861,1783895..1784450,1784578..1784776,1784812..1784950,1785110..1785907,1786244..1786384))	Theileria orientalis strain Shintoku	20713609
TOT_010000728	CDS	TOT_010000728	NC_025260.1	1786835	1787580	R	conserved hypothetical protein	complement(join(1786835..1787170,1787209..1787580))	Theileria orientalis strain Shintoku	20713610
TOT_010000729	CDS	TOT_010000729	NC_025260.1	1787600	1789094	R	conserved hypothetical protein	complement(join(1787600..1787898,1787936..1789094))	Theileria orientalis strain Shintoku	20713611
TOT_010000730	CDS	TOT_010000730	NC_025260.1	1789745	1792008	D	transcriptional adaptor	join(1789745..1790186,1790216..1790283,1790343..1790450,1790504..1790609,1790633..1790855,1791055..1791391,1791505..1792008)	Theileria orientalis strain Shintoku	20713612
TOT_010000731	CDS	TOT_010000731	NC_025260.1	1792123	1793643	D	conserved hypothetical protein	1792123..1793643	Theileria orientalis strain Shintoku	20713613
TOT_010000732	CDS	TOT_010000732	NC_025260.1	1793828	1797493	R	conserved hypothetical protein	complement(1793828..1797493)	Theileria orientalis strain Shintoku	20713614
TOT_010000733	CDS	TOT_010000733	NC_025260.1	1798428	1801364	R	conserved hypothetical protein	complement(1798428..1801364)	Theileria orientalis strain Shintoku	20713615
TOT_010000734	CDS	TOT_010000734	NC_025260.1	1802835	1803803	R	hypothetical protein	complement(1802835..1803803)	Theileria orientalis strain Shintoku	20713616
TOT_010000735	CDS	TOT_010000735	NC_025260.1	1804387	1806827	R	cyclin-dependent kinase CRK3	complement(join(1804387..1804647,1805443..1805519,1805692..1806443,1806592..1806827))	Theileria orientalis strain Shintoku	20713617
TOT_010000736	CDS	TOT_010000736	NC_025260.1	1807060	1807704	D	hypothetical protein	join(1807060..1807080,1807141..1807313,1807416..1807704)	Theileria orientalis strain Shintoku	20713618
TOT_010001292	CDS	TOT_010001292	NC_025260.1	1807666	1809374	R	SPla/RYanodine receptor SPRY domain containing protein; uncharacterized protein	complement(join(1807666..1807812,1807896..1808075,1808125..1808201,1808232..1808345,1808536..1808674,1808704..1808825,1808857..1809011,1809043..1809191,1809228..1809374))	Theileria orientalis strain Shintoku	20714091
TOT_010000738	CDS	TOT_010000738	NC_025260.1	1809733	1810230	D	conserved hypothetical protein	join(1809733..1809923,1810012..1810112,1810139..1810230)	Theileria orientalis strain Shintoku	20713619
TOT_010000739	CDS	TOT_010000739	NC_025260.1	1810545	1812433	D	Bromodomain containing protein; uncharacterized protein	join(1810545..1811309,1811579..1812433)	Theileria orientalis strain Shintoku	20713620
TOT_010000740	CDS	TOT_010000740	NC_025260.1	1812713	1813824	R	phosphomannomutase	complement(join(1812713..1812823,1812989..1813066,1813096..1813165,1813202..1813345,1813378..1813469,1813503..1813579,1813610..1813724,1813759..1813824))	Theileria orientalis strain Shintoku	20713621
TOT_010000741	CDS	TOT_010000741	NC_025260.1	1813924	1814953	D	hypothetical protein	join(1813924..1813988,1814021..1814237,1814302..1814382,1814415..1814489,1814522..1814695,1814729..1814829,1814860..1814953)	Theileria orientalis strain Shintoku	20713622
TOT_010000742	CDS	TOT_010000742	NC_025260.1	1815240	1816760	D	Yip1 domain containing protein; uncharacterized protein	join(1815240..1815333,1815466..1816160,1816224..1816760)	Theileria orientalis strain Shintoku	20713623
TOT_010000743	CDS	TOT_010000743	NC_025260.1	1817406	1819100	R	eukaryotic initiation factor 3, gamma subunit family protein; uncharacterized protein	complement(join(1817406..1817656,1817716..1818189,1818279..1818417,1818554..1818663,1818696..1818958,1818991..1819100))	Theileria orientalis strain Shintoku	20713624
TOT_010000744	CDS	TOT_010000744	NC_025260.1	1819335	1819956	R	ribosomal protein L11	complement(join(1819335..1819568,1819607..1819727,1819772..1819956))	Theileria orientalis strain Shintoku	20713625
TOT_010000745	CDS	TOT_010000745	NC_025260.1	1820187	1821338	D	actin	1820187..1821338	Theileria orientalis strain Shintoku	20713626
TOT_010000746	CDS	TOT_010000746	NC_025260.1	1821528	1822937	R	conserved hypothetical protein	complement(1821528..1822937)	Theileria orientalis strain Shintoku	20713627
TOT_010000747	CDS	TOT_010000747	NC_025260.1	1823139	1824354	D	bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein; uncharacterized protein	join(1823139..1823505,1823538..1824115,1824166..1824354)	Theileria orientalis strain Shintoku	20713628
TOT_010000748	CDS	TOT_010000748	NC_025260.1	1824532	1826787	D	conserved hypothetical protein	join(1824532..1824685,1824722..1824820,1824873..1825014,1825048..1825150,1825181..1825383,1825414..1825510,1825542..1825607,1825720..1826235,1826381..1826509,1826541..1826625,1826660..1826787)	Theileria orientalis strain Shintoku	20713629
TOT_010000749	CDS	TOT_010000749	NC_025260.1	1827247	1827637	D	conserved hypothetical protein	join(1827247..1827404,1827436..1827505,1827536..1827637)	Theileria orientalis strain Shintoku	20713630
TOT_010000750	CDS	TOT_010000750	NC_025260.1	1827933	1831137	R	vacuolar protein sorting-associated protein 35 family protein; uncharacterized protein	complement(join(1827933..1828547,1828830..1829096,1829333..1829914,1829935..1830104,1830149..1830905,1831018..1831137))	Theileria orientalis strain Shintoku	20713631
TOT_010001293	CDS	TOT_010001293	NC_025260.1	1831395	1833466	D	conserved hypothetical protein	join(1831395..1832491,1832522..1832627,1832816..1833466)	Theileria orientalis strain Shintoku	20714092
TOT_010000752	CDS	TOT_010000752	NC_025260.1	1833531	1833788	R	conserved hypothetical protein	complement(join(1833531..1833698,1833729..1833788))	Theileria orientalis strain Shintoku	20713632
TOT_010000753	CDS	TOT_010000753	NC_025260.1	1834024	1838666	D	pre-mRNA splicing factor	join(1834024..1834103,1834142..1834195,1834231..1834524,1834555..1834613,1834645..1835021,1835135..1835252,1835286..1835434,1835520..1835849,1836011..1836145,1836285..1836500,1836750..1836980,1837153..1837333,1837410..1837837,1838011..1838167,1838410..1838666)	Theileria orientalis strain Shintoku	20713633
TOT_010000754	CDS	TOT_010000754	NC_025260.1	1838735	1839199	R	D111/G-patch domain containing protein; uncharacterized protein	complement(join(1838735..1839117,1839157..1839199))	Theileria orientalis strain Shintoku	20713634
TOT_010000755	CDS	TOT_010000755	NC_025260.1	1839993	1842048	D	conserved hypothetical protein	join(1839993..1840078,1840109..1840205,1840235..1840373,1840430..1840585,1840691..1840878,1840969..1841152,1841194..1841307,1841351..1841420,1841769..1842048)	Theileria orientalis strain Shintoku	20713635
TOT_010000756	CDS	TOT_010000756	NC_025260.1	1842377	1842652	D	mitochondrial import inner membrane translocase subunit	1842377..1842652	Theileria orientalis strain Shintoku	20713636
TOT_010000757	CDS	TOT_010000757	NC_025260.1	1842940	1845301	R	conserved hypothetical protein	complement(join(1842940..1843718,1843764..1844193,1844312..1844392,1844423..1845301))	Theileria orientalis strain Shintoku	20713637
TOT_010000758	CDS	TOT_010000758	NC_025260.1	1845339	1846527	R	conserved hypothetical protein	complement(join(1845339..1845492,1845524..1845583,1845746..1845844,1845875..1846023,1846053..1846164,1846196..1846527))	Theileria orientalis strain Shintoku	20713638
TOT_010000759	CDS	TOT_010000759	NC_025260.1	1846956	1848585	D	aspartyl protease	join(1846956..1846959,1846993..1847525,1847558..1847735,1847779..1847842,1847881..1848020,1848056..1848079,1848111..1848136,1848166..1848268,1848303..1848406,1848439..1848471,1848505..1848585)	Theileria orientalis strain Shintoku	20713639
TOT_010000760	CDS	TOT_010000760	NC_025260.1	1849352	1850053	D	ubiquitin carrier protein	join(1849352..1849401,1849436..1849515,1849547..1849714,1849746..1849874,1849911..1850053)	Theileria orientalis strain Shintoku	20713640
TOT_010000761	CDS	TOT_010000761	NC_025260.1	1850508	1853732	D	RAD54 homologue; recombinational repair protein	join(1850508..1850637,1850665..1850875,1850906..1851009,1851039..1851301,1851332..1851428,1851461..1851549,1851582..1851668,1851829..1851882,1851922..1852023,1852068..1852132,1852174..1852285,1852317..1852586,1852622..1852756,1852825..1853119,1853302..1853346,1853387..1853589,1853628..1853732)	Theileria orientalis strain Shintoku	20713641
TOT_010000762	CDS	TOT_010000762	NC_025260.1	1853788	1854089	R	Os05g0389300 protein; uncharacterized protein	complement(join(1853788..1853919,1853949..1854089))	Theileria orientalis strain Shintoku	20713642
TOT_010000763	CDS	TOT_010000763	NC_025260.1	1854571	1858167	D	conserved hypothetical protein	1854571..1858167	Theileria orientalis strain Shintoku	20713643
TOT_010000764	CDS	TOT_010000764	NC_025260.1	1858564	1862445	D	ubiquitination-mediated degradation component	1858564..1862445	Theileria orientalis strain Shintoku	20713644
TOT_010001294	CDS	TOT_010001294	NC_025260.1	1862727	1869944	R	DNA-directed RNA polymerase	complement(join(1862727..1862989,1863292..1863638,1863777..1863864,1864050..1864270,1864439..1865307,1865434..1866655,1866818..1868489,1868538..1868921,1869066..1869445,1869477..1869613,1869645..1869944))	Theileria orientalis strain Shintoku	20714093
TOT_010000766	CDS	TOT_010000766	NC_025260.1	1870472	1871764	R	ADP-ribosylation factor GTPase activating protein	complement(join(1870472..1870571,1870595..1870806,1870848..1870973,1871079..1871583,1871616..1871764))	Theileria orientalis strain Shintoku	20713645
TOT_010000767	CDS	TOT_010000767	NC_025260.1	1872101	1873090	R	dephospho-CoA kinase family protein; uncharacterized protein	complement(join(1872101..1872215,1872283..1872430,1872611..1872833,1872865..1872923,1872955..1873090))	Theileria orientalis strain Shintoku	20713646
TOT_010000768	CDS	TOT_010000768	NC_025260.1	1873660	1874875	R	complexed with cef1p	complement(join(1873660..1874496,1874535..1874603,1874640..1874710,1874791..1874875))	Theileria orientalis strain Shintoku	20713647
TOT_010000769	CDS	TOT_010000769	NC_025260.1	1875285	1877066	R	zinc finger, CCCH-type domain containing protein; uncharacterized protein	complement(join(1875285..1875844,1876066..1876389,1876511..1877066))	Theileria orientalis strain Shintoku	20713648
TOT_010000770	CDS	TOT_010000770	NC_025260.1	1878589	1881319	R	cyclophilin peptidyl-prolyl cis-trans isomerase protein	complement(join(1878589..1878657,1878789..1879000,1879067..1879279,1879323..1879417,1879571..1879650,1879807..1880247,1880438..1880684,1880715..1880898,1880929..1881168,1881199..1881319))	Theileria orientalis strain Shintoku	20713649
TOT_010000771	CDS	TOT_010000771	NC_025260.1	1881585	1883151	D	conserved hypothetical protein	join(1881585..1881870,1881960..1882018,1882106..1882471,1882576..1882694,1882820..1882885,1882947..1883151)	Theileria orientalis strain Shintoku	20713650
TOT_010000772	CDS	TOT_010000772	NC_025260.1	1883361	1884905	D	protein of unknown function DUF81 family protein; uncharacterized protein	1883361..1884905	Theileria orientalis strain Shintoku	20713651
TOT_010000773	CDS	TOT_010000773	NC_025260.1	1885274	1887589	D	nucleic acid binding, OB-fold, tRNA/helicase-type domain containing protein; uncharacterized protein	join(1885274..1885511,1885542..1886083,1886121..1886192,1886232..1886369,1886489..1886551,1886583..1886708,1886785..1886841,1886939..1887099,1887204..1887356,1887391..1887589)	Theileria orientalis strain Shintoku	20713652
TOT_010001295	CDS	TOT_010001295	NC_025260.1	1888574	1892092	D	phosphatidylinositol 4-kinase	join(1888574..1890221,1890876..1892092)	Theileria orientalis strain Shintoku	20714094
TOT_010000775	CDS	TOT_010000775	NC_025260.1	1892425	1893387	D	conserved hypothetical protein	join(1892425..1893207,1893286..1893387)	Theileria orientalis strain Shintoku	20713653
TOT_010000776	CDS	TOT_010000776	NC_025260.1	1893590	1896156	R	DEAD-box family helicase	complement(join(1893590..1893863,1894037..1894137,1894345..1894669,1894714..1894964,1895055..1895167,1895203..1895533,1895567..1895674,1895707..1896156))	Theileria orientalis strain Shintoku	20713654
TOT_010000777	CDS	TOT_010000777	NC_025260.1	1896886	1897989	D	conserved hypothetical protein	1896886..1897989	Theileria orientalis strain Shintoku	20713655
TOT_010000778	CDS	TOT_010000778	NC_025260.1	1898232	1899764	D	protein kinase domain containing protein; uncharacterized protein	join(1898232..1898307,1898401..1899705,1899763..1899764)	Theileria orientalis strain Shintoku	20713656
TOT_010001296	CDS	TOT_010001296	NC_025260.1	1902371	1903646	D	conserved hypothetical protein	join(1902371..1902783,1902815..1902971,1903104..1903157,1903197..1903646)	Theileria orientalis strain Shintoku	20714095
TOT_010001193	CDS	TOT_010001193	NC_025260.1	1903850	1905222	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(1903850..1903903,1903970..1904026,1904070..1904162,1904192..1904302,1904421..1904508,1904629..1904732,1904883..1905034,1905070..1905162,1905207..1905222))	Theileria orientalis strain Shintoku	20713993
TOT_010000780	CDS	TOT_010000780	NC_025260.1	1905750	1906171	R	signal recognition particle, SRP9 subunit family protein; uncharacterized protein	complement(join(1905750..1905799,1905838..1905964,1905995..1906063,1906100..1906171))	Theileria orientalis strain Shintoku	20713657
TOT_010000781	CDS	TOT_010000781	NC_025260.1	1906467	1908205	D	nonsense-mediated mRNA decay protein	join(1906467..1906678,1906760..1907102,1907135..1907869,1907912..1908039,1908085..1908205)	Theileria orientalis strain Shintoku	20713658
TOT_010000782	CDS	TOT_010000782	NC_025260.1	1908358	1909474	D	Brix domain containing protein; uncharacterized protein	join(1908358..1908606,1908639..1908697,1908731..1908831,1908863..1909150,1909182..1909276,1909316..1909393,1909406..1909474)	Theileria orientalis strain Shintoku	20713659
TOT_010000783	CDS	TOT_010000783	NC_025260.1	1909656	1910777	D	tRNA-2'-O-ribose methyltransferase	1909656..1910777	Theileria orientalis strain Shintoku	20713660
TOT_010000784	CDS	TOT_010000784	NC_025260.1	1911055	1914447	R	clathrin/coatomer adaptor, adaptin-like, N-terminal domain containing protein; uncharacterized protein	complement(join(1911055..1911217,1911335..1911882,1911989..1912054,1912086..1912163,1912359..1912443,1912489..1912570,1912697..1912871,1912948..1913085,1913126..1913292,1913323..1913624,1913658..1914337,1914370..1914447))	Theileria orientalis strain Shintoku	20713661
TOT_010000785	CDS	TOT_010000785	NC_025260.1	1914690	1914967	D	conserved hypothetical protein	join(1914690..1914780,1914816..1914967)	Theileria orientalis strain Shintoku	20713662
TOT_010001297	CDS	TOT_010001297	NC_025260.1	1915470	1918790	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(1915470..1915619,1915650..1917620,1917780..1917873,1917904..1918048,1918298..1918790)	Theileria orientalis strain Shintoku	20714096
TOT_010000787	CDS	TOT_010000787	NC_025260.1	1918844	1921984	D	zinc finger, RING-type domain containing protein; uncharacterized protein	1918844..1921984	Theileria orientalis strain Shintoku	20713663
TOT_010001298	CDS	TOT_010001298	NC_025260.1	1922519	1924818	R	flavodoxin/nitric oxide synthase domain containing protein; uncharacterized protein	complement(join(1922519..1922704,1922734..1922933,1923180..1923868,1923932..1924818))	Theileria orientalis strain Shintoku	20714097
TOT_010000789	CDS	TOT_010000789	NC_025260.1	1924856	1925401	R	conserved hypothetical protein	complement(join(1924856..1925238,1925272..1925401))	Theileria orientalis strain Shintoku	20713664
TOT_010001299	CDS	TOT_010001299	NC_025260.1	1925459	1928713	R	conserved hypothetical protein	complement(join(1925459..1925564,1925604..1925653,1925684..1925770,1925801..1925885,1925960..1926063,1926146..1926867,1926903..1927116,1927291..1928005,1928046..1928092,1928125..1928232,1928262..1928415,1928445..1928578,1928609..1928713))	Theileria orientalis strain Shintoku	20714098
TOT_010000791	CDS	TOT_010000791	NC_025260.1	1929578	1932278	R	5'-3' exoribonuclease 1	complement(join(1929578..1929650,1929680..1929839,1929950..1930015,1930047..1930099,1930157..1930305,1930422..1930603,1930672..1930795,1930835..1930917,1930988..1931171,1931212..1931326,1931357..1931505,1931572..1931730,1931761..1931855,1931888..1931969,1932005..1932180,1932200..1932278))	Theileria orientalis strain Shintoku	20713665
TOT_010000792	CDS	TOT_010000792	NC_025260.1	1933025	1934622	D	RUB1 conjugating enzyme Ubc12 family protein; uncharacterized protein	join(1933025..1933308,1933339..1933384,1933415..1933519,1933550..1933619,1933652..1933926,1934121..1934294,1934386..1934622)	Theileria orientalis strain Shintoku	20713666
TOT_010000793	CDS	TOT_010000793	NC_025260.1	1934720	1936196	D	26S proteasome subunit 4	join(1934720..1934753,1934786..1934899,1934940..1935016,1935051..1935700,1935755..1936196)	Theileria orientalis strain Shintoku	20713667
TOT_010000794	CDS	TOT_010000794	NC_025260.1	1936853	1937387	D	Target SNARE coiled-coil region domain containing protein; uncharacterized protein	join(1936853..1936867,1936898..1937004,1937219..1937387)	Theileria orientalis strain Shintoku	20713668
TOT_010000795	CDS	TOT_010000795	NC_025260.1	1937547	1938902	R	conserved hypothetical protein	complement(1937547..1938902)	Theileria orientalis strain Shintoku	20713669
TOT_010000796	CDS	TOT_010000796	NC_025260.1	1939025	1941608	R	conserved hypothetical protein	complement(join(1939025..1939153,1939183..1939404,1939481..1939622,1939653..1939897,1939942..1940160,1940255..1940345,1940383..1940477,1940510..1940635,1940671..1940757,1940790..1941608))	Theileria orientalis strain Shintoku	20713670
TOT_010000797	CDS	TOT_010000797	NC_025260.1	1941813	1944601	D	mitochondrial transcription termination factor-related family protein; uncharacterized protein	join(1941813..1943759,1943870..1944601)	Theileria orientalis strain Shintoku	20713671
TOT_010000798	CDS	TOT_010000798	NC_025260.1	1944876	1946285	R	DNA repair protein	complement(join(1944876..1945000,1945163..1945237,1945269..1945348,1945550..1945620,1945730..1946073,1946105..1946285))	Theileria orientalis strain Shintoku	20713672
TOT_010001300	CDS	TOT_010001300	NC_025260.1	1947097	1948137	D	K Homology, type 1 domain containing protein; uncharacterized protein	1947097..1948137	Theileria orientalis strain Shintoku	20714099
TOT_010000800	CDS	TOT_010000800	NC_025260.1	1948510	1951384	R	signal recognition particle protein 2	complement(join(1948510..1948732,1948862..1948967,1949169..1949313,1949730..1949857,1949949..1950049,1950341..1950740,1950836..1950989,1951120..1951272,1951307..1951384))	Theileria orientalis strain Shintoku	20713673
TOT_010000801	CDS	TOT_010000801	NC_025260.1	1951797	1953475	R	eukaryotic translation initiation factor 2 subunit alpha	complement(join(1951797..1952033,1952172..1952258,1952353..1952488,1952759..1952874,1952908..1952994,1953076..1953296,1953328..1953475))	Theileria orientalis strain Shintoku	20713674
TOT_010000803	CDS	TOT_010000803	NC_025260.1	1953794	1954858	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(1953794..1954008,1954099..1954214,1954247..1954381,1954417..1954486,1954522..1954615,1954697..1954858)	Theileria orientalis strain Shintoku	20713675
TOT_010000804	CDS	TOT_010000804	NC_025260.1	1955123	1956121	R	conserved hypothetical protein	complement(join(1955123..1955397,1955507..1955878,1955938..1955964,1956034..1956121))	Theileria orientalis strain Shintoku	20713676
TOT_010000805	CDS	TOT_010000805	NC_025260.1	1956367	1957479	R	D111/G-patch domain containing protein; uncharacterized protein	complement(join(1956367..1957043,1957086..1957479))	Theileria orientalis strain Shintoku	20713677
TOT_010000806	CDS	TOT_010000806	NC_025260.1	1957653	1958691	R	NAF1 domain containing protein; uncharacterized protein	complement(join(1957653..1957740,1957822..1957892,1957934..1958074,1958115..1958225,1958258..1958456,1958516..1958571,1958611..1958691))	Theileria orientalis strain Shintoku	20713678
TOT_010000807	CDS	TOT_010000807	NC_025260.1	1958837	1959133	D	hypothetical protein	1958837..1959133	Theileria orientalis strain Shintoku	20713679
TOT_010000808	CDS	TOT_010000808	NC_025260.1	1959172	1959967	R	zinc finger, TFIIS-type domain containing protein; uncharacterized protein	complement(join(1959172..1959482,1959517..1959967))	Theileria orientalis strain Shintoku	20713680
TOT_010000809	CDS	TOT_010000809	NC_025260.1	1960093	1960948	D	predicted protein	join(1960093..1960351,1960460..1960602,1960663..1960737,1960769..1960820,1960899..1960948)	Theileria orientalis strain Shintoku	20713681
TOT_010001194	CDS	TOT_010001194	NC_025260.1	1961201	1961999	D	ubiquinol-cytochrome C reductase complex subunit-like protein	join(1961201..1961426,1961494..1961763,1961899..1961999)	Theileria orientalis strain Shintoku	20713994
TOT_010000810	CDS	TOT_010000810	NC_025260.1	1962561	1963630	D	HAD superfamily hydrolase-like, type 3 domain containing protein; uncharacterized protein	join(1962561..1962912,1962942..1963630)	Theileria orientalis strain Shintoku	20713682
TOT_010000811	CDS	TOT_010000811	NC_025260.1	1963834	1965723	D	GMP synthase	join(1963834..1965389,1965666..1965723)	Theileria orientalis strain Shintoku	20713683
TOT_010000812	CDS	TOT_010000812	NC_025260.1	1966178	1968294	R	protein disulfide isomerase	complement(join(1966178..1966411,1966622..1966734,1966944..1967232,1967437..1967584,1967616..1967691,1967721..1967852,1967887..1968038,1968119..1968294))	Theileria orientalis strain Shintoku	20713684
TOT_010000813	CDS	TOT_010000813	NC_025260.1	1968476	1970118	D	conserved hypothetical protein	join(1968476..1968744,1968807..1968882,1968914..1968993,1969023..1969139,1969278..1969461,1969566..1969600,1969646..1969733,1969769..1969838,1969869..1969928,1970006..1970118)	Theileria orientalis strain Shintoku	20713685
TOT_010000814	CDS	TOT_010000814	NC_025260.1	1970217	1971429	R	splicing factor	complement(join(1970217..1970901,1971051..1971265,1971325..1971429))	Theileria orientalis strain Shintoku	20713686
TOT_010000815	CDS	TOT_010000815	NC_025260.1	1973029	1978932	D	Chromo domain containing protein; uncharacterized protein	join(1973029..1975333,1975460..1978143,1978465..1978932)	Theileria orientalis strain Shintoku	20713687
TOT_010001301	CDS	TOT_010001301	NC_025260.1	1980590	1981363	R	conserved hypothetical protein	complement(join(1980590..1980847,1980899..1981363))	Theileria orientalis strain Shintoku	20714100
TOT_010000817	CDS	TOT_010000817	NC_025260.1	1981758	1983615	D	conserved hypothetical protein	join(1981758..1981802,1981838..1982003,1982036..1982329,1982360..1983315,1983442..1983615)	Theileria orientalis strain Shintoku	20713688
TOT_010001302	CDS	TOT_010001302	NC_025260.1	1983907	1985380	D	conserved hypothetical protein	join(1983907..1984103,1984140..1984444,1984538..1984599,1984632..1984665,1984697..1984814,1984874..1984969,1985037..1985155,1985205..1985380)	Theileria orientalis strain Shintoku	20714101
TOT_010001303	CDS	TOT_010001303	NC_025260.1	1985639	1986825	D	DNA repair protein	join(1985639..1985866,1985929..1986111,1986143..1986247,1986281..1986349,1986382..1986519,1986577..1986825)	Theileria orientalis strain Shintoku	20714102
TOT_010000819	CDS	TOT_010000819	NC_025260.1	1987764	1990538	D	K Homology, type 1 domain containing protein; uncharacterized protein	join(1987764..1989485,1989732..1990538)	Theileria orientalis strain Shintoku	20713689
TOT_010000820	CDS	TOT_010000820	NC_025260.1	1991778	1995891	D	conserved hypothetical protein	join(1991778..1995753,1995791..1995891)	Theileria orientalis strain Shintoku	20713690
TOT_010000821	CDS	TOT_010000821	NC_025260.1	1995949	1996282	R	hypothetical protein	complement(join(1995949..1996047,1996226..1996282))	Theileria orientalis strain Shintoku	20713691
TOT_010000822	CDS	TOT_010000822	NC_025260.1	1996433	1997193	D	hypothetical protein	join(1996433..1996479,1996664..1997042,1997062..1997193)	Theileria orientalis strain Shintoku	20713692
TOT_010000823	CDS	TOT_010000823	NC_025260.1	1997347	1998452	R	conserved hypothetical protein	complement(join(1997347..1997463,1997505..1997644,1997675..1997753,1997783..1997941,1997981..1998083,1998157..1998452))	Theileria orientalis strain Shintoku	20713693
TOT_010000824	CDS	TOT_010000824	NC_025260.1	1998559	1999691	R	proteasome subunit beta type	complement(join(1998559..1998581,1998614..1998700,1998766..1998857,1998902..1999014,1999069..1999176,1999215..1999490,1999587..1999691))	Theileria orientalis strain Shintoku	20713694
TOT_010000825	CDS	TOT_010000825	NC_025260.1	2000044	2002522	R	conserved hypothetical protein	complement(join(2000044..2000200,2000239..2000863,2000937..2001087,2001120..2001275,2001311..2001442,2001473..2001579,2001649..2001852,2002153..2002231,2002271..2002327,2002403..2002522))	Theileria orientalis strain Shintoku	20713695
TOT_010000826	CDS	TOT_010000826	NC_025260.1	2002701	2003782	R	Rab GTPase	complement(join(2002701..2002762,2002825..2002867,2002987..2003055,2003087..2003160,2003208..2003335,2003405..2003627,2003734..2003782))	Theileria orientalis strain Shintoku	20713696
TOT_010000827	CDS	TOT_010000827	NC_025260.1	2004837	2005817	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	2004837..2005817	Theileria orientalis strain Shintoku	20713697
TOT_010000828	CDS	TOT_010000828	NC_025260.1	2005939	2007924	R	protein kinase	complement(join(2005939..2006002,2006045..2006173,2006372..2007924))	Theileria orientalis strain Shintoku	20713698
TOT_010000829	CDS	TOT_010000829	NC_025260.1	2008361	2009214	D	casein kinase II subunit beta	join(2008361..2008456,2008500..2008593,2008625..2008959,2009092..2009214)	Theileria orientalis strain Shintoku	20713699
TOT_010000830	CDS	TOT_010000830	NC_025260.1	2009365	2010429	R	conserved hypothetical protein	complement(join(2009365..2010113,2010144..2010429))	Theileria orientalis strain Shintoku	20713700
TOT_010000831	CDS	TOT_010000831	NC_025260.1	2010623	2014871	D	conserved hypothetical protein	join(2010623..2010687,2011219..2012170,2012411..2012531,2012566..2014871)	Theileria orientalis strain Shintoku	20713701
TOT_010000832	CDS	TOT_010000832	NC_025260.1	2015411	2015890	D	eukaryotic translation initiation factor	2015411..2015890	Theileria orientalis strain Shintoku	20713702
TOT_010000833	CDS	TOT_010000833	NC_025260.1	2016188	2016551	D	Tim10	join(2016188..2016264,2016359..2016455,2016486..2016551)	Theileria orientalis strain Shintoku	20713703
TOT_010000834	CDS	TOT_010000834	NC_025260.1	2016744	2017363	R	cytochrome C1 heme lyase	complement(join(2016744..2016885,2016918..2017363))	Theileria orientalis strain Shintoku	20713704
TOT_010001304	CDS	TOT_010001304	NC_025260.1	2017816	2018517	D	0; Pre-rRNA-processing protein PNO1	2017816..2018517	Theileria orientalis strain Shintoku	20714103
TOT_010001305	CDS	TOT_010001305	NC_025260.1	2019043	2019576	D	0; Conserved hypothetical protein	2019043..2019576	Theileria orientalis strain Shintoku	20714104
TOT_010000836	CDS	TOT_010000836	NC_025260.1	2020635	2021174	D	zinc finger, CCCH-type domain containing protein; uncharacterized protein	2020635..2021174	Theileria orientalis strain Shintoku	20713705
TOT_010000837	CDS	TOT_010000837	NC_025260.1	2021503	2021965	D	conserved hypothetical protein	join(2021503..2021733,2021765..2021965)	Theileria orientalis strain Shintoku	20713706
TOT_010000838	CDS	TOT_010000838	NC_025260.1	2022084	2024193	R	ribosomal protein L4/L1e family protein; uncharacterized protein	complement(join(2022084..2022173,2022431..2022691,2022797..2022905,2022968..2023083,2023113..2023222,2023257..2023385,2023415..2023559,2023622..2023830,2023852..2023960,2024056..2024193))	Theileria orientalis strain Shintoku	20713707
TOT_010000839	CDS	TOT_010000839	NC_025260.1	2024446	2024933	R	conserved hypothetical protein	complement(join(2024446..2024542,2024578..2024676,2024727..2024782,2024931..2024933))	Theileria orientalis strain Shintoku	20713708
TOT_010000840	CDS	TOT_010000840	NC_025260.1	2027039	2027789	D	conserved hypothetical protein	join(2027039..2027436,2027453..2027789)	Theileria orientalis strain Shintoku	20713709
TOT_010001306	CDS	TOT_010001306	NC_025260.1	2028075	2030400	R	conserved hypothetical protein	complement(join(2028075..2028212,2028307..2028461,2028560..2028722,2028774..2028859,2029086..2029316,2029466..2029545,2029567..2029743,2029808..2029917,2029947..2030051,2030083..2030219,2030295..2030400))	Theileria orientalis strain Shintoku	20714105
TOT_010000842	CDS	TOT_010000842	NC_025260.1	2030718	2031136	D	conserved hypothetical protein	join(2030718..2030837,2030872..2030957,2030992..2031136)	Theileria orientalis strain Shintoku	20713710
TOT_010000843	CDS	TOT_010000843	NC_025260.1	2031146	2033700	R	conserved hypothetical protein	complement(join(2031146..2031261,2031310..2031352,2031385..2031598,2031681..2031783,2032085..2032308,2032399..2032527,2032567..2032746,2032846..2032882,2032934..2033117,2033151..2033236,2033326..2033369,2033657..2033700))	Theileria orientalis strain Shintoku	20713711
TOT_010000844	CDS	TOT_010000844	NC_025260.1	2033873	2036487	D	conserved hypothetical protein	join(2033873..2036418,2036439..2036487)	Theileria orientalis strain Shintoku	20713712
TOT_010001307	CDS	TOT_010001307	NC_025260.1	2036679	2037102	R	exosome ribonuclease PH	complement(join(2036679..2036955,2036987..2037102))	Theileria orientalis strain Shintoku	20714106
TOT_010000846	CDS	TOT_010000846	NC_025260.1	2038066	2042883	D	DNA polymerase delta catalytic subunit	join(2038066..2038180,2038259..2038491,2038524..2038598,2038670..2039120,2039205..2039417,2039501..2039815,2039847..2039994,2040098..2040173,2040215..2040409,2040467..2040523,2040649..2040810,2040864..2040944,2041052..2041283,2041430..2041485,2041587..2041821,2041870..2041932,2042003..2042149,2042319..2042470,2042505..2042578,2042745..2042883)	Theileria orientalis strain Shintoku	20713713
TOT_010000847	CDS	TOT_010000847	NC_025260.1	2043044	2045340	R	protein of unknown function UPF0120 family protein; uncharacterized protein	complement(join(2043044..2043058,2043075..2043425,2043589..2043672,2043775..2045340))	Theileria orientalis strain Shintoku	20713714
TOT_010000848	CDS	TOT_010000848	NC_025260.1	2045456	2046756	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(2045456..2046133,2046164..2046395,2046551..2046683,2046714..2046756))	Theileria orientalis strain Shintoku	20713715
TOT_010000849	CDS	TOT_010000849	NC_025260.1	2046969	2049847	R	conserved hypothetical protein	complement(join(2046969..2047163,2047194..2047517,2047584..2047931,2048237..2048419,2048452..2049645,2049707..2049847))	Theileria orientalis strain Shintoku	20713716
TOT_010000850	CDS	TOT_010000850	NC_025260.1	2050575	2050946	D	conserved hypothetical protein	join(2050575..2050689,2050732..2050946)	Theileria orientalis strain Shintoku	20713717
TOT_010000851	CDS	TOT_010000851	NC_025260.1	2050956	2053787	D	synaptojanin, N-terminal domain containing protein; uncharacterized protein	join(2050956..2052124,2052197..2053787)	Theileria orientalis strain Shintoku	20713718
TOT_010000852	CDS	TOT_010000852	NC_025260.1	2054177	2056505	R	sexual stage antigen s4845 family protein; uncharacterized protein	complement(join(2054177..2054235,2054327..2054591,2054623..2054718,2054750..2055526,2055549..2055941,2056281..2056505))	Theileria orientalis strain Shintoku	20713719
TOT_010001308	CDS	TOT_010001308	NC_025260.1	2056746	2057593	R	exosome complex exonuclease	complement(join(2056746..2056915,2056964..2057302,2057335..2057593))	Theileria orientalis strain Shintoku	20714107
TOT_010001309	CDS	TOT_010001309	NC_025260.1	2057687	2058662	R	proteasome subunit beta type	complement(join(2057687..2057961,2057991..2058434,2058521..2058662))	Theileria orientalis strain Shintoku	20714108
TOT_010000855	CDS	TOT_010000855	NC_025260.1	2058728	2059350	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(2058728..2058835,2058869..2058936,2058975..2059350)	Theileria orientalis strain Shintoku	20713720
TOT_010001310	CDS	TOT_010001310	NC_025260.1	2059549	2062426	D	conserved hypothetical protein	join(2059549..2060381,2060413..2060497,2060575..2060722,2060894..2061184,2061361..2061540,2061565..2061695,2061749..2062426)	Theileria orientalis strain Shintoku	20714109
TOT_010000857	CDS	TOT_010000857	NC_025260.1	2062765	2063190	D	conserved hypothetical protein	2062765..2063190	Theileria orientalis strain Shintoku	20713721
TOT_010001311	CDS	TOT_010001311	NC_025260.1	2063231	2063646	D	conserved hypothetical protein	join(2063231..2063548,2063581..2063646)	Theileria orientalis strain Shintoku	20714110
TOT_010000859	CDS	TOT_010000859	NC_025260.1	2063823	2064510	D	conserved hypothetical protein	join(2063823..2064239,2064391..2064510)	Theileria orientalis strain Shintoku	20713722
TOT_010000860	CDS	TOT_010000860	NC_025260.1	2064675	2065550	D	conserved hypothetical protein	join(2064675..2065022,2065053..2065198,2065316..2065550)	Theileria orientalis strain Shintoku	20713723
TOT_010000861	CDS	TOT_010000861	NC_025260.1	2065699	2066752	R	conserved hypothetical protein	complement(join(2065699..2065801,2065843..2065918,2066307..2066328,2066362..2066491,2066532..2066591,2066625..2066752))	Theileria orientalis strain Shintoku	20713724
TOT_010000862	CDS	TOT_010000862	NC_025260.1	2066964	2067377	D	RNase P, Rpr2/Rpp21 subunit family protein; uncharacterized protein	2066964..2067377	Theileria orientalis strain Shintoku	20713725
TOT_010000863	CDS	TOT_010000863	NC_025260.1	2067643	2069454	D	conserved hypothetical protein	join(2067643..2069345,2069403..2069454)	Theileria orientalis strain Shintoku	20713726
TOT_010000864	CDS	TOT_010000864	NC_025260.1	2069513	2073388	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(2069513..2072796,2073019..2073388))	Theileria orientalis strain Shintoku	20713727
TOT_010000865	CDS	TOT_010000865	NC_025260.1	2073709	2077513	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(2073709..2073728,2073813..2074524,2074726..2074824,2074857..2075110,2075165..2075441,2075657..2077513))	Theileria orientalis strain Shintoku	20713728
TOT_010000866	CDS	TOT_010000866	NC_025260.1	2077663	2084989	D	P-type ATPase	join(2077663..2077884,2077921..2078145,2078202..2079172,2079207..2079275,2079545..2079938,2080042..2081589,2081656..2081715,2081905..2082085,2082156..2082354,2082405..2082499,2082543..2082614,2082851..2083275,2083321..2083584,2083684..2083803,2083844..2083914,2083949..2084134,2084278..2084411,2084513..2084570,2084602..2084727,2084758..2084989)	Theileria orientalis strain Shintoku	20713729
TOT_010000867	CDS	TOT_010000867	NC_025260.1	2085140	2086754	D	DEAD-box family RNA helicase	join(2085140..2085268,2085330..2085369,2085410..2085552,2085584..2085672,2085703..2085892,2085972..2086210,2086243..2086375,2086547..2086593,2086640..2086754)	Theileria orientalis strain Shintoku	20713730
TOT_010000868	CDS	TOT_010000868	NC_025260.1	2086701	2087147	R	DEAD-box family RNA helicase	complement(join(2086701..2086902,2087035..2087147))	Theileria orientalis strain Shintoku	20713731
TOT_010000869	CDS	TOT_010000869	NC_025260.1	2087181	2087738	R	60S ribosomal protein L31	complement(join(2087181..2087378,2087446..2087594,2087729..2087738))	Theileria orientalis strain Shintoku	20713732
TOT_010000870	CDS	TOT_010000870	NC_025260.1	2088341	2090491	D	protein kinase, core domain containing protein; uncharacterized protein	join(2088341..2088707,2088742..2089045,2089091..2089229,2089261..2089446,2089510..2089682,2089788..2090151,2090189..2090491)	Theileria orientalis strain Shintoku	20713733
TOT_010001312	CDS	TOT_010001312	NC_025260.1	2090733	2091128	R	actin depolymerizing factor	complement(join(2090733..2090896,2090930..2091128))	Theileria orientalis strain Shintoku	20714111
TOT_010000872	CDS	TOT_010000872	NC_025260.1	2091669	2091812	D	hypothetical protein	2091669..2091812	Theileria orientalis strain Shintoku	20713734
TOT_010000873	CDS	TOT_010000873	NC_025260.1	2091958	2092242	R	hypothetical protein	complement(join(2091958..2091994,2092025..2092156,2092226..2092242))	Theileria orientalis strain Shintoku	20713735
TOT_010001313	CDS	TOT_010001313	NC_025260.1	2092405	2093263	R	prefoldin subunit 3	complement(join(2092405..2092527,2092641..2092730,2092761..2092865,2092897..2093008,2093039..2093109,2093198..2093263))	Theileria orientalis strain Shintoku	20714112
TOT_010000875	CDS	TOT_010000875	NC_025260.1	2093780	2094338	D	vesicular cargo protein	join(2093780..2093944,2094105..2094338)	Theileria orientalis strain Shintoku	20713736
TOT_010001314	CDS	TOT_010001314	NC_025260.1	2094406	2095038	R	ATP synthase subunit delta	complement(2094406..2095038)	Theileria orientalis strain Shintoku	20714113
TOT_010000877	CDS	TOT_010000877	NC_025260.1	2095945	2099501	D	metastasis-associated protein MTA2	join(2095945..2097460,2097611..2097900,2098266..2098315,2098329..2098484,2098533..2098611,2098840..2099147,2099381..2099501)	Theileria orientalis strain Shintoku	20713737
TOT_010000878	CDS	TOT_010000878	NC_025260.1	2099537	2102195	D	conserved hypothetical protein	join(2099537..2099873,2099965..2100454,2100484..2100589,2100620..2100751,2100881..2101626,2101838..2102195)	Theileria orientalis strain Shintoku	20713738
TOT_010001315	CDS	TOT_010001315	NC_025260.1	2102465	2107111	R	conserved hypothetical protein	complement(join(2102465..2103047,2103288..2103961,2104079..2104570,2104994..2105571,2105725..2107111))	Theileria orientalis strain Shintoku	20714114
TOT_010000880	CDS	TOT_010000880	NC_025260.1	2107204	2107444	D	hypothetical protein	join(2107204..2107208,2107264..2107444)	Theileria orientalis strain Shintoku	20713739
TOT_010001316	CDS	TOT_010001316	NC_025260.1	2107592	2110882	R	molecular chaperone protein	complement(join(2107592..2108398,2108432..2110882))	Theileria orientalis strain Shintoku	20714115
TOT_010001317	CDS	TOT_010001317	NC_025260.1	2111288	2112781	D	fumble domain containing protein; uncharacterized protein	join(2111288..2111515,2111600..2112283,2112422..2112519,2112628..2112781)	Theileria orientalis strain Shintoku	20714116
TOT_010001318	CDS	TOT_010001318	NC_025260.1	2113171	2114946	D	conserved hypothetical protein	join(2113171..2113296,2113329..2113424,2113459..2113523,2113565..2113652,2113685..2113860,2113891..2113963,2113994..2114070,2114094..2114183,2114226..2114465,2114496..2114946)	Theileria orientalis strain Shintoku	20714117
TOT_010001319	CDS	TOT_010001319	NC_025260.1	2115418	2119107	D	SWI/SNF family transcriptional activator protein	join(2115418..2116156,2116329..2116801,2116993..2117952,2118123..2118274,2118406..2118598,2118728..2118860,2118959..2119107)	Theileria orientalis strain Shintoku	20714118
TOT_010000885	CDS	TOT_010000885	NC_025260.1	2119455	2120459	D	conserved hypothetical protein	2119455..2120459	Theileria orientalis strain Shintoku	20713740
TOT_010000886	CDS	TOT_010000886	NC_025260.1	2120742	2123823	R	transitional endoplasmic reticulum ATPase	complement(join(2120742..2121520,2121609..2121668,2121780..2121848,2122036..2122854,2123040..2123823))	Theileria orientalis strain Shintoku	20713741
TOT_010000887	CDS	TOT_010000887	NC_025260.1	2125018	2127346	D	cyclin-like F-box domain containing protein; uncharacterized protein	join(2125018..2125437,2125519..2126653,2126873..2127003,2127311..2127346)	Theileria orientalis strain Shintoku	20713742
TOT_010000888	CDS	TOT_010000888	NC_025260.1	2127496	2128425	D	conserved hypothetical protein	2127496..2128425	Theileria orientalis strain Shintoku	20713743
TOT_010000889	CDS	TOT_010000889	NC_025260.1	2128542	2129134	D	Like-Sm ribonucleoprotein, core family protein; uncharacterized protein	join(2128542..2128752,2128857..2129134)	Theileria orientalis strain Shintoku	20713744
TOT_010000890	CDS	TOT_010000890	NC_025260.1	2129467	2131873	D	conserved hypothetical protein	join(2129467..2129532,2129601..2129744,2129778..2129818,2129906..2131272,2131337..2131416,2131554..2131648,2131771..2131873)	Theileria orientalis strain Shintoku	20713745
TOT_010001320	CDS	TOT_010001320	NC_025260.1	2132200	2133982	R	choline/ethanolamine kinase	complement(join(2132200..2132312,2132623..2132826,2132857..2132940,2133010..2133109,2133164..2133286,2133364..2133510,2133541..2133641,2133721..2133982))	Theileria orientalis strain Shintoku	20714119
TOT_010000892	CDS	TOT_010000892	NC_025260.1	2134260	2135971	R	protein kinase	complement(join(2134260..2134349,2134685..2134804,2134910..2135041,2135073..2135218,2135336..2135470,2135503..2135596,2135637..2135709,2135765..2135868,2135951..2135971))	Theileria orientalis strain Shintoku	20713746
TOT_010001321	CDS	TOT_010001321	NC_025260.1	2136450	2137695	R	conserved hypothetical protein	complement(join(2136450..2136907,2136966..2137695))	Theileria orientalis strain Shintoku	20714120
TOT_010000894	CDS	TOT_010000894	NC_025260.1	2138658	2140628	R	polyadenylate-binding protein	complement(2138658..2140628)	Theileria orientalis strain Shintoku	20713747
TOT_010000895	CDS	TOT_010000895	NC_025260.1	2141154	2142343	D	ribosome biogenesis regulatory protein	join(2141154..2141185,2141203..2141299,2141349..2141449,2141539..2141717,2141749..2141886,2141940..2142013,2142076..2142143,2142199..2142343)	Theileria orientalis strain Shintoku	20713748
TOT_010000896	CDS	TOT_010000896	NC_025260.1	2142551	2143407	D	co-chaperone protein	join(2142551..2142859,2142955..2143407)	Theileria orientalis strain Shintoku	20713749
TOT_010000897	CDS	TOT_010000897	NC_025260.1	2143539	2144370	R	conserved hypothetical protein	complement(join(2143539..2144013,2144129..2144370))	Theileria orientalis strain Shintoku	20713750
TOT_010000898	CDS	TOT_010000898	NC_025260.1	2144778	2145155	D	small ribonucleoprotein D1	2144778..2145155	Theileria orientalis strain Shintoku	20713751
TOT_010001322	CDS	TOT_010001322	NC_025260.1	2145575	2147164	D	mitochondrial inner membrane subunit	join(2145575..2145914,2145946..2146060,2146133..2146293,2146401..2146576,2146705..2146816,2146917..2147015,2147058..2147164)	Theileria orientalis strain Shintoku	20714121
TOT_010000900	CDS	TOT_010000900	NC_025260.1	2147423	2148064	R	mitochondrial import inner membrane translocase Tim17 subunit	complement(join(2147423..2147465,2147537..2147633,2147695..2148064))	Theileria orientalis strain Shintoku	20713752
TOT_010000901	CDS	TOT_010000901	NC_025260.1	2148531	2153731	D	conserved hypothetical protein	join(2148531..2148689,2148719..2149541,2149812..2151527,2151630..2153583,2153674..2153731)	Theileria orientalis strain Shintoku	20713753
TOT_010001323	CDS	TOT_010001323	NC_025260.1	2153836	2155807	D	conserved hypothetical protein	join(2153836..2153905,2153979..2154418,2154467..2154746,2154780..2154859,2154938..2155004,2155035..2155211,2155289..2155438,2155499..2155579,2155611..2155685,2155737..2155807)	Theileria orientalis strain Shintoku	20714122
TOT_010001196	CDS	TOT_010001196	NC_025260.1	2155855	2156878	D	conserved hypothetical protein	join(2155855..2155976,2156014..2156097,2156241..2156334,2156364..2156452,2156487..2156547,2156578..2156620,2156700..2156878)	Theileria orientalis strain Shintoku	20713995
TOT_010001324	CDS	TOT_010001324	NC_025260.1	2157163	2158761	D	transketolase subunit	join(2157163..2157326,2157387..2157498,2157558..2157653,2157827..2158162,2158399..2158761)	Theileria orientalis strain Shintoku	20714123
TOT_010000904	CDS	TOT_010000904	NC_025260.1	2158896	2161999	R	threonyl-tRNA synthetase	complement(join(2158896..2158992,2159134..2159773,2159978..2160413,2160448..2160509,2160555..2161011,2161081..2161356,2161388..2161530,2161562..2161798,2161831..2161999))	Theileria orientalis strain Shintoku	20713754
TOT_010000905	CDS	TOT_010000905	NC_025260.1	2162116	2164514	R	autophagy protein	complement(join(2162116..2162360,2162392..2162744,2162788..2162923,2162955..2163045,2163127..2163208,2163250..2164514))	Theileria orientalis strain Shintoku	20713755
TOT_010001325	CDS	TOT_010001325	NC_025260.1	2164580	2168130	R	PLU-1-like domain containing protein; uncharacterized protein	complement(join(2164580..2165571,2165977..2166433,2166602..2167807,2167843..2168130))	Theileria orientalis strain Shintoku	20714124
TOT_010000907	CDS	TOT_010000907	NC_025260.1	2168364	2169776	R	EGF-like region domain containing protein; uncharacterized protein	complement(2168364..2169776)	Theileria orientalis strain Shintoku	20713756
TOT_010000908	CDS	TOT_010000908	NC_025260.1	2170127	2171329	R	growth factor, receptor domain containing protein; uncharacterized protein	complement(2170127..2171329)	Theileria orientalis strain Shintoku	20713757
TOT_010001326	CDS	TOT_010001326	NC_025260.1	2171686	2174517	R	ABC transporter related domain containing protein; uncharacterized protein	complement(join(2171686..2173103,2173245..2174517))	Theileria orientalis strain Shintoku	20714125
TOT_010000910	CDS	TOT_010000910	NC_025260.1	2174981	2176870	D	vacuolar protein sorting 36 family protein; uncharacterized protein	join(2174981..2175085,2175142..2175468,2175500..2175678,2175871..2176870)	Theileria orientalis strain Shintoku	20713758
TOT_010000911	CDS	TOT_010000911	NC_025260.1	2177252	2177474	R	conserved hypothetical protein	complement(join(2177252..2177301,2177333..2177474))	Theileria orientalis strain Shintoku	20713759
TOT_010000912	CDS	TOT_010000912	NC_025260.1	2177591	2178260	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(2177591..2177746,2177886..2178260)	Theileria orientalis strain Shintoku	20713760
TOT_010000913	CDS	TOT_010000913	NC_025260.1	2178714	2179128	D	60S ribosomal protein L35	join(2178714..2178716,2178760..2179128)	Theileria orientalis strain Shintoku	20713761
TOT_010000914	CDS	TOT_010000914	NC_025260.1	2179361	2180697	D	phosphoglycerate kinase	join(2179361..2179411,2179498..2180697)	Theileria orientalis strain Shintoku	20713762
TOT_010000915	CDS	TOT_010000915	NC_025260.1	2180904	2181311	R	conserved hypothetical protein	complement(2180904..2181311)	Theileria orientalis strain Shintoku	20713763
TOT_010000916	CDS	TOT_010000916	NC_025260.1	2181594	2184068	D	conserved hypothetical protein	2181594..2184068	Theileria orientalis strain Shintoku	20713764
TOT_010000917	CDS	TOT_010000917	NC_025260.1	2184140	2184427	D	hypothetical protein	join(2184140..2184221,2184324..2184427)	Theileria orientalis strain Shintoku	20713765
TOT_010000918	CDS	TOT_010000918	NC_025260.1	2184465	2185970	D	conserved hypothetical protein	2184465..2185970	Theileria orientalis strain Shintoku	20713766
TOT_010000919	CDS	TOT_010000919	NC_025260.1	2186434	2187401	R	7,8 dihydro-8-oxoguanine DNA glycosylase	complement(join(2186434..2186512,2186548..2186646,2186679..2187149,2187181..2187283,2187314..2187401))	Theileria orientalis strain Shintoku	20713767
TOT_010000920	CDS	TOT_010000920	NC_025260.1	2187468	2188286	R	conserved hypothetical protein	complement(2187468..2188286)	Theileria orientalis strain Shintoku	20713768
TOT_010000921	CDS	TOT_010000921	NC_025260.1	2188760	2189180	D	adaptor protein ClpS, core domain containing protein; uncharacterized protein	join(2188760..2188830,2188865..2188972,2189003..2189180)	Theileria orientalis strain Shintoku	20713769
TOT_010000922	CDS	TOT_010000922	NC_025260.1	2189333	2189866	R	mitochondrial membrane protease, subunit 2	complement(join(2189333..2189436,2189474..2189720,2189762..2189866))	Theileria orientalis strain Shintoku	20713770
TOT_010001327	CDS	TOT_010001327	NC_025260.1	2190276	2190837	D	conserved hypothetical protein	join(2190276..2190297,2190330..2190575,2190609..2190667,2190700..2190837)	Theileria orientalis strain Shintoku	20714126
TOT_010000924	CDS	TOT_010000924	NC_025260.1	2191202	2192194	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(2191202..2192194)	Theileria orientalis strain Shintoku	20713771
TOT_010001328	CDS	TOT_010001328	NC_025260.1	2192667	2195498	R	conserved hypothetical protein	complement(join(2192667..2192721,2192793..2192940,2193083..2193298,2193566..2194169,2194335..2194816,2194885..2195048,2195080..2195498))	Theileria orientalis strain Shintoku	20714127
TOT_010000926	CDS	TOT_010000926	NC_025260.1	2196503	2196751	D	conserved hypothetical protein	2196503..2196751	Theileria orientalis strain Shintoku	20713772
TOT_010000927	CDS	TOT_010000927	NC_025260.1	2196767	2197610	R	conserved hypothetical protein	complement(join(2196767..2196963,2196993..2197078,2197109..2197287,2197319..2197423,2197530..2197610))	Theileria orientalis strain Shintoku	20713773
TOT_010001329	CDS	TOT_010001329	NC_025260.1	2198037	2202170	R	DNA-directed RNA polymerase precursor	complement(join(2198037..2198810,2199075..2199798,2200003..2202170))	Theileria orientalis strain Shintoku	20714128
TOT_010000929	CDS	TOT_010000929	NC_025260.1	2202330	2204661	D	conserved hypothetical protein	join(2202330..2202643,2202726..2202833,2202865..2203010,2203040..2203390,2203420..2203604,2203775..2203942,2204013..2204098,2204254..2204382,2204491..2204560,2204596..2204661)	Theileria orientalis strain Shintoku	20713774
TOT_010000930	CDS	TOT_010000930	NC_025260.1	2204853	2205535	R	ubiquitin domain containing protein; uncharacterized protein	complement(join(2204853..2205055,2205094..2205234,2205302..2205373,2205475..2205535))	Theileria orientalis strain Shintoku	20713775
TOT_010001330	CDS	TOT_010001330	NC_025260.1	2205570	2207218	R	replication factor C subunit	complement(join(2205570..2205646,2205686..2205782,2205814..2205876,2205906..2205965,2206024..2206080,2206182..2206244,2206280..2206538,2206650..2206731,2206790..2206845,2206955..2207034,2207102..2207218))	Theileria orientalis strain Shintoku	20714129
TOT_010000932	CDS	TOT_010000932	NC_025260.1	2207402	2207854	D	conserved hypothetical protein	join(2207402..2207524,2207558..2207606,2207703..2207759,2207790..2207854)	Theileria orientalis strain Shintoku	20713776
TOT_010000933	CDS	TOT_010000933	NC_025260.1	2208021	2208426	R	ribosomal protein S26e	complement(join(2208021..2208184,2208246..2208426))	Theileria orientalis strain Shintoku	20713777
TOT_010000934	CDS	TOT_010000934	NC_025260.1	2208892	2209659	D	conserved hypothetical protein	join(2208892..2208952,2209014..2209109,2209201..2209276,2209413..2209659)	Theileria orientalis strain Shintoku	20713778
TOT_010000935	CDS	TOT_010000935	NC_025260.1	2210069	2213518	D	conserved hypothetical protein	join(2210069..2212162,2212622..2212993,2213258..2213518)	Theileria orientalis strain Shintoku	20713779
TOT_010000936	CDS	TOT_010000936	NC_025260.1	2213749	2215836	R	calmodulin-domain protein kinase	complement(join(2213749..2213874,2214032..2214150,2214287..2214395,2214432..2214865,2214928..2215022,2215089..2215617,2215719..2215836))	Theileria orientalis strain Shintoku	20713780
TOT_010000937	CDS	TOT_010000937	NC_025260.1	2216130	2217480	D	thrombospondin, type I repeat containing protein	join(2216130..2216722,2216767..2217109,2217141..2217321,2217353..2217480)	Theileria orientalis strain Shintoku	20713781
TOT_010000938	CDS	TOT_010000938	NC_025260.1	2217512	2219381	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(2217512..2217654,2217685..2217799,2217950..2218116,2218154..2218285,2218320..2218426,2218469..2218532,2218576..2218684,2218825..2218944,2219058..2219114,2219145..2219381)	Theileria orientalis strain Shintoku	20713782
TOT_010000939	CDS	TOT_010000939	NC_025260.1	2220247	2223480	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	2220247..2223480	Theileria orientalis strain Shintoku	20713783
TOT_010000940	CDS	TOT_010000940	NC_025260.1	2223889	2226064	D	transcription factor IIH subunit	join(2223889..2224672,2224847..2225900,2225998..2226064)	Theileria orientalis strain Shintoku	20713784
TOT_010000941	CDS	TOT_010000941	NC_025260.1	2226121	2227173	R	conserved hypothetical protein	complement(join(2226121..2226480,2226635..2226829,2226870..2226956,2227096..2227173))	Theileria orientalis strain Shintoku	20713785
TOT_010000942	CDS	TOT_010000942	NC_025260.1	2227723	2228792	D	longin-like domain containing protein; uncharacterized protein	join(2227723..2227949,2228113..2228302,2228336..2228461,2228562..2228674,2228753..2228792)	Theileria orientalis strain Shintoku	20713786
TOT_010000943	CDS	TOT_010000943	NC_025260.1	2228862	2229234	D	Os02g0510100 protein; uncharacterized protein	join(2228862..2228949,2229015..2229128,2229197..2229234)	Theileria orientalis strain Shintoku	20713787
TOT_010001331	CDS	TOT_010001331	NC_025260.1	2229388	2230460	R	phosphoribosyl pyrophosphate synthetase	complement(join(2229388..2229996,2230098..2230460))	Theileria orientalis strain Shintoku	20714130
TOT_010001332	CDS	TOT_010001332	NC_025260.1	2230860	2231612	R	conserved hypothetical protein	complement(2230860..2231612)	Theileria orientalis strain Shintoku	20714131
TOT_010000946	CDS	TOT_010000946	NC_025260.1	2231734	2232302	D	hypothetical protein	join(2231734..2231746,2231779..2231841,2231913..2232116,2232253..2232302)	Theileria orientalis strain Shintoku	20713788
TOT_010000947	CDS	TOT_010000947	NC_025260.1	2232339	2233025	R	DNA repair protein	complement(join(2232339..2232631,2232691..2232899,2232952..2233025))	Theileria orientalis strain Shintoku	20713789
TOT_010000948	CDS	TOT_010000948	NC_025260.1	2233207	2234484	D	conserved hypothetical protein	join(2233207..2233296,2233328..2233493,2233536..2233608,2233657..2233754,2233810..2233877,2233908..2234190,2234357..2234484)	Theileria orientalis strain Shintoku	20713790
TOT_010000949	CDS	TOT_010000949	NC_025260.1	2234843	2236943	R	conserved hypothetical protein	complement(join(2234843..2235104,2235144..2235264,2235424..2236476,2236509..2236611,2236680..2236943))	Theileria orientalis strain Shintoku	20713791
TOT_010001333	CDS	TOT_010001333	NC_025260.1	2237357	2239660	D	conserved hypothetical protein	join(2237357..2237921,2237976..2239234,2239319..2239660)	Theileria orientalis strain Shintoku	20714132
TOT_010000951	CDS	TOT_010000951	NC_025260.1	2239890	2242014	R	protein of unknown function DUF814 domain containing protein; uncharacterized protein	complement(join(2239890..2240435,2240583..2240842,2241039..2242014))	Theileria orientalis strain Shintoku	20713792
TOT_010000952	CDS	TOT_010000952	NC_025260.1	2242081	2243343	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(2242081..2242188,2242241..2242690,2242729..2242816,2242852..2242954,2242995..2243145,2243179..2243343))	Theileria orientalis strain Shintoku	20713793
TOT_010000953	CDS	TOT_010000953	NC_025260.1	2243446	2246935	R	alanyl-tRNA synthetase	complement(join(2243446..2243501,2243607..2243958,2244170..2244475,2244620..2245071,2245180..2246935))	Theileria orientalis strain Shintoku	20713794
TOT_010000954	CDS	TOT_010000954	NC_025260.1	2247519	2249989	D	Vps53-like, N-terminal domain containing protein; uncharacterized protein	join(2247519..2247892,2247928..2248304,2248406..2248464,2248516..2248611,2248638..2248944,2248980..2249312,2249520..2249989)	Theileria orientalis strain Shintoku	20713795
TOT_010000955	CDS	TOT_010000955	NC_025260.1	2250448	2251650	R	NLI interacting factor domain containing protein; uncharacterized protein	complement(2250448..2251650)	Theileria orientalis strain Shintoku	20713796
TOT_010001334	CDS	TOT_010001334	NC_025260.1	2251827	2253542	R	conserved hypothetical protein	complement(2251827..2253542)	Theileria orientalis strain Shintoku	20714133
TOT_010000957	CDS	TOT_010000957	NC_025260.1	2253796	2255250	D	RNA pseudouridylate synthase	join(2253796..2253825,2253864..2254738,2254878..2255250)	Theileria orientalis strain Shintoku	20713797
TOT_010000958	CDS	TOT_010000958	NC_025260.1	2255364	2257352	D	basic helix-loop-helix, Nulp1-type family protein; uncharacterized protein	join(2255364..2255600,2255633..2255762,2255804..2255999,2256022..2256166,2256199..2256309,2256345..2256721,2256893..2257352)	Theileria orientalis strain Shintoku	20713798
TOT_010000959	CDS	TOT_010000959	NC_025260.1	2257638	2259132	R	actin	complement(join(2257638..2258774,2258863..2259132))	Theileria orientalis strain Shintoku	20713799
TOT_010000960	CDS	TOT_010000960	NC_025260.1	2259279	2260595	R	MtN3 and saliva related transmembrane protein family protein; uncharacterized protein	complement(join(2259279..2259595,2259633..2259824,2259850..2260443,2260568..2260595))	Theileria orientalis strain Shintoku	20713800
TOT_010000961	CDS	TOT_010000961	NC_025260.1	2260650	2261425	D	conserved hypothetical protein	join(2260650..2260829,2260914..2261043,2261082..2261425)	Theileria orientalis strain Shintoku	20713801
TOT_010000962	CDS	TOT_010000962	NC_025260.1	2261496	2262510	D	protein of unknown function, ATP binding family protein; uncharacterized protein	join(2261496..2261721,2261780..2261851,2261881..2261981,2262028..2262510)	Theileria orientalis strain Shintoku	20713802
TOT_010000963	CDS	TOT_010000963	NC_025260.1	2262554	2263482	D	conserved hypothetical protein	join(2262554..2262743,2262780..2262860,2262925..2262986,2263068..2263098,2263209..2263283,2263334..2263482)	Theileria orientalis strain Shintoku	20713803
TOT_010001335	CDS	TOT_010001335	NC_025260.1	2263562	2265327	R	UBA/THIF-type NAD/FAD binding fold domain containing protein; uncharacterized protein	complement(join(2263562..2264112,2264151..2264286,2264337..2264577,2264610..2264713,2264738..2264913,2264946..2265327))	Theileria orientalis strain Shintoku	20714134
TOT_010000965	CDS	TOT_010000965	NC_025260.1	2265826	2268102	D	heat shock protein DnaJ, N-terminal domain containing protein; uncharacterized protein	2265826..2268102	Theileria orientalis strain Shintoku	20713804
TOT_010000966	CDS	TOT_010000966	NC_025260.1	2268372	2270602	R	DEAD-box family helicase	complement(join(2268372..2270512,2270545..2270602))	Theileria orientalis strain Shintoku	20713805
TOT_010000967	CDS	TOT_010000967	NC_025260.1	2270778	2271899	R	conserved hypothetical protein	complement(join(2270778..2271049,2271081..2271254,2271286..2271570,2271606..2271731,2271764..2271899))	Theileria orientalis strain Shintoku	20713806
TOT_010000968	CDS	TOT_010000968	NC_025260.1	2272288	2277183	D	conserved hypothetical protein	join(2272288..2272597,2272630..2272764,2272794..2276063,2276323..2276557,2276633..2276951,2277103..2277183)	Theileria orientalis strain Shintoku	20713807
TOT_010000969	CDS	TOT_010000969	NC_025260.1	2277376	2278821	R	binding protein	complement(join(2277376..2277717,2277851..2278006,2278039..2278821))	Theileria orientalis strain Shintoku	20713808
TOT_010001336	CDS	TOT_010001336	NC_025260.1	2279032	2280004	D	60S ribosomal protein L10e	join(2279032..2279243,2279328..2279418,2279464..2279595,2279672..2279833,2279903..2280004)	Theileria orientalis strain Shintoku	20714135
TOT_010001337	CDS	TOT_010001337	NC_025260.1	2280048	2282394	D	arginyl-tRNA synthetase	join(2280048..2280152,2280396..2280496,2280529..2281582,2281657..2281882,2281918..2282094,2282126..2282394)	Theileria orientalis strain Shintoku	20714136
TOT_010000972	CDS	TOT_010000972	NC_025260.1	2282511	2283881	R	conserved hypothetical protein	complement(join(2282511..2282737,2282891..2283881))	Theileria orientalis strain Shintoku	20713809
TOT_010000973	CDS	TOT_010000973	NC_025260.1	2284317	2285936	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(2284317..2284632,2284673..2285631,2285742..2285936))	Theileria orientalis strain Shintoku	20713810
TOT_010001338	CDS	TOT_010001338	NC_025260.1	2286493	2286804	D	protein kinase	join(2286493..2286555,2286589..2286804)	Theileria orientalis strain Shintoku	20714137
TOT_010000975	CDS	TOT_010000975	NC_025260.1	2288171	2295639	D	Bromodomain containing protein; uncharacterized protein	join(2288171..2293045,2293193..2293634,2293953..2294293,2294328..2295073,2295105..2295639)	Theileria orientalis strain Shintoku	20713811
TOT_010000976	CDS	TOT_010000976	NC_025260.1	2295677	2296966	D	AAR2 family protein; uncharacterized protein	join(2295677..2295842,2295879..2296966)	Theileria orientalis strain Shintoku	20713812
TOT_010000977	CDS	TOT_010000977	NC_025260.1	2297140	2297835	D	nucleolar phosphoprotein	join(2297140..2297286,2297328..2297480,2297551..2297835)	Theileria orientalis strain Shintoku	20713813
TOT_010000978	CDS	TOT_010000978	NC_025260.1	2297977	2300212	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(2297977..2298203,2298262..2298446,2298476..2298940,2298972..2299296,2299514..2299841,2299955..2300212)	Theileria orientalis strain Shintoku	20713814
TOT_010001339	CDS	TOT_010001339	NC_025260.1	2300207	2301295	R	SANT, DNA-binding domain containing protein; uncharacterized protein	complement(2300207..2301295)	Theileria orientalis strain Shintoku	20714138
TOT_010000980	CDS	TOT_010000980	NC_025260.1	2301568	2303345	D	RAP domain containing protein; uncharacterized protein	join(2301568..2303105,2303168..2303345)	Theileria orientalis strain Shintoku	20713815
TOT_010001340	CDS	TOT_010001340	NC_025260.1	2303362	2303660	R	conserved hypothetical protein	complement(join(2303362..2303434,2303464..2303660))	Theileria orientalis strain Shintoku	20714139
TOT_010000982	CDS	TOT_010000982	NC_025260.1	2303738	2305469	R	conserved hypothetical protein	complement(join(2303738..2303836,2303887..2304012,2304042..2304178,2304407..2304665,2304727..2304813,2304932..2305221,2305259..2305469))	Theileria orientalis strain Shintoku	20713816
TOT_010000983	CDS	TOT_010000983	NC_025260.1	2305795	2311704	D	conserved hypothetical protein	join(2305795..2307582,2307718..2309593,2309672..2310085,2310332..2311281,2311450..2311704)	Theileria orientalis strain Shintoku	20713817
TOT_010001341	CDS	TOT_010001341	NC_025260.1	2311983	2312344	D	ubiquitin-like protein	join(2311983..2312063,2312096..2312192,2312229..2312344)	Theileria orientalis strain Shintoku	20714140
TOT_010001342	CDS	TOT_010001342	NC_025260.1	2313050	2313623	D	ATP-dependent Clp protease proteolytic subunit	join(2313050..2313208,2313241..2313458,2313491..2313623)	Theileria orientalis strain Shintoku	20714141
TOT_010001343	CDS	TOT_010001343	NC_025260.1	2314016	2322694	D	GCC2 and GCC3 domain containing protein; uncharacterized protein	join(2314016..2314162,2314189..2314456,2314489..2314728,2314769..2314993,2315026..2315442,2315469..2315855,2315890..2319862,2320040..2321428,2321575..2322694)	Theileria orientalis strain Shintoku	20714142
TOT_010000987	CDS	TOT_010000987	NC_025260.1	2322743	2331311	R	GCC2 and GCC3 domain containing protein; uncharacterized protein	complement(join(2322743..2323267,2323319..2323976,2324123..2324800,2324882..2325333,2325496..2325511,2325707..2326442,2326659..2327179,2327210..2327318,2327409..2328213,2328245..2329458,2329495..2329810,2329844..2330196,2330229..2330378,2330408..2330542,2330573..2330902,2330935..2331018,2331296..2331311))	Theileria orientalis strain Shintoku	20713818
TOT_010000988	CDS	TOT_010000988	NC_025260.1	2331885	2334291	D	GTP-binding protein LepA family protein; uncharacterized protein	join(2331885..2332281,2332314..2332464,2332499..2332667,2332698..2332785,2332817..2332953,2332986..2333107,2333142..2333219,2333316..2333720,2333756..2334045,2334080..2334291)	Theileria orientalis strain Shintoku	20713819
TOT_010000989	CDS	TOT_010000989	NC_025260.1	2334754	2336332	D	porin	join(2334754..2335049,2335082..2335333,2335364..2335506,2335616..2335692,2335734..2335800,2335939..2336096,2336129..2336332)	Theileria orientalis strain Shintoku	20713820
TOT_010000990	CDS	TOT_010000990	NC_025260.1	2336519	2337131	R	thioredoxin-like fold domain containing protein; uncharacterized protein	complement(join(2336519..2336693,2336725..2337131))	Theileria orientalis strain Shintoku	20713821
TOT_010000991	CDS	TOT_010000991	NC_025260.1	2337518	2341409	D	patatin-family phospholipase	join(2337518..2338741,2338829..2339564,2339632..2339731,2339855..2339905,2339939..2340369,2340626..2340704,2340789..2340942,2341089..2341409)	Theileria orientalis strain Shintoku	20713822
TOT_010000992	CDS	TOT_010000992	NC_025260.1	2341603	2345568	R	aconitate hydratase 3, mitochondrial precursor	complement(join(2341603..2341665,2341867..2342122,2342409..2342748,2342931..2343519,2343658..2343833,2343909..2344617,2344776..2345046,2345106..2345210,2345333..2345568))	Theileria orientalis strain Shintoku	20713823
TOT_010000993	CDS	TOT_010000993	NC_025260.1	2346148	2347047	R	60S ribosomal protein L2/L8	complement(join(2346148..2346905,2347029..2347047))	Theileria orientalis strain Shintoku	20713824
TOT_010000994	CDS	TOT_010000994	NC_025260.1	2347572	2348596	R	3' exonuclease, exosome component	complement(join(2347572..2347724,2347763..2347888,2347967..2348023,2348074..2348450,2348533..2348596))	Theileria orientalis strain Shintoku	20713825
TOT_010000995	CDS	TOT_010000995	NC_025260.1	2348666	2351006	R	hypothetical protein	complement(join(2348666..2349281,2349359..2349414,2349450..2349518,2349557..2349670,2349774..2351006))	Theileria orientalis strain Shintoku	20713826
TOT_010001344	CDS	TOT_010001344	NC_025260.1	2351675	2354145	D	glutamyl-tRNA synthetase	join(2351675..2352114,2352145..2352221,2352249..2352489,2352529..2352683,2352725..2352849,2352881..2353717,2353797..2354078,2354110..2354145)	Theileria orientalis strain Shintoku	20714143
TOT_010001345	CDS	TOT_010001345	NC_025260.1	2354502	2357001	D	conserved hypothetical protein	join(2354502..2354855,2354934..2355924,2356064..2356287,2356408..2357001)	Theileria orientalis strain Shintoku	20714144
TOT_010000998	CDS	TOT_010000998	NC_025260.1	2357407	2359284	R	conserved hypothetical protein	complement(join(2357407..2357439,2357521..2357588,2357621..2357709,2357741..2357847,2357879..2358265,2358298..2358527,2358653..2358716,2358748..2358912,2359141..2359284))	Theileria orientalis strain Shintoku	20713827
TOT_010000999	CDS	TOT_010000999	NC_025260.1	2359844	2360695	D	major piroplasm surface protein	2359844..2360695	Theileria orientalis strain Shintoku	20713828
TOT_010001000	CDS	TOT_010001000	NC_025260.1	2360924	2361519	R	conserved hypothetical protein	complement(join(2360924..2361018,2361045..2361519))	Theileria orientalis strain Shintoku	20713829
TOT_010001001	CDS	TOT_010001001	NC_025260.1	2361835	2363852	R	conserved hypothetical protein	complement(join(2361835..2362519,2362592..2363362,2363403..2363514,2363741..2363852))	Theileria orientalis strain Shintoku	20713830
TOT_010001002	CDS	TOT_010001002	NC_025260.1	2364322	2367024	R	CDC5-like	complement(join(2364322..2364545,2364577..2364794,2364827..2364903,2364975..2365413,2365550..2365662,2365695..2365781,2365814..2365957,2365991..2366183,2366241..2366614,2366649..2366835,2366879..2367024))	Theileria orientalis strain Shintoku	20713831
TOT_010001003	CDS	TOT_010001003	NC_025260.1	2367323	2368866	R	RAP domain containing protein; uncharacterized protein	complement(join(2367323..2367373,2367415..2367564,2367595..2367693,2367725..2367847,2367889..2367977,2368008..2368179,2368220..2368513,2368547..2368672,2368714..2368866))	Theileria orientalis strain Shintoku	20713832
TOT_010001346	CDS	TOT_010001346	NC_025260.1	2368987	2370601	D	conserved hypothetical protein	join(2368987..2369112,2369172..2369422,2369460..2369574,2369604..2369671,2369705..2369873,2369964..2370096,2370129..2370601)	Theileria orientalis strain Shintoku	20714145
TOT_010001347	CDS	TOT_010001347	NC_025260.1	2370988	2372341	R	replication factor C subunit	complement(join(2370988..2371164,2371269..2371338,2371370..2371608,2371640..2371702,2371732..2371850,2371885..2371998,2372031..2372103,2372141..2372341))	Theileria orientalis strain Shintoku	20714146
TOT_010001006	CDS	TOT_010001006	NC_025260.1	2372413	2373737	R	WW/Rsp5/WWP domain containing protein; uncharacterized protein	complement(join(2372413..2372467,2372596..2372711,2372749..2372835,2372865..2373365,2373398..2373544,2373582..2373639,2373670..2373737))	Theileria orientalis strain Shintoku	20713833
TOT_010001007	CDS	TOT_010001007	NC_025260.1	2374397	2376715	R	conserved hypothetical protein	complement(2374397..2376715)	Theileria orientalis strain Shintoku	20713834
TOT_010001008	CDS	TOT_010001008	NC_025260.1	2376876	2379704	R	haem peroxidase family protein; uncharacterized protein	complement(2376876..2379704)	Theileria orientalis strain Shintoku	20713835
TOT_010001009	CDS	TOT_010001009	NC_025260.1	2380243	2382352	R	predicted protein	complement(join(2380243..2380500,2380532..2380688,2380721..2380848,2380916..2380981,2381013..2381205,2381317..2381435,2381466..2381610,2381643..2382352))	Theileria orientalis strain Shintoku	20713836
TOT_010001010	CDS	TOT_010001010	NC_025260.1	2382823	2384057	D	conserved hypothetical protein	join(2382823..2382897,2382942..2383307,2383488..2384057)	Theileria orientalis strain Shintoku	20713837
TOT_010001011	CDS	TOT_010001011	NC_025260.1	2384250	2386509	R	HR1 rho-binding repeat containing protein	complement(join(2384250..2384405,2384497..2384673,2384756..2385047,2385080..2385648,2385679..2386509))	Theileria orientalis strain Shintoku	20713838
TOT_010001012	CDS	TOT_010001012	NC_025260.1	2386825	2388140	D	DnaJ-like molecular chaperone	join(2386825..2386930,2386967..2387118,2387148..2387250,2387281..2387402,2387451..2387570,2387604..2387763,2387865..2388010,2388048..2388140)	Theileria orientalis strain Shintoku	20713839
TOT_010001013	CDS	TOT_010001013	NC_025260.1	2389020	2390136	D	SNARE associated Golgi protein domain containing protein; uncharacterized protein	join(2389020..2389101,2389137..2389345,2389376..2389508,2389547..2390136)	Theileria orientalis strain Shintoku	20713840
TOT_010001014	CDS	TOT_010001014	NC_025260.1	2390692	2391804	R	hexose transporter	complement(2390692..2391804)	Theileria orientalis strain Shintoku	20713841
TOT_010001015	CDS	TOT_010001015	NC_025260.1	2392477	2392629	D	hypothetical protein	2392477..2392629	Theileria orientalis strain Shintoku	20713842
TOT_010001016	CDS	TOT_010001016	NC_025260.1	2393097	2393492	R	Ubc protein	complement(2393097..2393492)	Theileria orientalis strain Shintoku	20713843
TOT_010001017	CDS	TOT_010001017	NC_025260.1	2393879	2395395	D	transcription factor TFIIE	join(2393879..2394088,2394107..2394444,2394524..2394773,2394814..2395279,2395316..2395395)	Theileria orientalis strain Shintoku	20713844
TOT_010001018	CDS	TOT_010001018	NC_025260.1	2395574	2397064	D	queuine tRNA-ribosyltransferase	join(2395574..2395714,2395759..2395894,2395928..2396052,2396084..2396184,2396223..2396418,2396447..2396652,2396679..2396754,2396784..2396925,2396961..2397064)	Theileria orientalis strain Shintoku	20713845
TOT_010001019	CDS	TOT_010001019	NC_025260.1	2397453	2399339	D	calmodulin-like domain protein kinase	join(2397453..2398185,2398467..2398633,2398665..2398925,2398956..2399339)	Theileria orientalis strain Shintoku	20713846
TOT_010001020	CDS	TOT_010001020	NC_025260.1	2399957	2402120	D	haloacid dehalogenase-like family; hydrolase	join(2399957..2400119,2400154..2400594,2401068..2401256,2401290..2401489,2402070..2402120)	Theileria orientalis strain Shintoku	20713847
TOT_010001348	CDS	TOT_010001348	NC_025260.1	2402559	2402972	R	conserved hypothetical protein	complement(2402559..2402972)	Theileria orientalis strain Shintoku	20714147
TOT_010001349	CDS	TOT_010001349	NC_025260.1	2403105	2404390	R	conserved hypothetical protein	complement(join(2403105..2403183,2403221..2403574,2403612..2404390))	Theileria orientalis strain Shintoku	20714148
TOT_010001023	CDS	TOT_010001023	NC_025260.1	2404799	2406936	D	HAD superfamily hydrolase-like, type 3 domain containing protein; uncharacterized protein	join(2404799..2404961,2406070..2406228,2406263..2406936)	Theileria orientalis strain Shintoku	20713848
TOT_010001024	CDS	TOT_010001024	NC_025260.1	2407260	2408197	D	HAD-superfamily hydrolase, subfamily IIB protein	join(2407260..2407488,2407521..2408197)	Theileria orientalis strain Shintoku	20713849
TOT_010001025	CDS	TOT_010001025	NC_025260.1	2408797	2412412	D	haloacid dehalogenase-like family hydrolase	join(2408797..2408923,2408955..2409615,2409880..2411312,2411367..2411840,2411886..2412412)	Theileria orientalis strain Shintoku	20713850
TOT_010001026	CDS	TOT_010001026	NC_025260.1	2412629	2413623	R	nucleosome assembly protein	complement(join(2412629..2412850,2412884..2413003,2413139..2413297,2413327..2413430,2413460..2413512,2413571..2413623))	Theileria orientalis strain Shintoku	20713851
TOT_010001350	CDS	TOT_010001350	NC_025260.1	2414308	2415028	D	conserved hypothetical protein	join(2414308..2414453,2414522..2414811,2414853..2415028)	Theileria orientalis strain Shintoku	20714149
TOT_010001028	CDS	TOT_010001028	NC_025260.1	2415099	2420376	D	elongation factor 2	join(2415099..2415150,2415203..2416178,2416251..2416645,2416720..2416880,2416915..2417178,2417353..2417460,2417491..2417599,2417758..2418078,2418295..2418751,2418896..2419002,2419048..2419319,2419537..2419621,2419774..2420117,2420308..2420376)	Theileria orientalis strain Shintoku	20713852
TOT_010001029	CDS	TOT_010001029	NC_025260.1	2420483	2421240	R	step II splicing factor	complement(join(2420483..2421060,2421177..2421240))	Theileria orientalis strain Shintoku	20713853
TOT_010001030	CDS	TOT_010001030	NC_025260.1	2421489	2422693	D	apoptosis regulatory protein	join(2421489..2421963,2421995..2422171,2422209..2422693)	Theileria orientalis strain Shintoku	20713854
TOT_010001197	CDS	TOT_010001197	NC_025260.1	2423080	2424900	D	conserved hypothetical protein	join(2423080..2424189,2424250..2424900)	Theileria orientalis strain Shintoku	20713996
TOT_010001031	CDS	TOT_010001031	NC_025260.1	2425472	2427130	D	eukaryotic translation initiation factor 3 subunit	join(2425472..2425561,2425683..2425728,2425760..2425913,2426024..2426273,2426416..2426517,2426717..2426773,2426807..2427130)	Theileria orientalis strain Shintoku	20713855
TOT_010001351	CDS	TOT_010001351	NC_025260.1	2427356	2429273	R	conserved hypothetical protein	complement(join(2427356..2427491,2427553..2427876,2428028..2428120,2428214..2428432,2428472..2428528,2428559..2428685,2428916..2429273))	Theileria orientalis strain Shintoku	20714150
TOT_010001352	CDS	TOT_010001352	NC_025260.1	2429344	2431094	R	cysteine desulfurase	complement(join(2429344..2429501,2429606..2429786,2429818..2429946,2429978..2430121,2430152..2430346,2430365..2430494,2430526..2430641,2430736..2430816,2430858..2431094))	Theileria orientalis strain Shintoku	20714151
TOT_010001034	CDS	TOT_010001034	NC_025260.1	2431398	2433262	D	ATP-NAD/AcoX kinase family protein; uncharacterized protein	join(2431398..2431629,2431661..2431834,2431926..2432777,2432867..2432972,2433097..2433262)	Theileria orientalis strain Shintoku	20713856
TOT_010001035	CDS	TOT_010001035	NC_025260.1	2433259	2433396	R	hypothetical protein	complement(2433259..2433396)	Theileria orientalis strain Shintoku	20713857
TOT_010001036	CDS	TOT_010001036	NC_025260.1	2433434	2434334	R	translation elongation factor E1-F beta	complement(join(2433434..2433867,2434043..2434334))	Theileria orientalis strain Shintoku	20713858
TOT_010001037	CDS	TOT_010001037	NC_025260.1	2434914	2438381	D	kinesin	join(2434914..2436920,2437013..2437165,2437258..2437306,2437397..2437455,2437549..2437629,2437691..2437725,2437804..2438074,2438174..2438245,2438328..2438381)	Theileria orientalis strain Shintoku	20713859
TOT_010001038	CDS	TOT_010001038	NC_025260.1	2438607	2439838	D	peptidyl-prolyl cis-trans isomerase	join(2438607..2438684,2438805..2438845,2438907..2439018,2439088..2439193,2439223..2439317,2439455..2439541,2439574..2439699,2439734..2439838)	Theileria orientalis strain Shintoku	20713860
TOT_010001353	CDS	TOT_010001353	NC_025260.1	2440113	2441263	D	mitochondrial phosphate carrier protein	join(2440113..2440658,2440767..2440926,2440960..2441050,2441098..2441263)	Theileria orientalis strain Shintoku	20714152
TOT_010001040	CDS	TOT_010001040	NC_025260.1	2441462	2443097	D	XPA binding protein 1	join(2441462..2441538,2441767..2441863,2441972..2442070,2442079..2442265,2442270..2442372,2442406..2442455,2442510..2442600,2442723..2442814,2442885..2442942,2443040..2443097)	Theileria orientalis strain Shintoku	20713861
TOT_010001041	CDS	TOT_010001041	NC_025260.1	2443248	2445317	D	pseudouridylate synthase	join(2443248..2443474,2443618..2444124,2444269..2444809,2444953..2445095,2445233..2445317)	Theileria orientalis strain Shintoku	20713862
TOT_010001042	CDS	TOT_010001042	NC_025260.1	2445408	2446353	D	peptidyl-prolyl cis-trans isomerase	join(2445408..2445525,2445696..2445847,2446039..2446353)	Theileria orientalis strain Shintoku	20713863
TOT_010001043	CDS	TOT_010001043	NC_025260.1	2446624	2448405	R	ADP-ribosylation factor GTPase activating protein	complement(2446624..2448405)	Theileria orientalis strain Shintoku	20713864
TOT_010001044	CDS	TOT_010001044	NC_025260.1	2448615	2450081	R	protein kinase, core domain containing protein; uncharacterized protein	complement(2448615..2450081)	Theileria orientalis strain Shintoku	20713865
TOT_010001045	CDS	TOT_010001045	NC_025260.1	2450905	2451996	R	conserved hypothetical protein	complement(join(2450905..2451695,2451756..2451996))	Theileria orientalis strain Shintoku	20713866
TOT_010001046	CDS	TOT_010001046	NC_025260.1	2452977	2458202	D	myosin	join(2452977..2453336,2453404..2453689,2453758..2454748,2454818..2455006,2455067..2456141,2456281..2456459,2456536..2456734,2456804..2457241,2457306..2458202)	Theileria orientalis strain Shintoku	20713867
TOT_010001047	CDS	TOT_010001047	NC_025260.1	2458486	2461470	D	conserved hypothetical protein	2458486..2461470	Theileria orientalis strain Shintoku	20713868
TOT_010001048	CDS	TOT_010001048	NC_025260.1	2462075	2464157	D	conserved hypothetical protein	join(2462075..2462185,2462274..2462328,2462467..2462721,2462779..2462823,2462890..2464157)	Theileria orientalis strain Shintoku	20713869
TOT_010001049	CDS	TOT_010001049	NC_025260.1	2464584	2465773	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(2464584..2464688,2464710..2464853,2464904..2465010,2465052..2465570,2465710..2465773)	Theileria orientalis strain Shintoku	20713870
TOT_010001050	CDS	TOT_010001050	NC_025260.1	2465789	2468272	R	conserved hypothetical protein	complement(2465789..2468272)	Theileria orientalis strain Shintoku	20713871
TOT_010001051	CDS	TOT_010001051	NC_025260.1	2468622	2469891	D	conserved hypothetical protein	join(2468622..2468668,2468754..2469891)	Theileria orientalis strain Shintoku	20713872
TOT_010001052	CDS	TOT_010001052	NC_025260.1	2469930	2471189	R	hypothetical protein	complement(2469930..2471189)	Theileria orientalis strain Shintoku	20713873
TOT_010001053	CDS	TOT_010001053	NC_025260.1	2471706	2473421	D	chaperonin	join(2471706..2472129,2472193..2472769,2472812..2473421)	Theileria orientalis strain Shintoku	20713874
TOT_010001054	CDS	TOT_010001054	NC_025260.1	2473625	2476106	D	conserved hypothetical protein	join(2473625..2474286,2474460..2474806,2474924..2475243,2475439..2475549,2475765..2476106)	Theileria orientalis strain Shintoku	20713875
TOT_010001055	CDS	TOT_010001055	NC_025260.1	2476393	2477923	R	conserved hypothetical protein	complement(join(2476393..2476760,2476899..2476972,2477038..2477168,2477258..2477923))	Theileria orientalis strain Shintoku	20713876
TOT_010001056	CDS	TOT_010001056	NC_025260.1	2478168	2478515	D	hypothetical protein	2478168..2478515	Theileria orientalis strain Shintoku	20713877
TOT_010001057	CDS	TOT_010001057	NC_025260.1	2479023	2482620	D	predicted protein	join(2479023..2482310,2482399..2482620)	Theileria orientalis strain Shintoku	20713878
TOT_010001058	CDS	TOT_010001058	NC_025260.1	2482761	2483224	R	hypothetical protein	complement(join(2482761..2482933,2482969..2483224))	Theileria orientalis strain Shintoku	20713879
TOT_010001059	CDS	TOT_010001059	NC_025260.1	2483920	2484822	D	conserved hypothetical protein	join(2483920..2484613,2484776..2484822)	Theileria orientalis strain Shintoku	20713880
TOT_010001060	CDS	TOT_010001060	NC_025260.1	2484869	2485567	R	conserved hypothetical protein	complement(join(2484869..2484937,2484991..2485025,2485057..2485154,2485215..2485279,2485312..2485400,2485435..2485567))	Theileria orientalis strain Shintoku	20713881
TOT_010001061	CDS	TOT_010001061	NC_025260.1	2485923	2487067	R	Src homology-3 domain containing protein; uncharacterized protein	complement(join(2485923..2486963,2486996..2487067))	Theileria orientalis strain Shintoku	20713882
TOT_010001354	CDS	TOT_010001354	NC_025260.1	2487658	2489835	R	conserved hypothetical protein	complement(join(2487658..2488379,2488422..2488773,2488855..2489086,2489162..2489835))	Theileria orientalis strain Shintoku	20714153
TOT_010001063	CDS	TOT_010001063	NC_025260.1	2490302	2492018	D	chloroplast ribosomal protein L1/50S ribosomal protein L10	join(2490302..2490407,2490871..2491458,2491488..2491863,2491895..2492018)	Theileria orientalis strain Shintoku	20713883
TOT_010001064	CDS	TOT_010001064	NC_025260.1	2492097	2493913	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(2492097..2492366,2492550..2492651,2492782..2492911,2493066..2493913)	Theileria orientalis strain Shintoku	20713884
TOT_010001065	CDS	TOT_010001065	NC_025260.1	2494240	2497242	D	vacuolar sorting protein	join(2494240..2495742,2495947..2497242)	Theileria orientalis strain Shintoku	20713885
TOT_010001066	CDS	TOT_010001066	NC_025260.1	2497510	2500293	R	metalloprotease/cell division cycle protein	complement(join(2497510..2497634,2497872..2498633,2498828..2499376,2499438..2500293))	Theileria orientalis strain Shintoku	20713886
TOT_010001067	CDS	TOT_010001067	NC_025260.1	2500875	2502283	D	conserved hypothetical protein	join(2500875..2501343,2501381..2501442,2501473..2501574,2501615..2501786,2501816..2501899,2501973..2502118,2502188..2502283)	Theileria orientalis strain Shintoku	20713887
TOT_010001355	CDS	TOT_010001355	NC_025260.1	2502377	2505436	R	DNA topoisomerase 2	complement(join(2502377..2503053,2503106..2503169,2503202..2503395,2503474..2503633,2503668..2503768,2503812..2503890,2503950..2504097,2504161..2504264,2504303..2505436))	Theileria orientalis strain Shintoku	20714154
TOT_010001069	CDS	TOT_010001069	NC_025260.1	2506103	2506451	D	hypothetical protein	join(2506103..2506214,2506269..2506334,2506411..2506451)	Theileria orientalis strain Shintoku	20713888
TOT_010001070	CDS	TOT_010001070	NC_025260.1	2506615	2508597	R	conserved hypothetical protein	complement(join(2506615..2507842,2507987..2508597))	Theileria orientalis strain Shintoku	20713889
TOT_010001071	CDS	TOT_010001071	NC_025260.1	2509540	2510292	R	putative ribosomal protein L23	complement(join(2509540..2509650,2509681..2509826,2509869..2510292))	Theileria orientalis strain Shintoku	20713890
TOT_010001072	CDS	TOT_010001072	NC_025260.1	2510474	2511983	R	conserved hypothetical protein	complement(join(2510474..2510599,2510630..2510749,2510783..2510866,2511000..2511983))	Theileria orientalis strain Shintoku	20713891
TOT_010001073	CDS	TOT_010001073	NC_025260.1	2513382	2515559	D	phosphatidylglycerophosphate synthase	2513382..2515559	Theileria orientalis strain Shintoku	20713892
TOT_010001074	CDS	TOT_010001074	NC_025260.1	2515608	2516557	D	conserved hypothetical protein	join(2515608..2515631,2515661..2515883,2515919..2515993,2516025..2516095,2516132..2516557)	Theileria orientalis strain Shintoku	20713893
TOT_010001356	CDS	TOT_010001356	NC_025260.1	2517248	2523952	D	DEAD-box family helicase	join(2517248..2518035,2518159..2518633,2518862..2519207,2519670..2520872,2521602..2521674,2521810..2522485,2522619..2522788,2522980..2523172,2523289..2523477,2523677..2523952)	Theileria orientalis strain Shintoku	20714155
TOT_010001076	CDS	TOT_010001076	NC_025260.1	2524302	2525445	R	orotidine 5'-phosphate decarboxylase	complement(join(2524302..2524399,2524537..2524671,2524726..2525047,2525152..2525445))	Theileria orientalis strain Shintoku	20713894
TOT_010001077	CDS	TOT_010001077	NC_025260.1	2525482	2528157	R	conserved hypothetical protein	complement(join(2525482..2526141,2526214..2527234,2527295..2528157))	Theileria orientalis strain Shintoku	20713895
TOT_010001078	CDS	TOT_010001078	NC_025260.1	2528671	2532669	D	conserved hypothetical protein	join(2528671..2530555,2530790..2532669)	Theileria orientalis strain Shintoku	20713896
TOT_010001079	CDS	TOT_010001079	NC_025260.1	2532983	2534194	R	UFD1 homologue; ubiquitin-fusion degradation pathway component	complement(join(2532983..2533262,2533353..2533455,2533488..2533899,2533997..2534194))	Theileria orientalis strain Shintoku	20713897
TOT_010001080	CDS	TOT_010001080	NC_025260.1	2534579	2535634	D	UAA transporter family protein; uncharacterized protein	2534579..2535634	Theileria orientalis strain Shintoku	20713898
TOT_010001081	CDS	TOT_010001081	NC_025260.1	2535967	2537510	R	ubiquitin-related chaperonin	complement(join(2535967..2536391,2536491..2536635,2536695..2536846,2536960..2537034,2537111..2537281,2537330..2537510))	Theileria orientalis strain Shintoku	20713899
TOT_010001082	CDS	TOT_010001082	NC_025260.1	2538095	2538883	R	peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein; uncharacterized protein	complement(join(2538095..2538157,2538186..2538260,2538291..2538380,2538448..2538594,2538744..2538799,2538844..2538883))	Theileria orientalis strain Shintoku	20713900
TOT_010001083	CDS	TOT_010001083	NC_025260.1	2539115	2541025	R	conserved hypothetical protein	complement(join(2539115..2540001,2540086..2541025))	Theileria orientalis strain Shintoku	20713901
TOT_010001084	CDS	TOT_010001084	NC_025260.1	2542776	2543282	R	protein tyrosine phosphatase	complement(2542776..2543282)	Theileria orientalis strain Shintoku	20713902
TOT_010001085	CDS	TOT_010001085	NC_025260.1	2544554	2544847	D	acylphosphatase	2544554..2544847	Theileria orientalis strain Shintoku	20713903
TOT_010001086	CDS	TOT_010001086	NC_025260.1	2544896	2546237	R	conserved hypothetical protein	complement(join(2544896..2545055,2545132..2545251,2545470..2545562,2545657..2546237))	Theileria orientalis strain Shintoku	20713904
TOT_010001087	CDS	TOT_010001087	NC_025260.1	2547111	2547436	D	hypothetical protein	join(2547111..2547224,2547251..2547436)	Theileria orientalis strain Shintoku	20713905
TOT_010001088	CDS	TOT_010001088	NC_025260.1	2548017	2550783	D	inositol phosphatase	join(2548017..2548964,2549170..2549514,2550118..2550783)	Theileria orientalis strain Shintoku	20713906
TOT_010001089	CDS	TOT_010001089	NC_025260.1	2551258	2551950	D	conserved hypothetical protein	2551258..2551950	Theileria orientalis strain Shintoku	20713907
TOT_010001357	CDS	TOT_010001357	NC_025260.1	2552312	2553474	R	conserved hypothetical protein	complement(join(2552312..2552444,2552832..2552897,2552940..2552992,2553391..2553474))	Theileria orientalis strain Shintoku	20714156
TOT_010001358	CDS	TOT_010001358	NC_025260.1	2553611	2554023	R	conserved hypothetical protein	complement(join(2553611..2553703,2553737..2553786,2553818..2553894,2553938..2554023))	Theileria orientalis strain Shintoku	20714157
TOT_010001359	CDS	TOT_010001359	NC_025260.1	2554985	2557322	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(2554985..2555132,2555200..2555271,2555337..2555453,2555483..2555642,2555736..2556002,2556140..2556592,2556635..2557322))	Theileria orientalis strain Shintoku	20714158
TOT_010001093	CDS	TOT_010001093	NC_025260.1	2558146	2562754	D	synaptojanin, N-terminal domain containing protein; uncharacterized protein	join(2558146..2558920,2559062..2559589,2559686..2559848,2560230..2560750,2560916..2561186,2561259..2561286,2561329..2561515,2561679..2561882,2562020..2562425,2562619..2562754)	Theileria orientalis strain Shintoku	20713908
TOT_010001094	CDS	TOT_010001094	NC_025260.1	2562877	2564938	R	aspartyl aminopeptidase	complement(join(2562877..2562930,2563066..2563580,2563688..2563863,2563957..2564045,2564115..2564224,2564291..2564381,2564456..2564568,2564673..2564749,2564784..2564938))	Theileria orientalis strain Shintoku	20713909
TOT_010001095	CDS	TOT_010001095	NC_025260.1	2565090	2568465	D	SJCHGC02352 protein; uncharacterized protein	join(2565090..2565332,2565400..2565627,2565708..2565831,2565943..2566674,2566830..2566906,2567031..2567069,2567098..2567256,2567331..2567405,2567711..2567807,2567930..2568014,2568195..2568465)	Theileria orientalis strain Shintoku	20713910
TOT_010001096	CDS	TOT_010001096	NC_025260.1	2569544	2570883	D	predicted protein	join(2569544..2569621,2569655..2569766,2569798..2569988,2570057..2570319,2570451..2570883)	Theileria orientalis strain Shintoku	20713911
TOT_010001360	CDS	TOT_010001360	NC_025260.1	2571039	2571855	R	conserved hypothetical protein	complement(join(2571039..2571090,2571140..2571280,2571332..2571386,2571419..2571502,2571531..2571855))	Theileria orientalis strain Shintoku	20714159
TOT_010001098	CDS	TOT_010001098	NC_025260.1	2572073	2574256	R	RAP domain containing protein; uncharacterized protein	complement(join(2572073..2572198,2572285..2572361,2572393..2572537,2572570..2572640,2572670..2572778,2572809..2572880,2572957..2573128,2573160..2573261,2573292..2573377,2573407..2573483,2573515..2573588,2573619..2574256))	Theileria orientalis strain Shintoku	20713912
TOT_010001099	CDS	TOT_010001099	NC_025260.1	2574372	2575103	R	Fe/Mn superoxide dismutase	complement(join(2574372..2574564,2574596..2574872,2574910..2574951,2574983..2575103))	Theileria orientalis strain Shintoku	20713913
TOT_010001100	CDS	TOT_010001100	NC_025260.1	2575613	2577638	D	DDHD domain containing protein; uncharacterized protein	join(2575613..2575812,2575845..2576004,2576037..2576138,2576169..2576273,2576346..2576537,2576567..2576693,2576813..2577048,2577150..2577416,2577495..2577638)	Theileria orientalis strain Shintoku	20713914
TOT_010001101	CDS	TOT_010001101	NC_025260.1	2577848	2581021	D	ATPase	join(2577848..2577956,2577997..2578141,2578176..2578615,2578701..2578966,2579029..2579166,2579292..2579441,2579526..2579853,2580044..2580237,2580365..2580570,2580793..2581021)	Theileria orientalis strain Shintoku	20713915
TOT_010001102	CDS	TOT_010001102	NC_025260.1	2581311	2583105	R	conserved hypothetical protein	complement(join(2581311..2581733,2581794..2582121,2582179..2582773,2582808..2582968,2583005..2583105))	Theileria orientalis strain Shintoku	20713916
TOT_010001103	CDS	TOT_010001103	NC_025260.1	2583499	2585962	R	DNA/RNA helicase, C-terminal domain containing protein; uncharacterized protein	complement(join(2583499..2583603,2583761..2584944,2584975..2585223,2585305..2585962))	Theileria orientalis strain Shintoku	20713917
TOT_010001104	CDS	TOT_010001104	NC_025260.1	2586909	2592817	D	conserved hypothetical protein	join(2586909..2587029,2587065..2592817)	Theileria orientalis strain Shintoku	20713918
TOT_010001105	CDS	TOT_010001105	NC_025260.1	2592977	2594235	R	glutamine amidotransferase class-I domain containing protein; uncharacterized protein	complement(join(2592977..2593437,2593467..2593651,2593683..2593798,2593828..2594169,2594203..2594235))	Theileria orientalis strain Shintoku	20713919
TOT_010001106	CDS	TOT_010001106	NC_025260.1	2594563	2596180	R	major facilitator superfamily MFS-1 protein	complement(join(2594563..2594645,2594678..2594903,2594937..2595139,2595172..2595367,2595400..2595804,2595836..2596180))	Theileria orientalis strain Shintoku	20713920
TOT_010001107	CDS	TOT_010001107	NC_025260.1	2597390	2599380	R	major facilitator superfamily MFS-1 protein	complement(join(2597390..2597761,2597793..2597995,2598070..2598265,2598309..2598719,2598882..2599271,2599318..2599380))	Theileria orientalis strain Shintoku	20713921
TOT_010001108	CDS	TOT_010001108	NC_025260.1	2599466	2600926	R	conserved hypothetical protein	complement(join(2599466..2599580,2599671..2600926))	Theileria orientalis strain Shintoku	20713922
TOT_010001109	CDS	TOT_010001109	NC_025260.1	2601441	2603804	D	ATP-dependent RNA helicase	join(2601441..2601893,2601923..2602159,2602189..2602320,2602353..2602430,2602461..2603098,2603269..2603572,2603607..2603804)	Theileria orientalis strain Shintoku	20713923
TOT_010001110	CDS	TOT_010001110	NC_025260.1	2603995	2605521	R	transcription or splicing factor-like protein	complement(join(2603995..2604315,2604363..2604479,2604554..2604967,2604997..2605521))	Theileria orientalis strain Shintoku	20713924
TOT_010001111	CDS	TOT_010001111	NC_025260.1	2606533	2611103	D	eukaryotic initiation factor-2 alpha kinase-A	join(2606533..2608023,2608111..2609525,2609743..2609864,2609904..2610066,2610288..2610528,2610777..2611103)	Theileria orientalis strain Shintoku	20713925
TOT_010001112	CDS	TOT_010001112	NC_025260.1	2611221	2611959	R	U1 snRNP-specific protein C	complement(join(2611221..2611423,2611620..2611715,2611747..2611812,2611842..2611959))	Theileria orientalis strain Shintoku	20713926
TOT_010001113	CDS	TOT_010001113	NC_025260.1	2612290	2612541	D	conserved hypothetical protein	2612290..2612541	Theileria orientalis strain Shintoku	20713927
TOT_010001114	CDS	TOT_010001114	NC_025260.1	2612882	2615283	R	conserved hypothetical protein	complement(join(2612882..2613031,2613085..2613237,2613269..2615241,2615253..2615283))	Theileria orientalis strain Shintoku	20713928
TOT_010001361	CDS	TOT_010001361	NC_025260.1	2616214	2617086	D	conserved hypothetical protein	2616214..2617086	Theileria orientalis strain Shintoku	20714160
TOT_010001116	CDS	TOT_010001116	NC_025260.1	2617328	2621962	R	pre-mRNA splicing protein	complement(join(2617328..2620225,2620258..2620353,2620760..2621307,2621340..2621377,2621416..2621499,2621534..2621615,2621646..2621712,2621743..2621867,2621914..2621962))	Theileria orientalis strain Shintoku	20713929
TOT_010001117	CDS	TOT_010001117	NC_025260.1	2622169	2623221	R	L-lactate dehydrogenase	complement(join(2622169..2622885,2622918..2623045,2623095..2623221))	Theileria orientalis strain Shintoku	20713930
TOT_010001118	CDS	TOT_010001118	NC_025260.1	2623483	2624108	R	protein of unknown function DUF1168 family protein; uncharacterized protein	complement(join(2623483..2623919,2623952..2624108))	Theileria orientalis strain Shintoku	20713931
TOT_010001362	CDS	TOT_010001362	NC_025260.1	2624640	2625521	D	NADH:cytochrome b5 reductase (CBR) family protein; uncharacterized protein	join(2624640..2624799,2624829..2625304,2625336..2625521)	Theileria orientalis strain Shintoku	20714161
TOT_010001120	CDS	TOT_010001120	NC_025260.1	2625989	2627640	R	conserved hypothetical protein	complement(join(2625989..2626128,2626158..2627640))	Theileria orientalis strain Shintoku	20713932
TOT_010001121	CDS	TOT_010001121	NC_025260.1	2627842	2628425	R	EGF-like, type 3 domain containing protein; uncharacterized protein	complement(join(2627842..2628113,2628143..2628425))	Theileria orientalis strain Shintoku	20713933
TOT_010001122	CDS	TOT_010001122	NC_025260.1	2628962	2629384	D	GCN5-related N-acetyltransferase domain containing protein; uncharacterized protein	2628962..2629384	Theileria orientalis strain Shintoku	20713934
TOT_010001123	CDS	TOT_010001123	NC_025260.1	2630022	2646590	D	HECT domain containing protein; uncharacterized protein	join(2630022..2633806,2633846..2634529,2634596..2641021,2641181..2645041,2645297..2646173,2646411..2646590)	Theileria orientalis strain Shintoku	20713935
TOT_010001124	CDS	TOT_010001124	NC_025260.1	2646726	2647509	R	ribonuclease P subunit	complement(join(2646726..2646893,2646964..2647509))	Theileria orientalis strain Shintoku	20713936
TOT_010001125	CDS	TOT_010001125	NC_025260.1	2647679	2649787	R	homeodomain-like containing protein	complement(join(2647679..2648420,2648523..2649178,2649208..2649549,2649713..2649787))	Theileria orientalis strain Shintoku	20713937
TOT_010001126	CDS	TOT_010001126	NC_025260.1	2650220	2651613	D	ethanolamine phosphotransferase	join(2650220..2650363,2650395..2650544,2650574..2650732,2650763..2650879,2650909..2651066,2651097..2651167,2651198..2651613)	Theileria orientalis strain Shintoku	20713938
TOT_010001127	CDS	TOT_010001127	NC_025260.1	2651979	2654355	D	conserved hypothetical protein	join(2651979..2654150,2654185..2654355)	Theileria orientalis strain Shintoku	20713939
TOT_010001128	CDS	TOT_010001128	NC_025260.1	2655063	2657399	D	pleckstrin-like domain containing protein; uncharacterized protein	join(2655063..2655593,2655669..2657399)	Theileria orientalis strain Shintoku	20713940
TOT_010001129	CDS	TOT_010001129	NC_025260.1	2657460	2659844	D	protein synthesis factor, GTP-binding domain containing protein; uncharacterized protein	join(2657460..2657597,2657632..2657747,2657782..2657884,2657918..2658005,2658037..2658971,2659003..2659169,2659289..2659844)	Theileria orientalis strain Shintoku	20713941
TOT_010001130	CDS	TOT_010001130	NC_025260.1	2660057	2661276	R	conserved hypothetical protein	complement(join(2660057..2660132,2660152..2661104,2661142..2661276))	Theileria orientalis strain Shintoku	20713942
TOT_010001131	CDS	TOT_010001131	NC_025260.1	2662000	2663246	D	regulator of chromosome condensation/beta-lactamase-inhibitor protein II domain containing protein; uncharacterized protein	join(2662000..2662177,2662212..2662333,2662364..2662452,2662484..2662581,2662614..2662656,2662699..2662836,2662869..2663083,2663125..2663246)	Theileria orientalis strain Shintoku	20713943
TOT_010001363	CDS	TOT_010001363	NC_025260.1	2663521	2664852	D	lipoate-protein ligase	join(2663521..2663790,2663825..2663924,2663953..2664008,2664039..2664087,2664120..2664190,2664221..2664295,2664326..2664382,2664414..2664485,2664517..2664743,2664774..2664852)	Theileria orientalis strain Shintoku	20714162
TOT_010001133	CDS	TOT_010001133	NC_025260.1	2664906	2665823	R	Pinin/SDK/memA protein domain containing protein; uncharacterized protein	complement(join(2664906..2665085,2665174..2665248,2665287..2665379,2665409..2665567,2665608..2665681,2665715..2665823))	Theileria orientalis strain Shintoku	20713944
TOT_010001134	CDS	TOT_010001134	NC_025260.1	2665884	2667036	R	tubulin binding cofactor C domain containing protein; uncharacterized protein	complement(join(2665884..2666087,2666126..2666189,2666255..2666395,2666426..2666499,2666533..2666587,2666620..2666828,2666860..2667036))	Theileria orientalis strain Shintoku	20713945
TOT_010001135	CDS	TOT_010001135	NC_025260.1	2667344	2668090	D	vesicle transport protein	join(2667344..2667495,2667536..2667662,2667704..2667874,2667905..2668090)	Theileria orientalis strain Shintoku	20713946
TOT_010001136	CDS	TOT_010001136	NC_025260.1	2668220	2669498	R	ribonucleoside reductase	complement(join(2668220..2668422,2668582..2668924,2668955..2669126,2669161..2669297,2669334..2669366,2669403..2669498))	Theileria orientalis strain Shintoku	20713947
TOT_010001137	CDS	TOT_010001137	NC_025260.1	2670055	2673438	D	hypothetical protein	join(2670055..2672859,2673004..2673438)	Theileria orientalis strain Shintoku	20713948
TOT_010001138	CDS	TOT_010001138	NC_025260.1	2673563	2674387	D	conserved hypothetical protein	2673563..2674387	Theileria orientalis strain Shintoku	20713949
TOT_010001139	CDS	TOT_010001139	NC_025260.1	2674690	2675649	D	conserved hypothetical protein	2674690..2675649	Theileria orientalis strain Shintoku	20713950
TOT_010001140	CDS	TOT_010001140	NC_025260.1	2676115	2677085	D	endonuclease/exonuclease/phosphatase domain containing protein; uncharacterized protein	join(2676115..2676850,2676880..2677085)	Theileria orientalis strain Shintoku	20713951
TOT_010001141	CDS	TOT_010001141	NC_025260.1	2677245	2680699	R	3'5'-cyclic nucleotide phosphodiesterase domain containing protein; uncharacterized protein	complement(join(2677245..2677651,2677835..2678127,2678284..2678992,2679057..2679496,2679701..2679870,2679917..2680062,2680136..2680372,2680456..2680699))	Theileria orientalis strain Shintoku	20713952
TOT_010001142	CDS	TOT_010001142	NC_025260.1	2681587	2682535	D	RNA-binding protein	join(2681587..2681658,2681697..2681858,2681918..2682535)	Theileria orientalis strain Shintoku	20713953
TOT_010001364	CDS	TOT_010001364	NC_025260.1	2682768	2684393	R	cell-cycle-control protein	complement(2682768..2684393)	Theileria orientalis strain Shintoku	20714163
TOT_010001365	CDS	TOT_010001365	NC_025260.1	2684723	2685155	R	30S ribosomal protein S8	complement(join(2684723..2684929,2684973..2685155))	Theileria orientalis strain Shintoku	20714164
TOT_010001145	CDS	TOT_010001145	NC_025260.1	2685809	2686447	D	small GTPase	2685809..2686447	Theileria orientalis strain Shintoku	20713954
TOT_010001146	CDS	TOT_010001146	NC_025260.1	2687037	2688013	D	protein of unknown function DUF862, eukaryotic domain containing protein; uncharacterized protein	join(2687037..2687791,2687863..2688013)	Theileria orientalis strain Shintoku	20713955
TOT_010001366	CDS	TOT_010001366	NC_025260.1	2688273	2689649	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(2688273..2689649)	Theileria orientalis strain Shintoku	20714165
TOT_010001367	CDS	TOT_010001367	NC_025260.1	2690028	2690622	R	conserved hypothetical protein	complement(join(2690028..2690327,2690359..2690622))	Theileria orientalis strain Shintoku	20714166
TOT_010001149	CDS	TOT_010001149	NC_025260.1	2690776	2691656	R	conserved hypothetical protein	complement(join(2690776..2691114,2691150..2691253,2691284..2691529,2691575..2691656))	Theileria orientalis strain Shintoku	20713956
TOT_010001368	CDS	TOT_010001368	NC_025260.1	2692393	2693175	D	mitochondrial substrate carrier family protein; uncharacterized protein	join(2692393..2692591,2692624..2692797,2692829..2692925,2692957..2693023,2693053..2693175)	Theileria orientalis strain Shintoku	20714167
TOT_010001151	CDS	TOT_010001151	NC_025260.1	2693299	2694430	D	conserved hypothetical protein	join(2693299..2693487,2693559..2693663,2693705..2693792,2693887..2693984,2694015..2694106,2694133..2694192,2694223..2694430)	Theileria orientalis strain Shintoku	20713957
TOT_010001152	CDS	TOT_010001152	NC_025260.1	2694711	2696423	R	aminoacyl-tRNA synthetase, class I (M) domain containing protein; uncharacterized protein	complement(2694711..2696423)	Theileria orientalis strain Shintoku	20713958
TOT_010001153	CDS	TOT_010001153	NC_025260.1	2696732	2698759	D	protein of unknown function DUF1253 family protein; uncharacterized protein	join(2696732..2697478,2697511..2697759,2697789..2697890,2697923..2698201,2698237..2698331,2698361..2698461,2698491..2698759)	Theileria orientalis strain Shintoku	20713959
TOT_010001154	CDS	TOT_010001154	NC_025260.1	2698997	2700427	D	Os01g0276600 protein; uncharacterized protein	join(2698997..2699149,2699181..2699685,2699717..2699999,2700056..2700148,2700295..2700427)	Theileria orientalis strain Shintoku	20713960
TOT_010001369	CDS	TOT_010001369	NC_025260.1	2700263	2700754	R	conserved hypothetical protein	complement(join(2700263..2700370,2700408..2700485,2700523..2700556,2700621..2700754))	Theileria orientalis strain Shintoku	20714168
TOT_010001156	CDS	TOT_010001156	NC_025260.1	2701433	2702310	D	cyclin	join(2701433..2701504,2701537..2701641,2701675..2701818,2701850..2702043,2702072..2702168,2702200..2702310)	Theileria orientalis strain Shintoku	20713961
TOT_010001370	CDS	TOT_010001370	NC_025260.1	2702423	2702947	R	conserved hypothetical protein	complement(2702423..2702947)	Theileria orientalis strain Shintoku	20714169
TOT_010001158	CDS	TOT_010001158	NC_025260.1	2703800	2704306	R	conserved hypothetical protein	complement(2703800..2704306)	Theileria orientalis strain Shintoku	20713962
TOT_010001371	CDS	TOT_010001371	NC_025260.1	2704892	2705575	D	phosphatidylserine decarboxylase	2704892..2705575	Theileria orientalis strain Shintoku	20714170
TOT_010001160	CDS	TOT_010001160	NC_025260.1	2707931	2708479	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	2707931..2708479	Theileria orientalis strain Shintoku	20713963
TOT_010001161	CDS	TOT_010001161	NC_025260.1	2709001	2712324	D	conserved hypothetical protein	join(2709001..2709460,2709695..2712324)	Theileria orientalis strain Shintoku	20713964
TOT_010001162	CDS	TOT_010001162	NC_025260.1	2713173	2713283	D	hypothetical protein	2713173..2713283	Theileria orientalis strain Shintoku	20713965
TOT_010001163	CDS	TOT_010001163	NC_025260.1	2713658	2713928	R	hypothetical protein	complement(join(2713658..2713687,2713806..2713928))	Theileria orientalis strain Shintoku	20713966
TOT_010001164	CDS	TOT_010001164	NC_025260.1	2713958	2719066	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	2713958..2719066	Theileria orientalis strain Shintoku	20713967
TOT_010001165	CDS	TOT_010001165	NC_025260.1	2720053	2721825	D	conserved hypothetical protein	2720053..2721825	Theileria orientalis strain Shintoku	20713968
TOT_010001166	CDS	TOT_010001166	NC_025260.1	2722050	2722763	R	hypothetical protein	complement(2722050..2722763)	Theileria orientalis strain Shintoku	20713969
TOT_010001167	CDS	TOT_010001167	NC_025260.1	2723372	2723902	R	conserved hypothetical protein	complement(2723372..2723902)	Theileria orientalis strain Shintoku	20713970
TOT_010001168	CDS	TOT_010001168	NC_025260.1	2724005	2724209	D	hypothetical protein	join(2724005..2724007,2724030..2724209)	Theileria orientalis strain Shintoku	20713971
TOT_010001169	CDS	TOT_010001169	NC_025260.1	2724765	2726057	R	conserved hypothetical protein	complement(2724765..2726057)	Theileria orientalis strain Shintoku	20713972
TOT_010001170	CDS	TOT_010001170	NC_025260.1	2726304	2726776	D	hypothetical protein	join(2726304..2726389,2726713..2726776)	Theileria orientalis strain Shintoku	20713973
TOT_010001171	CDS	TOT_010001171	NC_025260.1	2726992	2731830	R	cupin, RmlC-type domain containing protein; uncharacterized protein	complement(2726992..2731830)	Theileria orientalis strain Shintoku	20713974
TOT_010001172	CDS	TOT_010001172	NC_025260.1	2732873	2733109	R	hypothetical protein	complement(2732873..2733109)	Theileria orientalis strain Shintoku	20713975
TOT_010001173	CDS	TOT_010001173	NC_025260.1	2733229	2733411	D	hypothetical protein	join(2733229..2733261,2733292..2733411)	Theileria orientalis strain Shintoku	20713976
TOT_010001174	CDS	TOT_010001174	NC_025260.1	2734226	2734955	D	hypothetical protein	join(2734226..2734286,2734464..2734600,2734830..2734955)	Theileria orientalis strain Shintoku	20713977
TOT_010001175	CDS	TOT_010001175	NC_025260.1	2735050	2735255	R	hypothetical protein	complement(join(2735050..2735132,2735198..2735255))	Theileria orientalis strain Shintoku	20713978
TOT_010001176	CDS	TOT_010001176	NC_025260.1	2735484	2740004	D	ABC transporter	2735484..2740004	Theileria orientalis strain Shintoku	20713979
TOT_010001177	CDS	TOT_010001177	NC_025260.1	2740763	2740965	D	hypothetical protein	join(2740763..2740807,2740873..2740965)	Theileria orientalis strain Shintoku	20713980
TOT_010001178	CDS	TOT_010001178	NC_025260.1	2741368	2742816	R	conserved hypothetical protein	complement(2741368..2742816)	Theileria orientalis strain Shintoku	20713981
TOT_010001179	CDS	TOT_010001179	NC_025260.1	2743467	2743628	R	hypothetical protein	complement(2743467..2743628)	Theileria orientalis strain Shintoku	20713982
TOT_010001180	CDS	TOT_010001180	NC_025260.1	2743913	2745002	R	conserved hypothetical protein	complement(join(2743913..2744012,2744462..2744795,2744951..2745002))	Theileria orientalis strain Shintoku	20713983
TOT_010001372	CDS	TOT_010001372	NC_025260.1	2745344	2745532	R	hypothetical protein	complement(2745344..2745532)	Theileria orientalis strain Shintoku	20714171
TOT_020000001	CDS	TOT_020000001	NC_025261.1	949	7161	R	conserved hypothetical protein	complement(join(949..1563,5884..7161))	Theileria orientalis strain Shintoku	20714190
TOT_020000002	CDS	TOT_020000002	NC_025261.1	8510	8871	D	hypothetical protein	join(8510..8628,8718..8871)	Theileria orientalis strain Shintoku	20714191
TOT_020000003	CDS	TOT_020000003	NC_025261.1	9481	10925	D	hypothetical protein	join(9481..9557,10778..10925)	Theileria orientalis strain Shintoku	20714192
TOT_020000004	CDS	TOT_020000004	NC_025261.1	12065	19255	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(12065..13330,13358..16052,16089..19255)	Theileria orientalis strain Shintoku	20714193
TOT_020000005	CDS	TOT_020000005	NC_025261.1	19263	19391	D	hypothetical protein	19263..19391	Theileria orientalis strain Shintoku	20714194
TOT_020000006	CDS	TOT_020000006	NC_025261.1	19823	24406	R	ABC transporter related domain containing protein; uncharacterized protein	complement(19823..24406)	Theileria orientalis strain Shintoku	20714195
TOT_020000007	CDS	TOT_020000007	NC_025261.1	25597	27091	D	conserved hypothetical protein	join(25597..26861,27013..27091)	Theileria orientalis strain Shintoku	20714196
TOT_020000008	CDS	TOT_020000008	NC_025261.1	27623	29041	D	conserved hypothetical protein	join(27623..27920,28014..29041)	Theileria orientalis strain Shintoku	20714197
TOT_020000009	CDS	TOT_020000009	NC_025261.1	29095	30659	R	conserved hypothetical protein	complement(join(29095..29142,29385..30659))	Theileria orientalis strain Shintoku	20714198
TOT_020000010	CDS	TOT_020000010	NC_025261.1	31156	34731	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(31156..33223,33254..33454,33479..33546,33697..34731))	Theileria orientalis strain Shintoku	20714199
TOT_020000011	CDS	TOT_020000011	NC_025261.1	35034	35162	R	hypothetical protein	complement(35034..35162)	Theileria orientalis strain Shintoku	20714200
TOT_020000012	CDS	TOT_020000012	NC_025261.1	35947	36456	D	conserved hypothetical protein	35947..36456	Theileria orientalis strain Shintoku	20714201
TOT_020000013	CDS	TOT_020000013	NC_025261.1	37129	42258	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	37129..42258	Theileria orientalis strain Shintoku	20714202
TOT_020000014	CDS	TOT_020000014	NC_025261.1	42495	43979	R	conserved hypothetical protein	complement(join(42495..43007,43362..43979))	Theileria orientalis strain Shintoku	20714203
TOT_020000015	CDS	TOT_020000015	NC_025261.1	44303	46984	R	conserved hypothetical protein	complement(44303..46984)	Theileria orientalis strain Shintoku	20714204
TOT_020001016	CDS	TOT_020001016	NC_025261.1	47312	48444	R	conserved hypothetical protein	complement(join(47312..47518,47550..48162,48258..48321,48357..48444))	Theileria orientalis strain Shintoku	20715107
TOT_020000017	CDS	TOT_020000017	NC_025261.1	48695	49804	D	nucleic acid binding, OB-fold, tRNA/helicase-type domain containing protein; uncharacterized protein	join(48695..48758,48802..48921,48951..49318,49351..49506,49536..49668,49701..49804)	Theileria orientalis strain Shintoku	20714205
TOT_020000018	CDS	TOT_020000018	NC_025261.1	50160	54240	D	conserved hypothetical protein	join(50160..50749,50873..52063,52095..52188,52219..52316,52346..52868,52947..53299,53332..53428,53459..53817,53850..53973,54004..54240)	Theileria orientalis strain Shintoku	20714206
TOT_020000019	CDS	TOT_020000019	NC_025261.1	54311	57775	D	ubiquitin-transferase	join(54311..54936,54979..56002,56035..57429,57527..57775)	Theileria orientalis strain Shintoku	20714207
TOT_020000020	CDS	TOT_020000020	NC_025261.1	57972	59187	R	conserved hypothetical protein	complement(join(57972..58081,58112..58873,58905..59187))	Theileria orientalis strain Shintoku	20714208
TOT_020000021	CDS	TOT_020000021	NC_025261.1	59322	60780	D	conserved hypothetical protein	join(59322..59491,59539..59788,59888..60058,60089..60134,60167..60486,60528..60697,60729..60780)	Theileria orientalis strain Shintoku	20714209
TOT_020000022	CDS	TOT_020000022	NC_025261.1	60952	65253	D	conserved hypothetical protein	join(60952..61578,61627..65253)	Theileria orientalis strain Shintoku	20714210
TOT_020000994	CDS	TOT_020000994	NC_025261.1	65506	68157	R	conserved hypothetical protein	complement(join(65506..65614,65644..65766,65869..66002,66065..66248,66282..66404,66504..67383,67416..67722,67780..68157))	Theileria orientalis strain Shintoku	20715092
TOT_020000024	CDS	TOT_020000024	NC_025261.1	68642	69843	D	vacuolar ATP synthase	join(68642..69728,69761..69843)	Theileria orientalis strain Shintoku	20714211
TOT_020000995	CDS	TOT_020000995	NC_025261.1	69965	70387	D	thioredoxin	69965..70387	Theileria orientalis strain Shintoku	20715093
TOT_020001017	CDS	TOT_020001017	NC_025261.1	70633	71153	D	protein yippee-like 1	join(70633..70679,70719..70811,70842..70942,70980..71047,71082..71153)	Theileria orientalis strain Shintoku	20715108
TOT_020000025	CDS	TOT_020000025	NC_025261.1	71270	72607	R	histone deacetylase	complement(71270..72607)	Theileria orientalis strain Shintoku	20714212
TOT_020000026	CDS	TOT_020000026	NC_025261.1	72933	74450	D	aminoacyl-tRNA synthetase, class II (G, H, P and S) domain containing protein; uncharacterized protein	join(72933..73002,73066..74450)	Theileria orientalis strain Shintoku	20714213
TOT_020000027	CDS	TOT_020000027	NC_025261.1	74705	75934	D	conserved hypothetical protein	join(74705..74747,74850..75664,75749..75934)	Theileria orientalis strain Shintoku	20714214
TOT_020000028	CDS	TOT_020000028	NC_025261.1	75987	77024	D	serine/threonine protein phosphatase pp-x isozyme 1	join(75987..76212,76261..77024)	Theileria orientalis strain Shintoku	20714215
TOT_020000029	CDS	TOT_020000029	NC_025261.1	78812	80510	R	histone	complement(join(78812..79684,80051..80252,80419..80510))	Theileria orientalis strain Shintoku	20714216
TOT_020000030	CDS	TOT_020000030	NC_025261.1	80829	81726	D	cytochrome Coxidase subunit	join(80829..81121,81181..81464,81626..81726)	Theileria orientalis strain Shintoku	20714217
TOT_020000031	CDS	TOT_020000031	NC_025261.1	81996	83453	D	aspartate aminotransferase, cytoplasmic	join(81996..82141,82192..82435,82580..82996,83028..83453)	Theileria orientalis strain Shintoku	20714218
TOT_020000032	CDS	TOT_020000032	NC_025261.1	83555	84405	D	ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain containing protein; uncharacterized protein	join(83555..84014,84074..84405)	Theileria orientalis strain Shintoku	20714219
TOT_020000033	CDS	TOT_020000033	NC_025261.1	84568	85282	R	putative peptidyl-prolyl cis-trans isomerase taCyP	complement(join(84568..84758,84788..84905,84965..85282))	Theileria orientalis strain Shintoku	20714220
TOT_020000034	CDS	TOT_020000034	NC_025261.1	85856	86436	D	nuclear transport factor 2 domain containing protein; uncharacterized protein	join(85856..85926,86000..86175,86230..86310,86402..86436)	Theileria orientalis strain Shintoku	20714221
TOT_020000035	CDS	TOT_020000035	NC_025261.1	86861	92204	D	conserved hypothetical protein	join(86861..87023,87056..87088,87204..87497,87539..87733,87980..88107,88348..89878,89959..92204)	Theileria orientalis strain Shintoku	20714222
TOT_020000036	CDS	TOT_020000036	NC_025261.1	92425	97749	R	phosphatidylinositol-4-phosphate 5-kinase family protein; uncharacterized protein	complement(join(92425..92941,93032..93859,94031..94678,94748..95011,95051..95775,95866..97094,97242..97749))	Theileria orientalis strain Shintoku	20714223
TOT_020000037	CDS	TOT_020000037	NC_025261.1	98314	99486	D	actin II	join(98314..98422,98454..98553,98595..99486)	Theileria orientalis strain Shintoku	20714224
TOT_020000038	CDS	TOT_020000038	NC_025261.1	99760	100878	R	deoxyhypusine synthase	complement(99760..100878)	Theileria orientalis strain Shintoku	20714225
TOT_020000039	CDS	TOT_020000039	NC_025261.1	101371	104037	D	AAA ATPase, core domain containing protein; uncharacterized protein	join(101371..103279,103344..103856,103886..104037)	Theileria orientalis strain Shintoku	20714226
TOT_020001018	CDS	TOT_020001018	NC_025261.1	104193	105969	R	glycylpeptide N-tetradecanoyltransferase 1	complement(join(104193..104291,104321..104663,104745..104815,104850..104924,104957..105043,105074..105247,105280..105429,105498..105569,105601..105648,105679..105969))	Theileria orientalis strain Shintoku	20715109
TOT_020000041	CDS	TOT_020000041	NC_025261.1	106331	108326	D	CS domain containing protein; uncharacterized protein	join(106331..107590,107623..107824,107856..107939,107978..108048,108117..108326)	Theileria orientalis strain Shintoku	20714227
TOT_020000042	CDS	TOT_020000042	NC_025261.1	108532	109587	R	inorganic pyrophosphatase	complement(join(108532..109286,109371..109587))	Theileria orientalis strain Shintoku	20714228
TOT_020000043	CDS	TOT_020000043	NC_025261.1	110122	112313	D	conserved hypothetical protein	join(110122..112116,112203..112313)	Theileria orientalis strain Shintoku	20714229
TOT_020000044	CDS	TOT_020000044	NC_025261.1	112359	113819	D	acyl carrier protein-like domain containing protein; uncharacterized protein	join(112359..112392,112440..112653,112688..113819)	Theileria orientalis strain Shintoku	20714230
TOT_020000045	CDS	TOT_020000045	NC_025261.1	114029	114421	R	40S ribosomal protein S15A	complement(114029..114421)	Theileria orientalis strain Shintoku	20714231
TOT_020000046	CDS	TOT_020000046	NC_025261.1	114760	115646	R	hypothetical protein	complement(join(114760..114801,115281..115646))	Theileria orientalis strain Shintoku	20714232
TOT_020001019	CDS	TOT_020001019	NC_025261.1	116314	117128	D	TB2/DP1 and HVA22 related protein family protein; uncharacterized protein	join(116314..116883,116949..117128)	Theileria orientalis strain Shintoku	20715110
TOT_020000048	CDS	TOT_020000048	NC_025261.1	117169	117845	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(117169..117381,117411..117479,117532..117761,117794..117845))	Theileria orientalis strain Shintoku	20714233
TOT_020000049	CDS	TOT_020000049	NC_025261.1	118237	119058	D	zinc finger, FYVE-type domain containing protein; uncharacterized protein	118237..119058	Theileria orientalis strain Shintoku	20714234
TOT_020000050	CDS	TOT_020000050	NC_025261.1	119220	122803	R	prefoldin domain containing protein; uncharacterized protein	complement(join(119220..119513,119837..122803))	Theileria orientalis strain Shintoku	20714235
TOT_020001020	CDS	TOT_020001020	NC_025261.1	124421	125424	D	conserved hypothetical protein	join(124421..124822,124895..125260,125296..125424)	Theileria orientalis strain Shintoku	20715111
TOT_020001021	CDS	TOT_020001021	NC_025261.1	125645	126997	D	conserved hypothetical protein	join(125645..126661,126692..126997)	Theileria orientalis strain Shintoku	20715112
TOT_020001022	CDS	TOT_020001022	NC_025261.1	127665	128955	D	1-deoxy-D-xylulose 5-phosphate reducto-isomerase	join(127665..127843,127874..128858,128893..128955)	Theileria orientalis strain Shintoku	20715113
TOT_020000054	CDS	TOT_020000054	NC_025261.1	129044	130566	R	conserved hypothetical protein	complement(join(129044..129730,129771..129863,129896..130084,130120..130255,130298..130566))	Theileria orientalis strain Shintoku	20714236
TOT_020000055	CDS	TOT_020000055	NC_025261.1	130805	133915	D	Pep3/Vps18/deep orange domain containing protein; uncharacterized protein	join(130805..131018,131051..131853,131885..132044,132074..133296,133328..133497,133585..133915)	Theileria orientalis strain Shintoku	20714237
TOT_020000056	CDS	TOT_020000056	NC_025261.1	133997	135097	R	homeodomain-like containing protein	complement(join(133997..134218,134245..134424,134459..134519,134550..134611,134645..134754,134784..134915,134959..135097))	Theileria orientalis strain Shintoku	20714238
TOT_020000057	CDS	TOT_020000057	NC_025261.1	135378	136856	D	proteinase inhibitor I14/I15, hirudin/antistatin domain containing protein; uncharacterized protein	join(135378..136310,136356..136856)	Theileria orientalis strain Shintoku	20714239
TOT_020000058	CDS	TOT_020000058	NC_025261.1	136914	137073	R	hypothetical protein	complement(join(136914..137013,137021..137073))	Theileria orientalis strain Shintoku	20714240
TOT_020000059	CDS	TOT_020000059	NC_025261.1	137320	137837	D	60S ribosomal protein L27	join(137320..137570,137611..137724,137756..137837)	Theileria orientalis strain Shintoku	20714241
TOT_020000060	CDS	TOT_020000060	NC_025261.1	138035	140541	R	conserved hypothetical protein	complement(join(138035..138918,139218..139892,139989..140541))	Theileria orientalis strain Shintoku	20714242
TOT_020000061	CDS	TOT_020000061	NC_025261.1	140854	141752	R	conserved hypothetical protein	complement(join(140854..141062,141097..141142,141182..141516,141584..141752))	Theileria orientalis strain Shintoku	20714243
TOT_020000062	CDS	TOT_020000062	NC_025261.1	142546	142902	D	ribosomal protein L29	join(142546..142581,142679..142744,142828..142902)	Theileria orientalis strain Shintoku	20714244
TOT_020000063	CDS	TOT_020000063	NC_025261.1	142976	143190	D	hypothetical protein	join(142976..143033,143063..143190)	Theileria orientalis strain Shintoku	20714245
TOT_020000064	CDS	TOT_020000064	NC_025261.1	143402	144720	D	conserved hypothetical protein	join(143402..143530,143720..143980,144019..144172,144458..144720)	Theileria orientalis strain Shintoku	20714246
TOT_020000065	CDS	TOT_020000065	NC_025261.1	145054	145161	D	hypothetical protein	145054..145161	Theileria orientalis strain Shintoku	20714247
TOT_020000066	CDS	TOT_020000066	NC_025261.1	145363	146502	R	60S ribosomal protein L5	complement(join(145363..146204,146430..146502))	Theileria orientalis strain Shintoku	20714248
TOT_020000067	CDS	TOT_020000067	NC_025261.1	147727	148533	D	60S ribosomal protein L7a	147727..148533	Theileria orientalis strain Shintoku	20714249
TOT_020000068	CDS	TOT_020000068	NC_025261.1	150660	150800	D	hypothetical protein	150660..150800	Theileria orientalis strain Shintoku	20714250
TOT_020000069	CDS	TOT_020000069	NC_025261.1	150994	151964	R	conserved hypothetical protein	complement(join(150994..151201,151228..151378,151532..151625,151656..151964))	Theileria orientalis strain Shintoku	20714251
TOT_020000070	CDS	TOT_020000070	NC_025261.1	152292	154236	D	Las1-like family protein; uncharacterized protein	join(152292..152530,152577..152771,152807..153310,153345..154236)	Theileria orientalis strain Shintoku	20714252
TOT_020000071	CDS	TOT_020000071	NC_025261.1	155024	156763	D	zinc finger, CCCH-type domain containing protein; uncharacterized protein	155024..156763	Theileria orientalis strain Shintoku	20714253
TOT_020000072	CDS	TOT_020000072	NC_025261.1	156801	158448	D	arginine N-methyltransferase	join(156801..156852,156937..157185,157239..157567,157597..157674,157713..157844,157920..158229,158402..158448)	Theileria orientalis strain Shintoku	20714254
TOT_020000073	CDS	TOT_020000073	NC_025261.1	158670	159152	R	60S ribosomal protein L21	complement(158670..159152)	Theileria orientalis strain Shintoku	20714255
TOT_020000074	CDS	TOT_020000074	NC_025261.1	159678	160172	R	transcription factor	complement(159678..160172)	Theileria orientalis strain Shintoku	20714256
TOT_020000075	CDS	TOT_020000075	NC_025261.1	160756	161680	D	WW/Rsp5/WWP domain containing protein; uncharacterized protein	join(160756..161040,161072..161185,161234..161680)	Theileria orientalis strain Shintoku	20714257
TOT_020000076	CDS	TOT_020000076	NC_025261.1	161776	163717	R	hypothetical protein	complement(join(161776..161797,161889..163717))	Theileria orientalis strain Shintoku	20714258
TOT_020000077	CDS	TOT_020000077	NC_025261.1	164728	165753	R	hypothetical protein	complement(164728..165753)	Theileria orientalis strain Shintoku	20714259
TOT_020000078	CDS	TOT_020000078	NC_025261.1	166051	166914	R	predicted protein	complement(join(166051..166296,166446..166646,166693..166914))	Theileria orientalis strain Shintoku	20714260
TOT_020000079	CDS	TOT_020000079	NC_025261.1	167479	168279	R	50S ribosomal protein L24	complement(join(167479..167601,167636..167712,167754..167821,167861..167967,168001..168279))	Theileria orientalis strain Shintoku	20714261
TOT_020000080	CDS	TOT_020000080	NC_025261.1	168638	171335	R	replication factor-A protein 1	complement(join(168638..168730,168752..168898,168932..169048,169071..169143,169176..169262,169294..169369,169402..169522,169552..169664,169857..169998,170028..170273,170304..170372,170403..170475,170506..170703,170735..170766,170798..170894,170929..171066,171178..171335))	Theileria orientalis strain Shintoku	20714262
TOT_020000081	CDS	TOT_020000081	NC_025261.1	171434	172965	R	molecular chaperone DnaJ	complement(join(171434..172195,172227..172274,172307..172440,172470..172558,172592..172965))	Theileria orientalis strain Shintoku	20714263
TOT_020000082	CDS	TOT_020000082	NC_025261.1	173793	175298	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(173793..174610,174647..175298))	Theileria orientalis strain Shintoku	20714264
TOT_020000083	CDS	TOT_020000083	NC_025261.1	175727	177813	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(175727..176517,176595..177813))	Theileria orientalis strain Shintoku	20714265
TOT_020000084	CDS	TOT_020000084	NC_025261.1	178392	179806	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(178392..179182,179260..179806))	Theileria orientalis strain Shintoku	20714266
TOT_020000085	CDS	TOT_020000085	NC_025261.1	180300	181946	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(180300..180346,180381..181160,181253..181946))	Theileria orientalis strain Shintoku	20714267
TOT_020000086	CDS	TOT_020000086	NC_025261.1	182490	182648	R	hypothetical protein	complement(182490..182648)	Theileria orientalis strain Shintoku	20714268
TOT_020000087	CDS	TOT_020000087	NC_025261.1	183543	183815	R	conserved hypothetical protein	complement(join(183543..183594,183655..183815))	Theileria orientalis strain Shintoku	20714269
TOT_020000088	CDS	TOT_020000088	NC_025261.1	183853	184947	R	zinc finger, U1-type domain containing protein; uncharacterized protein	complement(183853..184947)	Theileria orientalis strain Shintoku	20714270
TOT_020000089	CDS	TOT_020000089	NC_025261.1	185144	186248	D	3'-5' exonuclease domain containing protein; uncharacterized protein	join(185144..185278,185316..185418,185462..185649,185925..186248)	Theileria orientalis strain Shintoku	20714271
TOT_020000090	CDS	TOT_020000090	NC_025261.1	186358	187807	R	conserved hypothetical protein	complement(join(186358..186424,186481..186789,186824..186977,187014..187273,187398..187554,187594..187620,187663..187807))	Theileria orientalis strain Shintoku	20714272
TOT_020000091	CDS	TOT_020000091	NC_025261.1	187908	188837	D	integral membrane protein	187908..188837	Theileria orientalis strain Shintoku	20714273
TOT_020000092	CDS	TOT_020000092	NC_025261.1	188872	189265	R	U6 snRNA-associated sm-like protein Lsm3	complement(join(188872..188946,188976..189071,189115..189200,189241..189265))	Theileria orientalis strain Shintoku	20714274
TOT_020000093	CDS	TOT_020000093	NC_025261.1	189404	191849	D	long-chain acyl-CoA synthetase	join(189404..189518,189551..189635,189667..190564,190713..191285,191436..191849)	Theileria orientalis strain Shintoku	20714275
TOT_020000094	CDS	TOT_020000094	NC_025261.1	192078	194227	R	conserved hypothetical protein	complement(join(192078..193676,193711..193926,193967..194227))	Theileria orientalis strain Shintoku	20714276
TOT_020000095	CDS	TOT_020000095	NC_025261.1	194398	197548	R	conserved hypothetical protein	complement(join(194398..196039,196071..197259,197305..197548))	Theileria orientalis strain Shintoku	20714277
TOT_020000096	CDS	TOT_020000096	NC_025261.1	197994	199260	R	ubiquitin carboxyl-terminal hydrolase	complement(join(197994..198751,198808..198855,198888..198942,198973..199260))	Theileria orientalis strain Shintoku	20714278
TOT_020000097	CDS	TOT_020000097	NC_025261.1	199471	201576	D	conserved hypothetical protein	join(199471..200265,200331..200608,200954..201110,201213..201291,201326..201576)	Theileria orientalis strain Shintoku	20714279
TOT_020000098	CDS	TOT_020000098	NC_025261.1	201732	204960	R	replication licensing factor	complement(join(201732..203163,203224..203783,203841..204222,204298..204420,204530..204960))	Theileria orientalis strain Shintoku	20714280
TOT_020000099	CDS	TOT_020000099	NC_025261.1	205261	205946	R	conserved hypothetical protein	complement(join(205261..205364,205411..205587,205628..205787,205821..205946))	Theileria orientalis strain Shintoku	20714281
TOT_020000100	CDS	TOT_020000100	NC_025261.1	206428	208701	D	conserved hypothetical protein	206428..208701	Theileria orientalis strain Shintoku	20714282
TOT_020000101	CDS	TOT_020000101	NC_025261.1	208739	209181	R	hypothetical protein	complement(join(208739..208923,208955..209039,209071..209181))	Theileria orientalis strain Shintoku	20714283
TOT_020000102	CDS	TOT_020000102	NC_025261.1	209607	213990	D	SMC protein, N-terminal domain containing protein; uncharacterized protein	join(209607..209980,210050..210806,210882..211809,211906..213008,213099..213383,213497..213620,213692..213990)	Theileria orientalis strain Shintoku	20714284
TOT_020000103	CDS	TOT_020000103	NC_025261.1	214091	214855	D	conserved hypothetical protein	join(214091..214309,214344..214405,214464..214534,214566..214855)	Theileria orientalis strain Shintoku	20714285
TOT_020000104	CDS	TOT_020000104	NC_025261.1	214932	215535	D	hypothetical protein	join(214932..215093,215258..215437,215488..215535)	Theileria orientalis strain Shintoku	20714286
TOT_020000105	CDS	TOT_020000105	NC_025261.1	215976	220274	D	ATP-binding region, ATPase-like domain containing protein; uncharacterized protein	215976..220274	Theileria orientalis strain Shintoku	20714287
TOT_020000106	CDS	TOT_020000106	NC_025261.1	220473	220925	D	hypothetical protein	join(220473..220682,220836..220925)	Theileria orientalis strain Shintoku	20714288
TOT_020000107	CDS	TOT_020000107	NC_025261.1	220957	221377	R	hypothetical protein	complement(join(220957..221002,221223..221377))	Theileria orientalis strain Shintoku	20714289
TOT_020000108	CDS	TOT_020000108	NC_025261.1	221532	222344	D	zinc finger, CCCH-type domain containing protein; uncharacterized protein	221532..222344	Theileria orientalis strain Shintoku	20714290
TOT_020000109	CDS	TOT_020000109	NC_025261.1	222401	223281	R	Der1-like domain containing protein; uncharacterized protein	complement(join(222401..222428,222460..222612,222768..222907,222939..223032,223067..223281))	Theileria orientalis strain Shintoku	20714291
TOT_020000110	CDS	TOT_020000110	NC_025261.1	224641	226599	D	EGF-like region domain containing protein; uncharacterized protein	join(224641..224890,224923..225894,226256..226599)	Theileria orientalis strain Shintoku	20714292
TOT_020000111	CDS	TOT_020000111	NC_025261.1	226680	228254	R	eukaryotic translation initiation factor 4a	complement(join(226680..226821,226937..227414,227644..227881,227913..228254))	Theileria orientalis strain Shintoku	20714293
TOT_020000112	CDS	TOT_020000112	NC_025261.1	229191	230742	D	methionine-tRNA ligase	join(229191..229304,229343..229465,229496..229567,229597..229692,229724..229799,229857..229903,229934..230089,230119..230168,230203..230425,230560..230655,230689..230742)	Theileria orientalis strain Shintoku	20714294
TOT_020000113	CDS	TOT_020000113	NC_025261.1	230873	232150	R	conserved hypothetical protein	complement(230873..232150)	Theileria orientalis strain Shintoku	20714295
TOT_020000114	CDS	TOT_020000114	NC_025261.1	233522	234996	D	phosphoglycerate mutase domain containing protein; uncharacterized protein	join(233522..234102,234168..234252,234376..234645,234746..234823,234925..234996)	Theileria orientalis strain Shintoku	20714296
TOT_020000115	CDS	TOT_020000115	NC_025261.1	235062	237543	R	conserved hypothetical protein	complement(join(235062..235209,235241..235342,235468..235754,235810..235908,236044..236144,236171..236352,236385..236628,236711..236844,236876..237138,237169..237543))	Theileria orientalis strain Shintoku	20714297
TOT_020000116	CDS	TOT_020000116	NC_025261.1	238304	239317	D	conserved hypothetical protein	join(238304..238605,238641..238893,238925..239048,239157..239317)	Theileria orientalis strain Shintoku	20714298
TOT_020001023	CDS	TOT_020001023	NC_025261.1	239405	240975	R	DNA-damage inducible protein	complement(join(239405..239501,239622..239729,239769..240020,240062..240141,240243..240319,240387..240534,240572..240741,240777..240975))	Theileria orientalis strain Shintoku	20715114
TOT_020000118	CDS	TOT_020000118	NC_025261.1	241368	241772	R	conserved hypothetical protein	complement(241368..241772)	Theileria orientalis strain Shintoku	20714299
TOT_020000119	CDS	TOT_020000119	NC_025261.1	242217	245473	R	conserved hypothetical protein	complement(join(242217..242324,242496..242651,242681..242818,242858..243157,243193..243323,243394..243936,243948..244048,244206..244351,244383..244598,244629..244824,244854..244915,244945..245304,245339..245473))	Theileria orientalis strain Shintoku	20714300
TOT_020000120	CDS	TOT_020000120	NC_025261.1	245798	248988	D	conserved hypothetical protein	join(245798..245839,245880..246004,246036..246120,246154..246312,246363..246503,246535..246617,246679..246788,246859..247014,247115..247218,247289..247371,247402..247470,247526..247661,247725..247824,247918..248459,248764..248988)	Theileria orientalis strain Shintoku	20714301
TOT_020000121	CDS	TOT_020000121	NC_025261.1	249140	251549	R	conserved hypothetical protein	complement(join(249140..249193,249255..249482,249579..250773,250824..250919,250976..251217,251250..251549))	Theileria orientalis strain Shintoku	20714302
TOT_020000122	CDS	TOT_020000122	NC_025261.1	251856	253955	D	pyruvate kinase	251856..253955	Theileria orientalis strain Shintoku	20714303
TOT_020000123	CDS	TOT_020000123	NC_025261.1	254087	255142	R	conserved hypothetical protein	complement(254087..255142)	Theileria orientalis strain Shintoku	20714304
TOT_020000124	CDS	TOT_020000124	NC_025261.1	255486	256342	D	RNA-binding S4 domain containing protein; uncharacterized protein	join(255486..255563,255599..255766,255806..255952,255987..256181,256214..256342)	Theileria orientalis strain Shintoku	20714305
TOT_020000125	CDS	TOT_020000125	NC_025261.1	257189	258892	R	conserved hypothetical protein	complement(257189..258892)	Theileria orientalis strain Shintoku	20714306
TOT_020000126	CDS	TOT_020000126	NC_025261.1	258995	260578	R	protein kinase	complement(join(258995..260073,260130..260442,260486..260578))	Theileria orientalis strain Shintoku	20714307
TOT_020000127	CDS	TOT_020000127	NC_025261.1	260928	262348	R	cysteine proteinase	complement(join(260928..261001,261139..262348))	Theileria orientalis strain Shintoku	20714308
TOT_020000128	CDS	TOT_020000128	NC_025261.1	262441	262601	R	hypothetical protein	complement(join(262441..262581,262590..262601))	Theileria orientalis strain Shintoku	20714309
TOT_020000129	CDS	TOT_020000129	NC_025261.1	263237	264142	R	putative ADP/ATP transporter	complement(263237..264142)	Theileria orientalis strain Shintoku	20714310
TOT_020000131	CDS	TOT_020000131	NC_025261.1	264768	265571	D	ubiquitin	join(264768..264873,264992..265125,265214..265286,265325..265482,265527..265571)	Theileria orientalis strain Shintoku	20714311
TOT_020000132	CDS	TOT_020000132	NC_025261.1	265812	268294	D	dynamin, GTPase region domain containing protein; uncharacterized protein	join(265812..266009,266041..266519,266549..266699,266729..267196,267304..267456,267486..267625,267686..267812,267852..267988,268021..268197,268234..268294)	Theileria orientalis strain Shintoku	20714312
TOT_020000133	CDS	TOT_020000133	NC_025261.1	268399	271046	D	DNA repair helicase	join(268399..268659,268691..268822,268861..269077,269109..269352,269391..270240,270341..270447,270480..270630,270693..271046)	Theileria orientalis strain Shintoku	20714313
TOT_020000134	CDS	TOT_020000134	NC_025261.1	271094	271847	D	conserved hypothetical protein	join(271094..271306,271346..271486,271530..271847)	Theileria orientalis strain Shintoku	20714314
TOT_020000135	CDS	TOT_020000135	NC_025261.1	271975	275316	R	histone acethyltransferase-like protein	complement(join(271975..272474,272598..272705,272863..274108,274262..275012,275312..275316))	Theileria orientalis strain Shintoku	20714315
TOT_020000136	CDS	TOT_020000136	NC_025261.1	275353	275865	D	conserved hypothetical protein	275353..275865	Theileria orientalis strain Shintoku	20714316
TOT_020000137	CDS	TOT_020000137	NC_025261.1	276599	278545	D	heat shock protein	276599..278545	Theileria orientalis strain Shintoku	20714317
TOT_020000138	CDS	TOT_020000138	NC_025261.1	278799	278981	R	hypothetical protein	complement(278799..278981)	Theileria orientalis strain Shintoku	20714318
TOT_020001024	CDS	TOT_020001024	NC_025261.1	279030	281153	R	possible RING-finger-like protein	complement(join(279030..279796,279941..281153))	Theileria orientalis strain Shintoku	20715115
TOT_020001025	CDS	TOT_020001025	NC_025261.1	281611	282895	R	conserved hypothetical protein	complement(join(281611..282394,282498..282895))	Theileria orientalis strain Shintoku	20715116
TOT_020001026	CDS	TOT_020001026	NC_025261.1	283195	284506	R	conserved hypothetical protein	complement(join(283195..284299,284334..284506))	Theileria orientalis strain Shintoku	20715117
TOT_020000142	CDS	TOT_020000142	NC_025261.1	284712	285997	R	conserved hypothetical protein	complement(join(284712..285676,285709..285997))	Theileria orientalis strain Shintoku	20714319
TOT_020000143	CDS	TOT_020000143	NC_025261.1	286240	286395	D	conserved hypothetical protein	286240..286395	Theileria orientalis strain Shintoku	20714320
TOT_020000144	CDS	TOT_020000144	NC_025261.1	286716	291150	D	DNA repair protein Rad50	join(286716..286838,286913..287092,287130..287195,287225..287266,287298..287382,287417..287507,287539..287574,287606..287675,287706..287773,287835..287951,287983..288088,288119..288217,288298..288419,288450..288675,288708..288798,288928..289110,289156..289186,289227..289309,289324..289415,289442..289572,289684..289767,289823..289972,290036..290140,290217..290306,290339..290372,290403..290568,290637..290712,290922..291150)	Theileria orientalis strain Shintoku	20714321
TOT_020000145	CDS	TOT_020000145	NC_025261.1	291675	292052	D	DNA repair protein Rad50	join(291675..291845,291876..292052)	Theileria orientalis strain Shintoku	20714322
TOT_020001027	CDS	TOT_020001027	NC_025261.1	292125	293138	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(292125..292815,292850..293025,293061..293138))	Theileria orientalis strain Shintoku	20715118
TOT_020000147	CDS	TOT_020000147	NC_025261.1	293373	294038	R	ubiquitin carrier protein	complement(join(293373..293602,293711..293819,293854..293914,293956..294038))	Theileria orientalis strain Shintoku	20714323
TOT_020000148	CDS	TOT_020000148	NC_025261.1	294554	298929	D	coatomer complex subunit alpha	join(294554..296500,296548..296931,297035..297152,297332..297406,297438..297603,297750..298929)	Theileria orientalis strain Shintoku	20714324
TOT_020000149	CDS	TOT_020000149	NC_025261.1	298978	299439	R	conserved hypothetical protein	complement(join(298978..299034,299210..299274,299307..299439))	Theileria orientalis strain Shintoku	20714325
TOT_020000150	CDS	TOT_020000150	NC_025261.1	299799	300049	D	hypothetical protein	join(299799..299924,299996..300049)	Theileria orientalis strain Shintoku	20714326
TOT_020000151	CDS	TOT_020000151	NC_025261.1	300880	303222	D	conserved hypothetical protein	300880..303222	Theileria orientalis strain Shintoku	20714327
TOT_020000152	CDS	TOT_020000152	NC_025261.1	303351	306108	D	HSP40/DnaJ peptide-binding domain containing protein; uncharacterized protein	join(303351..305953,306090..306108)	Theileria orientalis strain Shintoku	20714328
TOT_020000153	CDS	TOT_020000153	NC_025261.1	306205	310623	D	5'-3' exoribonuclease 2	join(306205..307110,307192..307809,307957..308361,308428..310623)	Theileria orientalis strain Shintoku	20714329
TOT_020000154	CDS	TOT_020000154	NC_025261.1	310680	314315	R	membrane attack complex component/perforin/complement C9 family protein; uncharacterized protein	complement(join(310680..311003,311036..311127,311133..311226,311258..311366,311398..311540,311572..311996,312030..312238,312272..312471,312502..312701,313121..313968,314245..314315))	Theileria orientalis strain Shintoku	20714330
TOT_020000155	CDS	TOT_020000155	NC_025261.1	314347	315834	D	phenylalanyl-tRNA synthetase	join(314347..314953,314987..315834)	Theileria orientalis strain Shintoku	20714331
TOT_020000156	CDS	TOT_020000156	NC_025261.1	315921	320780	R	C2 calcium-dependent membrane targeting domain containing protein; uncharacterized protein	complement(join(315921..317460,317587..317810,317870..320154,320185..320566,320598..320780))	Theileria orientalis strain Shintoku	20714332
TOT_020000157	CDS	TOT_020000157	NC_025261.1	321123	322773	R	dihydroorotate dehydrogenase, mitochondrial precursor	complement(join(321123..321172,321210..321276,321313..321393,321424..321570,321606..321650,321683..321724,321763..322022,322055..322152,322192..322366,322402..322645,322681..322773))	Theileria orientalis strain Shintoku	20714333
TOT_020000158	CDS	TOT_020000158	NC_025261.1	322834	325767	R	N-ethylmaleimide-sensitive factor	complement(join(322834..323013,323076..323435,323564..323959,324091..324312,324344..324388,324425..324637,324743..324828,324869..325152,325184..325546,325583..325671,325705..325767))	Theileria orientalis strain Shintoku	20714334
TOT_020000159	CDS	TOT_020000159	NC_025261.1	325835	329475	R	conserved hypothetical protein	complement(join(325835..326156,326287..326512,326717..326887,327008..327751,328100..329260,329427..329475))	Theileria orientalis strain Shintoku	20714335
TOT_020000160	CDS	TOT_020000160	NC_025261.1	329950	333876	R	importin-beta, N-terminal domain containing protein; uncharacterized protein	complement(join(329950..330533,330762..333876))	Theileria orientalis strain Shintoku	20714336
TOT_020000161	CDS	TOT_020000161	NC_025261.1	335120	335397	D	hypothetical protein	join(335120..335177,335342..335397)	Theileria orientalis strain Shintoku	20714337
TOT_020000162	CDS	TOT_020000162	NC_025261.1	335813	338445	D	protein kinase	join(335813..337154,337246..337557,337658..338445)	Theileria orientalis strain Shintoku	20714338
TOT_020000163	CDS	TOT_020000163	NC_025261.1	338548	342558	D	protein of unknown function DUF207 family protein; uncharacterized protein	join(338548..341651,341841..342558)	Theileria orientalis strain Shintoku	20714339
TOT_020001028	CDS	TOT_020001028	NC_025261.1	342617	343170	D	Os04g0663300 protein; uncharacterized protein	join(342617..342671,342815..342927,342997..343170)	Theileria orientalis strain Shintoku	20715119
TOT_020000165	CDS	TOT_020000165	NC_025261.1	343459	347624	D	translation initiation factor IF-2	join(343459..343558,343634..343692,343724..343765,343799..343873,343932..344260,344379..344692,344732..344827,344869..345107,345320..345862,346014..346811,347000..347066,347162..347304,347574..347624)	Theileria orientalis strain Shintoku	20714340
TOT_020000166	CDS	TOT_020000166	NC_025261.1	347789	350058	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(347789..348739,348831..348854,348929..349531,349750..350058))	Theileria orientalis strain Shintoku	20714341
TOT_020000167	CDS	TOT_020000167	NC_025261.1	350424	353338	R	SPX, N-terminal domain containing protein; uncharacterized protein	complement(join(350424..350573,350609..350789,350819..350947,350979..351068,351099..351171,351204..351475,351506..351649,351801..353338))	Theileria orientalis strain Shintoku	20714342
TOT_020000168	CDS	TOT_020000168	NC_025261.1	353683	355367	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(353683..353767,353818..353926,353960..354062,354123..354298,354335..354403,354441..354508,354546..354615,354671..354736,354780..354952,355237..355367)	Theileria orientalis strain Shintoku	20714343
TOT_020000169	CDS	TOT_020000169	NC_025261.1	355382	358763	R	conserved hypothetical protein	complement(join(355382..355469,355843..358763))	Theileria orientalis strain Shintoku	20714344
TOT_020000170	CDS	TOT_020000170	NC_025261.1	359272	362008	D	conserved hypothetical protein	join(359272..359455,359496..359735,359767..359976,360008..360069,360102..360165,360196..360253,360337..360772,360947..361332,361366..361508,361546..361629,361661..361742,361785..361861,361902..362008)	Theileria orientalis strain Shintoku	20714345
TOT_020001029	CDS	TOT_020001029	NC_025261.1	362465	365350	D	GYF domain containing protein; uncharacterized protein	join(362465..364041,364291..364750,364856..365350)	Theileria orientalis strain Shintoku	20715120
TOT_020000172	CDS	TOT_020000172	NC_025261.1	365681	366624	R	50S ribosomal protein L24	complement(join(365681..365743,365779..365972,366001..366047,366078..366163,366195..366290,366337..366624))	Theileria orientalis strain Shintoku	20714346
TOT_020000173	CDS	TOT_020000173	NC_025261.1	366744	367877	R	conserved hypothetical protein	complement(join(366744..367362,367438..367877))	Theileria orientalis strain Shintoku	20714347
TOT_020001030	CDS	TOT_020001030	NC_025261.1	368401	369736	D	cyclin-like protein	join(368401..368556,368588..369099,369131..369220,369347..369524,369559..369639,369671..369736)	Theileria orientalis strain Shintoku	20715121
TOT_020000175	CDS	TOT_020000175	NC_025261.1	369785	370941	R	serine/threonine protein kinase	complement(join(369785..370133,370164..370496,370529..370600,370664..370758,370819..370941))	Theileria orientalis strain Shintoku	20714348
TOT_020000176	CDS	TOT_020000176	NC_025261.1	371159	371940	D	acylphosphatase domain containing protein; uncharacterized protein	join(371159..371458,371540..371590,371622..371749,371853..371940)	Theileria orientalis strain Shintoku	20714349
TOT_020001031	CDS	TOT_020001031	NC_025261.1	371986	373815	R	erythrocyte membrane-associated malaria antigen-like	complement(join(371986..372115,372180..372381,372460..372782,372864..373149,373181..373374,373406..373815))	Theileria orientalis strain Shintoku	20715122
TOT_020000178	CDS	TOT_020000178	NC_025261.1	374582	375778	D	conserved hypothetical protein	374582..375778	Theileria orientalis strain Shintoku	20714350
TOT_020000179	CDS	TOT_020000179	NC_025261.1	375816	376544	R	glutaredoxin-like protein grla	complement(join(375816..375905,375940..376251,376290..376382,376419..376544))	Theileria orientalis strain Shintoku	20714351
TOT_020001032	CDS	TOT_020001032	NC_025261.1	376672	377616	D	3-demethylubiquinone-9 3-methyltransferase-like protein	376672..377616	Theileria orientalis strain Shintoku	20715123
TOT_020000180	CDS	TOT_020000180	NC_025261.1	377591	378151	D	conserved hypothetical protein	join(377591..377674,377712..378030,378063..378151)	Theileria orientalis strain Shintoku	20714352
TOT_020000181	CDS	TOT_020000181	NC_025261.1	379178	383124	R	DNA topoisomerase I	complement(join(379178..379388,379608..379690,379881..380615,380675..380755,380942..381156,381323..383066,383107..383124))	Theileria orientalis strain Shintoku	20714353
TOT_020000182	CDS	TOT_020000182	NC_025261.1	383265	385724	D	Bromodomain containing protein; uncharacterized protein	join(383265..383306,383449..383592,383642..383796,383826..385670,385709..385724)	Theileria orientalis strain Shintoku	20714354
TOT_020000183	CDS	TOT_020000183	NC_025261.1	385852	388667	R	1-phosphatidylinositol-4-phosphate 5-kinase	complement(join(385852..388456,388543..388667))	Theileria orientalis strain Shintoku	20714355
TOT_020000184	CDS	TOT_020000184	NC_025261.1	389009	389193	D	hypothetical protein	join(389009..389093,389126..389193)	Theileria orientalis strain Shintoku	20714356
TOT_020000185	CDS	TOT_020000185	NC_025261.1	389278	390532	R	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	complement(join(389278..389511,389556..389740,389851..389991,390024..390158,390192..390288,390386..390532))	Theileria orientalis strain Shintoku	20714357
TOT_020000186	CDS	TOT_020000186	NC_025261.1	390726	391169	D	conserved hypothetical protein	390726..391169	Theileria orientalis strain Shintoku	20714358
TOT_020000187	CDS	TOT_020000187	NC_025261.1	391241	392260	D	transcription initiation factor TFIIb	391241..392260	Theileria orientalis strain Shintoku	20714359
TOT_020000188	CDS	TOT_020000188	NC_025261.1	392320	392868	R	conserved hypothetical protein	complement(392320..392868)	Theileria orientalis strain Shintoku	20714360
TOT_020000189	CDS	TOT_020000189	NC_025261.1	393015	394540	D	bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein; uncharacterized protein	join(393015..393480,393510..393706,393778..393906,393948..394043,394156..394236,394304..394540)	Theileria orientalis strain Shintoku	20714361
TOT_020000190	CDS	TOT_020000190	NC_025261.1	394618	395265	D	conserved hypothetical protein	join(394618..394685,394804..394927,394982..395110,395191..395265)	Theileria orientalis strain Shintoku	20714362
TOT_020000191	CDS	TOT_020000191	NC_025261.1	395589	396272	D	DNA-directed RNA polymerase 2 subunit	join(395589..395617,395738..395881,395945..396272)	Theileria orientalis strain Shintoku	20714363
TOT_020000192	CDS	TOT_020000192	NC_025261.1	396418	396869	R	Erv1/Alr domain containing protein; uncharacterized protein	complement(join(396418..396654,396714..396869))	Theileria orientalis strain Shintoku	20714364
TOT_020000193	CDS	TOT_020000193	NC_025261.1	396881	398026	R	conserved hypothetical protein	complement(join(396881..397105,397429..397503,397562..397631,397718..397854,397889..398026))	Theileria orientalis strain Shintoku	20714365
TOT_020000194	CDS	TOT_020000194	NC_025261.1	398514	399335	D	conserved hypothetical protein	join(398514..398746,398780..398849,398881..399235,399325..399335)	Theileria orientalis strain Shintoku	20714366
TOT_020000195	CDS	TOT_020000195	NC_025261.1	399374	401457	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(399374..400132,400678..401457))	Theileria orientalis strain Shintoku	20714367
TOT_020000196	CDS	TOT_020000196	NC_025261.1	401940	402725	R	conserved hypothetical protein	complement(401940..402725)	Theileria orientalis strain Shintoku	20714368
TOT_020000197	CDS	TOT_020000197	NC_025261.1	403215	403973	R	conserved hypothetical protein	complement(403215..403973)	Theileria orientalis strain Shintoku	20714369
TOT_020000198	CDS	TOT_020000198	NC_025261.1	404317	405126	R	conserved hypothetical protein	complement(404317..405126)	Theileria orientalis strain Shintoku	20714370
TOT_020000199	CDS	TOT_020000199	NC_025261.1	405981	406543	D	maternal g10 transcript	join(405981..406232,406343..406543)	Theileria orientalis strain Shintoku	20714371
TOT_020000200	CDS	TOT_020000200	NC_025261.1	406877	408840	R	mitochondrial processing peptidase subunit alpha	complement(join(406877..407312,407384..407606,407717..408049,408158..408674,408778..408840))	Theileria orientalis strain Shintoku	20714372
TOT_020000201	CDS	TOT_020000201	NC_025261.1	408971	411661	D	conserved hypothetical protein	join(408971..409080,409135..411661)	Theileria orientalis strain Shintoku	20714373
TOT_020000202	CDS	TOT_020000202	NC_025261.1	411812	412324	R	conserved hypothetical protein	complement(join(411812..412042,412151..412324))	Theileria orientalis strain Shintoku	20714374
TOT_020000203	CDS	TOT_020000203	NC_025261.1	412508	413139	R	hypothetical protein	complement(join(412508..412614,413091..413139))	Theileria orientalis strain Shintoku	20714375
TOT_020000204	CDS	TOT_020000204	NC_025261.1	413148	414833	D	molecular chaperone DnaJ	413148..414833	Theileria orientalis strain Shintoku	20714376
TOT_020000205	CDS	TOT_020000205	NC_025261.1	414942	416685	R	ribosomal protein S29	complement(join(414942..415168,415311..415373,415663..415741,415772..415836,415936..416053,416086..416128,416272..416336,416413..416512,416606..416685))	Theileria orientalis strain Shintoku	20714377
TOT_020001033	CDS	TOT_020001033	NC_025261.1	416984	418267	R	transporter protein cg10	complement(416984..418267)	Theileria orientalis strain Shintoku	20715124
TOT_020000207	CDS	TOT_020000207	NC_025261.1	418936	420535	D	conserved hypothetical protein	join(418936..419220,419285..419476,419586..419685,419752..419945,420041..420535)	Theileria orientalis strain Shintoku	20714378
TOT_020000208	CDS	TOT_020000208	NC_025261.1	420952	421674	D	conserved hypothetical protein	420952..421674	Theileria orientalis strain Shintoku	20714379
TOT_020000209	CDS	TOT_020000209	NC_025261.1	422102	423558	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(422102..422221,422427..422488,422558..422629,422660..422717,422819..423188,423286..423353,423385..423558))	Theileria orientalis strain Shintoku	20714380
TOT_020000210	CDS	TOT_020000210	NC_025261.1	424103	425324	D	syntaxin, N-terminal domain containing protein; uncharacterized protein	join(424103..424219,424311..424817,424939..425008,425080..425324)	Theileria orientalis strain Shintoku	20714381
TOT_020000211	CDS	TOT_020000211	NC_025261.1	425572	426536	D	Machado-Joseph disease protein MJD family protein; uncharacterized protein	join(425572..425652,425764..425845,425912..425976,426081..426229,426350..426536)	Theileria orientalis strain Shintoku	20714382
TOT_020000212	CDS	TOT_020000212	NC_025261.1	426656	430326	D	Armadillo-like helical domain containing protein; uncharacterized protein	join(426656..426703,426744..426866,427043..427726,427873..428073,428092..430326)	Theileria orientalis strain Shintoku	20714383
TOT_020000213	CDS	TOT_020000213	NC_025261.1	430373	430613	R	hypothetical protein	complement(join(430373..430468,430539..430613))	Theileria orientalis strain Shintoku	20714384
TOT_020000214	CDS	TOT_020000214	NC_025261.1	431029	432843	D	conserved hypothetical protein	431029..432843	Theileria orientalis strain Shintoku	20714385
TOT_020000215	CDS	TOT_020000215	NC_025261.1	433276	440011	R	glutathione S-transferase, C-terminal-like domain containing protein; uncharacterized protein	complement(join(433276..433759,433832..434019,434139..434422,434498..434675,434907..435053,435110..435381,435413..435546,435741..436739,437052..438357,438463..440011))	Theileria orientalis strain Shintoku	20714386
TOT_020000216	CDS	TOT_020000216	NC_025261.1	440344	440502	D	hypothetical protein	440344..440502	Theileria orientalis strain Shintoku	20714387
TOT_020000217	CDS	TOT_020000217	NC_025261.1	440590	441102	R	glycine cleavage H-protein family protein; uncharacterized protein	complement(440590..441102)	Theileria orientalis strain Shintoku	20714388
TOT_020000218	CDS	TOT_020000218	NC_025261.1	441162	441600	R	60S ribosomal protein L37	complement(join(441162..441316,441480..441600))	Theileria orientalis strain Shintoku	20714389
TOT_020000998	CDS	TOT_020000998	NC_025261.1	441975	444097	R	conserved hypothetical protein	complement(join(441975..442151,442186..442230,442336..442441,442502..442572,442607..442725,442818..442956,443067..443891,444035..444097))	Theileria orientalis strain Shintoku	20715094
TOT_020000219	CDS	TOT_020000219	NC_025261.1	444278	444625	D	DNA-directed RNA polymerase subunit RPB10	join(444278..444372,444437..444531,444576..444625)	Theileria orientalis strain Shintoku	20714390
TOT_020000999	CDS	TOT_020000999	NC_025261.1	444684	445452	R	predicted protein	complement(join(444684..444788,444850..445452))	Theileria orientalis strain Shintoku	20715095
TOT_020000220	CDS	TOT_020000220	NC_025261.1	445594	448719	R	conserved hypothetical protein	complement(445594..448719)	Theileria orientalis strain Shintoku	20714391
TOT_020000221	CDS	TOT_020000221	NC_025261.1	448751	450378	R	conserved hypothetical protein	complement(join(448751..448808,448924..448998,449041..449153,449205..449299,449424..449564,449706..449876,449907..450378))	Theileria orientalis strain Shintoku	20714392
TOT_020000222	CDS	TOT_020000222	NC_025261.1	450394	451081	R	conserved hypothetical protein	complement(join(450394..450520,450591..450834,450891..450992,451027..451081))	Theileria orientalis strain Shintoku	20714393
TOT_020000223	CDS	TOT_020000223	NC_025261.1	451216	452058	D	protein kinase	join(451216..451263,451330..451737,451769..451819,451948..452058)	Theileria orientalis strain Shintoku	20714394
TOT_020001034	CDS	TOT_020001034	NC_025261.1	452206	453325	R	electron transport protein SCO1/SenC family protein; uncharacterized protein	complement(join(452206..452297,452390..452498,452604..452689,452719..452760,452793..452861,452902..453024,453102..453157,453190..453230,453263..453325))	Theileria orientalis strain Shintoku	20715125
TOT_020001035	CDS	TOT_020001035	NC_025261.1	453750	456902	R	heat shock protein	complement(join(453750..454902,455099..455208,455286..455530,455778..456360,456442..456649,456796..456902))	Theileria orientalis strain Shintoku	20715126
TOT_020000226	CDS	TOT_020000226	NC_025261.1	458011	461256	D	heat shock protein 90	join(458011..458080,458376..458974,459134..459670,460113..460613,460957..461256)	Theileria orientalis strain Shintoku	20714395
TOT_020001000	CDS	TOT_020001000	NC_025261.1	462001	462643	D	ADP-ribosylation factor	join(462001..462219,462271..462509,462556..462643)	Theileria orientalis strain Shintoku	20715096
TOT_020001036	CDS	TOT_020001036	NC_025261.1	462659	463504	D	0; Conserved hypothetical protein	462659..463504	Theileria orientalis strain Shintoku	20715127
TOT_020000227	CDS	TOT_020000227	NC_025261.1	463881	465852	D	conserved hypothetical protein	join(463881..464299,464355..464461,464491..464642,464714..464925,464955..465173,465324..465852)	Theileria orientalis strain Shintoku	20714396
TOT_020000228	CDS	TOT_020000228	NC_025261.1	466313	468564	R	nucleolar GTP-binding 1 domain containing protein; uncharacterized protein	complement(join(466313..466723,466857..467023,467174..467868,467898..468175,468290..468487,468532..468564))	Theileria orientalis strain Shintoku	20714397
TOT_020001037	CDS	TOT_020001037	NC_025261.1	469007	470191	D	conserved hypothetical protein	469007..470191	Theileria orientalis strain Shintoku	20715128
TOT_020000230	CDS	TOT_020000230	NC_025261.1	470423	472200	D	conserved hypothetical protein	join(470423..470476,470626..472200)	Theileria orientalis strain Shintoku	20714398
TOT_020000231	CDS	TOT_020000231	NC_025261.1	472307	475542	R	protein of unknown function DUF699, ATPase putative domain containing protein; uncharacterized protein	complement(join(472307..472434,472527..472701,472794..473647,473768..475097,475177..475542))	Theileria orientalis strain Shintoku	20714399
TOT_020000232	CDS	TOT_020000232	NC_025261.1	475986	476574	R	conserved hypothetical protein	complement(join(475986..476092,476268..476380,476412..476507,476543..476574))	Theileria orientalis strain Shintoku	20714400
TOT_020001038	CDS	TOT_020001038	NC_025261.1	476825	477390	D	ATP synthase delta chain, mitochondrial	join(476825..476954,476993..477317,477351..477390)	Theileria orientalis strain Shintoku	20715129
TOT_020000234	CDS	TOT_020000234	NC_025261.1	477398	477877	R	conserved hypothetical protein	complement(join(477398..477442,477474..477772,477805..477877))	Theileria orientalis strain Shintoku	20714401
TOT_020000235	CDS	TOT_020000235	NC_025261.1	477987	478733	R	hypothetical protein	complement(join(477987..478134,478204..478318,478367..478733))	Theileria orientalis strain Shintoku	20714402
TOT_020000236	CDS	TOT_020000236	NC_025261.1	479244	479531	D	hypothetical protein	join(479244..479313,479355..479439,479471..479531)	Theileria orientalis strain Shintoku	20714403
TOT_020000237	CDS	TOT_020000237	NC_025261.1	479789	479971	D	hypothetical protein	479789..479971	Theileria orientalis strain Shintoku	20714404
TOT_020000238	CDS	TOT_020000238	NC_025261.1	480253	483828	R	peptidase M16, C-terminal domain containing protein; uncharacterized protein	complement(480253..483828)	Theileria orientalis strain Shintoku	20714405
TOT_020000239	CDS	TOT_020000239	NC_025261.1	483982	488146	R	ion transport protein	complement(join(483982..484661,484713..484864,484894..485062,485093..485350,485380..485535,485653..485809,485842..485947,485982..486088,486184..486428,486460..486597,486628..486748,486759..487065,487095..487232,487263..487419,487769..487825,487864..488146))	Theileria orientalis strain Shintoku	20714406
TOT_020000240	CDS	TOT_020000240	NC_025261.1	488212	491766	R	falcilysin	complement(488212..491766)	Theileria orientalis strain Shintoku	20714407
TOT_020000241	CDS	TOT_020000241	NC_025261.1	492202	493788	D	zinc finger, MIZ-type domain containing protein; uncharacterized protein	join(492202..493411,493505..493788)	Theileria orientalis strain Shintoku	20714408
TOT_020000242	CDS	TOT_020000242	NC_025261.1	494114	494689	R	conserved hypothetical protein	complement(join(494114..494370,494402..494446,494476..494689))	Theileria orientalis strain Shintoku	20714409
TOT_020000243	CDS	TOT_020000243	NC_025261.1	494767	495717	R	conserved hypothetical protein	complement(494767..495717)	Theileria orientalis strain Shintoku	20714410
TOT_020000244	CDS	TOT_020000244	NC_025261.1	495751	498368	R	conserved hypothetical protein	complement(join(495751..496029,496129..496712,496832..498368))	Theileria orientalis strain Shintoku	20714411
TOT_020000245	CDS	TOT_020000245	NC_025261.1	498879	500168	R	conserved hypothetical protein	complement(498879..500168)	Theileria orientalis strain Shintoku	20714412
TOT_020000246	CDS	TOT_020000246	NC_025261.1	500313	502230	R	anthranilate synthase component II	complement(join(500313..500690,500722..501237,501299..501475,501506..501654,501685..501883,501913..502230))	Theileria orientalis strain Shintoku	20714413
TOT_020000247	CDS	TOT_020000247	NC_025261.1	502606	504908	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(502606..503061,503091..503238,503269..503364,503396..503533,503604..503728,503759..503854,503902..504033,504063..504133,504184..504312,504345..504483,504513..504908)	Theileria orientalis strain Shintoku	20714414
TOT_020000248	CDS	TOT_020000248	NC_025261.1	505157	505907	R	50S ribosomal protein L9	complement(join(505157..505611,505622..505907))	Theileria orientalis strain Shintoku	20714415
TOT_020000249	CDS	TOT_020000249	NC_025261.1	506027	507183	D	conserved hypothetical protein	join(506027..506146,506190..506315,506384..506423,506453..506531,506543..506827,506859..507183)	Theileria orientalis strain Shintoku	20714416
TOT_020000250	CDS	TOT_020000250	NC_025261.1	507345	509794	R	DNA polymerase epsilon subunit B domain containing protein; uncharacterized protein	complement(join(507345..507421,507454..507532,507563..507670,507705..507895,507928..507978,508019..508069,508102..508314,508344..508467,508569..508670,508701..508772,508803..508900,508930..509026,509141..509239,509274..509548,509581..509794))	Theileria orientalis strain Shintoku	20714417
TOT_020000251	CDS	TOT_020000251	NC_025261.1	509840	516164	R	conserved hypothetical protein	complement(join(509840..512896,512996..514009,514214..514384,514523..515835,515867..516164))	Theileria orientalis strain Shintoku	20714418
TOT_020000252	CDS	TOT_020000252	NC_025261.1	516555	518031	R	conserved hypothetical protein	complement(join(516555..516824,516857..517618,517675..517791,517821..517891,517923..518031))	Theileria orientalis strain Shintoku	20714419
TOT_020000253	CDS	TOT_020000253	NC_025261.1	518193	519804	R	heat shock protein DnaJ family protein; uncharacterized protein	complement(join(518193..518375,518382..518511,518541..518632,518662..518796,518911..519804))	Theileria orientalis strain Shintoku	20714420
TOT_020000254	CDS	TOT_020000254	NC_025261.1	520021	520797	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(520021..520080,520223..520356,520386..520569,520604..520708,520765..520797)	Theileria orientalis strain Shintoku	20714421
TOT_020000255	CDS	TOT_020000255	NC_025261.1	520809	521115	R	hypothetical protein	complement(join(520809..520958,520989..521051,521083..521115))	Theileria orientalis strain Shintoku	20714422
TOT_020000256	CDS	TOT_020000256	NC_025261.1	521300	521660	R	component of cytosolic 80S ribosome and 60S large subunit; ribosomal protein L39	complement(join(521300..521348,521397..521500,521658..521660))	Theileria orientalis strain Shintoku	20714423
TOT_020001039	CDS	TOT_020001039	NC_025261.1	521890	522425	D	hypothetical protein	join(521890..521963,522032..522217,522254..522425)	Theileria orientalis strain Shintoku	20715130
TOT_020000258	CDS	TOT_020000258	NC_025261.1	522669	526941	D	conserved hypothetical protein	join(522669..524415,524619..525551,525907..526655,526927..526941)	Theileria orientalis strain Shintoku	20714424
TOT_020000259	CDS	TOT_020000259	NC_025261.1	527765	527995	R	hypothetical protein	complement(join(527765..527884,527954..527995))	Theileria orientalis strain Shintoku	20714425
TOT_020000260	CDS	TOT_020000260	NC_025261.1	528623	529579	D	hypothetical protein	528623..529579	Theileria orientalis strain Shintoku	20714426
TOT_020000261	CDS	TOT_020000261	NC_025261.1	530153	530833	R	RNA binding motif protein 42	complement(530153..530833)	Theileria orientalis strain Shintoku	20714427
TOT_020000262	CDS	TOT_020000262	NC_025261.1	531295	532386	D	conserved hypothetical protein	join(531295..531303,531611..531655,531687..531728,531757..532386)	Theileria orientalis strain Shintoku	20714428
TOT_020000263	CDS	TOT_020000263	NC_025261.1	532486	535458	D	conserved hypothetical protein	532486..535458	Theileria orientalis strain Shintoku	20714429
TOT_020001040	CDS	TOT_020001040	NC_025261.1	535707	537844	R	protein of unknown function DUF747, CMV receptor family protein; uncharacterized protein	complement(join(535707..535932,536035..536289,536416..536742,536965..537480,537601..537704,537734..537844))	Theileria orientalis strain Shintoku	20715131
TOT_020001041	CDS	TOT_020001041	NC_025261.1	538428	540257	R	RNA helicase	complement(538428..540257)	Theileria orientalis strain Shintoku	20715132
TOT_020001042	CDS	TOT_020001042	NC_025261.1	540730	543001	R	endonuclease/exonuclease/phosphatase domain containing protein; uncharacterized protein	complement(join(540730..540837,540869..541095,541126..541444,541478..542699,542748..543001))	Theileria orientalis strain Shintoku	20715133
TOT_020000267	CDS	TOT_020000267	NC_025261.1	543213	543765	D	ubiquitin carrier protein	join(543213..543453,543488..543576,543607..543765)	Theileria orientalis strain Shintoku	20714430
TOT_020000268	CDS	TOT_020000268	NC_025261.1	543956	546090	R	T-complex protein 1 epsilon subunit	complement(join(543956..544478,544525..544775,544976..545125,545208..545348,545381..545516,545578..545825,545860..546090))	Theileria orientalis strain Shintoku	20714431
TOT_020000269	CDS	TOT_020000269	NC_025261.1	546374	547165	R	SEC22 homologue; vesicle trafficking protein-like 1	complement(join(546374..546540,546576..546722,546763..547165))	Theileria orientalis strain Shintoku	20714432
TOT_020000270	CDS	TOT_020000270	NC_025261.1	547368	547977	R	conserved hypothetical protein	complement(join(547368..547398,547463..547593,547689..547739,547796..547904,547943..547977))	Theileria orientalis strain Shintoku	20714433
TOT_020000271	CDS	TOT_020000271	NC_025261.1	548239	550547	R	ATP-dependent helicase	complement(join(548239..548457,548480..548728,548806..548903,548933..549066,549097..549227,549261..549367,549397..549880,549951..550547))	Theileria orientalis strain Shintoku	20714434
TOT_020000272	CDS	TOT_020000272	NC_025261.1	550704	552164	R	major facilitator superfamily MFS-1 protein	complement(550704..552164)	Theileria orientalis strain Shintoku	20714435
TOT_020000273	CDS	TOT_020000273	NC_025261.1	552887	553521	R	conserved hypothetical protein	complement(join(552887..553095,553127..553299,553331..553521))	Theileria orientalis strain Shintoku	20714436
TOT_020000274	CDS	TOT_020000274	NC_025261.1	553737	555750	D	conserved hypothetical protein	join(553737..553888,553920..554070,554100..554156,554187..554280,554309..554416,554446..554556,554593..555065,555103..555170,555235..555355,555388..555513,555550..555750)	Theileria orientalis strain Shintoku	20714437
TOT_020000275	CDS	TOT_020000275	NC_025261.1	555865	556513	R	mitochondrial ribosome domain containing protein; uncharacterized protein	complement(join(555865..556119,556149..556302,556332..556513))	Theileria orientalis strain Shintoku	20714438
TOT_020000276	CDS	TOT_020000276	NC_025261.1	557105	557616	D	40S ribosomal protein S11	join(557105..557125,557167..557616)	Theileria orientalis strain Shintoku	20714439
TOT_020000277	CDS	TOT_020000277	NC_025261.1	557847	560168	R	conserved hypothetical protein	complement(join(557847..558104,558140..558388,558646..558709,558744..558790,558831..558913,558955..559041,559079..559259,559293..559545,559575..559697,559741..559973,560049..560168))	Theileria orientalis strain Shintoku	20714440
TOT_020000278	CDS	TOT_020000278	NC_025261.1	560320	560601	D	proteasome regulatory protein	560320..560601	Theileria orientalis strain Shintoku	20714441
TOT_020000279	CDS	TOT_020000279	NC_025261.1	561154	561309	R	hypothetical protein	complement(561154..561309)	Theileria orientalis strain Shintoku	20714442
TOT_020000280	CDS	TOT_020000280	NC_025261.1	561361	562791	D	conserved hypothetical protein	561361..562791	Theileria orientalis strain Shintoku	20714443
TOT_020000281	CDS	TOT_020000281	NC_025261.1	562944	563466	D	hypothetical protein	join(562944..563140,563202..563278,563357..563466)	Theileria orientalis strain Shintoku	20714444
TOT_020000282	CDS	TOT_020000282	NC_025261.1	563939	564760	R	Cg8 protein	complement(join(563939..564073,564105..564211,564243..564557,564715..564760))	Theileria orientalis strain Shintoku	20714445
TOT_020000283	CDS	TOT_020000283	NC_025261.1	565035	567365	R	conserved hypothetical protein	complement(join(565035..566213,566336..566804,566835..567052,567084..567365))	Theileria orientalis strain Shintoku	20714446
TOT_020000284	CDS	TOT_020000284	NC_025261.1	567610	568341	D	eukaryotic translation initiation factor 3 subunit 2	567610..568341	Theileria orientalis strain Shintoku	20714447
TOT_020000285	CDS	TOT_020000285	NC_025261.1	568559	571190	R	beta adaptin	complement(join(568559..569987,570186..570685,570700..570847,570886..571190))	Theileria orientalis strain Shintoku	20714448
TOT_020000286	CDS	TOT_020000286	NC_025261.1	571473	571840	R	60S ribosomal protein L30	complement(join(571473..571675,571717..571840))	Theileria orientalis strain Shintoku	20714449
TOT_020000287	CDS	TOT_020000287	NC_025261.1	572164	574311	R	conserved hypothetical protein	complement(572164..574311)	Theileria orientalis strain Shintoku	20714450
TOT_020001043	CDS	TOT_020001043	NC_025261.1	574883	575992	R	eukaryotic translation initiation factor 3	complement(574883..575992)	Theileria orientalis strain Shintoku	20715134
TOT_020000289	CDS	TOT_020000289	NC_025261.1	576243	576975	D	conserved hypothetical protein	join(576243..576299,576337..576406,576474..576583,576651..576805,576843..576975)	Theileria orientalis strain Shintoku	20714451
TOT_020000290	CDS	TOT_020000290	NC_025261.1	577247	581793	R	isoleucyl-tRNA synthetase	complement(join(577247..577459,577668..578327,578525..578633,578827..579042,579262..580221,580427..580843,580875..581144,581182..581560,581601..581793))	Theileria orientalis strain Shintoku	20714452
TOT_020000291	CDS	TOT_020000291	NC_025261.1	581893	583116	D	chaperonin	join(581893..582112,582144..582289,582324..582388,582554..582623,582655..582779,582846..583116)	Theileria orientalis strain Shintoku	20714453
TOT_020000292	CDS	TOT_020000292	NC_025261.1	583238	585168	D	topoisomerase-related nucleotidyltransferase	join(583238..583420,583452..583572,583605..583759,583789..583858,583925..584104,584134..584201,584232..584482,584511..584592,584623..584697,584791..585168)	Theileria orientalis strain Shintoku	20714454
TOT_020000293	CDS	TOT_020000293	NC_025261.1	585417	585941	R	endoplasmic reticulum transport protein	complement(585417..585941)	Theileria orientalis strain Shintoku	20714455
TOT_020000294	CDS	TOT_020000294	NC_025261.1	586002	588107	R	conserved hypothetical protein	complement(586002..588107)	Theileria orientalis strain Shintoku	20714456
TOT_020000295	CDS	TOT_020000295	NC_025261.1	588984	591146	D	conserved hypothetical protein	join(588984..589948,589999..590107,590241..590360,590392..590505,590554..590616,590750..590839,590877..590977,591008..591146)	Theileria orientalis strain Shintoku	20714457
TOT_020000296	CDS	TOT_020000296	NC_025261.1	591187	591887	R	transport protein particle (TRAPP) component, Bet3 family protein; uncharacterized protein	complement(join(591187..591510,591540..591887))	Theileria orientalis strain Shintoku	20714458
TOT_020000297	CDS	TOT_020000297	NC_025261.1	591947	594002	D	helicase	join(591947..592324,592367..592706,592774..594002)	Theileria orientalis strain Shintoku	20714459
TOT_020000298	CDS	TOT_020000298	NC_025261.1	594299	594795	D	60S ribosomal protein L27a	join(594299..594463,594517..594795)	Theileria orientalis strain Shintoku	20714460
TOT_020000299	CDS	TOT_020000299	NC_025261.1	595128	598274	R	predicted protein	complement(595128..598274)	Theileria orientalis strain Shintoku	20714461
TOT_020000300	CDS	TOT_020000300	NC_025261.1	598703	599450	R	thymidylate kinase	complement(join(598703..598818,598851..598959,599005..599095,599133..599244,599282..599364,599395..599450))	Theileria orientalis strain Shintoku	20714462
TOT_020000301	CDS	TOT_020000301	NC_025261.1	599727	601621	D	cyclin-dependent protein kinase PHO85 homologue	join(599727..600640,600805..600971,601086..601219,601232..601621)	Theileria orientalis strain Shintoku	20714463
TOT_020000302	CDS	TOT_020000302	NC_025261.1	601773	603493	D	conserved hypothetical protein	join(601773..602012,602054..602463,602839..603493)	Theileria orientalis strain Shintoku	20714464
TOT_020000303	CDS	TOT_020000303	NC_025261.1	603798	610705	R	glutaminyl-tRNA synthetase	complement(join(603798..604018,604108..604332,604364..604578,604805..605190,605347..605475,609297..609426,609483..609665,609840..610705))	Theileria orientalis strain Shintoku	20714465
TOT_020000304	CDS	TOT_020000304	NC_025261.1	611339	611821	D	ribosomal protein L23	join(611339..611348,611382..611497,611528..611821)	Theileria orientalis strain Shintoku	20714466
TOT_020000305	CDS	TOT_020000305	NC_025261.1	611974	613073	R	syntaxin 5	complement(join(611974..612027,612061..612122,612230..612420,612526..613073))	Theileria orientalis strain Shintoku	20714467
TOT_020000306	CDS	TOT_020000306	NC_025261.1	613186	614979	D	predicted protein	join(613186..613251,613283..613381,613413..613556,613835..613981,614049..614129,614160..614272,614350..614404,614451..614563,614678..614739,614830..614884,614916..614979)	Theileria orientalis strain Shintoku	20714468
TOT_020000307	CDS	TOT_020000307	NC_025261.1	615099	620911	D	coagulation factor 5/8 type, C-terminal domain containing protein; uncharacterized protein	join(615099..615315,615345..615418,615448..615526,615558..615820,615936..616023,616097..616399,616434..617226,617263..618666,618764..619604,619638..619737,619827..620186,620271..620641,620789..620911)	Theileria orientalis strain Shintoku	20714469
TOT_020000308	CDS	TOT_020000308	NC_025261.1	621277	621942	R	conserved hypothetical protein	complement(621277..621942)	Theileria orientalis strain Shintoku	20714470
TOT_020000309	CDS	TOT_020000309	NC_025261.1	622306	624080	R	conserved hypothetical protein	complement(join(622306..623861,624059..624080))	Theileria orientalis strain Shintoku	20714471
TOT_020000310	CDS	TOT_020000310	NC_025261.1	624693	625262	R	conserved hypothetical protein	complement(624693..625262)	Theileria orientalis strain Shintoku	20714472
TOT_020000311	CDS	TOT_020000311	NC_025261.1	625881	627236	R	Bromodomain-containing protein 1	complement(join(625881..626493,626698..627236))	Theileria orientalis strain Shintoku	20714473
TOT_020000312	CDS	TOT_020000312	NC_025261.1	627342	629999	R	mRNA capping enzyme, large subunit family protein; uncharacterized protein	complement(join(627342..627817,627977..628597,628643..628817,628992..629233,629309..629999))	Theileria orientalis strain Shintoku	20714474
TOT_020000313	CDS	TOT_020000313	NC_025261.1	630336	630974	D	cargo protein	630336..630974	Theileria orientalis strain Shintoku	20714475
TOT_020000314	CDS	TOT_020000314	NC_025261.1	631237	635482	R	ubiquitin-activating enzyme, E1 family protein; uncharacterized protein	complement(join(631237..631316,631377..633097,633192..633252,633299..633787,633824..633985,634162..635482))	Theileria orientalis strain Shintoku	20714476
TOT_020000315	CDS	TOT_020000315	NC_025261.1	635710	637600	R	ATP-dependent RNA helicase	complement(join(635710..635935,636084..637329,637411..637600))	Theileria orientalis strain Shintoku	20714477
TOT_020000316	CDS	TOT_020000316	NC_025261.1	637763	638716	D	predicted protein	join(637763..637772,637804..637986,638051..638443,638553..638716)	Theileria orientalis strain Shintoku	20714478
TOT_020000317	CDS	TOT_020000317	NC_025261.1	638812	640618	D	apurinic/apyrimidinic endonuclease	join(638812..638928,639000..639189,639261..639395,639471..639526,639558..639663,639723..639815,639897..639946,640004..640141,640250..640289,640320..640618)	Theileria orientalis strain Shintoku	20714479
TOT_020000318	CDS	TOT_020000318	NC_025261.1	641268	642865	D	conserved hypothetical protein	join(641268..641623,641717..641802,641863..642045,642110..642309,642396..642566,642602..642865)	Theileria orientalis strain Shintoku	20714480
TOT_020000319	CDS	TOT_020000319	NC_025261.1	643125	644870	R	conserved hypothetical protein	complement(join(643125..644711,644814..644870))	Theileria orientalis strain Shintoku	20714481
TOT_020000320	CDS	TOT_020000320	NC_025261.1	645118	647673	R	conserved hypothetical protein	complement(join(645118..645890,646134..646559,646782..647673))	Theileria orientalis strain Shintoku	20714482
TOT_020000321	CDS	TOT_020000321	NC_025261.1	648103	649630	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(648103..649429,649626..649630))	Theileria orientalis strain Shintoku	20714483
TOT_020000322	CDS	TOT_020000322	NC_025261.1	651145	651360	R	hypothetical protein	complement(651145..651360)	Theileria orientalis strain Shintoku	20714484
TOT_020000323	CDS	TOT_020000323	NC_025261.1	651585	655286	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(651585..653650,653681..655286)	Theileria orientalis strain Shintoku	20714485
TOT_020001044	CDS	TOT_020001044	NC_025261.1	655837	656421	R	nucleotide-sensitive chloride conductance regulator family protein; uncharacterized protein	complement(join(655837..655869,655902..656074,656105..656224,656286..656421))	Theileria orientalis strain Shintoku	20715135
TOT_020000325	CDS	TOT_020000325	NC_025261.1	656552	657614	D	conserved hypothetical protein	join(656552..656886,656917..656963,657083..657225,657285..657474,657517..657614)	Theileria orientalis strain Shintoku	20714486
TOT_020001045	CDS	TOT_020001045	NC_025261.1	657839	661030	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(657839..658221,658312..659199,659311..659701,659756..660466,660594..660749,660881..661030))	Theileria orientalis strain Shintoku	20715136
TOT_020001046	CDS	TOT_020001046	NC_025261.1	661414	661924	D	autophagy protein 8I	join(661414..661453,661521..661626,661690..661924)	Theileria orientalis strain Shintoku	20715137
TOT_020001047	CDS	TOT_020001047	NC_025261.1	662413	664929	D	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase family protein; uncharacterized protein	join(662413..663139,663273..663389,663489..663618,663721..663994,664192..664714,664823..664929)	Theileria orientalis strain Shintoku	20715138
TOT_020001003	CDS	TOT_020001003	NC_025261.1	665195	666770	D	conserved hypothetical protein	join(665195..665204,665338..666770)	Theileria orientalis strain Shintoku	20715097
TOT_020000327	CDS	TOT_020000327	NC_025261.1	667162	669021	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	667162..669021	Theileria orientalis strain Shintoku	20714487
TOT_020000328	CDS	TOT_020000328	NC_025261.1	670564	675117	D	ABC transporter related domain containing protein; uncharacterized protein	join(670564..671040,671107..675117)	Theileria orientalis strain Shintoku	20714488
TOT_020000329	CDS	TOT_020000329	NC_025261.1	675899	676648	R	conserved hypothetical protein	complement(join(675899..675923,675987..676648))	Theileria orientalis strain Shintoku	20714489
TOT_020001048	CDS	TOT_020001048	NC_025261.1	676796	678496	D	molecular chaperone, heat shock protein, Hsp40, DnaJ family protein; uncharacterized protein	join(676796..676859,676893..676925,677075..677229,677365..677491,677536..677777,677888..678115,678218..678307,678413..678496)	Theileria orientalis strain Shintoku	20715139
TOT_020000331	CDS	TOT_020000331	NC_025261.1	678601	679115	R	adhesion regulation modulator protein	complement(join(678601..678645,678714..678854,678889..678945,679014..679115))	Theileria orientalis strain Shintoku	20714490
TOT_020000332	CDS	TOT_020000332	NC_025261.1	679197	682157	R	peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 domain containing protein; uncharacterized protein	complement(join(679197..679516,679694..682157))	Theileria orientalis strain Shintoku	20714491
TOT_020000333	CDS	TOT_020000333	NC_025261.1	682320	682771	D	conserved hypothetical protein	join(682320..682498,682529..682582,682614..682678,682713..682771)	Theileria orientalis strain Shintoku	20714492
TOT_020001049	CDS	TOT_020001049	NC_025261.1	682926	683652	R	RNA polymerase Rpb7, N-terminal domain containing protein; uncharacterized protein	complement(join(682926..683043,683122..683150,683353..683505,683542..683652))	Theileria orientalis strain Shintoku	20715140
TOT_020001050	CDS	TOT_020001050	NC_025261.1	683801	685175	R	P60-like family protein; uncharacterized protein	complement(join(683801..684670,684765..684937,685049..685175))	Theileria orientalis strain Shintoku	20715141
TOT_020001051	CDS	TOT_020001051	NC_025261.1	685268	687432	R	ribosomal protein S9/S16	complement(join(685268..685701,685789..686527,686615..687254,687299..687432))	Theileria orientalis strain Shintoku	20715142
TOT_020000337	CDS	TOT_020000337	NC_025261.1	688090	689177	D	conserved hypothetical protein	join(688090..688788,688876..689021,689039..689177)	Theileria orientalis strain Shintoku	20714493
TOT_020000338	CDS	TOT_020000338	NC_025261.1	689537	691192	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(689537..690416,690505..690906,690992..691049,691132..691192)	Theileria orientalis strain Shintoku	20714494
TOT_020000339	CDS	TOT_020000339	NC_025261.1	692129	693884	D	serine/threonine protein phosphatase 1, PP1-gamma catalytic subunit	join(692129..692534,692640..693103,693525..693884)	Theileria orientalis strain Shintoku	20714495
TOT_020000340	CDS	TOT_020000340	NC_025261.1	693516	697532	R	beta-lactamase family protein; uncharacterized protein	complement(join(693516..693620,693743..693915,694037..695982,696046..697532))	Theileria orientalis strain Shintoku	20714496
TOT_020001004	CDS	TOT_020001004	NC_025261.1	697830	699591	D	mRNA capping enzyme	join(697830..697978,698091..698295,698327..698557,698691..698846,698882..698956,699082..699155,699234..699591)	Theileria orientalis strain Shintoku	20715098
TOT_020001005	CDS	TOT_020001005	NC_025261.1	700120	701743	D	thioredoxin domain containing protein; uncharacterized protein	join(700120..700497,700662..700847,700882..701181,701390..701743)	Theileria orientalis strain Shintoku	20715099
TOT_020000342	CDS	TOT_020000342	NC_025261.1	702430	705282	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	702430..705282	Theileria orientalis strain Shintoku	20714497
TOT_020000343	CDS	TOT_020000343	NC_025261.1	705919	707367	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	705919..707367	Theileria orientalis strain Shintoku	20714498
TOT_020000344	CDS	TOT_020000344	NC_025261.1	708007	709788	D	hydrolase	join(708007..708063,708125..708272,708332..708559,708623..708724,708781..708882,708898..709154,709313..709487,709521..709712,709745..709788)	Theileria orientalis strain Shintoku	20714499
TOT_020000345	CDS	TOT_020000345	NC_025261.1	710078	711975	R	eukaryotic peptide chain release factor	complement(join(710078..710362,710557..710635,710671..710736,710847..710887,710987..711088,711118..711243,711276..711353,711474..711530,711587..711661,711695..711773,711842..711975))	Theileria orientalis strain Shintoku	20714500
TOT_020000346	CDS	TOT_020000346	NC_025261.1	712175	712651	D	molecular chaperone protein	join(712175..712401,712452..712525,712596..712651)	Theileria orientalis strain Shintoku	20714501
TOT_020000347	CDS	TOT_020000347	NC_025261.1	712724	713413	R	conserved hypothetical protein	complement(join(712724..712915,712967..713092,713123..713308,713351..713413))	Theileria orientalis strain Shintoku	20714502
TOT_020001052	CDS	TOT_020001052	NC_025261.1	713523	715627	D	PCI/PINT associated module domain containing protein; uncharacterized protein	join(713523..713732,713776..713939,713970..714072,714157..714295,714328..714371,714442..714491,714542..714635,714701..714762,714792..714869,714905..714974,715124..715215,715252..715360,715499..715627)	Theileria orientalis strain Shintoku	20715143
TOT_020000349	CDS	TOT_020000349	NC_025261.1	715775	716295	R	RNA polymerase subunit RPB4-like protein	complement(join(715775..715946,716045..716122,716153..716295))	Theileria orientalis strain Shintoku	20714503
TOT_020000350	CDS	TOT_020000350	NC_025261.1	716589	720305	D	conserved hypothetical protein	join(716589..717405,717518..717676,717745..719406,719440..719487,719719..720305)	Theileria orientalis strain Shintoku	20714504
TOT_020000351	CDS	TOT_020000351	NC_025261.1	720721	724607	D	peptidase S16, ATP-dependent protease La family protein; uncharacterized protein	join(720721..722539,722800..724607)	Theileria orientalis strain Shintoku	20714505
TOT_020000352	CDS	TOT_020000352	NC_025261.1	724784	725127	D	hypothetical protein	join(724784..724855,725056..725127)	Theileria orientalis strain Shintoku	20714506
TOT_020000353	CDS	TOT_020000353	NC_025261.1	725916	726485	D	conserved hypothetical protein	725916..726485	Theileria orientalis strain Shintoku	20714507
TOT_020000354	CDS	TOT_020000354	NC_025261.1	726802	727333	R	small nuclear ribonucleoprotein associated protein b	complement(join(726802..727089,727160..727333))	Theileria orientalis strain Shintoku	20714508
TOT_020000355	CDS	TOT_020000355	NC_025261.1	727740	730460	R	conserved hypothetical protein	complement(join(727740..727822,727858..728343,728374..730242,730274..730460))	Theileria orientalis strain Shintoku	20714509
TOT_020000356	CDS	TOT_020000356	NC_025261.1	730995	732545	D	Diphthamide synthesis protein	join(730995..731255,731305..731844,731927..732172,732253..732415,732448..732545)	Theileria orientalis strain Shintoku	20714510
TOT_020000357	CDS	TOT_020000357	NC_025261.1	732717	733229	R	protein of unknown function DUF339 family protein; uncharacterized protein	complement(732717..733229)	Theileria orientalis strain Shintoku	20714511
TOT_020000358	CDS	TOT_020000358	NC_025261.1	733340	734339	R	YT521-B-like protein family protein; uncharacterized protein	complement(join(733340..733590,733651..734250,734282..734339))	Theileria orientalis strain Shintoku	20714512
TOT_020000359	CDS	TOT_020000359	NC_025261.1	734557	735444	D	splicing factor	join(734557..734583,734725..735040,735072..735268,735325..735444)	Theileria orientalis strain Shintoku	20714513
TOT_020001053	CDS	TOT_020001053	NC_025261.1	736327	737124	R	conserved hypothetical protein	complement(join(736327..736815,736900..737124))	Theileria orientalis strain Shintoku	20715144
TOT_020001054	CDS	TOT_020001054	NC_025261.1	737298	738130	R	50S ribosomal protein L9	complement(join(737298..737767,737866..738130))	Theileria orientalis strain Shintoku	20715145
TOT_020001055	CDS	TOT_020001055	NC_025261.1	738345	739850	R	Mg protoporphyrin IX chelatase	complement(join(738345..738813,738903..739112,739236..739369,739404..739850))	Theileria orientalis strain Shintoku	20715146
TOT_020000363	CDS	TOT_020000363	NC_025261.1	740160	741359	D	dual-specificity phosphatase	join(740160..740575,740608..740658,740726..741359)	Theileria orientalis strain Shintoku	20714514
TOT_020000364	CDS	TOT_020000364	NC_025261.1	742102	743119	R	DNA/panTOT_henate metabolism flavoprotein, C-terminal domain containing protein; uncharacterized protein	complement(join(742102..742170,742223..742316,742493..742554,742586..742644,742677..742819,742857..742977,743050..743119))	Theileria orientalis strain Shintoku	20714515
TOT_020000365	CDS	TOT_020000365	NC_025261.1	743267	743662	R	60S acidic ribosomal protein P2	complement(join(743267..743343,743376..743466,743498..743662))	Theileria orientalis strain Shintoku	20714516
TOT_020000366	CDS	TOT_020000366	NC_025261.1	744361	744762	D	proteasome maturation factor UMP1 family protein; uncharacterized protein	744361..744762	Theileria orientalis strain Shintoku	20714517
TOT_020000367	CDS	TOT_020000367	NC_025261.1	744857	745408	R	cleavage and polyadenylation specificity factor subunit 4	complement(join(744857..744979,745010..745408))	Theileria orientalis strain Shintoku	20714518
TOT_020000368	CDS	TOT_020000368	NC_025261.1	745567	746719	D	uracil-DNA glycosylase	join(745567..745766,745798..745929,745960..746023,746054..746233,746265..746340,746512..746610,746640..746719)	Theileria orientalis strain Shintoku	20714519
TOT_020000369	CDS	TOT_020000369	NC_025261.1	746957	748332	R	splicing factor 3b subunit 4	complement(join(746957..747223,747313..747467,747550..747703,747765..747863,747906..748033,748067..748177,748266..748332))	Theileria orientalis strain Shintoku	20714520
TOT_020000370	CDS	TOT_020000370	NC_025261.1	748750	750068	R	conserved hypothetical protein	complement(join(748750..748945,749182..750068))	Theileria orientalis strain Shintoku	20714521
TOT_020000371	CDS	TOT_020000371	NC_025261.1	751097	753388	R	eukaryotic translation initiation factor 3, subunit 6	complement(join(751097..751392,751425..751504,751568..751677,751973..752086,752280..752796,752886..753388))	Theileria orientalis strain Shintoku	20714522
TOT_020000372	CDS	TOT_020000372	NC_025261.1	754084	754735	D	U1/2 small nuclear ribonucleoprotein	join(754084..754274,754306..754735)	Theileria orientalis strain Shintoku	20714523
TOT_020000373	CDS	TOT_020000373	NC_025261.1	755091	756467	D	CAMP-dependent protein kinase catalytic subunit	join(755091..755097,755108..755284,755400..756042,756182..756341,756372..756467)	Theileria orientalis strain Shintoku	20714524
TOT_020000374	CDS	TOT_020000374	NC_025261.1	756938	760651	D	serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase domain containing protein; uncharacterized protein	join(756938..758446,758630..759648,759694..760191,760393..760651)	Theileria orientalis strain Shintoku	20714525
TOT_020000375	CDS	TOT_020000375	NC_025261.1	760796	761809	R	tRNA pseudouridine synthase B, N-terminal domain containing protein; uncharacterized protein	complement(join(760796..760894,760921..761028,761060..761172,761208..761316,761348..761409,761441..761497,761532..761581,761613..761809))	Theileria orientalis strain Shintoku	20714526
TOT_020000376	CDS	TOT_020000376	NC_025261.1	761922	762525	R	conserved hypothetical protein	complement(join(761922..762111,762166..762250,762320..762377,762412..762525))	Theileria orientalis strain Shintoku	20714527
TOT_020001056	CDS	TOT_020001056	NC_025261.1	763327	764313	D	Like-Sm ribonucleoprotein-related, core domain containing protein; uncharacterized protein	join(763327..763393,763436..763570,763604..764313)	Theileria orientalis strain Shintoku	20715147
TOT_020000378	CDS	TOT_020000378	NC_025261.1	764589	768863	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(764589..768776,768807..768863)	Theileria orientalis strain Shintoku	20714528
TOT_020000379	CDS	TOT_020000379	NC_025261.1	768894	769190	R	hypothetical protein	complement(join(768894..768905,768951..769190))	Theileria orientalis strain Shintoku	20714529
TOT_020000380	CDS	TOT_020000380	NC_025261.1	769291	772635	R	dimeric alpha-beta barrel domain containing protein; uncharacterized protein	complement(join(769291..770921,771015..771281,771316..771744,771774..772635))	Theileria orientalis strain Shintoku	20714530
TOT_020000381	CDS	TOT_020000381	NC_025261.1	772955	776304	D	conserved hypothetical protein	join(772955..772979,773011..773807,773813..774127,774162..774700,774782..775174,775366..775489,775524..775777,775807..775942,775984..776304)	Theileria orientalis strain Shintoku	20714531
TOT_020000382	CDS	TOT_020000382	NC_025261.1	777237	781889	D	ABC transporter	777237..781889	Theileria orientalis strain Shintoku	20714532
TOT_020000383	CDS	TOT_020000383	NC_025261.1	781948	783846	R	splicing factor 3 subunit 1	complement(join(781948..782081,782216..782277,782308..782462,782600..782797,782827..782934,782975..783404,783422..783584,783621..783846))	Theileria orientalis strain Shintoku	20714533
TOT_020000384	CDS	TOT_020000384	NC_025261.1	784552	789159	D	ABC transporter	784552..789159	Theileria orientalis strain Shintoku	20714534
TOT_020000385	CDS	TOT_020000385	NC_025261.1	789855	794516	D	ABC transporter related domain containing protein; uncharacterized protein	789855..794516	Theileria orientalis strain Shintoku	20714535
TOT_020000386	CDS	TOT_020000386	NC_025261.1	794644	795204	R	ribosomal protein L20	complement(join(794644..794862,794895..795074,795178..795204))	Theileria orientalis strain Shintoku	20714536
TOT_020000387	CDS	TOT_020000387	NC_025261.1	795456	797018	D	translocation protein	join(795456..795503,795574..795657,795687..795794,795828..795864,795876..796036,796085..796147,796176..796371,796403..796510,796545..796643,796785..796888,796920..797018)	Theileria orientalis strain Shintoku	20714537
TOT_020000388	CDS	TOT_020000388	NC_025261.1	797145	798136	D	ubiquitin domain containing protein; uncharacterized protein	join(797145..797487,797529..797673,797989..798136)	Theileria orientalis strain Shintoku	20714538
TOT_020000389	CDS	TOT_020000389	NC_025261.1	798184	799332	R	Longevity-assurance protein (LAG1) domain containing protein; uncharacterized protein	complement(join(798184..798288,798321..798593,798624..798861,798893..799012,799097..799332))	Theileria orientalis strain Shintoku	20714539
TOT_020000390	CDS	TOT_020000390	NC_025261.1	799832	800254	R	cytochrome c	complement(join(799832..799980,800022..800117,800152..800254))	Theileria orientalis strain Shintoku	20714540
TOT_020000391	CDS	TOT_020000391	NC_025261.1	801002	802652	D	conserved hypothetical protein	join(801002..801060,801078..801550,801579..801813,801844..802026,802125..802281,802311..802433,802476..802652)	Theileria orientalis strain Shintoku	20714541
TOT_020000392	CDS	TOT_020000392	NC_025261.1	803031	804122	D	uncharacterized protein	803031..804122	Theileria orientalis strain Shintoku	20714542
TOT_020000393	CDS	TOT_020000393	NC_025261.1	804519	807580	R	calcium-dependent protein kinase	complement(join(804519..804605,804636..804717,804887..804998,805099..806015,806283..807580))	Theileria orientalis strain Shintoku	20714543
TOT_020000394	CDS	TOT_020000394	NC_025261.1	808679	809113	D	conserved hypothetical protein	808679..809113	Theileria orientalis strain Shintoku	20714544
TOT_020000395	CDS	TOT_020000395	NC_025261.1	810010	812928	D	oxysterol-binding protein family protein; uncharacterized protein	join(810010..811200,811329..811628,811723..811827,811864..812057,812079..812678,812717..812819,812863..812928)	Theileria orientalis strain Shintoku	20714545
TOT_020000396	CDS	TOT_020000396	NC_025261.1	812961	814631	D	conserved hypothetical protein	join(812961..813743,813909..814277,814369..814520,814553..814631)	Theileria orientalis strain Shintoku	20714546
TOT_020000397	CDS	TOT_020000397	NC_025261.1	814742	815044	D	hypothetical protein	814742..815044	Theileria orientalis strain Shintoku	20714547
TOT_020000398	CDS	TOT_020000398	NC_025261.1	815274	817373	R	Myb, DNA-binding domain containing protein; uncharacterized protein	complement(join(815274..816503,816558..817373))	Theileria orientalis strain Shintoku	20714548
TOT_020000399	CDS	TOT_020000399	NC_025261.1	817799	819765	R	peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein; uncharacterized protein	complement(join(817799..817989,818023..818278,818396..818613,818661..818777,818810..818998,819039..819147,819178..819342,819402..819569,819604..819765))	Theileria orientalis strain Shintoku	20714549
TOT_020000400	CDS	TOT_020000400	NC_025261.1	820387	825394	D	IQ calmodulin-binding region domain containing protein; uncharacterized protein	join(820387..820649,820731..821084,821116..821356,821389..821475,821614..821879,821920..822206,822236..822316,822347..822477,822518..822583,822614..822691,822733..823517,823587..824172,824273..825394)	Theileria orientalis strain Shintoku	20714550
TOT_020000401	CDS	TOT_020000401	NC_025261.1	825491	826618	D	protein similar to CwfJ, C-terminal 1 domain containing protein; uncharacterized protein	825491..826618	Theileria orientalis strain Shintoku	20714551
TOT_020000402	CDS	TOT_020000402	NC_025261.1	826779	827652	R	possible metal-binding region in RNase L inhibitor, RLI domain containing protein; uncharacterized protein	complement(join(826779..827002,827036..827143,827238..827652))	Theileria orientalis strain Shintoku	20714552
TOT_020000403	CDS	TOT_020000403	NC_025261.1	827926	829983	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(827926..829983)	Theileria orientalis strain Shintoku	20714553
TOT_020000404	CDS	TOT_020000404	NC_025261.1	830404	832947	D	conserved hypothetical protein	join(830404..831972,832004..832411,832537..832770,832801..832947)	Theileria orientalis strain Shintoku	20714554
TOT_020000405	CDS	TOT_020000405	NC_025261.1	833095	835498	R	carbonic anhydrase, eukaryotic family protein; uncharacterized protein	complement(join(833095..834184,834266..834633,834670..834878,834911..835192,835387..835498))	Theileria orientalis strain Shintoku	20714555
TOT_020001057	CDS	TOT_020001057	NC_025261.1	835662	837653	R	protein of unknown function DUF1716, eukaryotic domain containing protein; uncharacterized protein	complement(join(835662..835768,835799..836131,836162..836218,836251..836336,836414..836566,836598..836647,836710..837029,837060..837114,837147..837241,837271..837410,837441..837541,837633..837653))	Theileria orientalis strain Shintoku	20715148
TOT_020000407	CDS	TOT_020000407	NC_025261.1	838027	841280	D	molecular chaperone, heat shock protein, Hsp40, DnaJ family protein; uncharacterized protein	join(838027..840548,840742..841116,841256..841280)	Theileria orientalis strain Shintoku	20714556
TOT_020001006	CDS	TOT_020001006	NC_025261.1	841325	841930	D	conserved hypothetical protein	join(841325..841596,841639..841930)	Theileria orientalis strain Shintoku	20715100
TOT_020000408	CDS	TOT_020000408	NC_025261.1	841965	842433	R	clathrin-coat assembly protein	complement(join(841965..842337,842378..842433))	Theileria orientalis strain Shintoku	20714557
TOT_020000409	CDS	TOT_020000409	NC_025261.1	842923	843557	D	conserved hypothetical protein	join(842923..843213,843246..843557)	Theileria orientalis strain Shintoku	20714558
TOT_020000410	CDS	TOT_020000410	NC_025261.1	843925	846072	D	cyclin-like domain containing protein; uncharacterized protein	843925..846072	Theileria orientalis strain Shintoku	20714559
TOT_020000411	CDS	TOT_020000411	NC_025261.1	846193	851661	R	conserved hypothetical protein	complement(join(846193..847075,847211..849214,849419..851661))	Theileria orientalis strain Shintoku	20714560
TOT_020000412	CDS	TOT_020000412	NC_025261.1	851951	853489	R	protein of unknown function DUF501 family protein; uncharacterized protein	complement(851951..853489)	Theileria orientalis strain Shintoku	20714561
TOT_020000413	CDS	TOT_020000413	NC_025261.1	853821	854273	D	nucleoside diphosphate kinase	853821..854273	Theileria orientalis strain Shintoku	20714562
TOT_020000414	CDS	TOT_020000414	NC_025261.1	854439	856214	R	signal recognition particle receptor subunit alpha	complement(join(854439..855881,855913..856008,856077..856214))	Theileria orientalis strain Shintoku	20714563
TOT_020000415	CDS	TOT_020000415	NC_025261.1	857326	858765	D	conserved hypothetical protein	857326..858765	Theileria orientalis strain Shintoku	20714564
TOT_020000416	CDS	TOT_020000416	NC_025261.1	858927	859319	R	conserved hypothetical protein	complement(858927..859319)	Theileria orientalis strain Shintoku	20714565
TOT_020000417	CDS	TOT_020000417	NC_025261.1	859742	860448	D	conserved hypothetical protein	join(859742..859886,859919..860448)	Theileria orientalis strain Shintoku	20714566
TOT_020000418	CDS	TOT_020000418	NC_025261.1	860450	861249	R	translation initiation factor SUI1 domain containing protein; uncharacterized protein	complement(join(860450..860545,860668..860771,860910..861249))	Theileria orientalis strain Shintoku	20714567
TOT_020000419	CDS	TOT_020000419	NC_025261.1	861609	864121	R	mitochondrial respiratory chain complexes assembly protein	complement(join(861609..863063,863219..863431,863468..864121))	Theileria orientalis strain Shintoku	20714568
TOT_020000420	CDS	TOT_020000420	NC_025261.1	864613	867123	D	ATP-dependent RNA helicase	join(864613..864837,864889..865847,865887..866121,866185..866292,866351..866443,866483..866552,866641..866824,866856..866988,867049..867123)	Theileria orientalis strain Shintoku	20714569
TOT_020000421	CDS	TOT_020000421	NC_025261.1	867656	868812	D	conserved hypothetical protein	join(867656..868276,868363..868812)	Theileria orientalis strain Shintoku	20714570
TOT_020000422	CDS	TOT_020000422	NC_025261.1	869213	870298	D	Os02g0506500 protein; uncharacterized protein	join(869213..869467,869519..869601,869629..870298)	Theileria orientalis strain Shintoku	20714571
TOT_020000423	CDS	TOT_020000423	NC_025261.1	870539	871652	D	HSP20-like chaperone domain containing protein; uncharacterized protein	join(870539..870687,870728..870801,870944..871046,871153..871235,871330..871652)	Theileria orientalis strain Shintoku	20714572
TOT_020000424	CDS	TOT_020000424	NC_025261.1	871794	874110	R	histidyl-tRNA synthetase family protein; uncharacterized protein	complement(join(871794..872015,872048..872342,872482..872575,872726..872834,872884..872947,872979..873265,873343..873404,873436..873793,873834..873980,873991..874110))	Theileria orientalis strain Shintoku	20714573
TOT_020000425	CDS	TOT_020000425	NC_025261.1	874141	876660	R	predicted protein	complement(874141..876660)	Theileria orientalis strain Shintoku	20714574
TOT_020000426	CDS	TOT_020000426	NC_025261.1	877657	878421	R	purine nucleoside phosphorylase	complement(877657..878421)	Theileria orientalis strain Shintoku	20714575
TOT_020000427	CDS	TOT_020000427	NC_025261.1	878658	879422	D	purine nucleoside phosphorylase	878658..879422	Theileria orientalis strain Shintoku	20714576
TOT_020000428	CDS	TOT_020000428	NC_025261.1	879487	882308	R	Brix domain containing protein; uncharacterized protein	complement(join(879487..879502,879766..879982,880056..880126,880168..880523,880612..881137,881531..882023,882053..882308))	Theileria orientalis strain Shintoku	20714577
TOT_020000429	CDS	TOT_020000429	NC_025261.1	882690	884467	D	nucleic acid binding, OB-fold, tRNA/helicase-type domain containing protein; uncharacterized protein	join(882690..882830,882860..882931,882964..883103,883134..883236,883269..883364,883412..883594,883633..883916,883949..884016,884132..884223,884255..884467)	Theileria orientalis strain Shintoku	20714578
TOT_020000430	CDS	TOT_020000430	NC_025261.1	884672	885642	D	protein of unknown function DUF71, ATP-binding region domain containing protein; uncharacterized protein	join(884672..884891,884947..885035,885069..885145,885177..885295,885330..885391,885426..885517,885549..885642)	Theileria orientalis strain Shintoku	20714579
TOT_020000431	CDS	TOT_020000431	NC_025261.1	886358	886825	D	vacuolar ATP synthase subunit F	join(886358..886411,886478..886559,886596..886825)	Theileria orientalis strain Shintoku	20714580
TOT_020000432	CDS	TOT_020000432	NC_025261.1	886889	888247	R	zinc finger, DHHC-type domain containing protein; uncharacterized protein	complement(join(886889..887049,887196..887442,887474..888247))	Theileria orientalis strain Shintoku	20714581
TOT_020000433	CDS	TOT_020000433	NC_025261.1	888492	890066	R	conserved hypothetical protein	complement(join(888492..888590,888621..888767,888808..889140,889181..889409,889442..889523,889558..889858,889891..889953,890001..890066))	Theileria orientalis strain Shintoku	20714582
TOT_020000434	CDS	TOT_020000434	NC_025261.1	890518	891533	R	conserved hypothetical protein	complement(join(890518..890766,890798..890907,891055..891223,891255..891533))	Theileria orientalis strain Shintoku	20714583
TOT_020000435	CDS	TOT_020000435	NC_025261.1	892348	894106	D	transducin beta-like protein 1	join(892348..892696,892818..894106)	Theileria orientalis strain Shintoku	20714584
TOT_020000436	CDS	TOT_020000436	NC_025261.1	894546	897026	D	DNA replication factor CDT1 like family protein; uncharacterized protein	join(894546..896640,896854..897026)	Theileria orientalis strain Shintoku	20714585
TOT_020000437	CDS	TOT_020000437	NC_025261.1	897028	897575	R	transcription factor IIA, helical domain containing protein; uncharacterized protein	complement(join(897028..897234,897264..897575))	Theileria orientalis strain Shintoku	20714586
TOT_020000438	CDS	TOT_020000438	NC_025261.1	897922	900279	D	conserved hypothetical protein	897922..900279	Theileria orientalis strain Shintoku	20714587
TOT_020000439	CDS	TOT_020000439	NC_025261.1	900588	902522	D	transducin beta-like protein 1	join(900588..900652,900772..901112,901234..901447,901490..902522)	Theileria orientalis strain Shintoku	20714588
TOT_020000440	CDS	TOT_020000440	NC_025261.1	902962	905539	D	DNA replication factor CDT1 like family protein; uncharacterized protein	join(902962..905146,905367..905539)	Theileria orientalis strain Shintoku	20714589
TOT_020000441	CDS	TOT_020000441	NC_025261.1	906099	907076	D	oxoglutarate/malate translocator protein	906099..907076	Theileria orientalis strain Shintoku	20714590
TOT_020000442	CDS	TOT_020000442	NC_025261.1	907273	908542	R	GTP-binding protein Obg/CgtA family protein; uncharacterized protein	complement(join(907273..908005,908145..908542))	Theileria orientalis strain Shintoku	20714591
TOT_020000443	CDS	TOT_020000443	NC_025261.1	908741	910983	D	conserved hypothetical protein	join(908741..909237,909301..909380,909627..909793,909955..910085,910249..910371,910401..910596,910693..910983)	Theileria orientalis strain Shintoku	20714592
TOT_020000444	CDS	TOT_020000444	NC_025261.1	911833	913868	D	conserved hypothetical protein	join(911833..912201,912266..912356,912405..912671,912807..913103,913215..913536,913634..913868)	Theileria orientalis strain Shintoku	20714593
TOT_020001058	CDS	TOT_020001058	NC_025261.1	919095	920865	D	protein of unknown function DUF254, SAND family protein; uncharacterized protein	join(919095..919147,919231..919265,919298..919494,919525..919774,920012..920093,920244..920625,920698..920865)	Theileria orientalis strain Shintoku	20715149
TOT_020000446	CDS	TOT_020000446	NC_025261.1	921243	923862	R	ABC transporter	complement(join(921243..921455,921670..921879,922022..922124,922217..923862))	Theileria orientalis strain Shintoku	20714594
TOT_020000447	CDS	TOT_020000447	NC_025261.1	924267	924591	D	hypothetical protein	join(924267..924353,924397..924591)	Theileria orientalis strain Shintoku	20714595
TOT_020000448	CDS	TOT_020000448	NC_025261.1	924684	926870	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(924684..924816,924847..924904,924937..925300,925446..925756,926074..926145,926248..926421,926575..926723,926770..926870))	Theileria orientalis strain Shintoku	20714596
TOT_020001059	CDS	TOT_020001059	NC_025261.1	928424	930717	D	protein kinase, core domain containing protein; uncharacterized protein	join(928424..928828,928919..929528,929750..930717)	Theileria orientalis strain Shintoku	20715150
TOT_020000450	CDS	TOT_020000450	NC_025261.1	931022	932443	D	cell differentiation protein	join(931022..931341,931373..931625,931656..931751,931994..932232,932338..932443)	Theileria orientalis strain Shintoku	20714597
TOT_020000451	CDS	TOT_020000451	NC_025261.1	932459	932837	R	hypothetical protein	complement(join(932459..932703,932723..932837))	Theileria orientalis strain Shintoku	20714598
TOT_020000452	CDS	TOT_020000452	NC_025261.1	932959	933346	D	hypothetical protein	join(932959..932993,933035..933083,933284..933346)	Theileria orientalis strain Shintoku	20714599
TOT_020000453	CDS	TOT_020000453	NC_025261.1	933470	934866	R	tubulin subunit beta	complement(join(933470..934693,934771..934866))	Theileria orientalis strain Shintoku	20714600
TOT_020000454	CDS	TOT_020000454	NC_025261.1	935447	936409	R	forkhead-associated domain containing protein; uncharacterized protein	complement(935447..936409)	Theileria orientalis strain Shintoku	20714601
TOT_020000455	CDS	TOT_020000455	NC_025261.1	936471	942904	R	DNA topoisomerase 2	complement(join(936471..938023,938146..942904))	Theileria orientalis strain Shintoku	20714602
TOT_020000456	CDS	TOT_020000456	NC_025261.1	943366	946011	R	conserved hypothetical protein	complement(join(943366..943425,943462..944754,944875..945396,945409..945582,945633..945881,945961..946011))	Theileria orientalis strain Shintoku	20714603
TOT_020000457	CDS	TOT_020000457	NC_025261.1	946737	947325	D	SNARE-interacting vesicle transport protein	join(946737..946861,946971..947058,947173..947325)	Theileria orientalis strain Shintoku	20714604
TOT_020000458	CDS	TOT_020000458	NC_025261.1	947457	949296	D	DNA polymerase delta small subunit	join(947457..947681,947769..947864,947890..948006,948132..948261,948294..948366,948397..948468,948499..948572,948632..948756,948790..948859,948892..948952,949077..949296)	Theileria orientalis strain Shintoku	20714605
TOT_020000459	CDS	TOT_020000459	NC_025261.1	949603	950749	D	conserved hypothetical protein	join(949603..949758,949976..950749)	Theileria orientalis strain Shintoku	20714606
TOT_020001060	CDS	TOT_020001060	NC_025261.1	950909	952015	R	transcription factor jumonji/aspartyl beta-hydroxylase domain containing protein; uncharacterized protein	complement(join(950909..951167,951246..951370,951463..951561,951593..952015))	Theileria orientalis strain Shintoku	20715151
TOT_020000461	CDS	TOT_020000461	NC_025261.1	952245	952952	R	conserved hypothetical protein	complement(952245..952952)	Theileria orientalis strain Shintoku	20714607
TOT_020000462	CDS	TOT_020000462	NC_025261.1	953065	953676	R	hypothetical protein	complement(join(953065..953447,953478..953590,953621..953676))	Theileria orientalis strain Shintoku	20714608
TOT_020001061	CDS	TOT_020001061	NC_025261.1	954811	956392	D	diacylglycerol kinase	join(954811..954958,955015..955087,955155..955278,955429..955569,955606..955860,955951..956049,956136..956231,956312..956392)	Theileria orientalis strain Shintoku	20715152
TOT_020000464	CDS	TOT_020000464	NC_025261.1	956450	959199	D	RNA processing protein	join(956450..956479,956519..956652,956719..956826,956881..957105,957150..957272,957305..957407,957505..958080,958239..958412,958564..958773,958861..959199)	Theileria orientalis strain Shintoku	20714609
TOT_020000465	CDS	TOT_020000465	NC_025261.1	959478	960252	R	conserved hypothetical protein	complement(join(959478..959606,959683..959739,959771..959848,959910..959963,960058..960122,960204..960252))	Theileria orientalis strain Shintoku	20714610
TOT_020000466	CDS	TOT_020000466	NC_025261.1	960383	961127	R	conserved hypothetical protein	complement(join(960383..960583,960621..961127))	Theileria orientalis strain Shintoku	20714611
TOT_020000467	CDS	TOT_020000467	NC_025261.1	961234	963676	D	conserved hypothetical protein	join(961234..961527,961607..962012,962088..963676)	Theileria orientalis strain Shintoku	20714612
TOT_020001062	CDS	TOT_020001062	NC_025261.1	963775	964197	R	splicing factor 3B subunit 5-like protein	complement(join(963775..963834,963901..964024,964106..964197))	Theileria orientalis strain Shintoku	20715153
TOT_020000469	CDS	TOT_020000469	NC_025261.1	964462	969718	D	conserved hypothetical protein	join(964462..964644,964700..964820,964895..965625,965689..966482,966768..967464,967531..967636,967720..968187,968254..968372,968462..968629,968767..968907,969012..969147,969273..969718)	Theileria orientalis strain Shintoku	20714613
TOT_020000470	CDS	TOT_020000470	NC_025261.1	969973	970439	D	conserved hypothetical protein	join(969973..970215,970293..970439)	Theileria orientalis strain Shintoku	20714614
TOT_020000471	CDS	TOT_020000471	NC_025261.1	970546	972147	R	conserved hypothetical protein	complement(join(970546..970647,970795..972147))	Theileria orientalis strain Shintoku	20714615
TOT_020000472	CDS	TOT_020000472	NC_025261.1	972396	973660	D	conserved hypothetical protein	join(972396..972505,972608..972962,973035..973178,973388..973660)	Theileria orientalis strain Shintoku	20714616
TOT_020000473	CDS	TOT_020000473	NC_025261.1	973872	975725	R	conserved hypothetical protein	complement(join(973872..973998,974056..974208,974363..974619,974649..975725))	Theileria orientalis strain Shintoku	20714617
TOT_020000474	CDS	TOT_020000474	NC_025261.1	976243	977262	D	P23-like protein; uncharacterized protein	join(976243..976247,976335..976634,976700..976761,976946..977262)	Theileria orientalis strain Shintoku	20714618
TOT_020001008	CDS	TOT_020001008	NC_025261.1	977570	978250	D	40S ribosomal protein S6	977570..978250	Theileria orientalis strain Shintoku	20715101
TOT_020000475	CDS	TOT_020000475	NC_025261.1	978372	979786	D	vacuolar ATP synthase subunit D	join(978372..978409,978484..978601,978750..978945,979129..979232,979338..979403,979534..979613,979678..979786)	Theileria orientalis strain Shintoku	20714619
TOT_020000476	CDS	TOT_020000476	NC_025261.1	979993	981147	D	protein of unknown function DUF544 family protein; uncharacterized protein	join(979993..980220,980251..981147)	Theileria orientalis strain Shintoku	20714620
TOT_020000477	CDS	TOT_020000477	NC_025261.1	981376	983977	D	DnaJ protein	join(981376..981745,981756..982042,982106..982182,982293..982408,982593..983441,983622..983977)	Theileria orientalis strain Shintoku	20714621
TOT_020000478	CDS	TOT_020000478	NC_025261.1	984351	985289	D	prefoldin domain containing protein; uncharacterized protein	984351..985289	Theileria orientalis strain Shintoku	20714622
TOT_020000479	CDS	TOT_020000479	NC_025261.1	985619	986839	R	thioredoxin-like fold domain containing protein; uncharacterized protein	complement(985619..986839)	Theileria orientalis strain Shintoku	20714623
TOT_020000480	CDS	TOT_020000480	NC_025261.1	987341	988624	D	protein of unknown function DUF300 family protein; uncharacterized protein	join(987341..987512,987543..988624)	Theileria orientalis strain Shintoku	20714624
TOT_020000481	CDS	TOT_020000481	NC_025261.1	988946	990452	R	CAMP-dependent protein kinase regulatory subunit	complement(join(988946..989092,989246..989594,989730..989797,989885..989972,990006..990064,990170..990238,990420..990452))	Theileria orientalis strain Shintoku	20714625
TOT_020000482	CDS	TOT_020000482	NC_025261.1	991222	991770	D	conserved hypothetical protein	join(991222..991356,991387..991649,991680..991770)	Theileria orientalis strain Shintoku	20714626
TOT_020000483	CDS	TOT_020000483	NC_025261.1	991943	992711	R	conserved hypothetical protein	complement(join(991943..992193,992324..992711))	Theileria orientalis strain Shintoku	20714627
TOT_020000484	CDS	TOT_020000484	NC_025261.1	994645	996612	D	conserved hypothetical protein	994645..996612	Theileria orientalis strain Shintoku	20714628
TOT_020000485	CDS	TOT_020000485	NC_025261.1	997001	999344	R	ATP-dependent RNA helicase	complement(join(997001..998652,998726..999035,999126..999344))	Theileria orientalis strain Shintoku	20714629
TOT_020000486	CDS	TOT_020000486	NC_025261.1	999809	1002099	D	conserved hypothetical protein	join(999809..999887,999930..1000021,1000127..1000714,1000750..1001439,1001497..1002099)	Theileria orientalis strain Shintoku	20714630
TOT_020000487	CDS	TOT_020000487	NC_025261.1	1002262	1004517	R	phosphate transporter family protein; uncharacterized protein	complement(1002262..1004517)	Theileria orientalis strain Shintoku	20714631
TOT_020000488	CDS	TOT_020000488	NC_025261.1	1004792	1005175	D	hypothetical protein	join(1004792..1005042,1005094..1005175)	Theileria orientalis strain Shintoku	20714632
TOT_020000489	CDS	TOT_020000489	NC_025261.1	1005249	1007534	R	phosphate transporter family protein; uncharacterized protein	complement(join(1005249..1006397,1006464..1007534))	Theileria orientalis strain Shintoku	20714633
TOT_020000490	CDS	TOT_020000490	NC_025261.1	1007812	1008717	D	conserved hypothetical protein	join(1007812..1007957,1008053..1008227,1008266..1008518,1008629..1008717)	Theileria orientalis strain Shintoku	20714634
TOT_020001063	CDS	TOT_020001063	NC_025261.1	1008803	1019140	D	cyclic nucleotide-binding domain containing protein; uncharacterized protein	join(1008803..1009411,1009490..1010898,1011448..1011838,1011992..1012620,1012654..1012831,1012961..1013886,1014100..1014879,1015030..1016368,1016486..1016953,1017179..1018127,1018347..1019140)	Theileria orientalis strain Shintoku	20715154
TOT_020000492	CDS	TOT_020000492	NC_025261.1	1019458	1022754	R	helicase/SANT-associated, DNA binding domain containing protein; uncharacterized protein	complement(join(1019458..1019553,1019743..1019990,1020231..1022754))	Theileria orientalis strain Shintoku	20714635
TOT_020000493	CDS	TOT_020000493	NC_025261.1	1023045	1024272	R	autophagy-related peptidase	complement(join(1023045..1023152,1023186..1023302,1023335..1023521,1023551..1023576,1023655..1024272))	Theileria orientalis strain Shintoku	20714636
TOT_020000494	CDS	TOT_020000494	NC_025261.1	1024752	1032428	R	conserved hypothetical protein	complement(join(1024752..1027437,1027810..1032428))	Theileria orientalis strain Shintoku	20714637
TOT_020000495	CDS	TOT_020000495	NC_025261.1	1033339	1035017	D	centromere/microtubule binding protein	join(1033339..1033422,1033535..1033811,1033866..1033930,1034160..1035017)	Theileria orientalis strain Shintoku	20714638
TOT_020000496	CDS	TOT_020000496	NC_025261.1	1035371	1038034	R	DNA helicase	complement(1035371..1038034)	Theileria orientalis strain Shintoku	20714639
TOT_020000497	CDS	TOT_020000497	NC_025261.1	1038458	1039498	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(1038458..1039498)	Theileria orientalis strain Shintoku	20714640
TOT_020000498	CDS	TOT_020000498	NC_025261.1	1040565	1042808	D	chromatin-binding protein	join(1040565..1040693,1040784..1041062,1041177..1042340,1042481..1042596,1042682..1042808)	Theileria orientalis strain Shintoku	20714641
TOT_020000499	CDS	TOT_020000499	NC_025261.1	1043475	1047491	R	guanylate-binding protein, N-terminal domain containing protein; uncharacterized protein	complement(join(1043475..1044480,1044559..1046024,1046088..1047191,1047222..1047491))	Theileria orientalis strain Shintoku	20714642
TOT_020000500	CDS	TOT_020000500	NC_025261.1	1047892	1049036	R	conserved hypothetical protein	complement(join(1047892..1048038,1048144..1048841,1048925..1049036))	Theileria orientalis strain Shintoku	20714643
TOT_020000501	CDS	TOT_020000501	NC_025261.1	1049093	1049423	D	hypothetical protein	join(1049093..1049147,1049323..1049423)	Theileria orientalis strain Shintoku	20714644
TOT_020000502	CDS	TOT_020000502	NC_025261.1	1049441	1049572	D	hypothetical protein	1049441..1049572	Theileria orientalis strain Shintoku	20714645
TOT_020000503	CDS	TOT_020000503	NC_025261.1	1050658	1052151	D	predicted protein	1050658..1052151	Theileria orientalis strain Shintoku	20714646
TOT_020000504	CDS	TOT_020000504	NC_025261.1	1052356	1052877	R	glycosyltransferase 28, C-terminal domain containing protein; uncharacterized protein	complement(1052356..1052877)	Theileria orientalis strain Shintoku	20714647
TOT_020000505	CDS	TOT_020000505	NC_025261.1	1052899	1053045	D	hypothetical protein	join(1052899..1052988,1053001..1053045)	Theileria orientalis strain Shintoku	20714648
TOT_020000506	CDS	TOT_020000506	NC_025261.1	1053108	1054512	R	LUC7 related family protein; uncharacterized protein	complement(join(1053108..1053327,1053405..1053522,1053682..1053844,1053912..1054007,1054041..1054152,1054232..1054284,1054366..1054512))	Theileria orientalis strain Shintoku	20714649
TOT_020000507	CDS	TOT_020000507	NC_025261.1	1054883	1058770	R	ATP-dependent RNA helicase	complement(join(1054883..1055018,1055059..1055243,1055510..1055855,1055886..1055963,1056013..1056066,1056126..1056433,1056550..1056992,1057113..1058585,1058722..1058770))	Theileria orientalis strain Shintoku	20714650
TOT_020000508	CDS	TOT_020000508	NC_025261.1	1058953	1062912	R	conserved hypothetical protein	complement(join(1058953..1059128,1059175..1059232,1059266..1059325,1059370..1059497,1059529..1060122,1060246..1062216,1062333..1062912))	Theileria orientalis strain Shintoku	20714651
TOT_020000509	CDS	TOT_020000509	NC_025261.1	1063019	1063594	R	conserved hypothetical protein	complement(join(1063019..1063250,1063281..1063594))	Theileria orientalis strain Shintoku	20714652
TOT_020000510	CDS	TOT_020000510	NC_025261.1	1063848	1065016	R	CDK-activating kinase assembly factor	complement(join(1063848..1063905,1064009..1064067,1064100..1064168,1064204..1064317,1064350..1064462,1064499..1064572,1064604..1064736,1064790..1064815,1064928..1065016))	Theileria orientalis strain Shintoku	20714653
TOT_020000511	CDS	TOT_020000511	NC_025261.1	1065114	1069690	D	C2 calcium-dependent membrane targeting domain containing protein; uncharacterized protein	join(1065114..1065193,1065273..1065672,1065745..1066086,1066129..1066270,1066303..1066647,1066774..1069634,1069649..1069690)	Theileria orientalis strain Shintoku	20714654
TOT_020000512	CDS	TOT_020000512	NC_025261.1	1069974	1074173	R	calcium-transporting ATPase	complement(join(1069974..1071384,1071460..1072663,1072961..1074173))	Theileria orientalis strain Shintoku	20714655
TOT_020000513	CDS	TOT_020000513	NC_025261.1	1074823	1077118	D	N2,N2-dimethylguanosine tRNA methyltransferase	join(1074823..1075069,1075110..1075927,1075991..1076443,1076550..1076632,1076675..1076836,1076989..1077118)	Theileria orientalis strain Shintoku	20714656
TOT_020000514	CDS	TOT_020000514	NC_025261.1	1077207	1077845	R	hypothetical protein	complement(join(1077207..1077322,1077357..1077453,1077502..1077560,1077689..1077845))	Theileria orientalis strain Shintoku	20714657
TOT_020000515	CDS	TOT_020000515	NC_025261.1	1078165	1079359	D	ubiquitin fusion degradation protein	join(1078165..1078332,1078392..1078517,1078600..1078730,1078764..1078857,1078930..1079151,1079291..1079359)	Theileria orientalis strain Shintoku	20714658
TOT_020000516	CDS	TOT_020000516	NC_025261.1	1079535	1080170	D	CHCH domain containing protein; uncharacterized protein	join(1079535..1079662,1079780..1079836,1079871..1079955,1079988..1080170)	Theileria orientalis strain Shintoku	20714659
TOT_020001009	CDS	TOT_020001009	NC_025261.1	1080368	1083398	R	DNA replication licensing factor	complement(join(1080368..1083189,1083320..1083353,1083396..1083398))	Theileria orientalis strain Shintoku	20715102
TOT_020000517	CDS	TOT_020000517	NC_025261.1	1083588	1084504	R	conserved hypothetical protein	complement(join(1083588..1083616,1083646..1083719,1083759..1083876,1083911..1084350,1084443..1084504))	Theileria orientalis strain Shintoku	20714660
TOT_020001064	CDS	TOT_020001064	NC_025261.1	1084648	1085598	R	conserved hypothetical protein	complement(1084648..1085598)	Theileria orientalis strain Shintoku	20715155
TOT_020000519	CDS	TOT_020000519	NC_025261.1	1085708	1085896	D	hypothetical protein	1085708..1085896	Theileria orientalis strain Shintoku	20714661
TOT_020001065	CDS	TOT_020001065	NC_025261.1	1086451	1086657	R	conserved hypothetical protein	complement(1086451..1086657)	Theileria orientalis strain Shintoku	20715156
TOT_020000521	CDS	TOT_020000521	NC_025261.1	1087292	1088203	D	conserved hypothetical protein	1087292..1088203	Theileria orientalis strain Shintoku	20714662
TOT_020000522	CDS	TOT_020000522	NC_025261.1	1088518	1090070	D	5'-3' exonuclease	join(1088518..1089523,1089612..1089739,1089834..1090070)	Theileria orientalis strain Shintoku	20714663
TOT_020000523	CDS	TOT_020000523	NC_025261.1	1090395	1095813	R	tetratricopeptide-like helical domain containing protein; uncharacterized protein	complement(join(1090395..1090940,1091028..1092208,1092357..1093063,1093274..1094294,1094397..1094737,1094870..1095567,1095712..1095813))	Theileria orientalis strain Shintoku	20714664
TOT_020000524	CDS	TOT_020000524	NC_025261.1	1096261	1096998	D	pre-mRNA branch site protein p14	join(1096261..1096334,1096369..1096451,1096496..1096637,1096669..1096750,1096834..1096998)	Theileria orientalis strain Shintoku	20714665
TOT_020000525	CDS	TOT_020000525	NC_025261.1	1097021	1097657	R	conserved hypothetical protein	complement(join(1097021..1097345,1097383..1097657))	Theileria orientalis strain Shintoku	20714666
TOT_020000526	CDS	TOT_020000526	NC_025261.1	1098123	1099176	D	conserved hypothetical protein	join(1098123..1098980,1099102..1099176)	Theileria orientalis strain Shintoku	20714667
TOT_020001066	CDS	TOT_020001066	NC_025261.1	1099267	1103440	D	isoleucyl-tRNA synthetase	join(1099267..1100689,1100876..1102076,1102347..1103312,1103344..1103440)	Theileria orientalis strain Shintoku	20715157
TOT_020000528	CDS	TOT_020000528	NC_025261.1	1103340	1105295	R	brain protein 44-like	complement(join(1103340..1103436,1103492..1103557,1103574..1103879,1103952..1105165,1105206..1105295))	Theileria orientalis strain Shintoku	20714668
TOT_020000529	CDS	TOT_020000529	NC_025261.1	1105635	1106303	D	U1 small nuclear ribonucleoprotein	1105635..1106303	Theileria orientalis strain Shintoku	20714669
TOT_020000530	CDS	TOT_020000530	NC_025261.1	1106452	1107730	D	NADH-cytochrome b5 reductase	join(1106452..1106699,1106732..1106932,1106964..1107341,1107403..1107730)	Theileria orientalis strain Shintoku	20714670
TOT_020000531	CDS	TOT_020000531	NC_025261.1	1107942	1108727	R	small GTPase	complement(join(1107942..1108369,1108400..1108545,1108582..1108727))	Theileria orientalis strain Shintoku	20714671
TOT_020000532	CDS	TOT_020000532	NC_025261.1	1109110	1110600	D	TAFII55 protein conserved region domain containing protein; uncharacterized protein	join(1109110..1110268,1110440..1110600)	Theileria orientalis strain Shintoku	20714672
TOT_020000533	CDS	TOT_020000533	NC_025261.1	1110817	1112553	D	lariat debranching enzyme	join(1110817..1110925,1110990..1111084,1111119..1111411,1111478..1111599,1111629..1111714,1111750..1112243,1112325..1112553)	Theileria orientalis strain Shintoku	20714673
TOT_020000534	CDS	TOT_020000534	NC_025261.1	1112657	1113361	R	conserved hypothetical protein	complement(1112657..1113361)	Theileria orientalis strain Shintoku	20714674
TOT_020000535	CDS	TOT_020000535	NC_025261.1	1113383	1115019	D	nucleolar protein Nop5	join(1113383..1113470,1113481..1113539,1113572..1113732,1113864..1115019)	Theileria orientalis strain Shintoku	20714675
TOT_020000536	CDS	TOT_020000536	NC_025261.1	1115119	1115427	R	hypothetical protein	complement(1115119..1115427)	Theileria orientalis strain Shintoku	20714676
TOT_020000537	CDS	TOT_020000537	NC_025261.1	1115462	1115587	D	hypothetical protein	1115462..1115587	Theileria orientalis strain Shintoku	20714677
TOT_020000538	CDS	TOT_020000538	NC_025261.1	1115636	1116262	D	hypothetical protein	join(1115636..1115685,1116169..1116262)	Theileria orientalis strain Shintoku	20714678
TOT_020000539	CDS	TOT_020000539	NC_025261.1	1116509	1117180	R	TS-Ikeda type piroplasm surface protein precursor	complement(1116509..1117180)	Theileria orientalis strain Shintoku	20714679
TOT_020000540	CDS	TOT_020000540	NC_025261.1	1117377	1118039	R	conserved hypothetical protein	complement(1117377..1118039)	Theileria orientalis strain Shintoku	20714680
TOT_020000541	CDS	TOT_020000541	NC_025261.1	1118398	1119564	R	conserved hypothetical protein	complement(join(1118398..1118556,1118610..1119179,1119312..1119379,1119477..1119564))	Theileria orientalis strain Shintoku	20714681
TOT_020000542	CDS	TOT_020000542	NC_025261.1	1119586	1120323	R	conserved hypothetical protein	complement(join(1119586..1119613,1119680..1120323))	Theileria orientalis strain Shintoku	20714682
TOT_020000543	CDS	TOT_020000543	NC_025261.1	1120846	1121604	R	conserved hypothetical protein	complement(join(1120846..1120996,1121027..1121127,1121168..1121524,1121560..1121604))	Theileria orientalis strain Shintoku	20714683
TOT_020000544	CDS	TOT_020000544	NC_025261.1	1121726	1123994	R	sulfate transporter	complement(join(1121726..1121866,1122009..1123994))	Theileria orientalis strain Shintoku	20714684
TOT_020000545	CDS	TOT_020000545	NC_025261.1	1124749	1124787	R	hypothetical protein	complement(1124749..1124787)	Theileria orientalis strain Shintoku	20714685
TOT_020000546	CDS	TOT_020000546	NC_025261.1	1125082	1125789	D	conserved hypothetical protein	join(1125082..1125129,1125161..1125368,1125436..1125546,1125578..1125789)	Theileria orientalis strain Shintoku	20714686
TOT_020000547	CDS	TOT_020000547	NC_025261.1	1126002	1126739	R	cyclophilin-RNA interacting protein	complement(1126002..1126739)	Theileria orientalis strain Shintoku	20714687
TOT_020000548	CDS	TOT_020000548	NC_025261.1	1126968	1127948	D	conserved hypothetical protein	join(1126968..1127643,1127755..1127948)	Theileria orientalis strain Shintoku	20714688
TOT_020000549	CDS	TOT_020000549	NC_025261.1	1128275	1130246	R	protein of unknown function DUF21 domain containing protein; uncharacterized protein	complement(join(1128275..1128445,1128608..1128886,1128968..1129146,1129392..1129930,1129969..1130246))	Theileria orientalis strain Shintoku	20714689
TOT_020001067	CDS	TOT_020001067	NC_025261.1	1130851	1131386	D	conserved hypothetical protein	join(1130851..1130925,1130967..1131386)	Theileria orientalis strain Shintoku	20715158
TOT_020001068	CDS	TOT_020001068	NC_025261.1	1131542	1133572	D	nucleolar protein	join(1131542..1131818,1131853..1131932,1131963..1132054,1132152..1132342,1132534..1132672,1132705..1133030,1133130..1133572)	Theileria orientalis strain Shintoku	20715159
TOT_020000551	CDS	TOT_020000551	NC_025261.1	1133910	1134791	R	GTPase	complement(1133910..1134791)	Theileria orientalis strain Shintoku	20714690
TOT_020000552	CDS	TOT_020000552	NC_025261.1	1135422	1136225	D	proteasome subunit y	1135422..1136225	Theileria orientalis strain Shintoku	20714691
TOT_020000553	CDS	TOT_020000553	NC_025261.1	1136442	1137215	D	conserved hypothetical protein	join(1136442..1136658,1136740..1137215)	Theileria orientalis strain Shintoku	20714692
TOT_020000554	CDS	TOT_020000554	NC_025261.1	1137452	1139899	D	peptidase S54, rhomboid family protein; uncharacterized protein	join(1137452..1138744,1138852..1139112,1139209..1139371,1139441..1139586,1139687..1139899)	Theileria orientalis strain Shintoku	20714693
TOT_020000555	CDS	TOT_020000555	NC_025261.1	1140199	1142024	R	peptidase S8 and S53, subtilisin, kexin, sedolisin domain containing protein; uncharacterized protein	complement(join(1140199..1141807,1142014..1142024))	Theileria orientalis strain Shintoku	20714694
TOT_020000556	CDS	TOT_020000556	NC_025261.1	1142346	1144241	D	NPL4 domain containing protein; uncharacterized protein	join(1142346..1142513,1142544..1142757,1142789..1142940,1143053..1143280,1143381..1144241)	Theileria orientalis strain Shintoku	20714695
TOT_020000557	CDS	TOT_020000557	NC_025261.1	1144548	1145219	R	proline synthetase associated protein	complement(1144548..1145219)	Theileria orientalis strain Shintoku	20714696
TOT_020000558	CDS	TOT_020000558	NC_025261.1	1145596	1147451	R	peptidase S54, rhomboid family protein; uncharacterized protein	complement(join(1145596..1145876,1145938..1146103,1146171..1146179,1146219..1146277,1146348..1146498,1146574..1146664,1146696..1147019,1147105..1147451))	Theileria orientalis strain Shintoku	20714697
TOT_020000559	CDS	TOT_020000559	NC_025261.1	1147583	1147964	R	conserved hypothetical protein	complement(join(1147583..1147671,1147718..1147824,1147858..1147964))	Theileria orientalis strain Shintoku	20714698
TOT_020001069	CDS	TOT_020001069	NC_025261.1	1148260	1149336	R	60S ribosomal protein L4/L1	complement(1148260..1149336)	Theileria orientalis strain Shintoku	20715160
TOT_020000561	CDS	TOT_020000561	NC_025261.1	1149544	1149651	R	hypothetical protein	complement(1149544..1149651)	Theileria orientalis strain Shintoku	20714699
TOT_020000562	CDS	TOT_020000562	NC_025261.1	1149931	1153209	R	conserved hypothetical protein	complement(join(1149931..1150544,1150725..1151313,1151368..1151449,1151582..1152033,1152106..1152247,1152290..1152607,1152686..1152922,1152998..1153209))	Theileria orientalis strain Shintoku	20714700
TOT_020000563	CDS	TOT_020000563	NC_025261.1	1153898	1155134	R	conserved hypothetical protein	complement(join(1153898..1154289,1154351..1154435,1154471..1154545,1154576..1154637,1154673..1154816,1154900..1154947,1155059..1155134))	Theileria orientalis strain Shintoku	20714701
TOT_020000564	CDS	TOT_020000564	NC_025261.1	1155136	1155450	R	conserved hypothetical protein	complement(1155136..1155450)	Theileria orientalis strain Shintoku	20714702
TOT_020000565	CDS	TOT_020000565	NC_025261.1	1155592	1156147	D	conserved hypothetical protein	join(1155592..1155887,1155928..1156147)	Theileria orientalis strain Shintoku	20714703
TOT_020000566	CDS	TOT_020000566	NC_025261.1	1156265	1156876	R	guanylate kinase	complement(1156265..1156876)	Theileria orientalis strain Shintoku	20714704
TOT_020000567	CDS	TOT_020000567	NC_025261.1	1157375	1162176	D	pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha	join(1157375..1157402,1157549..1157785,1157942..1158684,1158778..1162176)	Theileria orientalis strain Shintoku	20714705
TOT_020000568	CDS	TOT_020000568	NC_025261.1	1162989	1168343	D	conserved hypothetical protein	join(1162989..1164375,1164715..1164883,1164989..1166135,1166172..1166776,1167071..1167141,1167529..1168343)	Theileria orientalis strain Shintoku	20714706
TOT_020000569	CDS	TOT_020000569	NC_025261.1	1168481	1168600	R	hypothetical protein	complement(1168481..1168600)	Theileria orientalis strain Shintoku	20714707
TOT_020000570	CDS	TOT_020000570	NC_025261.1	1168697	1170382	R	peptidyl-prolyl cis-trans isomerase	complement(join(1168697..1169766,1169941..1170382))	Theileria orientalis strain Shintoku	20714708
TOT_020000571	CDS	TOT_020000571	NC_025261.1	1170545	1173604	D	conserved hypothetical protein	join(1170545..1170861,1170893..1170956,1170987..1171718,1171827..1172060,1172090..1172260,1172293..1172417,1172441..1172535,1172727..1173226,1173377..1173604)	Theileria orientalis strain Shintoku	20714709
TOT_020000572	CDS	TOT_020000572	NC_025261.1	1173830	1175549	R	conserved hypothetical protein	complement(join(1173830..1174846,1175061..1175549))	Theileria orientalis strain Shintoku	20714710
TOT_020000573	CDS	TOT_020000573	NC_025261.1	1175657	1178546	R	conserved hypothetical protein	complement(join(1175657..1176096,1176230..1177123,1177226..1178001,1178083..1178546))	Theileria orientalis strain Shintoku	20714711
TOT_020000574	CDS	TOT_020000574	NC_025261.1	1178890	1179966	D	casein kinase II subunit beta	join(1178890..1178997,1179175..1179387,1179454..1179780,1179901..1179966)	Theileria orientalis strain Shintoku	20714712
TOT_020000575	CDS	TOT_020000575	NC_025261.1	1180026	1180963	D	conserved hypothetical protein	join(1180026..1180125,1180227..1180339,1180391..1180460,1180609..1180730,1180820..1180963)	Theileria orientalis strain Shintoku	20714713
TOT_020000576	CDS	TOT_020000576	NC_025261.1	1181054	1181863	R	conserved hypothetical protein	complement(1181054..1181863)	Theileria orientalis strain Shintoku	20714714
TOT_020000577	CDS	TOT_020000577	NC_025261.1	1182024	1182502	D	conserved hypothetical protein	join(1182024..1182153,1182192..1182502)	Theileria orientalis strain Shintoku	20714715
TOT_020000578	CDS	TOT_020000578	NC_025261.1	1182761	1187335	R	conserved hypothetical protein	complement(join(1182761..1183003,1183035..1183108,1183307..1183472,1183538..1183849,1183954..1184069,1184156..1184463,1184577..1185107,1185210..1187335))	Theileria orientalis strain Shintoku	20714716
TOT_020000579	CDS	TOT_020000579	NC_025261.1	1187717	1189057	R	TLDc domain containing protein; uncharacterized protein	complement(1187717..1189057)	Theileria orientalis strain Shintoku	20714717
TOT_020000580	CDS	TOT_020000580	NC_025261.1	1189433	1192672	R	conserved hypothetical protein	complement(1189433..1192672)	Theileria orientalis strain Shintoku	20714718
TOT_020000581	CDS	TOT_020000581	NC_025261.1	1193186	1196539	R	conserved hypothetical protein	complement(1193186..1196539)	Theileria orientalis strain Shintoku	20714719
TOT_020000582	CDS	TOT_020000582	NC_025261.1	1197301	1198104	D	conserved hypothetical protein	1197301..1198104	Theileria orientalis strain Shintoku	20714720
TOT_020000583	CDS	TOT_020000583	NC_025261.1	1198185	1202948	R	conserved hypothetical protein	complement(join(1198185..1198502,1198798..1199362,1200028..1200104,1200265..1200399,1200597..1200689,1200877..1201005,1201135..1201666,1201871..1202122,1202185..1202306,1202338..1202448,1202478..1202948))	Theileria orientalis strain Shintoku	20714721
TOT_020000584	CDS	TOT_020000584	NC_025261.1	1203095	1205346	D	U4/U6 snRNP-associated protein	join(1203095..1203100,1203229..1203456,1203537..1204098,1204184..1204359,1204525..1204711,1204790..1204867,1204936..1205016,1205252..1205346)	Theileria orientalis strain Shintoku	20714722
TOT_020000585	CDS	TOT_020000585	NC_025261.1	1205544	1205992	R	ubiquitin-like protein	complement(join(1205544..1205635,1205815..1205992))	Theileria orientalis strain Shintoku	20714723
TOT_020000586	CDS	TOT_020000586	NC_025261.1	1206159	1208259	R	peptidyl-prolyl cis-trans isomerase	complement(join(1206159..1206212,1206334..1206402,1206440..1206531,1206718..1206808,1206849..1207242,1207331..1207428,1207500..1207651,1207740..1207805,1207901..1207990,1208040..1208259))	Theileria orientalis strain Shintoku	20714724
TOT_020000587	CDS	TOT_020000587	NC_025261.1	1208520	1210289	R	conserved hypothetical protein	complement(join(1208520..1208627,1208694..1210177,1210220..1210289))	Theileria orientalis strain Shintoku	20714725
TOT_020000588	CDS	TOT_020000588	NC_025261.1	1210640	1211554	R	proliferating cell nuclear antigen 2	complement(join(1210640..1211082,1211212..1211554))	Theileria orientalis strain Shintoku	20714726
TOT_020000589	CDS	TOT_020000589	NC_025261.1	1212177	1212376	R	hypothetical protein	complement(join(1212177..1212350,1212362..1212376))	Theileria orientalis strain Shintoku	20714727
TOT_020000590	CDS	TOT_020000590	NC_025261.1	1212448	1214957	D	conserved hypothetical protein	join(1212448..1212744,1212835..1213593,1213672..1213820,1213985..1214439,1214521..1214589,1214818..1214957)	Theileria orientalis strain Shintoku	20714728
TOT_020001070	CDS	TOT_020001070	NC_025261.1	1215374	1216373	D	transmembrane protein 17	join(1215374..1215524,1215786..1216037,1216120..1216373)	Theileria orientalis strain Shintoku	20715161
TOT_020000592	CDS	TOT_020000592	NC_025261.1	1216750	1224828	R	conserved hypothetical protein	complement(1216750..1224828)	Theileria orientalis strain Shintoku	20714729
TOT_020000593	CDS	TOT_020000593	NC_025261.1	1225141	1228005	R	conserved hypothetical protein	complement(join(1225141..1225541,1225613..1226201,1226480..1226748,1226874..1228005))	Theileria orientalis strain Shintoku	20714730
TOT_020000594	CDS	TOT_020000594	NC_025261.1	1228030	1229203	D	conserved hypothetical protein	join(1228030..1228494,1228543..1228656,1228752..1228807,1228879..1229023,1229096..1229203)	Theileria orientalis strain Shintoku	20714731
TOT_020000595	CDS	TOT_020000595	NC_025261.1	1229861	1231942	D	mitochondrial carrier protein	join(1229861..1231292,1231440..1231558,1231787..1231942)	Theileria orientalis strain Shintoku	20714732
TOT_020000596	CDS	TOT_020000596	NC_025261.1	1232323	1233305	D	hypothetical protein	join(1232323..1232355,1232787..1232958,1233055..1233209,1233228..1233305)	Theileria orientalis strain Shintoku	20714733
TOT_020000597	CDS	TOT_020000597	NC_025261.1	1233768	1234217	R	hypothetical protein	complement(1233768..1234217)	Theileria orientalis strain Shintoku	20714734
TOT_020000598	CDS	TOT_020000598	NC_025261.1	1234688	1236260	D	14-3-3 protein	join(1234688..1234763,1235083..1235165,1235295..1235516,1235589..1235758,1236023..1236260)	Theileria orientalis strain Shintoku	20714735
TOT_020000599	CDS	TOT_020000599	NC_025261.1	1237045	1237614	R	conserved hypothetical protein	complement(1237045..1237614)	Theileria orientalis strain Shintoku	20714736
TOT_020000600	CDS	TOT_020000600	NC_025261.1	1238224	1240012	R	Os06g0158600 protein; uncharacterized protein	complement(join(1238224..1238361,1238455..1238644,1238716..1238868,1238962..1239015,1239078..1239154,1239389..1239508,1239722..1240012))	Theileria orientalis strain Shintoku	20714737
TOT_020000601	CDS	TOT_020000601	NC_025261.1	1240742	1241842	R	histone H2A variant	complement(join(1240742..1241121,1241764..1241842))	Theileria orientalis strain Shintoku	20714738
TOT_020000602	CDS	TOT_020000602	NC_025261.1	1242607	1243882	R	transport protein particle (TRAPP) component, Bet3 family protein; uncharacterized protein	complement(join(1242607..1242690,1242921..1242973,1243078..1243259,1243770..1243882))	Theileria orientalis strain Shintoku	20714739
TOT_020000603	CDS	TOT_020000603	NC_025261.1	1244191	1246028	R	ATP-dependent RNA helicase	complement(join(1244191..1244260,1244450..1245356,1245461..1245629,1245927..1246028))	Theileria orientalis strain Shintoku	20714740
TOT_020000604	CDS	TOT_020000604	NC_025261.1	1246453	1246756	R	conserved hypothetical protein	complement(join(1246453..1246673,1246708..1246756))	Theileria orientalis strain Shintoku	20714741
TOT_020000605	CDS	TOT_020000605	NC_025261.1	1247815	1249770	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(1247815..1247944,1248140..1248462,1248804..1248890,1248922..1249770)	Theileria orientalis strain Shintoku	20714742
TOT_020000606	CDS	TOT_020000606	NC_025261.1	1249949	1253869	D	proteinase and amylase inhibitor domain containing protein; uncharacterized protein	join(1249949..1250723,1250778..1250969,1251192..1252260,1253113..1253869)	Theileria orientalis strain Shintoku	20714743
TOT_020000607	CDS	TOT_020000607	NC_025261.1	1253957	1255072	R	conserved hypothetical protein	complement(join(1253957..1254192,1254218..1254575,1254666..1254908,1255064..1255072))	Theileria orientalis strain Shintoku	20714744
TOT_020000608	CDS	TOT_020000608	NC_025261.1	1255181	1259973	R	thrombospondin, type I repeat containing protein	complement(join(1255181..1255546,1255636..1258901,1258993..1259046,1259077..1259265,1259364..1259621,1259823..1259973))	Theileria orientalis strain Shintoku	20714745
TOT_020000609	CDS	TOT_020000609	NC_025261.1	1260499	1260975	D	conserved hypothetical protein	join(1260499..1260602,1260683..1260781,1260930..1260975)	Theileria orientalis strain Shintoku	20714746
TOT_020000610	CDS	TOT_020000610	NC_025261.1	1261173	1261698	D	conserved hypothetical protein	join(1261173..1261283,1261417..1261698)	Theileria orientalis strain Shintoku	20714747
TOT_020001071	CDS	TOT_020001071	NC_025261.1	1261893	1263379	R	molecular chaperone	complement(join(1261893..1262120,1262193..1262274,1262363..1262445,1262634..1262905,1262996..1263137,1263219..1263341,1263371..1263379))	Theileria orientalis strain Shintoku	20715162
TOT_020001011	CDS	TOT_020001011	NC_025261.1	1263966	1264680	R	dimeric alpha-beta barrel domain containing protein; uncharacterized protein	complement(join(1263966..1264142,1264345..1264680))	Theileria orientalis strain Shintoku	20715103
TOT_020001012	CDS	TOT_020001012	NC_025261.1	1265037	1267049	R	leucyl/phenylalanyl-tRNA-protein transferase family protein; uncharacterized protein	complement(join(1265037..1265174,1265330..1265439,1265554..1265655,1265782..1265913,1265980..1266094,1266127..1266359,1266479..1267049))	Theileria orientalis strain Shintoku	20715104
TOT_020000613	CDS	TOT_020000613	NC_025261.1	1267332	1274009	D	conserved hypothetical protein	join(1267332..1268494,1268615..1269453,1269637..1269723,1269769..1271337,1271596..1272813,1272895..1273227,1273444..1274009)	Theileria orientalis strain Shintoku	20714748
TOT_020000614	CDS	TOT_020000614	NC_025261.1	1274136	1276335	R	sexual stage antigen s4845 family protein; uncharacterized protein	complement(join(1274136..1274300,1274323..1276335))	Theileria orientalis strain Shintoku	20714749
TOT_020000615	CDS	TOT_020000615	NC_025261.1	1276629	1277995	D	serine/threonine protein kinase	join(1276629..1276929,1277004..1277126,1277157..1277234,1277327..1277428,1277549..1277814,1277918..1277995)	Theileria orientalis strain Shintoku	20714750
TOT_020001072	CDS	TOT_020001072	NC_025261.1	1278038	1279956	D	ribosomal RNA assembly protein	join(1278038..1278130,1278210..1278310,1278476..1278578,1278679..1279041,1279228..1279332,1279531..1279956)	Theileria orientalis strain Shintoku	20715163
TOT_020000617	CDS	TOT_020000617	NC_025261.1	1280475	1281631	D	Target SNARE coiled-coil region domain containing protein; uncharacterized protein	join(1280475..1280597,1280628..1280671,1280722..1280836,1280898..1281031,1281101..1281157,1281254..1281330,1281363..1281422,1281525..1281631)	Theileria orientalis strain Shintoku	20714751
TOT_020000618	CDS	TOT_020000618	NC_025261.1	1281896	1282706	R	50S ribosomal protein L22	complement(join(1281896..1282414,1282554..1282706))	Theileria orientalis strain Shintoku	20714752
TOT_020000619	CDS	TOT_020000619	NC_025261.1	1283203	1286568	D	sodium/hydrogen exchanger	join(1283203..1283643,1283733..1283913,1284037..1284495,1284562..1284680,1284830..1285243,1285322..1285552,1285642..1285761,1285859..1286142,1286244..1286568)	Theileria orientalis strain Shintoku	20714753
TOT_020001073	CDS	TOT_020001073	NC_025261.1	1287164	1288014	D	splicing factor 3a subunit 2	join(1287164..1287181,1287294..1287525,1287648..1287748,1287931..1288014)	Theileria orientalis strain Shintoku	20715164
TOT_020000621	CDS	TOT_020000621	NC_025261.1	1288307	1290460	R	molecular chaperone protein DnaJ	complement(join(1288307..1289308,1289445..1289773,1289870..1289946,1290022..1290172,1290239..1290336,1290444..1290460))	Theileria orientalis strain Shintoku	20714754
TOT_020000622	CDS	TOT_020000622	NC_025261.1	1290660	1292494	D	GDP-mannose pyrophosphorylase	join(1290660..1290788,1290878..1290955,1291016..1291064,1291097..1291248,1291280..1291394,1291580..1291706,1291739..1291979,1292141..1292252,1292406..1292494)	Theileria orientalis strain Shintoku	20714755
TOT_020001074	CDS	TOT_020001074	NC_025261.1	1292573	1293318	D	ubiquitin-conjugating enzyme E2	join(1292573..1292701,1292875..1293067,1293149..1293318)	Theileria orientalis strain Shintoku	20715165
TOT_020000624	CDS	TOT_020000624	NC_025261.1	1293562	1295069	D	membrane attack complex component/perforin/complement C9 family protein; uncharacterized protein	join(1293562..1293589,1293809..1294005,1294218..1294405,1294436..1294614,1294759..1295069)	Theileria orientalis strain Shintoku	20714756
TOT_020000625	CDS	TOT_020000625	NC_025261.1	1295226	1297118	R	clathrin-coat assembly protein	complement(join(1295226..1295330,1295472..1295594,1295840..1295968,1296063..1296563,1296597..1296758,1296814..1296995,1297037..1297118))	Theileria orientalis strain Shintoku	20714757
TOT_020000626	CDS	TOT_020000626	NC_025261.1	1297568	1298722	D	conserved hypothetical protein	join(1297568..1297591,1297690..1297908,1297940..1298722)	Theileria orientalis strain Shintoku	20714758
TOT_020001075	CDS	TOT_020001075	NC_025261.1	1299277	1300846	D	0; Conserved hypothetical protein	join(1299277..1299832,1300070..1300257,1300342..1300596,1300724..1300846)	Theileria orientalis strain Shintoku	20715166
TOT_020001076	CDS	TOT_020001076	NC_025261.1	1301302	1302268	D	0; Conserved hypothetical protein	join(1301302..1301910,1301937..1302001,1302031..1302268)	Theileria orientalis strain Shintoku	20715167
TOT_020000628	CDS	TOT_020000628	NC_025261.1	1302304	1303836	D	heat shock protein DnaJ family protein; uncharacterized protein	join(1302304..1302435,1302670..1302803,1302927..1303162,1303285..1303502,1303566..1303619,1303711..1303836)	Theileria orientalis strain Shintoku	20714759
TOT_020000629	CDS	TOT_020000629	NC_025261.1	1304073	1309533	D	conserved hypothetical protein	join(1304073..1304248,1304312..1304445,1304492..1304640,1304725..1304830,1304943..1305001,1305083..1305161,1305235..1305302,1305374..1305601,1305659..1306339,1306544..1306768,1306919..1307210,1307388..1307833,1307901..1308078,1308254..1308321,1308676..1308833,1308956..1309090,1309374..1309533)	Theileria orientalis strain Shintoku	20714760
TOT_020000630	CDS	TOT_020000630	NC_025261.1	1309808	1310443	R	ribosomal protein L27 family protein; uncharacterized protein	complement(1309808..1310443)	Theileria orientalis strain Shintoku	20714761
TOT_020000631	CDS	TOT_020000631	NC_025261.1	1310529	1312055	R	hydrolase	complement(join(1310529..1311607,1311637..1311730,1311840..1312055))	Theileria orientalis strain Shintoku	20714762
TOT_020000632	CDS	TOT_020000632	NC_025261.1	1312252	1313442	R	conserved hypothetical protein	complement(join(1312252..1312583,1312632..1312705,1312736..1312866,1312924..1313127,1313410..1313442))	Theileria orientalis strain Shintoku	20714763
TOT_020000633	CDS	TOT_020000633	NC_025261.1	1313572	1314453	D	conserved hypothetical protein	join(1313572..1313782,1313873..1314453)	Theileria orientalis strain Shintoku	20714764
TOT_020000634	CDS	TOT_020000634	NC_025261.1	1314764	1315972	D	choline/ethanolamine kinase domain containing protein; uncharacterized protein	join(1314764..1315821,1315867..1315972)	Theileria orientalis strain Shintoku	20714765
TOT_020000635	CDS	TOT_020000635	NC_025261.1	1316426	1317630	D	choline/ethanolamine kinase domain containing protein; uncharacterized protein	join(1316426..1317477,1317525..1317630)	Theileria orientalis strain Shintoku	20714766
TOT_020000636	CDS	TOT_020000636	NC_025261.1	1317758	1319395	R	adenosylhomocysteinase	complement(join(1317758..1318887,1319056..1319395))	Theileria orientalis strain Shintoku	20714767
TOT_020001077	CDS	TOT_020001077	NC_025261.1	1319699	1319989	R	conserved hypothetical protein	complement(1319699..1319989)	Theileria orientalis strain Shintoku	20715168
TOT_020000638	CDS	TOT_020000638	NC_025261.1	1320052	1320544	D	choline/ethanolamine kinase	join(1320052..1320164,1320379..1320544)	Theileria orientalis strain Shintoku	20714768
TOT_020000639	CDS	TOT_020000639	NC_025261.1	1321049	1322254	D	choline/ethanolamine kinase	join(1321049..1322103,1322149..1322254)	Theileria orientalis strain Shintoku	20714769
TOT_020000640	CDS	TOT_020000640	NC_025261.1	1322708	1323916	D	choline/ethanolamine kinase	join(1322708..1323762,1323796..1323916)	Theileria orientalis strain Shintoku	20714770
TOT_020000641	CDS	TOT_020000641	NC_025261.1	1323870	1323962	R	hypothetical protein	complement(1323870..1323962)	Theileria orientalis strain Shintoku	20714771
TOT_020000642	CDS	TOT_020000642	NC_025261.1	1324504	1325653	D	choline/ethanolamine kinase	join(1324504..1325480,1325530..1325653)	Theileria orientalis strain Shintoku	20714772
TOT_020000643	CDS	TOT_020000643	NC_025261.1	1326168	1327154	D	choline/ethanolamine kinase	1326168..1327154	Theileria orientalis strain Shintoku	20714773
TOT_020000644	CDS	TOT_020000644	NC_025261.1	1328270	1332931	D	conserved hypothetical protein	1328270..1332931	Theileria orientalis strain Shintoku	20714774
TOT_020000645	CDS	TOT_020000645	NC_025261.1	1333298	1335650	R	cleavage stimulation factor subunit 1	complement(join(1333298..1333370,1333614..1333695,1333743..1333842,1334136..1334294,1334426..1334503,1334538..1334689,1334804..1334895,1334989..1335066,1335098..1335210,1335243..1335354,1335386..1335547,1335589..1335650))	Theileria orientalis strain Shintoku	20714775
TOT_020000646	CDS	TOT_020000646	NC_025261.1	1335863	1340278	D	transducin-like G-protein beta	join(1335863..1336052,1336103..1336378,1336499..1336568,1336609..1337065,1337215..1337320,1337510..1337779,1338013..1338136,1338180..1338384,1338537..1338740,1338938..1339081,1339220..1339896,1340005..1340278)	Theileria orientalis strain Shintoku	20714776
TOT_020000647	CDS	TOT_020000647	NC_025261.1	1340439	1341011	R	hypothetical protein	complement(1340439..1341011)	Theileria orientalis strain Shintoku	20714777
TOT_020000648	CDS	TOT_020000648	NC_025261.1	1341632	1342953	R	miTOT_ic checkpoint protein	complement(join(1341632..1342091,1342125..1342183,1342306..1342460,1342595..1342820,1342852..1342953))	Theileria orientalis strain Shintoku	20714778
TOT_020000649	CDS	TOT_020000649	NC_025261.1	1343183	1347054	R	serine/threonine protein kinase	complement(join(1343183..1344705,1344820..1345431,1345626..1347054))	Theileria orientalis strain Shintoku	20714779
TOT_020000650	CDS	TOT_020000650	NC_025261.1	1347417	1348195	D	phosphopanTOT_henoylcysteine decarboxylase	join(1347417..1347533,1347581..1347709,1347928..1348053,1348088..1348195)	Theileria orientalis strain Shintoku	20714780
TOT_020000651	CDS	TOT_020000651	NC_025261.1	1348220	1348969	D	Snf7 family protein; uncharacterized protein	join(1348220..1348667,1348755..1348969)	Theileria orientalis strain Shintoku	20714781
TOT_020000652	CDS	TOT_020000652	NC_025261.1	1349366	1352438	D	citrate synthase, mitochondrial precursor	join(1349366..1351003,1351302..1351392,1351479..1351940,1352128..1352438)	Theileria orientalis strain Shintoku	20714782
TOT_020000653	CDS	TOT_020000653	NC_025261.1	1352492	1356219	D	1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase	join(1352492..1352656,1352676..1352766,1352803..1352963,1353062..1353211,1353316..1353521,1353780..1354012,1354124..1354488,1354591..1355073,1355247..1355429,1355498..1355623,1355703..1355777,1355891..1356025,1356088..1356219)	Theileria orientalis strain Shintoku	20714783
TOT_020000654	CDS	TOT_020000654	NC_025261.1	1356467	1358042	R	conserved hypothetical protein	complement(join(1356467..1357884,1358009..1358042))	Theileria orientalis strain Shintoku	20714784
TOT_020000655	CDS	TOT_020000655	NC_025261.1	1359446	1364083	D	ABC transporter related domain containing protein; uncharacterized protein	1359446..1364083	Theileria orientalis strain Shintoku	20714785
TOT_020000656	CDS	TOT_020000656	NC_025261.1	1364622	1369172	D	ABC transporter	join(1364622..1365137,1365237..1368719,1368798..1369172)	Theileria orientalis strain Shintoku	20714786
TOT_020000657	CDS	TOT_020000657	NC_025261.1	1369994	1372017	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1369994..1371955,1371991..1372017)	Theileria orientalis strain Shintoku	20714787
TOT_020000658	CDS	TOT_020000658	NC_025261.1	1373012	1374996	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1373012..1374859,1374892..1374996)	Theileria orientalis strain Shintoku	20714788
TOT_020000659	CDS	TOT_020000659	NC_025261.1	1375265	1377482	R	CAMP-dependent protein kinase, beta-catalytic subunit	complement(join(1375265..1375379,1375462..1377482))	Theileria orientalis strain Shintoku	20714789
TOT_020001078	CDS	TOT_020001078	NC_025261.1	1378736	1379031	D	conserved hypothetical protein	join(1378736..1378738,1378770..1378829,1378859..1378921,1378951..1379031)	Theileria orientalis strain Shintoku	20715169
TOT_020000661	CDS	TOT_020000661	NC_025261.1	1379595	1381524	D	glycerol kinase	join(1379595..1380429,1380608..1380696,1380765..1380842,1380895..1381198,1381310..1381524)	Theileria orientalis strain Shintoku	20714790
TOT_020000662	CDS	TOT_020000662	NC_025261.1	1381846	1385004	R	membrane skeletal protein IMC1	complement(join(1381846..1383420,1383527..1383652,1383738..1384085,1384144..1385004))	Theileria orientalis strain Shintoku	20714791
TOT_020001079	CDS	TOT_020001079	NC_025261.1	1386419	1387044	D	conserved hypothetical protein	join(1386419..1386681,1386730..1386905,1386947..1387044)	Theileria orientalis strain Shintoku	20715170
TOT_020000664	CDS	TOT_020000664	NC_025261.1	1387180	1387884	D	conserved hypothetical protein	join(1387180..1387258,1387411..1387537,1387692..1387884)	Theileria orientalis strain Shintoku	20714792
TOT_020000665	CDS	TOT_020000665	NC_025261.1	1388034	1390223	R	conserved hypothetical protein	complement(join(1388034..1388368,1388606..1389059,1389195..1390223))	Theileria orientalis strain Shintoku	20714793
TOT_020000666	CDS	TOT_020000666	NC_025261.1	1390382	1391239	R	60S ribosomal protein L17	complement(join(1390382..1390633,1390931..1391239))	Theileria orientalis strain Shintoku	20714794
TOT_020000667	CDS	TOT_020000667	NC_025261.1	1392430	1393746	D	conserved hypothetical protein	1392430..1393746	Theileria orientalis strain Shintoku	20714795
TOT_020000668	CDS	TOT_020000668	NC_025261.1	1393961	1394899	R	conserved hypothetical protein	complement(1393961..1394899)	Theileria orientalis strain Shintoku	20714796
TOT_020000669	CDS	TOT_020000669	NC_025261.1	1395255	1396169	R	calmodulin	complement(join(1395255..1395409,1395598..1395708,1395818..1395922,1396091..1396169))	Theileria orientalis strain Shintoku	20714797
TOT_020000670	CDS	TOT_020000670	NC_025261.1	1397111	1400160	D	phosphatidylinositol transfer protein family protein; uncharacterized protein	join(1397111..1397155,1397186..1397334,1397565..1397751,1397782..1398312,1398490..1398509,1398654..1399147,1399346..1399590,1399657..1400160)	Theileria orientalis strain Shintoku	20714798
TOT_020000671	CDS	TOT_020000671	NC_025261.1	1400476	1400988	R	protein of unknown function DUF866, eukaryotic family protein; uncharacterized protein	complement(join(1400476..1400535,1400569..1400988))	Theileria orientalis strain Shintoku	20714799
TOT_020000672	CDS	TOT_020000672	NC_025261.1	1401064	1402948	R	cellular retinaldehyde-binding/triple function, C-terminal domain containing protein; uncharacterized protein	complement(join(1401064..1401302,1401434..1401839,1401927..1402414,1402521..1402676,1402759..1402948))	Theileria orientalis strain Shintoku	20714800
TOT_020000673	CDS	TOT_020000673	NC_025261.1	1403263	1403370	D	hypothetical protein	1403263..1403370	Theileria orientalis strain Shintoku	20714801
TOT_020000674	CDS	TOT_020000674	NC_025261.1	1403540	1404546	D	ribosome recycling factor family protein; uncharacterized protein	join(1403540..1403571,1403658..1403870,1403900..1404088,1404132..1404173,1404205..1404261,1404358..1404436,1404469..1404546)	Theileria orientalis strain Shintoku	20714802
TOT_020000675	CDS	TOT_020000675	NC_025261.1	1404748	1405659	R	RNA polymerase Rpb7, N-terminal domain containing protein; uncharacterized protein	complement(join(1404748..1404959,1405041..1405198,1405229..1405309,1405348..1405498,1405575..1405659))	Theileria orientalis strain Shintoku	20714803
TOT_020001080	CDS	TOT_020001080	NC_025261.1	1405851	1407953	D	0; Ngp	join(1405851..1405971,1406004..1406205,1406238..1406529,1406651..1406724,1406785..1406982,1407016..1407146,1407190..1407287,1407323..1407402,1407448..1407706,1407741..1407953)	Theileria orientalis strain Shintoku	20715171
TOT_020001081	CDS	TOT_020001081	NC_025261.1	1407978	1408577	D	Acyl carrier protein (ACP) family protein; uncharacterized protein	join(1407978..1408038,1408070..1408248,1408407..1408577)	Theileria orientalis strain Shintoku	20715172
TOT_020000677	CDS	TOT_020000677	NC_025261.1	1408744	1410216	D	actin/actin-like family protein; uncharacterized protein	1408744..1410216	Theileria orientalis strain Shintoku	20714804
TOT_020000678	CDS	TOT_020000678	NC_025261.1	1410566	1421806	R	conserved hypothetical protein	complement(1410566..1421806)	Theileria orientalis strain Shintoku	20714805
TOT_020000679	CDS	TOT_020000679	NC_025261.1	1422456	1423532	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1422456..1423532)	Theileria orientalis strain Shintoku	20714806
TOT_020000680	CDS	TOT_020000680	NC_025261.1	1424589	1438229	D	conserved hypothetical protein	join(1424589..1427582,1428114..1429104,1429324..1438229)	Theileria orientalis strain Shintoku	20714807
TOT_020000681	CDS	TOT_020000681	NC_025261.1	1438939	1439541	R	conserved hypothetical protein	complement(join(1438939..1439199,1439287..1439541))	Theileria orientalis strain Shintoku	20714808
TOT_020000682	CDS	TOT_020000682	NC_025261.1	1439734	1441846	D	phosphatidate cytidylyltransferase family protein; uncharacterized protein	join(1439734..1439881,1439918..1440164,1440258..1440429,1440462..1440615,1440655..1440866,1440899..1441020,1441184..1441243,1441275..1441371,1441540..1441659,1441690..1441749,1441781..1441846)	Theileria orientalis strain Shintoku	20714809
TOT_020000683	CDS	TOT_020000683	NC_025261.1	1441899	1442112	D	hypothetical protein	join(1441899..1441976,1441987..1442112)	Theileria orientalis strain Shintoku	20714810
TOT_020000684	CDS	TOT_020000684	NC_025261.1	1442653	1445034	D	protein transport protein	join(1442653..1443120,1443196..1445034)	Theileria orientalis strain Shintoku	20714811
TOT_020000685	CDS	TOT_020000685	NC_025261.1	1445412	1445909	D	small nuclear ribonucleoprotein	join(1445412..1445478,1445728..1445909)	Theileria orientalis strain Shintoku	20714812
TOT_020000686	CDS	TOT_020000686	NC_025261.1	1446295	1447885	D	conserved hypothetical protein	join(1446295..1446337,1446397..1446509,1446543..1446633,1446740..1446906,1446939..1447198,1447451..1447736,1447841..1447885)	Theileria orientalis strain Shintoku	20714813
TOT_020000687	CDS	TOT_020000687	NC_025261.1	1447954	1448776	R	conserved hypothetical protein	complement(join(1447954..1448095,1448254..1448449,1448509..1448776))	Theileria orientalis strain Shintoku	20714814
TOT_020000688	CDS	TOT_020000688	NC_025261.1	1449034	1451069	D	calcium-dependent protein kinase	join(1449034..1449073,1449107..1450728,1450821..1450916,1450980..1451069)	Theileria orientalis strain Shintoku	20714815
TOT_020000689	CDS	TOT_020000689	NC_025261.1	1451100	1453195	D	conserved hypothetical protein	join(1451100..1452056,1452208..1452549,1452842..1453195)	Theileria orientalis strain Shintoku	20714816
TOT_020000690	CDS	TOT_020000690	NC_025261.1	1453517	1454650	R	conserved hypothetical protein	complement(join(1453517..1453784,1453963..1454140,1454274..1454357,1454392..1454650))	Theileria orientalis strain Shintoku	20714817
TOT_020000691	CDS	TOT_020000691	NC_025261.1	1454968	1457318	D	GTPase activator	join(1454968..1455518,1455581..1455758,1455790..1455870,1456023..1456127,1456139..1456220,1456261..1456573,1456793..1457091,1457134..1457318)	Theileria orientalis strain Shintoku	20714818
TOT_020000692	CDS	TOT_020000692	NC_025261.1	1457572	1458350	R	UMP-CMP kinase	complement(join(1457572..1457762,1457845..1458072,1458124..1458286,1458324..1458350))	Theileria orientalis strain Shintoku	20714819
TOT_020000693	CDS	TOT_020000693	NC_025261.1	1458595	1458897	D	mitochondrial distribution and morphology family 35/apoptosis protein	join(1458595..1458639,1458675..1458806,1458838..1458897)	Theileria orientalis strain Shintoku	20714820
TOT_020000694	CDS	TOT_020000694	NC_025261.1	1458907	1459590	D	hypothetical protein	1458907..1459590	Theileria orientalis strain Shintoku	20714821
TOT_020000695	CDS	TOT_020000695	NC_025261.1	1459818	1464006	D	ubiquitin-activating enzyme E1	join(1459818..1459968,1460010..1460209,1460345..1460575,1460686..1460870,1460968..1461298,1461487..1461669,1461754..1461897,1461938..1462111,1462421..1462878,1463062..1463755,1463881..1464006)	Theileria orientalis strain Shintoku	20714822
TOT_020000696	CDS	TOT_020000696	NC_025261.1	1464031	1467071	D	HEAT repeat containing protein	join(1464031..1464366,1464406..1464498,1464597..1464674,1464686..1464911,1464964..1465033,1465167..1465604,1465636..1465711,1465806..1465922,1465978..1466073,1466164..1466223,1466280..1466353,1466465..1466545,1466577..1466736,1466952..1467071)	Theileria orientalis strain Shintoku	20714823
TOT_020000697	CDS	TOT_020000697	NC_025261.1	1467286	1468281	R	conserved hypothetical protein	complement(1467286..1468281)	Theileria orientalis strain Shintoku	20714824
TOT_020000698	CDS	TOT_020000698	NC_025261.1	1468574	1469769	D	TatD-like deoxyribonuclease	join(1468574..1468800,1468835..1468935,1469006..1469216,1469280..1469365,1469400..1469594,1469630..1469769)	Theileria orientalis strain Shintoku	20714825
TOT_020000699	CDS	TOT_020000699	NC_025261.1	1470241	1472930	D	kinesin-like protein	join(1470241..1470377,1470457..1470704,1470736..1470868,1470974..1471235,1471272..1472316,1472449..1472930)	Theileria orientalis strain Shintoku	20714826
TOT_020000700	CDS	TOT_020000700	NC_025261.1	1473137	1475971	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(1473137..1473488,1473619..1473834,1474071..1474423,1474706..1474821,1474945..1475371,1475402..1475500,1475535..1475813,1475906..1475971))	Theileria orientalis strain Shintoku	20714827
TOT_020000701	CDS	TOT_020000701	NC_025261.1	1476119	1478559	D	CDC6-like ATPase	join(1476119..1476273,1476322..1476630,1476660..1477019,1477142..1477533,1477665..1477852,1478044..1478167,1478338..1478515,1478529..1478559)	Theileria orientalis strain Shintoku	20714828
TOT_020000702	CDS	TOT_020000702	NC_025261.1	1478713	1479645	R	conserved hypothetical protein	complement(join(1478713..1478892,1478985..1479066,1479116..1479216,1479246..1479311,1479345..1479429,1479482..1479645))	Theileria orientalis strain Shintoku	20714829
TOT_020000703	CDS	TOT_020000703	NC_025261.1	1479733	1480958	D	4-diphosphocytidyl-2c-methyl-D-erythritol kinase	join(1479733..1479859,1479890..1480144,1480213..1480958)	Theileria orientalis strain Shintoku	20714830
TOT_020000704	CDS	TOT_020000704	NC_025261.1	1481248	1482047	R	50S ribosomal protein L28	complement(join(1481248..1481539,1481608..1481741,1481874..1481932,1481975..1482047))	Theileria orientalis strain Shintoku	20714831
TOT_020000705	CDS	TOT_020000705	NC_025261.1	1482713	1483390	D	conserved hypothetical protein	join(1482713..1482730,1482845..1483152,1483345..1483390)	Theileria orientalis strain Shintoku	20714832
TOT_020000706	CDS	TOT_020000706	NC_025261.1	1483618	1484964	R	eukaryotic translation initiation factor 2 beta	complement(join(1483618..1483793,1484053..1484195,1484278..1484420,1484499..1484572,1484657..1484725,1484813..1484903,1484935..1484964))	Theileria orientalis strain Shintoku	20714833
TOT_020000707	CDS	TOT_020000707	NC_025261.1	1485165	1486731	R	YOR3162c protein	complement(join(1485165..1485197,1485267..1485548,1485613..1485689,1485794..1485863,1485918..1486036,1486102..1486221,1486331..1486470,1486610..1486731))	Theileria orientalis strain Shintoku	20714834
TOT_020000708	CDS	TOT_020000708	NC_025261.1	1487047	1489050	R	ribonuclease CAF1 family protein; uncharacterized protein	complement(join(1487047..1487437,1487564..1489050))	Theileria orientalis strain Shintoku	20714835
TOT_020000709	CDS	TOT_020000709	NC_025261.1	1489381	1493284	D	Spc97/Spc98 family protein; uncharacterized protein	join(1489381..1489875,1489970..1491156,1491318..1491621,1491730..1491798,1492096..1492099,1492175..1492397,1492623..1492850,1492921..1492985,1493067..1493284)	Theileria orientalis strain Shintoku	20714836
TOT_020000710	CDS	TOT_020000710	NC_025261.1	1493771	1495618	R	major facilitator superfamily MFS-1 protein	complement(join(1493771..1495543,1495595..1495618))	Theileria orientalis strain Shintoku	20714837
TOT_020000711	CDS	TOT_020000711	NC_025261.1	1496165	1498339	R	conserved hypothetical protein	complement(join(1496165..1497938,1498254..1498339))	Theileria orientalis strain Shintoku	20714838
TOT_020000712	CDS	TOT_020000712	NC_025261.1	1498651	1500447	R	major facilitator superfamily MFS-1 protein	complement(1498651..1500447)	Theileria orientalis strain Shintoku	20714839
TOT_020000713	CDS	TOT_020000713	NC_025261.1	1500727	1502642	R	Phox-like domain containing protein; uncharacterized protein	complement(join(1500727..1500834,1500867..1500935,1500970..1501857,1502045..1502137,1502191..1502286,1502352..1502509,1502546..1502642))	Theileria orientalis strain Shintoku	20714840
TOT_020000714	CDS	TOT_020000714	NC_025261.1	1502783	1504409	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1502783..1503005,1503088..1503537,1503575..1503842,1503962..1504409)	Theileria orientalis strain Shintoku	20714841
TOT_020000715	CDS	TOT_020000715	NC_025261.1	1504706	1506726	R	vacuolar-protein sorting-associated protein	complement(join(1504706..1505336,1505578..1505814,1505944..1506032,1506064..1506157,1506192..1506285,1506409..1506642,1506684..1506726))	Theileria orientalis strain Shintoku	20714842
TOT_020000716	CDS	TOT_020000716	NC_025261.1	1507028	1508077	D	1-acylglycerol-3-phosphate O-acyltransferase	join(1507028..1507217,1507269..1507376,1507442..1507626,1507661..1507802,1507836..1507927,1507967..1508077)	Theileria orientalis strain Shintoku	20714843
TOT_020000717	CDS	TOT_020000717	NC_025261.1	1508374	1508538	R	hypothetical protein	complement(1508374..1508538)	Theileria orientalis strain Shintoku	20714844
TOT_020000718	CDS	TOT_020000718	NC_025261.1	1508593	1509201	D	zinc finger, CDGSH-type domain containing protein; uncharacterized protein	join(1508593..1508690,1508892..1509201)	Theileria orientalis strain Shintoku	20714845
TOT_020000719	CDS	TOT_020000719	NC_025261.1	1509476	1510192	R	conserved hypothetical protein	complement(1509476..1510192)	Theileria orientalis strain Shintoku	20714846
TOT_020000720	CDS	TOT_020000720	NC_025261.1	1511398	1515867	R	ABC transporter related domain containing protein; uncharacterized protein	complement(join(1511398..1514159,1515390..1515867))	Theileria orientalis strain Shintoku	20714847
TOT_020000721	CDS	TOT_020000721	NC_025261.1	1516966	1521522	R	ABC transporter related domain containing protein; uncharacterized protein	complement(1516966..1521522)	Theileria orientalis strain Shintoku	20714848
TOT_020000722	CDS	TOT_020000722	NC_025261.1	1522619	1527169	R	ABC transporter related domain containing protein; uncharacterized protein	complement(1522619..1527169)	Theileria orientalis strain Shintoku	20714849
TOT_020001082	CDS	TOT_020001082	NC_025261.1	1528717	1529598	R	conserved hypothetical protein	complement(1528717..1529598)	Theileria orientalis strain Shintoku	20715173
TOT_020000724	CDS	TOT_020000724	NC_025261.1	1531000	1533120	R	conserved hypothetical protein	complement(1531000..1533120)	Theileria orientalis strain Shintoku	20714850
TOT_020000725	CDS	TOT_020000725	NC_025261.1	1533340	1533456	R	hypothetical protein	complement(1533340..1533456)	Theileria orientalis strain Shintoku	20714851
TOT_020000726	CDS	TOT_020000726	NC_025261.1	1533647	1535651	R	ATP-dependent RNA helicase	complement(join(1533647..1533802,1533834..1533897,1533962..1534133,1534199..1534262,1534353..1534547,1534704..1534793,1534869..1535101,1535213..1535651))	Theileria orientalis strain Shintoku	20714852
TOT_020000727	CDS	TOT_020000727	NC_025261.1	1536237	1536672	D	small nuclear ribonucleoprotein	join(1536237..1536246,1536277..1536416,1536505..1536672)	Theileria orientalis strain Shintoku	20714853
TOT_020001083	CDS	TOT_020001083	NC_025261.1	1536912	1540364	D	conserved hypothetical protein	join(1536912..1536972,1537026..1537242,1537388..1537660,1537802..1538796,1539019..1539354,1539634..1540364)	Theileria orientalis strain Shintoku	20715174
TOT_020000729	CDS	TOT_020000729	NC_025261.1	1541452	1543070	D	conserved hypothetical protein	join(1541452..1541881,1542052..1543070)	Theileria orientalis strain Shintoku	20714854
TOT_020000730	CDS	TOT_020000730	NC_025261.1	1543149	1544771	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1543149..1543246,1543278..1543358,1543431..1543515,1543556..1543672,1543761..1543857,1543894..1543930,1544116..1544182,1544213..1544285,1544339..1544423,1544518..1544621,1544668..1544771))	Theileria orientalis strain Shintoku	20714855
TOT_020001084	CDS	TOT_020001084	NC_025261.1	1544947	1546154	R	initiation factor 4E	complement(join(1544947..1545161,1545230..1545381,1545471..1545589,1545814..1545957,1546044..1546154))	Theileria orientalis strain Shintoku	20715175
TOT_020000732	CDS	TOT_020000732	NC_025261.1	1546504	1547897	R	serine/threonine-protein kinase ripk4	complement(join(1546504..1546685,1546786..1546843,1547065..1547186,1547218..1547246,1547322..1547721,1547834..1547897))	Theileria orientalis strain Shintoku	20714856
TOT_020001085	CDS	TOT_020001085	NC_025261.1	1547967	1550646	R	ABC transporter	complement(join(1547967..1548279,1548462..1548973,1549108..1549562,1549707..1549959,1550111..1550368,1550542..1550646))	Theileria orientalis strain Shintoku	20715176
TOT_020000734	CDS	TOT_020000734	NC_025261.1	1550670	1550930	D	hypothetical protein	join(1550670..1550682,1550812..1550930)	Theileria orientalis strain Shintoku	20714857
TOT_020000735	CDS	TOT_020000735	NC_025261.1	1550988	1551092	D	hypothetical protein	1550988..1551092	Theileria orientalis strain Shintoku	20714858
TOT_020000736	CDS	TOT_020000736	NC_025261.1	1551098	1555626	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1551098..1551184,1551243..1551381,1551535..1551647,1551737..1551885,1552044..1552209,1552366..1552638,1552874..1554300,1554481..1554595,1554660..1554827,1554942..1555086,1555121..1555448,1555521..1555626))	Theileria orientalis strain Shintoku	20714859
TOT_020000737	CDS	TOT_020000737	NC_025261.1	1555690	1555800	D	hypothetical protein	1555690..1555800	Theileria orientalis strain Shintoku	20714860
TOT_020000738	CDS	TOT_020000738	NC_025261.1	1556260	1558710	D	conserved hypothetical protein	join(1556260..1558311,1558519..1558710)	Theileria orientalis strain Shintoku	20714861
TOT_020000739	CDS	TOT_020000739	NC_025261.1	1558778	1558915	R	hypothetical protein	complement(1558778..1558915)	Theileria orientalis strain Shintoku	20714862
TOT_020000740	CDS	TOT_020000740	NC_025261.1	1558996	1560481	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1558996..1559061,1559273..1560481))	Theileria orientalis strain Shintoku	20714863
TOT_020000741	CDS	TOT_020000741	NC_025261.1	1560563	1560679	R	hypothetical protein	complement(1560563..1560679)	Theileria orientalis strain Shintoku	20714864
TOT_020000742	CDS	TOT_020000742	NC_025261.1	1561835	1562518	D	hypothetical protein	1561835..1562518	Theileria orientalis strain Shintoku	20714865
TOT_020000743	CDS	TOT_020000743	NC_025261.1	1563029	1563904	D	conserved hypothetical protein	1563029..1563904	Theileria orientalis strain Shintoku	20714866
TOT_020000744	CDS	TOT_020000744	NC_025261.1	1564202	1565077	R	conserved hypothetical protein	complement(1564202..1565077)	Theileria orientalis strain Shintoku	20714867
TOT_020000745	CDS	TOT_020000745	NC_025261.1	1565349	1565978	R	protein of unknown function DUF1000 family protein; uncharacterized protein	complement(join(1565349..1565834,1565868..1565978))	Theileria orientalis strain Shintoku	20714868
TOT_020001086	CDS	TOT_020001086	NC_025261.1	1566956	1568560	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	1566956..1568560	Theileria orientalis strain Shintoku	20715177
TOT_020000746	CDS	TOT_020000746	NC_025261.1	1568682	1569074	D	conserved hypothetical protein	1568682..1569074	Theileria orientalis strain Shintoku	20714869
TOT_020000747	CDS	TOT_020000747	NC_025261.1	1569408	1571297	R	farnesyl-protein transferase beta subunit	complement(join(1569408..1570173,1570253..1570537,1570598..1571099,1571130..1571157,1571193..1571297))	Theileria orientalis strain Shintoku	20714870
TOT_020000748	CDS	TOT_020000748	NC_025261.1	1571445	1573828	D	tubulin-tyrosine ligase family protein; uncharacterized protein	join(1571445..1572798,1572870..1573828)	Theileria orientalis strain Shintoku	20714871
TOT_020000749	CDS	TOT_020000749	NC_025261.1	1574027	1578427	D	conserved hypothetical protein	join(1574027..1575123,1575208..1576136,1576569..1577289,1577941..1578427)	Theileria orientalis strain Shintoku	20714872
TOT_020000750	CDS	TOT_020000750	NC_025261.1	1578736	1579536	D	Fcf2 pre-rRNA processing domain containing protein; uncharacterized protein	join(1578736..1579015,1579100..1579536)	Theileria orientalis strain Shintoku	20714873
TOT_020000751	CDS	TOT_020000751	NC_025261.1	1579910	1583156	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(1579910..1580685,1580893..1582519,1582583..1582998,1583135..1583156))	Theileria orientalis strain Shintoku	20714874
TOT_020000752	CDS	TOT_020000752	NC_025261.1	1583815	1584441	R	conserved hypothetical protein	complement(1583815..1584441)	Theileria orientalis strain Shintoku	20714875
TOT_020000753	CDS	TOT_020000753	NC_025261.1	1584907	1585584	R	lipid-binding protein	complement(join(1584907..1585176,1585378..1585584))	Theileria orientalis strain Shintoku	20714876
TOT_020001087	CDS	TOT_020001087	NC_025261.1	1586418	1586984	D	60S ribosomal protein L18	1586418..1586984	Theileria orientalis strain Shintoku	20715178
TOT_020000755	CDS	TOT_020000755	NC_025261.1	1587589	1588796	D	60S ribosomal protein L18	join(1587589..1587591,1587806..1588061,1588492..1588796)	Theileria orientalis strain Shintoku	20714877
TOT_020000756	CDS	TOT_020000756	NC_025261.1	1589743	1589910	D	hypothetical protein	1589743..1589910	Theileria orientalis strain Shintoku	20714878
TOT_020000757	CDS	TOT_020000757	NC_025261.1	1590113	1591153	R	conserved hypothetical protein	complement(join(1590113..1590355,1590477..1590671,1590764..1591153))	Theileria orientalis strain Shintoku	20714879
TOT_020001088	CDS	TOT_020001088	NC_025261.1	1591213	1592909	R	small GTP binding protein rab6	complement(join(1591213..1591319,1591532..1591649,1591817..1591856,1591951..1592011,1592141..1592464,1592891..1592909))	Theileria orientalis strain Shintoku	20715179
TOT_020000759	CDS	TOT_020000759	NC_025261.1	1593035	1594279	R	SJCHGC06955 protein; uncharacterized protein	complement(join(1593035..1593612,1593682..1594279))	Theileria orientalis strain Shintoku	20714880
TOT_020000760	CDS	TOT_020000760	NC_025261.1	1594688	1595789	D	farnesyltransferase beta subunit	join(1594688..1594809,1594950..1595061,1595670..1595789)	Theileria orientalis strain Shintoku	20714881
TOT_020000761	CDS	TOT_020000761	NC_025261.1	1595964	1596722	D	hypothetical protein	1595964..1596722	Theileria orientalis strain Shintoku	20714882
TOT_020000762	CDS	TOT_020000762	NC_025261.1	1597203	1611354	R	conserved hypothetical protein	complement(join(1597203..1599078,1599322..1599496,1599548..1599835,1599896..1600193,1600323..1601426,1601472..1601639,1601814..1602047,1602087..1603558,1603650..1603906,1603973..1605606,1605826..1606945,1607186..1609430,1609551..1610552,1610625..1611354))	Theileria orientalis strain Shintoku	20714883
TOT_020000763	CDS	TOT_020000763	NC_025261.1	1611891	1613876	R	zinc finger, CCCH-type domain containing protein; uncharacterized protein	complement(1611891..1613876)	Theileria orientalis strain Shintoku	20714884
TOT_020000764	CDS	TOT_020000764	NC_025261.1	1614026	1615174	D	hypothetical protein	join(1614026..1614116,1614301..1614392,1614504..1614547,1614652..1614718,1614905..1615174)	Theileria orientalis strain Shintoku	20714885
TOT_020000765	CDS	TOT_020000765	NC_025261.1	1615191	1618203	R	conserved hypothetical protein	complement(join(1615191..1615301,1615533..1615711,1615790..1616317,1616376..1616643,1616890..1617049,1617127..1617305,1617338..1617396,1617516..1617860,1618140..1618203))	Theileria orientalis strain Shintoku	20714886
TOT_020000766	CDS	TOT_020000766	NC_025261.1	1618751	1619893	D	VHS domain containing protein; uncharacterized protein	join(1618751..1618890,1619029..1619893)	Theileria orientalis strain Shintoku	20714887
TOT_020000767	CDS	TOT_020000767	NC_025261.1	1620395	1622049	D	conserved hypothetical protein	join(1620395..1621813,1621930..1622049)	Theileria orientalis strain Shintoku	20714888
TOT_020001089	CDS	TOT_020001089	NC_025261.1	1622145	1622834	D	conserved hypothetical protein	join(1622145..1622327,1622607..1622834)	Theileria orientalis strain Shintoku	20715180
TOT_020000769	CDS	TOT_020000769	NC_025261.1	1622904	1623788	R	hypothetical protein	complement(join(1622904..1623026,1623055..1623251,1623323..1623788))	Theileria orientalis strain Shintoku	20714889
TOT_020000770	CDS	TOT_020000770	NC_025261.1	1624013	1625701	R	conserved hypothetical protein	complement(join(1624013..1624291,1624484..1625312,1625358..1625461,1625537..1625701))	Theileria orientalis strain Shintoku	20714890
TOT_020000771	CDS	TOT_020000771	NC_025261.1	1626572	1627315	D	conserved hypothetical protein	1626572..1627315	Theileria orientalis strain Shintoku	20714891
TOT_020000772	CDS	TOT_020000772	NC_025261.1	1627518	1628649	D	Os05g0546600 protein; uncharacterized protein	join(1627518..1627701,1627825..1627901,1627994..1628081,1628154..1628289,1628405..1628488,1628580..1628649)	Theileria orientalis strain Shintoku	20714892
TOT_020000773	CDS	TOT_020000773	NC_025261.1	1628710	1628817	R	hypothetical protein	complement(1628710..1628817)	Theileria orientalis strain Shintoku	20714893
TOT_020000774	CDS	TOT_020000774	NC_025261.1	1628867	1637422	R	Os06g0724700 protein; uncharacterized protein	complement(join(1628867..1629354,1629583..1630022,1630260..1631291,1631364..1631789,1631877..1632529,1632587..1633069,1633361..1633873,1633979..1634091,1634164..1634425,1634822..1635251,1635417..1635829,1635905..1637422))	Theileria orientalis strain Shintoku	20714894
TOT_020000775	CDS	TOT_020000775	NC_025261.1	1637914	1639179	D	chromatin assembly protein	join(1637914..1638300,1638385..1639179)	Theileria orientalis strain Shintoku	20714895
TOT_020000776	CDS	TOT_020000776	NC_025261.1	1639262	1640177	R	cytochrome C-type heme lyase	complement(join(1639262..1639354,1639422..1639530,1639599..1639685,1639743..1639902,1639973..1640177))	Theileria orientalis strain Shintoku	20714896
TOT_020000777	CDS	TOT_020000777	NC_025261.1	1640489	1641067	D	Os02g0602500 protein; uncharacterized protein	1640489..1641067	Theileria orientalis strain Shintoku	20714897
TOT_020000778	CDS	TOT_020000778	NC_025261.1	1641509	1643248	R	phosphatidylinositol/phosphatidylcholine transfer protein	complement(join(1641509..1641978,1642500..1642680,1642712..1642811,1642955..1643088,1643195..1643248))	Theileria orientalis strain Shintoku	20714898
TOT_020000779	CDS	TOT_020000779	NC_025261.1	1643682	1644258	D	hypothetical protein	join(1643682..1643756,1643810..1643879,1644218..1644258)	Theileria orientalis strain Shintoku	20714899
TOT_020000780	CDS	TOT_020000780	NC_025261.1	1644393	1646851	R	conserved hypothetical protein	complement(join(1644393..1644411,1644543..1646851))	Theileria orientalis strain Shintoku	20714900
TOT_020000781	CDS	TOT_020000781	NC_025261.1	1648620	1649996	D	conserved hypothetical protein	1648620..1649996	Theileria orientalis strain Shintoku	20714901
TOT_020000782	CDS	TOT_020000782	NC_025261.1	1650377	1654924	R	ABC transporter related domain containing protein; uncharacterized protein	complement(1650377..1654924)	Theileria orientalis strain Shintoku	20714902
TOT_020000783	CDS	TOT_020000783	NC_025261.1	1655737	1656261	D	hypothetical protein	join(1655737..1655837,1656198..1656261)	Theileria orientalis strain Shintoku	20714903
TOT_020000784	CDS	TOT_020000784	NC_025261.1	1656378	1656479	D	hypothetical protein	1656378..1656479	Theileria orientalis strain Shintoku	20714904
TOT_020000785	CDS	TOT_020000785	NC_025261.1	1656571	1657980	D	conserved hypothetical protein	1656571..1657980	Theileria orientalis strain Shintoku	20714905
TOT_020000786	CDS	TOT_020000786	NC_025261.1	1658520	1659361	R	ribosomal protein S2	complement(join(1658520..1659274,1659355..1659361))	Theileria orientalis strain Shintoku	20714906
TOT_020001090	CDS	TOT_020001090	NC_025261.1	1660102	1660812	D	conserved hypothetical protein	join(1660102..1660311,1660420..1660467,1660548..1660624,1660743..1660812)	Theileria orientalis strain Shintoku	20715181
TOT_020001091	CDS	TOT_020001091	NC_025261.1	1660938	1661021	D	conserved hypothetical protein	1660938..1661021	Theileria orientalis strain Shintoku	20715182
TOT_020001092	CDS	TOT_020001092	NC_025261.1	1662154	1663287	D	zinc finger, DHHC-type domain containing protein; uncharacterized protein	join(1662154..1662203,1662264..1662388,1662541..1662663,1662815..1662876,1662927..1663058,1663108..1663287)	Theileria orientalis strain Shintoku	20715183
TOT_020000790	CDS	TOT_020000790	NC_025261.1	1671821	1674702	D	conserved hypothetical protein	join(1671821..1671907,1671974..1672042,1672108..1672234,1672366..1673202,1673379..1673502,1673534..1674267,1674396..1674577,1674628..1674702)	Theileria orientalis strain Shintoku	20714907
TOT_020000791	CDS	TOT_020000791	NC_025261.1	1676042	1679035	R	conserved hypothetical protein	complement(1676042..1679035)	Theileria orientalis strain Shintoku	20714908
TOT_020000792	CDS	TOT_020000792	NC_025261.1	1679228	1679923	D	hypothetical protein	join(1679228..1679381,1679517..1679923)	Theileria orientalis strain Shintoku	20714909
TOT_020000793	CDS	TOT_020000793	NC_025261.1	1680052	1683272	D	conserved hypothetical protein	join(1680052..1680498,1680862..1682104,1682198..1682498,1682598..1682821,1683097..1683272)	Theileria orientalis strain Shintoku	20714910
TOT_020000794	CDS	TOT_020000794	NC_025261.1	1683522	1688155	R	cation transporting ATPase	complement(join(1683522..1687704,1687791..1687863,1687981..1688155))	Theileria orientalis strain Shintoku	20714911
TOT_020000795	CDS	TOT_020000795	NC_025261.1	1689090	1693329	D	DNA topoisomerase, type IIA, subunit A or C-terminal domain containing protein; uncharacterized protein	join(1689090..1689560,1689657..1689886,1689971..1690040,1690133..1690269,1690402..1690584,1690664..1690763,1690838..1691241,1691299..1692368,1692473..1692649,1692717..1692914,1693037..1693329)	Theileria orientalis strain Shintoku	20714912
TOT_020000796	CDS	TOT_020000796	NC_025261.1	1693387	1694918	R	conserved hypothetical protein	complement(join(1693387..1693788,1694037..1694424,1694461..1694918))	Theileria orientalis strain Shintoku	20714913
TOT_020001093	CDS	TOT_020001093	NC_025261.1	1695363	1697447	D	26S proteasome non-ATPase regulatory subunit 12	join(1695363..1695485,1695666..1696079,1696235..1696486,1696623..1696691,1696730..1696934,1697043..1697161,1697304..1697447)	Theileria orientalis strain Shintoku	20715184
TOT_020000798	CDS	TOT_020000798	NC_025261.1	1697890	1698813	D	translation initiation factor eIF-1A	join(1697890..1697905,1698070..1698153,1698262..1698346,1698534..1698813)	Theileria orientalis strain Shintoku	20714914
TOT_020000799	CDS	TOT_020000799	NC_025261.1	1699100	1700787	R	DNA-directed RNA polymerases I and III subunit	complement(join(1699100..1699179,1699435..1699539,1699662..1699748,1699789..1699888,1699970..1700088,1700190..1700282,1700334..1700430,1700551..1700787))	Theileria orientalis strain Shintoku	20714915
TOT_020000800	CDS	TOT_020000800	NC_025261.1	1701159	1701404	R	conserved hypothetical protein	complement(1701159..1701404)	Theileria orientalis strain Shintoku	20714916
TOT_020000801	CDS	TOT_020000801	NC_025261.1	1702238	1704017	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1702238..1702262,1702346..1702592,1702655..1702915,1703032..1703142,1703208..1703277,1703526..1703699,1703769..1704017)	Theileria orientalis strain Shintoku	20714917
TOT_020000802	CDS	TOT_020000802	NC_025261.1	1704837	1731272	D	peptidase C2, calpain family protein; uncharacterized protein	join(1704837..1706569,1706657..1707976,1708538..1709120,1709274..1710842,1710957..1711265,1711398..1711408,1711514..1711710,1712227..1712414,1712790..1715111,1715163..1715186,1715265..1716002,1716291..1716869,1717278..1719686,1719846..1720187,1720563..1720897,1721225..1725556,1725836..1726347,1727095..1727764,1728011..1731272)	Theileria orientalis strain Shintoku	20714918
TOT_020000803	CDS	TOT_020000803	NC_025261.1	1731404	1732056	R	hypothetical protein	complement(join(1731404..1731544,1731557..1731715,1731721..1732056))	Theileria orientalis strain Shintoku	20714919
TOT_020000804	CDS	TOT_020000804	NC_025261.1	1732182	1732334	D	hypothetical protein	1732182..1732334	Theileria orientalis strain Shintoku	20714920
TOT_020000805	CDS	TOT_020000805	NC_025261.1	1732953	1735022	D	conserved hypothetical protein	join(1732953..1734692,1734729..1735022)	Theileria orientalis strain Shintoku	20714921
TOT_020000806	CDS	TOT_020000806	NC_025261.1	1735946	1738072	D	conserved hypothetical protein	join(1735946..1736800,1736885..1738072)	Theileria orientalis strain Shintoku	20714922
TOT_020000807	CDS	TOT_020000807	NC_025261.1	1738381	1740100	D	conserved hypothetical protein	join(1738381..1738458,1738543..1738686,1738779..1738940,1738960..1739052,1739127..1739215,1739358..1739505,1739595..1739792,1739966..1740100)	Theileria orientalis strain Shintoku	20714923
TOT_020000808	CDS	TOT_020000808	NC_025261.1	1740270	1740608	D	mitochondrial ribosomal protein S14 precursor	1740270..1740608	Theileria orientalis strain Shintoku	20714924
TOT_020000809	CDS	TOT_020000809	NC_025261.1	1740684	1745777	R	conserved hypothetical protein	complement(join(1740684..1740739,1740938..1745777))	Theileria orientalis strain Shintoku	20714925
TOT_020000810	CDS	TOT_020000810	NC_025261.1	1746898	1748384	R	conserved hypothetical protein	complement(join(1746898..1747073,1747166..1747233,1747318..1747618,1747853..1748053,1748120..1748384))	Theileria orientalis strain Shintoku	20714926
TOT_020000811	CDS	TOT_020000811	NC_025261.1	1748626	1749114	R	conserved hypothetical protein	complement(join(1748626..1748695,1748730..1748805,1748837..1748864,1748923..1749114))	Theileria orientalis strain Shintoku	20714927
TOT_020000812	CDS	TOT_020000812	NC_025261.1	1749848	1752502	D	heat shock protein 70 precursor	join(1749848..1751894,1752432..1752502)	Theileria orientalis strain Shintoku	20714928
TOT_020000813	CDS	TOT_020000813	NC_025261.1	1752696	1754792	R	heat shock protein DnaJ, N-terminal domain containing protein; uncharacterized protein	complement(join(1752696..1752838,1752882..1754308,1754440..1754792))	Theileria orientalis strain Shintoku	20714929
TOT_020000814	CDS	TOT_020000814	NC_025261.1	1755162	1757114	D	eukaryotic peptide chain release factor	join(1755162..1755229,1755280..1755434,1755489..1755649,1755681..1755779,1756085..1756265,1756464..1756715,1756726..1757114)	Theileria orientalis strain Shintoku	20714930
TOT_020000815	CDS	TOT_020000815	NC_025261.1	1757244	1757888	R	conserved hypothetical protein	complement(1757244..1757888)	Theileria orientalis strain Shintoku	20714931
TOT_020000816	CDS	TOT_020000816	NC_025261.1	1758266	1759324	R	conserved hypothetical protein	complement(1758266..1759324)	Theileria orientalis strain Shintoku	20714932
TOT_020000817	CDS	TOT_020000817	NC_025261.1	1759538	1762471	R	pentatricopeptide repeat containing protein	complement(join(1759538..1759688,1759819..1760187,1760390..1760868,1760910..1760969,1761001..1761564,1761594..1761781,1761811..1761984,1762015..1762290,1762378..1762471))	Theileria orientalis strain Shintoku	20714933
TOT_020000818	CDS	TOT_020000818	NC_025261.1	1763249	1771261	R	thymidylate synthase, C-terminal domain containing protein; uncharacterized protein	complement(1763249..1771261)	Theileria orientalis strain Shintoku	20714934
TOT_020000819	CDS	TOT_020000819	NC_025261.1	1773074	1774307	R	conserved hypothetical protein	complement(join(1773074..1774185,1774250..1774307))	Theileria orientalis strain Shintoku	20714935
TOT_020000820	CDS	TOT_020000820	NC_025261.1	1774551	1775150	R	conserved hypothetical protein	complement(1774551..1775150)	Theileria orientalis strain Shintoku	20714936
TOT_020000821	CDS	TOT_020000821	NC_025261.1	1775633	1785343	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1775633..1785343)	Theileria orientalis strain Shintoku	20714937
TOT_020000822	CDS	TOT_020000822	NC_025261.1	1785418	1785975	D	hypothetical protein	join(1785418..1785508,1785593..1785691,1785878..1785975)	Theileria orientalis strain Shintoku	20714938
TOT_020000823	CDS	TOT_020000823	NC_025261.1	1786515	1793029	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1786515..1788452,1788708..1788831,1789473..1791163,1791201..1791298,1791727..1793029))	Theileria orientalis strain Shintoku	20714939
TOT_020000824	CDS	TOT_020000824	NC_025261.1	1793041	1793590	D	hypothetical protein	join(1793041..1793146,1793505..1793590)	Theileria orientalis strain Shintoku	20714940
TOT_020000825	CDS	TOT_020000825	NC_025261.1	1793591	1795798	R	hypothetical protein	complement(1793591..1795798)	Theileria orientalis strain Shintoku	20714941
TOT_020000826	CDS	TOT_020000826	NC_025261.1	1796630	1796743	D	hypothetical protein	1796630..1796743	Theileria orientalis strain Shintoku	20714942
TOT_020000827	CDS	TOT_020000827	NC_025261.1	1796808	1798688	R	conserved hypothetical protein	complement(join(1796808..1796897,1796929..1797034,1797421..1797562,1797939..1798060,1798213..1798355,1798515..1798688))	Theileria orientalis strain Shintoku	20714943
TOT_020000828	CDS	TOT_020000828	NC_025261.1	1799130	1799449	R	hypothetical protein	complement(join(1799130..1799249,1799312..1799449))	Theileria orientalis strain Shintoku	20714944
TOT_020000829	CDS	TOT_020000829	NC_025261.1	1799557	1800073	R	conserved hypothetical protein	complement(join(1799557..1799610,1799643..1799780,1799879..1800073))	Theileria orientalis strain Shintoku	20714945
TOT_020000830	CDS	TOT_020000830	NC_025261.1	1801104	1804040	R	conserved hypothetical protein	complement(join(1801104..1801225,1801345..1802111,1802300..1802487,1802725..1802919,1802979..1803043,1803135..1803216,1803306..1803420,1803595..1803824,1803936..1804040))	Theileria orientalis strain Shintoku	20714946
TOT_020000831	CDS	TOT_020000831	NC_025261.1	1804561	1804998	R	hypothetical protein	complement(1804561..1804998)	Theileria orientalis strain Shintoku	20714947
TOT_020000832	CDS	TOT_020000832	NC_025261.1	1805592	1805804	D	hypothetical protein	1805592..1805804	Theileria orientalis strain Shintoku	20714948
TOT_020000833	CDS	TOT_020000833	NC_025261.1	1805993	1810770	D	ubiquitin carboxyl-terminal hydrolase	join(1805993..1806266,1806304..1806465,1806585..1806721,1806781..1806877,1807036..1807091,1807370..1807531,1807797..1807914,1807986..1808073,1808245..1808516,1808667..1808873,1809109..1809248,1809280..1809406,1809527..1810770)	Theileria orientalis strain Shintoku	20714949
TOT_020000834	CDS	TOT_020000834	NC_025261.1	1811329	1812348	R	conserved hypothetical protein	complement(1811329..1812348)	Theileria orientalis strain Shintoku	20714950
TOT_020000835	CDS	TOT_020000835	NC_025261.1	1812899	1816064	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1812899..1812979,1813084..1813208,1813235..1814189,1814446..1814510,1814528..1816064))	Theileria orientalis strain Shintoku	20714951
TOT_020000836	CDS	TOT_020000836	NC_025261.1	1817562	1819904	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1817562..1819904	Theileria orientalis strain Shintoku	20714952
TOT_020000837	CDS	TOT_020000837	NC_025261.1	1820540	1821715	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1820540..1821715)	Theileria orientalis strain Shintoku	20714953
TOT_020000838	CDS	TOT_020000838	NC_025261.1	1822048	1831061	R	CPSF A subunit, C-terminal domain containing protein; uncharacterized protein	complement(join(1822048..1822131,1822153..1822317,1822967..1823039,1823144..1823367,1823682..1823765,1823895..1824084,1824373..1826363,1826427..1826950,1827563..1828606,1829045..1830338,1830582..1831061))	Theileria orientalis strain Shintoku	20714954
TOT_020000839	CDS	TOT_020000839	NC_025261.1	1832656	1835442	D	GAF domain containing protein; uncharacterized protein	1832656..1835442	Theileria orientalis strain Shintoku	20714955
TOT_020000840	CDS	TOT_020000840	NC_025261.1	1835981	1837651	R	conserved hypothetical protein	complement(1835981..1837651)	Theileria orientalis strain Shintoku	20714956
TOT_020000841	CDS	TOT_020000841	NC_025261.1	1838295	1843568	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1838295..1838749,1838975..1843568)	Theileria orientalis strain Shintoku	20714957
TOT_020000842	CDS	TOT_020000842	NC_025261.1	1844073	1845010	R	conserved hypothetical protein	complement(join(1844073..1844130,1844218..1844621,1844681..1844759,1844841..1844880,1844935..1845010))	Theileria orientalis strain Shintoku	20714958
TOT_020000843	CDS	TOT_020000843	NC_025261.1	1845463	1848162	D	asparaginyl-tRNA synthetase	join(1845463..1847149,1847399..1847596,1847924..1848162)	Theileria orientalis strain Shintoku	20714959
TOT_020000844	CDS	TOT_020000844	NC_025261.1	1848579	1849412	R	conserved hypothetical protein	complement(1848579..1849412)	Theileria orientalis strain Shintoku	20714960
TOT_020000845	CDS	TOT_020000845	NC_025261.1	1849626	1851239	R	hypothetical protein	complement(join(1849626..1849645,1849665..1849855,1850035..1851239))	Theileria orientalis strain Shintoku	20714961
TOT_020000846	CDS	TOT_020000846	NC_025261.1	1852104	1856133	R	ankyrin repeat containing protein	complement(join(1852104..1852494,1852643..1852955,1853100..1853206,1853289..1853383,1853671..1853752,1853837..1853985,1854324..1854591,1854844..1854973,1855061..1855113,1855351..1855573,1855725..1856133))	Theileria orientalis strain Shintoku	20714962
TOT_020000847	CDS	TOT_020000847	NC_025261.1	1856967	1858824	D	ELM2 domain containing protein; uncharacterized protein	join(1856967..1857023,1857282..1857362,1857440..1858043,1858131..1858247,1858444..1858599,1858685..1858824)	Theileria orientalis strain Shintoku	20714963
TOT_020000848	CDS	TOT_020000848	NC_025261.1	1858938	1860438	R	ovarian tumour, otubain domain containing protein; uncharacterized protein	complement(join(1858938..1859027,1859276..1859404,1859710..1859866,1860103..1860205,1860315..1860438))	Theileria orientalis strain Shintoku	20714964
TOT_020000849	CDS	TOT_020000849	NC_025261.1	1860785	1860907	D	hypothetical protein	1860785..1860907	Theileria orientalis strain Shintoku	20714965
TOT_020000850	CDS	TOT_020000850	NC_025261.1	1860995	1862203	R	hypothetical protein	complement(join(1860995..1861185,1861393..1862203))	Theileria orientalis strain Shintoku	20714966
TOT_020000851	CDS	TOT_020000851	NC_025261.1	1862609	1863248	R	hypothetical protein	complement(join(1862609..1862817,1862898..1863012,1863108..1863248))	Theileria orientalis strain Shintoku	20714967
TOT_020000852	CDS	TOT_020000852	NC_025261.1	1863385	1864962	R	conserved hypothetical protein	complement(join(1863385..1863455,1863473..1864685,1864933..1864962))	Theileria orientalis strain Shintoku	20714968
TOT_020000853	CDS	TOT_020000853	NC_025261.1	1865508	1866612	D	conserved hypothetical protein	join(1865508..1865627,1865772..1865856,1866085..1866200,1866313..1866390,1866511..1866612)	Theileria orientalis strain Shintoku	20714969
TOT_020000854	CDS	TOT_020000854	NC_025261.1	1867155	1868504	R	dolichol phosphate mannose synthase	complement(join(1867155..1867251,1867332..1867443,1867550..1867612,1867783..1868171,1868401..1868504))	Theileria orientalis strain Shintoku	20714970
TOT_020000855	CDS	TOT_020000855	NC_025261.1	1869620	1872496	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1869620..1872496	Theileria orientalis strain Shintoku	20714971
TOT_020000856	CDS	TOT_020000856	NC_025261.1	1873507	1876014	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1873507..1875495,1875550..1876014)	Theileria orientalis strain Shintoku	20714972
TOT_020000857	CDS	TOT_020000857	NC_025261.1	1877607	1884772	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1877607..1880533,1881658..1884268,1884410..1884772)	Theileria orientalis strain Shintoku	20714973
TOT_020000858	CDS	TOT_020000858	NC_025261.1	1885257	1886812	R	conserved hypothetical protein	complement(join(1885257..1885324,1885560..1886521,1886769..1886812))	Theileria orientalis strain Shintoku	20714974
TOT_020000859	CDS	TOT_020000859	NC_025261.1	1887168	1889883	R	CTP:phosphorylcholine cytidylyltransferase	complement(join(1887168..1887314,1887491..1888188,1888298..1888502,1888680..1888824,1889297..1889388,1889512..1889883))	Theileria orientalis strain Shintoku	20714975
TOT_020000860	CDS	TOT_020000860	NC_025261.1	1890933	1892467	R	formin binding protein 3	complement(join(1890933..1891091,1891218..1891761,1891850..1892157,1892393..1892467))	Theileria orientalis strain Shintoku	20714976
TOT_020000861	CDS	TOT_020000861	NC_025261.1	1892645	1894191	R	NSF attachment protein family protein; uncharacterized protein	complement(join(1892645..1892707,1892976..1893033,1893065..1893117,1893176..1893364,1893423..1893685,1893817..1893939,1894053..1894191))	Theileria orientalis strain Shintoku	20714977
TOT_020001094	CDS	TOT_020001094	NC_025261.1	1894514	1896095	R	CDP-diacylglycerol-inositol 3-phosphatidyltransferase	complement(join(1894514..1894603,1894692..1894738,1894858..1894953,1895101..1895177,1895275..1895329,1895447..1895545,1895760..1895894,1896050..1896095))	Theileria orientalis strain Shintoku	20715185
TOT_020000863	CDS	TOT_020000863	NC_025261.1	1896457	1898127	D	tRNA methyltransferase complex GCD14 subunit family protein; uncharacterized protein	join(1896457..1896651,1897000..1897098,1897207..1897276,1897356..1897458,1897542..1897758,1897790..1897874,1897913..1898127)	Theileria orientalis strain Shintoku	20714978
TOT_020000864	CDS	TOT_020000864	NC_025261.1	1898750	1899382	D	conserved hypothetical protein	1898750..1899382	Theileria orientalis strain Shintoku	20714979
TOT_020000865	CDS	TOT_020000865	NC_025261.1	1899756	1902608	D	cathepsin-like cysteine protease	join(1899756..1899851,1899978..1900246,1900376..1900431,1900495..1900548,1900650..1901241,1901347..1901402,1901557..1901696,1901863..1901978,1902014..1902150,1902191..1902253,1902358..1902608)	Theileria orientalis strain Shintoku	20714980
TOT_020000866	CDS	TOT_020000866	NC_025261.1	1903098	1904027	R	SJCHGC08802 protein; uncharacterized protein	complement(join(1903098..1903541,1903749..1904027))	Theileria orientalis strain Shintoku	20714981
TOT_020000867	CDS	TOT_020000867	NC_025261.1	1904392	1905656	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	join(1904392..1904467,1904705..1904848,1904926..1905107,1905172..1905227,1905545..1905656)	Theileria orientalis strain Shintoku	20714982
TOT_020000868	CDS	TOT_020000868	NC_025261.1	1905810	1908398	R	conserved hypothetical protein	complement(1905810..1908398)	Theileria orientalis strain Shintoku	20714983
TOT_020000869	CDS	TOT_020000869	NC_025261.1	1910165	1912062	R	Myb transcription factor family protein; uncharacterized protein	complement(join(1910165..1910272,1910334..1910879,1910982..1911246,1911338..1912062))	Theileria orientalis strain Shintoku	20714984
TOT_020000870	CDS	TOT_020000870	NC_025261.1	1912253	1914832	R	protein kinase, core domain containing protein; uncharacterized protein	complement(join(1912253..1912304,1912337..1912480,1912762..1912815,1912947..1913007,1913192..1913435,1913577..1913652,1913757..1914071,1914408..1914550,1914737..1914786,1914823..1914832))	Theileria orientalis strain Shintoku	20714985
TOT_020000871	CDS	TOT_020000871	NC_025261.1	1915339	1916423	R	ADP-ribosylation factor	complement(join(1915339..1915456,1915515..1915585,1915644..1915784,1915869..1916036,1916175..1916423))	Theileria orientalis strain Shintoku	20714986
TOT_020000872	CDS	TOT_020000872	NC_025261.1	1917041	1918047	D	primosome PriB/single-strand DNA-binding family protein; uncharacterized protein	join(1917041..1917265,1917340..1917453,1917561..1917649,1917681..1917733,1917899..1918047)	Theileria orientalis strain Shintoku	20714987
TOT_020001014	CDS	TOT_020001014	NC_025261.1	1918301	1920424	D	DNA primase small subunit	join(1918301..1918355,1918439..1918486,1918599..1918687,1918814..1918886,1919061..1919867,1919990..1920058,1920220..1920249,1920279..1920365,1920399..1920424)	Theileria orientalis strain Shintoku	20715105
TOT_020001015	CDS	TOT_020001015	NC_025261.1	1920556	1923026	D	CTP synthase	join(1920556..1920726,1920756..1920920,1921076..1921348,1921416..1921568,1921657..1921740,1921870..1922101,1922180..1922275,1922422..1923026)	Theileria orientalis strain Shintoku	20715106
TOT_020000873	CDS	TOT_020000873	NC_025261.1	1923198	1923377	D	hypothetical protein	join(1923198..1923261,1923313..1923377)	Theileria orientalis strain Shintoku	20714988
TOT_020000874	CDS	TOT_020000874	NC_025261.1	1923784	1924592	D	subunit of proteaseome activator complex	join(1923784..1923945,1923981..1924097,1924131..1924214,1924428..1924592)	Theileria orientalis strain Shintoku	20714989
TOT_020000875	CDS	TOT_020000875	NC_025261.1	1925792	1926988	D	conserved hypothetical protein	join(1925792..1925993,1926171..1926988)	Theileria orientalis strain Shintoku	20714990
TOT_020000876	CDS	TOT_020000876	NC_025261.1	1928142	1929173	D	hypothetical protein	1928142..1929173	Theileria orientalis strain Shintoku	20714991
TOT_020000877	CDS	TOT_020000877	NC_025261.1	1929552	1929860	R	hypothetical protein	complement(join(1929552..1929768,1929823..1929860))	Theileria orientalis strain Shintoku	20714992
TOT_020000878	CDS	TOT_020000878	NC_025261.1	1930182	1932240	D	conserved hypothetical protein	join(1930182..1930650,1930752..1930851,1930958..1931277,1931327..1931608,1931765..1932240)	Theileria orientalis strain Shintoku	20714993
TOT_020000879	CDS	TOT_020000879	NC_025261.1	1932672	1934932	D	hypothetical protein	join(1932672..1934424,1934670..1934932)	Theileria orientalis strain Shintoku	20714994
TOT_020000880	CDS	TOT_020000880	NC_025261.1	1935308	1935976	D	ATP11 family protein; uncharacterized protein	join(1935308..1935632,1935717..1935976)	Theileria orientalis strain Shintoku	20714995
TOT_020000882	CDS	TOT_020000882	NC_025261.1	1941059	1944349	D	conserved hypothetical protein	1941059..1944349	Theileria orientalis strain Shintoku	20714996
TOT_020001095	CDS	TOT_020001095	NC_025261.1	1944750	1945772	R	conserved hypothetical protein	complement(join(1944750..1945112,1945249..1945357,1945573..1945772))	Theileria orientalis strain Shintoku	20715186
TOT_020000884	CDS	TOT_020000884	NC_025261.1	1946131	1946393	D	hypothetical protein	join(1946131..1946227,1946320..1946393)	Theileria orientalis strain Shintoku	20714997
TOT_020000885	CDS	TOT_020000885	NC_025261.1	1946486	1947854	D	conserved hypothetical protein	join(1946486..1947482,1947550..1947854)	Theileria orientalis strain Shintoku	20714998
TOT_020000886	CDS	TOT_020000886	NC_025261.1	1947878	1948045	D	hypothetical protein	1947878..1948045	Theileria orientalis strain Shintoku	20714999
TOT_020000887	CDS	TOT_020000887	NC_025261.1	1948105	1952673	R	conserved hypothetical protein	complement(join(1948105..1949204,1949439..1950647,1950942..1951323,1951390..1952096,1952340..1952673))	Theileria orientalis strain Shintoku	20715000
TOT_020000888	CDS	TOT_020000888	NC_025261.1	1952703	1954336	R	adrenodoxin reductase family protein; uncharacterized protein	complement(join(1952703..1953289,1953335..1953941,1954118..1954336))	Theileria orientalis strain Shintoku	20715001
TOT_020000889	CDS	TOT_020000889	NC_025261.1	1954737	1959614	R	conserved hypothetical protein	complement(join(1954737..1955329,1955384..1955716,1955762..1959614))	Theileria orientalis strain Shintoku	20715002
TOT_020001096	CDS	TOT_020001096	NC_025261.1	1960328	1961026	D	ribosomal protein S14 family protein; uncharacterized protein	join(1960328..1960478,1960568..1960789,1960923..1961026)	Theileria orientalis strain Shintoku	20715187
TOT_020000891	CDS	TOT_020000891	NC_025261.1	1961320	1962864	R	general substrate transporter family protein; uncharacterized protein	complement(join(1961320..1962079,1962161..1962864))	Theileria orientalis strain Shintoku	20715003
TOT_020000892	CDS	TOT_020000892	NC_025261.1	1964097	1964871	R	hypothetical protein	complement(join(1964097..1964308,1964439..1964871))	Theileria orientalis strain Shintoku	20715004
TOT_020000893	CDS	TOT_020000893	NC_025261.1	1964935	1965434	R	hypothetical protein	complement(join(1964935..1965109,1965170..1965275,1965386..1965434))	Theileria orientalis strain Shintoku	20715005
TOT_020000894	CDS	TOT_020000894	NC_025261.1	1966172	1967991	R	HAD superfamily hydrolase-like, type 3 domain containing protein; uncharacterized protein	complement(join(1966172..1966851,1966947..1967402,1967634..1967991))	Theileria orientalis strain Shintoku	20715006
TOT_020000895	CDS	TOT_020000895	NC_025261.1	1968737	1969403	D	hypothetical protein	join(1968737..1968889,1969066..1969227,1969239..1969403)	Theileria orientalis strain Shintoku	20715007
TOT_020000896	CDS	TOT_020000896	NC_025261.1	1971395	1973766	R	protein phosphatase 2C homolog 2	complement(join(1971395..1972263,1972683..1972838,1972929..1973766))	Theileria orientalis strain Shintoku	20715008
TOT_020000897	CDS	TOT_020000897	NC_025261.1	1973934	1974329	D	hypothetical protein	join(1973934..1973947,1974170..1974329)	Theileria orientalis strain Shintoku	20715009
TOT_020000898	CDS	TOT_020000898	NC_025261.1	1975301	1976557	D	conserved hypothetical protein	join(1975301..1975500,1975585..1975867,1976168..1976557)	Theileria orientalis strain Shintoku	20715010
TOT_020000899	CDS	TOT_020000899	NC_025261.1	1977443	1979731	D	conserved hypothetical protein	join(1977443..1978690,1978781..1978923,1979059..1979731)	Theileria orientalis strain Shintoku	20715011
TOT_020000900	CDS	TOT_020000900	NC_025261.1	1980591	1983146	D	conserved hypothetical protein	join(1980591..1981349,1981419..1983146)	Theileria orientalis strain Shintoku	20715012
TOT_020000901	CDS	TOT_020000901	NC_025261.1	1983489	1985201	R	conserved hypothetical protein	complement(1983489..1985201)	Theileria orientalis strain Shintoku	20715013
TOT_020000902	CDS	TOT_020000902	NC_025261.1	1986171	1987553	R	serine/threonine protein phosphatase pp2a catalytic subunit	complement(join(1986171..1986261,1986295..1986440,1986494..1986677,1986721..1986841,1986905..1987015,1987046..1987159,1987325..1987553))	Theileria orientalis strain Shintoku	20715014
TOT_020000903	CDS	TOT_020000903	NC_025261.1	1988222	1988813	D	ubiquitin-related modifier 1 homolog	join(1988222..1988441,1988575..1988813)	Theileria orientalis strain Shintoku	20715015
TOT_020001097	CDS	TOT_020001097	NC_025261.1	1989126	1989848	D	conserved hypothetical protein	join(1989126..1989378,1989463..1989534,1989622..1989848)	Theileria orientalis strain Shintoku	20715188
TOT_020000905	CDS	TOT_020000905	NC_025261.1	1990096	1990803	R	conserved hypothetical protein	complement(1990096..1990803)	Theileria orientalis strain Shintoku	20715016
TOT_020001098	CDS	TOT_020001098	NC_025261.1	1991763	2003170	R	guanylyl cyclase	complement(join(1991763..1992050,1992360..1992454,1992598..1992934,1993068..1993302,1993704..1993814,1993893..1994068,1994117..1994265,1994469..1994686,1994969..1995144,1995349..1995770,1995857..1996026,1996158..1996620,1996830..1997020,1997081..1997480,1997632..1998123,1998269..1998817,1998860..1999308,1999417..1999643,1999728..2000397,2000695..2000937,2001199..2001414,2001565..2002015,2002174..2002863,2002945..2003170))	Theileria orientalis strain Shintoku	20715189
TOT_020000907	CDS	TOT_020000907	NC_025261.1	2003665	2005588	D	engulfment and cell motility, ELM domain containing protein; uncharacterized protein	join(2003665..2003746,2004205..2004374,2004462..2004662,2004735..2004946,2005016..2005229,2005335..2005498,2005540..2005588)	Theileria orientalis strain Shintoku	20715017
TOT_020001099	CDS	TOT_020001099	NC_025261.1	2005618	2006781	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(2005618..2006035,2006078..2006194,2006235..2006341,2006424..2006616,2006678..2006781))	Theileria orientalis strain Shintoku	20715190
TOT_020000909	CDS	TOT_020000909	NC_025261.1	2007363	2008443	D	conserved hypothetical protein	join(2007363..2007466,2007499..2007673,2007689..2007782,2007817..2007836,2008024..2008090,2008166..2008443)	Theileria orientalis strain Shintoku	20715018
TOT_020000910	CDS	TOT_020000910	NC_025261.1	2008500	2008767	R	predicted protein	complement(join(2008500..2008688,2008717..2008767))	Theileria orientalis strain Shintoku	20715019
TOT_020000911	CDS	TOT_020000911	NC_025261.1	2008851	2013178	R	conserved hypothetical protein	complement(join(2008851..2009498,2009856..2009936,2009967..2010038,2010328..2010475,2010687..2010942,2011071..2011201,2011232..2011304,2011810..2012125,2012224..2012350,2012468..2012727,2012897..2013178))	Theileria orientalis strain Shintoku	20715020
TOT_020000912	CDS	TOT_020000912	NC_025261.1	2013619	2015874	D	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	join(2013619..2014359,2014441..2015044,2015115..2015362,2015541..2015659,2015793..2015874)	Theileria orientalis strain Shintoku	20715021
TOT_020000913	CDS	TOT_020000913	NC_025261.1	2015896	2016045	R	hypothetical protein	complement(2015896..2016045)	Theileria orientalis strain Shintoku	20715022
TOT_020000914	CDS	TOT_020000914	NC_025261.1	2016386	2017024	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	2016386..2017024	Theileria orientalis strain Shintoku	20715023
TOT_020000915	CDS	TOT_020000915	NC_025261.1	2017436	2018407	D	conserved hypothetical protein	2017436..2018407	Theileria orientalis strain Shintoku	20715024
TOT_020000916	CDS	TOT_020000916	NC_025261.1	2019858	2021137	D	hypothetical protein	join(2019858..2021036,2021048..2021137)	Theileria orientalis strain Shintoku	20715025
TOT_020000917	CDS	TOT_020000917	NC_025261.1	2021322	2025769	D	conserved hypothetical protein	join(2021322..2022613,2022718..2025769)	Theileria orientalis strain Shintoku	20715026
TOT_020000918	CDS	TOT_020000918	NC_025261.1	2025931	2031516	R	conserved hypothetical protein	complement(join(2025931..2027327,2027451..2027715,2027776..2028259,2028308..2029703,2029797..2029964,2030016..2030880,2031001..2031516))	Theileria orientalis strain Shintoku	20715027
TOT_020000919	CDS	TOT_020000919	NC_025261.1	2032085	2035846	R	protein phosphatase 2C family protein; uncharacterized protein	complement(join(2032085..2032189,2032247..2032402,2032471..2032580,2032779..2032833,2032996..2033707,2033780..2033910,2034017..2034334,2034804..2035454,2035534..2035650,2035736..2035846))	Theileria orientalis strain Shintoku	20715028
TOT_020000920	CDS	TOT_020000920	NC_025261.1	2036369	2037605	D	26S proteasome ATPase subunit	join(2036369..2036861,2036926..2037605)	Theileria orientalis strain Shintoku	20715029
TOT_020000921	CDS	TOT_020000921	NC_025261.1	2038321	2039643	D	hypothetical protein	2038321..2039643	Theileria orientalis strain Shintoku	20715030
TOT_020001100	CDS	TOT_020001100	NC_025261.1	2040010	2045570	R	conserved hypothetical protein	complement(join(2040010..2041355,2041589..2041699,2041796..2042203,2042246..2042645,2042730..2042914,2043032..2043280,2043416..2043785,2043993..2044325,2044386..2045570))	Theileria orientalis strain Shintoku	20715191
TOT_020000923	CDS	TOT_020000923	NC_025261.1	2046264	2046407	R	hypothetical protein	complement(2046264..2046407)	Theileria orientalis strain Shintoku	20715031
TOT_020000924	CDS	TOT_020000924	NC_025261.1	2046674	2047948	D	conserved hypothetical protein	2046674..2047948	Theileria orientalis strain Shintoku	20715032
TOT_020000925	CDS	TOT_020000925	NC_025261.1	2048077	2052000	R	conserved hypothetical protein	complement(join(2048077..2048561,2049135..2049572,2049642..2050460,2050575..2051783,2051850..2051876,2051940..2052000))	Theileria orientalis strain Shintoku	20715033
TOT_020000926	CDS	TOT_020000926	NC_025261.1	2052697	2058912	D	conserved hypothetical protein	join(2052697..2054354,2054430..2054727,2054839..2054971,2055203..2055485,2055591..2056121,2056380..2057769,2058097..2058912)	Theileria orientalis strain Shintoku	20715034
TOT_020000927	CDS	TOT_020000927	NC_025261.1	2059356	2060094	D	peptidase S24, S26A and S26B, C-terminal domain containing protein; uncharacterized protein	join(2059356..2059649,2059747..2060094)	Theileria orientalis strain Shintoku	20715035
TOT_020000928	CDS	TOT_020000928	NC_025261.1	2060142	2061385	R	FKBP-type peptidyl-prolyl cis-trans isomerase	complement(join(2060142..2060180,2060190..2060294,2060387..2060938,2060949..2061124,2061193..2061266,2061309..2061385))	Theileria orientalis strain Shintoku	20715036
TOT_020001101	CDS	TOT_020001101	NC_025261.1	2061668	2064604	D	conserved hypothetical protein	join(2061668..2061983,2062015..2062049,2062092..2062533,2063353..2063582,2063628..2064002,2064332..2064604)	Theileria orientalis strain Shintoku	20715192
TOT_020001102	CDS	TOT_020001102	NC_025261.1	2065142	2066272	R	actin 1	complement(2065142..2066272)	Theileria orientalis strain Shintoku	20715193
TOT_020000931	CDS	TOT_020000931	NC_025261.1	2066649	2066759	D	hypothetical protein	2066649..2066759	Theileria orientalis strain Shintoku	20715037
TOT_020000932	CDS	TOT_020000932	NC_025261.1	2067979	2069541	D	conserved hypothetical protein	join(2067979..2068513,2068661..2068979,2069079..2069142,2069215..2069541)	Theileria orientalis strain Shintoku	20715038
TOT_020000933	CDS	TOT_020000933	NC_025261.1	2069762	2072573	R	mono-oxygenase	complement(join(2069762..2070087,2070113..2070255,2070285..2070366,2070502..2070592,2070625..2070638,2070669..2070798,2070838..2071002,2071041..2071150,2071183..2071381,2071415..2071576,2071614..2072200,2072229..2072366,2072402..2072573))	Theileria orientalis strain Shintoku	20715039
TOT_020000934	CDS	TOT_020000934	NC_025261.1	2072871	2075213	R	conserved hypothetical protein	complement(join(2072871..2073677,2073714..2075213))	Theileria orientalis strain Shintoku	20715040
TOT_020000935	CDS	TOT_020000935	NC_025261.1	2075814	2076697	R	conserved hypothetical protein	complement(join(2075814..2076455,2076488..2076697))	Theileria orientalis strain Shintoku	20715041
TOT_020000936	CDS	TOT_020000936	NC_025261.1	2077382	2078239	D	RNase P subunit p30 family protein; uncharacterized protein	2077382..2078239	Theileria orientalis strain Shintoku	20715042
TOT_020000937	CDS	TOT_020000937	NC_025261.1	2079069	2080257	D	heat shock protein DnaJ, N-terminal domain containing protein; uncharacterized protein	join(2079069..2079599,2079610..2080257)	Theileria orientalis strain Shintoku	20715043
TOT_020000938	CDS	TOT_020000938	NC_025261.1	2080522	2083420	R	5'-3' exonuclease	complement(join(2080522..2081541,2081855..2081983,2082095..2083420))	Theileria orientalis strain Shintoku	20715044
TOT_020000939	CDS	TOT_020000939	NC_025261.1	2083534	2084086	R	Ran binding protein	complement(join(2083534..2083665,2083723..2083795,2083826..2083880,2083917..2083981,2084046..2084086))	Theileria orientalis strain Shintoku	20715045
TOT_020000940	CDS	TOT_020000940	NC_025261.1	2085197	2090686	D	conserved hypothetical protein	join(2085197..2085708,2085725..2085800,2085825..2086352,2086504..2086723,2087205..2087330,2087426..2088251,2088375..2090486,2090602..2090686)	Theileria orientalis strain Shintoku	20715046
TOT_020000941	CDS	TOT_020000941	NC_025261.1	2090713	2092775	R	26S protease subunit	complement(join(2090713..2091361,2091422..2092713,2092752..2092775))	Theileria orientalis strain Shintoku	20715047
TOT_020000942	CDS	TOT_020000942	NC_025261.1	2093566	2094660	D	formate/nitrate transporter	join(2093566..2094456,2094559..2094660)	Theileria orientalis strain Shintoku	20715048
TOT_020000943	CDS	TOT_020000943	NC_025261.1	2095217	2100979	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(2095217..2100543,2100916..2100979)	Theileria orientalis strain Shintoku	20715049
TOT_020000944	CDS	TOT_020000944	NC_025261.1	2101105	2102210	D	protein of unknown function UPF0005 family protein; uncharacterized protein	join(2101105..2101356,2101387..2101730,2102027..2102210)	Theileria orientalis strain Shintoku	20715050
TOT_020000945	CDS	TOT_020000945	NC_025261.1	2102243	2102636	D	conserved hypothetical protein	join(2102243..2102433,2102439..2102511,2102517..2102636)	Theileria orientalis strain Shintoku	20715051
TOT_020000946	CDS	TOT_020000946	NC_025261.1	2102712	2103049	R	hypothetical protein	complement(join(2102712..2102785,2102956..2103049))	Theileria orientalis strain Shintoku	20715052
TOT_020000947	CDS	TOT_020000947	NC_025261.1	2103689	2104354	D	conserved hypothetical protein	2103689..2104354	Theileria orientalis strain Shintoku	20715053
TOT_020000948	CDS	TOT_020000948	NC_025261.1	2104446	2107226	D	tRNA pseudouridine synthase D family protein; uncharacterized protein	join(2104446..2105092,2105270..2106104,2106378..2107226)	Theileria orientalis strain Shintoku	20715054
TOT_020000949	CDS	TOT_020000949	NC_025261.1	2107497	2108102	D	Longin-like domain containing protein; uncharacterized protein	2107497..2108102	Theileria orientalis strain Shintoku	20715055
TOT_020000950	CDS	TOT_020000950	NC_025261.1	2108109	2111003	D	BRCT domain containing protein; uncharacterized protein	join(2108109..2109814,2109956..2110195,2110370..2110520,2110578..2111003)	Theileria orientalis strain Shintoku	20715056
TOT_020000951	CDS	TOT_020000951	NC_025261.1	2111518	2113377	R	phosphoglucosamine mutase	complement(2111518..2113377)	Theileria orientalis strain Shintoku	20715057
TOT_020000952	CDS	TOT_020000952	NC_025261.1	2113766	2115258	D	metalloprotease	join(2113766..2114152,2114241..2114471,2114504..2114626,2114659..2115258)	Theileria orientalis strain Shintoku	20715058
TOT_020001103	CDS	TOT_020001103	NC_025261.1	2115713	2116793	D	proteasome subunit alpha type 1	join(2115713..2115844,2115966..2116176,2116212..2116342,2116424..2116563,2116618..2116711,2116746..2116793)	Theileria orientalis strain Shintoku	20715194
TOT_020000954	CDS	TOT_020000954	NC_025261.1	2116898	2118416	D	metalloprotease	join(2116898..2117281,2117352..2117582,2117615..2117740,2117772..2118093,2118142..2118416)	Theileria orientalis strain Shintoku	20715059
TOT_020000955	CDS	TOT_020000955	NC_025261.1	2118893	2120402	D	conserved hypothetical protein	join(2118893..2119200,2119457..2119616,2119649..2119771,2119803..2120402)	Theileria orientalis strain Shintoku	20715060
TOT_020000956	CDS	TOT_020000956	NC_025261.1	2120857	2121906	D	proteasome subunit alpha type 1	join(2120857..2120988,2121110..2121320,2121356..2121486,2121568..2121707,2121762..2121906)	Theileria orientalis strain Shintoku	20715061
TOT_020000957	CDS	TOT_020000957	NC_025261.1	2122042	2123560	D	metalloprotease	join(2122042..2122425,2122496..2122726,2122759..2122884,2122916..2123237,2123286..2123560)	Theileria orientalis strain Shintoku	20715062
TOT_020000958	CDS	TOT_020000958	NC_025261.1	2123622	2125044	D	conserved hypothetical protein	join(2123622..2123712,2123744..2124356,2124388..2124574,2124606..2124913,2124972..2125044)	Theileria orientalis strain Shintoku	20715063
TOT_020000959	CDS	TOT_020000959	NC_025261.1	2125518	2125979	D	conserved hypothetical protein	2125518..2125979	Theileria orientalis strain Shintoku	20715064
TOT_020000960	CDS	TOT_020000960	NC_025261.1	2126031	2129399	R	conserved hypothetical protein	complement(join(2126031..2126300,2126396..2126979,2127079..2129250,2129291..2129399))	Theileria orientalis strain Shintoku	20715065
TOT_020001104	CDS	TOT_020001104	NC_025261.1	2130083	2130532	D	conserved hypothetical protein	join(2130083..2130398,2130441..2130532)	Theileria orientalis strain Shintoku	20715195
TOT_020001105	CDS	TOT_020001105	NC_025261.1	2130702	2133534	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(2130702..2130728,2130763..2130904,2131003..2132162,2132322..2132507,2132589..2132925,2133092..2133534)	Theileria orientalis strain Shintoku	20715196
TOT_020000963	CDS	TOT_020000963	NC_025261.1	2133844	2135691	R	calcium-binding EF-hand domain containing protein; uncharacterized protein	complement(join(2133844..2133974,2134125..2135691))	Theileria orientalis strain Shintoku	20715066
TOT_020000964	CDS	TOT_020000964	NC_025261.1	2136673	2139423	D	glucosamine--fructose-6-phosphate aminotransferase	join(2136673..2136755,2136916..2138719,2138950..2139423)	Theileria orientalis strain Shintoku	20715067
TOT_020000965	CDS	TOT_020000965	NC_025261.1	2139867	2140745	R	ATP12 ATPase family protein; uncharacterized protein	complement(2139867..2140745)	Theileria orientalis strain Shintoku	20715068
TOT_020000966	CDS	TOT_020000966	NC_025261.1	2141132	2142895	D	molecular chaperone protein	join(2141132..2142430,2142563..2142895)	Theileria orientalis strain Shintoku	20715069
TOT_020000967	CDS	TOT_020000967	NC_025261.1	2143711	2158969	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	join(2143711..2145784,2146095..2148534,2148755..2149209,2149297..2150888,2150943..2151094,2151128..2152014,2152292..2155930,2156079..2156673,2156809..2157103,2157338..2158969)	Theileria orientalis strain Shintoku	20715070
TOT_020000969	CDS	TOT_020000969	NC_025261.1	2159303	2160559	R	conserved hypothetical protein	complement(join(2159303..2160261,2160556..2160559))	Theileria orientalis strain Shintoku	20715071
TOT_020000970	CDS	TOT_020000970	NC_025261.1	2161232	2165770	D	ABC transporter related domain containing protein; uncharacterized protein	2161232..2165770	Theileria orientalis strain Shintoku	20715072
TOT_020001106	CDS	TOT_020001106	NC_025261.1	2166410	2169140	D	aldo-keto reductase	join(2166410..2167421,2167453..2167543,2167577..2167745,2167775..2167944,2167974..2168133,2168265..2168339,2168370..2168435,2168478..2168583,2168615..2168738,2168770..2168890,2169000..2169140)	Theileria orientalis strain Shintoku	20715197
TOT_020001107	CDS	TOT_020001107	NC_025261.1	2169178	2170627	R	conserved hypothetical protein	complement(join(2169178..2170127,2170213..2170627))	Theileria orientalis strain Shintoku	20715198
TOT_020000973	CDS	TOT_020000973	NC_025261.1	2171065	2173356	R	CTD-like phosphatase	complement(2171065..2173356)	Theileria orientalis strain Shintoku	20715073
TOT_020000974	CDS	TOT_020000974	NC_025261.1	2174083	2175912	R	serine/threonine protein phosphatase	complement(join(2174083..2174191,2174239..2174960,2174991..2175062,2175093..2175166,2175196..2175405,2175436..2175552,2175636..2175912))	Theileria orientalis strain Shintoku	20715074
TOT_020000975	CDS	TOT_020000975	NC_025261.1	2176198	2176311	R	hypothetical protein	complement(2176198..2176311)	Theileria orientalis strain Shintoku	20715075
TOT_020000976	CDS	TOT_020000976	NC_025261.1	2176531	2177479	D	thioredoxin-like fold domain containing protein; uncharacterized protein	join(2176531..2176581,2176680..2176796,2176833..2176940,2176976..2177073,2177118..2177239,2177327..2177391,2177423..2177479)	Theileria orientalis strain Shintoku	20715076
TOT_020001108	CDS	TOT_020001108	NC_025261.1	2177584	2178065	D	conserved hypothetical protein	join(2177584..2177743,2177812..2178065)	Theileria orientalis strain Shintoku	20715199
TOT_020000978	CDS	TOT_020000978	NC_025261.1	2178211	2179359	R	conserved hypothetical protein	complement(join(2178211..2178296,2178338..2178470,2178512..2178592,2178622..2178792,2178824..2178904,2178947..2179052,2179088..2179132,2179166..2179359))	Theileria orientalis strain Shintoku	20715077
TOT_020000979	CDS	TOT_020000979	NC_025261.1	2179915	2180633	D	40S ribosomal protein S8	join(2179915..2180125,2180246..2180398,2180431..2180633)	Theileria orientalis strain Shintoku	20715078
TOT_020000980	CDS	TOT_020000980	NC_025261.1	2181104	2183289	D	conserved hypothetical protein	join(2181104..2182395,2182533..2183289)	Theileria orientalis strain Shintoku	20715079
TOT_020000981	CDS	TOT_020000981	NC_025261.1	2184289	2186379	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	2184289..2186379	Theileria orientalis strain Shintoku	20715080
TOT_020000982	CDS	TOT_020000982	NC_025261.1	2186402	2186803	R	hypothetical protein	complement(join(2186402..2186639,2186664..2186803))	Theileria orientalis strain Shintoku	20715081
TOT_020000983	CDS	TOT_020000983	NC_025261.1	2188105	2189393	D	conserved hypothetical protein	join(2188105..2188270,2188301..2188355,2188408..2188489,2188623..2188658,2188739..2188830,2188946..2189039,2189156..2189263,2189331..2189393)	Theileria orientalis strain Shintoku	20715082
TOT_020001109	CDS	TOT_020001109	NC_025261.1	2189592	2190260	R	conserved hypothetical protein	complement(2189592..2190260)	Theileria orientalis strain Shintoku	20715200
TOT_020000985	CDS	TOT_020000985	NC_025261.1	2197028	2201596	D	ABC transporter	2197028..2201596	Theileria orientalis strain Shintoku	20715083
TOT_020000986	CDS	TOT_020000986	NC_025261.1	2201965	2208994	R	conserved hypothetical protein	complement(join(2201965..2203380,2205174..2205506,2206283..2208994))	Theileria orientalis strain Shintoku	20715084
TOT_020000987	CDS	TOT_020000987	NC_025261.1	2210291	2210536	D	hypothetical protein	2210291..2210536	Theileria orientalis strain Shintoku	20715085
TOT_020000988	CDS	TOT_020000988	NC_025261.1	2210538	2212853	R	conserved hypothetical protein	complement(2210538..2212853)	Theileria orientalis strain Shintoku	20715086
TOT_020000989	CDS	TOT_020000989	NC_025261.1	2212895	2213062	D	hypothetical protein	2212895..2213062	Theileria orientalis strain Shintoku	20715087
TOT_020000990	CDS	TOT_020000990	NC_025261.1	2213266	2214212	R	hypothetical protein	complement(join(2213266..2213491,2213763..2213976,2214137..2214212))	Theileria orientalis strain Shintoku	20715088
TOT_020000991	CDS	TOT_020000991	NC_025261.1	2214525	2215261	R	hypothetical protein	complement(join(2214525..2214575,2214636..2214946,2215225..2215261))	Theileria orientalis strain Shintoku	20715089
TOT_020000992	CDS	TOT_020000992	NC_025261.1	2215299	2216619	D	hypothetical protein	join(2215299..2215373,2215516..2215626,2215645..2215959,2216107..2216619)	Theileria orientalis strain Shintoku	20715090
TOT_020000993	CDS	TOT_020000993	NC_025261.1	2216632	2216757	D	hypothetical protein	2216632..2216757	Theileria orientalis strain Shintoku	20715091
TOT_030000001	CDS	TOT_030000001	NC_025262.1	445	630	R	hypothetical protein	complement(445..630)	Theileria orientalis strain Shintoku	20715213
TOT_030000002	CDS	TOT_030000002	NC_025262.1	637	1890	R	hypothetical protein	complement(join(637..703,752..1062,1210..1524,1543..1653,1816..1890))	Theileria orientalis strain Shintoku	20715214
TOT_030000003	CDS	TOT_030000003	NC_025262.1	1910	2594	R	conserved hypothetical protein	complement(join(1910..2077,2231..2379,2456..2594))	Theileria orientalis strain Shintoku	20715215
TOT_030000004	CDS	TOT_030000004	NC_025262.1	3050	3208	D	hypothetical protein	3050..3208	Theileria orientalis strain Shintoku	20715216
TOT_030000005	CDS	TOT_030000005	NC_025262.1	3288	3491	D	hypothetical protein	3288..3491	Theileria orientalis strain Shintoku	20715217
TOT_030000006	CDS	TOT_030000006	NC_025262.1	3763	3936	D	hypothetical protein	3763..3936	Theileria orientalis strain Shintoku	20715218
TOT_030000007	CDS	TOT_030000007	NC_025262.1	4216	4416	R	hypothetical protein	complement(4216..4416)	Theileria orientalis strain Shintoku	20715219
TOT_030000008	CDS	TOT_030000008	NC_025262.1	4425	6959	D	conserved hypothetical protein	4425..6959	Theileria orientalis strain Shintoku	20715220
TOT_030000889	CDS	TOT_030000889	NC_025262.1	8498	17947	D	conserved hypothetical protein	join(8498..9156,14575..17947)	Theileria orientalis strain Shintoku	20716026
TOT_030000010	CDS	TOT_030000010	NC_025262.1	17974	18865	R	hypothetical protein	complement(join(17974..18149,18237..18453,18860..18865))	Theileria orientalis strain Shintoku	20715221
TOT_030000011	CDS	TOT_030000011	NC_025262.1	18868	23424	R	ABC transporter related domain containing protein; uncharacterized protein	complement(18868..23424)	Theileria orientalis strain Shintoku	20715222
TOT_030000012	CDS	TOT_030000012	NC_025262.1	25663	30948	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(25663..29643,29659..30948))	Theileria orientalis strain Shintoku	20715223
TOT_030000013	CDS	TOT_030000013	NC_025262.1	32269	37553	R	conserved hypothetical protein	complement(join(32269..37171,37459..37553))	Theileria orientalis strain Shintoku	20715224
TOT_030000014	CDS	TOT_030000014	NC_025262.1	38088	41036	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(38088..41036)	Theileria orientalis strain Shintoku	20715225
TOT_030000015	CDS	TOT_030000015	NC_025262.1	41347	46678	R	conserved hypothetical protein	complement(join(41347..41424,41451..41591,42371..46678))	Theileria orientalis strain Shintoku	20715226
TOT_030000016	CDS	TOT_030000016	NC_025262.1	47553	50269	R	ubiquitin interacting motif domain containing protein; uncharacterized protein	complement(join(47553..50022,50137..50164,50176..50269))	Theileria orientalis strain Shintoku	20715227
TOT_030000017	CDS	TOT_030000017	NC_025262.1	50340	55084	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(50340..50428,50483..50603,50614..50742,50780..50899,51059..55084))	Theileria orientalis strain Shintoku	20715228
TOT_030000890	CDS	TOT_030000890	NC_025262.1	56880	61532	D	conserved hypothetical protein	56880..61532	Theileria orientalis strain Shintoku	20716027
TOT_030000019	CDS	TOT_030000019	NC_025262.1	61758	61916	R	hypothetical protein	complement(61758..61916)	Theileria orientalis strain Shintoku	20715229
TOT_030000020	CDS	TOT_030000020	NC_025262.1	61984	65886	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	61984..65886	Theileria orientalis strain Shintoku	20715230
TOT_030000021	CDS	TOT_030000021	NC_025262.1	66295	67112	R	40S ribosomal protein S5	complement(join(66295..66433,66465..66698,66814..66950,67041..67112))	Theileria orientalis strain Shintoku	20715231
TOT_030000891	CDS	TOT_030000891	NC_025262.1	67848	68601	D	ADP-ribosylation factor	join(67848..67947,67986..68095,68221..68601)	Theileria orientalis strain Shintoku	20716028
TOT_030000892	CDS	TOT_030000892	NC_025262.1	68782	69834	D	conserved hypothetical protein	join(68782..68817,68859..68936,68965..69147,69201..69240,69270..69325,69357..69462,69518..69686,69753..69834)	Theileria orientalis strain Shintoku	20716029
TOT_030000893	CDS	TOT_030000893	NC_025262.1	69998	70594	D	multiprotein bridging factor type 1	join(69998..70121,70162..70207,70293..70461,70496..70594)	Theileria orientalis strain Shintoku	20716030
TOT_030000025	CDS	TOT_030000025	NC_025262.1	70751	72143	R	farnesyl pyrophosphate synthetase	complement(join(70751..70945,70984..71082,71133..71218,71248..71465,71523..71594,71701..71806,71828..71926,71975..72143))	Theileria orientalis strain Shintoku	20715232
TOT_030000026	CDS	TOT_030000026	NC_025262.1	72983	74560	D	conserved hypothetical protein	72983..74560	Theileria orientalis strain Shintoku	20715233
TOT_030000027	CDS	TOT_030000027	NC_025262.1	74830	75381	D	conserved hypothetical protein	join(74830..75106,75185..75381)	Theileria orientalis strain Shintoku	20715234
TOT_030000028	CDS	TOT_030000028	NC_025262.1	75585	76294	D	uncharacterised trophozoite protein	join(75585..75672,75730..75821,75867..76024,76063..76294)	Theileria orientalis strain Shintoku	20715235
TOT_030000029	CDS	TOT_030000029	NC_025262.1	76359	77097	R	vacuolar ATP synthase subunit E	complement(join(76359..77033,77095..77097))	Theileria orientalis strain Shintoku	20715236
TOT_030000030	CDS	TOT_030000030	NC_025262.1	77267	78979	D	SecY protein family protein; uncharacterized protein	join(77267..77279,77404..77471,77508..77787,77881..78769,78799..78979)	Theileria orientalis strain Shintoku	20715237
TOT_030000894	CDS	TOT_030000894	NC_025262.1	79005	79689	R	multicopy suppressor of ts gsp1	complement(join(79005..79150,79168..79283,79313..79399,79429..79581,79616..79689))	Theileria orientalis strain Shintoku	20716031
TOT_030000032	CDS	TOT_030000032	NC_025262.1	79994	80825	D	kinetochore-Ndc80 subunit Spc25 family protein; uncharacterized protein	join(79994..80141,80171..80236,80254..80421,80452..80550,80581..80676,80707..80825)	Theileria orientalis strain Shintoku	20715238
TOT_030000033	CDS	TOT_030000033	NC_025262.1	81486	83285	D	conserved hypothetical protein	join(81486..82553,82713..83285)	Theileria orientalis strain Shintoku	20715239
TOT_030000034	CDS	TOT_030000034	NC_025262.1	83673	86198	D	conserved hypothetical protein	83673..86198	Theileria orientalis strain Shintoku	20715240
TOT_030000035	CDS	TOT_030000035	NC_025262.1	86614	88200	R	conserved hypothetical protein	complement(86614..88200)	Theileria orientalis strain Shintoku	20715241
TOT_030000036	CDS	TOT_030000036	NC_025262.1	88768	93858	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(88768..93858)	Theileria orientalis strain Shintoku	20715242
TOT_030000037	CDS	TOT_030000037	NC_025262.1	94306	95441	R	Mrp family protein; uncharacterized protein	complement(join(94306..94315,94407..94775,94845..95032,95067..95441))	Theileria orientalis strain Shintoku	20715243
TOT_030000038	CDS	TOT_030000038	NC_025262.1	98056	99460	R	GPI anchor transamidase	complement(join(98056..98756,98787..98987,99022..99460))	Theileria orientalis strain Shintoku	20715244
TOT_030000039	CDS	TOT_030000039	NC_025262.1	100048	100550	R	conserved hypothetical protein	complement(join(100048..100259,100336..100423,100512..100550))	Theileria orientalis strain Shintoku	20715245
TOT_030000040	CDS	TOT_030000040	NC_025262.1	100630	101742	R	nuclear transcription factor Y subunit B-8	complement(join(100630..100800,100992..101121,101173..101425,101532..101742))	Theileria orientalis strain Shintoku	20715246
TOT_030000041	CDS	TOT_030000041	NC_025262.1	102637	103168	D	hypothetical protein	join(102637..102717,102753..102811,102893..102916,102950..103021,103054..103168)	Theileria orientalis strain Shintoku	20715247
TOT_030000042	CDS	TOT_030000042	NC_025262.1	103463	104301	D	serine/threonine protein kinase	join(103463..103615,103652..103713,103783..103899,103942..104065,104160..104241,104279..104301)	Theileria orientalis strain Shintoku	20715248
TOT_030000043	CDS	TOT_030000043	NC_025262.1	104542	106138	D	protein kinase, core domain containing protein; uncharacterized protein	join(104542..104634,104732..104851,104958..105109,105148..106138)	Theileria orientalis strain Shintoku	20715249
TOT_030000044	CDS	TOT_030000044	NC_025262.1	106130	106302	R	ribosomal protein L41 family protein; uncharacterized protein	complement(join(106130..106195,106249..106302))	Theileria orientalis strain Shintoku	20715250
TOT_030000045	CDS	TOT_030000045	NC_025262.1	107042	108200	D	molybdenum cofactor biosynthesis domain containing protein; uncharacterized protein	join(107042..107214,107254..107330,107372..107463,107510..107686,107958..108200)	Theileria orientalis strain Shintoku	20715251
TOT_030000046	CDS	TOT_030000046	NC_025262.1	108609	110280	D	conserved hypothetical protein	join(108609..108613,108792..109325,109356..109455,109520..110095,110149..110280)	Theileria orientalis strain Shintoku	20715252
TOT_030000047	CDS	TOT_030000047	NC_025262.1	110587	111384	D	conserved hypothetical protein	110587..111384	Theileria orientalis strain Shintoku	20715253
TOT_030000048	CDS	TOT_030000048	NC_025262.1	111393	115208	R	integral membrane protein	complement(join(111393..111902,111945..112382,112493..112552,112587..112912,112965..113222,113254..113530,113561..113797,113828..114144,114210..114500,114531..114758,114790..114900,114935..115208))	Theileria orientalis strain Shintoku	20715254
TOT_030000049	CDS	TOT_030000049	NC_025262.1	115629	116927	D	cytochrome c oxidase copper chaperone, Dopuin	join(115629..115850,115924..116432,116528..116927)	Theileria orientalis strain Shintoku	20715255
TOT_030000050	CDS	TOT_030000050	NC_025262.1	117229	119304	R	conserved hypothetical protein	complement(117229..119304)	Theileria orientalis strain Shintoku	20715256
TOT_030000051	CDS	TOT_030000051	NC_025262.1	120354	120713	R	conserved hypothetical protein	complement(join(120354..120369,120462..120539,120610..120713))	Theileria orientalis strain Shintoku	20715257
TOT_030000052	CDS	TOT_030000052	NC_025262.1	120971	121510	R	conserved hypothetical protein	complement(join(120971..121094,121377..121510))	Theileria orientalis strain Shintoku	20715258
TOT_030000053	CDS	TOT_030000053	NC_025262.1	121539	122210	D	Streptomyces cyclase/dehydrase family protein; uncharacterized protein	join(121539..121697,121762..121899,121980..122210)	Theileria orientalis strain Shintoku	20715259
TOT_030000054	CDS	TOT_030000054	NC_025262.1	122604	124662	D	DEAD-box RNA helicase	join(122604..123018,123052..123369,123429..124314,124494..124662)	Theileria orientalis strain Shintoku	20715260
TOT_030000055	CDS	TOT_030000055	NC_025262.1	124973	128273	R	transcription factor	complement(join(124973..127254,127286..127595,127638..127761,127881..127993,128091..128273))	Theileria orientalis strain Shintoku	20715261
TOT_030000056	CDS	TOT_030000056	NC_025262.1	128544	130781	R	conserved hypothetical protein	complement(128544..130781)	Theileria orientalis strain Shintoku	20715262
TOT_030000057	CDS	TOT_030000057	NC_025262.1	131755	133913	D	NLI interacting factor domain containing protein; uncharacterized protein	join(131755..131775,131880..132545,132630..133913)	Theileria orientalis strain Shintoku	20715263
TOT_030000058	CDS	TOT_030000058	NC_025262.1	134132	136505	R	conserved hypothetical protein	complement(join(134132..134547,134633..134990,135098..135650,135735..136336,136452..136505))	Theileria orientalis strain Shintoku	20715264
TOT_030000059	CDS	TOT_030000059	NC_025262.1	136926	137925	R	histone deacetylase complex subunit Sap18-like protein	complement(join(136926..137224,137268..137925))	Theileria orientalis strain Shintoku	20715265
TOT_030000060	CDS	TOT_030000060	NC_025262.1	138360	140558	D	conserved hypothetical protein	join(138360..138438,138659..138909,138940..139020,139072..139415,139516..139666,139728..139846,140027..140094,140126..140173,140231..140303,140420..140558)	Theileria orientalis strain Shintoku	20715266
TOT_030000061	CDS	TOT_030000061	NC_025262.1	140666	142079	R	Tgf beta-inducible nuclear protein 1	complement(join(140666..140799,141059..141201,141315..141393,141426..141483,141514..141582,141617..141722,141798..141917,142009..142079))	Theileria orientalis strain Shintoku	20715267
TOT_030000062	CDS	TOT_030000062	NC_025262.1	142236	144421	R	protein of unknown function DUF1754, eukaryotic family protein; uncharacterized protein	complement(join(142236..142827,142861..143105,143179..143267,143328..143453,143553..143619,143656..143693,143928..144077,144142..144421))	Theileria orientalis strain Shintoku	20715268
TOT_030000063	CDS	TOT_030000063	NC_025262.1	144861	146279	D	conserved hypothetical protein	join(144861..145151,145380..145679,145755..146279)	Theileria orientalis strain Shintoku	20715269
TOT_030000064	CDS	TOT_030000064	NC_025262.1	146532	149123	D	elongation factor g 1, mitochondrial	join(146532..147989,148063..148452,148517..148921,149019..149123)	Theileria orientalis strain Shintoku	20715270
TOT_030000065	CDS	TOT_030000065	NC_025262.1	149287	153027	D	conserved hypothetical protein	join(149287..149407,149462..149601,149663..149776,149812..149873,149906..149961,150013..150116,150174..150369,150494..150531,150613..150716,150770..150857,150898..150973,151014..151100,151152..151241,151283..151326,151404..151487,151551..151625,151658..151714,151971..152042,152150..152350,152507..152599,152664..152747,152815..153027)	Theileria orientalis strain Shintoku	20715271
TOT_030000066	CDS	TOT_030000066	NC_025262.1	153069	153422	R	hypothetical protein	complement(join(153069..153110,153153..153422))	Theileria orientalis strain Shintoku	20715272
TOT_030000067	CDS	TOT_030000067	NC_025262.1	154206	156254	R	conserved hypothetical protein	complement(154206..156254)	Theileria orientalis strain Shintoku	20715273
TOT_030000068	CDS	TOT_030000068	NC_025262.1	156633	157812	D	membrane attack complex component/perforin/complement C9 family protein; uncharacterized protein	join(156633..156765,156796..156989,157020..157222,157254..157435,157466..157812)	Theileria orientalis strain Shintoku	20715274
TOT_030000069	CDS	TOT_030000069	NC_025262.1	158009	158922	D	proteasome subunit alpha type 2	join(158009..158120,158228..158397,158464..158597,158628..158922)	Theileria orientalis strain Shintoku	20715275
TOT_030000070	CDS	TOT_030000070	NC_025262.1	159089	161114	D	bacterial surface antigen (D15) family protein; uncharacterized protein	join(159089..159179,159217..159305,159365..159517,159583..159675,159713..159877,159916..159974,160079..160193,160258..160341,160440..160596,160939..161114)	Theileria orientalis strain Shintoku	20715276
TOT_030000895	CDS	TOT_030000895	NC_025262.1	161180	161446	R	conserved hypothetical protein	complement(161180..161446)	Theileria orientalis strain Shintoku	20716032
TOT_030000072	CDS	TOT_030000072	NC_025262.1	161568	163653	D	Plasmodium falciparum CPW-WPC repeat containing protein	join(161568..161680,161715..161793,161878..161944,162065..162168,162201..162338,162560..162589,162625..162754,162796..162879,162913..163185,163281..163496,163532..163653)	Theileria orientalis strain Shintoku	20715277
TOT_030000073	CDS	TOT_030000073	NC_025262.1	163747	164370	R	signal peptidase	complement(join(163747..164147,164220..164370))	Theileria orientalis strain Shintoku	20715278
TOT_030000074	CDS	TOT_030000074	NC_025262.1	164583	165359	R	conserved hypothetical protein	complement(164583..165359)	Theileria orientalis strain Shintoku	20715279
TOT_030000075	CDS	TOT_030000075	NC_025262.1	165418	166858	R	4-hydroxybenzoate octaprenyltransferase	complement(join(165418..165624,165710..165797,165840..165994,166026..166140,166173..166239,166324..166858))	Theileria orientalis strain Shintoku	20715280
TOT_030000076	CDS	TOT_030000076	NC_025262.1	166917	171915	R	membrane attack complex component/perforin/complement C9 family protein; uncharacterized protein	complement(join(166917..166939,166970..167335,167370..167554,167588..167799,167857..168056,168088..168132,168163..168251,168448..168565,168597..168672,168729..168814,168860..168947,168980..169103,169135..169286,169349..169770,169806..170220,170305..170435,170465..170517,170758..171091,171123..171277,171337..171533,171608..171807,171909..171915))	Theileria orientalis strain Shintoku	20715281
TOT_030000077	CDS	TOT_030000077	NC_025262.1	173361	174323	D	conserved hypothetical protein	173361..174323	Theileria orientalis strain Shintoku	20715282
TOT_030000896	CDS	TOT_030000896	NC_025262.1	175831	177292	R	GTP-binding protein Obg/CgtA family protein; uncharacterized protein	complement(join(175831..176006,176060..176215,176247..176328,176362..176439,176495..176543,176576..176634,176716..176871,176908..177111,177203..177292))	Theileria orientalis strain Shintoku	20716033
TOT_030000079	CDS	TOT_030000079	NC_025262.1	177477	180135	D	conserved hypothetical protein	join(177477..178144,178205..178593,178625..180135)	Theileria orientalis strain Shintoku	20715283
TOT_030000897	CDS	TOT_030000897	NC_025262.1	180374	181193	D	CMP/dCMP deaminase, zinc-binding domain containing protein; uncharacterized protein	join(180374..180430,180461..180571,180608..180776,180897..180972,181031..181193)	Theileria orientalis strain Shintoku	20716034
TOT_030000898	CDS	TOT_030000898	NC_025262.1	181274	182062	R	conserved hypothetical protein	complement(join(181274..181440,181471..181528,181561..181644,181675..181818,181879..181943,181975..182062))	Theileria orientalis strain Shintoku	20716035
TOT_030000082	CDS	TOT_030000082	NC_025262.1	182132	182996	D	Snf7 family protein; uncharacterized protein	join(182132..182216,182323..182525,182631..182996)	Theileria orientalis strain Shintoku	20715284
TOT_030000083	CDS	TOT_030000083	NC_025262.1	183280	188648	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(183280..183382,183422..184492,184529..184549,184580..184744,184967..186852,186961..188520,188556..188648))	Theileria orientalis strain Shintoku	20715285
TOT_030000084	CDS	TOT_030000084	NC_025262.1	188884	191730	D	ribonuclease P/MRP, POP1 domain containing protein; uncharacterized protein	join(188884..189156,189228..189726,189766..189866,189898..190334,190398..190517,190618..190755,190841..191049,191081..191730)	Theileria orientalis strain Shintoku	20715286
TOT_030000085	CDS	TOT_030000085	NC_025262.1	192034	194781	D	histone deacetylase superfamily protein; uncharacterized protein	join(192034..192629,192717..193989,194128..194781)	Theileria orientalis strain Shintoku	20715287
TOT_030000086	CDS	TOT_030000086	NC_025262.1	194956	200764	D	eukaryotic translation initiation factor 3 subunit 7	join(194956..195129,195199..195410,195562..196954,197267..198531,198598..200764)	Theileria orientalis strain Shintoku	20715288
TOT_030000087	CDS	TOT_030000087	NC_025262.1	201144	207488	R	conserved hypothetical protein	complement(join(201144..202626,202816..204472,204551..206295,206386..207488))	Theileria orientalis strain Shintoku	20715289
TOT_030000088	CDS	TOT_030000088	NC_025262.1	208123	209396	R	conserved hypothetical protein	complement(join(208123..209019,209049..209132,209184..209278,209309..209396))	Theileria orientalis strain Shintoku	20715290
TOT_030000089	CDS	TOT_030000089	NC_025262.1	210447	211676	R	conserved hypothetical protein	complement(join(210447..210627,210659..210934,210966..211018,211142..211342,211374..211468,211499..211676))	Theileria orientalis strain Shintoku	20715291
TOT_030000090	CDS	TOT_030000090	NC_025262.1	211886	212962	R	conserved hypothetical protein	complement(join(211886..211948,211981..212246,212286..212532,212595..212774,212876..212962))	Theileria orientalis strain Shintoku	20715292
TOT_030000091	CDS	TOT_030000091	NC_025262.1	213336	213800	R	conserved hypothetical protein	complement(join(213336..213389,213430..213481,213532..213605,213639..213800))	Theileria orientalis strain Shintoku	20715293
TOT_030000092	CDS	TOT_030000092	NC_025262.1	214203	215084	D	conserved hypothetical protein	214203..215084	Theileria orientalis strain Shintoku	20715294
TOT_030000899	CDS	TOT_030000899	NC_025262.1	215737	216245	D	conserved hypothetical protein	join(215737..215767,215798..215860,215890..216032,216062..216116,216181..216245)	Theileria orientalis strain Shintoku	20716036
TOT_030000094	CDS	TOT_030000094	NC_025262.1	216878	217497	R	conserved hypothetical protein	complement(join(216878..216927,217040..217140,217157..217497))	Theileria orientalis strain Shintoku	20715295
TOT_030000095	CDS	TOT_030000095	NC_025262.1	217642	218878	R	cystathionine beta-synthase, core domain containing protein; uncharacterized protein	complement(join(217642..217725,217853..217936,217964..218031,218061..218112,218143..218329,218362..218443,218473..218601,218634..218694,218726..218878))	Theileria orientalis strain Shintoku	20715296
TOT_030000096	CDS	TOT_030000096	NC_025262.1	219054	219949	D	Ras-related protein Rab-1	join(219054..219137,219178..219273,219313..219455,219522..219678,219767..219949)	Theileria orientalis strain Shintoku	20715297
TOT_030000097	CDS	TOT_030000097	NC_025262.1	220186	221170	D	ribosomal protein S9	join(220186..220338,220369..220557,220660..220761,220793..220848,220888..221170)	Theileria orientalis strain Shintoku	20715298
TOT_030000900	CDS	TOT_030000900	NC_025262.1	221485	223151	R	adenylosuccinate lyase	complement(join(221485..221680,221710..222096,222374..222516,222616..222798,222828..222901,222965..223151))	Theileria orientalis strain Shintoku	20716037
TOT_030000901	CDS	TOT_030000901	NC_025262.1	223346	225642	R	conserved hypothetical protein	complement(join(223346..223568,223601..223840,223874..223899,223933..223981,224015..224121,224152..224362,224462..224838,225031..225178,225211..225276,225311..225506,225537..225642))	Theileria orientalis strain Shintoku	20716038
TOT_030000100	CDS	TOT_030000100	NC_025262.1	225892	227352	D	abortive infection protein family protein; uncharacterized protein	225892..227352	Theileria orientalis strain Shintoku	20715299
TOT_030000101	CDS	TOT_030000101	NC_025262.1	227618	227965	R	conserved hypothetical protein	complement(join(227618..227832,227864..227920,227953..227965))	Theileria orientalis strain Shintoku	20715300
TOT_030000102	CDS	TOT_030000102	NC_025262.1	228137	229551	D	conserved hypothetical protein	join(228137..228265,228306..228419,228459..228527,228669..228827,228857..229029,229061..229186,229305..229551)	Theileria orientalis strain Shintoku	20715301
TOT_030000103	CDS	TOT_030000103	NC_025262.1	229826	230311	R	hypothetical protein	complement(join(229826..230212,230258..230311))	Theileria orientalis strain Shintoku	20715302
TOT_030000104	CDS	TOT_030000104	NC_025262.1	230317	230735	D	hypothetical protein	join(230317..230511,230517..230735)	Theileria orientalis strain Shintoku	20715303
TOT_030000105	CDS	TOT_030000105	NC_025262.1	232632	235520	R	hypothetical protein	complement(join(232632..232754,232763..232952,233590..233751,233854..234036,234286..234342,234427..234548,234565..234735,235234..235392,235494..235520))	Theileria orientalis strain Shintoku	20715304
TOT_030000106	CDS	TOT_030000106	NC_025262.1	239056	239925	D	nucleoside diphosphate hydrolase	join(239056..239160,239276..239419,239478..239615,239716..239925)	Theileria orientalis strain Shintoku	20715305
TOT_030000107	CDS	TOT_030000107	NC_025262.1	240079	241237	R	zinc transport protein	complement(join(240079..240488,240569..240838,240868..241038,241069..241237))	Theileria orientalis strain Shintoku	20715306
TOT_030000108	CDS	TOT_030000108	NC_025262.1	241913	242845	D	conserved hypothetical protein	join(241913..242085,242117..242200,242229..242311,242341..242456,242490..242558,242605..242700,242738..242845)	Theileria orientalis strain Shintoku	20715307
TOT_030000109	CDS	TOT_030000109	NC_025262.1	243277	250452	D	conserved hypothetical protein	243277..250452	Theileria orientalis strain Shintoku	20715308
TOT_030000110	CDS	TOT_030000110	NC_025262.1	250544	251982	D	conserved hypothetical protein	join(250544..251680,251755..251853,251875..251982)	Theileria orientalis strain Shintoku	20715309
TOT_030000111	CDS	TOT_030000111	NC_025262.1	252107	253057	R	conserved hypothetical protein	complement(join(252107..252327,252358..252601,252631..252711,252745..253014,253055..253057))	Theileria orientalis strain Shintoku	20715310
TOT_030000112	CDS	TOT_030000112	NC_025262.1	253481	255768	D	conserved hypothetical protein	join(253481..254998,255113..255247,255289..255768)	Theileria orientalis strain Shintoku	20715311
TOT_030000113	CDS	TOT_030000113	NC_025262.1	255922	257581	R	FAD dependent oxidoreductase family protein; uncharacterized protein	complement(join(255922..256875,256906..257029,257087..257189,257224..257313,257361..257504,257536..257581))	Theileria orientalis strain Shintoku	20715312
TOT_030000114	CDS	TOT_030000114	NC_025262.1	258946	259459	R	Longin-like domain containing protein; uncharacterized protein	complement(join(258946..259106,259185..259259,259357..259459))	Theileria orientalis strain Shintoku	20715313
TOT_030000115	CDS	TOT_030000115	NC_025262.1	259688	260389	R	60S ribosomal protein L15	complement(join(259688..260288,260376..260389))	Theileria orientalis strain Shintoku	20715314
TOT_030000116	CDS	TOT_030000116	NC_025262.1	260794	263346	D	conserved hypothetical protein	join(260794..262839,262963..263134,263201..263346)	Theileria orientalis strain Shintoku	20715315
TOT_030000117	CDS	TOT_030000117	NC_025262.1	263624	264859	R	possible rhomboid family protein; uncharacterized protein	complement(263624..264859)	Theileria orientalis strain Shintoku	20715316
TOT_030000118	CDS	TOT_030000118	NC_025262.1	265702	272951	D	zinc finger, PHD-type domain containing protein; uncharacterized protein	join(265702..265720,265805..267853,267923..270409,270890..271784,271898..272951)	Theileria orientalis strain Shintoku	20715317
TOT_030000119	CDS	TOT_030000119	NC_025262.1	273431	274855	D	conserved hypothetical protein	273431..274855	Theileria orientalis strain Shintoku	20715318
TOT_030000120	CDS	TOT_030000120	NC_025262.1	275056	282428	R	U5 small nuclear ribonucleoprotein-specific helicase	complement(join(275056..275304,275380..275588,275779..276016,276264..282020,282080..282280,282384..282428))	Theileria orientalis strain Shintoku	20715319
TOT_030000121	CDS	TOT_030000121	NC_025262.1	282600	282746	D	hypothetical protein	282600..282746	Theileria orientalis strain Shintoku	20715320
TOT_030000885	CDS	TOT_030000885	NC_025262.1	282930	286848	D	DNA-directed RNA polymerase III	join(282930..283420,283541..284535,284571..285104,285169..286392,286430..286848)	Theileria orientalis strain Shintoku	20716024
TOT_030000122	CDS	TOT_030000122	NC_025262.1	287253	288109	D	40S ribosomal protein S23	join(287253..287262,287400..287578,287861..288109)	Theileria orientalis strain Shintoku	20715321
TOT_030000123	CDS	TOT_030000123	NC_025262.1	288675	289736	D	60S ribosomal protein L7	join(288675..288680,288745..289228,289313..289543,289681..289736)	Theileria orientalis strain Shintoku	20715322
TOT_030000124	CDS	TOT_030000124	NC_025262.1	289879	290868	D	calponin-like actin-binding domain containing protein; uncharacterized protein	289879..290868	Theileria orientalis strain Shintoku	20715323
TOT_030000125	CDS	TOT_030000125	NC_025262.1	291030	291926	R	conserved hypothetical protein	complement(join(291030..291249,291280..291653,291720..291832,291878..291926))	Theileria orientalis strain Shintoku	20715324
TOT_030000126	CDS	TOT_030000126	NC_025262.1	292448	294309	D	conserved hypothetical protein	join(292448..293538,293570..294111,294143..294309)	Theileria orientalis strain Shintoku	20715325
TOT_030000902	CDS	TOT_030000902	NC_025262.1	294355	294672	R	hypothetical protein	complement(294355..294672)	Theileria orientalis strain Shintoku	20716039
TOT_030000128	CDS	TOT_030000128	NC_025262.1	294884	296371	R	conserved hypothetical protein	complement(294884..296371)	Theileria orientalis strain Shintoku	20715326
TOT_030000129	CDS	TOT_030000129	NC_025262.1	296949	299505	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(296949..297122,297344..297496,297532..299505))	Theileria orientalis strain Shintoku	20715327
TOT_030000130	CDS	TOT_030000130	NC_025262.1	299658	299768	R	hypothetical protein	complement(299658..299768)	Theileria orientalis strain Shintoku	20715328
TOT_030000131	CDS	TOT_030000131	NC_025262.1	299964	302804	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(299964..301087,301178..302804))	Theileria orientalis strain Shintoku	20715329
TOT_030000132	CDS	TOT_030000132	NC_025262.1	303044	303363	R	zinc finger, Tim10/DDP-type family protein; uncharacterized protein	complement(join(303044..303256,303310..303363))	Theileria orientalis strain Shintoku	20715330
TOT_030000133	CDS	TOT_030000133	NC_025262.1	303470	304117	R	light induced protein like protein	complement(join(303470..303552,303660..303734,303774..303896,304015..304117))	Theileria orientalis strain Shintoku	20715331
TOT_030000134	CDS	TOT_030000134	NC_025262.1	304344	305830	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(304344..304460,304491..304553,304591..304673,304716..305005,305044..305140,305173..305350,305380..305586,305621..305830))	Theileria orientalis strain Shintoku	20715332
TOT_030000135	CDS	TOT_030000135	NC_025262.1	306048	307010	D	zinc finger, C2H2-type domain containing protein; uncharacterized protein	join(306048..306137,306200..306554,306587..306719,306769..306835,306873..307010)	Theileria orientalis strain Shintoku	20715333
TOT_030000136	CDS	TOT_030000136	NC_025262.1	307166	307583	R	U6 snRNA-associated sm-like protein	complement(join(307166..307260,307305..307376,307481..307583))	Theileria orientalis strain Shintoku	20715334
TOT_030000137	CDS	TOT_030000137	NC_025262.1	308283	309859	D	conserved hypothetical protein	join(308283..309680,309800..309859)	Theileria orientalis strain Shintoku	20715335
TOT_030000138	CDS	TOT_030000138	NC_025262.1	310063	311054	D	conserved hypothetical protein	join(310063..310854,310932..311054)	Theileria orientalis strain Shintoku	20715336
TOT_030000139	CDS	TOT_030000139	NC_025262.1	311143	313395	R	FAD-dependent glycerol-3-phosphate dehydrogenase	complement(join(311143..311579,311807..312054,312093..312711,312771..313106,313185..313395))	Theileria orientalis strain Shintoku	20715337
TOT_030000140	CDS	TOT_030000140	NC_025262.1	313782	317312	R	hypothetical protein	complement(313782..317312)	Theileria orientalis strain Shintoku	20715338
TOT_030000141	CDS	TOT_030000141	NC_025262.1	318797	321068	D	conserved hypothetical protein	join(318797..319292,319324..319380,319451..319807,319862..320251,320529..320683,320922..321068)	Theileria orientalis strain Shintoku	20715339
TOT_030000142	CDS	TOT_030000142	NC_025262.1	321428	321868	D	conserved hypothetical protein	321428..321868	Theileria orientalis strain Shintoku	20715340
TOT_030000143	CDS	TOT_030000143	NC_025262.1	322148	322546	D	conserved hypothetical protein	322148..322546	Theileria orientalis strain Shintoku	20715341
TOT_030000144	CDS	TOT_030000144	NC_025262.1	322914	323777	D	conserved hypothetical protein	322914..323777	Theileria orientalis strain Shintoku	20715342
TOT_030000145	CDS	TOT_030000145	NC_025262.1	323998	324276	D	peptide chain release factor 2	join(323998..324123,324196..324276)	Theileria orientalis strain Shintoku	20715343
TOT_030000146	CDS	TOT_030000146	NC_025262.1	324371	324734	R	conserved hypothetical protein	complement(join(324371..324622,324645..324734))	Theileria orientalis strain Shintoku	20715344
TOT_030000147	CDS	TOT_030000147	NC_025262.1	324856	326508	R	T-complex protein subunit beta	complement(324856..326508)	Theileria orientalis strain Shintoku	20715345
TOT_030000148	CDS	TOT_030000148	NC_025262.1	327539	329062	D	conserved hypothetical protein	join(327539..328024,328061..329062)	Theileria orientalis strain Shintoku	20715346
TOT_030000149	CDS	TOT_030000149	NC_025262.1	329361	330782	D	conserved hypothetical protein	329361..330782	Theileria orientalis strain Shintoku	20715347
TOT_030000150	CDS	TOT_030000150	NC_025262.1	331188	331825	R	exon junction complex protein	complement(join(331188..331607,331640..331825))	Theileria orientalis strain Shintoku	20715348
TOT_030000151	CDS	TOT_030000151	NC_025262.1	332214	332525	D	hypothetical protein	join(332214..332231,332400..332525)	Theileria orientalis strain Shintoku	20715349
TOT_030000152	CDS	TOT_030000152	NC_025262.1	333051	334175	D	eukaryotic translation initiation factor 5	333051..334175	Theileria orientalis strain Shintoku	20715350
TOT_030000153	CDS	TOT_030000153	NC_025262.1	334251	334906	R	hypothetical protein	complement(join(334251..334373,334401..334515,334737..334906))	Theileria orientalis strain Shintoku	20715351
TOT_030000154	CDS	TOT_030000154	NC_025262.1	335154	335582	D	40S ribosomal protein S12	335154..335582	Theileria orientalis strain Shintoku	20715352
TOT_030000155	CDS	TOT_030000155	NC_025262.1	335685	336191	R	40S ribosomal protein S19	complement(335685..336191)	Theileria orientalis strain Shintoku	20715353
TOT_030000156	CDS	TOT_030000156	NC_025262.1	337123	338928	D	RabGDI protein	join(337123..337140,337205..337265,337326..337418,337492..337777,337869..338443,338611..338712,338822..338928)	Theileria orientalis strain Shintoku	20715354
TOT_030000157	CDS	TOT_030000157	NC_025262.1	339061	339312	R	conserved hypothetical protein	complement(339061..339312)	Theileria orientalis strain Shintoku	20715355
TOT_030000158	CDS	TOT_030000158	NC_025262.1	339373	342261	D	SWIRM domain containing protein; uncharacterized protein	join(339373..339652,339719..339841,339907..340019,340112..340433,340514..340673,341280..341707,341954..342261)	Theileria orientalis strain Shintoku	20715356
TOT_030000159	CDS	TOT_030000159	NC_025262.1	342302	342403	R	hypothetical protein	complement(342302..342403)	Theileria orientalis strain Shintoku	20715357
TOT_030000160	CDS	TOT_030000160	NC_025262.1	342478	343442	D	conserved hypothetical protein	join(342478..342595,342613..343047,343117..343442)	Theileria orientalis strain Shintoku	20715358
TOT_030000161	CDS	TOT_030000161	NC_025262.1	343456	344737	D	protein farnesyltransferase subunit alpha	join(343456..343723,343816..343986,344054..344097,344156..344271,344365..344737)	Theileria orientalis strain Shintoku	20715359
TOT_030000162	CDS	TOT_030000162	NC_025262.1	345372	346808	R	conserved hypothetical protein	complement(345372..346808)	Theileria orientalis strain Shintoku	20715360
TOT_030000163	CDS	TOT_030000163	NC_025262.1	346904	347703	R	hypothetical protein	complement(join(346904..347103,347269..347462,347648..347703))	Theileria orientalis strain Shintoku	20715361
TOT_030000164	CDS	TOT_030000164	NC_025262.1	347784	348346	R	40S ribosomal protein S17	complement(join(347784..348011,348080..348176,348245..348309,348344..348346))	Theileria orientalis strain Shintoku	20715362
TOT_030000165	CDS	TOT_030000165	NC_025262.1	348892	351069	R	protein of unknown function Met10 family protein; uncharacterized protein	complement(join(348892..349148,349179..349388,349477..349533,349632..349687,349763..349818,349944..349995,350034..350073,350343..350444,350569..350648,350679..350759,350831..351069))	Theileria orientalis strain Shintoku	20715363
TOT_030000166	CDS	TOT_030000166	NC_025262.1	352067	353444	D	SET domain containing protein; uncharacterized protein	join(352067..352107,352138..352175,352878..352974,353012..353126,353176..353274,353382..353444)	Theileria orientalis strain Shintoku	20715364
TOT_030000167	CDS	TOT_030000167	NC_025262.1	353553	355913	D	conserved hypothetical protein	join(353553..353955,354060..354349,354578..355098,355150..355384,355574..355711,355788..355913)	Theileria orientalis strain Shintoku	20715365
TOT_030000168	CDS	TOT_030000168	NC_025262.1	356007	356850	R	Mak16 protein family protein; uncharacterized protein	complement(join(356007..356506,356599..356708,356792..356850))	Theileria orientalis strain Shintoku	20715366
TOT_030000169	CDS	TOT_030000169	NC_025262.1	357353	360169	D	AAA ATPase, core domain containing protein; uncharacterized protein	join(357353..357434,357541..357677,357774..357901,358006..358112,358167..358305,358407..358530,358662..358736,358769..358825,358856..359046,359170..359386,359526..359813,360053..360169)	Theileria orientalis strain Shintoku	20715367
TOT_030000170	CDS	TOT_030000170	NC_025262.1	360744	363391	R	conserved hypothetical protein	complement(join(360744..361376,361806..363154,363211..363391))	Theileria orientalis strain Shintoku	20715368
TOT_030000171	CDS	TOT_030000171	NC_025262.1	364095	365708	D	hypothetical protein	join(364095..364103,364127..364356,365136..365419,365527..365708)	Theileria orientalis strain Shintoku	20715369
TOT_030000172	CDS	TOT_030000172	NC_025262.1	365957	371788	R	conserved hypothetical protein	complement(join(365957..366396,366472..366819,366934..367275,367330..368608,368873..369328,369425..369574,369647..369807,369883..371788))	Theileria orientalis strain Shintoku	20715370
TOT_030000173	CDS	TOT_030000173	NC_025262.1	372121	372909	R	40S ribosomal protein S3a	complement(372121..372909)	Theileria orientalis strain Shintoku	20715371
TOT_030000174	CDS	TOT_030000174	NC_025262.1	373557	373899	R	translation machinery associated TMA7 family protein; uncharacterized protein	complement(join(373557..373614,373749..373843,373882..373899))	Theileria orientalis strain Shintoku	20715372
TOT_030000903	CDS	TOT_030000903	NC_025262.1	374212	375612	R	elongation factor tu	complement(join(374212..374346,374407..375612))	Theileria orientalis strain Shintoku	20716040
TOT_030000904	CDS	TOT_030000904	NC_025262.1	375915	378089	R	protein kinase	complement(join(375915..375998,376029..376288,376372..376481,376581..376697,376787..376925,377021..377117,377207..377244,377280..377349,377381..377416,377439..377550,377610..377711,377848..377923,378011..378089))	Theileria orientalis strain Shintoku	20716041
TOT_030000177	CDS	TOT_030000177	NC_025262.1	378332	379151	R	SRP40, C-terminal domain containing protein; uncharacterized protein	complement(join(378332..378384,378439..378630,378660..378867,379026..379151))	Theileria orientalis strain Shintoku	20715373
TOT_030000178	CDS	TOT_030000178	NC_025262.1	379442	379920	D	RNase P, Rpr2/Rpp21 subunit family protein; uncharacterized protein	join(379442..379557,379618..379655,379748..379920)	Theileria orientalis strain Shintoku	20715374
TOT_030000179	CDS	TOT_030000179	NC_025262.1	380901	381005	R	conserved hypothetical protein	complement(380901..381005)	Theileria orientalis strain Shintoku	20715375
TOT_030000180	CDS	TOT_030000180	NC_025262.1	381544	381799	R	BIR protein	complement(join(381544..381677,381742..381799))	Theileria orientalis strain Shintoku	20715376
TOT_030000181	CDS	TOT_030000181	NC_025262.1	382909	384078	D	conserved hypothetical protein	join(382909..383593,383756..383948,384009..384078)	Theileria orientalis strain Shintoku	20715377
TOT_030000182	CDS	TOT_030000182	NC_025262.1	384175	387132	D	TATA box binding protein associated factor (TAF) domain containing protein; uncharacterized protein	join(384175..384423,384551..385084,385222..385312,385457..385632,385692..385799,385986..386303,386499..386580,386645..386868,386974..387132)	Theileria orientalis strain Shintoku	20715378
TOT_030000183	CDS	TOT_030000183	NC_025262.1	387272	390254	R	DNA topoisomerase III	complement(join(387272..387517,387582..387653,387693..387743,387776..387838,387890..387956,388061..388133,388203..388400,388463..388675,388757..388799,388923..389064,389097..389204,389282..389418,389501..389602,389808..389898,389942..390019,390049..390140,390171..390254))	Theileria orientalis strain Shintoku	20715379
TOT_030000184	CDS	TOT_030000184	NC_025262.1	390607	392938	R	RNA splicing factor	complement(join(390607..390903,391163..392034,392080..392359,392438..392938))	Theileria orientalis strain Shintoku	20715380
TOT_030000185	CDS	TOT_030000185	NC_025262.1	393658	394701	R	conserved hypothetical protein	complement(join(393658..393825,393924..394245,394373..394701))	Theileria orientalis strain Shintoku	20715381
TOT_030000186	CDS	TOT_030000186	NC_025262.1	395554	396635	D	conserved hypothetical protein	join(395554..395929,396085..396635)	Theileria orientalis strain Shintoku	20715382
TOT_030000905	CDS	TOT_030000905	NC_025262.1	396802	399787	R	Vps52/Sac2 family protein; uncharacterized protein	complement(join(396802..396921,397030..397309,397486..398104,398315..398652,398725..398918,399017..399787))	Theileria orientalis strain Shintoku	20716042
TOT_030000906	CDS	TOT_030000906	NC_025262.1	400158	400679	R	vacuolar ATP synthase subunit G	complement(join(400158..400301,400405..400505,400589..400679))	Theileria orientalis strain Shintoku	20716043
TOT_030000189	CDS	TOT_030000189	NC_025262.1	400942	402400	D	GCN5-related N-acetyltransferase domain containing protein; uncharacterized protein	join(400942..401308,401665..401762,402188..402400)	Theileria orientalis strain Shintoku	20715383
TOT_030000190	CDS	TOT_030000190	NC_025262.1	402653	403523	R	60S ribosomal protein L25	complement(join(402653..402737,402964..403209,403363..403523))	Theileria orientalis strain Shintoku	20715384
TOT_030000191	CDS	TOT_030000191	NC_025262.1	404069	405723	R	conserved hypothetical protein	complement(join(404069..404224,404288..404344,404376..404816,404884..405102,405229..405723))	Theileria orientalis strain Shintoku	20715385
TOT_030000192	CDS	TOT_030000192	NC_025262.1	405976	408445	R	conserved hypothetical protein	complement(join(405976..406557,406660..406716,406748..407218,407324..407631,407706..408138,408260..408445))	Theileria orientalis strain Shintoku	20715386
TOT_030000193	CDS	TOT_030000193	NC_025262.1	409822	410670	D	integral membrane protein	join(409822..409866,410023..410491,410591..410670)	Theileria orientalis strain Shintoku	20715387
TOT_030000194	CDS	TOT_030000194	NC_025262.1	411538	412842	D	conserved hypothetical protein	join(411538..412533,412645..412842)	Theileria orientalis strain Shintoku	20715388
TOT_030000195	CDS	TOT_030000195	NC_025262.1	413179	416167	R	zinc finger, RanBP2-type domain containing protein; uncharacterized protein	complement(join(413179..415991,416074..416167))	Theileria orientalis strain Shintoku	20715389
TOT_030000196	CDS	TOT_030000196	NC_025262.1	416227	418249	R	aspartyl(acid) protease	complement(join(416227..416388,416757..416934,417031..417084,417114..418249))	Theileria orientalis strain Shintoku	20715390
TOT_030000197	CDS	TOT_030000197	NC_025262.1	419191	423822	D	ubiquitin carboxyl-terminal hydrolase	join(419191..421024,421136..421527,421603..421874,422025..422642,422880..422967,423052..423822)	Theileria orientalis strain Shintoku	20715391
TOT_030000198	CDS	TOT_030000198	NC_025262.1	423848	425091	D	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	join(423848..424019,424050..424222,424255..424477,424511..425091)	Theileria orientalis strain Shintoku	20715392
TOT_030000199	CDS	TOT_030000199	NC_025262.1	425351	426200	R	conserved hypothetical protein	complement(join(425351..425468,425591..425839,425869..426005,426052..426128,426161..426200))	Theileria orientalis strain Shintoku	20715393
TOT_030000200	CDS	TOT_030000200	NC_025262.1	426444	428918	D	ferrodoxin reductase-like protein	join(426444..426648,426681..426896,426927..427004,427066..427151,427213..427333,427364..427593,427645..427779,427826..427909,428001..428113,428172..428330,428393..428457,428513..428648,428813..428918)	Theileria orientalis strain Shintoku	20715394
TOT_030000201	CDS	TOT_030000201	NC_025262.1	429235	429664	R	conserved hypothetical protein	complement(join(429235..429353,429418..429515,429558..429664))	Theileria orientalis strain Shintoku	20715395
TOT_030000202	CDS	TOT_030000202	NC_025262.1	429847	442451	R	conserved hypothetical protein	complement(join(429847..429982,430071..430152,430301..431376,431509..431996,432120..434602,434780..436723,436859..437675,437736..438372,438424..440071,440129..440688,440977..442451))	Theileria orientalis strain Shintoku	20715396
TOT_030000203	CDS	TOT_030000203	NC_025262.1	443610	450434	D	DEAD/DEAH-like helicase	443610..450434	Theileria orientalis strain Shintoku	20715397
TOT_030000204	CDS	TOT_030000204	NC_025262.1	450765	451559	D	Ras-related GTPase	join(450765..450814,450848..450915,450947..451005,451038..451324,451376..451559)	Theileria orientalis strain Shintoku	20715398
TOT_030000205	CDS	TOT_030000205	NC_025262.1	451772	452410	D	retrieval of early ER protein Rer1 family protein; uncharacterized protein	join(451772..452342,452376..452410)	Theileria orientalis strain Shintoku	20715399
TOT_030000206	CDS	TOT_030000206	NC_025262.1	452705	458928	R	conserved hypothetical protein	complement(join(452705..452849,452985..453086,453244..453469,453624..453796,453911..454692,454933..455485,455594..455851,455975..456941,456999..458093,458244..458928))	Theileria orientalis strain Shintoku	20715400
TOT_030000207	CDS	TOT_030000207	NC_025262.1	459491	462802	D	cullin family protein; uncharacterized protein	join(459491..459545,459631..459749,459780..459871,459904..460054,460085..460155,460187..460349,460379..460510,460542..460766,460822..460974,461006..461069,461171..461280,461322..461412,461467..461551,461672..461969,462000..462035,462120..462192,462226..462326,462425..462517,462557..462802)	Theileria orientalis strain Shintoku	20715401
TOT_030000208	CDS	TOT_030000208	NC_025262.1	463144	464703	R	conserved hypothetical protein	complement(463144..464703)	Theileria orientalis strain Shintoku	20715402
TOT_030000209	CDS	TOT_030000209	NC_025262.1	465593	466129	D	zinc finger, RanBP2-type domain containing protein; uncharacterized protein	465593..466129	Theileria orientalis strain Shintoku	20715403
TOT_030000210	CDS	TOT_030000210	NC_025262.1	466227	468722	D	conserved hypothetical protein	join(466227..467854,467963..468722)	Theileria orientalis strain Shintoku	20715404
TOT_030000211	CDS	TOT_030000211	NC_025262.1	468937	470026	R	synaptic glycoprotein sc2	complement(join(468937..469181,469212..469378,469408..469530,469562..469691,469724..469804,469836..469877,469924..470026))	Theileria orientalis strain Shintoku	20715405
TOT_030000212	CDS	TOT_030000212	NC_025262.1	470325	471005	R	Alba, DNA/RNA-binding protein family protein; uncharacterized protein	complement(join(470325..470362,470507..470688,470755..471005))	Theileria orientalis strain Shintoku	20715406
TOT_030000213	CDS	TOT_030000213	NC_025262.1	471325	471728	R	hypothetical protein	complement(join(471325..471445,471601..471728))	Theileria orientalis strain Shintoku	20715407
TOT_030000214	CDS	TOT_030000214	NC_025262.1	471983	477160	R	regulator of nonsense transcripts-related protein	complement(join(471983..472133,472149..472216,472272..472454,472486..472551,472582..472648,472757..472898,473038..473177,473246..473354,473499..473699,473772..473867,474042..474231,474274..474366,474501..474818,474918..475236,475285..475450,475488..475650,475760..475903,475940..476026,476057..476203,476237..476364,476395..476482,476512..476607,476657..477160))	Theileria orientalis strain Shintoku	20715408
TOT_030000215	CDS	TOT_030000215	NC_025262.1	477329	477922	D	conserved hypothetical protein	join(477329..477677,477792..477922)	Theileria orientalis strain Shintoku	20715409
TOT_030000216	CDS	TOT_030000216	NC_025262.1	477952	479341	R	conserved hypothetical protein	complement(join(477952..478090,478209..479341))	Theileria orientalis strain Shintoku	20715410
TOT_030000217	CDS	TOT_030000217	NC_025262.1	479591	487042	R	mRNA transport factor	complement(join(479591..482326,482384..482928,483043..483528,483931..484738,484812..485207,485345..485559,485716..485919,486744..486935,487015..487042))	Theileria orientalis strain Shintoku	20715411
TOT_030000218	CDS	TOT_030000218	NC_025262.1	487269	491135	R	conserved hypothetical protein	complement(join(487269..488723,488982..491135))	Theileria orientalis strain Shintoku	20715412
TOT_030000219	CDS	TOT_030000219	NC_025262.1	492014	494012	D	conserved hypothetical protein	join(492014..492036,492173..493477,493550..494012)	Theileria orientalis strain Shintoku	20715413
TOT_030000220	CDS	TOT_030000220	NC_025262.1	494240	496381	R	conserved hypothetical protein	complement(join(494240..494332,494376..494495,494552..494724,494914..495031,495063..495173,495203..495474,495504..495642,496241..496381))	Theileria orientalis strain Shintoku	20715414
TOT_030000221	CDS	TOT_030000221	NC_025262.1	496864	497502	D	conserved hypothetical protein	496864..497502	Theileria orientalis strain Shintoku	20715415
TOT_030000222	CDS	TOT_030000222	NC_025262.1	497711	498494	R	centrin	complement(join(497711..497938,498038..498192,498380..498494))	Theileria orientalis strain Shintoku	20715416
TOT_030000223	CDS	TOT_030000223	NC_025262.1	499124	503022	D	conserved hypothetical protein	join(499124..499234,499366..501894,501964..503022)	Theileria orientalis strain Shintoku	20715417
TOT_030000224	CDS	TOT_030000224	NC_025262.1	503538	506194	R	conserved hypothetical protein	complement(join(503538..503616,503650..503786,503927..505462,505569..505810,506020..506194))	Theileria orientalis strain Shintoku	20715418
TOT_030000225	CDS	TOT_030000225	NC_025262.1	506486	507014	R	conserved hypothetical protein	complement(join(506486..506647,506742..507014))	Theileria orientalis strain Shintoku	20715419
TOT_030000226	CDS	TOT_030000226	NC_025262.1	507179	507726	D	60S ribosomal protein L28	join(507179..507347,507423..507510,507561..507726)	Theileria orientalis strain Shintoku	20715420
TOT_030000227	CDS	TOT_030000227	NC_025262.1	507887	508345	R	60S ribosomal protein L35a	complement(join(507887..508157,508263..508345))	Theileria orientalis strain Shintoku	20715421
TOT_030000228	CDS	TOT_030000228	NC_025262.1	509022	510093	D	conserved hypothetical protein	join(509022..509276,509371..509666,509751..510093)	Theileria orientalis strain Shintoku	20715422
TOT_030000229	CDS	TOT_030000229	NC_025262.1	510216	511513	R	cobalamin synthesis protein	complement(join(510216..510408,510468..511318,511463..511513))	Theileria orientalis strain Shintoku	20715423
TOT_030000230	CDS	TOT_030000230	NC_025262.1	511615	515139	R	BOP1, N-terminal domain containing protein; uncharacterized protein	complement(join(511615..511765,511838..512043,512295..512448,512482..512556,512659..512802,512894..513110,513228..513294,513338..513406,513448..513951,514080..514317,514386..514463,514495..514580,514622..514773,514857..515139))	Theileria orientalis strain Shintoku	20715424
TOT_030000231	CDS	TOT_030000231	NC_025262.1	515831	520278	D	conserved hypothetical protein	join(515831..516256,516372..519549,519686..520278)	Theileria orientalis strain Shintoku	20715425
TOT_030000907	CDS	TOT_030000907	NC_025262.1	520342	520911	R	conserved hypothetical protein	complement(520342..520911)	Theileria orientalis strain Shintoku	20716044
TOT_030000233	CDS	TOT_030000233	NC_025262.1	521183	522100	D	conserved hypothetical protein	521183..522100	Theileria orientalis strain Shintoku	20715426
TOT_030000234	CDS	TOT_030000234	NC_025262.1	522417	523902	R	cytochrome oxidase assembly family protein; uncharacterized protein	complement(join(522417..522987,523024..523117,523224..523404,523438..523586,523620..523902))	Theileria orientalis strain Shintoku	20715427
TOT_030000235	CDS	TOT_030000235	NC_025262.1	523961	525647	D	methionine aminopeptidase	join(523961..524240,524354..524512,524545..524709,524823..525110,525195..525400,525435..525647)	Theileria orientalis strain Shintoku	20715428
TOT_030000236	CDS	TOT_030000236	NC_025262.1	526544	527443	D	mitochondrial glycoprotein family protein; uncharacterized protein	join(526544..526805,526945..527004,527037..527443)	Theileria orientalis strain Shintoku	20715429
TOT_030000237	CDS	TOT_030000237	NC_025262.1	527794	546382	D	ATPase associated with various cellular activities, AAA-5 domain containing protein; uncharacterized protein	join(527794..528410,528472..529778,529899..530160,530251..530470,530582..531163,531257..531593,531633..531737,531974..532929,533131..533291,533334..533733,533941..534273,534763..535305,535690..536257,536441..536590,536896..537457,537953..539023,539120..539414,539463..540248,540740..541081,541164..541613,541735..541877,541919..542099,542131..542235,542328..543425,543540..544330,544428..544712,544804..545184,545373..545610,545649..545698,545849..546162,546273..546382)	Theileria orientalis strain Shintoku	20715430
TOT_030000238	CDS	TOT_030000238	NC_025262.1	546537	547014	D	conserved hypothetical protein	join(546537..546633,546671..547014)	Theileria orientalis strain Shintoku	20715431
TOT_030000239	CDS	TOT_030000239	NC_025262.1	547254	547803	D	conserved hypothetical protein	join(547254..547350,547478..547803)	Theileria orientalis strain Shintoku	20715432
TOT_030000240	CDS	TOT_030000240	NC_025262.1	548139	548279	R	hypothetical protein	complement(548139..548279)	Theileria orientalis strain Shintoku	20715433
TOT_030000241	CDS	TOT_030000241	NC_025262.1	548751	551227	R	heat shock chaperonin-binding domain containing protein; uncharacterized protein	complement(join(548751..549032,549204..549368,549451..549551,549779..549836,549937..550119,550158..550391,550423..550557,550589..550758,550811..550873,550912..550984,551018..551227))	Theileria orientalis strain Shintoku	20715434
TOT_030000242	CDS	TOT_030000242	NC_025262.1	551407	552609	R	queuine tRNA-ribosyltransferase-like protein	complement(551407..552609)	Theileria orientalis strain Shintoku	20715435
TOT_030000243	CDS	TOT_030000243	NC_025262.1	552872	553609	R	conserved hypothetical protein	complement(join(552872..552931,552962..553081,553113..553213,553244..553397,553440..553550,553589..553609))	Theileria orientalis strain Shintoku	20715436
TOT_030000908	CDS	TOT_030000908	NC_025262.1	553977	555545	D	conserved hypothetical protein	join(553977..554432,554464..554970,555028..555278,555308..555545)	Theileria orientalis strain Shintoku	20716045
TOT_030000245	CDS	TOT_030000245	NC_025262.1	555952	556617	D	conserved hypothetical protein	555952..556617	Theileria orientalis strain Shintoku	20715437
TOT_030000246	CDS	TOT_030000246	NC_025262.1	557069	558469	D	conserved hypothetical protein	join(557069..557544,557593..558469)	Theileria orientalis strain Shintoku	20715438
TOT_030000247	CDS	TOT_030000247	NC_025262.1	558860	560771	R	conserved hypothetical protein	complement(join(558860..558988,559072..559186,559216..559282,559323..559370,559402..559461,559536..559901,559931..560065,560198..560546,560580..560771))	Theileria orientalis strain Shintoku	20715439
TOT_030000248	CDS	TOT_030000248	NC_025262.1	561826	563455	D	GTP-binding protein	join(561826..561878,561917..562046,562070..562306,562337..562574,562607..562848,563026..563201,563362..563455)	Theileria orientalis strain Shintoku	20715440
TOT_030000249	CDS	TOT_030000249	NC_025262.1	563543	564265	R	protein CWC15 homolog	complement(join(563543..563606,563644..564175,564211..564265))	Theileria orientalis strain Shintoku	20715441
TOT_030000250	CDS	TOT_030000250	NC_025262.1	564567	566697	D	BING4, C-terminal domain containing protein; uncharacterized protein	join(564567..564632,564666..564860,564911..565048,565079..565136,565167..565234,565265..565335,565366..565516,565574..565649,565686..565897,566049..566189,566256..566474,566506..566697)	Theileria orientalis strain Shintoku	20715442
TOT_030000251	CDS	TOT_030000251	NC_025262.1	566819	568444	D	hypothetical protein	join(566819..566866,566943..567276,567308..567578,567617..567731,567762..567825,567912..567964,567999..568074,568113..568195,568229..568312,568379..568444)	Theileria orientalis strain Shintoku	20715443
TOT_030000252	CDS	TOT_030000252	NC_025262.1	568585	569109	D	DNA polymerase epsilon subunit B domain containing protein; uncharacterized protein	568585..569109	Theileria orientalis strain Shintoku	20715444
TOT_030000253	CDS	TOT_030000253	NC_025262.1	569404	572956	D	protein of unknown function DUF625 domain containing protein; uncharacterized protein	join(569404..569577,569684..569837,569873..569960,570025..570184,570273..570504,570573..571984,572196..572685,572780..572845,572895..572956)	Theileria orientalis strain Shintoku	20715445
TOT_030000254	CDS	TOT_030000254	NC_025262.1	572997	573296	D	hypothetical protein	572997..573296	Theileria orientalis strain Shintoku	20715446
TOT_030000255	CDS	TOT_030000255	NC_025262.1	573308	573719	D	hypothetical protein	join(573308..573599,573640..573719)	Theileria orientalis strain Shintoku	20715447
TOT_030000256	CDS	TOT_030000256	NC_025262.1	573995	576559	R	integral membrane protein	complement(join(573995..574416,574619..574772,574862..575188,575239..575449,575516..575705,575749..576559))	Theileria orientalis strain Shintoku	20715448
TOT_030000257	CDS	TOT_030000257	NC_025262.1	577446	577778	D	cold shock protein	577446..577778	Theileria orientalis strain Shintoku	20715449
TOT_030000258	CDS	TOT_030000258	NC_025262.1	578086	580092	D	ATP synthase subunit alpha	join(578086..578256,578397..578569,578632..578930,578977..579324,579446..580092)	Theileria orientalis strain Shintoku	20715450
TOT_030000259	CDS	TOT_030000259	NC_025262.1	580203	580638	R	conserved hypothetical protein	complement(join(580203..580369,580497..580638))	Theileria orientalis strain Shintoku	20715451
TOT_030000260	CDS	TOT_030000260	NC_025262.1	580919	582694	R	Sec1-like protein family protein; uncharacterized protein	complement(join(580919..580978,580990..581069,581221..582694))	Theileria orientalis strain Shintoku	20715452
TOT_030000261	CDS	TOT_030000261	NC_025262.1	583314	583597	D	ribosomal protein S30	join(583314..583317,583419..583597)	Theileria orientalis strain Shintoku	20715453
TOT_030000909	CDS	TOT_030000909	NC_025262.1	583641	584286	R	conserved hypothetical protein	complement(join(583641..584070,584138..584286))	Theileria orientalis strain Shintoku	20716046
TOT_030000263	CDS	TOT_030000263	NC_025262.1	584439	588686	R	BRCT domain containing protein; uncharacterized protein	complement(join(584439..584777,584975..585074,585108..585190,585257..585319,585442..585537,585569..585697,585827..586069,586149..586306,586424..586645,586853..586975,587021..588281,588342..588686))	Theileria orientalis strain Shintoku	20715454
TOT_030000264	CDS	TOT_030000264	NC_025262.1	588926	589651	R	conserved hypothetical protein	complement(join(588926..589203,589265..589297,589387..589533,589603..589651))	Theileria orientalis strain Shintoku	20715455
TOT_030000265	CDS	TOT_030000265	NC_025262.1	589858	590110	R	hypothetical protein	complement(join(589858..589971,590021..590110))	Theileria orientalis strain Shintoku	20715456
TOT_030000266	CDS	TOT_030000266	NC_025262.1	590129	591558	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(590129..590284,590352..590549,590682..590778,590812..591134,591179..591246,591278..591375,591464..591558))	Theileria orientalis strain Shintoku	20715457
TOT_030000267	CDS	TOT_030000267	NC_025262.1	591724	592121	D	protein of unknown function DUF652 family protein; uncharacterized protein	join(591724..591811,591909..591998,592033..592121)	Theileria orientalis strain Shintoku	20715458
TOT_030000268	CDS	TOT_030000268	NC_025262.1	592440	592803	D	hypothetical protein	join(592440..592525,592559..592628,592672..592803)	Theileria orientalis strain Shintoku	20715459
TOT_030000269	CDS	TOT_030000269	NC_025262.1	592730	593465	R	conserved hypothetical protein	complement(join(592730..592783,592899..593465))	Theileria orientalis strain Shintoku	20715460
TOT_030000270	CDS	TOT_030000270	NC_025262.1	593665	594610	D	ribosome biogenesis protein	join(593665..593774,593866..594610)	Theileria orientalis strain Shintoku	20715461
TOT_030000271	CDS	TOT_030000271	NC_025262.1	594707	596368	R	conserved hypothetical protein	complement(join(594707..594805,594837..594967,595028..595385,595556..596368))	Theileria orientalis strain Shintoku	20715462
TOT_030000272	CDS	TOT_030000272	NC_025262.1	596529	599784	R	SOH1-like protein	complement(join(596529..596659,596759..599382,599434..599704,599739..599784))	Theileria orientalis strain Shintoku	20715463
TOT_030000273	CDS	TOT_030000273	NC_025262.1	600031	600321	D	ubiquitin-like protein	join(600031..600136,600206..600321)	Theileria orientalis strain Shintoku	20715464
TOT_030000274	CDS	TOT_030000274	NC_025262.1	600869	601741	D	zinc finger, DHHC-type domain containing protein; uncharacterized protein	600869..601741	Theileria orientalis strain Shintoku	20715465
TOT_030000275	CDS	TOT_030000275	NC_025262.1	602028	603008	R	conserved hypothetical protein	complement(602028..603008)	Theileria orientalis strain Shintoku	20715466
TOT_030000276	CDS	TOT_030000276	NC_025262.1	603320	605638	D	molecular chaperone DnaJ	join(603320..603376,603479..603719,603792..605638)	Theileria orientalis strain Shintoku	20715467
TOT_030000277	CDS	TOT_030000277	NC_025262.1	606218	607517	R	conserved hypothetical protein	complement(join(606218..606440,606472..606707,606798..606913,606979..607057,607089..607517))	Theileria orientalis strain Shintoku	20715468
TOT_030000278	CDS	TOT_030000278	NC_025262.1	607668	608401	D	ribose 5-phosphate epimerase	join(607668..607697,607731..607892,607922..608101,608135..608401)	Theileria orientalis strain Shintoku	20715469
TOT_030000279	CDS	TOT_030000279	NC_025262.1	608619	609286	D	conserved hypothetical protein	join(608619..608862,608904..609286)	Theileria orientalis strain Shintoku	20715470
TOT_030000280	CDS	TOT_030000280	NC_025262.1	609449	611608	D	conserved hypothetical protein	609449..611608	Theileria orientalis strain Shintoku	20715471
TOT_030000281	CDS	TOT_030000281	NC_025262.1	611698	612750	R	calcyclin binding protein-like	complement(join(611698..611865,611976..612059,612089..612133,612169..612218,612250..612316,612369..612441,612473..612528,612566..612610,612655..612750))	Theileria orientalis strain Shintoku	20715472
TOT_030000282	CDS	TOT_030000282	NC_025262.1	612833	613722	R	nicotinate-nucleotide adenylyltransferase-like protein	complement(join(612833..612928,613119..613314,613352..613722))	Theileria orientalis strain Shintoku	20715473
TOT_030000283	CDS	TOT_030000283	NC_025262.1	614550	615043	R	conserved hypothetical protein	complement(join(614550..614667,614676..615043))	Theileria orientalis strain Shintoku	20715474
TOT_030000284	CDS	TOT_030000284	NC_025262.1	615624	616328	R	conserved hypothetical protein	complement(615624..616328)	Theileria orientalis strain Shintoku	20715475
TOT_030000285	CDS	TOT_030000285	NC_025262.1	616864	617625	R	conserved hypothetical protein	complement(616864..617625)	Theileria orientalis strain Shintoku	20715476
TOT_030000286	CDS	TOT_030000286	NC_025262.1	618140	618766	R	conserved hypothetical protein	complement(618140..618766)	Theileria orientalis strain Shintoku	20715477
TOT_030000287	CDS	TOT_030000287	NC_025262.1	619141	619770	R	conserved hypothetical protein	complement(619141..619770)	Theileria orientalis strain Shintoku	20715478
TOT_030000288	CDS	TOT_030000288	NC_025262.1	619921	620589	R	conserved hypothetical protein	complement(619921..620589)	Theileria orientalis strain Shintoku	20715479
TOT_030000289	CDS	TOT_030000289	NC_025262.1	620773	622622	R	conserved hypothetical protein	complement(join(620773..621477,621617..622261,622569..622622))	Theileria orientalis strain Shintoku	20715480
TOT_030000290	CDS	TOT_030000290	NC_025262.1	623129	625476	D	BTB/POZ-like domain containing protein; uncharacterized protein	join(623129..623175,623215..623281,623387..623504,623553..623640,623714..624113,624144..624290,624321..624489,624769..624985,625018..625195,625360..625476)	Theileria orientalis strain Shintoku	20715481
TOT_030000291	CDS	TOT_030000291	NC_025262.1	625611	626616	R	conserved hypothetical protein	complement(join(625611..625829,625867..625916,625956..626616))	Theileria orientalis strain Shintoku	20715482
TOT_030000292	CDS	TOT_030000292	NC_025262.1	626917	627669	D	conserved hypothetical protein	626917..627669	Theileria orientalis strain Shintoku	20715483
TOT_030000293	CDS	TOT_030000293	NC_025262.1	627775	628533	D	MSF1 domain containing protein; uncharacterized protein	join(627775..627822,627865..628009,628049..628160,628196..628310,628447..628533)	Theileria orientalis strain Shintoku	20715484
TOT_030000294	CDS	TOT_030000294	NC_025262.1	628519	631446	R	DNA helicase (DNA repair), Rad3 type family protein; uncharacterized protein	complement(join(628519..628802,628933..629130,629294..629459,629520..629533,629576..629728,629815..629974,630077..630874,630906..631191,631231..631349,631387..631446))	Theileria orientalis strain Shintoku	20715485
TOT_030000295	CDS	TOT_030000295	NC_025262.1	631880	634933	D	predicted protein	join(631880..631973,632005..632403,632435..632805,632846..632913,633136..633457,633538..633639,633725..633991,634106..634178,634183..634540,634615..634695,634834..634933)	Theileria orientalis strain Shintoku	20715486
TOT_030000296	CDS	TOT_030000296	NC_025262.1	635086	636313	R	geranylgeranyltransferase subunit beta	complement(join(635086..635318,635349..635429,635507..635751,635784..635833,635864..635947,636023..636313))	Theileria orientalis strain Shintoku	20715487
TOT_030000297	CDS	TOT_030000297	NC_025262.1	636484	637812	D	conserved hypothetical protein	join(636484..636534,636568..636623,636681..636796,636827..636989,637100..637425,637459..637526,637564..637812)	Theileria orientalis strain Shintoku	20715488
TOT_030000298	CDS	TOT_030000298	NC_025262.1	638014	640111	D	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	join(638014..638271,638312..638355,638389..638482,638512..638577,638630..638758,638793..638872,638915..639114,639167..639258,639297..639461,639502..639624,639715..639828,639860..639984,640018..640111)	Theileria orientalis strain Shintoku	20715489
TOT_030000299	CDS	TOT_030000299	NC_025262.1	640175	640512	R	zinc finger, DPH-type domain containing protein; uncharacterized protein	complement(join(640175..640269,640305..640512))	Theileria orientalis strain Shintoku	20715490
TOT_030000300	CDS	TOT_030000300	NC_025262.1	640608	641222	D	conserved hypothetical protein	640608..641222	Theileria orientalis strain Shintoku	20715491
TOT_030000301	CDS	TOT_030000301	NC_025262.1	641289	642073	R	ESCRT-II complex, vps25 subunit, N-terminal winged helix domain containing protein; uncharacterized protein	complement(join(641289..641975,642008..642073))	Theileria orientalis strain Shintoku	20715492
TOT_030000302	CDS	TOT_030000302	NC_025262.1	642190	643258	D	tRNA nucleotidyltransferase	join(642190..642284,642324..642636,642683..642868,642937..642985,643025..643173,643226..643258)	Theileria orientalis strain Shintoku	20715493
TOT_030000303	CDS	TOT_030000303	NC_025262.1	643389	645689	R	tRNA nucleotidyltransferase	complement(join(643389..643535,643585..643679,643711..643747,643780..643891,643925..644006,644228..644498,644564..645129,645188..645689))	Theileria orientalis strain Shintoku	20715494
TOT_030000304	CDS	TOT_030000304	NC_025262.1	645826	646346	D	conserved hypothetical protein	join(645826..646050,646099..646212,646254..646346)	Theileria orientalis strain Shintoku	20715495
TOT_030000910	CDS	TOT_030000910	NC_025262.1	646589	647300	D	conserved hypothetical protein	join(646589..646673,646712..646776,646815..647300)	Theileria orientalis strain Shintoku	20716047
TOT_030000306	CDS	TOT_030000306	NC_025262.1	647333	648608	R	palmitoyltransferase	complement(join(647333..647438,647620..647693,647724..648608))	Theileria orientalis strain Shintoku	20715496
TOT_030000307	CDS	TOT_030000307	NC_025262.1	648860	651938	R	CGMP-dependent protein kinase	complement(join(648860..648937,648967..649044,649075..649394,649407..649545,649735..650105,650138..650240,650271..651731,651777..651938))	Theileria orientalis strain Shintoku	20715497
TOT_030000308	CDS	TOT_030000308	NC_025262.1	652154	653491	R	acid phosphatase	complement(join(652154..652854,652993..653491))	Theileria orientalis strain Shintoku	20715498
TOT_030000309	CDS	TOT_030000309	NC_025262.1	653704	654801	R	zinc transport protein	complement(join(653704..654101,654164..654354,654386..654440,654472..654621,654663..654801))	Theileria orientalis strain Shintoku	20715499
TOT_030000310	CDS	TOT_030000310	NC_025262.1	655158	656524	R	50S ribosomal protein L3	complement(join(655158..655419,655474..655742,655778..655939,656021..656095,656159..656524))	Theileria orientalis strain Shintoku	20715500
TOT_030000311	CDS	TOT_030000311	NC_025262.1	656597	658184	R	DAZ-associated protein 1	complement(join(656597..656748,656824..657267,657439..657517,657548..657652,657684..657872,657966..658184))	Theileria orientalis strain Shintoku	20715501
TOT_030000312	CDS	TOT_030000312	NC_025262.1	658460	659067	R	U6 snRNA-associated sm-like protein lsm4	complement(join(658460..658524,658587..658779,658819..658917,659062..659067))	Theileria orientalis strain Shintoku	20715502
TOT_030000313	CDS	TOT_030000313	NC_025262.1	659353	662714	D	conserved hypothetical protein	join(659353..660120,660203..660761,660794..660942,661065..661220,661432..661610,661877..662097,662142..662233,662324..662522,662554..662714)	Theileria orientalis strain Shintoku	20715503
TOT_030000314	CDS	TOT_030000314	NC_025262.1	662802	665577	D	conserved hypothetical protein	join(662802..663752,663782..663881,663887..665577)	Theileria orientalis strain Shintoku	20715504
TOT_030000911	CDS	TOT_030000911	NC_025262.1	665975	669031	D	telomere reverse transcriptase family protein; uncharacterized protein	join(665975..666668,666759..669031)	Theileria orientalis strain Shintoku	20716048
TOT_030000316	CDS	TOT_030000316	NC_025262.1	669262	670996	R	conserved hypothetical protein	complement(join(669262..669663,669820..669945,669999..670180,670260..670337,670378..670545,670576..670996))	Theileria orientalis strain Shintoku	20715505
TOT_030000317	CDS	TOT_030000317	NC_025262.1	671100	671427	R	conserved hypothetical protein	complement(join(671100..671242,671274..671427))	Theileria orientalis strain Shintoku	20715506
TOT_030000318	CDS	TOT_030000318	NC_025262.1	672118	673146	R	zinc finger, FYVE/PHD-type domain containing protein; uncharacterized protein	complement(join(672118..672258,672362..672469,672499..672660,672691..672752,672784..672842,672910..673000,673035..673146))	Theileria orientalis strain Shintoku	20715507
TOT_030000319	CDS	TOT_030000319	NC_025262.1	673374	675187	R	conserved hypothetical protein	complement(join(673374..673907,673939..673976,674009..674068,674112..674228,674262..674384,674415..674559,674641..674958,674993..675126,675163..675187))	Theileria orientalis strain Shintoku	20715508
TOT_030000320	CDS	TOT_030000320	NC_025262.1	675297	675953	D	protein of unknown function DUF339 family protein; uncharacterized protein	675297..675953	Theileria orientalis strain Shintoku	20715509
TOT_030000321	CDS	TOT_030000321	NC_025262.1	677131	678969	D	conserved hypothetical protein	677131..678969	Theileria orientalis strain Shintoku	20715510
TOT_030000322	CDS	TOT_030000322	NC_025262.1	679019	679174	R	hypothetical protein	complement(679019..679174)	Theileria orientalis strain Shintoku	20715511
TOT_030000912	CDS	TOT_030000912	NC_025262.1	679451	680108	D	rubredoxin-type Fe(Cys)4 protein domain containing protein; uncharacterized protein	join(679451..679739,679899..680017,680052..680108)	Theileria orientalis strain Shintoku	20716049
TOT_030000324	CDS	TOT_030000324	NC_025262.1	680681	683314	R	ribonucleoside-diphosphate reductase large chain	complement(680681..683314)	Theileria orientalis strain Shintoku	20715512
TOT_030000325	CDS	TOT_030000325	NC_025262.1	683988	686858	R	ATP-dependent Clp protease proteolytic subunit	complement(join(683988..684101,684136..684280,684314..684565,684734..684810,684842..684943,684979..685357,685389..685559,685595..686103,686189..686440,686472..686511,686544..686630,686661..686728,686760..686858))	Theileria orientalis strain Shintoku	20715513
TOT_030000913	CDS	TOT_030000913	NC_025262.1	687328	688027	R	bis-(5'-nucleosyl)-[tri-or tetra-] phosphatase	complement(join(687328..687427,687468..687592,687638..687751,687839..688027))	Theileria orientalis strain Shintoku	20716050
TOT_030000327	CDS	TOT_030000327	NC_025262.1	688442	697443	D	chromosome condensation protein	join(688442..689615,689801..690934,691001..691039,691087..691157,691232..691291,691331..691623,691719..691802,692009..692775,692805..693049,693117..693383,693417..693668,693698..694098,694131..694473,694505..694662,694706..694796,694828..694899,694933..695361,695403..695614,695645..695706,695738..697443)	Theileria orientalis strain Shintoku	20715514
TOT_030000328	CDS	TOT_030000328	NC_025262.1	697675	698727	R	glucose-6-phosphate/phosphate translocator	complement(697675..698727)	Theileria orientalis strain Shintoku	20715515
TOT_030000329	CDS	TOT_030000329	NC_025262.1	699895	701165	D	conserved hypothetical protein	join(699895..700125,700160..700243,700274..701014,701058..701165)	Theileria orientalis strain Shintoku	20715516
TOT_030000330	CDS	TOT_030000330	NC_025262.1	701453	705208	D	serine/threonine-protein kinase ripk4	join(701453..702931,703013..703651,703718..703964,704067..705208)	Theileria orientalis strain Shintoku	20715517
TOT_030000331	CDS	TOT_030000331	NC_025262.1	705562	707288	D	NADH dehydrogenase	join(705562..705767,705809..707288)	Theileria orientalis strain Shintoku	20715518
TOT_030000332	CDS	TOT_030000332	NC_025262.1	707300	707955	R	ubiquitin carrier protein	complement(join(707300..707428,707545..707748,707806..707955))	Theileria orientalis strain Shintoku	20715519
TOT_030000333	CDS	TOT_030000333	NC_025262.1	708436	710184	D	major facilitator superfamily MFS-1 protein	join(708436..708580,708613..708735,708767..709018,709102..709721,709754..710029,710062..710184)	Theileria orientalis strain Shintoku	20715520
TOT_030000334	CDS	TOT_030000334	NC_025262.1	710432	711224	R	GINS complex, Psf3 component family protein; uncharacterized protein	complement(join(710432..710523,710613..710755,710797..710984,711020..711115,711150..711224))	Theileria orientalis strain Shintoku	20715521
TOT_030000335	CDS	TOT_030000335	NC_025262.1	712041	713861	D	major facilitator superfamily MFS-1 protein	join(712041..712143,712185..712307,712339..712590,712622..713211,713452..713727,713760..713861)	Theileria orientalis strain Shintoku	20715522
TOT_030000336	CDS	TOT_030000336	NC_025262.1	714057	715639	D	major facilitator superfamily MFS-1 protein	join(714057..714345,714376..714627,714749..715314,715346..715639)	Theileria orientalis strain Shintoku	20715523
TOT_030000337	CDS	TOT_030000337	NC_025262.1	716113	717960	D	conserved hypothetical protein	join(716113..716254,716292..716415,716524..716696,716729..716970,717160..717525,717559..717825,717856..717960)	Theileria orientalis strain Shintoku	20715524
TOT_030000338	CDS	TOT_030000338	NC_025262.1	718252	718970	D	protein of unknown function DUF701, zinc-binding putative family protein; uncharacterized protein	join(718252..718379,718412..718970)	Theileria orientalis strain Shintoku	20715525
TOT_030000339	CDS	TOT_030000339	NC_025262.1	719174	720606	D	Mg2+ transporter protein, CorA-like family protein; uncharacterized protein	join(719174..719777,719882..720144,720176..720241,720276..720429,720470..720606)	Theileria orientalis strain Shintoku	20715526
TOT_030000340	CDS	TOT_030000340	NC_025262.1	721090	724064	D	DNA ligase 1 precursor	join(721090..721141,721176..721443,721476..721637,721727..721830,721848..722026,722062..722166,722199..722575,722696..722885,722952..723153,723184..723338,723439..723624,723659..723766,723951..724064)	Theileria orientalis strain Shintoku	20715527
TOT_030000341	CDS	TOT_030000341	NC_025262.1	724255	725703	R	conserved hypothetical protein	complement(join(724255..724322,724403..724730,724806..724940,725083..725158,725192..725541,725572..725703))	Theileria orientalis strain Shintoku	20715528
TOT_030000342	CDS	TOT_030000342	NC_025262.1	725893	726690	R	conserved hypothetical protein	complement(join(725893..725978,726010..726321,726354..726489,726523..726690))	Theileria orientalis strain Shintoku	20715529
TOT_030000343	CDS	TOT_030000343	NC_025262.1	728544	731637	D	conserved hypothetical protein	join(728544..730943,731120..731209,731240..731542,731575..731637)	Theileria orientalis strain Shintoku	20715530
TOT_030000344	CDS	TOT_030000344	NC_025262.1	731670	732674	R	conserved hypothetical protein	complement(731670..732674)	Theileria orientalis strain Shintoku	20715531
TOT_030000345	CDS	TOT_030000345	NC_025262.1	732787	737770	R	conserved hypothetical protein	complement(join(732787..733113,733148..733209,733241..733287,733554..734419,734450..735113,735366..735868,735905..737482,737636..737770))	Theileria orientalis strain Shintoku	20715532
TOT_030000914	CDS	TOT_030000914	NC_025262.1	738263	742679	D	conserved hypothetical protein	join(738263..738405,738435..738729,738762..738907,738938..739067,739098..739165,739201..739294,739325..739419,739450..739673,739803..740784,740827..740962,740993..741572,741655..741947,741980..742262,742293..742468,742499..742578,742616..742679)	Theileria orientalis strain Shintoku	20716051
TOT_030000349	CDS	TOT_030000349	NC_025262.1	743006	745925	R	glucose-6-phosphate-1-dehydrogenase	complement(join(743006..744197,744403..745651,745715..745925))	Theileria orientalis strain Shintoku	20715533
TOT_030000350	CDS	TOT_030000350	NC_025262.1	746611	746910	R	hypothetical protein	complement(746611..746910)	Theileria orientalis strain Shintoku	20715534
TOT_030000351	CDS	TOT_030000351	NC_025262.1	747205	748241	R	protein of unknown function DUF410 family protein; uncharacterized protein	complement(join(747205..747441,747484..747986,748018..748085,748141..748241))	Theileria orientalis strain Shintoku	20715535
TOT_030000915	CDS	TOT_030000915	NC_025262.1	748565	751114	D	cleavage and polyadenylation specificty factor subunit	join(748565..749533,749565..749655,749685..749869,749901..750047,750247..750657,750815..751114)	Theileria orientalis strain Shintoku	20716052
TOT_030000916	CDS	TOT_030000916	NC_025262.1	751437	753011	D	cleavage and polyadenylation specificty factor subunit	join(751437..751572,751624..753011)	Theileria orientalis strain Shintoku	20716053
TOT_030000917	CDS	TOT_030000917	NC_025262.1	753267	759136	R	histone deacetylase superfamily protein; uncharacterized protein	complement(join(753267..753544,753887..755369,755410..755638,755815..755944,755976..756383,756416..756568,756667..757680,757765..759136))	Theileria orientalis strain Shintoku	20716054
TOT_030000355	CDS	TOT_030000355	NC_025262.1	759877	762018	D	hypothetical protein	759877..762018	Theileria orientalis strain Shintoku	20715536
TOT_030000356	CDS	TOT_030000356	NC_025262.1	762237	765089	R	conserved hypothetical protein	complement(762237..765089)	Theileria orientalis strain Shintoku	20715537
TOT_030000357	CDS	TOT_030000357	NC_025262.1	765273	766379	D	nucleolar protein	765273..766379	Theileria orientalis strain Shintoku	20715538
TOT_030000358	CDS	TOT_030000358	NC_025262.1	766508	766991	R	conserved hypothetical protein	complement(join(766508..766634,766742..766811,766868..766991))	Theileria orientalis strain Shintoku	20715539
TOT_030000359	CDS	TOT_030000359	NC_025262.1	767469	772418	D	P55; uncharacterized protein	join(767469..769615,769697..771027,771070..771087,771214..772418)	Theileria orientalis strain Shintoku	20715540
TOT_030000360	CDS	TOT_030000360	NC_025262.1	778574	781202	R	DNA mismatch repair protein	complement(join(778574..778748,778782..779095,779127..779214,779297..779946,780046..780307,780351..780643,780688..780822,780854..780927,780957..781043,781076..781202))	Theileria orientalis strain Shintoku	20715541
TOT_030000361	CDS	TOT_030000361	NC_025262.1	781654	784952	D	cell division cycle CDC48 homologue/transitional endoplasmic reticulum ATPase	join(781654..782430,782581..782869,783073..783357,783388..783942,784030..784098,784169..784420,784536..784851,784889..784952)	Theileria orientalis strain Shintoku	20715542
TOT_030000362	CDS	TOT_030000362	NC_025262.1	785028	787647	R	aspartyl-tRNA synthetase	complement(join(785028..785089,785265..785751,785785..786032,786145..786385,786448..786501,786572..786684,786778..786857,786937..787042,787124..787315,787413..787647))	Theileria orientalis strain Shintoku	20715543
TOT_030000363	CDS	TOT_030000363	NC_025262.1	787756	788261	R	60S ribosomal protein L34	complement(join(787756..787927,787999..788261))	Theileria orientalis strain Shintoku	20715544
TOT_030000364	CDS	TOT_030000364	NC_025262.1	788577	789363	D	conserved hypothetical protein	join(788577..788985,789020..789148,789203..789363)	Theileria orientalis strain Shintoku	20715545
TOT_030000365	CDS	TOT_030000365	NC_025262.1	789360	789863	R	hypothetical protein	complement(789360..789863)	Theileria orientalis strain Shintoku	20715546
TOT_030000366	CDS	TOT_030000366	NC_025262.1	789951	790841	D	hypothetical protein	join(789951..790024,790197..790491,790626..790841)	Theileria orientalis strain Shintoku	20715547
TOT_030000367	CDS	TOT_030000367	NC_025262.1	790967	791077	R	hypothetical protein	complement(790967..791077)	Theileria orientalis strain Shintoku	20715548
TOT_030000368	CDS	TOT_030000368	NC_025262.1	791083	796274	R	conserved hypothetical protein	complement(join(791083..791776,792745..793521,793555..793986,794038..794128,794295..794836,794957..795093,795160..795304,795365..795492,795557..795764,795803..795900,795942..796058,796125..796274))	Theileria orientalis strain Shintoku	20715549
TOT_030000369	CDS	TOT_030000369	NC_025262.1	796621	797815	D	conserved hypothetical protein	join(796621..796861,796893..797069,797107..797216,797246..797386,797504..797815)	Theileria orientalis strain Shintoku	20715550
TOT_030000370	CDS	TOT_030000370	NC_025262.1	797974	800355	R	Ssl1-like domain containing protein; uncharacterized protein	complement(join(797974..798141,798279..798363,798446..798713,798768..798859,798995..799155,799217..799399,799471..799561,799604..799751,799814..799925,800257..800355))	Theileria orientalis strain Shintoku	20715551
TOT_030000371	CDS	TOT_030000371	NC_025262.1	800499	806622	D	clathrin heavy chain	join(800499..800537,800739..800975,801005..801660,801736..802076,802253..803288,803337..805416,805558..806622)	Theileria orientalis strain Shintoku	20715552
TOT_030000372	CDS	TOT_030000372	NC_025262.1	806858	811477	R	P-type ATPase 2	complement(join(806858..807051,807289..809349,809593..810350,810423..810627,810695..811115,811208..811385,811422..811477))	Theileria orientalis strain Shintoku	20715553
TOT_030000373	CDS	TOT_030000373	NC_025262.1	812027	814559	D	DEAD-box family RNA helicase	join(812027..812111,812449..814559)	Theileria orientalis strain Shintoku	20715554
TOT_030000374	CDS	TOT_030000374	NC_025262.1	814916	815298	D	conserved hypothetical protein	join(814916..815017,815047..815298)	Theileria orientalis strain Shintoku	20715555
TOT_030000375	CDS	TOT_030000375	NC_025262.1	815417	816561	R	MED6 mediator family protein; uncharacterized protein	complement(join(815417..815544,815643..815798,815840..815930,816054..816237,816270..816351,816386..816496,816531..816561))	Theileria orientalis strain Shintoku	20715556
TOT_030000376	CDS	TOT_030000376	NC_025262.1	816797	822023	D	SUA5/yciO/yrdC, N-terminal domain containing protein; uncharacterized protein	join(816797..816846,816905..817633,817676..818166,818344..819202,819893..822023)	Theileria orientalis strain Shintoku	20715557
TOT_030000377	CDS	TOT_030000377	NC_025262.1	822225	822631	R	signal recognition particle, SRP14 subunit family protein; uncharacterized protein	complement(join(822225..822299,822382..822518,822529..822631))	Theileria orientalis strain Shintoku	20715558
TOT_030000378	CDS	TOT_030000378	NC_025262.1	822760	823124	D	hypothetical protein	join(822760..822884,822920..823124)	Theileria orientalis strain Shintoku	20715559
TOT_030000379	CDS	TOT_030000379	NC_025262.1	823277	826106	R	origin recognition complex protein 1	complement(join(823277..823726,823960..824071,824293..824383,824451..824617,824784..825235,825329..825508,825565..825728,825803..826106))	Theileria orientalis strain Shintoku	20715560
TOT_030000380	CDS	TOT_030000380	NC_025262.1	826277	826378	D	hypothetical protein	826277..826378	Theileria orientalis strain Shintoku	20715561
TOT_030000381	CDS	TOT_030000381	NC_025262.1	826943	827224	D	high-mobility-group protein	826943..827224	Theileria orientalis strain Shintoku	20715562
TOT_030000918	CDS	TOT_030000918	NC_025262.1	827724	828841	R	conserved hypothetical protein	complement(join(827724..827798,827902..827984,828044..828143,828199..828282,828314..828537,828598..828841))	Theileria orientalis strain Shintoku	20716055
TOT_030000383	CDS	TOT_030000383	NC_025262.1	829075	832809	D	protein of unknown function DUF814 domain containing protein; uncharacterized protein	join(829075..829308,829340..829558,829591..831451,831683..832112,832194..832809)	Theileria orientalis strain Shintoku	20715563
TOT_030000384	CDS	TOT_030000384	NC_025262.1	833226	839024	D	conserved hypothetical protein	833226..839024	Theileria orientalis strain Shintoku	20715564
TOT_030000385	CDS	TOT_030000385	NC_025262.1	839215	841824	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(839215..840970,841028..841824)	Theileria orientalis strain Shintoku	20715565
TOT_030000386	CDS	TOT_030000386	NC_025262.1	842005	843352	R	conserved hypothetical protein	complement(join(842005..842204,842234..842291,842342..842378,842410..842474,842592..842882,842913..842951,843350..843352))	Theileria orientalis strain Shintoku	20715566
TOT_030000387	CDS	TOT_030000387	NC_025262.1	843728	845353	D	conserved hypothetical protein	join(843728..844389,844504..845353)	Theileria orientalis strain Shintoku	20715567
TOT_030000388	CDS	TOT_030000388	NC_025262.1	845564	848285	R	adenosine monophosphate deaminase 2 (isoform L) isoform 3	complement(join(845564..845580,845903..848170,848234..848285))	Theileria orientalis strain Shintoku	20715568
TOT_030000389	CDS	TOT_030000389	NC_025262.1	849021	849674	D	conserved hypothetical protein	849021..849674	Theileria orientalis strain Shintoku	20715569
TOT_030000390	CDS	TOT_030000390	NC_025262.1	849781	852950	D	conserved hypothetical protein	join(849781..850697,850928..851665,851904..852790,852853..852950)	Theileria orientalis strain Shintoku	20715570
TOT_030000391	CDS	TOT_030000391	NC_025262.1	853156	854771	D	conserved hypothetical protein	join(853156..853814,853880..854771)	Theileria orientalis strain Shintoku	20715571
TOT_030000392	CDS	TOT_030000392	NC_025262.1	855074	857339	R	methionine aminopeptidase	complement(join(855074..855191,855266..855408,855444..855555,855700..856626,856737..856854,856886..857031,857062..857339))	Theileria orientalis strain Shintoku	20715572
TOT_030000393	CDS	TOT_030000393	NC_025262.1	858296	861514	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(858296..858878,859071..861514)	Theileria orientalis strain Shintoku	20715573
TOT_030000394	CDS	TOT_030000394	NC_025262.1	861542	861842	D	hypothetical protein	join(861542..861612,861692..861842)	Theileria orientalis strain Shintoku	20715574
TOT_030000395	CDS	TOT_030000395	NC_025262.1	861983	862957	D	conserved hypothetical protein	861983..862957	Theileria orientalis strain Shintoku	20715575
TOT_030000396	CDS	TOT_030000396	NC_025262.1	863230	865145	R	conserved hypothetical protein	complement(join(863230..863818,864021..864411,864497..865145))	Theileria orientalis strain Shintoku	20715576
TOT_030000397	CDS	TOT_030000397	NC_025262.1	865148	865652	R	conserved hypothetical protein	complement(join(865148..865271,865310..865441,865549..865652))	Theileria orientalis strain Shintoku	20715577
TOT_030000398	CDS	TOT_030000398	NC_025262.1	865819	866843	R	deaminase	complement(join(865819..866225,866283..866332,866386..866843))	Theileria orientalis strain Shintoku	20715578
TOT_030000399	CDS	TOT_030000399	NC_025262.1	867180	868603	D	conserved hypothetical protein	join(867180..867426,867458..867559,867590..867624,867657..867935,867979..868075,868106..868244,868276..868603)	Theileria orientalis strain Shintoku	20715579
TOT_030000400	CDS	TOT_030000400	NC_025262.1	868648	868752	D	hypothetical protein	868648..868752	Theileria orientalis strain Shintoku	20715580
TOT_030000401	CDS	TOT_030000401	NC_025262.1	868983	870918	D	cactin	join(868983..869282,869314..869494,869525..869733,869765..869864,869979..870070,870101..870189,870390..870918)	Theileria orientalis strain Shintoku	20715581
TOT_030000919	CDS	TOT_030000919	NC_025262.1	871018	872524	D	tetratricopeptide region domain containing protein; uncharacterized protein	join(871018..871048,871095..871203,871247..871362,871394..871473,871688..871858,872007..872336,872405..872524)	Theileria orientalis strain Shintoku	20716056
TOT_030000403	CDS	TOT_030000403	NC_025262.1	872653	876240	D	homeodomain-like containing protein	join(872653..872755,872802..872867,872952..873047,873137..873666,873817..876240)	Theileria orientalis strain Shintoku	20715582
TOT_030000404	CDS	TOT_030000404	NC_025262.1	876969	881176	R	protein of unknown function DUF726 family protein; uncharacterized protein	complement(join(876969..878578,878718..878912,879039..880738,880905..881176))	Theileria orientalis strain Shintoku	20715583
TOT_030000405	CDS	TOT_030000405	NC_025262.1	881414	882280	D	conserved hypothetical protein	join(881414..881453,881513..881948,882016..882049,882140..882280)	Theileria orientalis strain Shintoku	20715584
TOT_030000406	CDS	TOT_030000406	NC_025262.1	882594	883484	R	ubiquitin carrier protein	complement(join(882594..882691,882804..882951,883041..883110,883318..883421,883461..883484))	Theileria orientalis strain Shintoku	20715585
TOT_030000407	CDS	TOT_030000407	NC_025262.1	884249	885526	D	nucleosome assembly protein	join(884249..884297,884386..884453,884497..884637,884669..885112,885258..885314,885407..885526)	Theileria orientalis strain Shintoku	20715586
TOT_030000408	CDS	TOT_030000408	NC_025262.1	885737	886775	D	proteasome subunit	join(885737..885815,886010..886357,886482..886683,886715..886775)	Theileria orientalis strain Shintoku	20715587
TOT_030000409	CDS	TOT_030000409	NC_025262.1	886950	888337	R	proliferating cell nuclear antigen 1	complement(join(886950..887120,887278..887334,887452..887732,887798..887953,888175..888337))	Theileria orientalis strain Shintoku	20715588
TOT_030000410	CDS	TOT_030000410	NC_025262.1	888656	889227	D	protein of unknown function DUF841, eukaryotic family protein; uncharacterized protein	join(888656..888845,888883..888950,888982..889227)	Theileria orientalis strain Shintoku	20715589
TOT_030000411	CDS	TOT_030000411	NC_025262.1	889473	891514	D	DNA helicase	join(889473..889623,889772..889890,889936..890417,890539..890721,890839..891004,891075..891219,891314..891393,891452..891514)	Theileria orientalis strain Shintoku	20715590
TOT_030000412	CDS	TOT_030000412	NC_025262.1	891771	892597	R	conserved hypothetical protein	complement(join(891771..892318,892450..892597))	Theileria orientalis strain Shintoku	20715591
TOT_030000413	CDS	TOT_030000413	NC_025262.1	892792	894099	R	conserved hypothetical protein	complement(892792..894099)	Theileria orientalis strain Shintoku	20715592
TOT_030000414	CDS	TOT_030000414	NC_025262.1	894405	894620	R	conserved hypothetical protein	complement(894405..894620)	Theileria orientalis strain Shintoku	20715593
TOT_030000415	CDS	TOT_030000415	NC_025262.1	894773	897053	R	conserved hypothetical protein	complement(join(894773..894922,894954..895228,895370..897053))	Theileria orientalis strain Shintoku	20715594
TOT_030000416	CDS	TOT_030000416	NC_025262.1	897581	900265	R	conserved hypothetical protein	complement(join(897581..897906,897963..899204,899356..900265))	Theileria orientalis strain Shintoku	20715595
TOT_030000417	CDS	TOT_030000417	NC_025262.1	900953	901090	R	hypothetical protein	complement(900953..901090)	Theileria orientalis strain Shintoku	20715596
TOT_030000418	CDS	TOT_030000418	NC_025262.1	901333	902542	D	conserved hypothetical protein	join(901333..901341,902177..902284,902347..902377,902418..902542)	Theileria orientalis strain Shintoku	20715597
TOT_030000419	CDS	TOT_030000419	NC_025262.1	902746	905164	D	spliceosome-associated protein	join(902746..902829,902896..903049,903081..903217,903249..903323,903354..903850,903950..904182,904215..904273,904430..904627,904724..904784,905010..905164)	Theileria orientalis strain Shintoku	20715598
TOT_030000420	CDS	TOT_030000420	NC_025262.1	905230	906096	R	tetratricopeptide region domain containing protein; uncharacterized protein	complement(join(905230..905384,905508..905685,905725..906096))	Theileria orientalis strain Shintoku	20715599
TOT_030000421	CDS	TOT_030000421	NC_025262.1	906302	908481	D	DEAD-box family RNA helicase	join(906302..906481,906576..907231,907263..907359,907405..907684,907979..908481)	Theileria orientalis strain Shintoku	20715600
TOT_030000422	CDS	TOT_030000422	NC_025262.1	908589	910389	R	replication factor	complement(join(908589..908640,908670..908728,908974..909038,909114..909171,909261..909332,909401..909466,909530..909631,909736..909891,909915..910038,910068..910174,910255..910389))	Theileria orientalis strain Shintoku	20715601
TOT_030000423	CDS	TOT_030000423	NC_025262.1	910560	911975	R	mitochondrial carrier protein	complement(join(910560..910751,910868..910944,911008..911094,911177..911376,911438..911522,911606..911881,911963..911975))	Theileria orientalis strain Shintoku	20715602
TOT_030000424	CDS	TOT_030000424	NC_025262.1	912154	913556	D	initiation factor 2B related family protein; uncharacterized protein	join(912154..912287,912430..912760,912791..912977,913009..913556)	Theileria orientalis strain Shintoku	20715603
TOT_030000425	CDS	TOT_030000425	NC_025262.1	913716	914501	D	U3 small nucleolar ribonucleoprotein/40S ribosomal protein S4-like	join(913716..913849,913952..914059,914102..914256,914347..914501)	Theileria orientalis strain Shintoku	20715604
TOT_030000426	CDS	TOT_030000426	NC_025262.1	914925	915128	D	40S ribosomal protein S28	914925..915128	Theileria orientalis strain Shintoku	20715605
TOT_030000427	CDS	TOT_030000427	NC_025262.1	915391	917542	R	phosphatidylinositol-4-phosphate 5-kinase	complement(join(915391..915835,916163..916579,916653..916739,916798..916900,916956..917040,917131..917345,917449..917542))	Theileria orientalis strain Shintoku	20715606
TOT_030000428	CDS	TOT_030000428	NC_025262.1	917992	919158	D	nucleotide binding protein 2	join(917992..918220,918262..918865,918897..919158)	Theileria orientalis strain Shintoku	20715607
TOT_030000429	CDS	TOT_030000429	NC_025262.1	919352	921891	R	DNA primase large subunit	complement(join(919352..919479,919532..919627,919711..919801,919948..920041,920196..920218,920343..920397,920448..920500,920531..920714,920965..921161,921192..921351,921429..921570,921601..921690,921735..921891))	Theileria orientalis strain Shintoku	20715608
TOT_030000430	CDS	TOT_030000430	NC_025262.1	922085	923212	D	SPla/RYanodine receptor SPRY domain containing protein; uncharacterized protein	join(922085..922187,922230..922324,922355..922401,922434..922526,922584..922714,922745..922884,922916..923212)	Theileria orientalis strain Shintoku	20715609
TOT_030000431	CDS	TOT_030000431	NC_025262.1	923554	924437	R	dehydrodolichyl diphosphate synthase	complement(join(923554..923650,923763..923879,923950..924092,924303..924437))	Theileria orientalis strain Shintoku	20715610
TOT_030000432	CDS	TOT_030000432	NC_025262.1	924977	926895	R	protein disulphide isomerase	complement(join(924977..926188,926343..926541,926705..926895))	Theileria orientalis strain Shintoku	20715611
TOT_030000433	CDS	TOT_030000433	NC_025262.1	927646	928476	D	2OG-Fe(II) oxygenase domain containing protein; uncharacterized protein	join(927646..927984,928015..928476)	Theileria orientalis strain Shintoku	20715612
TOT_030000434	CDS	TOT_030000434	NC_025262.1	928581	928999	R	U6 snRNA-associated sm-like protein	complement(join(928581..928665,928697..928865,928969..928999))	Theileria orientalis strain Shintoku	20715613
TOT_030000435	CDS	TOT_030000435	NC_025262.1	929324	930831	R	conserved hypothetical protein	complement(join(929324..929835,929890..930174,930252..930504,930536..930683,930758..930831))	Theileria orientalis strain Shintoku	20715614
TOT_030000436	CDS	TOT_030000436	NC_025262.1	931550	934960	D	leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial family protein; uncharacterized protein	join(931550..933364,933485..933832,934058..934960)	Theileria orientalis strain Shintoku	20715615
TOT_030000437	CDS	TOT_030000437	NC_025262.1	935070	935984	R	conserved hypothetical protein	complement(join(935070..935114,935244..935434,935614..935774,935806..935984))	Theileria orientalis strain Shintoku	20715616
TOT_030000438	CDS	TOT_030000438	NC_025262.1	936505	936624	R	hypothetical protein	complement(936505..936624)	Theileria orientalis strain Shintoku	20715617
TOT_030000439	CDS	TOT_030000439	NC_025262.1	937015	939018	D	ubiquitin domain containing protein; uncharacterized protein	937015..939018	Theileria orientalis strain Shintoku	20715618
TOT_030000440	CDS	TOT_030000440	NC_025262.1	939256	940685	D	methyltransferase type 11 domain containing protein; uncharacterized protein	join(939256..939309,939376..939478,939708..939778,939858..940052,940149..940369,940411..940482,940514..940685)	Theileria orientalis strain Shintoku	20715619
TOT_030000441	CDS	TOT_030000441	NC_025262.1	940783	941511	R	mitochondrial import inner membrane translocase subunit	complement(join(940783..940865,940895..940967,940998..941191,941334..941511))	Theileria orientalis strain Shintoku	20715620
TOT_030000442	CDS	TOT_030000442	NC_025262.1	942042	944001	D	endoplasmic reticulum oxidoreductin 1 family protein; uncharacterized protein	join(942042..942748,942836..943237,943408..943555,943741..944001)	Theileria orientalis strain Shintoku	20715621
TOT_030000443	CDS	TOT_030000443	NC_025262.1	944291	948360	R	neutral sphingomyelinase	complement(join(944291..944977,945018..945060,945159..946168,946302..946555,946677..947236,947318..947808,948055..948360))	Theileria orientalis strain Shintoku	20715622
TOT_030000444	CDS	TOT_030000444	NC_025262.1	948589	949897	D	inner membrane insertion protein family; uncharacterized protein	join(948589..949627,949662..949897)	Theileria orientalis strain Shintoku	20715623
TOT_030000445	CDS	TOT_030000445	NC_025262.1	950117	950938	R	prohibitin	complement(950117..950938)	Theileria orientalis strain Shintoku	20715624
TOT_030000920	CDS	TOT_030000920	NC_025262.1	951153	953067	R	biopterin transport-related protein BT1 family protein; uncharacterized protein	complement(join(951153..951767,951798..951971,952072..952233,952304..952530,952860..953067))	Theileria orientalis strain Shintoku	20716057
TOT_030000447	CDS	TOT_030000447	NC_025262.1	953625	957023	R	conserved hypothetical protein	complement(join(953625..954054,954124..957023))	Theileria orientalis strain Shintoku	20715625
TOT_030000448	CDS	TOT_030000448	NC_025262.1	957056	957290	R	hypothetical protein	complement(join(957056..957118,957219..957290))	Theileria orientalis strain Shintoku	20715626
TOT_030000449	CDS	TOT_030000449	NC_025262.1	957726	958675	R	thioredoxin-like fold domain containing protein; uncharacterized protein	complement(join(957726..957886,957968..958051,958138..958221,958253..958402,958476..958640,958672..958675))	Theileria orientalis strain Shintoku	20715627
TOT_030000450	CDS	TOT_030000450	NC_025262.1	959829	965135	D	pentatricopeptide repeat containing protein	join(959829..962791,962891..965135)	Theileria orientalis strain Shintoku	20715628
TOT_030000451	CDS	TOT_030000451	NC_025262.1	965405	966100	D	conserved hypothetical protein	join(965405..966051,966082..966100)	Theileria orientalis strain Shintoku	20715629
TOT_030000452	CDS	TOT_030000452	NC_025262.1	966334	967299	R	RNA processing factor	complement(join(966334..966420,966510..966588,966733..967000,967191..967299))	Theileria orientalis strain Shintoku	20715630
TOT_030000453	CDS	TOT_030000453	NC_025262.1	967418	967977	R	RNA processing factor	complement(join(967418..967499,967533..967879,967945..967977))	Theileria orientalis strain Shintoku	20715631
TOT_030000454	CDS	TOT_030000454	NC_025262.1	968206	970673	R	Gaa1-like, GPI transamidase component family protein; uncharacterized protein	complement(join(968206..970540,970606..970673))	Theileria orientalis strain Shintoku	20715632
TOT_030000455	CDS	TOT_030000455	NC_025262.1	970957	971807	R	conserved hypothetical protein	complement(join(970957..971316,971386..971566,971641..971725,971768..971807))	Theileria orientalis strain Shintoku	20715633
TOT_030000456	CDS	TOT_030000456	NC_025262.1	972069	976131	D	DNA repair nuclease, XPF-type/Helicase domain containing protein; uncharacterized protein	join(972069..973771,973903..975259,975460..975581,975669..975759,975841..976131)	Theileria orientalis strain Shintoku	20715634
TOT_030000457	CDS	TOT_030000457	NC_025262.1	976287	980495	R	DEAD-box family helicase	complement(join(976287..976473,976701..976854,977047..978345,978457..978594,978739..979420,979488..980495))	Theileria orientalis strain Shintoku	20715635
TOT_030000458	CDS	TOT_030000458	NC_025262.1	980828	986712	D	conserved hypothetical protein	join(980828..981553,981596..981815,981870..981887,981948..982412,982833..983220,983428..985712,985943..986211,986455..986712)	Theileria orientalis strain Shintoku	20715636
TOT_030000459	CDS	TOT_030000459	NC_025262.1	986789	987008	D	hypothetical protein	join(986789..986912,986929..987008)	Theileria orientalis strain Shintoku	20715637
TOT_030000460	CDS	TOT_030000460	NC_025262.1	987024	988859	R	conserved hypothetical protein	complement(join(987024..987362,987616..988362,988506..988859))	Theileria orientalis strain Shintoku	20715638
TOT_030000461	CDS	TOT_030000461	NC_025262.1	989120	990358	R	conserved hypothetical protein	complement(989120..990358)	Theileria orientalis strain Shintoku	20715639
TOT_030000462	CDS	TOT_030000462	NC_025262.1	990729	991493	D	conserved hypothetical protein	join(990729..991108,991142..991493)	Theileria orientalis strain Shintoku	20715640
TOT_030000463	CDS	TOT_030000463	NC_025262.1	991612	992485	R	conserved hypothetical protein	complement(join(991612..991693,991725..991795,991868..991954,992031..992101,992143..992485))	Theileria orientalis strain Shintoku	20715641
TOT_030000464	CDS	TOT_030000464	NC_025262.1	992791	994968	D	lysine-tRNA ligase	join(992791..992910,992944..993211,993263..993434,993546..993781,993814..993915,994123..994239,994282..994418,994455..994540,994574..994700,994810..994968)	Theileria orientalis strain Shintoku	20715642
TOT_030000465	CDS	TOT_030000465	NC_025262.1	995163	995672	D	small nuclear ribonucleoprotein	join(995163..995219,995334..995423,995535..995672)	Theileria orientalis strain Shintoku	20715643
TOT_030000466	CDS	TOT_030000466	NC_025262.1	996006	999074	D	3'-5' exonuclease domain containing protein; uncharacterized protein	join(996006..997684,997882..998242,998364..998450,998523..998627,998812..998838,998871..999074)	Theileria orientalis strain Shintoku	20715644
TOT_030000467	CDS	TOT_030000467	NC_025262.1	999722	1000693	D	conserved hypothetical protein	join(999722..1000427,1000494..1000541,1000611..1000693)	Theileria orientalis strain Shintoku	20715645
TOT_030000468	CDS	TOT_030000468	NC_025262.1	1000620	1002852	R	MUS81 endonuclease homolog	complement(join(1000620..1000718,1000817..1002506,1002540..1002640,1002712..1002852))	Theileria orientalis strain Shintoku	20715646
TOT_030000921	CDS	TOT_030000921	NC_025262.1	1003453	1004603	D	syntaxin	join(1003453..1003486,1003518..1003603,1003665..1004120,1004232..1004389,1004519..1004603)	Theileria orientalis strain Shintoku	20716058
TOT_030000470	CDS	TOT_030000470	NC_025262.1	1004675	1009932	R	conserved hypothetical protein	complement(join(1004675..1004905,1004947..1005080,1005148..1005421,1005519..1005694,1005780..1005976,1006029..1006110,1006214..1006500,1006595..1006638,1006679..1007296,1007368..1007975,1008006..1008192,1008265..1008348,1008390..1008526,1008609..1008711,1008748..1009029,1009060..1009138,1009168..1009289,1009341..1009497,1009528..1009607,1009637..1009702,1009750..1009863,1009903..1009932))	Theileria orientalis strain Shintoku	20715647
TOT_030000471	CDS	TOT_030000471	NC_025262.1	1010198	1013395	D	conserved hypothetical protein	join(1010198..1011974,1012020..1012770,1012864..1013395)	Theileria orientalis strain Shintoku	20715648
TOT_030000472	CDS	TOT_030000472	NC_025262.1	1013598	1013927	R	conserved hypothetical protein	complement(1013598..1013927)	Theileria orientalis strain Shintoku	20715649
TOT_030000473	CDS	TOT_030000473	NC_025262.1	1014015	1014173	R	hypothetical protein	complement(1014015..1014173)	Theileria orientalis strain Shintoku	20715650
TOT_030000474	CDS	TOT_030000474	NC_025262.1	1014535	1019464	D	conserved hypothetical protein	join(1014535..1015905,1015969..1016985,1017109..1017611,1017798..1018457,1018742..1019072,1019245..1019311,1019394..1019464)	Theileria orientalis strain Shintoku	20715651
TOT_030000475	CDS	TOT_030000475	NC_025262.1	1019542	1021104	D	transcription factor IIIb subunit	1019542..1021104	Theileria orientalis strain Shintoku	20715652
TOT_030000476	CDS	TOT_030000476	NC_025262.1	1021694	1026685	R	ion-translocating ATPase	complement(join(1021694..1021751,1021828..1022438,1022480..1022532,1022581..1026685))	Theileria orientalis strain Shintoku	20715653
TOT_030000477	CDS	TOT_030000477	NC_025262.1	1027083	1029279	D	membrane transporter	join(1027083..1027209,1027384..1027677,1027749..1027925,1028084..1028172,1028241..1028340,1028402..1028741,1028846..1028924,1029085..1029279)	Theileria orientalis strain Shintoku	20715654
TOT_030000922	CDS	TOT_030000922	NC_025262.1	1029373	1031065	R	DEAD-box family helicase	complement(join(1029373..1029695,1030027..1031065))	Theileria orientalis strain Shintoku	20716059
TOT_030000479	CDS	TOT_030000479	NC_025262.1	1032007	1032705	D	protein of unknown function DUF1000 family protein; uncharacterized protein	join(1032007..1032348,1032475..1032705)	Theileria orientalis strain Shintoku	20715655
TOT_030000480	CDS	TOT_030000480	NC_025262.1	1032837	1033388	R	60S ribosomal protein L37a	complement(join(1032837..1032989,1033148..1033258,1033368..1033388))	Theileria orientalis strain Shintoku	20715656
TOT_030000481	CDS	TOT_030000481	NC_025262.1	1033762	1034010	R	protein translocation complex subunit gamma chain	complement(1033762..1034010)	Theileria orientalis strain Shintoku	20715657
TOT_030000482	CDS	TOT_030000482	NC_025262.1	1035076	1038461	D	sodium:neurotransmitter symporter family protein; uncharacterized protein	join(1035076..1038192,1038342..1038461)	Theileria orientalis strain Shintoku	20715658
TOT_030000483	CDS	TOT_030000483	NC_025262.1	1039364	1039966	R	conserved hypothetical protein	complement(1039364..1039966)	Theileria orientalis strain Shintoku	20715659
TOT_030000484	CDS	TOT_030000484	NC_025262.1	1041373	1041936	R	conserved hypothetical protein	complement(1041373..1041936)	Theileria orientalis strain Shintoku	20715660
TOT_030000485	CDS	TOT_030000485	NC_025262.1	1042679	1048699	R	conserved hypothetical protein	complement(1042679..1048699)	Theileria orientalis strain Shintoku	20715661
TOT_030000486	CDS	TOT_030000486	NC_025262.1	1049340	1050642	D	ATP-NAD/AcoX kinase family protein; uncharacterized protein	join(1049340..1049970,1050059..1050204,1050283..1050642)	Theileria orientalis strain Shintoku	20715662
TOT_030000487	CDS	TOT_030000487	NC_025262.1	1050768	1051406	R	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	complement(1050768..1051406)	Theileria orientalis strain Shintoku	20715663
TOT_030000488	CDS	TOT_030000488	NC_025262.1	1051606	1052174	D	conserved hypothetical protein	join(1051606..1051803,1051884..1052072,1052103..1052174)	Theileria orientalis strain Shintoku	20715664
TOT_030000489	CDS	TOT_030000489	NC_025262.1	1052334	1053629	R	conserved hypothetical protein	complement(join(1052334..1052416,1052448..1052505,1052561..1052634,1052699..1052776,1052861..1052914,1052946..1053020,1053053..1053121,1053158..1053223,1053267..1053408,1053528..1053629))	Theileria orientalis strain Shintoku	20715665
TOT_030000490	CDS	TOT_030000490	NC_025262.1	1054342	1055579	D	alpha/beta hydrolase fold-1 domain containing protein; uncharacterized protein	join(1054342..1054469,1054545..1054666,1054730..1054816,1054948..1055579)	Theileria orientalis strain Shintoku	20715666
TOT_030000491	CDS	TOT_030000491	NC_025262.1	1055941	1061385	R	conserved hypothetical protein	complement(join(1055941..1057476,1057684..1057737,1058773..1059370,1059476..1061385))	Theileria orientalis strain Shintoku	20715667
TOT_030000492	CDS	TOT_030000492	NC_025262.1	1061819	1062442	D	mitochondrial carrier protein	1061819..1062442	Theileria orientalis strain Shintoku	20715668
TOT_030000493	CDS	TOT_030000493	NC_025262.1	1063448	1063807	D	conserved hypothetical protein	join(1063448..1063564,1063598..1063807)	Theileria orientalis strain Shintoku	20715669
TOT_030000494	CDS	TOT_030000494	NC_025262.1	1064475	1065248	D	conserved hypothetical protein	join(1064475..1064632,1064674..1064758,1064792..1064878,1064910..1065181,1065215..1065248)	Theileria orientalis strain Shintoku	20715670
TOT_030000923	CDS	TOT_030000923	NC_025262.1	1065911	1067649	D	cysteine proteinase	join(1065911..1066022,1066055..1066204,1066277..1066381,1066412..1067323,1067459..1067649)	Theileria orientalis strain Shintoku	20716060
TOT_030000496	CDS	TOT_030000496	NC_025262.1	1067975	1068450	R	conserved hypothetical protein	complement(join(1067975..1068220,1068250..1068406,1068437..1068450))	Theileria orientalis strain Shintoku	20715671
TOT_030000924	CDS	TOT_030000924	NC_025262.1	1068683	1069076	R	conserved hypothetical protein	complement(join(1068683..1068760,1068794..1068955,1068990..1069076))	Theileria orientalis strain Shintoku	20716061
TOT_030000925	CDS	TOT_030000925	NC_025262.1	1069255	1069847	R	conserved hypothetical protein	complement(join(1069255..1069539,1069641..1069847))	Theileria orientalis strain Shintoku	20716062
TOT_030000926	CDS	TOT_030000926	NC_025262.1	1071020	1071389	R	conserved hypothetical protein	complement(join(1071020..1071118,1071150..1071197,1071276..1071389))	Theileria orientalis strain Shintoku	20716063
TOT_030000500	CDS	TOT_030000500	NC_025262.1	1072165	1077306	D	conserved hypothetical protein	join(1072165..1073111,1073166..1074476,1074531..1074835,1074881..1075135,1075265..1075566,1075681..1075845,1076050..1077306)	Theileria orientalis strain Shintoku	20715672
TOT_030000501	CDS	TOT_030000501	NC_025262.1	1079335	1079945	R	conserved hypothetical protein	complement(join(1079335..1079484,1079515..1079640,1079742..1079945))	Theileria orientalis strain Shintoku	20715673
TOT_030000502	CDS	TOT_030000502	NC_025262.1	1080108	1081006	D	peptidyl-prolyl cis-trans isomerase	join(1080108..1080185,1080220..1080450,1080539..1080660,1080874..1081006)	Theileria orientalis strain Shintoku	20715674
TOT_030000503	CDS	TOT_030000503	NC_025262.1	1081063	1082843	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1081063..1081210,1081478..1081606,1081677..1081760,1081919..1082715,1082835..1082843))	Theileria orientalis strain Shintoku	20715675
TOT_030000504	CDS	TOT_030000504	NC_025262.1	1083347	1085185	R	biopterin transport-related protein BT1 family protein; uncharacterized protein	complement(join(1083347..1083421,1083716..1084358,1084439..1084668,1084709..1085185))	Theileria orientalis strain Shintoku	20715676
TOT_030000505	CDS	TOT_030000505	NC_025262.1	1085486	1086953	R	biopterin transport-related protein BT1 family protein; uncharacterized protein	complement(join(1085486..1086134,1086216..1086445,1086477..1086953))	Theileria orientalis strain Shintoku	20715677
TOT_030000506	CDS	TOT_030000506	NC_025262.1	1087891	1089555	D	protein of unknown function DUF676, hydrolase-like domain containing protein; uncharacterized protein	join(1087891..1088987,1089096..1089555)	Theileria orientalis strain Shintoku	20715678
TOT_030000507	CDS	TOT_030000507	NC_025262.1	1089890	1092326	R	glucose-6-phosphate isomerase	complement(join(1089890..1090080,1090185..1090416,1090593..1090680,1090809..1091170,1091371..1091462,1091530..1091632,1091676..1092157,1092191..1092326))	Theileria orientalis strain Shintoku	20715679
TOT_030000508	CDS	TOT_030000508	NC_025262.1	1092864	1093589	D	hypothetical protein	1092864..1093589	Theileria orientalis strain Shintoku	20715680
TOT_030000509	CDS	TOT_030000509	NC_025262.1	1093639	1096092	R	conserved hypothetical protein	complement(join(1093639..1093911,1093943..1094031,1094136..1094236,1094530..1094873,1094994..1095035,1095065..1095145,1095177..1095554,1095670..1096092))	Theileria orientalis strain Shintoku	20715681
TOT_030000510	CDS	TOT_030000510	NC_025262.1	1096199	1097196	R	ER lumen protein retaining receptor 1	complement(join(1096199..1096450,1096482..1096770,1096868..1097196))	Theileria orientalis strain Shintoku	20715682
TOT_030000511	CDS	TOT_030000511	NC_025262.1	1097488	1098825	R	CTLH, C-terminal to LisH motif domain containing protein; uncharacterized protein	complement(1097488..1098825)	Theileria orientalis strain Shintoku	20715683
TOT_030000512	CDS	TOT_030000512	NC_025262.1	1099286	1100986	R	major facilitator superfamily MFS-1 protein	complement(1099286..1100986)	Theileria orientalis strain Shintoku	20715684
TOT_030000513	CDS	TOT_030000513	NC_025262.1	1101436	1102866	R	integral membrane protein family I; integral membrane protein	complement(1101436..1102866)	Theileria orientalis strain Shintoku	20715685
TOT_030000514	CDS	TOT_030000514	NC_025262.1	1103712	1105671	R	integral membrane protein family I; integral membrane protein	complement(join(1103712..1105583,1105669..1105671))	Theileria orientalis strain Shintoku	20715686
TOT_030000515	CDS	TOT_030000515	NC_025262.1	1106107	1110223	R	integral membrane protein family I; integral membrane protein	complement(join(1106107..1107815,1108375..1110223))	Theileria orientalis strain Shintoku	20715687
TOT_030000516	CDS	TOT_030000516	NC_025262.1	1110421	1111003	R	hypothetical protein	complement(join(1110421..1110521,1110886..1111003))	Theileria orientalis strain Shintoku	20715688
TOT_030000517	CDS	TOT_030000517	NC_025262.1	1111182	1112083	D	ARF/SAR superfamily protein; uncharacterized protein	join(1111182..1111344,1111449..1111525,1111595..1111688,1111754..1111901,1111963..1112083)	Theileria orientalis strain Shintoku	20715689
TOT_030000518	CDS	TOT_030000518	NC_025262.1	1115979	1116610	D	conserved hypothetical protein	join(1115979..1116500,1116569..1116610)	Theileria orientalis strain Shintoku	20715690
TOT_030000519	CDS	TOT_030000519	NC_025262.1	1116776	1117909	R	peptidyl-prolyl cis-trans isomerase	complement(join(1116776..1117481,1117511..1117654,1117686..1117909))	Theileria orientalis strain Shintoku	20715691
TOT_030000520	CDS	TOT_030000520	NC_025262.1	1118017	1118700	D	ubiquitin carrier protein	join(1118017..1118031,1118138..1118273,1118315..1118523,1118554..1118700)	Theileria orientalis strain Shintoku	20715692
TOT_030000521	CDS	TOT_030000521	NC_025262.1	1118712	1119759	D	CS domain containing protein; uncharacterized protein	join(1118712..1119426,1119503..1119759)	Theileria orientalis strain Shintoku	20715693
TOT_030000522	CDS	TOT_030000522	NC_025262.1	1119974	1122442	R	growth factor, receptor domain containing protein; uncharacterized protein	complement(join(1119974..1121227,1121288..1122442))	Theileria orientalis strain Shintoku	20715694
TOT_030000523	CDS	TOT_030000523	NC_025262.1	1122533	1123807	R	Arf GTPase activating protein family protein; uncharacterized protein	complement(join(1122533..1123105,1123193..1123654,1123688..1123807))	Theileria orientalis strain Shintoku	20715695
TOT_030000524	CDS	TOT_030000524	NC_025262.1	1124204	1125315	R	conserved hypothetical protein	complement(join(1124204..1124589,1124622..1125315))	Theileria orientalis strain Shintoku	20715696
TOT_030000927	CDS	TOT_030000927	NC_025262.1	1125722	1126345	R	50S ribosomal protein L12	complement(1125722..1126345)	Theileria orientalis strain Shintoku	20716064
TOT_030000526	CDS	TOT_030000526	NC_025262.1	1126644	1130141	R	conserved hypothetical protein	complement(join(1126644..1126951,1126983..1127164,1127195..1127420,1127520..1128061,1128162..1128248,1128285..1128394,1128438..1130141))	Theileria orientalis strain Shintoku	20715697
TOT_030000527	CDS	TOT_030000527	NC_025262.1	1130230	1131486	R	conserved hypothetical protein	complement(join(1130230..1130253,1130458..1130540,1130572..1130642,1130672..1130763,1130802..1130882,1130919..1130995,1131168..1131278,1131366..1131486))	Theileria orientalis strain Shintoku	20715698
TOT_030000528	CDS	TOT_030000528	NC_025262.1	1131703	1132305	D	CS domain containing protein; uncharacterized protein	1131703..1132305	Theileria orientalis strain Shintoku	20715699
TOT_030000529	CDS	TOT_030000529	NC_025262.1	1132324	1135619	D	heat shock protein DnaJ, N-terminal domain containing protein; uncharacterized protein	join(1132324..1132727,1132759..1133091,1133124..1133245,1133332..1133462,1133608..1133687,1133738..1133966,1134001..1134083,1134135..1134237,1134287..1134450,1134488..1134623,1135040..1135273,1135311..1135619)	Theileria orientalis strain Shintoku	20715700
TOT_030000530	CDS	TOT_030000530	NC_025262.1	1135731	1136601	D	biotin/lipoyl attachment domain containing protein; uncharacterized protein	join(1135731..1136090,1136121..1136181,1136219..1136382,1136437..1136601)	Theileria orientalis strain Shintoku	20715701
TOT_030000531	CDS	TOT_030000531	NC_025262.1	1136803	1140134	R	aldo/keto reductase family protein; uncharacterized protein	complement(join(1136803..1137012,1137085..1137127,1137251..1137327,1137400..1137542,1137609..1138017,1138050..1138155,1138315..1138402,1138433..1138503,1138532..1138634,1138763..1138938,1139011..1139130,1139162..1139367,1139398..1139549,1139579..1140134))	Theileria orientalis strain Shintoku	20715702
TOT_030000532	CDS	TOT_030000532	NC_025262.1	1140332	1141791	D	citrate synthase family protein; uncharacterized protein	join(1140332..1140452,1140492..1140692,1140774..1140876,1140923..1141026,1141057..1141298,1141334..1141452,1141623..1141791)	Theileria orientalis strain Shintoku	20715703
TOT_030000533	CDS	TOT_030000533	NC_025262.1	1142146	1143623	R	conserved hypothetical protein	complement(join(1142146..1142580,1142690..1142839,1142964..1143623))	Theileria orientalis strain Shintoku	20715704
TOT_030000534	CDS	TOT_030000534	NC_025262.1	1143751	1144983	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(1143751..1143932,1143964..1144505,1144655..1144983)	Theileria orientalis strain Shintoku	20715705
TOT_030000535	CDS	TOT_030000535	NC_025262.1	1145225	1146241	R	casein kinase	complement(1145225..1146241)	Theileria orientalis strain Shintoku	20715706
TOT_030000536	CDS	TOT_030000536	NC_025262.1	1147210	1153359	R	chromosome segregation protein	complement(join(1147210..1147896,1147954..1148111,1148143..1148317,1148700..1149019,1149063..1149135,1149351..1149458,1149505..1149578,1149610..1149670,1149753..1149876,1149915..1150039,1150290..1150581,1150616..1150705,1150785..1150888,1150918..1150999,1151032..1151212,1151229..1153232,1153272..1153359))	Theileria orientalis strain Shintoku	20715707
TOT_030000537	CDS	TOT_030000537	NC_025262.1	1153462	1154161	R	hypothetical protein	complement(join(1153462..1153742,1153774..1153915,1153985..1154050,1154081..1154161))	Theileria orientalis strain Shintoku	20715708
TOT_030000538	CDS	TOT_030000538	NC_025262.1	1154315	1156202	R	hypothetical protein	complement(join(1154315..1155383,1155413..1155582,1155615..1156202))	Theileria orientalis strain Shintoku	20715709
TOT_030000539	CDS	TOT_030000539	NC_025262.1	1156236	1157033	D	conserved hypothetical protein	1156236..1157033	Theileria orientalis strain Shintoku	20715710
TOT_030000540	CDS	TOT_030000540	NC_025262.1	1157245	1158283	D	methyltransferase-related family protein; uncharacterized protein	join(1157245..1157496,1157527..1157621,1157666..1157719,1157751..1157814,1157861..1157967,1157997..1158102,1158167..1158283)	Theileria orientalis strain Shintoku	20715711
TOT_030000928	CDS	TOT_030000928	NC_025262.1	1158333	1159205	R	elongation factor P, C-terminal domain containing protein; uncharacterized protein	complement(1158333..1159205)	Theileria orientalis strain Shintoku	20716065
TOT_030000542	CDS	TOT_030000542	NC_025262.1	1160510	1162469	D	pepsinogen	join(1160510..1160689,1160739..1161005,1161047..1161120,1161185..1161305,1161367..1161495,1161549..1161998,1162066..1162251,1162389..1162469)	Theileria orientalis strain Shintoku	20715712
TOT_030000543	CDS	TOT_030000543	NC_025262.1	1162663	1165159	R	conserved hypothetical protein	complement(join(1162663..1164395,1164461..1164780,1164813..1164886,1164944..1165034,1165068..1165159))	Theileria orientalis strain Shintoku	20715713
TOT_030000544	CDS	TOT_030000544	NC_025262.1	1165718	1166851	R	Arv1-like protein family protein; uncharacterized protein	complement(1165718..1166851)	Theileria orientalis strain Shintoku	20715714
TOT_030000545	CDS	TOT_030000545	NC_025262.1	1167052	1168349	R	peptide chain release factor 1 family protein; uncharacterized protein	complement(join(1167052..1167318,1167349..1167423,1167452..1167723,1167754..1167883,1167915..1168349))	Theileria orientalis strain Shintoku	20715715
TOT_030000546	CDS	TOT_030000546	NC_025262.1	1168721	1169483	D	ribosomal protein S6 family protein; uncharacterized protein	join(1168721..1168855,1168938..1169483)	Theileria orientalis strain Shintoku	20715716
TOT_030000547	CDS	TOT_030000547	NC_025262.1	1169733	1170332	D	UBX domain containing protein; uncharacterized protein	1169733..1170332	Theileria orientalis strain Shintoku	20715717
TOT_030000548	CDS	TOT_030000548	NC_025262.1	1170570	1170870	R	conserved hypothetical protein	complement(join(1170570..1170722,1170757..1170870))	Theileria orientalis strain Shintoku	20715718
TOT_030000549	CDS	TOT_030000549	NC_025262.1	1171357	1176523	D	conserved hypothetical protein	join(1171357..1171486,1171520..1171615,1171651..1172166,1172205..1173091,1173149..1174325,1174416..1175839,1175906..1176523)	Theileria orientalis strain Shintoku	20715719
TOT_030000550	CDS	TOT_030000550	NC_025262.1	1177263	1180557	R	protein kinase, core domain containing protein; uncharacterized protein	complement(join(1177263..1177557,1177639..1178978,1179196..1180557))	Theileria orientalis strain Shintoku	20715720
TOT_030000551	CDS	TOT_030000551	NC_025262.1	1180811	1182105	R	conserved hypothetical protein	complement(join(1180811..1181869,1181947..1182105))	Theileria orientalis strain Shintoku	20715721
TOT_030000552	CDS	TOT_030000552	NC_025262.1	1182368	1183370	D	U2 snRNP auxiliary factor	join(1182368..1182566,1182665..1182874,1182963..1183176,1183265..1183370)	Theileria orientalis strain Shintoku	20715722
TOT_030000929	CDS	TOT_030000929	NC_025262.1	1183486	1184295	D	proteasome subunit alpha type	1183486..1184295	Theileria orientalis strain Shintoku	20716066
TOT_030000554	CDS	TOT_030000554	NC_025262.1	1184724	1193271	D	Prp8 protein	join(1184724..1192470,1192736..1193271)	Theileria orientalis strain Shintoku	20715723
TOT_030000555	CDS	TOT_030000555	NC_025262.1	1193608	1194897	D	conserved hypothetical protein	join(1193608..1193851,1193965..1194363,1194394..1194452,1194484..1194646,1194815..1194897)	Theileria orientalis strain Shintoku	20715724
TOT_030000556	CDS	TOT_030000556	NC_025262.1	1195050	1196913	D	conserved hypothetical protein	join(1195050..1195406,1195445..1195730,1195762..1196156,1196230..1196913)	Theileria orientalis strain Shintoku	20715725
TOT_030000557	CDS	TOT_030000557	NC_025262.1	1197101	1198021	D	AAA ATPase, core domain containing protein; uncharacterized protein	join(1197101..1197356,1197393..1198021)	Theileria orientalis strain Shintoku	20715726
TOT_030000558	CDS	TOT_030000558	NC_025262.1	1198179	1200512	R	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	complement(join(1198179..1198554,1198621..1199290,1199357..1200038,1200264..1200512))	Theileria orientalis strain Shintoku	20715727
TOT_030000930	CDS	TOT_030000930	NC_025262.1	1200613	1206835	R	conserved hypothetical protein	complement(join(1200613..1200743,1200780..1202252,1202391..1202895,1203109..1203926,1204189..1206081,1206115..1206835))	Theileria orientalis strain Shintoku	20716067
TOT_030000560	CDS	TOT_030000560	NC_025262.1	1207701	1208289	R	conserved hypothetical protein	complement(join(1207701..1207745,1207806..1207864,1207995..1208076,1208128..1208289))	Theileria orientalis strain Shintoku	20715728
TOT_030000561	CDS	TOT_030000561	NC_025262.1	1208583	1209999	R	cysteine protease precursor TacP	complement(join(1208583..1209250,1209311..1209424,1209528..1209999))	Theileria orientalis strain Shintoku	20715729
TOT_030000562	CDS	TOT_030000562	NC_025262.1	1210466	1211891	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(1210466..1211316,1211420..1211891))	Theileria orientalis strain Shintoku	20715730
TOT_030000563	CDS	TOT_030000563	NC_025262.1	1212266	1213582	R	cysteine proteinase precursor	complement(1212266..1213582)	Theileria orientalis strain Shintoku	20715731
TOT_030000564	CDS	TOT_030000564	NC_025262.1	1214276	1215797	R	cysteine protease precursor TacP	complement(join(1214276..1215180,1215311..1215797))	Theileria orientalis strain Shintoku	20715732
TOT_030000565	CDS	TOT_030000565	NC_025262.1	1215945	1217375	R	Tocp1 variant tocp4	complement(1215945..1217375)	Theileria orientalis strain Shintoku	20715733
TOT_030000566	CDS	TOT_030000566	NC_025262.1	1217548	1217946	R	hypothetical protein	complement(join(1217548..1217685,1217755..1217946))	Theileria orientalis strain Shintoku	20715734
TOT_030000567	CDS	TOT_030000567	NC_025262.1	1218262	1220284	R	cysteine protease precursor TacP	complement(join(1218262..1219112,1219237..1219703,1220211..1220284))	Theileria orientalis strain Shintoku	20715735
TOT_030000568	CDS	TOT_030000568	NC_025262.1	1220325	1222290	R	protein synthesis factor, GTP-binding domain containing protein; uncharacterized protein	complement(join(1220325..1220815,1220880..1221840,1221874..1222290))	Theileria orientalis strain Shintoku	20715736
TOT_030000569	CDS	TOT_030000569	NC_025262.1	1222444	1222794	D	conserved hypothetical protein	join(1222444..1222508,1222586..1222680,1222709..1222794)	Theileria orientalis strain Shintoku	20715737
TOT_030000570	CDS	TOT_030000570	NC_025262.1	1222930	1223632	D	conserved hypothetical protein	join(1222930..1223116,1223155..1223235,1223268..1223632)	Theileria orientalis strain Shintoku	20715738
TOT_030000571	CDS	TOT_030000571	NC_025262.1	1224238	1226146	D	eukaryotic initiation factor	join(1224238..1224338,1224411..1224463,1224502..1224740,1224884..1225006,1225046..1225202,1225305..1225643,1225875..1226146)	Theileria orientalis strain Shintoku	20715739
TOT_030000572	CDS	TOT_030000572	NC_025262.1	1226367	1227496	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1226367..1226570,1226675..1226878,1226910..1227089,1227123..1227292,1227325..1227496))	Theileria orientalis strain Shintoku	20715740
TOT_030000573	CDS	TOT_030000573	NC_025262.1	1227787	1229482	D	conserved hypothetical protein	join(1227787..1228234,1228473..1228621,1228652..1229053,1229204..1229482)	Theileria orientalis strain Shintoku	20715741
TOT_030000574	CDS	TOT_030000574	NC_025262.1	1229502	1230233	R	conserved hypothetical protein	complement(join(1229502..1229638,1229675..1230233))	Theileria orientalis strain Shintoku	20715742
TOT_030000575	CDS	TOT_030000575	NC_025262.1	1230317	1231245	D	nucleic acid binding, OB-fold, tRNA/helicase-type domain containing protein; uncharacterized protein	join(1230317..1231097,1231160..1231245)	Theileria orientalis strain Shintoku	20715743
TOT_030000931	CDS	TOT_030000931	NC_025262.1	1231756	1234340	R	frataxin-like family protein; uncharacterized protein	complement(join(1231756..1231941,1232117..1232199,1232489..1232765,1232830..1233811,1233842..1234195,1234228..1234340))	Theileria orientalis strain Shintoku	20716068
TOT_030000577	CDS	TOT_030000577	NC_025262.1	1234466	1235766	D	50S ribosomal protein L2	join(1234466..1234499,1234598..1234704,1234781..1235164,1235195..1235283,1235343..1235575,1235609..1235766)	Theileria orientalis strain Shintoku	20715744
TOT_030000578	CDS	TOT_030000578	NC_025262.1	1235915	1240606	D	sexual stage antigen s4845 family protein; uncharacterized protein	join(1235915..1237466,1237749..1238758,1238969..1239521,1240197..1240606)	Theileria orientalis strain Shintoku	20715745
TOT_030000579	CDS	TOT_030000579	NC_025262.1	1240990	1241648	D	pre-mRNA processing factor	join(1240990..1241309,1241358..1241449,1241479..1241648)	Theileria orientalis strain Shintoku	20715746
TOT_030000580	CDS	TOT_030000580	NC_025262.1	1241988	1245197	R	conserved hypothetical protein	complement(join(1241988..1242849,1243441..1244663,1244817..1245197))	Theileria orientalis strain Shintoku	20715747
TOT_030000581	CDS	TOT_030000581	NC_025262.1	1246109	1247312	D	conserved hypothetical protein	join(1246109..1246171,1246251..1246356,1246503..1246606,1246661..1246756,1246858..1247025,1247109..1247312)	Theileria orientalis strain Shintoku	20715748
TOT_030000582	CDS	TOT_030000582	NC_025262.1	1247492	1249073	D	bifunctional nuclease	join(1247492..1247582,1247618..1248040,1248198..1248733,1248948..1249073)	Theileria orientalis strain Shintoku	20715749
TOT_030000583	CDS	TOT_030000583	NC_025262.1	1249265	1252900	R	conserved hypothetical protein	complement(1249265..1252900)	Theileria orientalis strain Shintoku	20715750
TOT_030000584	CDS	TOT_030000584	NC_025262.1	1253288	1254789	R	conserved hypothetical protein	complement(join(1253288..1253855,1253899..1253989,1254022..1254150,1254199..1254259,1254289..1254349,1254380..1254523,1254566..1254681,1254715..1254789))	Theileria orientalis strain Shintoku	20715751
TOT_030000585	CDS	TOT_030000585	NC_025262.1	1255254	1256372	D	autophagocytosis associated protein, C-terminal domain containing protein; uncharacterized protein	join(1255254..1255402,1255456..1255552,1255583..1255660,1255693..1255800,1255911..1256074,1256309..1256372)	Theileria orientalis strain Shintoku	20715752
TOT_030000586	CDS	TOT_030000586	NC_025262.1	1257146	1259854	R	cell cycle control PP-loop ATPase MesJ/YaeO family protein; uncharacterized protein	complement(join(1257146..1258564,1258634..1258730,1258806..1259854))	Theileria orientalis strain Shintoku	20715753
TOT_030000587	CDS	TOT_030000587	NC_025262.1	1260378	1262535	D	conserved hypothetical protein	join(1260378..1261499,1261716..1261803,1261835..1262122,1262255..1262396,1262448..1262535)	Theileria orientalis strain Shintoku	20715754
TOT_030000588	CDS	TOT_030000588	NC_025262.1	1262614	1264202	D	nuclear transport factor 2 domain containing protein; uncharacterized protein	join(1262614..1263633,1263864..1264202)	Theileria orientalis strain Shintoku	20715755
TOT_030000589	CDS	TOT_030000589	NC_025262.1	1264465	1266018	D	conserved hypothetical protein	join(1264465..1264699,1264823..1264962,1265158..1265379,1265457..1265607,1265675..1265762,1265842..1265893,1265920..1266018)	Theileria orientalis strain Shintoku	20715756
TOT_030000590	CDS	TOT_030000590	NC_025262.1	1266358	1267682	R	protein of unknown function, ATP binding family protein; uncharacterized protein	complement(join(1266358..1266656,1266854..1266878,1266945..1267360,1267493..1267682))	Theileria orientalis strain Shintoku	20715757
TOT_030000591	CDS	TOT_030000591	NC_025262.1	1268675	1269916	D	conserved hypothetical protein	1268675..1269916	Theileria orientalis strain Shintoku	20715758
TOT_030000592	CDS	TOT_030000592	NC_025262.1	1270129	1271423	D	transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal domain containing protein; uncharacterized protein	join(1270129..1270174,1270224..1270310,1270336..1271056,1271216..1271423)	Theileria orientalis strain Shintoku	20715759
TOT_030000593	CDS	TOT_030000593	NC_025262.1	1271610	1273835	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(1271610..1272077,1272114..1272696,1272787..1273835))	Theileria orientalis strain Shintoku	20715760
TOT_030000594	CDS	TOT_030000594	NC_025262.1	1274180	1276323	D	conserved hypothetical protein	join(1274180..1274374,1274410..1274543,1274587..1274906,1274948..1275025,1275122..1275300,1275382..1275657,1275853..1276323)	Theileria orientalis strain Shintoku	20715761
TOT_030000595	CDS	TOT_030000595	NC_025262.1	1276532	1277899	R	GRASP55/65 family protein; uncharacterized protein	complement(join(1276532..1277664,1277733..1277771,1277863..1277899))	Theileria orientalis strain Shintoku	20715762
TOT_030000932	CDS	TOT_030000932	NC_025262.1	1278208	1279588	D	0; Conserved hypothetical protein	join(1278208..1278322,1278411..1279588)	Theileria orientalis strain Shintoku	20716069
TOT_030000933	CDS	TOT_030000933	NC_025262.1	1280333	1282102	D	0; Conserved hypothetical protein	join(1280333..1280403,1280494..1281157,1281407..1282102)	Theileria orientalis strain Shintoku	20716070
TOT_030000934	CDS	TOT_030000934	NC_025262.1	1282399	1284219	R	mannosyltransferase, PIG-V family protein; uncharacterized protein	complement(1282399..1284219)	Theileria orientalis strain Shintoku	20716071
TOT_030000598	CDS	TOT_030000598	NC_025262.1	1284453	1288928	D	conserved hypothetical protein	join(1284453..1284888,1284946..1285013,1285045..1285160,1285253..1286490,1286587..1287033,1287097..1287338,1287390..1287620,1287657..1288600,1288778..1288928)	Theileria orientalis strain Shintoku	20715763
TOT_030000599	CDS	TOT_030000599	NC_025262.1	1289018	1290640	R	conserved hypothetical protein	complement(join(1289018..1289118,1289316..1289469,1289556..1290004,1290115..1290640))	Theileria orientalis strain Shintoku	20715764
TOT_030000935	CDS	TOT_030000935	NC_025262.1	1291495	1292083	R	Box C/D snoRNA protein	complement(join(1291495..1291750,1291788..1292083))	Theileria orientalis strain Shintoku	20716072
TOT_030000601	CDS	TOT_030000601	NC_025262.1	1292184	1297067	R	adenylyl cyclase class-3/4/guanylyl cyclase domain containing protein; uncharacterized protein	complement(join(1292184..1293395,1293543..1293763,1293830..1294291,1294394..1295046,1295131..1296287,1296444..1297067))	Theileria orientalis strain Shintoku	20715765
TOT_030000602	CDS	TOT_030000602	NC_025262.1	1297367	1299659	R	conserved hypothetical protein	complement(join(1297367..1298338,1298505..1299125,1299187..1299349,1299439..1299503,1299537..1299659))	Theileria orientalis strain Shintoku	20715766
TOT_030000603	CDS	TOT_030000603	NC_025262.1	1299884	1300475	D	hypothetical protein	join(1299884..1300049,1300118..1300397,1300445..1300475)	Theileria orientalis strain Shintoku	20715767
TOT_030000604	CDS	TOT_030000604	NC_025262.1	1300538	1302058	R	polyprenyl synthetase family protein; uncharacterized protein	complement(join(1300538..1300792,1300912..1301057,1301162..1301279,1301339..1301589,1301623..1301927,1301982..1302058))	Theileria orientalis strain Shintoku	20715768
TOT_030000605	CDS	TOT_030000605	NC_025262.1	1302291	1302806	D	cyclic nucleotide-binding domain containing protein; uncharacterized protein	1302291..1302806	Theileria orientalis strain Shintoku	20715769
TOT_030000606	CDS	TOT_030000606	NC_025262.1	1303244	1310119	D	actin-binding FH2 domain containing protein; uncharacterized protein	join(1303244..1303401,1303600..1305387,1305508..1306273,1306409..1308078,1308214..1308340,1308767..1309168,1309439..1310119)	Theileria orientalis strain Shintoku	20715770
TOT_030000607	CDS	TOT_030000607	NC_025262.1	1310480	1310932	D	hypothetical protein	1310480..1310932	Theileria orientalis strain Shintoku	20715771
TOT_030000608	CDS	TOT_030000608	NC_025262.1	1311061	1314694	R	DNA replication licensing factor	complement(join(1311061..1311259,1311417..1311577,1311822..1312450,1312656..1312857,1312890..1313001,1313057..1313237,1313344..1313444,1313615..1313703,1313730..1313762,1313807..1313987,1314020..1314108,1314200..1314331,1314363..1314422,1314533..1314694))	Theileria orientalis strain Shintoku	20715772
TOT_030000609	CDS	TOT_030000609	NC_025262.1	1315662	1319140	D	protein of unknown function DUF900, hydrolase-like family protein; uncharacterized protein	join(1315662..1315857,1316014..1317220,1317389..1317851,1317999..1318502,1318534..1318847,1319014..1319140)	Theileria orientalis strain Shintoku	20715773
TOT_030000610	CDS	TOT_030000610	NC_025262.1	1320252	1324049	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1320252..1320577,1320754..1320755,1321834..1324049)	Theileria orientalis strain Shintoku	20715774
TOT_030000611	CDS	TOT_030000611	NC_025262.1	1324614	1325453	D	conserved hypothetical protein	join(1324614..1325279,1325358..1325453)	Theileria orientalis strain Shintoku	20715775
TOT_030000612	CDS	TOT_030000612	NC_025262.1	1325775	1328006	D	SJCHGC04543 protein; uncharacterized protein	join(1325775..1325873,1325957..1326094,1326179..1326239,1326403..1326785,1326853..1326986,1327044..1327104,1327219..1327299,1327502..1327660,1327711..1327778,1327868..1328006)	Theileria orientalis strain Shintoku	20715776
TOT_030000613	CDS	TOT_030000613	NC_025262.1	1328348	1330088	D	seryl-tRNA synthetase	join(1328348..1328900,1328988..1329335,1329385..1330088)	Theileria orientalis strain Shintoku	20715777
TOT_030000614	CDS	TOT_030000614	NC_025262.1	1330258	1331997	R	RNA 3'-terminal phosphate cyclase	complement(join(1330258..1330703,1330791..1330801,1331009..1331682,1331869..1331997))	Theileria orientalis strain Shintoku	20715778
TOT_030000615	CDS	TOT_030000615	NC_025262.1	1332339	1334909	D	succinate dehydrogenase subunit	join(1332339..1332402,1332560..1332733,1332833..1333192,1333203..1334651,1334797..1334909)	Theileria orientalis strain Shintoku	20715779
TOT_030000616	CDS	TOT_030000616	NC_025262.1	1334999	1335787	R	50S ribosomal protein L27	complement(join(1334999..1335186,1335384..1335538,1335675..1335787))	Theileria orientalis strain Shintoku	20715780
TOT_030000617	CDS	TOT_030000617	NC_025262.1	1335963	1337785	D	dihydrolipoyl dehydrogenase	join(1335963..1336027,1336204..1336378,1336417..1336857,1336938..1337055,1337121..1337785)	Theileria orientalis strain Shintoku	20715781
TOT_030000618	CDS	TOT_030000618	NC_025262.1	1338416	1353579	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1338416..1342885,1342907..1343196,1343215..1343562,1345533..1347494,1348310..1348319,1351095..1351127,1351669..1351703,1351729..1351753,1352018..1353480,1353519..1353579))	Theileria orientalis strain Shintoku	20715782
TOT_030000619	CDS	TOT_030000619	NC_025262.1	1354552	1355484	R	sulfur metabolism negative regulator	complement(join(1354552..1354728,1354909..1354974,1355094..1355236,1355376..1355484))	Theileria orientalis strain Shintoku	20715783
TOT_030000620	CDS	TOT_030000620	NC_025262.1	1356177	1357430	R	conserved hypothetical protein	complement(join(1356177..1356331,1356666..1356785,1356941..1357430))	Theileria orientalis strain Shintoku	20715784
TOT_030000621	CDS	TOT_030000621	NC_025262.1	1357968	1358365	R	prefoldin domain containing protein; uncharacterized protein	complement(join(1357968..1358021,1358102..1358227,1358333..1358365))	Theileria orientalis strain Shintoku	20715785
TOT_030000622	CDS	TOT_030000622	NC_025262.1	1358679	1359566	R	60S ribosomal protein L24	complement(join(1358679..1358777,1358882..1359159,1359251..1359382,1359521..1359566))	Theileria orientalis strain Shintoku	20715786
TOT_030000623	CDS	TOT_030000623	NC_025262.1	1359933	1362074	D	mRNA splicing factor SYF2 family protein; uncharacterized protein	join(1359933..1360071,1360138..1360362,1360486..1361046,1361122..1361289,1361344..1361411,1361570..1361685,1361765..1362074)	Theileria orientalis strain Shintoku	20715787
TOT_030000624	CDS	TOT_030000624	NC_025262.1	1362286	1364055	R	conserved hypothetical protein	complement(1362286..1364055)	Theileria orientalis strain Shintoku	20715788
TOT_030000625	CDS	TOT_030000625	NC_025262.1	1364459	1364847	D	hypothetical protein	join(1364459..1364575,1364770..1364847)	Theileria orientalis strain Shintoku	20715789
TOT_030000626	CDS	TOT_030000626	NC_025262.1	1365004	1366578	R	hypothetical protein	complement(1365004..1366578)	Theileria orientalis strain Shintoku	20715790
TOT_030000627	CDS	TOT_030000627	NC_025262.1	1366982	1367370	D	hypothetical protein	join(1366982..1367098,1367293..1367370)	Theileria orientalis strain Shintoku	20715791
TOT_030000628	CDS	TOT_030000628	NC_025262.1	1367527	1369389	R	hypothetical protein	complement(1367527..1369389)	Theileria orientalis strain Shintoku	20715792
TOT_030000629	CDS	TOT_030000629	NC_025262.1	1369793	1369918	D	hypothetical protein	1369793..1369918	Theileria orientalis strain Shintoku	20715793
TOT_030000630	CDS	TOT_030000630	NC_025262.1	1373417	1376702	D	inosine-5'-monophosphate dehydrogenase	join(1373417..1373498,1373703..1373841,1374033..1374194,1374287..1374526,1374890..1374976,1375078..1375222,1375310..1375417,1375729..1375857,1376274..1376702)	Theileria orientalis strain Shintoku	20715794
TOT_030000631	CDS	TOT_030000631	NC_025262.1	1377586	1380558	R	conserved hypothetical protein	complement(1377586..1380558)	Theileria orientalis strain Shintoku	20715795
TOT_030000632	CDS	TOT_030000632	NC_025262.1	1380990	1382450	R	hypothetical protein	complement(join(1380990..1381318,1381606..1381672,1381947..1382450))	Theileria orientalis strain Shintoku	20715796
TOT_030000633	CDS	TOT_030000633	NC_025262.1	1383023	1385119	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(1383023..1383388,1383506..1383702,1383818..1383880,1383971..1384175,1384262..1384371,1384488..1384785,1384823..1385119))	Theileria orientalis strain Shintoku	20715797
TOT_030000634	CDS	TOT_030000634	NC_025262.1	1385543	1387468	R	U box domain containing protein; uncharacterized protein	complement(join(1385543..1385721,1385832..1386350,1386553..1386903,1386974..1387261,1387303..1387468))	Theileria orientalis strain Shintoku	20715798
TOT_030000635	CDS	TOT_030000635	NC_025262.1	1388347	1389548	D	conserved hypothetical protein	join(1388347..1388362,1388456..1388893,1389031..1389212,1389351..1389548)	Theileria orientalis strain Shintoku	20715799
TOT_030000636	CDS	TOT_030000636	NC_025262.1	1389966	1391300	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1389966..1391300	Theileria orientalis strain Shintoku	20715800
TOT_030000637	CDS	TOT_030000637	NC_025262.1	1391557	1395921	R	splicing factor subunit	complement(join(1391557..1391691,1391788..1392092,1392279..1393143,1393223..1393605,1393637..1393897,1394187..1395062,1395259..1395465,1395528..1395921))	Theileria orientalis strain Shintoku	20715801
TOT_030000936	CDS	TOT_030000936	NC_025262.1	1396346	1396785	R	conserved hypothetical protein	complement(join(1396346..1396483,1396609..1396785))	Theileria orientalis strain Shintoku	20716073
TOT_030000639	CDS	TOT_030000639	NC_025262.1	1397009	1399829	D	T-complex protein 1 subunit	join(1397009..1397138,1397393..1397572,1397694..1397835,1397964..1398300,1398392..1398728,1398759..1398908,1398970..1399829)	Theileria orientalis strain Shintoku	20715802
TOT_030000640	CDS	TOT_030000640	NC_025262.1	1400186	1401429	R	conserved hypothetical protein	complement(join(1400186..1400464,1400476..1400609,1400727..1401064,1401095..1401429))	Theileria orientalis strain Shintoku	20715803
TOT_030000641	CDS	TOT_030000641	NC_025262.1	1401636	1402715	D	DUF455 domain containing protein; uncharacterized protein	1401636..1402715	Theileria orientalis strain Shintoku	20715804
TOT_030000642	CDS	TOT_030000642	NC_025262.1	1402798	1405776	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1402798..1405285,1405337..1405776)	Theileria orientalis strain Shintoku	20715805
TOT_030000643	CDS	TOT_030000643	NC_025262.1	1406253	1406840	D	conserved hypothetical protein	1406253..1406840	Theileria orientalis strain Shintoku	20715806
TOT_030000644	CDS	TOT_030000644	NC_025262.1	1408201	1412808	D	ABC transporter related domain containing protein; uncharacterized protein	join(1408201..1408688,1408791..1409210,1409244..1412808)	Theileria orientalis strain Shintoku	20715807
TOT_030000645	CDS	TOT_030000645	NC_025262.1	1413250	1414650	R	conserved hypothetical protein	complement(1413250..1414650)	Theileria orientalis strain Shintoku	20715808
TOT_030000646	CDS	TOT_030000646	NC_025262.1	1415845	1418719	R	chaperonin CPN60	complement(join(1415845..1416098,1416267..1416386,1416613..1416971,1417217..1417431,1417465..1417664,1417825..1418719))	Theileria orientalis strain Shintoku	20715809
TOT_030000647	CDS	TOT_030000647	NC_025262.1	1419169	1421448	D	DNA polymerase, beta-like region domain containing protein; uncharacterized protein	join(1419169..1419523,1419582..1419687,1419735..1419908,1420012..1420093,1420128..1420202,1420422..1420675,1420710..1420853,1421067..1421448)	Theileria orientalis strain Shintoku	20715810
TOT_030000648	CDS	TOT_030000648	NC_025262.1	1421586	1423400	R	thioredoxin-like fold domain containing protein; uncharacterized protein	complement(join(1421586..1421921,1422042..1422212,1422362..1422646,1422722..1422929,1422960..1423096,1423161..1423400))	Theileria orientalis strain Shintoku	20715811
TOT_030000649	CDS	TOT_030000649	NC_025262.1	1423608	1427161	D	Fasciclin-2-like protein	join(1423608..1423974,1424033..1424135,1424188..1424394,1424460..1424547,1424657..1424881,1425194..1426157,1426269..1426558,1426937..1427161)	Theileria orientalis strain Shintoku	20715812
TOT_030000650	CDS	TOT_030000650	NC_025262.1	1427343	1434121	D	DNA polymerase	join(1427343..1427438,1427525..1427657,1427738..1428162,1428275..1428398,1428484..1428711,1428745..1429037,1429270..1429485,1429537..1429740,1429888..1430091,1430144..1430353,1430466..1430536,1430705..1430805,1431115..1431594,1431627..1431895,1432088..1432171,1432258..1432379,1432452..1433131,1433358..1433527,1433645..1434121)	Theileria orientalis strain Shintoku	20715813
TOT_030000937	CDS	TOT_030000937	NC_025262.1	1434213	1436169	D	snRNP splicing factor U2AF	join(1434213..1434537,1434698..1435261,1435340..1435846,1435961..1436169)	Theileria orientalis strain Shintoku	20716074
TOT_030000652	CDS	TOT_030000652	NC_025262.1	1436401	1439357	D	phospholipase	join(1436401..1438677,1438797..1438949,1439220..1439357)	Theileria orientalis strain Shintoku	20715814
TOT_030000653	CDS	TOT_030000653	NC_025262.1	1439427	1441702	R	DNA-directed RNA polymerase D subunit	complement(join(1439427..1439817,1440079..1441019,1441120..1441167,1441204..1441298,1441331..1441583,1441646..1441702))	Theileria orientalis strain Shintoku	20715815
TOT_030000654	CDS	TOT_030000654	NC_025262.1	1442555	1444666	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1442555..1444666	Theileria orientalis strain Shintoku	20715816
TOT_030000655	CDS	TOT_030000655	NC_025262.1	1444805	1444950	R	hypothetical protein	complement(join(1444805..1444837,1444867..1444950))	Theileria orientalis strain Shintoku	20715817
TOT_030000656	CDS	TOT_030000656	NC_025262.1	1445037	1446939	D	conserved hypothetical protein	join(1445037..1445069,1445107..1446939)	Theileria orientalis strain Shintoku	20715818
TOT_030000657	CDS	TOT_030000657	NC_025262.1	1447198	1449501	D	conserved hypothetical protein	1447198..1449501	Theileria orientalis strain Shintoku	20715819
TOT_030000658	CDS	TOT_030000658	NC_025262.1	1449988	1452999	R	ATP-dependent RNA helicase	complement(join(1449988..1452072,1452146..1452194,1452257..1452999))	Theileria orientalis strain Shintoku	20715820
TOT_030000659	CDS	TOT_030000659	NC_025262.1	1453267	1456713	D	translation initiation factor	join(1453267..1454235,1454401..1455486,1455530..1455868,1456084..1456146,1456198..1456450,1456586..1456713)	Theileria orientalis strain Shintoku	20715821
TOT_030000660	CDS	TOT_030000660	NC_025262.1	1456838	1457554	R	plastid 50S ribosomal protein L21 or ribosomal protein L21; plastid 50S ribosomal protein L21	complement(1456838..1457554)	Theileria orientalis strain Shintoku	20715822
TOT_030000661	CDS	TOT_030000661	NC_025262.1	1457689	1458521	R	conserved hypothetical protein	complement(join(1457689..1457763,1457810..1457874,1457950..1457989,1458022..1458075,1458141..1458172,1458298..1458365,1458409..1458521))	Theileria orientalis strain Shintoku	20715823
TOT_030000662	CDS	TOT_030000662	NC_025262.1	1458701	1459072	R	conserved hypothetical protein	complement(1458701..1459072)	Theileria orientalis strain Shintoku	20715824
TOT_030000663	CDS	TOT_030000663	NC_025262.1	1459570	1460742	D	conserved hypothetical protein	1459570..1460742	Theileria orientalis strain Shintoku	20715825
TOT_030000664	CDS	TOT_030000664	NC_025262.1	1460979	1463444	D	Band 7-related protein	join(1460979..1461171,1461238..1461321,1461359..1461488,1461795..1461968,1462064..1462199,1462238..1462291,1462421..1462555,1462598..1462699,1462733..1462925,1463245..1463444)	Theileria orientalis strain Shintoku	20715826
TOT_030000665	CDS	TOT_030000665	NC_025262.1	1463838	1468976	D	DNA-directed RNA polymerase	join(1463838..1467415,1467533..1467551,1467636..1468976)	Theileria orientalis strain Shintoku	20715827
TOT_030000938	CDS	TOT_030000938	NC_025262.1	1469876	1471662	D	protein of unknown function DUF284, transmembrane eukaryotic family protein; uncharacterized protein	join(1469876..1470410,1470441..1470727,1471069..1471339,1471414..1471482,1471514..1471662)	Theileria orientalis strain Shintoku	20716075
TOT_030000667	CDS	TOT_030000667	NC_025262.1	1472349	1475101	D	T-complex protein 1 alpha subunit	join(1472349..1472396,1472537..1472684,1472726..1472916,1472972..1473121,1473177..1473595,1473695..1473870,1474030..1474182,1474320..1474516,1474657..1474800,1474898..1475101)	Theileria orientalis strain Shintoku	20715828
TOT_030000939	CDS	TOT_030000939	NC_025262.1	1475380	1476940	D	conserved hypothetical protein	join(1475380..1476407,1476481..1476940)	Theileria orientalis strain Shintoku	20716076
TOT_030000940	CDS	TOT_030000940	NC_025262.1	1477608	1480097	D	conserved hypothetical protein	join(1477608..1478987,1479066..1479405,1479547..1479896,1479933..1480097)	Theileria orientalis strain Shintoku	20716077
TOT_030000670	CDS	TOT_030000670	NC_025262.1	1480608	1481725	D	conserved hypothetical protein	join(1480608..1480790,1480898..1481009,1481097..1481725)	Theileria orientalis strain Shintoku	20715829
TOT_030000671	CDS	TOT_030000671	NC_025262.1	1482011	1482169	D	hypothetical protein	1482011..1482169	Theileria orientalis strain Shintoku	20715830
TOT_030000672	CDS	TOT_030000672	NC_025262.1	1482453	1487765	D	ankyrin repeat containing protein	join(1482453..1483110,1483162..1483379,1483485..1483533,1483666..1484512,1484597..1485090,1485256..1485447,1485718..1485960,1486197..1486322,1486421..1486706,1486806..1487064,1487275..1487434,1487512..1487765)	Theileria orientalis strain Shintoku	20715831
TOT_030000673	CDS	TOT_030000673	NC_025262.1	1488103	1489105	D	DNA-binding SAP domain containing protein; uncharacterized protein	join(1488103..1488213,1488308..1488551,1488592..1488865,1488949..1489003,1489037..1489105)	Theileria orientalis strain Shintoku	20715832
TOT_030000674	CDS	TOT_030000674	NC_025262.1	1489514	1490264	R	adenylyl-cyclase-associated protein	complement(join(1489514..1490004,1490255..1490264))	Theileria orientalis strain Shintoku	20715833
TOT_030000675	CDS	TOT_030000675	NC_025262.1	1490635	1491790	R	conserved hypothetical protein	complement(join(1490635..1490885,1491052..1491790))	Theileria orientalis strain Shintoku	20715834
TOT_030000676	CDS	TOT_030000676	NC_025262.1	1492368	1493834	D	conserved hypothetical protein	join(1492368..1492549,1492644..1492766,1492847..1492966,1493077..1493220,1493334..1493467,1493618..1493699,1493732..1493834)	Theileria orientalis strain Shintoku	20715835
TOT_030000677	CDS	TOT_030000677	NC_025262.1	1494008	1498185	R	ribosomal RNA methyltransferase RrmJ/FtsJ domain containing protein; uncharacterized protein	complement(join(1494008..1494124,1494198..1494390,1494664..1494968,1495001..1495138,1495280..1496418,1496577..1496830,1496973..1497061,1497097..1497167,1497198..1497350,1497409..1497622,1497718..1497868,1498004..1498185))	Theileria orientalis strain Shintoku	20715836
TOT_030000678	CDS	TOT_030000678	NC_025262.1	1498656	1501642	D	Os09g0397900 protein; uncharacterized protein	join(1498656..1498947,1498978..1499119,1499151..1499217,1499260..1499512,1499545..1499711,1499887..1500241,1500305..1500392,1500448..1500550,1500597..1500686,1500892..1500993,1501067..1501322,1501437..1501642)	Theileria orientalis strain Shintoku	20715837
TOT_030000679	CDS	TOT_030000679	NC_025262.1	1502060	1510587	R	conserved hypothetical protein	complement(join(1502060..1502726,1502904..1503824,1504014..1505140,1505375..1505705,1505763..1506195,1506241..1506554,1506606..1507286,1507449..1507499,1507593..1508825,1508967..1509072,1509169..1509503,1509555..1509990,1510089..1510587))	Theileria orientalis strain Shintoku	20715838
TOT_030000941	CDS	TOT_030000941	NC_025262.1	1510779	1511498	R	conserved hypothetical protein	complement(1510779..1511498)	Theileria orientalis strain Shintoku	20716078
TOT_030000680	CDS	TOT_030000680	NC_025262.1	1511801	1521201	R	conserved hypothetical protein	complement(join(1511801..1512426,1512508..1512670,1512782..1514381,1514445..1514608,1514786..1514977,1515023..1515816,1516108..1518033,1518240..1518875,1519063..1520154,1520225..1520279,1520521..1520738,1520771..1520833,1520991..1521201))	Theileria orientalis strain Shintoku	20715839
TOT_030000681	CDS	TOT_030000681	NC_025262.1	1521338	1529834	R	ABC transporter	complement(join(1521338..1521507,1521671..1521800,1521833..1522000,1522117..1522171,1522252..1523083,1523944..1524259,1524346..1524829,1524951..1525054,1525219..1525544,1525702..1526429,1526850..1527117,1527318..1528997,1529231..1529834))	Theileria orientalis strain Shintoku	20715840
TOT_030000682	CDS	TOT_030000682	NC_025262.1	1530925	1533182	D	iron hydrogenase, large subunit, C-terminal domain containing protein; uncharacterized protein	join(1530925..1531764,1531945..1532068,1532120..1532559,1532694..1533182)	Theileria orientalis strain Shintoku	20715841
TOT_030000683	CDS	TOT_030000683	NC_025262.1	1533239	1533298	R	hypothetical protein	complement(1533239..1533298)	Theileria orientalis strain Shintoku	20715842
TOT_030000684	CDS	TOT_030000684	NC_025262.1	1533669	1535327	R	conserved hypothetical protein	complement(join(1533669..1534498,1534613..1535327))	Theileria orientalis strain Shintoku	20715843
TOT_030000685	CDS	TOT_030000685	NC_025262.1	1536042	1536437	R	hypothetical protein	complement(1536042..1536437)	Theileria orientalis strain Shintoku	20715844
TOT_030000686	CDS	TOT_030000686	NC_025262.1	1536943	1537479	R	60S ribosomal protein L19	complement(1536943..1537479)	Theileria orientalis strain Shintoku	20715845
TOT_030000687	CDS	TOT_030000687	NC_025262.1	1537995	1539741	D	endonuclease III	join(1537995..1538109,1538244..1538779,1538994..1539353,1539408..1539532,1539597..1539741)	Theileria orientalis strain Shintoku	20715846
TOT_030000688	CDS	TOT_030000688	NC_025262.1	1540039	1541477	R	conserved hypothetical protein	complement(join(1540039..1540095,1540275..1540579,1540670..1541477))	Theileria orientalis strain Shintoku	20715847
TOT_030000689	CDS	TOT_030000689	NC_025262.1	1541817	1542107	D	hypothetical protein	1541817..1542107	Theileria orientalis strain Shintoku	20715848
TOT_030000690	CDS	TOT_030000690	NC_025262.1	1542407	1544044	D	adenosylhomocysteinase	join(1542407..1542746,1542915..1544044)	Theileria orientalis strain Shintoku	20715849
TOT_030000691	CDS	TOT_030000691	NC_025262.1	1544338	1545510	D	conserved hypothetical protein	1544338..1545510	Theileria orientalis strain Shintoku	20715850
TOT_030000692	CDS	TOT_030000692	NC_025262.1	1545761	1547506	D	conserved hypothetical protein	join(1545761..1546455,1546632..1546805,1546902..1547064,1547105..1547305,1547387..1547506)	Theileria orientalis strain Shintoku	20715851
TOT_030000693	CDS	TOT_030000693	NC_025262.1	1547718	1550327	R	conserved hypothetical protein	complement(join(1547718..1547792,1547871..1548016,1548108..1548189,1548389..1548458,1548524..1548647,1548718..1549047,1549290..1549350,1549371..1549452,1549487..1549585,1549617..1549691,1549724..1549866,1549899..1550327))	Theileria orientalis strain Shintoku	20715852
TOT_030000694	CDS	TOT_030000694	NC_025262.1	1550623	1551491	D	conserved hypothetical protein	join(1550623..1550683,1550729..1550783,1550818..1550930,1550963..1551057,1551087..1551353,1551408..1551491)	Theileria orientalis strain Shintoku	20715853
TOT_030000695	CDS	TOT_030000695	NC_025262.1	1551639	1552181	R	conserved hypothetical protein	complement(join(1551639..1551824,1551855..1552181))	Theileria orientalis strain Shintoku	20715854
TOT_030000696	CDS	TOT_030000696	NC_025262.1	1552613	1556281	R	conserved hypothetical protein	complement(join(1552613..1553239,1553948..1556093,1556217..1556281))	Theileria orientalis strain Shintoku	20715855
TOT_030000697	CDS	TOT_030000697	NC_025262.1	1556650	1557060	R	histone H3	complement(1556650..1557060)	Theileria orientalis strain Shintoku	20715856
TOT_030000698	CDS	TOT_030000698	NC_025262.1	1557172	1557509	D	hypothetical protein	join(1557172..1557337,1557445..1557509)	Theileria orientalis strain Shintoku	20715857
TOT_030000699	CDS	TOT_030000699	NC_025262.1	1557748	1558332	R	conserved hypothetical protein	complement(1557748..1558332)	Theileria orientalis strain Shintoku	20715858
TOT_030000700	CDS	TOT_030000700	NC_025262.1	1558782	1559404	R	conserved hypothetical protein	complement(join(1558782..1558865,1558964..1559086,1559121..1559300,1559378..1559404))	Theileria orientalis strain Shintoku	20715859
TOT_030000701	CDS	TOT_030000701	NC_025262.1	1559840	1561834	R	conserved hypothetical protein	complement(1559840..1561834)	Theileria orientalis strain Shintoku	20715860
TOT_030000702	CDS	TOT_030000702	NC_025262.1	1562318	1566355	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1562318..1563147,1563313..1566355))	Theileria orientalis strain Shintoku	20715861
TOT_030000942	CDS	TOT_030000942	NC_025262.1	1566663	1568138	R	conserved hypothetical protein	complement(1566663..1568138)	Theileria orientalis strain Shintoku	20716079
TOT_030000943	CDS	TOT_030000943	NC_025262.1	1568498	1571588	R	alpha adaptin	complement(join(1568498..1568588,1568620..1568711,1568814..1569876,1570001..1570068,1570101..1570367,1570398..1571588))	Theileria orientalis strain Shintoku	20716080
TOT_030000705	CDS	TOT_030000705	NC_025262.1	1572538	1572892	R	synaptobrevin	complement(join(1572538..1572642,1572676..1572748,1572780..1572892))	Theileria orientalis strain Shintoku	20715862
TOT_030000706	CDS	TOT_030000706	NC_025262.1	1573193	1579284	R	conserved hypothetical protein	complement(join(1573193..1573929,1574155..1574713,1574972..1575780,1575835..1576148,1576209..1577511,1577683..1578771,1578864..1579284))	Theileria orientalis strain Shintoku	20715863
TOT_030000707	CDS	TOT_030000707	NC_025262.1	1579441	1581748	R	pancreatic ribonuclease family protein; uncharacterized protein	complement(join(1579441..1581524,1581598..1581748))	Theileria orientalis strain Shintoku	20715864
TOT_030000708	CDS	TOT_030000708	NC_025262.1	1581869	1583416	D	arsenical pump-driving ATPase	join(1581869..1582039,1582071..1582178,1582190..1582371,1582461..1582713,1582814..1583038,1583138..1583234,1583319..1583416)	Theileria orientalis strain Shintoku	20715865
TOT_030000709	CDS	TOT_030000709	NC_025262.1	1583841	1585694	R	Armadillo-like helical domain containing protein; uncharacterized protein	complement(join(1583841..1583954,1584057..1584193,1584286..1584411,1584503..1584557,1584632..1584705,1584836..1584935,1584985..1585005,1585500..1585694))	Theileria orientalis strain Shintoku	20715866
TOT_030000710	CDS	TOT_030000710	NC_025262.1	1585855	1587777	R	protein kinase	complement(1585855..1587777)	Theileria orientalis strain Shintoku	20715867
TOT_030000711	CDS	TOT_030000711	NC_025262.1	1587886	1590493	R	conserved hypothetical protein	complement(join(1587886..1588026,1588188..1588273,1588414..1588777,1588962..1589005,1589036..1589453,1589665..1589738,1589832..1590057,1590167..1590291,1590382..1590493))	Theileria orientalis strain Shintoku	20715868
TOT_030000712	CDS	TOT_030000712	NC_025262.1	1591084	1594216	R	methionyl-tRNA synthetase	complement(join(1591084..1593517,1593555..1593891,1593967..1594216))	Theileria orientalis strain Shintoku	20715869
TOT_030000713	CDS	TOT_030000713	NC_025262.1	1594538	1595089	R	conserved hypothetical protein	complement(1594538..1595089)	Theileria orientalis strain Shintoku	20715870
TOT_030000714	CDS	TOT_030000714	NC_025262.1	1595302	1596653	R	hypothetical protein	complement(join(1595302..1595399,1595667..1595780,1595967..1596242,1596641..1596653))	Theileria orientalis strain Shintoku	20715871
TOT_030000944	CDS	TOT_030000944	NC_025262.1	1596950	1597634	R	zinc finger, SWIM-type domain containing protein; uncharacterized protein	complement(join(1596950..1597090,1597148..1597194,1597263..1597439,1597556..1597634))	Theileria orientalis strain Shintoku	20716081
TOT_030000716	CDS	TOT_030000716	NC_025262.1	1597758	1597982	D	hypothetical protein	1597758..1597982	Theileria orientalis strain Shintoku	20715872
TOT_030000717	CDS	TOT_030000717	NC_025262.1	1598088	1600586	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1598088..1598297,1598349..1600586))	Theileria orientalis strain Shintoku	20715873
TOT_030000718	CDS	TOT_030000718	NC_025262.1	1601189	1606024	R	conserved hypothetical protein	complement(join(1601189..1601428,1601687..1605923,1606008..1606024))	Theileria orientalis strain Shintoku	20715874
TOT_030000719	CDS	TOT_030000719	NC_025262.1	1606574	1606870	R	conserved hypothetical protein	complement(join(1606574..1606825,1606850..1606870))	Theileria orientalis strain Shintoku	20715875
TOT_030000720	CDS	TOT_030000720	NC_025262.1	1607033	1607683	R	conserved hypothetical protein	complement(join(1607033..1607247,1607332..1607683))	Theileria orientalis strain Shintoku	20715876
TOT_030000721	CDS	TOT_030000721	NC_025262.1	1607949	1608898	D	ribosomal protein L18	join(1607949..1608161,1608233..1608470,1608622..1608742,1608838..1608898)	Theileria orientalis strain Shintoku	20715877
TOT_030000722	CDS	TOT_030000722	NC_025262.1	1609138	1612443	D	conserved hypothetical protein	join(1609138..1612163,1612272..1612443)	Theileria orientalis strain Shintoku	20715878
TOT_030000723	CDS	TOT_030000723	NC_025262.1	1612740	1613011	R	hypothetical protein	complement(join(1612740..1612829,1612934..1613011))	Theileria orientalis strain Shintoku	20715879
TOT_030000724	CDS	TOT_030000724	NC_025262.1	1613127	1615367	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1613127..1615367)	Theileria orientalis strain Shintoku	20715880
TOT_030000725	CDS	TOT_030000725	NC_025262.1	1616018	1616125	D	hypothetical protein	1616018..1616125	Theileria orientalis strain Shintoku	20715881
TOT_030000727	CDS	TOT_030000727	NC_025262.1	1616412	1618587	R	Sec1-like protein family protein; uncharacterized protein	complement(join(1616412..1618369,1618560..1618587))	Theileria orientalis strain Shintoku	20715882
TOT_030000728	CDS	TOT_030000728	NC_025262.1	1619302	1621666	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1619302..1619374,1619409..1621666))	Theileria orientalis strain Shintoku	20715883
TOT_030000729	CDS	TOT_030000729	NC_025262.1	1621911	1624347	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1621911..1622013,1622390..1624347))	Theileria orientalis strain Shintoku	20715884
TOT_030000730	CDS	TOT_030000730	NC_025262.1	1625015	1626508	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1625015..1626508)	Theileria orientalis strain Shintoku	20715885
TOT_030000731	CDS	TOT_030000731	NC_025262.1	1628101	1629711	R	conserved hypothetical protein	complement(1628101..1629711)	Theileria orientalis strain Shintoku	20715886
TOT_030000732	CDS	TOT_030000732	NC_025262.1	1629862	1632981	R	protein of unknown function DUF1222 family protein; uncharacterized protein	complement(1629862..1632981)	Theileria orientalis strain Shintoku	20715887
TOT_030000733	CDS	TOT_030000733	NC_025262.1	1634107	1637187	D	thioredoxin reductase	join(1634107..1634293,1634384..1634721,1634836..1634973,1635067..1635197,1635357..1635423,1635600..1635746,1635845..1635926,1636003..1636187,1636277..1636357,1636458..1636554,1636919..1637187)	Theileria orientalis strain Shintoku	20715888
TOT_030000734	CDS	TOT_030000734	NC_025262.1	1637770	1640716	D	conserved hypothetical protein	join(1637770..1638169,1638351..1639338,1639564..1639801,1639991..1640247,1640320..1640507,1640619..1640716)	Theileria orientalis strain Shintoku	20715889
TOT_030000735	CDS	TOT_030000735	NC_025262.1	1640856	1641366	D	hypothetical protein	join(1640856..1640990,1641133..1641366)	Theileria orientalis strain Shintoku	20715890
TOT_030000736	CDS	TOT_030000736	NC_025262.1	1641780	1643366	D	conserved hypothetical protein	1641780..1643366	Theileria orientalis strain Shintoku	20715891
TOT_030000737	CDS	TOT_030000737	NC_025262.1	1644225	1647404	R	conserved hypothetical protein	complement(join(1644225..1644622,1645578..1645665,1645809..1646249,1646289..1646498,1646639..1646756,1646893..1647131,1647240..1647404))	Theileria orientalis strain Shintoku	20715892
TOT_030000738	CDS	TOT_030000738	NC_025262.1	1648116	1648640	D	nucleotide excision repair, TFIIH, subunit TTDA family protein; uncharacterized protein	join(1648116..1648150,1648297..1648411,1648542..1648640)	Theileria orientalis strain Shintoku	20715893
TOT_030000945	CDS	TOT_030000945	NC_025262.1	1648831	1649939	R	ADP-ribosylation factor	complement(join(1648831..1648968,1649151..1649231,1649313..1649475,1649621..1649731,1649875..1649939))	Theileria orientalis strain Shintoku	20716082
TOT_030000740	CDS	TOT_030000740	NC_025262.1	1650468	1654039	R	conserved hypothetical protein	complement(join(1650468..1652837,1653096..1653649,1653844..1654039))	Theileria orientalis strain Shintoku	20715894
TOT_030000741	CDS	TOT_030000741	NC_025262.1	1654484	1660327	D	conserved hypothetical protein	join(1654484..1655320,1655436..1655468,1655566..1655787,1655870..1657391,1657545..1657901,1658115..1658221,1658360..1658993,1659168..1660327)	Theileria orientalis strain Shintoku	20715895
TOT_030000742	CDS	TOT_030000742	NC_025262.1	1660591	1661012	R	conserved hypothetical protein	complement(join(1660591..1660757,1660790..1661012))	Theileria orientalis strain Shintoku	20715896
TOT_030000743	CDS	TOT_030000743	NC_025262.1	1661101	1661274	R	hypothetical protein	complement(1661101..1661274)	Theileria orientalis strain Shintoku	20715897
TOT_030000744	CDS	TOT_030000744	NC_025262.1	1661661	1664198	R	conserved hypothetical protein	complement(join(1661661..1663247,1663335..1664198))	Theileria orientalis strain Shintoku	20715898
TOT_030000946	CDS	TOT_030000946	NC_025262.1	1664630	1666716	D	conserved hypothetical protein	join(1664630..1665646,1665734..1665862,1665951..1666246,1666288..1666368,1666512..1666716)	Theileria orientalis strain Shintoku	20716083
TOT_030000746	CDS	TOT_030000746	NC_025262.1	1666805	1668024	R	hypothetical protein	complement(join(1666805..1666819,1666837..1668024))	Theileria orientalis strain Shintoku	20715899
TOT_030000747	CDS	TOT_030000747	NC_025262.1	1668181	1672489	R	2-oxoglutarate dehydrogenase E1 component	complement(join(1668181..1668952,1669074..1669134,1669284..1669826,1669928..1670399,1670463..1670530,1670704..1671010,1671122..1671320,1671402..1671691,1671780..1671922,1671995..1672058,1672280..1672489))	Theileria orientalis strain Shintoku	20715900
TOT_030000748	CDS	TOT_030000748	NC_025262.1	1673521	1673964	D	hypothetical protein	1673521..1673964	Theileria orientalis strain Shintoku	20715901
TOT_030000749	CDS	TOT_030000749	NC_025262.1	1679153	1680247	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1679153..1680247	Theileria orientalis strain Shintoku	20715902
TOT_030000750	CDS	TOT_030000750	NC_025262.1	1680532	1682541	R	hypothetical protein	complement(join(1680532..1680607,1680836..1682541))	Theileria orientalis strain Shintoku	20715903
TOT_030000751	CDS	TOT_030000751	NC_025262.1	1683822	1685399	R	hypothetical protein	complement(1683822..1685399)	Theileria orientalis strain Shintoku	20715904
TOT_030000752	CDS	TOT_030000752	NC_025262.1	1686344	1687966	R	conserved hypothetical protein	complement(1686344..1687966)	Theileria orientalis strain Shintoku	20715905
TOT_030000753	CDS	TOT_030000753	NC_025262.1	1688830	1690494	R	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	complement(join(1688830..1689757,1689791..1689972,1690004..1690117,1690198..1690347,1690381..1690494))	Theileria orientalis strain Shintoku	20715906
TOT_030000754	CDS	TOT_030000754	NC_025262.1	1690619	1691176	D	conserved hypothetical protein	join(1690619..1690705,1690748..1690884,1690916..1691005,1691128..1691176)	Theileria orientalis strain Shintoku	20715907
TOT_030000755	CDS	TOT_030000755	NC_025262.1	1692062	1693359	D	cellular retinaldehyde-binding/triple function, C-terminal domain containing protein; uncharacterized protein	join(1692062..1692190,1692333..1692647,1692865..1693359)	Theileria orientalis strain Shintoku	20715908
TOT_030000756	CDS	TOT_030000756	NC_025262.1	1693889	1700700	D	SNF2-related domain containing protein; uncharacterized protein	join(1693889..1694165,1694268..1694572,1694759..1694905,1695692..1696762,1697058..1697150,1697311..1697671,1697710..1697803,1697863..1697959,1698082..1698331,1698351..1698478,1698543..1698687,1698939..1699194,1699277..1699518,1699784..1700137,1700303..1700700)	Theileria orientalis strain Shintoku	20715909
TOT_030000757	CDS	TOT_030000757	NC_025262.1	1700826	1701314	R	conserved hypothetical protein	complement(1700826..1701314)	Theileria orientalis strain Shintoku	20715910
TOT_030000758	CDS	TOT_030000758	NC_025262.1	1701677	1701883	D	hypothetical protein	1701677..1701883	Theileria orientalis strain Shintoku	20715911
TOT_030000759	CDS	TOT_030000759	NC_025262.1	1701985	1703235	R	transcription elongation factor S-II, central region domain containing protein; uncharacterized protein	complement(1701985..1703235)	Theileria orientalis strain Shintoku	20715912
TOT_030000760	CDS	TOT_030000760	NC_025262.1	1703972	1704702	D	conserved hypothetical protein	join(1703972..1704265,1704457..1704702)	Theileria orientalis strain Shintoku	20715913
TOT_030000761	CDS	TOT_030000761	NC_025262.1	1705209	1708469	R	hypothetical protein	complement(1705209..1708469)	Theileria orientalis strain Shintoku	20715914
TOT_030000762	CDS	TOT_030000762	NC_025262.1	1709955	1712384	R	hypothetical protein	complement(join(1709955..1712164,1712339..1712384))	Theileria orientalis strain Shintoku	20715915
TOT_030000763	CDS	TOT_030000763	NC_025262.1	1713067	1714815	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1713067..1714815	Theileria orientalis strain Shintoku	20715916
TOT_030000764	CDS	TOT_030000764	NC_025262.1	1715080	1718188	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(1715080..1716578,1716720..1717071,1717154..1718188))	Theileria orientalis strain Shintoku	20715917
TOT_030000765	CDS	TOT_030000765	NC_025262.1	1718571	1719846	D	conserved hypothetical protein	join(1718571..1718647,1718726..1718798,1718881..1718937,1718999..1719063,1719302..1719583,1719708..1719846)	Theileria orientalis strain Shintoku	20715918
TOT_030000766	CDS	TOT_030000766	NC_025262.1	1719958	1721370	D	4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	join(1719958..1720098,1720291..1720494,1720670..1720880,1721087..1721229,1721311..1721370)	Theileria orientalis strain Shintoku	20715919
TOT_030000767	CDS	TOT_030000767	NC_025262.1	1721374	1727744	D	4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme	join(1721374..1726965,1727199..1727306,1727622..1727744)	Theileria orientalis strain Shintoku	20715920
TOT_030000947	CDS	TOT_030000947	NC_025262.1	1727618	1728236	R	conserved hypothetical protein	complement(join(1727618..1727947,1728156..1728236))	Theileria orientalis strain Shintoku	20716084
TOT_030000948	CDS	TOT_030000948	NC_025262.1	1728438	1730387	R	RhoGAP domain containing protein; uncharacterized protein	complement(join(1728438..1728758,1728936..1729735,1729817..1730043,1730269..1730387))	Theileria orientalis strain Shintoku	20716085
TOT_030000770	CDS	TOT_030000770	NC_025262.1	1730709	1733192	R	immunoglobulin-like fold domain containing protein; uncharacterized protein	complement(join(1730709..1730967,1731044..1731360,1731512..1731634,1732062..1732137,1732270..1732316,1732347..1732381,1732516..1732578,1732681..1732753,1732866..1733033,1733067..1733192))	Theileria orientalis strain Shintoku	20715921
TOT_030000771	CDS	TOT_030000771	NC_025262.1	1734228	1738834	D	conserved hypothetical protein	join(1734228..1736908,1737104..1737589,1737776..1738129,1738273..1738438,1738518..1738657,1738669..1738834)	Theileria orientalis strain Shintoku	20715922
TOT_030000772	CDS	TOT_030000772	NC_025262.1	1739055	1742458	D	cytochrome reductase	join(1739055..1739103,1739307..1739440,1739506..1739613,1739801..1739952,1740117..1740274,1740431..1740588,1740688..1740759,1740950..1740998,1741072..1741166,1741277..1741552,1741707..1741791,1741882..1742061,1742097..1742329,1742366..1742458)	Theileria orientalis strain Shintoku	20715923
TOT_030000773	CDS	TOT_030000773	NC_025262.1	1742889	1744059	R	conserved hypothetical protein	complement(join(1742889..1743251,1743399..1743814,1743873..1744059))	Theileria orientalis strain Shintoku	20715924
TOT_030000774	CDS	TOT_030000774	NC_025262.1	1744368	1745024	R	cyclin-dependent kinase, regulatory subunit family protein; uncharacterized protein	complement(1744368..1745024)	Theileria orientalis strain Shintoku	20715925
TOT_030000775	CDS	TOT_030000775	NC_025262.1	1745818	1746671	R	predicted protein	complement(join(1745818..1745931,1745965..1746052,1746117..1746223,1746455..1746541,1746615..1746671))	Theileria orientalis strain Shintoku	20715926
TOT_030000776	CDS	TOT_030000776	NC_025262.1	1746792	1747774	D	Os01g0259600 protein; uncharacterized protein	join(1746792..1747030,1747106..1747215,1747251..1747356,1747387..1747635,1747666..1747774)	Theileria orientalis strain Shintoku	20715927
TOT_030000777	CDS	TOT_030000777	NC_025262.1	1747969	1749201	R	protein of unknown function DUF572 family protein; uncharacterized protein	complement(join(1747969..1748631,1748767..1749201))	Theileria orientalis strain Shintoku	20715928
TOT_030000778	CDS	TOT_030000778	NC_025262.1	1749500	1751980	R	glutamate-cysteine ligase catalytic subunit family protein; uncharacterized protein	complement(1749500..1751980)	Theileria orientalis strain Shintoku	20715929
TOT_030000779	CDS	TOT_030000779	NC_025262.1	1752238	1754817	R	glutamate-cysteine ligase catalytic subunit family protein; uncharacterized protein	complement(1752238..1754817)	Theileria orientalis strain Shintoku	20715930
TOT_030000780	CDS	TOT_030000780	NC_025262.1	1755221	1756543	D	conserved hypothetical protein	1755221..1756543	Theileria orientalis strain Shintoku	20715931
TOT_030000781	CDS	TOT_030000781	NC_025262.1	1756617	1759731	D	conserved hypothetical protein	join(1756617..1757625,1757728..1758605,1758803..1758903,1759039..1759144,1759254..1759394,1759543..1759731)	Theileria orientalis strain Shintoku	20715932
TOT_030000783	CDS	TOT_030000783	NC_025262.1	1761152	1764169	R	conserved hypothetical protein	complement(join(1761152..1762870,1762922..1763775,1764013..1764169))	Theileria orientalis strain Shintoku	20715933
TOT_030000784	CDS	TOT_030000784	NC_025262.1	1764436	1770336	D	fumarate hydratase class I	join(1764436..1764926,1764958..1765089,1765189..1765354,1765568..1765801,1765971..1766076,1766493..1766552,1766597..1766665,1766823..1767371,1768354..1768652,1769092..1769973,1770172..1770336)	Theileria orientalis strain Shintoku	20715934
TOT_030000785	CDS	TOT_030000785	NC_025262.1	1770746	1775365	R	conserved hypothetical protein	complement(join(1770746..1770813,1771187..1772060,1772586..1775219,1775231..1775365))	Theileria orientalis strain Shintoku	20715935
TOT_030000786	CDS	TOT_030000786	NC_025262.1	1775452	1778198	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1775452..1775571,1775813..1778175,1778189..1778198))	Theileria orientalis strain Shintoku	20715936
TOT_030000949	CDS	TOT_030000949	NC_025262.1	1779616	1780002	D	CS domain containing protein; uncharacterized protein	1779616..1780002	Theileria orientalis strain Shintoku	20716086
TOT_030000788	CDS	TOT_030000788	NC_025262.1	1779999	1780756	R	conserved hypothetical protein	complement(join(1779999..1780049,1780090..1780268,1780300..1780363,1780394..1780438,1780491..1780607,1780667..1780756))	Theileria orientalis strain Shintoku	20715937
TOT_030000789	CDS	TOT_030000789	NC_025262.1	1781175	1782382	D	conserved hypothetical protein	join(1781175..1781268,1781300..1782197,1782280..1782382)	Theileria orientalis strain Shintoku	20715938
TOT_030000790	CDS	TOT_030000790	NC_025262.1	1782909	1783484	R	conserved hypothetical protein	complement(1782909..1783484)	Theileria orientalis strain Shintoku	20715939
TOT_030000791	CDS	TOT_030000791	NC_025262.1	1783923	1784504	R	conserved hypothetical protein	complement(1783923..1784504)	Theileria orientalis strain Shintoku	20715940
TOT_030000792	CDS	TOT_030000792	NC_025262.1	1785148	1785756	D	thioesterase superfamily domain containing protein; uncharacterized protein	1785148..1785756	Theileria orientalis strain Shintoku	20715941
TOT_030000793	CDS	TOT_030000793	NC_025262.1	1786052	1789147	R	conserved hypothetical protein	complement(join(1786052..1786111,1786142..1786213,1786340..1786433,1786573..1786860,1786932..1787038,1787242..1787345,1787484..1787613,1787705..1787865,1788123..1788308,1788492..1788609,1788761..1788845,1789134..1789147))	Theileria orientalis strain Shintoku	20715942
TOT_030000950	CDS	TOT_030000950	NC_025262.1	1789227	1790126	R	conserved hypothetical protein	complement(join(1789227..1789895,1789935..1790126))	Theileria orientalis strain Shintoku	20716087
TOT_030000795	CDS	TOT_030000795	NC_025262.1	1790611	1791417	R	CCR4-NOT transcription complex subunit 3	complement(join(1790611..1790669,1790743..1790896,1791001..1791232,1791350..1791417))	Theileria orientalis strain Shintoku	20715943
TOT_030000796	CDS	TOT_030000796	NC_025262.1	1791523	1791900	R	conserved hypothetical protein	complement(join(1791523..1791613,1791730..1791815,1791889..1791900))	Theileria orientalis strain Shintoku	20715944
TOT_030000797	CDS	TOT_030000797	NC_025262.1	1792207	1792664	R	Alba, DNA/RNA-binding protein family protein; uncharacterized protein	complement(join(1792207..1792298,1792339..1792501,1792599..1792664))	Theileria orientalis strain Shintoku	20715945
TOT_030000798	CDS	TOT_030000798	NC_025262.1	1793070	1795892	R	RAP domain containing protein; uncharacterized protein	complement(join(1793070..1793156,1793190..1793245,1793283..1793324,1793358..1793445,1793535..1793714,1793802..1793897,1793915..1794460,1794491..1794613,1794751..1794941,1794973..1795113,1795202..1795403,1795437..1795485,1795546..1795654,1795766..1795892))	Theileria orientalis strain Shintoku	20715946
TOT_030000799	CDS	TOT_030000799	NC_025262.1	1795999	1798989	D	cysteinyl-tRNA synthetase	join(1795999..1796226,1796264..1796455,1796485..1796558,1796584..1796903,1797168..1797453,1797617..1797800,1797968..1798126,1798228..1798335,1798368..1798522,1798610..1798673,1798804..1798989)	Theileria orientalis strain Shintoku	20715947
TOT_030000800	CDS	TOT_030000800	NC_025262.1	1799298	1800711	R	conserved hypothetical protein	complement(join(1799298..1800259,1800291..1800711))	Theileria orientalis strain Shintoku	20715948
TOT_030000801	CDS	TOT_030000801	NC_025262.1	1802876	1809483	D	conserved hypothetical protein	join(1802876..1809426,1809438..1809483)	Theileria orientalis strain Shintoku	20715949
TOT_030000802	CDS	TOT_030000802	NC_025262.1	1810581	1812163	D	hexose transporter	join(1810581..1812005,1812065..1812163)	Theileria orientalis strain Shintoku	20715950
TOT_030000803	CDS	TOT_030000803	NC_025262.1	1812718	1814127	D	hexose transporter	1812718..1814127	Theileria orientalis strain Shintoku	20715951
TOT_030000804	CDS	TOT_030000804	NC_025262.1	1814360	1818167	R	protein of unknown function DUF663 domain containing protein; uncharacterized protein	complement(join(1814360..1814632,1814747..1815175,1815224..1815333,1815387..1815466,1815526..1815633,1815977..1816589,1816791..1817110,1817204..1817671,1817710..1818167))	Theileria orientalis strain Shintoku	20715952
TOT_030000805	CDS	TOT_030000805	NC_025262.1	1818452	1818889	R	conserved hypothetical protein	complement(1818452..1818889)	Theileria orientalis strain Shintoku	20715953
TOT_030000806	CDS	TOT_030000806	NC_025262.1	1819304	1823980	R	predicted protein	complement(join(1819304..1820360,1820496..1821419,1821564..1821805,1821869..1822193,1822287..1822949,1823049..1823980))	Theileria orientalis strain Shintoku	20715954
TOT_030000807	CDS	TOT_030000807	NC_025262.1	1824421	1825390	R	centrin	complement(join(1824421..1824507,1824538..1824597,1824629..1824709,1824841..1824927,1825032..1825099,1825246..1825390))	Theileria orientalis strain Shintoku	20715955
TOT_030000808	CDS	TOT_030000808	NC_025262.1	1825798	1826997	R	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	complement(join(1825798..1826894,1826982..1826997))	Theileria orientalis strain Shintoku	20715956
TOT_030000809	CDS	TOT_030000809	NC_025262.1	1827556	1829679	D	aspartyl protease precursor	join(1827556..1828002,1828109..1828161,1828235..1828359,1828428..1828467,1828501..1828657,1828689..1828741,1828807..1828892,1829025..1829498,1829519..1829679)	Theileria orientalis strain Shintoku	20715957
TOT_030000810	CDS	TOT_030000810	NC_025262.1	1829886	1832130	D	conserved hypothetical protein	join(1829886..1830344,1830504..1830605,1830855..1831630,1831764..1832130)	Theileria orientalis strain Shintoku	20715958
TOT_030000811	CDS	TOT_030000811	NC_025262.1	1832654	1833517	D	conserved hypothetical protein	1832654..1833517	Theileria orientalis strain Shintoku	20715959
TOT_030000812	CDS	TOT_030000812	NC_025262.1	1834159	1834852	D	DNA-binding TFAR19-related protein family protein; uncharacterized protein	join(1834159..1834206,1834237..1834265,1834313..1834377,1834424..1834485,1834516..1834572,1834745..1834783,1834814..1834852)	Theileria orientalis strain Shintoku	20715960
TOT_030000813	CDS	TOT_030000813	NC_025262.1	1835494	1835913	D	40S ribosomal protein S27	join(1835494..1835660,1835832..1835913)	Theileria orientalis strain Shintoku	20715961
TOT_030000888	CDS	TOT_030000888	NC_025262.1	1836406	1837232	D	conserved hypothetical protein	join(1836406..1836469,1836574..1836836,1837002..1837232)	Theileria orientalis strain Shintoku	20716025
TOT_030000815	CDS	TOT_030000815	NC_025262.1	1837808	1839513	R	hypothetical protein	complement(join(1837808..1839452,1839461..1839513))	Theileria orientalis strain Shintoku	20715962
TOT_030000816	CDS	TOT_030000816	NC_025262.1	1839701	1839973	D	hypothetical protein	join(1839701..1839763,1839893..1839973)	Theileria orientalis strain Shintoku	20715963
TOT_030000817	CDS	TOT_030000817	NC_025262.1	1843016	1843701	R	60S ribosomal protein L24	complement(join(1843016..1843141,1843255..1843407,1843522..1843701))	Theileria orientalis strain Shintoku	20715964
TOT_030000818	CDS	TOT_030000818	NC_025262.1	1844331	1845422	R	hydrolase, NUDIX family protein; uncharacterized protein	complement(join(1844331..1844553,1844629..1845422))	Theileria orientalis strain Shintoku	20715965
TOT_030000951	CDS	TOT_030000951	NC_025262.1	1846278	1853720	R	carbamoyl phosphate synthase II	complement(join(1846278..1846645,1846731..1846998,1847176..1847713,1848102..1848351,1848587..1848883,1849140..1849468,1849553..1850451,1850500..1850510,1850710..1850988,1851080..1851336,1851602..1851786,1851957..1852096,1852251..1852650,1852714..1852986,1853062..1853343,1853481..1853720))	Theileria orientalis strain Shintoku	20716088
TOT_030000820	CDS	TOT_030000820	NC_025262.1	1854359	1854543	D	hypothetical protein	join(1854359..1854449,1854479..1854543)	Theileria orientalis strain Shintoku	20715966
TOT_030000952	CDS	TOT_030000952	NC_025262.1	1854684	1854842	R	hypothetical protein	complement(1854684..1854842)	Theileria orientalis strain Shintoku	20716089
TOT_030000822	CDS	TOT_030000822	NC_025262.1	1855575	1857282	D	glycogen synthase kinase	join(1855575..1855715,1855827..1856412,1856599..1856899,1857051..1857282)	Theileria orientalis strain Shintoku	20715967
TOT_030000953	CDS	TOT_030000953	NC_025262.1	1857568	1859072	R	26S proteasome regulatory subunit	complement(join(1857568..1857707,1858004..1858052,1858155..1858312,1858428..1858653,1858797..1859072))	Theileria orientalis strain Shintoku	20716090
TOT_030000824	CDS	TOT_030000824	NC_025262.1	1859108	1859324	D	hypothetical protein	join(1859108..1859201,1859284..1859324)	Theileria orientalis strain Shintoku	20715968
TOT_030000825	CDS	TOT_030000825	NC_025262.1	1859364	1861874	R	conserved hypothetical protein	complement(join(1859364..1859572,1859964..1860371,1860582..1860806,1860981..1861589,1861856..1861874))	Theileria orientalis strain Shintoku	20715969
TOT_030000826	CDS	TOT_030000826	NC_025262.1	1862396	1863511	D	WD40 repeat-like domain containing protein; uncharacterized protein	1862396..1863511	Theileria orientalis strain Shintoku	20715970
TOT_030000827	CDS	TOT_030000827	NC_025262.1	1865588	1868059	R	hypothetical protein	complement(join(1865588..1867688,1867769..1867844,1867924..1868059))	Theileria orientalis strain Shintoku	20715971
TOT_030000828	CDS	TOT_030000828	NC_025262.1	1868979	1870956	R	conserved hypothetical protein	complement(join(1868979..1869312,1869409..1869539,1869612..1869929,1870082..1870234,1870294..1870351,1870449..1870636,1870849..1870956))	Theileria orientalis strain Shintoku	20715972
TOT_030000829	CDS	TOT_030000829	NC_025262.1	1871983	1873848	D	hypothetical protein	join(1871983..1873244,1873344..1873848)	Theileria orientalis strain Shintoku	20715973
TOT_030000830	CDS	TOT_030000830	NC_025262.1	1873904	1874224	R	hypothetical protein	complement(1873904..1874224)	Theileria orientalis strain Shintoku	20715974
TOT_030000831	CDS	TOT_030000831	NC_025262.1	1875023	1875789	R	conserved hypothetical protein	complement(join(1875023..1875149,1875230..1875789))	Theileria orientalis strain Shintoku	20715975
TOT_030000832	CDS	TOT_030000832	NC_025262.1	1877128	1879407	D	conserved hypothetical protein	1877128..1879407	Theileria orientalis strain Shintoku	20715976
TOT_030000833	CDS	TOT_030000833	NC_025262.1	1879625	1880055	D	hypothetical protein	join(1879625..1879695,1879938..1880055)	Theileria orientalis strain Shintoku	20715977
TOT_030000834	CDS	TOT_030000834	NC_025262.1	1880074	1883018	D	S1, RNA binding domain containing protein; uncharacterized protein	join(1880074..1880797,1880928..1881808,1882076..1882141,1882259..1882349,1882459..1882621,1882716..1882796,1882901..1883018)	Theileria orientalis strain Shintoku	20715978
TOT_030000835	CDS	TOT_030000835	NC_025262.1	1883437	1883984	R	hypothetical protein	complement(join(1883437..1883498,1883637..1883681,1883786..1883984))	Theileria orientalis strain Shintoku	20715979
TOT_030000836	CDS	TOT_030000836	NC_025262.1	1884302	1884640	R	hypothetical protein	complement(1884302..1884640)	Theileria orientalis strain Shintoku	20715980
TOT_030000837	CDS	TOT_030000837	NC_025262.1	1885218	1886713	R	U1 snRNP protein	complement(join(1885218..1885254,1885347..1885528,1885676..1886713))	Theileria orientalis strain Shintoku	20715981
TOT_030000838	CDS	TOT_030000838	NC_025262.1	1887090	1889031	D	RED-like, N-terminal domain containing protein; uncharacterized protein	join(1887090..1887163,1887282..1887329,1887418..1887550,1887583..1887665,1887769..1887928,1888055..1888198,1888331..1888391,1888490..1888628,1888740..1888878,1889002..1889031)	Theileria orientalis strain Shintoku	20715982
TOT_030000839	CDS	TOT_030000839	NC_025262.1	1889574	1891737	D	vacuolar ATP synthase subunit H	join(1889574..1889847,1889885..1890115,1890133..1890258,1890343..1890572,1890753..1890839,1890982..1891082,1891217..1891281,1891371..1891493,1891568..1891737)	Theileria orientalis strain Shintoku	20715983
TOT_030000840	CDS	TOT_030000840	NC_025262.1	1891872	1900093	R	conserved hypothetical protein	complement(join(1891872..1891907,1891949..1900093))	Theileria orientalis strain Shintoku	20715984
TOT_030000841	CDS	TOT_030000841	NC_025262.1	1902203	1908148	D	conserved hypothetical protein	1902203..1908148	Theileria orientalis strain Shintoku	20715985
TOT_030000842	CDS	TOT_030000842	NC_025262.1	1908768	1909934	D	conserved hypothetical protein	1908768..1909934	Theileria orientalis strain Shintoku	20715986
TOT_030000843	CDS	TOT_030000843	NC_025262.1	1910095	1912115	R	conserved hypothetical protein	complement(join(1910095..1910122,1910663..1912004,1912094..1912115))	Theileria orientalis strain Shintoku	20715987
TOT_030000844	CDS	TOT_030000844	NC_025262.1	1913016	1915009	D	conserved hypothetical protein	join(1913016..1913734,1914132..1914833,1914991..1915009)	Theileria orientalis strain Shintoku	20715988
TOT_030000845	CDS	TOT_030000845	NC_025262.1	1915318	1916111	D	conserved hypothetical protein	join(1915318..1915989,1916007..1916111)	Theileria orientalis strain Shintoku	20715989
TOT_030000846	CDS	TOT_030000846	NC_025262.1	1916571	1918164	D	conserved hypothetical protein	join(1916571..1917171,1917346..1917616,1918065..1918164)	Theileria orientalis strain Shintoku	20715990
TOT_030000847	CDS	TOT_030000847	NC_025262.1	1918461	1923593	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1918461..1919880,1919935..1923593)	Theileria orientalis strain Shintoku	20715991
TOT_030000848	CDS	TOT_030000848	NC_025262.1	1923613	1923921	R	hypothetical protein	complement(join(1923613..1923721,1923851..1923921))	Theileria orientalis strain Shintoku	20715992
TOT_030000849	CDS	TOT_030000849	NC_025262.1	1924278	1925280	R	conserved hypothetical protein	complement(join(1924278..1924338,1924383..1924474,1924585..1925025,1925179..1925280))	Theileria orientalis strain Shintoku	20715993
TOT_030000850	CDS	TOT_030000850	NC_025262.1	1925320	1928068	R	conserved hypothetical protein	complement(join(1925320..1925344,1925355..1925892,1925972..1926195,1926296..1926812,1926898..1926969,1927024..1928068))	Theileria orientalis strain Shintoku	20715994
TOT_030000851	CDS	TOT_030000851	NC_025262.1	1928453	1928925	R	DNA-directed RNA polymerase II	complement(join(1928453..1928639,1928717..1928806,1928852..1928925))	Theileria orientalis strain Shintoku	20715995
TOT_030000852	CDS	TOT_030000852	NC_025262.1	1929987	1930956	D	RNA polymerase II carboxyterminal domain phosphatase	join(1929987..1930256,1930324..1930407,1930504..1930956)	Theileria orientalis strain Shintoku	20715996
TOT_030000853	CDS	TOT_030000853	NC_025262.1	1931184	1934125	D	ubiquitin-conjugating enzyme	join(1931184..1931192,1931328..1931474,1931598..1931720,1931877..1932003,1932263..1932520,1932616..1932809,1932883..1932943,1933048..1933173,1933296..1933441,1933621..1933722,1933949..1934125)	Theileria orientalis strain Shintoku	20715997
TOT_030000854	CDS	TOT_030000854	NC_025262.1	1934372	1935427	R	hypothetical protein	complement(1934372..1935427)	Theileria orientalis strain Shintoku	20715998
TOT_030000855	CDS	TOT_030000855	NC_025262.1	1936083	1937585	D	conserved hypothetical protein	1936083..1937585	Theileria orientalis strain Shintoku	20715999
TOT_030000856	CDS	TOT_030000856	NC_025262.1	1937641	1938666	R	conserved hypothetical protein	complement(1937641..1938666)	Theileria orientalis strain Shintoku	20716000
TOT_030000857	CDS	TOT_030000857	NC_025262.1	1939003	1940301	D	methyltransferase	join(1939003..1939041,1939078..1939182,1939305..1939416,1939499..1939676,1939769..1939924,1940013..1940202,1940242..1940301)	Theileria orientalis strain Shintoku	20716001
TOT_030000858	CDS	TOT_030000858	NC_025262.1	1940418	1942782	R	endonuclease	complement(join(1940418..1940486,1940517..1940582,1940648..1940684,1940795..1940884,1940984..1941051,1941123..1941195,1941227..1941397,1941469..1941518,1941550..1941606,1941636..1941667,1941738..1941942,1942035..1942556,1942621..1942782))	Theileria orientalis strain Shintoku	20716002
TOT_030000860	CDS	TOT_030000860	NC_025262.1	1943176	1945467	D	U3 small nucleolar RNA-associated protein 6 domain containing protein; uncharacterized protein	join(1943176..1943429,1943466..1945332,1945372..1945467)	Theileria orientalis strain Shintoku	20716003
TOT_030000861	CDS	TOT_030000861	NC_025262.1	1946034	1947278	D	hypothetical protein	1946034..1947278	Theileria orientalis strain Shintoku	20716004
TOT_030000862	CDS	TOT_030000862	NC_025262.1	1947364	1947793	R	conserved hypothetical protein	complement(join(1947364..1947513,1947662..1947793))	Theileria orientalis strain Shintoku	20716005
TOT_030000863	CDS	TOT_030000863	NC_025262.1	1947843	1949418	R	putative RPC10 subunit of RNA polymerases I, II, and III	complement(join(1947843..1948039,1948130..1948440,1948489..1948649,1948706..1948792,1948823..1949010,1949138..1949230,1949361..1949418))	Theileria orientalis strain Shintoku	20716006
TOT_030000954	CDS	TOT_030000954	NC_025262.1	1949655	1951166	D	conserved hypothetical protein	join(1949655..1950113,1950228..1950392,1950491..1950595,1950684..1950802,1950863..1951166)	Theileria orientalis strain Shintoku	20716091
TOT_030000955	CDS	TOT_030000955	NC_025262.1	1951547	1953255	D	SJCHGC00772 protein; uncharacterized protein	join(1951547..1951642,1951673..1951732,1951830..1951903,1952000..1952116,1952374..1952695,1952838..1953061,1953153..1953255)	Theileria orientalis strain Shintoku	20716092
TOT_030000956	CDS	TOT_030000956	NC_025262.1	1953463	1956034	D	AFG1-like ATPase family protein; uncharacterized protein	join(1953463..1953579,1953666..1953995,1954053..1954544,1954707..1955218,1955353..1955422,1955453..1955568,1955699..1955842,1955923..1956034)	Theileria orientalis strain Shintoku	20716093
TOT_030000867	CDS	TOT_030000867	NC_025262.1	1956150	1956650	R	50S ribosomal protein L17	complement(1956150..1956650)	Theileria orientalis strain Shintoku	20716007
TOT_030000868	CDS	TOT_030000868	NC_025262.1	1956732	1958748	D	ribosomal protein L15	join(1956732..1956972,1957004..1957149,1957183..1957247,1957278..1957468,1957660..1957769,1957803..1957983,1958072..1958283,1958338..1958406,1958533..1958748)	Theileria orientalis strain Shintoku	20716008
TOT_030000869	CDS	TOT_030000869	NC_025262.1	1958956	1959372	R	conserved hypothetical protein	complement(join(1958956..1959265,1959347..1959372))	Theileria orientalis strain Shintoku	20716009
TOT_030000870	CDS	TOT_030000870	NC_025262.1	1960357	1963300	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1960357..1960422,1960436..1963300)	Theileria orientalis strain Shintoku	20716010
TOT_030000871	CDS	TOT_030000871	NC_025262.1	1963815	1967633	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1963815..1967633)	Theileria orientalis strain Shintoku	20716011
TOT_030000872	CDS	TOT_030000872	NC_025262.1	1968063	1969966	R	endonuclease/exonuclease/phosphatase domain containing protein; uncharacterized protein	complement(join(1968063..1968201,1968259..1968697,1968804..1969007,1969081..1969966))	Theileria orientalis strain Shintoku	20716012
TOT_030000873	CDS	TOT_030000873	NC_025262.1	1971115	1971612	R	conserved hypothetical protein	complement(1971115..1971612)	Theileria orientalis strain Shintoku	20716013
TOT_030000874	CDS	TOT_030000874	NC_025262.1	1972187	1974103	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1972187..1974103)	Theileria orientalis strain Shintoku	20716014
TOT_030000875	CDS	TOT_030000875	NC_025262.1	1974732	1975634	R	conserved hypothetical protein	complement(1974732..1975634)	Theileria orientalis strain Shintoku	20716015
TOT_030000876	CDS	TOT_030000876	NC_025262.1	1976284	1976754	R	hypothetical protein	complement(1976284..1976754)	Theileria orientalis strain Shintoku	20716016
TOT_030000877	CDS	TOT_030000877	NC_025262.1	1977141	1979864	R	conserved hypothetical protein	complement(1977141..1979864)	Theileria orientalis strain Shintoku	20716017
TOT_030000878	CDS	TOT_030000878	NC_025262.1	1980649	1981374	R	conserved hypothetical protein	complement(1980649..1981374)	Theileria orientalis strain Shintoku	20716018
TOT_030000879	CDS	TOT_030000879	NC_025262.1	1981811	1986137	R	protein of unknown function DUF101 family protein; uncharacterized protein	complement(join(1981811..1981948,1981978..1985016,1985397..1986137))	Theileria orientalis strain Shintoku	20716019
TOT_030000880	CDS	TOT_030000880	NC_025262.1	1986672	1989144	R	conserved hypothetical protein	complement(join(1986672..1988520,1988537..1988577,1988699..1988946,1989051..1989144))	Theileria orientalis strain Shintoku	20716020
TOT_030000881	CDS	TOT_030000881	NC_025262.1	1989809	1992174	D	conserved hypothetical protein	join(1989809..1990859,1991170..1991999,1992061..1992174)	Theileria orientalis strain Shintoku	20716021
TOT_030000882	CDS	TOT_030000882	NC_025262.1	1992054	1992161	R	hypothetical protein	complement(1992054..1992161)	Theileria orientalis strain Shintoku	20716022
TOT_030000883	CDS	TOT_030000883	NC_025262.1	1992185	1998189	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1992185..1992314,1992537..1997912,1998155..1998189))	Theileria orientalis strain Shintoku	20716023
TOT_040000001	CDS	TOT_040000001	NC_025263.1	904	1065	R	hypothetical protein	complement(904..1065)	Theileria orientalis strain Shintoku	20716107
TOT_040000002	CDS	TOT_040000002	NC_025263.1	1452	2519	D	conserved hypothetical protein	1452..2519	Theileria orientalis strain Shintoku	20716108
TOT_040000003	CDS	TOT_040000003	NC_025263.1	2683	2989	R	hypothetical protein	complement(join(2683..2844,2864..2989))	Theileria orientalis strain Shintoku	20716109
TOT_040000004	CDS	TOT_040000004	NC_025263.1	2997	3197	R	hypothetical protein	complement(2997..3197)	Theileria orientalis strain Shintoku	20716110
TOT_040000005	CDS	TOT_040000005	NC_025263.1	3206	5584	D	conserved hypothetical protein	3206..5584	Theileria orientalis strain Shintoku	20716111
TOT_040000006	CDS	TOT_040000006	NC_025263.1	6983	11563	R	ABC transporter	complement(6983..11563)	Theileria orientalis strain Shintoku	20716112
TOT_040000911	CDS	TOT_040000911	NC_025263.1	11996	12082	D	hypothetical protein	11996..12082	Theileria orientalis strain Shintoku	20716931
TOT_040000008	CDS	TOT_040000008	NC_025263.1	12934	17457	R	ABC transporter related domain containing protein; uncharacterized protein	complement(12934..17457)	Theileria orientalis strain Shintoku	20716113
TOT_040000009	CDS	TOT_040000009	NC_025263.1	17822	18506	R	hypothetical protein	complement(join(17822..17865,18410..18506))	Theileria orientalis strain Shintoku	20716114
TOT_040000010	CDS	TOT_040000010	NC_025263.1	18855	27477	R	conserved hypothetical protein	complement(join(18855..19471,20699..20758,21211..21396,25215..27477))	Theileria orientalis strain Shintoku	20716115
TOT_040000011	CDS	TOT_040000011	NC_025263.1	28824	29185	D	hypothetical protein	join(28824..28942,29032..29185)	Theileria orientalis strain Shintoku	20716116
TOT_040000012	CDS	TOT_040000012	NC_025263.1	29432	29905	R	hypothetical protein	complement(join(29432..29508,29755..29905))	Theileria orientalis strain Shintoku	20716117
TOT_040000013	CDS	TOT_040000013	NC_025263.1	29907	30467	D	hypothetical protein	join(29907..29929,30353..30467)	Theileria orientalis strain Shintoku	20716118
TOT_040000014	CDS	TOT_040000014	NC_025263.1	30671	30838	R	hypothetical protein	complement(30671..30838)	Theileria orientalis strain Shintoku	20716119
TOT_040000015	CDS	TOT_040000015	NC_025263.1	30880	33390	D	conserved hypothetical protein	30880..33390	Theileria orientalis strain Shintoku	20716120
TOT_040000016	CDS	TOT_040000016	NC_025263.1	35752	37209	D	hypothetical protein	35752..37209	Theileria orientalis strain Shintoku	20716121
TOT_040000017	CDS	TOT_040000017	NC_025263.1	38525	43024	R	ABC transporter related domain containing protein; uncharacterized protein	complement(join(38525..42464,42540..43024))	Theileria orientalis strain Shintoku	20716122
TOT_040000018	CDS	TOT_040000018	NC_025263.1	44231	45247	D	hypothetical protein	join(44231..44274,45127..45247)	Theileria orientalis strain Shintoku	20716123
TOT_040000019	CDS	TOT_040000019	NC_025263.1	45267	45437	D	hypothetical protein	45267..45437	Theileria orientalis strain Shintoku	20716124
TOT_040000020	CDS	TOT_040000020	NC_025263.1	46571	54971	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(46571..54593,54741..54908,54937..54971)	Theileria orientalis strain Shintoku	20716125
TOT_040000021	CDS	TOT_040000021	NC_025263.1	56424	57857	D	conserved hypothetical protein	56424..57857	Theileria orientalis strain Shintoku	20716126
TOT_040000022	CDS	TOT_040000022	NC_025263.1	59197	63738	D	ABC transporter related domain containing protein; uncharacterized protein	join(59197..59696,59796..63738)	Theileria orientalis strain Shintoku	20716127
TOT_040000023	CDS	TOT_040000023	NC_025263.1	64222	65772	R	conserved hypothetical protein	complement(64222..65772)	Theileria orientalis strain Shintoku	20716128
TOT_040000024	CDS	TOT_040000024	NC_025263.1	66219	67190	R	conserved hypothetical protein	complement(66219..67190)	Theileria orientalis strain Shintoku	20716129
TOT_040000025	CDS	TOT_040000025	NC_025263.1	68354	69518	R	hypothetical protein	complement(join(68354..69232,69444..69518))	Theileria orientalis strain Shintoku	20716130
TOT_040000026	CDS	TOT_040000026	NC_025263.1	69691	75027	R	ABC transporter related domain containing protein; uncharacterized protein	complement(join(69691..70105,70199..72082,72125..72223,72296..73597,73631..74040,74128..74602,74903..75027))	Theileria orientalis strain Shintoku	20716131
TOT_040000027	CDS	TOT_040000027	NC_025263.1	75162	76329	R	ubiquinol-cytochrome c reductase	complement(join(75162..75250,75278..75495,75546..75676,75706..76329))	Theileria orientalis strain Shintoku	20716132
TOT_040000028	CDS	TOT_040000028	NC_025263.1	76855	77902	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(76855..77041,77074..77286,77316..77902)	Theileria orientalis strain Shintoku	20716133
TOT_040000029	CDS	TOT_040000029	NC_025263.1	78175	79004	R	DNA-directed RNA polymerase	complement(join(78175..78240,78273..78347,78380..78523,78608..78689,78720..78827,78862..79004))	Theileria orientalis strain Shintoku	20716134
TOT_040000030	CDS	TOT_040000030	NC_025263.1	79242	79955	D	conserved hypothetical protein	79242..79955	Theileria orientalis strain Shintoku	20716135
TOT_040000031	CDS	TOT_040000031	NC_025263.1	80001	80469	R	ribosomal protein S17	complement(join(80001..80193,80227..80314,80391..80469))	Theileria orientalis strain Shintoku	20716136
TOT_040000032	CDS	TOT_040000032	NC_025263.1	81474	81985	D	conserved hypothetical protein	join(81474..81483,81541..81716,81770..81985)	Theileria orientalis strain Shintoku	20716137
TOT_040000033	CDS	TOT_040000033	NC_025263.1	82279	84422	D	importin alpha	join(82279..82301,82413..82922,83060..83357,83541..84155,84240..84422)	Theileria orientalis strain Shintoku	20716138
TOT_040000034	CDS	TOT_040000034	NC_025263.1	84754	88236	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(84754..87543,87592..88236)	Theileria orientalis strain Shintoku	20716139
TOT_040000035	CDS	TOT_040000035	NC_025263.1	88340	88916	R	ubiquitin carrier protein	complement(join(88340..88791,88856..88916))	Theileria orientalis strain Shintoku	20716140
TOT_040000912	CDS	TOT_040000912	NC_025263.1	89163	90725	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(89163..90430,90509..90725))	Theileria orientalis strain Shintoku	20716932
TOT_040000037	CDS	TOT_040000037	NC_025263.1	92140	92259	R	hypothetical protein	complement(92140..92259)	Theileria orientalis strain Shintoku	20716141
TOT_040000038	CDS	TOT_040000038	NC_025263.1	92303	92920	D	hypothetical protein	join(92303..92428,92460..92625,92656..92908,92914..92920)	Theileria orientalis strain Shintoku	20716142
TOT_040000039	CDS	TOT_040000039	NC_025263.1	97577	98069	R	conserved hypothetical protein	complement(join(97577..97590,97625..98069))	Theileria orientalis strain Shintoku	20716143
TOT_040000040	CDS	TOT_040000040	NC_025263.1	98525	99601	D	conserved hypothetical protein	98525..99601	Theileria orientalis strain Shintoku	20716144
TOT_040000041	CDS	TOT_040000041	NC_025263.1	99809	101118	R	phosphoinositide binding protein	complement(join(99809..100532,100574..101118))	Theileria orientalis strain Shintoku	20716145
TOT_040000042	CDS	TOT_040000042	NC_025263.1	101594	104198	D	AAA ATPase, core domain containing protein; uncharacterized protein	join(101594..101804,101845..102078,102109..102946,102977..103530,103639..103847,103878..104198)	Theileria orientalis strain Shintoku	20716146
TOT_040000043	CDS	TOT_040000043	NC_025263.1	104547	106973	D	conserved hypothetical protein	104547..106973	Theileria orientalis strain Shintoku	20716147
TOT_040000044	CDS	TOT_040000044	NC_025263.1	107157	107369	D	hypothetical protein	107157..107369	Theileria orientalis strain Shintoku	20716148
TOT_040000045	CDS	TOT_040000045	NC_025263.1	107698	108718	D	conserved hypothetical protein	join(107698..107839,107916..108718)	Theileria orientalis strain Shintoku	20716149
TOT_040000046	CDS	TOT_040000046	NC_025263.1	108777	109395	R	EF-Hand type domain containing protein; uncharacterized protein	complement(join(108777..108831,108868..108959,108990..109145,109245..109298,109333..109395))	Theileria orientalis strain Shintoku	20716150
TOT_040000047	CDS	TOT_040000047	NC_025263.1	109577	110232	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(109577..109698,109709..109928,109975..110232))	Theileria orientalis strain Shintoku	20716151
TOT_040000048	CDS	TOT_040000048	NC_025263.1	110581	112387	R	amidase signature enzyme family protein; uncharacterized protein	complement(join(110581..110745,110776..110957,110989..111315,111471..111965,111997..112387))	Theileria orientalis strain Shintoku	20716152
TOT_040000049	CDS	TOT_040000049	NC_025263.1	112669	114263	R	S-adenosylmethionine synthetase	complement(join(112669..113298,113436..113677,113768..113872,113937..114084,114132..114263))	Theileria orientalis strain Shintoku	20716153
TOT_040000050	CDS	TOT_040000050	NC_025263.1	114758	115257	D	high-mobility group protein	join(114758..114884,114918..115021,115099..115257)	Theileria orientalis strain Shintoku	20716154
TOT_040000051	CDS	TOT_040000051	NC_025263.1	115681	116051	R	vacuolar sorting protein 9 domain containing protein; uncharacterized protein	complement(join(115681..115729,115797..115933,116034..116051))	Theileria orientalis strain Shintoku	20716155
TOT_040000052	CDS	TOT_040000052	NC_025263.1	116341	116972	D	beta-Ig-H3/fasciclin domain containing protein; uncharacterized protein	join(116341..116548,116581..116972)	Theileria orientalis strain Shintoku	20716156
TOT_040000053	CDS	TOT_040000053	NC_025263.1	117017	121064	D	S1, RNA binding domain containing protein; uncharacterized protein	join(117017..117047,117099..117219,117251..117332,117369..117728,117758..117981,118033..118124,118194..118342,118395..118486,118534..118605,118635..119438,119525..120281,120345..120436,120713..121064)	Theileria orientalis strain Shintoku	20716157
TOT_040000054	CDS	TOT_040000054	NC_025263.1	121150	123867	R	SNF2-related domain containing protein; uncharacterized protein	complement(join(121150..121893,122011..123867))	Theileria orientalis strain Shintoku	20716158
TOT_040000055	CDS	TOT_040000055	NC_025263.1	123964	125130	R	conserved hypothetical protein	complement(123964..125130)	Theileria orientalis strain Shintoku	20716159
TOT_040000056	CDS	TOT_040000056	NC_025263.1	125644	130177	R	transglutaminase, C-terminal domain containing protein; uncharacterized protein	complement(join(125644..125749,125780..125913,125944..126072,126103..126308,126382..126973,127055..128866,128915..130177))	Theileria orientalis strain Shintoku	20716160
TOT_040000057	CDS	TOT_040000057	NC_025263.1	131185	134610	D	glutamate dehydrogenase	131185..134610	Theileria orientalis strain Shintoku	20716161
TOT_040000058	CDS	TOT_040000058	NC_025263.1	134756	136041	R	dihydroorotase	complement(join(134756..134992,135025..135085,135139..135449,135476..135604,135636..135686,135718..135901,135950..136041))	Theileria orientalis strain Shintoku	20716162
TOT_040000059	CDS	TOT_040000059	NC_025263.1	136215	138288	R	N-acetylglucosaminyl transferase component family protein; uncharacterized protein	complement(join(136215..136349,136380..136444,136450..136772,136802..137116,137148..137316,137373..137896,137930..138075,138139..138288))	Theileria orientalis strain Shintoku	20716163
TOT_040000060	CDS	TOT_040000060	NC_025263.1	138397	140472	R	serine/threonine protein kinase	complement(138397..140472)	Theileria orientalis strain Shintoku	20716164
TOT_040000061	CDS	TOT_040000061	NC_025263.1	140713	142203	D	mannose-6-phosphate isomerase, type I family protein; uncharacterized protein	join(140713..141577,141655..141890,141955..142203)	Theileria orientalis strain Shintoku	20716165
TOT_040000062	CDS	TOT_040000062	NC_025263.1	142276	144383	R	ubiquitin-like protease	complement(join(142276..142384,142493..142770,142914..143249,143364..143492,143534..143716,143796..144383))	Theileria orientalis strain Shintoku	20716166
TOT_040000063	CDS	TOT_040000063	NC_025263.1	144426	152037	R	likely GTP/GDP exchange factor for ARF	complement(join(144426..144914,144944..145179,145212..145293,145918..146011,146167..147268,147446..147769,147821..149396,149442..151211,151242..151350,151381..151493,151524..151648,151680..152037))	Theileria orientalis strain Shintoku	20716167
TOT_040000064	CDS	TOT_040000064	NC_025263.1	152538	154882	D	protein prenyltransferase domain containing protein; uncharacterized protein	join(152538..152941,152972..153111,153163..153355,153425..153595,153627..153686,153720..154112,154147..154269,154472..154591,154720..154882)	Theileria orientalis strain Shintoku	20716168
TOT_040000065	CDS	TOT_040000065	NC_025263.1	155157	155457	R	hypothetical protein	complement(join(155157..155240,155374..155457))	Theileria orientalis strain Shintoku	20716169
TOT_040000066	CDS	TOT_040000066	NC_025263.1	156406	158178	D	conserved hypothetical protein	156406..158178	Theileria orientalis strain Shintoku	20716170
TOT_040000067	CDS	TOT_040000067	NC_025263.1	158384	160562	D	phenylalanyl-tRNA synthetase	join(158384..158441,158474..158582,158625..158754,158786..159073,159104..159250,159282..159358,159390..160026,160057..160155,160187..160322,160354..160562)	Theileria orientalis strain Shintoku	20716171
TOT_040000068	CDS	TOT_040000068	NC_025263.1	160765	162868	D	conserved hypothetical protein	join(160765..162594,162637..162691,162724..162761,162794..162868)	Theileria orientalis strain Shintoku	20716172
TOT_040000069	CDS	TOT_040000069	NC_025263.1	162891	163989	D	conserved hypothetical protein	join(162891..162944,162987..163118,163151..163427,163459..163485,163519..163617,163657..163736,163772..163843,163879..163989)	Theileria orientalis strain Shintoku	20716173
TOT_040000070	CDS	TOT_040000070	NC_025263.1	164535	169241	D	beta-tubulin cofactor D	join(164535..167883,168154..169241)	Theileria orientalis strain Shintoku	20716174
TOT_040000071	CDS	TOT_040000071	NC_025263.1	169246	169752	R	conserved hypothetical protein	complement(169246..169752)	Theileria orientalis strain Shintoku	20716175
TOT_040000072	CDS	TOT_040000072	NC_025263.1	170450	173948	D	conserved hypothetical protein	join(170450..170797,170833..173541,173573..173674,173706..173948)	Theileria orientalis strain Shintoku	20716176
TOT_040000913	CDS	TOT_040000913	NC_025263.1	174051	174902	R	protein of unknown function DUF558, methyltransferase predicted family protein; uncharacterized protein	complement(join(174051..174455,174567..174648,174679..174902))	Theileria orientalis strain Shintoku	20716933
TOT_040000914	CDS	TOT_040000914	NC_025263.1	174938	176133	R	conserved hypothetical protein	complement(join(174938..175027,175063..175142,175177..175252,175288..175335,175367..175447,175480..176133))	Theileria orientalis strain Shintoku	20716934
TOT_040000075	CDS	TOT_040000075	NC_025263.1	176309	176938	D	conserved hypothetical protein	176309..176938	Theileria orientalis strain Shintoku	20716177
TOT_040000076	CDS	TOT_040000076	NC_025263.1	177185	177787	D	nascent polypeptide associated complex subunit alpha	177185..177787	Theileria orientalis strain Shintoku	20716178
TOT_040000077	CDS	TOT_040000077	NC_025263.1	177921	179985	R	signal recognition particle subunit	complement(join(177921..178202,178232..178533,178567..178653,178748..178787,178818..179369,179399..179515,179547..179845,179880..179985))	Theileria orientalis strain Shintoku	20716179
TOT_040000078	CDS	TOT_040000078	NC_025263.1	180096	181378	R	conserved hypothetical protein	complement(join(180096..180179,180211..180283,180319..180387,180420..180554,180585..180677,180709..180803,180837..180926,180958..181035,181068..181192,181225..181378))	Theileria orientalis strain Shintoku	20716180
TOT_040000079	CDS	TOT_040000079	NC_025263.1	181918	182607	D	RAP domain containing protein; uncharacterized protein	181918..182607	Theileria orientalis strain Shintoku	20716181
TOT_040000080	CDS	TOT_040000080	NC_025263.1	182651	182971	R	conserved hypothetical protein	complement(182651..182971)	Theileria orientalis strain Shintoku	20716182
TOT_040000081	CDS	TOT_040000081	NC_025263.1	183078	183761	R	protein of unknown function DUF947 family protein; uncharacterized protein	complement(183078..183761)	Theileria orientalis strain Shintoku	20716183
TOT_040000082	CDS	TOT_040000082	NC_025263.1	184039	187612	D	RNase L inhibitor protein	join(184039..184180,184262..184470,184505..184729,184760..185165,185206..185291,185325..185464,185495..185823,185852..185984,186021..186196,186375..187612)	Theileria orientalis strain Shintoku	20716184
TOT_040000083	CDS	TOT_040000083	NC_025263.1	187772	189875	R	peptidase M22, O-sialoglycoprotein endopeptidase family protein; uncharacterized protein	complement(join(187772..188355,188473..188562,188596..188720,188755..188877,188943..189082,189113..189327,189359..189498,189532..189875))	Theileria orientalis strain Shintoku	20716185
TOT_040000084	CDS	TOT_040000084	NC_025263.1	189962	191247	D	conserved hypothetical protein	join(189962..190160,190197..190286,190321..190496,190531..190671,190727..190789,190826..190936,190975..191247)	Theileria orientalis strain Shintoku	20716186
TOT_040000085	CDS	TOT_040000085	NC_025263.1	191404	192557	R	metal-dependent protein hydrolase family protein; uncharacterized protein	complement(join(191404..191504,191536..191731,191762..191866,191899..191923,191955..191998,192031..192383,192395..192557))	Theileria orientalis strain Shintoku	20716187
TOT_040000086	CDS	TOT_040000086	NC_025263.1	193592	194731	D	conserved hypothetical protein	join(193592..193914,194242..194731)	Theileria orientalis strain Shintoku	20716188
TOT_040000087	CDS	TOT_040000087	NC_025263.1	195148	196948	R	RIO kinase family protein; uncharacterized protein	complement(join(195148..195293,195603..195726,195767..195881,196006..196126,196158..196302,196332..196543,196573..196948))	Theileria orientalis strain Shintoku	20716189
TOT_040000088	CDS	TOT_040000088	NC_025263.1	197328	198716	D	50S ribosomal protein L21	join(197328..197582,197614..197901,197933..198367,198386..198517,198558..198716)	Theileria orientalis strain Shintoku	20716190
TOT_040000915	CDS	TOT_040000915	NC_025263.1	198932	199798	R	heat shock protein DnaJ, N-terminal domain containing protein; uncharacterized protein	complement(198932..199798)	Theileria orientalis strain Shintoku	20716935
TOT_040000090	CDS	TOT_040000090	NC_025263.1	200025	201881	R	conserved hypothetical protein	complement(join(200025..200463,200535..200675,200718..200800,200841..201881))	Theileria orientalis strain Shintoku	20716191
TOT_040000916	CDS	TOT_040000916	NC_025263.1	202643	203276	D	40S ribosomal protein S7	join(202643..203061,203117..203276)	Theileria orientalis strain Shintoku	20716936
TOT_040000917	CDS	TOT_040000917	NC_025263.1	203344	203505	D	hypothetical protein	203344..203505	Theileria orientalis strain Shintoku	20716937
TOT_040000093	CDS	TOT_040000093	NC_025263.1	203579	204680	R	iojap-related protein family protein; uncharacterized protein	complement(join(203579..203648,203683..203981,204013..204386,204422..204680))	Theileria orientalis strain Shintoku	20716192
TOT_040000094	CDS	TOT_040000094	NC_025263.1	207341	208755	R	ribosomal L11 methyltransferase family protein; uncharacterized protein	complement(join(207341..208101,208134..208755))	Theileria orientalis strain Shintoku	20716193
TOT_040000095	CDS	TOT_040000095	NC_025263.1	209355	209738	D	40S ribosomal protein S10	join(209355..209430,209470..209738)	Theileria orientalis strain Shintoku	20716194
TOT_040000096	CDS	TOT_040000096	NC_025263.1	210096	212068	R	K Homology, type 1 domain containing protein; uncharacterized protein	complement(join(210096..211619,211997..212068))	Theileria orientalis strain Shintoku	20716195
TOT_040000097	CDS	TOT_040000097	NC_025263.1	212743	214040	R	conserved hypothetical protein	complement(join(212743..213020,213053..213207,213239..213626,213695..214040))	Theileria orientalis strain Shintoku	20716196
TOT_040000098	CDS	TOT_040000098	NC_025263.1	214183	214917	R	conserved hypothetical protein	complement(214183..214917)	Theileria orientalis strain Shintoku	20716197
TOT_040000099	CDS	TOT_040000099	NC_025263.1	215153	215895	D	vacuolar proton-translocating ATPase	join(215153..215256,215389..215673,215708..215811,215846..215895)	Theileria orientalis strain Shintoku	20716198
TOT_040000100	CDS	TOT_040000100	NC_025263.1	216068	218626	D	FtsJ cell division protein	join(216068..216204,216291..216474,216506..218626)	Theileria orientalis strain Shintoku	20716199
TOT_040000101	CDS	TOT_040000101	NC_025263.1	218704	219129	D	conserved hypothetical protein	218704..219129	Theileria orientalis strain Shintoku	20716200
TOT_040000102	CDS	TOT_040000102	NC_025263.1	219142	220339	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(219142..219195,219225..219278,219329..219427,219465..219646,219674..219760,219797..219842,219883..219988,220071..220339))	Theileria orientalis strain Shintoku	20716201
TOT_040000103	CDS	TOT_040000103	NC_025263.1	220442	221284	R	proteasome subunit alpha type	complement(join(220442..220657,220688..220837,220875..220964,220995..221082,221115..221284))	Theileria orientalis strain Shintoku	20716202
TOT_040000104	CDS	TOT_040000104	NC_025263.1	221491	223308	D	proteasome component	join(221491..221847,221878..222051,222131..222350,222533..222645,222663..222923,222995..223083,223149..223308)	Theileria orientalis strain Shintoku	20716203
TOT_040000105	CDS	TOT_040000105	NC_025263.1	223400	226207	D	conserved hypothetical protein	join(223400..225187,225251..226207)	Theileria orientalis strain Shintoku	20716204
TOT_040000106	CDS	TOT_040000106	NC_025263.1	226855	227625	D	endoplasmic reticulum lumen protein ERD2	join(226855..227000,227033..227211,227279..227625)	Theileria orientalis strain Shintoku	20716205
TOT_040000918	CDS	TOT_040000918	NC_025263.1	227830	229143	R	transcription factor Tfb4 family protein; uncharacterized protein	complement(join(227830..227896,227926..227983,228021..228156,228188..228304,228341..228379,228484..228614,228651..228844,228887..229143))	Theileria orientalis strain Shintoku	20716938
TOT_040000108	CDS	TOT_040000108	NC_025263.1	229302	231557	R	asparagine-rich protein	complement(join(229302..231247,231293..231557))	Theileria orientalis strain Shintoku	20716206
TOT_040000109	CDS	TOT_040000109	NC_025263.1	231835	233627	D	DEAD-box family ATP-dependent helicase	join(231835..232087,232153..232634,232665..232925,232960..233013,233139..233423,233454..233627)	Theileria orientalis strain Shintoku	20716207
TOT_040000110	CDS	TOT_040000110	NC_025263.1	233841	235564	R	serine/threonine kinase	complement(join(233841..234077,234277..234529,234568..234670,234702..234892,234998..235089,235121..235230,235260..235457,235489..235564))	Theileria orientalis strain Shintoku	20716208
TOT_040000111	CDS	TOT_040000111	NC_025263.1	235763	236269	D	conserved hypothetical protein	235763..236269	Theileria orientalis strain Shintoku	20716209
TOT_040000112	CDS	TOT_040000112	NC_025263.1	236275	237362	R	Plasmodium falciparum CPW-WPC repeat containing protein	complement(join(236275..236412,236534..236672,236715..236777,236807..236858,236889..236917,236951..236968,237003..237042,237085..237145,237177..237230,237261..237362))	Theileria orientalis strain Shintoku	20716210
TOT_040000113	CDS	TOT_040000113	NC_025263.1	237399	237968	R	hypothetical protein	complement(join(237399..237515,237541..237612,237888..237968))	Theileria orientalis strain Shintoku	20716211
TOT_040000919	CDS	TOT_040000919	NC_025263.1	237630	238307	D	conserved hypothetical protein	join(237630..237728,237821..237883,237915..237954,237984..238083,238154..238193,238225..238258,238294..238307)	Theileria orientalis strain Shintoku	20716939
TOT_040000115	CDS	TOT_040000115	NC_025263.1	238506	246103	R	DNA polymerase epsilon catalytic subunit	complement(join(238506..238574,238668..238779,238812..238928,238971..239044,239075..239477,239509..239657,239694..239897,239927..240088,240123..240428,240462..240642,240674..240765,240804..241013,241044..241197,241321..241468,241503..241866,241934..244010,244074..246103))	Theileria orientalis strain Shintoku	20716212
TOT_040000116	CDS	TOT_040000116	NC_025263.1	246496	247301	R	conserved hypothetical protein	complement(join(246496..246829,246942..247087,247118..247204,247239..247301))	Theileria orientalis strain Shintoku	20716213
TOT_040000118	CDS	TOT_040000118	NC_025263.1	247325	250331	R	SET domain containing protein; uncharacterized protein	complement(join(247325..247396,247569..250331))	Theileria orientalis strain Shintoku	20716214
TOT_040000119	CDS	TOT_040000119	NC_025263.1	250779	252424	D	microtubule-associated protein	join(250779..250892,250935..251020,251052..251188,251220..251340,251370..251486,251518..251611,251645..251691,251723..251786,251819..251935,251976..252260,252302..252424)	Theileria orientalis strain Shintoku	20716215
TOT_040000120	CDS	TOT_040000120	NC_025263.1	252669	255011	D	conserved hypothetical protein	join(252669..252783,252861..252920,252984..253272,253321..253699,253730..253903,253946..254008,254040..254327,254370..254457,254490..254600,254773..255011)	Theileria orientalis strain Shintoku	20716216
TOT_040000121	CDS	TOT_040000121	NC_025263.1	254799	256585	R	methylase	complement(join(254799..255012,255017..256357,256398..256585))	Theileria orientalis strain Shintoku	20716217
TOT_040000122	CDS	TOT_040000122	NC_025263.1	256732	259126	D	peptidase C78, ubiquitin fold modifier-specific peptidase 1 and 2 family protein; uncharacterized protein	join(256732..256891,256935..257191,257251..258300,258342..258440,258479..258857,258913..259004,259049..259126)	Theileria orientalis strain Shintoku	20716218
TOT_040000123	CDS	TOT_040000123	NC_025263.1	259251	260309	D	methyltransferase	join(259251..259545,259684..260309)	Theileria orientalis strain Shintoku	20716219
TOT_040000124	CDS	TOT_040000124	NC_025263.1	260674	276182	R	predicted protein	complement(join(260674..260811,260924..261286,261316..261442,261756..262137,262216..265825,266002..266566,266618..267074,267156..267540,267712..269406,269612..271456,271674..273611,273801..275278,275348..275678,275829..276182))	Theileria orientalis strain Shintoku	20716220
TOT_040000125	CDS	TOT_040000125	NC_025263.1	277429	278993	D	protein of unknown function DUF250 domain containing protein; uncharacterized protein	join(277429..277863,277896..277928,277959..278038,278071..278138,278168..278397,278431..278510,278547..278652,278683..278892,278925..278993)	Theileria orientalis strain Shintoku	20716221
TOT_040000920	CDS	TOT_040000920	NC_025263.1	279148	279405	D	predicted protein	279148..279405	Theileria orientalis strain Shintoku	20716940
TOT_040000921	CDS	TOT_040000921	NC_025263.1	280239	281783	D	pentatricopeptide repeat containing protein	join(280239..280524,280627..281783)	Theileria orientalis strain Shintoku	20716941
TOT_040000128	CDS	TOT_040000128	NC_025263.1	282006	285056	D	endopeptidase ATP-binding subunit	join(282006..282420,282452..282957,282993..283191,283223..283344,283408..283608,283737..283879,283921..284796,284831..285056)	Theileria orientalis strain Shintoku	20716222
TOT_040000129	CDS	TOT_040000129	NC_025263.1	285159	285856	D	vacuolar protein sorting	join(285159..285417,285459..285856)	Theileria orientalis strain Shintoku	20716223
TOT_040000130	CDS	TOT_040000130	NC_025263.1	285955	286854	R	conserved hypothetical protein	complement(join(285955..286166,286199..286506,286538..286854))	Theileria orientalis strain Shintoku	20716224
TOT_040000131	CDS	TOT_040000131	NC_025263.1	287668	288676	D	florfenicol resistance protein	join(287668..287985,288021..288159,288196..288347,288396..288449,288479..288676)	Theileria orientalis strain Shintoku	20716225
TOT_040000132	CDS	TOT_040000132	NC_025263.1	288744	289102	D	hypothetical protein	join(288744..288880,288923..288972,289020..289102)	Theileria orientalis strain Shintoku	20716226
TOT_040000133	CDS	TOT_040000133	NC_025263.1	289308	293914	D	lipoxygenase, LH2 domain containing protein; uncharacterized protein	join(289308..289456,289488..289571,289638..289721,289753..290343,290375..290523,290555..290617,290650..290790,290825..290891,290926..291088,291120..291434,291466..291565,291597..291861,291895..291946,291977..292136,292168..292242,292393..292500,292532..292675,292707..292816,292881..293391,293422..293508,293540..293641,293675..293730,293768..293914)	Theileria orientalis strain Shintoku	20716227
TOT_040000134	CDS	TOT_040000134	NC_025263.1	294042	295129	D	fibrillarin	join(294042..294048,294198..294397,294427..294550,294585..294694,294823..295046,295114..295129)	Theileria orientalis strain Shintoku	20716228
TOT_040000135	CDS	TOT_040000135	NC_025263.1	295278	296245	R	fibrillarin	complement(join(295278..295513,295546..295662,295755..296033,296065..296245))	Theileria orientalis strain Shintoku	20716229
TOT_040000136	CDS	TOT_040000136	NC_025263.1	296746	299105	D	splicing component	join(296746..296938,296974..297051,297089..297209,297241..297315,297346..297493,297524..297610,297641..297770,297868..298009,298040..298370,298645..298794,298835..298921,298961..299024,299062..299105)	Theileria orientalis strain Shintoku	20716230
TOT_040000137	CDS	TOT_040000137	NC_025263.1	299237	299407	R	hypothetical protein	complement(299237..299407)	Theileria orientalis strain Shintoku	20716231
TOT_040000138	CDS	TOT_040000138	NC_025263.1	299534	301725	D	CDK homologue; cell-cycle-related serine/threonine protein kinase	join(299534..300016,300049..300097,300132..300433,300473..300691,300807..300973,301005..301496,301701..301725)	Theileria orientalis strain Shintoku	20716232
TOT_040000139	CDS	TOT_040000139	NC_025263.1	302529	303734	D	conserved hypothetical protein	302529..303734	Theileria orientalis strain Shintoku	20716233
TOT_040000140	CDS	TOT_040000140	NC_025263.1	304009	304770	D	conserved hypothetical protein	join(304009..304075,304116..304204,304239..304313,304370..304506,304536..304611,304702..304770)	Theileria orientalis strain Shintoku	20716234
TOT_040000141	CDS	TOT_040000141	NC_025263.1	305269	307049	R	GTPase	complement(join(305269..305415,305449..305551,305590..305633,305667..305790,305825..305877,305926..306167,306198..306303,306336..306498,306525..306597,306628..306816,306846..306921,306954..307049))	Theileria orientalis strain Shintoku	20716235
TOT_040000142	CDS	TOT_040000142	NC_025263.1	307623	310029	D	ataxin-2, N-terminal domain containing protein; uncharacterized protein	join(307623..307748,307784..308159,308191..308254,308285..308549,308712..308831,308863..309348,309379..309468,309500..309901,309934..310029)	Theileria orientalis strain Shintoku	20716236
TOT_040000143	CDS	TOT_040000143	NC_025263.1	310742	311958	D	conserved hypothetical protein	join(310742..311024,311060..311853,311890..311958)	Theileria orientalis strain Shintoku	20716237
TOT_040000144	CDS	TOT_040000144	NC_025263.1	312100	314974	R	helicase	complement(join(312100..312199,312210..314974))	Theileria orientalis strain Shintoku	20716238
TOT_040000145	CDS	TOT_040000145	NC_025263.1	315474	320336	D	conserved hypothetical protein	join(315474..315797,315939..320336)	Theileria orientalis strain Shintoku	20716239
TOT_040000146	CDS	TOT_040000146	NC_025263.1	320648	321797	D	Hbeta58/Vps26 protein	join(320648..320650,320725..320841,320874..320970,321002..321067,321098..321227,321258..321336,321366..321522,321553..321797)	Theileria orientalis strain Shintoku	20716240
TOT_040000147	CDS	TOT_040000147	NC_025263.1	321960	322608	D	transcription initiation factor IIA, gamma subunit family protein; uncharacterized protein	join(321960..322109,322203..322356,322460..322608)	Theileria orientalis strain Shintoku	20716241
TOT_040000148	CDS	TOT_040000148	NC_025263.1	323029	324369	R	conserved hypothetical protein	complement(join(323029..323205,323235..323481,323512..323623,323664..323811,323841..323950,324045..324146,324207..324369))	Theileria orientalis strain Shintoku	20716242
TOT_040000149	CDS	TOT_040000149	NC_025263.1	324579	325968	R	conserved hypothetical protein	complement(join(324579..324978,325008..325202,325245..325701,325731..325968))	Theileria orientalis strain Shintoku	20716243
TOT_040000150	CDS	TOT_040000150	NC_025263.1	326377	326943	D	conserved hypothetical protein	326377..326943	Theileria orientalis strain Shintoku	20716244
TOT_040000151	CDS	TOT_040000151	NC_025263.1	326985	330675	R	protein kinase	complement(join(326985..327074,327108..327178,327346..327386,327417..327466,327496..327615,327681..327749,327887..327935,327973..328054,328086..328915,329032..329191,329202..329802,329837..329872,329911..330010,330044..330258,330289..330675))	Theileria orientalis strain Shintoku	20716245
TOT_040000152	CDS	TOT_040000152	NC_025263.1	330937	332235	D	tryptophanyl-tRNA synthetase	join(330937..331119,331216..331330,331365..331523,331556..331641,331672..331832,331868..332001,332033..332235)	Theileria orientalis strain Shintoku	20716246
TOT_040000153	CDS	TOT_040000153	NC_025263.1	332764	334910	R	conserved hypothetical protein	complement(join(332764..333243,333597..333836,333897..334910))	Theileria orientalis strain Shintoku	20716247
TOT_040000154	CDS	TOT_040000154	NC_025263.1	335441	337634	R	DEAD-box family helicase	complement(join(335441..335610,335642..335934,335967..336080,336192..336301,336334..336570,336593..336703,336740..336847,336880..337011,337049..337125,337156..337255,337294..337479,337569..337634))	Theileria orientalis strain Shintoku	20716248
TOT_040000155	CDS	TOT_040000155	NC_025263.1	337947	340634	R	conserved hypothetical protein	complement(337947..340634)	Theileria orientalis strain Shintoku	20716249
TOT_040000156	CDS	TOT_040000156	NC_025263.1	341538	343200	D	coronin	join(341538..341568,341677..341768,341801..341888,341923..341994,342026..342299,342332..342638,342670..343017,343051..343200)	Theileria orientalis strain Shintoku	20716250
TOT_040000157	CDS	TOT_040000157	NC_025263.1	344582	345076	D	60S ribosomal protein L26	join(344582..344597,344679..345076)	Theileria orientalis strain Shintoku	20716251
TOT_040000158	CDS	TOT_040000158	NC_025263.1	345112	345773	R	calcium-binding EF-hand domain containing protein; uncharacterized protein	complement(join(345112..345293,345326..345427,345460..345489,345525..345591,345627..345681,345721..345773))	Theileria orientalis strain Shintoku	20716252
TOT_040000159	CDS	TOT_040000159	NC_025263.1	345952	347586	D	methionine aminopeptidase	join(345952..346078,346184..346396,346473..346592,346660..346749,346835..346905,346937..347108,347148..347195,347441..347586)	Theileria orientalis strain Shintoku	20716253
TOT_040000160	CDS	TOT_040000160	NC_025263.1	347696	348789	R	GYF domain containing protein; uncharacterized protein	complement(join(347696..347971,348010..348107,348142..348201,348233..348473,348503..348673,348706..348789))	Theileria orientalis strain Shintoku	20716254
TOT_040000161	CDS	TOT_040000161	NC_025263.1	349152	350926	D	ubiquitin carboxyl-terminal hydrolase	join(349152..349264,349324..349552,349586..349783,349814..349868,349906..349931,349962..350444,350477..350926)	Theileria orientalis strain Shintoku	20716255
TOT_040000162	CDS	TOT_040000162	NC_025263.1	351224	352793	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(351224..351623,351664..351827,351858..352008,352130..352570,352699..352793)	Theileria orientalis strain Shintoku	20716256
TOT_040000163	CDS	TOT_040000163	NC_025263.1	353324	354756	D	protein of unknown function DUF155 family protein; uncharacterized protein	join(353324..353368,353549..353658,353951..354101,354161..354235,354265..354318,354364..354439,354471..354582,354726..354756)	Theileria orientalis strain Shintoku	20716257
TOT_040000164	CDS	TOT_040000164	NC_025263.1	354938	355847	R	Der1-like domain containing protein; uncharacterized protein	complement(join(354938..355125,355218..355457,355487..355847))	Theileria orientalis strain Shintoku	20716258
TOT_040000165	CDS	TOT_040000165	NC_025263.1	356244	357017	D	conserved hypothetical protein	join(356244..356309,356342..356450,356480..356676,356709..356809,356849..356918,356979..357017)	Theileria orientalis strain Shintoku	20716259
TOT_040000166	CDS	TOT_040000166	NC_025263.1	357298	359064	D	proteasome subunit	357298..359064	Theileria orientalis strain Shintoku	20716260
TOT_040000167	CDS	TOT_040000167	NC_025263.1	359221	360364	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(359221..359268,359387..359481,359571..359653,359692..359858,359889..360078,360113..360289,360315..360364)	Theileria orientalis strain Shintoku	20716261
TOT_040000168	CDS	TOT_040000168	NC_025263.1	360410	360595	R	hypothetical protein	complement(360410..360595)	Theileria orientalis strain Shintoku	20716262
TOT_040000169	CDS	TOT_040000169	NC_025263.1	360601	361232	D	conserved hypothetical protein	join(360601..360706,360739..361232)	Theileria orientalis strain Shintoku	20716263
TOT_040000170	CDS	TOT_040000170	NC_025263.1	361372	363150	D	glycosyl transferase	join(361372..361492,361536..361735,361764..361883,361915..362037,362069..362225,362282..362359,362390..362571,362606..362722,362753..362794,362856..362943,362975..363150)	Theileria orientalis strain Shintoku	20716264
TOT_040000922	CDS	TOT_040000922	NC_025263.1	363696	365588	R	conserved hypothetical protein	complement(join(363696..363827,363860..363979,364033..364099,364238..364336,364367..364710,364741..364944,364977..365044,365077..365153,365336..365432,365504..365588))	Theileria orientalis strain Shintoku	20716942
TOT_040000172	CDS	TOT_040000172	NC_025263.1	365657	366798	R	Dcp1-like decapping family protein; uncharacterized protein	complement(join(365657..366085,366148..366342,366371..366551,366582..366700,366733..366798))	Theileria orientalis strain Shintoku	20716265
TOT_040000173	CDS	TOT_040000173	NC_025263.1	366965	371485	R	conserved hypothetical protein	complement(join(366965..367226,367263..371485))	Theileria orientalis strain Shintoku	20716266
TOT_040000174	CDS	TOT_040000174	NC_025263.1	371647	374861	R	conserved hypothetical protein	complement(join(371647..371777,371992..373361,373401..374769,374804..374861))	Theileria orientalis strain Shintoku	20716267
TOT_040000175	CDS	TOT_040000175	NC_025263.1	375234	376001	D	nucleoside diphosphate hydrolase	join(375234..375552,375583..375729,375759..375844,375876..376001)	Theileria orientalis strain Shintoku	20716268
TOT_040000176	CDS	TOT_040000176	NC_025263.1	376416	376784	R	hypothetical protein	complement(376416..376784)	Theileria orientalis strain Shintoku	20716269
TOT_040000177	CDS	TOT_040000177	NC_025263.1	376842	379988	R	WW/Rsp5/WWP domain containing protein; uncharacterized protein	complement(join(376842..376957,376992..377131,377174..377290,377326..378277,378346..378449,378811..379351,379384..379515,379545..379875,379914..379988))	Theileria orientalis strain Shintoku	20716270
TOT_040000178	CDS	TOT_040000178	NC_025263.1	380622	381116	D	40S ribosomal protein S27a	380622..381116	Theileria orientalis strain Shintoku	20716271
TOT_040000896	CDS	TOT_040000896	NC_025263.1	381321	384414	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(381321..381689,381822..381941,382063..382166,382198..382252,382295..382392,382486..382609,382645..382846,382950..383060,383103..383154,383194..383242,383273..383350,383415..383824,383858..383929,383962..384094,384160..384318,384355..384414))	Theileria orientalis strain Shintoku	20716923
TOT_040000179	CDS	TOT_040000179	NC_025263.1	384584	385205	R	conserved hypothetical protein	complement(join(384584..385095,385142..385205))	Theileria orientalis strain Shintoku	20716272
TOT_040000180	CDS	TOT_040000180	NC_025263.1	385614	385962	D	Os04g0295000 protein; uncharacterized protein	join(385614..385647,385664..385962)	Theileria orientalis strain Shintoku	20716273
TOT_040000181	CDS	TOT_040000181	NC_025263.1	386493	387357	D	ribosomal protein S2	join(386493..386558,386590..387357)	Theileria orientalis strain Shintoku	20716274
TOT_040000182	CDS	TOT_040000182	NC_025263.1	387708	389645	D	conserved hypothetical protein	387708..389645	Theileria orientalis strain Shintoku	20716275
TOT_040000183	CDS	TOT_040000183	NC_025263.1	389998	391291	D	conserved hypothetical protein	join(389998..390295,390325..390567,390597..390825,390855..391014,391088..391291)	Theileria orientalis strain Shintoku	20716276
TOT_040000184	CDS	TOT_040000184	NC_025263.1	391421	394699	R	16S rRNA processing protein	complement(join(391421..392047,392142..392824,393078..393124,393167..393309,393342..393451,393505..393681,393715..393786,393816..393924,393956..394108,394139..394336,394421..394699))	Theileria orientalis strain Shintoku	20716277
TOT_040000185	CDS	TOT_040000185	NC_025263.1	394926	396567	D	conserved hypothetical protein	join(394926..395125,395164..395214,395246..395287,395318..395366,395397..395532,395564..395773,395883..395926,396181..396567)	Theileria orientalis strain Shintoku	20716278
TOT_040000186	CDS	TOT_040000186	NC_025263.1	396835	400333	R	conserved hypothetical protein	complement(join(396835..396850,396861..397112,397206..398410,398500..398715,398841..399347,399383..400333))	Theileria orientalis strain Shintoku	20716279
TOT_040000187	CDS	TOT_040000187	NC_025263.1	400854	404265	D	valyl-tRNA synthetase	join(400854..400875,400909..401353,401383..401600,401631..403087,403280..403792,403911..404066,404098..404265)	Theileria orientalis strain Shintoku	20716280
TOT_040000188	CDS	TOT_040000188	NC_025263.1	404678	407545	R	eukaryotic translation initiation factor 3 subunit 8	complement(404678..407545)	Theileria orientalis strain Shintoku	20716281
TOT_040000923	CDS	TOT_040000923	NC_025263.1	408015	410424	D	peptidase M24, catalytic core domain containing protein; uncharacterized protein	join(408015..408223,408243..408367,408401..408657,408689..408789,408819..408890,408921..409110,409142..409231,409263..409343,409376..409446,409555..409708,409858..410268,410302..410424)	Theileria orientalis strain Shintoku	20716943
TOT_040000924	CDS	TOT_040000924	NC_025263.1	410513	410996	D	mitochondrial large subunit ribosomal protein	join(410513..410638,410712..410813,410865..410996)	Theileria orientalis strain Shintoku	20716944
TOT_040000925	CDS	TOT_040000925	NC_025263.1	411089	411377	R	40S ribosomal protein S21	complement(join(411089..411223,411264..411377))	Theileria orientalis strain Shintoku	20716945
TOT_040000192	CDS	TOT_040000192	NC_025263.1	411639	414992	R	peptidase S59, nucleoporin family protein; uncharacterized protein	complement(join(411639..412346,412647..412717,412907..414992))	Theileria orientalis strain Shintoku	20716282
TOT_040000193	CDS	TOT_040000193	NC_025263.1	415296	416684	D	conserved hypothetical protein	join(415296..415354,415397..415493,415527..415970,416005..416115,416152..416280,416312..416563,416598..416684)	Theileria orientalis strain Shintoku	20716283
TOT_040000194	CDS	TOT_040000194	NC_025263.1	416821	417911	D	50S ribosomal protein L3	join(416821..417083,417131..417911)	Theileria orientalis strain Shintoku	20716284
TOT_040000195	CDS	TOT_040000195	NC_025263.1	418022	419399	D	GTP-binding protein/GTPase	join(418022..418245,418282..419114,419146..419399)	Theileria orientalis strain Shintoku	20716285
TOT_040000196	CDS	TOT_040000196	NC_025263.1	419700	422507	R	vacuolar H+-ATPase subunit	complement(join(419700..420171,420223..422507))	Theileria orientalis strain Shintoku	20716286
TOT_040000197	CDS	TOT_040000197	NC_025263.1	422981	424224	R	conserved hypothetical protein	complement(join(422981..423150,423201..423270,423300..423335,423375..423620,423655..424224))	Theileria orientalis strain Shintoku	20716287
TOT_040000198	CDS	TOT_040000198	NC_025263.1	424481	425850	D	YEATS family protein; uncharacterized protein	join(424481..424561,424619..424903,424935..425085,425117..425232,425269..425347,425478..425697,425748..425850)	Theileria orientalis strain Shintoku	20716288
TOT_040000199	CDS	TOT_040000199	NC_025263.1	425836	428678	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(425836..425865,426049..426336,426469..428519,428555..428678))	Theileria orientalis strain Shintoku	20716289
TOT_040000200	CDS	TOT_040000200	NC_025263.1	428883	430175	D	conserved hypothetical protein	join(428883..429210,429349..429804,429835..430175)	Theileria orientalis strain Shintoku	20716290
TOT_040000897	CDS	TOT_040000897	NC_025263.1	430521	431912	D	sodium transporter	430521..431912	Theileria orientalis strain Shintoku	20716924
TOT_040000201	CDS	TOT_040000201	NC_025263.1	432058	432433	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(432058..432105,432135..432212,432296..432433))	Theileria orientalis strain Shintoku	20716291
TOT_040000202	CDS	TOT_040000202	NC_025263.1	432724	433962	R	conserved hypothetical protein	complement(join(432724..432778,432810..432958,432998..433063,433102..433962))	Theileria orientalis strain Shintoku	20716292
TOT_040000203	CDS	TOT_040000203	NC_025263.1	434384	435238	D	conserved hypothetical protein	join(434384..434553,434587..434725,434757..434865,434896..435031,435097..435238)	Theileria orientalis strain Shintoku	20716293
TOT_040000204	CDS	TOT_040000204	NC_025263.1	435548	436476	R	conserved hypothetical protein	complement(join(435548..435716,435749..436476))	Theileria orientalis strain Shintoku	20716294
TOT_040000205	CDS	TOT_040000205	NC_025263.1	436878	438577	D	branched-chain alpha-keto acid dehydrogenase E1	join(436878..437265,437332..437431,437461..437523,437555..437905,437937..438041,438076..438167,438213..438394,438494..438577)	Theileria orientalis strain Shintoku	20716295
TOT_040000206	CDS	TOT_040000206	NC_025263.1	438725	440206	R	t-SNARE domain containing protein; uncharacterized protein	complement(join(438725..438764,438969..440206))	Theileria orientalis strain Shintoku	20716296
TOT_040000207	CDS	TOT_040000207	NC_025263.1	440397	441236	D	GCN5-related N-acetyltransferase domain containing protein; uncharacterized protein	join(440397..440640,440672..440854,440995..441236)	Theileria orientalis strain Shintoku	20716297
TOT_040000208	CDS	TOT_040000208	NC_025263.1	441408	444409	R	tRNA-splicing endonuclease	complement(join(441408..441473,441538..441692,441807..441902,442053..443126,443373..444099,444131..444409))	Theileria orientalis strain Shintoku	20716298
TOT_040000209	CDS	TOT_040000209	NC_025263.1	444666	445362	D	GYF domain containing protein; uncharacterized protein	join(444666..444746,444776..444919,444961..445362)	Theileria orientalis strain Shintoku	20716299
TOT_040000210	CDS	TOT_040000210	NC_025263.1	445505	447897	R	vacuolar H+-ATPase, a subunit	complement(join(445505..445689,445809..446309,446456..446840,446955..447065,447096..447273,447305..447561,447684..447784,447840..447897))	Theileria orientalis strain Shintoku	20716300
TOT_040000211	CDS	TOT_040000211	NC_025263.1	448668	450018	D	conserved hypothetical protein	join(448668..449532,449699..450018)	Theileria orientalis strain Shintoku	20716301
TOT_040000212	CDS	TOT_040000212	NC_025263.1	450101	450575	R	cytochrome C	complement(join(450101..450266,450305..450440,450548..450575))	Theileria orientalis strain Shintoku	20716302
TOT_040000213	CDS	TOT_040000213	NC_025263.1	450853	451203	R	60S ribosomal protein P1	complement(450853..451203)	Theileria orientalis strain Shintoku	20716303
TOT_040000926	CDS	TOT_040000926	NC_025263.1	451786	453696	R	DNA/RNA helicase, DEAD/DEAH box type, N-terminal domain containing protein; uncharacterized protein	complement(join(451786..451875,451911..452132,452165..452283,452319..452410,452447..452583,452617..452687,452721..452808,452843..452900,452933..453696))	Theileria orientalis strain Shintoku	20716946
TOT_040000927	CDS	TOT_040000927	NC_025263.1	454505	457810	R	conserved hypothetical protein	complement(454505..457810)	Theileria orientalis strain Shintoku	20716947
TOT_040000216	CDS	TOT_040000216	NC_025263.1	457931	462424	R	conserved hypothetical protein	complement(join(457931..458129,458161..458277,458308..458504,458534..458932,459080..459275,459307..459500,459533..460116,460206..460495,460527..460619,460663..460815,460851..461369,461403..461640,461670..461830,461863..462112,462145..462424))	Theileria orientalis strain Shintoku	20716304
TOT_040000217	CDS	TOT_040000217	NC_025263.1	462601	463440	R	Maf-like protein family protein; uncharacterized protein	complement(join(462601..462743,462776..463046,463090..463440))	Theileria orientalis strain Shintoku	20716305
TOT_040000218	CDS	TOT_040000218	NC_025263.1	463477	469647	R	conserved hypothetical protein	complement(join(463477..463698,463854..464174,464520..464737,464975..466207,466265..466979,467073..468413,468462..469123,469189..469489,469522..469647))	Theileria orientalis strain Shintoku	20716306
TOT_040000219	CDS	TOT_040000219	NC_025263.1	469743	470788	R	conserved hypothetical protein	complement(join(469743..469777,469957..470788))	Theileria orientalis strain Shintoku	20716307
TOT_040000220	CDS	TOT_040000220	NC_025263.1	471018	472383	R	enolase	complement(join(471018..472306,472344..472383))	Theileria orientalis strain Shintoku	20716308
TOT_040000221	CDS	TOT_040000221	NC_025263.1	472704	473896	D	predicted protein	join(472704..472736,472768..472921,472953..473024,473055..473125,473157..473299,473330..473426,473458..473685,473738..473896)	Theileria orientalis strain Shintoku	20716309
TOT_040000222	CDS	TOT_040000222	NC_025263.1	473963	476178	D	BSD domain containing protein; uncharacterized protein	join(473963..474161,474201..474581,474613..474978,475016..475210,475292..475344,475383..475595,475652..475742,475856..476016,476047..476178)	Theileria orientalis strain Shintoku	20716310
TOT_040000928	CDS	TOT_040000928	NC_025263.1	476329	478662	R	SART-1 protein family protein; uncharacterized protein	complement(join(476329..476447,476618..476714,476756..476890,477018..477166,477309..477397,477575..478662))	Theileria orientalis strain Shintoku	20716948
TOT_040000224	CDS	TOT_040000224	NC_025263.1	479045	480181	D	conserved hypothetical protein	join(479045..479607,479637..479860,479891..480066,480098..480181)	Theileria orientalis strain Shintoku	20716311
TOT_040000225	CDS	TOT_040000225	NC_025263.1	480329	482320	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(480329..480413,480721..481862,481910..482320)	Theileria orientalis strain Shintoku	20716312
TOT_040000226	CDS	TOT_040000226	NC_025263.1	482435	483151	R	conserved hypothetical protein	complement(join(482435..482854,482885..483151))	Theileria orientalis strain Shintoku	20716313
TOT_040000227	CDS	TOT_040000227	NC_025263.1	483902	488644	D	conserved hypothetical protein	join(483902..485076,485116..488644)	Theileria orientalis strain Shintoku	20716314
TOT_040000228	CDS	TOT_040000228	NC_025263.1	488693	489974	D	conserved hypothetical protein	join(488693..488793,488824..489878,489952..489974)	Theileria orientalis strain Shintoku	20716315
TOT_040000229	CDS	TOT_040000229	NC_025263.1	490007	490317	R	hypothetical protein	complement(join(490007..490034,490068..490120,490153..490317))	Theileria orientalis strain Shintoku	20716316
TOT_040000230	CDS	TOT_040000230	NC_025263.1	490604	491643	R	phosphoglycerate mutase	complement(join(490604..490654,490696..490859,490950..491239,491323..491463,491495..491576,491613..491643))	Theileria orientalis strain Shintoku	20716317
TOT_040000231	CDS	TOT_040000231	NC_025263.1	492350	493403	D	GCN5-related N-acetyltransferase domain containing protein; uncharacterized protein	join(492350..493277,493360..493403)	Theileria orientalis strain Shintoku	20716318
TOT_040000232	CDS	TOT_040000232	NC_025263.1	493592	495630	D	Pbj2	join(493592..494015,494139..494548,494582..494765,494872..494942,494977..495186,495373..495471,495502..495630)	Theileria orientalis strain Shintoku	20716319
TOT_040000233	CDS	TOT_040000233	NC_025263.1	495687	497135	D	tetratricopeptide-like helical domain containing protein; uncharacterized protein	join(495687..495789,495822..495910,495993..496237,496272..496530,496567..496612,496666..496952,496995..497135)	Theileria orientalis strain Shintoku	20716320
TOT_040000234	CDS	TOT_040000234	NC_025263.1	497419	499613	R	conserved hypothetical protein	complement(join(497419..497539,497570..497815,497864..497943,498073..498123,498188..498463,498519..498574,498609..498706,498791..498942,498947..499064,499095..499189,499220..499257,499412..499613))	Theileria orientalis strain Shintoku	20716321
TOT_040000235	CDS	TOT_040000235	NC_025263.1	499966	500274	D	conserved hypothetical protein	499966..500274	Theileria orientalis strain Shintoku	20716322
TOT_040000236	CDS	TOT_040000236	NC_025263.1	500884	503095	D	heat-shock protein HSP70	join(500884..500983,501022..501171,501384..503095)	Theileria orientalis strain Shintoku	20716323
TOT_040000929	CDS	TOT_040000929	NC_025263.1	503501	504766	D	Os03g0762000 protein; uncharacterized protein	503501..504766	Theileria orientalis strain Shintoku	20716949
TOT_040000930	CDS	TOT_040000930	NC_025263.1	505043	506112	D	succinyl-CoA ligase [GDP-forming] alpha-chain, mitochondrial	join(505043..505057,505104..505241,505297..505771,505804..505935,505973..506112)	Theileria orientalis strain Shintoku	20716950
TOT_040000239	CDS	TOT_040000239	NC_025263.1	506179	507772	D	SJCHGC04301 protein; uncharacterized protein	join(506179..506455,506491..506718,506819..507015,507091..507471,507506..507772)	Theileria orientalis strain Shintoku	20716324
TOT_040000931	CDS	TOT_040000931	NC_025263.1	508539	509509	D	conserved hypothetical protein	join(508539..508581,508612..508739,508931..509509)	Theileria orientalis strain Shintoku	20716951
TOT_040000241	CDS	TOT_040000241	NC_025263.1	509775	511816	R	RuvB-like DNA repair helicase	complement(join(509775..510140,510340..510588,510627..510787,510976..511116,511185..511448,511513..511816))	Theileria orientalis strain Shintoku	20716325
TOT_040000242	CDS	TOT_040000242	NC_025263.1	512173	515782	D	peptidase C2, calpain family protein; uncharacterized protein	join(512173..513202,513378..513550,513704..514409,514521..515310,515416..515782)	Theileria orientalis strain Shintoku	20716326
TOT_040000243	CDS	TOT_040000243	NC_025263.1	515994	529699	R	DNA polymerase III clamp loader subunit, C-terminal domain containing protein; uncharacterized protein	complement(join(515994..516981,517045..518515,518742..520926,521191..521491,521570..523678,523801..523892,523979..524698,524967..525297,525504..528049,528243..528528,528591..528719,528794..528962,528992..529120,529152..529538,529582..529699))	Theileria orientalis strain Shintoku	20716327
TOT_040000244	CDS	TOT_040000244	NC_025263.1	530107	531672	D	PRL1 protein	530107..531672	Theileria orientalis strain Shintoku	20716328
TOT_040000245	CDS	TOT_040000245	NC_025263.1	531941	532468	R	conserved hypothetical protein	complement(531941..532468)	Theileria orientalis strain Shintoku	20716329
TOT_040000932	CDS	TOT_040000932	NC_025263.1	533171	533579	D	Rab5-interacting family protein; uncharacterized protein	join(533171..533230,533265..533492,533535..533579)	Theileria orientalis strain Shintoku	20716952
TOT_040000247	CDS	TOT_040000247	NC_025263.1	534291	536123	R	K Homology, type 1 domain containing protein; uncharacterized protein	complement(join(534291..535159,535437..535778,535888..535962,535994..536123))	Theileria orientalis strain Shintoku	20716330
TOT_040000248	CDS	TOT_040000248	NC_025263.1	536338	539412	R	HCNGP-like family protein; uncharacterized protein	complement(join(536338..536402,536671..536850,536940..537018,537279..537395,537435..537533,537765..537860,537936..538131,538180..538367,538635..538905,538937..539120,539160..539273,539316..539412))	Theileria orientalis strain Shintoku	20716331
TOT_040000249	CDS	TOT_040000249	NC_025263.1	539598	539947	R	RING-box protein 1a	complement(join(539598..539768,539804..539947))	Theileria orientalis strain Shintoku	20716332
TOT_040000250	CDS	TOT_040000250	NC_025263.1	540169	541434	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(540169..540558,540589..541434)	Theileria orientalis strain Shintoku	20716333
TOT_040000251	CDS	TOT_040000251	NC_025263.1	541441	542887	D	conserved hypothetical protein	join(541441..541607,541648..541737,541796..541862,541897..541948,541980..542028,542219..542273,542780..542887)	Theileria orientalis strain Shintoku	20716334
TOT_040000252	CDS	TOT_040000252	NC_025263.1	543231	545568	D	calcium-binding EF-hand domain containing protein; uncharacterized protein	join(543231..543886,543918..544113,544144..544285,544329..544386,544446..544549,544585..544777,544820..544889,545084..545219,545263..545430,545462..545568)	Theileria orientalis strain Shintoku	20716335
TOT_040000253	CDS	TOT_040000253	NC_025263.1	545996	547763	D	histone H4	join(545996..546302,546685..546950,546981..547133,547163..547225,547256..547420,547452..547763)	Theileria orientalis strain Shintoku	20716336
TOT_040000254	CDS	TOT_040000254	NC_025263.1	548087	548398	D	histone H4	548087..548398	Theileria orientalis strain Shintoku	20716337
TOT_040000255	CDS	TOT_040000255	NC_025263.1	548584	550122	R	protein kinase	complement(548584..550122)	Theileria orientalis strain Shintoku	20716338
TOT_040000256	CDS	TOT_040000256	NC_025263.1	551203	551946	R	centrin	complement(join(551203..551342,551382..551426,551485..551632,551668..551946))	Theileria orientalis strain Shintoku	20716339
TOT_040000257	CDS	TOT_040000257	NC_025263.1	552671	553556	D	40S ribosomal protein S4	join(552671..552673,552774..553556)	Theileria orientalis strain Shintoku	20716340
TOT_040000258	CDS	TOT_040000258	NC_025263.1	553839	554805	R	calcium-binding EF-hand domain containing protein; uncharacterized protein	complement(join(553839..553996,554028..554192,554223..554283,554314..554805))	Theileria orientalis strain Shintoku	20716341
TOT_040000259	CDS	TOT_040000259	NC_025263.1	554962	556404	R	conserved hypothetical protein	complement(554962..556404)	Theileria orientalis strain Shintoku	20716342
TOT_040000260	CDS	TOT_040000260	NC_025263.1	557588	557818	R	hypothetical protein	complement(join(557588..557734,557783..557818))	Theileria orientalis strain Shintoku	20716343
TOT_040000261	CDS	TOT_040000261	NC_025263.1	557906	559396	R	conserved hypothetical protein	complement(557906..559396)	Theileria orientalis strain Shintoku	20716344
TOT_040000262	CDS	TOT_040000262	NC_025263.1	560446	563289	R	conserved hypothetical protein	complement(560446..563289)	Theileria orientalis strain Shintoku	20716345
TOT_040000263	CDS	TOT_040000263	NC_025263.1	564491	566041	R	conserved hypothetical protein	complement(564491..566041)	Theileria orientalis strain Shintoku	20716346
TOT_040000933	CDS	TOT_040000933	NC_025263.1	567146	568537	R	conserved hypothetical protein	complement(567146..568537)	Theileria orientalis strain Shintoku	20716953
TOT_040000265	CDS	TOT_040000265	NC_025263.1	569470	571980	D	conserved hypothetical protein	join(569470..569776,569852..569996,570026..570399,570459..570562,570595..570661,570730..570815,570846..571412,571497..571557,571592..571772,571893..571980)	Theileria orientalis strain Shintoku	20716347
TOT_040000266	CDS	TOT_040000266	NC_025263.1	572689	574110	R	conserved hypothetical protein	complement(572689..574110)	Theileria orientalis strain Shintoku	20716348
TOT_040000267	CDS	TOT_040000267	NC_025263.1	574724	576507	R	conserved hypothetical protein	complement(join(574724..574967,574988..576016,576326..576507))	Theileria orientalis strain Shintoku	20716349
TOT_040000268	CDS	TOT_040000268	NC_025263.1	576741	578228	R	conserved hypothetical protein	complement(576741..578228)	Theileria orientalis strain Shintoku	20716350
TOT_040000269	CDS	TOT_040000269	NC_025263.1	578638	580230	R	conserved hypothetical protein	complement(join(578638..578733,578851..580230))	Theileria orientalis strain Shintoku	20716351
TOT_040000270	CDS	TOT_040000270	NC_025263.1	580875	583206	D	DEAD-box family helicase	join(580875..581172,581202..582072,582186..583206)	Theileria orientalis strain Shintoku	20716352
TOT_040000271	CDS	TOT_040000271	NC_025263.1	583456	583728	D	hypothetical protein	583456..583728	Theileria orientalis strain Shintoku	20716353
TOT_040000272	CDS	TOT_040000272	NC_025263.1	583796	585322	R	conserved hypothetical protein	complement(583796..585322)	Theileria orientalis strain Shintoku	20716354
TOT_040000273	CDS	TOT_040000273	NC_025263.1	589154	592138	D	conserved hypothetical protein	589154..592138	Theileria orientalis strain Shintoku	20716355
TOT_040000274	CDS	TOT_040000274	NC_025263.1	592181	594556	D	conserved hypothetical protein	join(592181..594303,594475..594556)	Theileria orientalis strain Shintoku	20716356
TOT_040000275	CDS	TOT_040000275	NC_025263.1	595205	599752	D	ABC transporter related domain containing protein; uncharacterized protein	595205..599752	Theileria orientalis strain Shintoku	20716357
TOT_040000276	CDS	TOT_040000276	NC_025263.1	601402	604185	D	conserved hypothetical protein	601402..604185	Theileria orientalis strain Shintoku	20716358
TOT_040000277	CDS	TOT_040000277	NC_025263.1	604279	604521	R	zinc finger, AN1-type domain containing protein; uncharacterized protein	complement(604279..604521)	Theileria orientalis strain Shintoku	20716359
TOT_040000934	CDS	TOT_040000934	NC_025263.1	604618	604984	R	conserved hypothetical protein	complement(join(604618..604682,604714..604984))	Theileria orientalis strain Shintoku	20716954
TOT_040000935	CDS	TOT_040000935	NC_025263.1	605251	606011	R	conserved hypothetical protein	complement(join(605251..605611,605674..606011))	Theileria orientalis strain Shintoku	20716955
TOT_040000936	CDS	TOT_040000936	NC_025263.1	606043	607091	R	conserved hypothetical protein	complement(join(606043..606282,606345..607091))	Theileria orientalis strain Shintoku	20716956
TOT_040000281	CDS	TOT_040000281	NC_025263.1	607121	608255	R	30S ribosomal protein S15	complement(join(607121..607145,607233..607415,607446..607495,607536..607679,607711..607919,607952..608255))	Theileria orientalis strain Shintoku	20716360
TOT_040000282	CDS	TOT_040000282	NC_025263.1	608622	610307	D	conserved hypothetical protein	join(608622..610083,610198..610307)	Theileria orientalis strain Shintoku	20716361
TOT_040000937	CDS	TOT_040000937	NC_025263.1	610533	616512	R	DNA-directed RNA polymerase III largest subunit RPC1	complement(join(610533..610865,611010..611339,611456..612567,612729..612954,613137..614851,614950..615133,615165..615248,615361..615483,615521..615699,615808..616053,616113..616512))	Theileria orientalis strain Shintoku	20716957
TOT_040000284	CDS	TOT_040000284	NC_025263.1	616721	619298	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(616721..617694,617924..619298))	Theileria orientalis strain Shintoku	20716362
TOT_040000285	CDS	TOT_040000285	NC_025263.1	619569	623035	R	heat shock protein HSP90	complement(join(619569..621053,621380..621577,621926..622243,622313..623035))	Theileria orientalis strain Shintoku	20716363
TOT_040000286	CDS	TOT_040000286	NC_025263.1	623438	626549	D	serine/threonine protein kinase	join(623438..624204,624301..625613,625648..625731,625764..625888,626053..626112,626352..626549)	Theileria orientalis strain Shintoku	20716364
TOT_040000287	CDS	TOT_040000287	NC_025263.1	626720	627886	R	Rab GTPase	complement(join(626720..626763,626797..626852,627086..627126,627156..627224,627254..627385,627417..627512,627543..627590,627623..627670,627702..627774,627861..627886))	Theileria orientalis strain Shintoku	20716365
TOT_040000288	CDS	TOT_040000288	NC_025263.1	629127	630421	D	zinc finger, GATA-type domain containing protein; uncharacterized protein	join(629127..629970,630003..630421)	Theileria orientalis strain Shintoku	20716366
TOT_040000289	CDS	TOT_040000289	NC_025263.1	631007	633277	D	conserved hypothetical protein	join(631007..631873,631952..632075,632330..632544,632579..633277)	Theileria orientalis strain Shintoku	20716367
TOT_040000290	CDS	TOT_040000290	NC_025263.1	633281	633741	R	PIG-P domain containing protein; uncharacterized protein	complement(join(633281..633390,633425..633543,633581..633653,633687..633741))	Theileria orientalis strain Shintoku	20716368
TOT_040000291	CDS	TOT_040000291	NC_025263.1	633850	636096	D	vacuolar protein sorting/secretion protein	633850..636096	Theileria orientalis strain Shintoku	20716369
TOT_040000292	CDS	TOT_040000292	NC_025263.1	636267	636490	R	conserved hypothetical protein	complement(join(636267..636323,636356..636490))	Theileria orientalis strain Shintoku	20716370
TOT_040000293	CDS	TOT_040000293	NC_025263.1	636597	638330	D	D123 family protein; uncharacterized protein	join(636597..636885,636921..637501,637540..637634,637751..638330)	Theileria orientalis strain Shintoku	20716371
TOT_040000294	CDS	TOT_040000294	NC_025263.1	638521	639098	R	HesB/YadR/YfhF family protein; uncharacterized protein	complement(join(638521..638792,638897..639098))	Theileria orientalis strain Shintoku	20716372
TOT_040000295	CDS	TOT_040000295	NC_025263.1	639205	639768	R	conserved hypothetical protein	complement(639205..639768)	Theileria orientalis strain Shintoku	20716373
TOT_040000296	CDS	TOT_040000296	NC_025263.1	640193	640769	D	conserved hypothetical protein	join(640193..640486,640522..640598,640628..640769)	Theileria orientalis strain Shintoku	20716374
TOT_040000297	CDS	TOT_040000297	NC_025263.1	640891	641667	D	conserved hypothetical protein	640891..641667	Theileria orientalis strain Shintoku	20716375
TOT_040000938	CDS	TOT_040000938	NC_025263.1	641911	645066	R	replication factor C	complement(join(641911..642399,642512..642630,642719..642862,642981..643217,643347..643591,643692..643922,643955..644316,644347..644527,644561..645066))	Theileria orientalis strain Shintoku	20716958
TOT_040000939	CDS	TOT_040000939	NC_025263.1	645277	646455	R	phosphatidic acid phosphatase type 2-like family protein; uncharacterized protein	complement(645277..646455)	Theileria orientalis strain Shintoku	20716959
TOT_040000300	CDS	TOT_040000300	NC_025263.1	646753	647925	R	phosphatidic acid phosphatase type 2-like family protein; uncharacterized protein	complement(646753..647925)	Theileria orientalis strain Shintoku	20716376
TOT_040000301	CDS	TOT_040000301	NC_025263.1	648493	649677	R	phosphatidic acid phosphatase type 2-like family protein; uncharacterized protein	complement(648493..649677)	Theileria orientalis strain Shintoku	20716377
TOT_040000940	CDS	TOT_040000940	NC_025263.1	650351	651376	D	mitochondrial substrate carrier family protein; uncharacterized protein	650351..651376	Theileria orientalis strain Shintoku	20716960
TOT_040000303	CDS	TOT_040000303	NC_025263.1	651750	652421	D	conserved hypothetical protein	join(651750..652193,652230..652421)	Theileria orientalis strain Shintoku	20716378
TOT_040000304	CDS	TOT_040000304	NC_025263.1	652575	656654	D	PA14 domain containing protein; uncharacterized protein	join(652575..653091,653120..653203,653252..653363,653400..653606,653663..653820,653882..653935,653965..654018,654051..654228,654313..654405,654434..654915,654948..655097,655168..655284,655332..655420,655518..656031,656171..656283,656364..656654)	Theileria orientalis strain Shintoku	20716379
TOT_040000305	CDS	TOT_040000305	NC_025263.1	656807	657619	D	mRNA cleavage factor subunit	join(656807..657328,657464..657619)	Theileria orientalis strain Shintoku	20716380
TOT_040000941	CDS	TOT_040000941	NC_025263.1	657815	658782	D	conserved hypothetical protein	join(657815..657903,657960..658017,658119..658209,658274..658327,658361..658404,658437..658568,658663..658782)	Theileria orientalis strain Shintoku	20716961
TOT_040000307	CDS	TOT_040000307	NC_025263.1	659455	660015	D	acetyltransferase	join(659455..659644,659738..660015)	Theileria orientalis strain Shintoku	20716381
TOT_040000308	CDS	TOT_040000308	NC_025263.1	660196	660661	D	tubulin binding cofactor A family protein; uncharacterized protein	join(660196..660327,660398..660661)	Theileria orientalis strain Shintoku	20716382
TOT_040000309	CDS	TOT_040000309	NC_025263.1	660722	661263	R	hypothetical protein	complement(join(660722..660801,660957..661263))	Theileria orientalis strain Shintoku	20716383
TOT_040000310	CDS	TOT_040000310	NC_025263.1	661505	663540	R	phenylalanyl-tRNA synthetase	complement(join(661505..661837,661874..661966,662031..662124,662217..662326,662450..662557,662658..663197,663253..663540))	Theileria orientalis strain Shintoku	20716384
TOT_040000311	CDS	TOT_040000311	NC_025263.1	663911	667171	R	DNA repair exonuclease family protein; uncharacterized protein	complement(join(663911..664081,664125..664214,664241..664356,664469..664691,664987..665541,665574..665632,665806..666005,666147..666888,666961..667171))	Theileria orientalis strain Shintoku	20716385
TOT_040000942	CDS	TOT_040000942	NC_025263.1	667720	669528	D	isocitrate dehydrogenase	join(667720..667974,668040..668117,668181..668268,668352..668576,668643..669012,669045..669156,669274..669528)	Theileria orientalis strain Shintoku	20716962
TOT_040000313	CDS	TOT_040000313	NC_025263.1	669784	671709	R	conserved hypothetical protein	complement(669784..671709)	Theileria orientalis strain Shintoku	20716386
TOT_040000943	CDS	TOT_040000943	NC_025263.1	672116	672910	R	proteasome subunit beta type	complement(join(672116..672259,672299..672581,672618..672808,672908..672910))	Theileria orientalis strain Shintoku	20716963
TOT_040000315	CDS	TOT_040000315	NC_025263.1	673195	674061	R	conserved hypothetical protein	complement(join(673195..673305,673375..673692,673819..674061))	Theileria orientalis strain Shintoku	20716387
TOT_040000316	CDS	TOT_040000316	NC_025263.1	674901	675379	D	conserved hypothetical protein	join(674901..675033,675066..675187,675254..675379)	Theileria orientalis strain Shintoku	20716388
TOT_040000317	CDS	TOT_040000317	NC_025263.1	675529	676642	D	N-acetylglucosaminylphosphatidylinositol deacetylase family protein; uncharacterized protein	join(675529..675790,675856..676102,676145..676359,676392..676642)	Theileria orientalis strain Shintoku	20716389
TOT_040000319	CDS	TOT_040000319	NC_025263.1	680503	684821	R	SWI/SNF-related chromatin remodelling factor	complement(join(680503..680545,680554..680685,680929..682190,682371..682462,682537..682929,683192..683437,683597..683848,683912..684404,684726..684821))	Theileria orientalis strain Shintoku	20716390
TOT_040000320	CDS	TOT_040000320	NC_025263.1	685410	687436	R	translation elongation factor 1-alpha	complement(join(685410..685544,685611..685906,686010..686364,686486..687436))	Theileria orientalis strain Shintoku	20716391
TOT_040000321	CDS	TOT_040000321	NC_025263.1	687946	689876	D	nucleolar, Nop52 family protein; uncharacterized protein	join(687946..689528,689756..689876)	Theileria orientalis strain Shintoku	20716392
TOT_040000322	CDS	TOT_040000322	NC_025263.1	690048	690590	R	NifU domain-containing protein; uncharacterized protein	complement(join(690048..690220,690422..690590))	Theileria orientalis strain Shintoku	20716393
TOT_040000323	CDS	TOT_040000323	NC_025263.1	691324	694077	D	ankyrin repeat containing protein	join(691324..692483,692559..693438,693607..694077)	Theileria orientalis strain Shintoku	20716394
TOT_040000324	CDS	TOT_040000324	NC_025263.1	694319	696281	D	galactose oxidase/kelch, beta-propeller domain containing protein; uncharacterized protein	join(694319..694545,694577..694735,694860..695010,695070..695256,695341..695414,695445..695550,695628..695751,695782..695819,695888..696053,696083..696281)	Theileria orientalis strain Shintoku	20716395
TOT_040000325	CDS	TOT_040000325	NC_025263.1	696597	698337	D	pyruvate kinase	join(696597..696786,696983..698337)	Theileria orientalis strain Shintoku	20716396
TOT_040000944	CDS	TOT_040000944	NC_025263.1	698692	700283	D	Short-chain dehydrogenase/reductase SDR family protein; uncharacterized protein	join(698692..698782,698852..699061,699185..699320,699379..699777,699834..699995,700130..700283)	Theileria orientalis strain Shintoku	20716964
TOT_040000945	CDS	TOT_040000945	NC_025263.1	700741	702006	D	Short-chain dehydrogenase/reductase SDR family protein; uncharacterized protein	join(700741..700786,700910..701045,701109..701471,701588..701749,701853..702006)	Theileria orientalis strain Shintoku	20716965
TOT_040000946	CDS	TOT_040000946	NC_025263.1	702208	703718	D	Short-chain dehydrogenase/reductase SDR family protein; uncharacterized protein	join(702208..702553,702677..702812,702876..703274,703349..703510,703565..703718)	Theileria orientalis strain Shintoku	20716966
TOT_040000947	CDS	TOT_040000947	NC_025263.1	703831	704939	D	conserved hypothetical protein	join(703831..704288,704407..704533,704600..704743,704775..704939)	Theileria orientalis strain Shintoku	20716967
TOT_040000328	CDS	TOT_040000328	NC_025263.1	705064	706454	R	conserved hypothetical protein	complement(join(705064..705465,705642..706454))	Theileria orientalis strain Shintoku	20716397
TOT_040000329	CDS	TOT_040000329	NC_025263.1	707070	707468	D	hypothetical protein	join(707070..707164,707414..707468)	Theileria orientalis strain Shintoku	20716398
TOT_040000330	CDS	TOT_040000330	NC_025263.1	707503	709003	D	conserved hypothetical protein	join(707503..708850,708993..709003)	Theileria orientalis strain Shintoku	20716399
TOT_040000331	CDS	TOT_040000331	NC_025263.1	709051	709453	R	conserved hypothetical protein	complement(join(709051..709104,709164..709287,709335..709453))	Theileria orientalis strain Shintoku	20716400
TOT_040000332	CDS	TOT_040000332	NC_025263.1	710267	712825	D	conserved hypothetical protein	join(710267..711501,711658..711929,712032..712619,712728..712825)	Theileria orientalis strain Shintoku	20716401
TOT_040000333	CDS	TOT_040000333	NC_025263.1	712962	715716	D	papain-family cysteine protease	join(712962..713957,714041..714147,714218..714402,714485..714633,714709..714869,714937..715066,715168..715210,715284..715430,715529..715716)	Theileria orientalis strain Shintoku	20716402
TOT_040000334	CDS	TOT_040000334	NC_025263.1	715992	716375	R	HesB/YadR/YfhF family protein; uncharacterized protein	complement(715992..716375)	Theileria orientalis strain Shintoku	20716403
TOT_040000335	CDS	TOT_040000335	NC_025263.1	716376	717333	R	conserved hypothetical protein	complement(join(716376..716422,716437..716708,716739..717147,717237..717333))	Theileria orientalis strain Shintoku	20716404
TOT_040000336	CDS	TOT_040000336	NC_025263.1	717866	726051	D	conserved hypothetical protein	join(717866..719356,719411..719803,720146..720873,720928..721198,721259..721360,721733..723204,723244..724053,724215..724294,724381..724697,724860..725252,725385..725471,725692..725881,725963..726051)	Theileria orientalis strain Shintoku	20716405
TOT_040000337	CDS	TOT_040000337	NC_025263.1	726811	729593	D	cullin family protein; uncharacterized protein	join(726811..726878,726908..726997,727029..727152,727222..727386,727401..727700,727815..727979,728035..728176,728264..728848,728878..729221,729318..729593)	Theileria orientalis strain Shintoku	20716406
TOT_040000338	CDS	TOT_040000338	NC_025263.1	729699	730822	R	mitochondrial carrier protein	complement(join(729699..729737,729875..730822))	Theileria orientalis strain Shintoku	20716407
TOT_040000339	CDS	TOT_040000339	NC_025263.1	731115	735681	D	leucyl-tRNA synthetase	join(731115..731367,731399..731622,731653..732309,732393..732872,733047..733294,733502..734236,734297..734372,734466..734685,734809..734947,735077..735196,735357..735681)	Theileria orientalis strain Shintoku	20716408
TOT_040000340	CDS	TOT_040000340	NC_025263.1	736096	737469	R	conserved hypothetical protein	complement(join(736096..736266,736330..737469))	Theileria orientalis strain Shintoku	20716409
TOT_040000341	CDS	TOT_040000341	NC_025263.1	737976	742189	D	Osjnba0088k19.13 protein; uncharacterized protein	join(737976..738252,738354..738622,738658..739759,739854..740028,740234..740419,740731..741059,741204..741399,742102..742189)	Theileria orientalis strain Shintoku	20716410
TOT_040000342	CDS	TOT_040000342	NC_025263.1	742191	747127	R	S1, RNA binding domain containing protein; uncharacterized protein	complement(join(742191..742197,742365..742454,742574..743199,743231..743353,743385..744036,744192..744958,744996..745055,745142..745356,745395..746274,746663..746719,746873..747127))	Theileria orientalis strain Shintoku	20716411
TOT_040000948	CDS	TOT_040000948	NC_025263.1	747557	747813	R	conserved hypothetical protein	complement(join(747557..747628,747661..747813))	Theileria orientalis strain Shintoku	20716968
TOT_040000949	CDS	TOT_040000949	NC_025263.1	748608	748772	D	conserved hypothetical protein	748608..748772	Theileria orientalis strain Shintoku	20716969
TOT_040000950	CDS	TOT_040000950	NC_025263.1	749151	750380	R	mRNA turnover/deadenylation component	complement(749151..750380)	Theileria orientalis strain Shintoku	20716970
TOT_040000346	CDS	TOT_040000346	NC_025263.1	751357	751796	D	conserved hypothetical protein	join(751357..751524,751605..751796)	Theileria orientalis strain Shintoku	20716412
TOT_040000347	CDS	TOT_040000347	NC_025263.1	752114	754544	R	conserved hypothetical protein	complement(join(752114..752428,752596..753413,753588..754209,754263..754339,754400..754544))	Theileria orientalis strain Shintoku	20716413
TOT_040000348	CDS	TOT_040000348	NC_025263.1	755016	755879	D	cyclin	join(755016..755154,755194..755309,755362..755435,755467..755564,755597..755700,755730..755879)	Theileria orientalis strain Shintoku	20716414
TOT_040000349	CDS	TOT_040000349	NC_025263.1	756565	758324	R	conserved hypothetical protein	complement(join(756565..756860,756890..757335,757367..757914,757947..758324))	Theileria orientalis strain Shintoku	20716415
TOT_040000350	CDS	TOT_040000350	NC_025263.1	758897	759715	D	small GTPase	758897..759715	Theileria orientalis strain Shintoku	20716416
TOT_040000351	CDS	TOT_040000351	NC_025263.1	759986	763343	R	conserved hypothetical protein	complement(join(759986..760428,760512..760623,760665..760795,760836..761062,761086..761157,761224..761456,761507..761715,761775..761823,761887..762020,762053..762126,762187..762298,762369..762521,762587..762797,762869..762976,763104..763343))	Theileria orientalis strain Shintoku	20716417
TOT_040000352	CDS	TOT_040000352	NC_025263.1	764061	764213	R	hypothetical protein	complement(764061..764213)	Theileria orientalis strain Shintoku	20716418
TOT_040000353	CDS	TOT_040000353	NC_025263.1	764239	769922	D	zinc finger, PHD-type domain containing protein; uncharacterized protein	join(764239..765169,765242..765684,765793..766747,767024..769152,769323..769444,769532..769922)	Theileria orientalis strain Shintoku	20716419
TOT_040000354	CDS	TOT_040000354	NC_025263.1	770184	773181	D	valyl-tRNA synthetase, class Ia family protein; uncharacterized protein	join(770184..770505,770576..773181)	Theileria orientalis strain Shintoku	20716420
TOT_040000355	CDS	TOT_040000355	NC_025263.1	773326	773469	D	hypothetical protein	773326..773469	Theileria orientalis strain Shintoku	20716421
TOT_040000356	CDS	TOT_040000356	NC_025263.1	773529	776363	R	phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein; uncharacterized protein	complement(join(773529..774128,774365..775002,775150..775533,775671..775962,776001..776041,776231..776363))	Theileria orientalis strain Shintoku	20716422
TOT_040000357	CDS	TOT_040000357	NC_025263.1	776634	776933	R	conserved hypothetical protein	complement(776634..776933)	Theileria orientalis strain Shintoku	20716423
TOT_040000358	CDS	TOT_040000358	NC_025263.1	777322	778428	R	conserved hypothetical protein	complement(777322..778428)	Theileria orientalis strain Shintoku	20716424
TOT_040000359	CDS	TOT_040000359	NC_025263.1	779931	780527	D	sybindin	779931..780527	Theileria orientalis strain Shintoku	20716425
TOT_040000360	CDS	TOT_040000360	NC_025263.1	780735	782221	D	putative methylase family protein; uncharacterized protein	join(780735..780827,780924..781014,781114..781144,781224..781367,781468..781711,781850..781957,782001..782033,782108..782221)	Theileria orientalis strain Shintoku	20716426
TOT_040000361	CDS	TOT_040000361	NC_025263.1	782412	783557	D	Spen paralogue and orthologue C-terminal domain containing protein; uncharacterized protein	join(782412..782687,782772..783020,783079..783179,783320..783390,783502..783557)	Theileria orientalis strain Shintoku	20716427
TOT_040000362	CDS	TOT_040000362	NC_025263.1	783774	785252	R	nuclear RNA binding protein B	complement(join(783774..783848,784027..784143,784449..785002,785120..785252))	Theileria orientalis strain Shintoku	20716428
TOT_040000363	CDS	TOT_040000363	NC_025263.1	786411	788420	D	DEAD-box family RNA-dependent helicase	join(786411..786999,787246..788420)	Theileria orientalis strain Shintoku	20716429
TOT_040000364	CDS	TOT_040000364	NC_025263.1	788703	789914	R	conserved hypothetical protein	complement(788703..789914)	Theileria orientalis strain Shintoku	20716430
TOT_040000365	CDS	TOT_040000365	NC_025263.1	790246	792415	R	cytosol aminopeptidase	complement(join(790246..790377,790408..790564,790701..790761,790796..790919,791095..791295,791338..791655,791688..792012,792132..792415))	Theileria orientalis strain Shintoku	20716431
TOT_040000366	CDS	TOT_040000366	NC_025263.1	792572	793772	R	conserved hypothetical protein	complement(join(792572..792713,792744..792898,792951..793082,793116..793636,793706..793772))	Theileria orientalis strain Shintoku	20716432
TOT_040000367	CDS	TOT_040000367	NC_025263.1	794085	795851	D	HSP20-like chaperone domain containing protein; uncharacterized protein	join(794085..794092,794129..794378,794434..794467,794535..794611,794642..794779,794998..795241,795274..795359,795402..795465,795495..795623,795712..795851)	Theileria orientalis strain Shintoku	20716433
TOT_040000368	CDS	TOT_040000368	NC_025263.1	795990	801703	R	actin-binding FH2 domain containing protein; uncharacterized protein	complement(join(795990..796277,796374..796631,796781..797218,797454..797570,797636..799656,799780..799817,799920..801703))	Theileria orientalis strain Shintoku	20716434
TOT_040000369	CDS	TOT_040000369	NC_025263.1	801955	805195	R	conserved hypothetical protein	complement(join(801955..802115,802147..802273,802304..802390,802421..802478,802510..803164,803255..803692,803725..803897,803985..804259,804291..804506,804536..804606,804636..804690,804721..804758,804790..805195))	Theileria orientalis strain Shintoku	20716435
TOT_040000370	CDS	TOT_040000370	NC_025263.1	805431	807242	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(805431..805531,805568..805680,805712..805881,805911..806092,806126..806180,806321..806376,806411..806494,806648..807242)	Theileria orientalis strain Shintoku	20716436
TOT_040000371	CDS	TOT_040000371	NC_025263.1	807254	808213	R	predicted protein	complement(join(807254..807343,807518..808213))	Theileria orientalis strain Shintoku	20716437
TOT_040000373	CDS	TOT_040000373	NC_025263.1	808419	809306	R	mitochondrial carrier protein	complement(join(808419..808610,808700..808832,808869..809193,809225..809306))	Theileria orientalis strain Shintoku	20716439
TOT_040000372	CDS	TOT_040000372	NC_025263.1	808447	808614	D	mitochondrial carrier protein	808447..808614	Theileria orientalis strain Shintoku	20716438
TOT_040000374	CDS	TOT_040000374	NC_025263.1	809795	811116	D	serine/threonine protein kinase	join(809795..810796,810871..811011,811048..811116)	Theileria orientalis strain Shintoku	20716440
TOT_040000375	CDS	TOT_040000375	NC_025263.1	811496	812280	D	predicted protein	join(811496..811538,811573..811657,811720..811788,811821..812045,812076..812140,812174..812280)	Theileria orientalis strain Shintoku	20716441
TOT_040000376	CDS	TOT_040000376	NC_025263.1	813046	815382	R	LETM1-like domain containing protein; uncharacterized protein	complement(join(813046..813916,814125..814189,814220..814298,814332..814431,814464..815382))	Theileria orientalis strain Shintoku	20716442
TOT_040000377	CDS	TOT_040000377	NC_025263.1	815623	816882	R	cellular retinaldehyde-binding/triple function, C-terminal domain containing protein; uncharacterized protein	complement(join(815623..816148,816278..816882))	Theileria orientalis strain Shintoku	20716443
TOT_040000378	CDS	TOT_040000378	NC_025263.1	817382	817731	D	clone ZZD536 mRNA sequence-like protein	join(817382..817457,817488..817571,817603..817662,817697..817731)	Theileria orientalis strain Shintoku	20716444
TOT_040000379	CDS	TOT_040000379	NC_025263.1	817822	818645	R	prohibitin-like protein	complement(join(817822..818279,818312..818645))	Theileria orientalis strain Shintoku	20716445
TOT_040000380	CDS	TOT_040000380	NC_025263.1	819033	819821	D	Maf1 regulator family protein; uncharacterized protein	join(819033..819142,819181..819297,819330..819462,819540..819821)	Theileria orientalis strain Shintoku	20716446
TOT_040000381	CDS	TOT_040000381	NC_025263.1	819925	823274	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(819925..820120,820152..822265,822306..822370,822402..823116,823149..823274)	Theileria orientalis strain Shintoku	20716447
TOT_040000382	CDS	TOT_040000382	NC_025263.1	823291	824157	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(823291..823358,823525..823654,823686..823824,823864..823949,823990..824157))	Theileria orientalis strain Shintoku	20716448
TOT_040000951	CDS	TOT_040000951	NC_025263.1	824254	825001	R	small GTPase	complement(join(824254..824821,824982..825001))	Theileria orientalis strain Shintoku	20716971
TOT_040000900	CDS	TOT_040000900	NC_025263.1	825290	829669	R	importin-alpha	complement(join(825290..825422,825503..826290,826322..826771,826999..827843,828131..829435,829465..829669))	Theileria orientalis strain Shintoku	20716925
TOT_040000383	CDS	TOT_040000383	NC_025263.1	830463	832307	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(830463..830789,830821..831006,831038..831242,831289..831396,831483..831764,831798..831913,832062..832164,832198..832307)	Theileria orientalis strain Shintoku	20716449
TOT_040000384	CDS	TOT_040000384	NC_025263.1	832366	832740	D	dolichol phosphate mannosyltransferase subunit 3 family protein; uncharacterized protein	join(832366..832479,832511..832618,832648..832740)	Theileria orientalis strain Shintoku	20716450
TOT_040000385	CDS	TOT_040000385	NC_025263.1	832842	834011	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(832842..832943,832955..833763,833828..833890,833921..834011))	Theileria orientalis strain Shintoku	20716451
TOT_040000386	CDS	TOT_040000386	NC_025263.1	834506	835921	D	Surfeit locus 1 family protein; uncharacterized protein	834506..835921	Theileria orientalis strain Shintoku	20716452
TOT_040000387	CDS	TOT_040000387	NC_025263.1	836322	839390	R	RabGAP/TBC domain containing protein; uncharacterized protein	complement(836322..839390)	Theileria orientalis strain Shintoku	20716453
TOT_040000388	CDS	TOT_040000388	NC_025263.1	839631	840872	R	conserved hypothetical protein	complement(join(839631..840274,840333..840554,840692..840872))	Theileria orientalis strain Shintoku	20716454
TOT_040000901	CDS	TOT_040000901	NC_025263.1	841396	841846	R	conserved hypothetical protein	complement(join(841396..841509,841575..841684,841723..841846))	Theileria orientalis strain Shintoku	20716926
TOT_040000389	CDS	TOT_040000389	NC_025263.1	842091	842973	R	tRNA (guanine-N1-)-methyltransferase family protein; uncharacterized protein	complement(join(842091..842237,842271..842348,842382..842462,842497..842562,842602..842744,842796..842973))	Theileria orientalis strain Shintoku	20716455
TOT_040000390	CDS	TOT_040000390	NC_025263.1	844285	846852	D	DNA repair protein (XPGC)/yeast Rad family protein; uncharacterized protein	join(844285..845329,845543..846852)	Theileria orientalis strain Shintoku	20716456
TOT_040000391	CDS	TOT_040000391	NC_025263.1	846945	847301	D	RNA polymerase small subunit	join(846945..847149,847180..847301)	Theileria orientalis strain Shintoku	20716457
TOT_040000392	CDS	TOT_040000392	NC_025263.1	847677	850474	R	galactose oxidase/kelch, beta-propeller domain containing protein; uncharacterized protein	complement(join(847677..847765,847805..848248,848288..848399,848438..848574,848799..848922,848959..849470,849655..850335,850366..850474))	Theileria orientalis strain Shintoku	20716458
TOT_040000393	CDS	TOT_040000393	NC_025263.1	850757	852174	R	conserved hypothetical protein	complement(join(850757..850836,850887..851297,851504..851993,852025..852174))	Theileria orientalis strain Shintoku	20716459
TOT_040000394	CDS	TOT_040000394	NC_025263.1	852993	853904	R	conserved hypothetical protein	complement(852993..853904)	Theileria orientalis strain Shintoku	20716460
TOT_040000395	CDS	TOT_040000395	NC_025263.1	854716	856452	D	mannosyltransferase	join(854716..854863,854922..855033,855070..855339,855374..855455,855486..855637,855668..855785,855897..855992,856031..856243,856357..856452)	Theileria orientalis strain Shintoku	20716461
TOT_040000396	CDS	TOT_040000396	NC_025263.1	856566	859165	R	conserved hypothetical protein	complement(join(856566..856666,856783..857551,857591..859165))	Theileria orientalis strain Shintoku	20716462
TOT_040000397	CDS	TOT_040000397	NC_025263.1	859289	868096	D	HEAT repeat containing protein	join(859289..859309,859592..865423,865619..867424,867435..867531,867616..867797,867860..868096)	Theileria orientalis strain Shintoku	20716463
TOT_040000398	CDS	TOT_040000398	NC_025263.1	868281	869016	R	conserved hypothetical protein	complement(join(868281..868772,868804..868856,868887..869016))	Theileria orientalis strain Shintoku	20716464
TOT_040000399	CDS	TOT_040000399	NC_025263.1	869206	876430	R	zinc finger, N-recognin domain containing protein; uncharacterized protein	complement(join(869206..870044,870118..870125,870164..872356,872444..872830,872981..875015,875046..875221,875254..875425,875455..875503,875533..875601,875635..875719,875749..875998,876028..876099,876130..876222,876265..876430))	Theileria orientalis strain Shintoku	20716465
TOT_040000400	CDS	TOT_040000400	NC_025263.1	877045	880515	D	myosin light chain kinase	join(877045..877264,877296..877493,877525..877833,877865..880515)	Theileria orientalis strain Shintoku	20716466
TOT_040000952	CDS	TOT_040000952	NC_025263.1	880775	882192	D	conserved hypothetical protein	join(880775..880983,881015..881273,881306..881497,881529..881619,881744..882192)	Theileria orientalis strain Shintoku	20716972
TOT_040000402	CDS	TOT_040000402	NC_025263.1	882194	883711	R	zinc finger, RING-type domain containing protein; uncharacterized protein	complement(join(882194..882308,882344..882416,882454..882629,882669..883054,883085..883156,883189..883257,883290..883372,883403..883544,883575..883649,883682..883711))	Theileria orientalis strain Shintoku	20716467
TOT_040000403	CDS	TOT_040000403	NC_025263.1	884046	884895	D	translation elongation factor EF-1 subunit alpha	join(884046..884262,884293..884419,884449..884572,884608..884895)	Theileria orientalis strain Shintoku	20716468
TOT_040000953	CDS	TOT_040000953	NC_025263.1	885612	885869	D	elongation factor subunit	885612..885869	Theileria orientalis strain Shintoku	20716973
TOT_040000405	CDS	TOT_040000405	NC_025263.1	886039	886504	R	ribosomal protein L37, mitochondrial family protein; uncharacterized protein	complement(join(886039..886173,886208..886504))	Theileria orientalis strain Shintoku	20716469
TOT_040000406	CDS	TOT_040000406	NC_025263.1	886512	888799	R	RAP domain containing protein; uncharacterized protein	complement(join(886512..886635,886668..886776,886811..886915,886959..887195,887227..887320,887353..887451,887492..887549,887583..887730,887772..887875,887907..888000,888031..888100,888139..888175,888209..888366,888403..888631,888666..888799))	Theileria orientalis strain Shintoku	20716470
TOT_040000407	CDS	TOT_040000407	NC_025263.1	888936	892339	R	DNA replication protein	complement(join(888936..889231,889320..889833,889948..890438,890470..890604,890637..890728,890833..890991,891023..891104,891187..891315,891352..892339))	Theileria orientalis strain Shintoku	20716471
TOT_040000408	CDS	TOT_040000408	NC_025263.1	892575	894490	R	conserved hypothetical protein	complement(join(892575..894266,894377..894490))	Theileria orientalis strain Shintoku	20716472
TOT_040000409	CDS	TOT_040000409	NC_025263.1	894733	900147	R	silencing mediator for retinoid and thyroid hormone receptor	complement(894733..900147)	Theileria orientalis strain Shintoku	20716473
TOT_040000410	CDS	TOT_040000410	NC_025263.1	900500	903318	R	protein kinase, core domain containing protein; uncharacterized protein	complement(join(900500..900628,900659..900735,900765..901011,901053..901531,901569..901783,901823..902057,902091..902220,902251..902330,902361..902448,902481..903112,903156..903318))	Theileria orientalis strain Shintoku	20716474
TOT_040000411	CDS	TOT_040000411	NC_025263.1	903878	904300	D	conserved hypothetical protein	join(903878..903883,903915..904177,904207..904300)	Theileria orientalis strain Shintoku	20716475
TOT_040000412	CDS	TOT_040000412	NC_025263.1	904519	906401	D	bifunctional dihydrofolate reductase/thymidilate synthase	join(904519..904793,904825..904919,904951..905331,905363..905456,905488..905633,905719..905785,905819..905913,905974..906134,906177..906401)	Theileria orientalis strain Shintoku	20716476
TOT_040000413	CDS	TOT_040000413	NC_025263.1	906489	907220	D	conserved hypothetical protein	906489..907220	Theileria orientalis strain Shintoku	20716477
TOT_040000414	CDS	TOT_040000414	NC_025263.1	907389	910268	D	conserved hypothetical protein	join(907389..907463,907496..907601,907634..907745,907777..907961,907991..908181,908212..908415,908459..908553,908697..908949,909028..909145,909168..909271,909353..909529,909684..910107,910138..910268)	Theileria orientalis strain Shintoku	20716478
TOT_040000415	CDS	TOT_040000415	NC_025263.1	910340	910761	D	conserved hypothetical protein	join(910340..910438,910475..910526,910562..910761)	Theileria orientalis strain Shintoku	20716479
TOT_040000416	CDS	TOT_040000416	NC_025263.1	910989	914351	R	DNA helicase	complement(join(910989..911269,911651..913898,914085..914351))	Theileria orientalis strain Shintoku	20716480
TOT_040000417	CDS	TOT_040000417	NC_025263.1	914822	918143	R	chromosome maintenance protein	complement(join(914822..917350,917370..918143))	Theileria orientalis strain Shintoku	20716481
TOT_040000418	CDS	TOT_040000418	NC_025263.1	918380	919851	R	conserved hypothetical protein	complement(join(918380..918595,918627..918760,918791..918927,918960..919095,919125..919422,919455..919742,919783..919851))	Theileria orientalis strain Shintoku	20716482
TOT_040000419	CDS	TOT_040000419	NC_025263.1	920144	921537	D	conserved hypothetical protein	join(920144..920195,920327..920386,920419..920537,920567..920666,920698..920805,920837..920900,920936..921170,921274..921537)	Theileria orientalis strain Shintoku	20716483
TOT_040000420	CDS	TOT_040000420	NC_025263.1	921855	923782	R	Kri1 family protein; uncharacterized protein	complement(join(921855..922746,922850..922912,922944..923072,923175..923301,923335..923428,923461..923645,923683..923782))	Theileria orientalis strain Shintoku	20716484
TOT_040000954	CDS	TOT_040000954	NC_025263.1	924160	926034	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	join(924160..924660,924693..924890,924925..925207,925251..925403,925439..925724,925760..925899,925937..926034)	Theileria orientalis strain Shintoku	20716974
TOT_040000955	CDS	TOT_040000955	NC_025263.1	926206	928965	D	metallopeptidase	join(926206..926547,926581..926681,926715..926871,927064..928096,928221..928258,928403..928528,928720..928965)	Theileria orientalis strain Shintoku	20716975
TOT_040000423	CDS	TOT_040000423	NC_025263.1	929284	929922	R	60S ribosomal protein L6	complement(929284..929922)	Theileria orientalis strain Shintoku	20716485
TOT_040000424	CDS	TOT_040000424	NC_025263.1	930769	931925	D	elongation factor 1-gamma	join(930769..930771,930801..931925)	Theileria orientalis strain Shintoku	20716486
TOT_040000425	CDS	TOT_040000425	NC_025263.1	932034	932998	R	SJCHGC00877 protein; uncharacterized protein	complement(join(932034..932179,932214..932300,932352..932433,932465..932578,932609..932683,932715..932783,932822..932998))	Theileria orientalis strain Shintoku	20716487
TOT_040000426	CDS	TOT_040000426	NC_025263.1	933270	935224	R	conserved hypothetical protein	complement(join(933270..933544,933584..933721,933769..933773,933909..933940,933973..934062,934096..934156,934188..934269,934345..934402,934433..934606,934636..934712,934744..934961,935007..935224))	Theileria orientalis strain Shintoku	20716488
TOT_040000427	CDS	TOT_040000427	NC_025263.1	935400	936625	R	conserved hypothetical protein	complement(join(935400..935724,935755..935904,935937..936541,936578..936625))	Theileria orientalis strain Shintoku	20716489
TOT_040000428	CDS	TOT_040000428	NC_025263.1	936858	937496	R	arenavirus nucleocapsid protein family protein; uncharacterized protein	complement(join(936858..936937,936977..937088,937128..937192,937226..937496))	Theileria orientalis strain Shintoku	20716490
TOT_040000429	CDS	TOT_040000429	NC_025263.1	938127	941762	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(938127..938199,938250..938445,938481..938543,938576..938657,938689..939007,939082..939150,939180..939241,939277..939777,939989..940297,940534..940695,940728..941762)	Theileria orientalis strain Shintoku	20716491
TOT_040000430	CDS	TOT_040000430	NC_025263.1	941764	941925	R	hypothetical protein	complement(941764..941925)	Theileria orientalis strain Shintoku	20716492
TOT_040000431	CDS	TOT_040000431	NC_025263.1	941973	942647	D	hypothetical protein	join(941973..942004,942095..942176,942207..942419,942543..942647)	Theileria orientalis strain Shintoku	20716493
TOT_040000432	CDS	TOT_040000432	NC_025263.1	943213	945330	D	conserved hypothetical protein	943213..945330	Theileria orientalis strain Shintoku	20716494
TOT_040000433	CDS	TOT_040000433	NC_025263.1	945522	948942	D	Armadillo-like helical domain containing protein; uncharacterized protein	join(945522..947109,947224..948439,948670..948896,948923..948942)	Theileria orientalis strain Shintoku	20716495
TOT_040000434	CDS	TOT_040000434	NC_025263.1	949124	951086	R	conserved hypothetical protein	complement(join(949124..950491,950658..951086))	Theileria orientalis strain Shintoku	20716496
TOT_040000435	CDS	TOT_040000435	NC_025263.1	951580	951960	D	ribosomal protein S6 family protein; uncharacterized protein	join(951580..951731,951765..951960)	Theileria orientalis strain Shintoku	20716497
TOT_040000436	CDS	TOT_040000436	NC_025263.1	952032	952374	R	PV1H14140_P-like; putative 60S Ribosomal protein L44	complement(join(952032..952130,952162..952374))	Theileria orientalis strain Shintoku	20716498
TOT_040000437	CDS	TOT_040000437	NC_025263.1	953518	957339	D	peptidase C14, caspase catalytic domain containing protein; uncharacterized protein	join(953518..956163,956221..956751,956842..957339)	Theileria orientalis strain Shintoku	20716499
TOT_040000438	CDS	TOT_040000438	NC_025263.1	957585	960609	D	root hair defective 3 GTP-binding family protein; uncharacterized protein	join(957585..957673,957748..957845,957911..958253,958331..958392,958460..958521,958553..958998,959196..960362,960495..960609)	Theileria orientalis strain Shintoku	20716500
TOT_040000439	CDS	TOT_040000439	NC_025263.1	960917	961381	D	zinc finger, HIT-type domain containing protein; uncharacterized protein	join(960917..961062,961135..961381)	Theileria orientalis strain Shintoku	20716501
TOT_040000440	CDS	TOT_040000440	NC_025263.1	961382	962974	R	dimethyladenosine transferase	complement(join(961382..961431,961555..961699,961730..961894,962052..962122,962151..962534,962628..962831,962863..962974))	Theileria orientalis strain Shintoku	20716502
TOT_040000441	CDS	TOT_040000441	NC_025263.1	963071	965562	R	phosphorylase phosphatase	complement(join(963071..963176,963258..963358,963403..963474,963594..963999,964030..964355,964387..964690,964720..964810,964914..965034,965064..965218,965295..965562))	Theileria orientalis strain Shintoku	20716503
TOT_040000442	CDS	TOT_040000442	NC_025263.1	966212	971097	D	peptidase M16, C-terminal domain containing protein; uncharacterized protein	join(966212..966400,966484..966522,966554..966753,966798..966954,966990..967120,967158..967276,967327..967441,967477..967520,967559..968185,968285..968364,968540..969544,969681..970159,970313..970341,970383..970459,970669..971097)	Theileria orientalis strain Shintoku	20716504
TOT_040000443	CDS	TOT_040000443	NC_025263.1	971325	975168	R	RNA polymerases I and III subunit	complement(join(971325..972236,972281..972967,973102..973455,973474..973645,973678..973903,973936..974224,974363..974493,974994..975168))	Theileria orientalis strain Shintoku	20716505
TOT_040000444	CDS	TOT_040000444	NC_025263.1	975362	977822	D	lysyl-tRNA synthetase	join(975362..976630,976743..976896,977014..977822)	Theileria orientalis strain Shintoku	20716506
TOT_040000956	CDS	TOT_040000956	NC_025263.1	978109	978528	R	prefoldin beta-like domain containing protein; uncharacterized protein	complement(join(978109..978280,978422..978528))	Theileria orientalis strain Shintoku	20716976
TOT_040000446	CDS	TOT_040000446	NC_025263.1	978591	982614	R	conserved hypothetical protein	complement(join(978591..978628,978709..978871,978997..979093,979137..979279,979330..980033,980268..981128,981270..981429,981460..981600,981633..981790,981831..981918,981950..981983,982013..982251,982369..982614))	Theileria orientalis strain Shintoku	20716507
TOT_040000447	CDS	TOT_040000447	NC_025263.1	982849	983326	D	conserved hypothetical protein	join(982849..983063,983155..983326)	Theileria orientalis strain Shintoku	20716508
TOT_040000448	CDS	TOT_040000448	NC_025263.1	983513	984903	R	pre-mRNA splicing complex subunit	complement(join(983513..984702,984852..984903))	Theileria orientalis strain Shintoku	20716509
TOT_040000449	CDS	TOT_040000449	NC_025263.1	985282	986119	R	triosephosphate isomerase	complement(join(985282..985359,985400..985453,985486..985934,986008..986119))	Theileria orientalis strain Shintoku	20716510
TOT_040000450	CDS	TOT_040000450	NC_025263.1	986336	989303	D	conserved hypothetical protein	join(986336..986437,986540..986640,986683..986937,986969..987059,987101..987210,987231..987384,987438..987506,987635..987710,987757..987885,987980..988062,988228..988496,988589..988841,988874..989011,989043..989110,989177..989303)	Theileria orientalis strain Shintoku	20716511
TOT_040000451	CDS	TOT_040000451	NC_025263.1	989705	991788	D	conserved hypothetical protein	join(989705..989967,990106..990727,990856..991324,991400..991438,991535..991788)	Theileria orientalis strain Shintoku	20716512
TOT_040000452	CDS	TOT_040000452	NC_025263.1	991940	992479	R	hypothetical protein	complement(join(991940..991979,991984..992090,992312..992479))	Theileria orientalis strain Shintoku	20716513
TOT_040000453	CDS	TOT_040000453	NC_025263.1	992584	993486	D	vesicle-associated membrane protein	join(992584..993046,993275..993486)	Theileria orientalis strain Shintoku	20716514
TOT_040000454	CDS	TOT_040000454	NC_025263.1	993682	994229	D	RNA polymerase common subunit	join(993682..993834,993921..994229)	Theileria orientalis strain Shintoku	20716515
TOT_040000455	CDS	TOT_040000455	NC_025263.1	994426	997130	R	PV1H14080_P-like; uncharacterized protein	complement(join(994426..994665,994722..995266,995941..996297,996353..996643,996711..996932,996998..997130))	Theileria orientalis strain Shintoku	20716516
TOT_040000456	CDS	TOT_040000456	NC_025263.1	997918	1000366	D	zinc finger, DHHC-type domain containing protein; uncharacterized protein	join(997918..998070,998125..998571,998604..999102,999188..999254,999385..999816,999934..1000366)	Theileria orientalis strain Shintoku	20716517
TOT_040000457	CDS	TOT_040000457	NC_025263.1	1000583	1003045	D	Spc97/Spc98 family protein; uncharacterized protein	join(1000583..1000820,1000854..1003045)	Theileria orientalis strain Shintoku	20716518
TOT_040000458	CDS	TOT_040000458	NC_025263.1	1003430	1004919	R	branched-chain alpha-keto acid dihydrolipoyl acyltransferase precursor	complement(join(1003430..1003576,1003607..1004167,1004222..1004302,1004433..1004722,1004793..1004919))	Theileria orientalis strain Shintoku	20716519
TOT_040000459	CDS	TOT_040000459	NC_025263.1	1005682	1006792	D	membrane skeletal protein IMC1	join(1005682..1006119,1006273..1006574,1006651..1006792)	Theileria orientalis strain Shintoku	20716520
TOT_040000460	CDS	TOT_040000460	NC_025263.1	1006897	1008895	D	conserved hypothetical protein	join(1006897..1007736,1007793..1008794,1008803..1008895)	Theileria orientalis strain Shintoku	20716521
TOT_040000461	CDS	TOT_040000461	NC_025263.1	1009364	1013408	R	TLDc domain containing protein; uncharacterized protein	complement(join(1009364..1009617,1009670..1009862,1010115..1010777,1011074..1012176,1012302..1012742,1012866..1012911,1012942..1013053,1013127..1013221,1013283..1013408))	Theileria orientalis strain Shintoku	20716522
TOT_040000462	CDS	TOT_040000462	NC_025263.1	1013816	1015091	R	RecA bacterial DNA recombination family protein; uncharacterized protein	complement(join(1013816..1013943,1013974..1014040,1014074..1014127,1014159..1014255,1014287..1014345,1014378..1014428,1014465..1014568,1014604..1014700,1014891..1015091))	Theileria orientalis strain Shintoku	20716523
TOT_040000463	CDS	TOT_040000463	NC_025263.1	1015338	1016422	R	conserved hypothetical protein	complement(join(1015338..1015724,1015755..1015842,1015939..1016072,1016102..1016243,1016298..1016422))	Theileria orientalis strain Shintoku	20716524
TOT_040000464	CDS	TOT_040000464	NC_025263.1	1016474	1016897	R	conserved hypothetical protein	complement(join(1016474..1016575,1016624..1016702,1016734..1016897))	Theileria orientalis strain Shintoku	20716525
TOT_040000465	CDS	TOT_040000465	NC_025263.1	1017088	1018829	R	fumble domain containing protein; uncharacterized protein	complement(join(1017088..1017343,1017376..1017435,1017465..1017552,1017585..1017659,1017692..1017743,1017776..1017832,1017866..1018074,1018106..1018829))	Theileria orientalis strain Shintoku	20716526
TOT_040000466	CDS	TOT_040000466	NC_025263.1	1019026	1020402	R	conserved hypothetical protein	complement(join(1019026..1019432,1019619..1020402))	Theileria orientalis strain Shintoku	20716527
TOT_040000467	CDS	TOT_040000467	NC_025263.1	1020689	1023271	R	conserved hypothetical protein	complement(join(1020689..1020850,1020908..1020991,1021031..1021150,1021223..1021828,1021858..1021995,1022050..1022143,1022176..1022618,1022741..1023271))	Theileria orientalis strain Shintoku	20716528
TOT_040000468	CDS	TOT_040000468	NC_025263.1	1024356	1025114	D	zinc finger, CCCH-type domain containing protein; uncharacterized protein	1024356..1025114	Theileria orientalis strain Shintoku	20716529
TOT_040000469	CDS	TOT_040000469	NC_025263.1	1025155	1025592	R	zinc finger, U1-type domain containing protein; uncharacterized protein	complement(join(1025155..1025285,1025340..1025414,1025490..1025592))	Theileria orientalis strain Shintoku	20716530
TOT_040000470	CDS	TOT_040000470	NC_025263.1	1026831	1028134	D	Mov34/MPN/PAD-1 family protein; uncharacterized protein	join(1026831..1027088,1027109..1027426,1027468..1027567,1027600..1027656,1027695..1027783,1027904..1028035,1028066..1028134)	Theileria orientalis strain Shintoku	20716531
TOT_040000471	CDS	TOT_040000471	NC_025263.1	1028360	1029964	R	conserved hypothetical protein	complement(join(1028360..1028530,1028560..1028946,1029050..1029069,1029101..1029149,1029191..1029324,1029391..1029964))	Theileria orientalis strain Shintoku	20716532
TOT_040000472	CDS	TOT_040000472	NC_025263.1	1030428	1031849	D	conserved hypothetical protein	join(1030428..1031395,1031495..1031577,1031734..1031849)	Theileria orientalis strain Shintoku	20716533
TOT_040000473	CDS	TOT_040000473	NC_025263.1	1032216	1033691	R	vacuolar ATP synthase subunit beta	complement(1032216..1033691)	Theileria orientalis strain Shintoku	20716534
TOT_040000474	CDS	TOT_040000474	NC_025263.1	1034012	1034959	D	conserved hypothetical protein	1034012..1034959	Theileria orientalis strain Shintoku	20716535
TOT_040000475	CDS	TOT_040000475	NC_025263.1	1035200	1037893	R	protein of unknown function GLTT domain containing protein; uncharacterized protein	complement(1035200..1037893)	Theileria orientalis strain Shintoku	20716536
TOT_040000476	CDS	TOT_040000476	NC_025263.1	1038075	1040260	R	proteasome component region PCI domain containing protein; uncharacterized protein	complement(join(1038075..1038116,1038147..1038227,1038304..1038396,1038448..1038573,1038606..1038767,1038895..1039008,1039043..1039152,1039186..1039255,1039357..1039459,1039513..1039571,1039604..1039681,1039766..1040260))	Theileria orientalis strain Shintoku	20716537
TOT_040000477	CDS	TOT_040000477	NC_025263.1	1040309	1042229	D	conserved hypothetical protein	join(1040309..1040663,1040697..1041294,1041326..1041386,1041420..1041500,1041530..1041591,1041681..1041834,1041870..1042229)	Theileria orientalis strain Shintoku	20716538
TOT_040000478	CDS	TOT_040000478	NC_025263.1	1042769	1045216	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1042769..1045216)	Theileria orientalis strain Shintoku	20716539
TOT_040000479	CDS	TOT_040000479	NC_025263.1	1045394	1045498	R	hypothetical protein	complement(1045394..1045498)	Theileria orientalis strain Shintoku	20716540
TOT_040000480	CDS	TOT_040000480	NC_025263.1	1045643	1047049	R	vacuolar ATP synthase	complement(join(1045643..1045885,1046036..1046495,1046528..1046683,1046723..1046776,1046811..1047049))	Theileria orientalis strain Shintoku	20716541
TOT_040000481	CDS	TOT_040000481	NC_025263.1	1047098	1052755	R	conserved hypothetical protein	complement(join(1047098..1048449,1048630..1052209,1052240..1052755))	Theileria orientalis strain Shintoku	20716542
TOT_040000482	CDS	TOT_040000482	NC_025263.1	1052915	1054312	R	YL1 nuclear family protein; uncharacterized protein	complement(join(1052915..1053358,1053397..1053525,1053605..1053687,1053721..1053787,1053818..1053940,1053976..1054135,1054170..1054312))	Theileria orientalis strain Shintoku	20716543
TOT_040000483	CDS	TOT_040000483	NC_025263.1	1054652	1056100	D	conserved hypothetical protein	1054652..1056100	Theileria orientalis strain Shintoku	20716544
TOT_040000957	CDS	TOT_040000957	NC_025263.1	1056137	1058356	R	prefoldin domain containing protein; uncharacterized protein	complement(join(1056137..1056217,1056260..1056444,1056490..1056821,1056921..1057288,1057376..1057406,1057493..1057587,1057617..1057801,1057831..1058356))	Theileria orientalis strain Shintoku	20716977
TOT_040000958	CDS	TOT_040000958	NC_025263.1	1058461	1060657	R	conserved hypothetical protein	complement(join(1058461..1058568,1058643..1058852,1058933..1059470,1059658..1059711,1059748..1059812,1059845..1060657))	Theileria orientalis strain Shintoku	20716978
TOT_040000959	CDS	TOT_040000959	NC_025263.1	1060742	1061063	R	60S ribosomal subunit biogenesis protein	complement(join(1060742..1060786,1060821..1060970,1061025..1061063))	Theileria orientalis strain Shintoku	20716979
TOT_040000904	CDS	TOT_040000904	NC_025263.1	1061913	1062577	R	conserved hypothetical protein	complement(join(1061913..1061975,1062049..1062128,1062224..1062288,1062423..1062577))	Theileria orientalis strain Shintoku	20716927
TOT_040000485	CDS	TOT_040000485	NC_025263.1	1063249	1064623	D	conserved hypothetical protein	join(1063249..1063563,1063805..1064623)	Theileria orientalis strain Shintoku	20716545
TOT_040000486	CDS	TOT_040000486	NC_025263.1	1065065	1067521	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1065065..1065864,1065946..1067521)	Theileria orientalis strain Shintoku	20716546
TOT_040000487	CDS	TOT_040000487	NC_025263.1	1068015	1070150	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1068015..1070150	Theileria orientalis strain Shintoku	20716547
TOT_040000488	CDS	TOT_040000488	NC_025263.1	1070700	1071962	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1070700..1071962	Theileria orientalis strain Shintoku	20716548
TOT_040000489	CDS	TOT_040000489	NC_025263.1	1072180	1076461	R	26S proteasome regulatory subunit	complement(join(1072180..1072576,1072805..1073211,1073344..1073507,1073570..1073840,1074105..1074203,1074344..1074465,1074508..1074597,1074668..1074808,1074934..1075030,1075069..1075242,1075289..1075339,1075371..1075930,1075961..1076220,1076277..1076461))	Theileria orientalis strain Shintoku	20716549
TOT_040000490	CDS	TOT_040000490	NC_025263.1	1076951	1080323	R	serine/threonine protein phosphatase	complement(join(1076951..1077047,1077233..1077402,1077537..1078036,1078060..1078117,1078289..1078489,1078573..1078790,1078825..1078933,1078997..1079063,1079142..1079205,1079235..1079406,1079547..1079664,1079707..1079846,1079877..1080061,1080209..1080323))	Theileria orientalis strain Shintoku	20716550
TOT_040000491	CDS	TOT_040000491	NC_025263.1	1080707	1082015	D	conserved hypothetical protein	join(1080707..1080819,1080864..1080915,1080947..1081099,1081130..1081218,1081346..1081476,1081704..1081776,1081958..1082015)	Theileria orientalis strain Shintoku	20716551
TOT_040000492	CDS	TOT_040000492	NC_025263.1	1082132	1082813	R	40S ribosomal protein S3	complement(join(1082132..1082764,1082796..1082813))	Theileria orientalis strain Shintoku	20716552
TOT_040000493	CDS	TOT_040000493	NC_025263.1	1083857	1085787	D	conserved hypothetical protein	join(1083857..1084331,1084388..1084442,1084485..1084593,1084626..1084698,1084732..1085031,1085067..1085383,1085424..1085555,1085587..1085787)	Theileria orientalis strain Shintoku	20716553
TOT_040000960	CDS	TOT_040000960	NC_025263.1	1085977	1088329	R	conserved hypothetical protein	complement(join(1085977..1086117,1086149..1086347,1086389..1086489,1086520..1086637,1086704..1086798,1086846..1087261,1087315..1087465,1087502..1087785,1087816..1088144,1088193..1088329))	Theileria orientalis strain Shintoku	20716980
TOT_040000961	CDS	TOT_040000961	NC_025263.1	1089045	1089888	R	conserved hypothetical protein	complement(join(1089045..1089283,1089391..1089491,1089609..1089735,1089768..1089888))	Theileria orientalis strain Shintoku	20716981
TOT_040000496	CDS	TOT_040000496	NC_025263.1	1090529	1090832	D	conserved hypothetical protein	join(1090529..1090584,1090619..1090832)	Theileria orientalis strain Shintoku	20716554
TOT_040000497	CDS	TOT_040000497	NC_025263.1	1090986	1093459	R	tRNA 3' processing endoribonuclease	complement(join(1090986..1091155,1091186..1091321,1091433..1091555,1091646..1091772,1091806..1091899,1091972..1092113,1092157..1092201,1092692..1092844,1092880..1093090,1093122..1093459))	Theileria orientalis strain Shintoku	20716555
TOT_040000498	CDS	TOT_040000498	NC_025263.1	1093636	1094572	D	conserved hypothetical protein	join(1093636..1093812,1093845..1094020,1094065..1094572)	Theileria orientalis strain Shintoku	20716556
TOT_040000905	CDS	TOT_040000905	NC_025263.1	1095051	1097450	R	conserved hypothetical protein	complement(join(1095051..1096417,1096580..1097450))	Theileria orientalis strain Shintoku	20716928
TOT_040000906	CDS	TOT_040000906	NC_025263.1	1097850	1098704	R	conserved hypothetical protein	complement(1097850..1098704)	Theileria orientalis strain Shintoku	20716929
TOT_040000907	CDS	TOT_040000907	NC_025263.1	1098910	1099972	R	conserved hypothetical protein	complement(join(1098910..1099126,1099226..1099395,1099426..1099655,1099694..1099734,1099767..1099860,1099897..1099972))	Theileria orientalis strain Shintoku	20716930
TOT_040000499	CDS	TOT_040000499	NC_025263.1	1102011	1102525	R	serine/threonine protein phosphatase 2C	complement(join(1102011..1102369,1102399..1102525))	Theileria orientalis strain Shintoku	20716557
TOT_040000500	CDS	TOT_040000500	NC_025263.1	1103270	1107214	D	chromosome segregation protein	join(1103270..1105690,1105703..1107214)	Theileria orientalis strain Shintoku	20716558
TOT_040000501	CDS	TOT_040000501	NC_025263.1	1108042	1110305	R	conserved hypothetical protein	complement(join(1108042..1110088,1110271..1110305))	Theileria orientalis strain Shintoku	20716559
TOT_040000502	CDS	TOT_040000502	NC_025263.1	1111169	1111492	D	histone H2B	1111169..1111492	Theileria orientalis strain Shintoku	20716560
TOT_040000503	CDS	TOT_040000503	NC_025263.1	1112150	1112851	D	conserved hypothetical protein	1112150..1112851	Theileria orientalis strain Shintoku	20716561
TOT_040000504	CDS	TOT_040000504	NC_025263.1	1114183	1116939	D	DNA-binding chaperone	join(1114183..1114318,1114387..1114887,1114922..1115045,1115215..1115469,1115641..1115730,1115765..1115857,1116064..1116691,1116796..1116939)	Theileria orientalis strain Shintoku	20716562
TOT_040000505	CDS	TOT_040000505	NC_025263.1	1117182	1117901	R	hypothetical protein	complement(join(1117182..1117644,1117828..1117901))	Theileria orientalis strain Shintoku	20716563
TOT_040000506	CDS	TOT_040000506	NC_025263.1	1118116	1120398	D	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	1118116..1120398	Theileria orientalis strain Shintoku	20716564
TOT_040000507	CDS	TOT_040000507	NC_025263.1	1121017	1122360	D	conserved hypothetical protein	join(1121017..1121726,1121777..1122193,1122291..1122360)	Theileria orientalis strain Shintoku	20716565
TOT_040000508	CDS	TOT_040000508	NC_025263.1	1122616	1127613	D	conserved hypothetical protein	join(1122616..1122669,1122778..1122858,1122957..1123029,1123069..1125864,1125949..1126100,1126203..1126471,1126791..1127613)	Theileria orientalis strain Shintoku	20716566
TOT_040000509	CDS	TOT_040000509	NC_025263.1	1127701	1127835	R	hypothetical protein	complement(1127701..1127835)	Theileria orientalis strain Shintoku	20716567
TOT_040000962	CDS	TOT_040000962	NC_025263.1	1128452	1129459	D	NOT2/NOT3/NOT5 domain containing protein; uncharacterized protein	join(1128452..1128891,1129048..1129301,1129338..1129459)	Theileria orientalis strain Shintoku	20716982
TOT_040000511	CDS	TOT_040000511	NC_025263.1	1129941	1131684	D	proteasome component region PCI domain containing protein; uncharacterized protein	join(1129941..1130240,1130344..1130637,1130718..1130881,1131141..1131684)	Theileria orientalis strain Shintoku	20716568
TOT_040000512	CDS	TOT_040000512	NC_025263.1	1131823	1133938	R	26S proteasome regulatory subunit	complement(join(1131823..1131876,1132238..1132358,1132398..1132566,1132726..1132867,1132904..1132998,1133033..1133124,1133163..1133308,1133344..1133549,1133671..1133753,1133834..1133905,1133928..1133938))	Theileria orientalis strain Shintoku	20716569
TOT_040000513	CDS	TOT_040000513	NC_025263.1	1134540	1135112	D	60S ribosomal protein L22	join(1134540..1134656,1134824..1134955,1134996..1135112)	Theileria orientalis strain Shintoku	20716570
TOT_040000514	CDS	TOT_040000514	NC_025263.1	1135512	1136475	D	Ser/Arg-rich splicing factor	join(1135512..1135819,1135980..1136475)	Theileria orientalis strain Shintoku	20716571
TOT_040000515	CDS	TOT_040000515	NC_025263.1	1136912	1139634	R	RNA recognition motif, RNP-1 domain containing protein; uncharacterized protein	complement(join(1136912..1137272,1137441..1138378,1138541..1138935,1138994..1139140,1139280..1139342,1139422..1139512,1139599..1139634))	Theileria orientalis strain Shintoku	20716572
TOT_040000516	CDS	TOT_040000516	NC_025263.1	1139857	1140603	D	protein-tyrosine phosphatase, low molecular weight family protein; uncharacterized protein	join(1139857..1139969,1140034..1140259,1140553..1140603)	Theileria orientalis strain Shintoku	20716573
TOT_040000517	CDS	TOT_040000517	NC_025263.1	1140636	1141046	R	histone H3	complement(1140636..1141046)	Theileria orientalis strain Shintoku	20716574
TOT_040000518	CDS	TOT_040000518	NC_025263.1	1142292	1142675	D	late histone H2A.2.2	1142292..1142675	Theileria orientalis strain Shintoku	20716575
TOT_040000519	CDS	TOT_040000519	NC_025263.1	1143001	1146729	D	transcription factor	join(1143001..1143065,1143303..1143455,1143524..1143962,1144161..1144864,1145036..1145439,1145483..1145662,1145774..1145957,1145989..1146193,1146292..1146431,1146462..1146729)	Theileria orientalis strain Shintoku	20716576
TOT_040000520	CDS	TOT_040000520	NC_025263.1	1147117	1148196	D	ribosomal protein L19	join(1147117..1147524,1147558..1147639,1147696..1147817,1147847..1147970,1148027..1148196)	Theileria orientalis strain Shintoku	20716577
TOT_040000521	CDS	TOT_040000521	NC_025263.1	1148647	1150254	R	splicing factor	complement(join(1148647..1148785,1148922..1149145,1149218..1149452,1149546..1149933,1150080..1150254))	Theileria orientalis strain Shintoku	20716578
TOT_040000522	CDS	TOT_040000522	NC_025263.1	1151010	1152050	D	zinc finger, DHHC-type domain containing protein; uncharacterized protein	join(1151010..1151106,1151138..1151265,1151323..1151585,1151642..1151797,1151834..1152050)	Theileria orientalis strain Shintoku	20716579
TOT_040000523	CDS	TOT_040000523	NC_025263.1	1152375	1156762	R	conserved hypothetical protein	complement(join(1152375..1152517,1152557..1152839,1152900..1153268,1153363..1153441,1153675..1153980,1154098..1156448,1156700..1156762))	Theileria orientalis strain Shintoku	20716580
TOT_040000524	CDS	TOT_040000524	NC_025263.1	1156941	1158807	D	cardiolipin synthetase	join(1156941..1157054,1157085..1157172,1157252..1157415,1157448..1157885,1157980..1158177,1158253..1158380,1158462..1158649,1158680..1158807)	Theileria orientalis strain Shintoku	20716581
TOT_040000525	CDS	TOT_040000525	NC_025263.1	1158957	1160821	R	hypothetical protein	complement(join(1158957..1160406,1160438..1160496,1160528..1160821))	Theileria orientalis strain Shintoku	20716582
TOT_040000963	CDS	TOT_040000963	NC_025263.1	1160821	1162811	R	Longin-like domain containing protein; uncharacterized protein	complement(join(1160821..1160910,1161122..1161442,1161502..1161645,1161809..1161885,1161918..1162068,1162113..1162448,1162509..1162811))	Theileria orientalis strain Shintoku	20716983
TOT_040000527	CDS	TOT_040000527	NC_025263.1	1163368	1167561	D	DNA-directed RNA polymerase	join(1163368..1163452,1163488..1163727,1163771..1163969,1164002..1164275,1164306..1164500,1164624..1164774,1164813..1165713,1165813..1166753,1166827..1166875,1166918..1167113,1167145..1167446,1167480..1167561)	Theileria orientalis strain Shintoku	20716583
TOT_040000528	CDS	TOT_040000528	NC_025263.1	1167628	1169956	D	MAC/perforin	join(1167628..1167850,1167892..1168091,1168146..1168354,1168480..1168655,1168687..1169117,1169149..1169439,1169494..1169655,1169725..1169797,1169829..1169956)	Theileria orientalis strain Shintoku	20716584
TOT_040000529	CDS	TOT_040000529	NC_025263.1	1170019	1172380	R	MAC/perforin	complement(join(1170019..1170149,1170173..1170257,1170289..1170377,1170413..1170515,1170547..1170691,1170717..1170856,1170887..1171305,1171361..1171542,1171573..1171650,1171681..1171808,1171916..1172088,1172120..1172200,1172233..1172380))	Theileria orientalis strain Shintoku	20716585
TOT_040000530	CDS	TOT_040000530	NC_025263.1	1172715	1173637	D	ribosomal protein L47, mitochondrial family protein; uncharacterized protein	join(1172715..1172793,1172833..1173047,1173077..1173169,1173200..1173276,1173367..1173473,1173504..1173637)	Theileria orientalis strain Shintoku	20716586
TOT_040000531	CDS	TOT_040000531	NC_025263.1	1173673	1175878	R	conserved hypothetical protein	complement(join(1173673..1175489,1175521..1175878))	Theileria orientalis strain Shintoku	20716587
TOT_040000532	CDS	TOT_040000532	NC_025263.1	1176470	1181145	R	DNA-directed RNA polymerase	complement(join(1176470..1177375,1177421..1177494,1177563..1177709,1177977..1178468,1178706..1179089,1179121..1179237,1179365..1179586,1179626..1179793,1179856..1180059,1180127..1180674,1180707..1180818,1180915..1181049,1181085..1181145))	Theileria orientalis strain Shintoku	20716588
TOT_040000533	CDS	TOT_040000533	NC_025263.1	1181405	1182118	D	conserved hypothetical protein	1181405..1182118	Theileria orientalis strain Shintoku	20716589
TOT_040000534	CDS	TOT_040000534	NC_025263.1	1182512	1183327	D	protein of unknown function DUF125, transmembrane family protein; uncharacterized protein	join(1182512..1182681,1182713..1182830,1182860..1182938,1183023..1183186,1183217..1183327)	Theileria orientalis strain Shintoku	20716590
TOT_040000535	CDS	TOT_040000535	NC_025263.1	1183857	1186007	D	BTB/POZ domain containing protein; uncharacterized protein	join(1183857..1184886,1184939..1185137,1185536..1186007)	Theileria orientalis strain Shintoku	20716591
TOT_040000536	CDS	TOT_040000536	NC_025263.1	1186339	1191400	D	prefoldin domain containing protein; uncharacterized protein	join(1186339..1190694,1191098..1191400)	Theileria orientalis strain Shintoku	20716592
TOT_040000537	CDS	TOT_040000537	NC_025263.1	1191475	1193993	D	RAP domain containing protein; uncharacterized protein	join(1191475..1191799,1191831..1192119,1192220..1192372,1192423..1192585,1192629..1192724,1192812..1193122,1193331..1193811,1193892..1193993)	Theileria orientalis strain Shintoku	20716593
TOT_040000538	CDS	TOT_040000538	NC_025263.1	1194092	1194907	R	conserved hypothetical protein	complement(1194092..1194907)	Theileria orientalis strain Shintoku	20716594
TOT_040000539	CDS	TOT_040000539	NC_025263.1	1195266	1195740	D	ubiquinol-cytochrome c reductase complex	join(1195266..1195412,1195485..1195605,1195637..1195740)	Theileria orientalis strain Shintoku	20716595
TOT_040000540	CDS	TOT_040000540	NC_025263.1	1195825	1197954	R	U4/U6-associated splicing factor	complement(join(1195825..1196090,1196130..1196286,1196503..1196868,1197001..1197141,1197174..1197204,1197406..1197572,1197610..1197954))	Theileria orientalis strain Shintoku	20716596
TOT_040000541	CDS	TOT_040000541	NC_025263.1	1198445	1199147	R	snoRNP protein	complement(join(1198445..1198711,1198782..1198933,1198968..1199006,1199072..1199147))	Theileria orientalis strain Shintoku	20716597
TOT_040000542	CDS	TOT_040000542	NC_025263.1	1199369	1200389	D	ribosomal RNA methyltransferase	join(1199369..1199464,1199500..1199691,1199724..1199816,1199846..1199944,1199999..1200125,1200271..1200389)	Theileria orientalis strain Shintoku	20716598
TOT_040000543	CDS	TOT_040000543	NC_025263.1	1200399	1201851	R	methylase	complement(join(1200399..1200506,1200517..1201851))	Theileria orientalis strain Shintoku	20716599
TOT_040000544	CDS	TOT_040000544	NC_025263.1	1202157	1211423	D	conserved hypothetical protein	join(1202157..1205955,1206799..1206815,1206840..1207210,1207331..1208846,1208985..1209973,1210319..1211423)	Theileria orientalis strain Shintoku	20716600
TOT_040000545	CDS	TOT_040000545	NC_025263.1	1211543	1214043	D	conserved hypothetical protein	join(1211543..1212841,1212883..1212922,1213067..1213480,1213539..1213889,1213952..1214043)	Theileria orientalis strain Shintoku	20716601
TOT_040000546	CDS	TOT_040000546	NC_025263.1	1214355	1216071	R	predicted protein	complement(join(1214355..1215011,1215210..1215880,1215924..1216071))	Theileria orientalis strain Shintoku	20716602
TOT_040000547	CDS	TOT_040000547	NC_025263.1	1217020	1217457	D	snRNP protein	join(1217020..1217115,1217161..1217241,1217275..1217457)	Theileria orientalis strain Shintoku	20716603
TOT_040000548	CDS	TOT_040000548	NC_025263.1	1217909	1221322	D	conserved hypothetical protein	join(1217909..1218939,1218994..1220085,1220353..1221322)	Theileria orientalis strain Shintoku	20716604
TOT_040000549	CDS	TOT_040000549	NC_025263.1	1221552	1223415	D	microfibrillar-associated protein	join(1221552..1221680,1221741..1221861,1221896..1221984,1222021..1222515,1222672..1222746,1222872..1223223,1223375..1223415)	Theileria orientalis strain Shintoku	20716605
TOT_040000550	CDS	TOT_040000550	NC_025263.1	1223523	1225092	R	conserved hypothetical protein	complement(join(1223523..1223672,1223771..1223881,1223961..1224419,1224452..1224566,1224596..1224726,1224790..1224939,1224979..1225092))	Theileria orientalis strain Shintoku	20716606
TOT_040000551	CDS	TOT_040000551	NC_025263.1	1225270	1226964	D	WD40 repeat-like domain containing protein; uncharacterized protein	1225270..1226964	Theileria orientalis strain Shintoku	20716607
TOT_040000552	CDS	TOT_040000552	NC_025263.1	1227409	1231244	D	Ran-binding protein	join(1227409..1227963,1228157..1228925,1228956..1229432,1229668..1231244)	Theileria orientalis strain Shintoku	20716608
TOT_040000553	CDS	TOT_040000553	NC_025263.1	1231768	1235607	R	DEAD-box family helicase	complement(join(1231768..1232421,1232616..1232947,1233043..1233319,1233359..1233634,1233711..1233869,1233966..1234088,1234153..1235118,1235179..1235607))	Theileria orientalis strain Shintoku	20716609
TOT_040000554	CDS	TOT_040000554	NC_025263.1	1235753	1238139	R	peptidase S9A, prolyl oligopeptidase family protein; uncharacterized protein	complement(join(1235753..1236345,1236378..1238139))	Theileria orientalis strain Shintoku	20716610
TOT_040000555	CDS	TOT_040000555	NC_025263.1	1238543	1239591	D	proteasome subunit alpha type	join(1238543..1238618,1238659..1238771,1238835..1238916,1238960..1239115,1239155..1239237,1239271..1239591)	Theileria orientalis strain Shintoku	20716611
TOT_040000556	CDS	TOT_040000556	NC_025263.1	1239886	1241568	R	tyrosyl-tRNA synthetase	complement(join(1239886..1239948,1239985..1240118,1240161..1240296,1240463..1240790,1240856..1240945,1240975..1241042,1241077..1241568))	Theileria orientalis strain Shintoku	20716612
TOT_040000557	CDS	TOT_040000557	NC_025263.1	1241780	1242913	R	conserved hypothetical protein	complement(join(1241780..1241824,1241855..1242132,1242164..1242376,1242466..1242529,1242560..1242913))	Theileria orientalis strain Shintoku	20716613
TOT_040000558	CDS	TOT_040000558	NC_025263.1	1243415	1247542	D	exoribonuclease	join(1243415..1243627,1243658..1243760,1243791..1244842,1245218..1247542)	Theileria orientalis strain Shintoku	20716614
TOT_040000559	CDS	TOT_040000559	NC_025263.1	1247597	1247932	D	conserved hypothetical protein	1247597..1247932	Theileria orientalis strain Shintoku	20716615
TOT_040000560	CDS	TOT_040000560	NC_025263.1	1248290	1253905	D	condensin subunit	join(1248290..1251097,1251173..1251606,1251655..1252084,1252121..1252127,1252191..1252415,1252470..1253905)	Theileria orientalis strain Shintoku	20716616
TOT_040000561	CDS	TOT_040000561	NC_025263.1	1253961	1254762	D	conserved hypothetical protein	join(1253961..1254047,1254081..1254380,1254529..1254762)	Theileria orientalis strain Shintoku	20716617
TOT_040000562	CDS	TOT_040000562	NC_025263.1	1255059	1257011	R	conserved hypothetical protein	complement(join(1255059..1255993,1256120..1256128,1256279..1257011))	Theileria orientalis strain Shintoku	20716618
TOT_040000563	CDS	TOT_040000563	NC_025263.1	1257622	1259397	D	thioredoxin-like domain containing protein; uncharacterized protein	join(1257622..1258215,1258387..1259397)	Theileria orientalis strain Shintoku	20716619
TOT_040000564	CDS	TOT_040000564	NC_025263.1	1259716	1261430	R	GTPase-activating protein	complement(join(1259716..1259764,1260094..1260470,1260573..1260679,1260721..1260778,1260813..1260938,1260967..1261020,1261053..1261130,1261162..1261244,1261280..1261430))	Theileria orientalis strain Shintoku	20716620
TOT_040000964	CDS	TOT_040000964	NC_025263.1	1261631	1262545	D	conserved hypothetical protein	1261631..1262545	Theileria orientalis strain Shintoku	20716984
TOT_040000566	CDS	TOT_040000566	NC_025263.1	1262636	1268161	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1262636..1262785,1262816..1262901,1263047..1263219,1263300..1263449,1263520..1263665,1263758..1264053,1264155..1264242,1264277..1268161))	Theileria orientalis strain Shintoku	20716621
TOT_040000567	CDS	TOT_040000567	NC_025263.1	1268257	1268750	D	conserved hypothetical protein	join(1268257..1268326,1268590..1268750)	Theileria orientalis strain Shintoku	20716622
TOT_040000568	CDS	TOT_040000568	NC_025263.1	1268952	1269617	D	transcription factor CBF/NF-Y/archaeal histone domain containing protein; uncharacterized protein	join(1268952..1269008,1269047..1269261,1269293..1269617)	Theileria orientalis strain Shintoku	20716623
TOT_040000569	CDS	TOT_040000569	NC_025263.1	1269705	1270786	R	replication factor C subunit	complement(join(1269705..1270600,1270639..1270786))	Theileria orientalis strain Shintoku	20716624
TOT_040000570	CDS	TOT_040000570	NC_025263.1	1271000	1274346	D	initiation factor 3 family protein; uncharacterized protein	join(1271000..1271033,1271103..1271248,1271305..1271394,1271428..1272357,1272466..1273991,1274151..1274346)	Theileria orientalis strain Shintoku	20716625
TOT_040000571	CDS	TOT_040000571	NC_025263.1	1274697	1275716	R	glyceraldehyde-3-phosphate dehydrogenase	complement(1274697..1275716)	Theileria orientalis strain Shintoku	20716626
TOT_040000572	CDS	TOT_040000572	NC_025263.1	1276336	1277593	R	cytochrome C1 precursor	complement(join(1276336..1277451,1277519..1277593))	Theileria orientalis strain Shintoku	20716627
TOT_040000573	CDS	TOT_040000573	NC_025263.1	1278395	1279174	D	zinc finger, U1-type domain containing protein; uncharacterized protein	1278395..1279174	Theileria orientalis strain Shintoku	20716628
TOT_040000574	CDS	TOT_040000574	NC_025263.1	1279582	1280988	R	syntaxin	complement(join(1279582..1279824,1279864..1279941,1280169..1280255,1280286..1280698,1280850..1280988))	Theileria orientalis strain Shintoku	20716629
TOT_040000575	CDS	TOT_040000575	NC_025263.1	1281095	1281878	R	60S ribosomal protein L13	complement(join(1281095..1281271,1281343..1281620,1281653..1281791,1281867..1281878))	Theileria orientalis strain Shintoku	20716630
TOT_040000576	CDS	TOT_040000576	NC_025263.1	1282380	1286307	D	phosphatidylinositol 3- and 4-kinase, catalytic domain containing protein; uncharacterized protein	join(1282380..1284568,1284719..1285646,1285861..1286307)	Theileria orientalis strain Shintoku	20716631
TOT_040000577	CDS	TOT_040000577	NC_025263.1	1286531	1290021	R	arginyl-tRNA synthetase	complement(join(1286531..1286702,1286845..1287265,1287360..1287523,1287711..1288311,1288344..1288435,1288548..1288641,1288695..1288826,1288901..1289030,1289392..1289501,1289562..1289648,1289703..1289718,1289749..1290021))	Theileria orientalis strain Shintoku	20716632
TOT_040000578	CDS	TOT_040000578	NC_025263.1	1290274	1290819	D	conserved hypothetical protein	1290274..1290819	Theileria orientalis strain Shintoku	20716633
TOT_040000579	CDS	TOT_040000579	NC_025263.1	1291000	1291371	D	50S ribosomal protein L14	1291000..1291371	Theileria orientalis strain Shintoku	20716634
TOT_040000580	CDS	TOT_040000580	NC_025263.1	1291664	1292571	R	vacuolar H+-ATPase subunit	complement(join(1291664..1291852,1292103..1292182,1292271..1292429,1292499..1292571))	Theileria orientalis strain Shintoku	20716635
TOT_040000581	CDS	TOT_040000581	NC_025263.1	1294339	1295544	D	cyclin, N-terminal domain containing protein; uncharacterized protein	1294339..1295544	Theileria orientalis strain Shintoku	20716636
TOT_040000582	CDS	TOT_040000582	NC_025263.1	1295817	1297059	D	proteasome subunit	join(1295817..1295869,1295902..1296009,1296121..1296190,1296427..1296568,1296601..1296707,1296789..1296897,1296986..1297059)	Theileria orientalis strain Shintoku	20716637
TOT_040000583	CDS	TOT_040000583	NC_025263.1	1297234	1298721	R	conserved hypothetical protein	complement(1297234..1298721)	Theileria orientalis strain Shintoku	20716638
TOT_040000965	CDS	TOT_040000965	NC_025263.1	1299182	1300067	R	splicing factor	complement(join(1299182..1299468,1299544..1299724,1299756..1300067))	Theileria orientalis strain Shintoku	20716985
TOT_040000585	CDS	TOT_040000585	NC_025263.1	1300632	1305271	D	transcription modulator	join(1300632..1300801,1300954..1301042,1301111..1301217,1301297..1301440,1301495..1301671,1301760..1301951,1302068..1302285,1302512..1302802,1302837..1303053,1303379..1304199,1304466..1304709,1304888..1305271)	Theileria orientalis strain Shintoku	20716639
TOT_040000586	CDS	TOT_040000586	NC_025263.1	1305480	1306811	D	conserved hypothetical protein	1305480..1306811	Theileria orientalis strain Shintoku	20716640
TOT_040000587	CDS	TOT_040000587	NC_025263.1	1306814	1306957	R	hypothetical protein	complement(1306814..1306957)	Theileria orientalis strain Shintoku	20716641
TOT_040000588	CDS	TOT_040000588	NC_025263.1	1307033	1307788	D	40S ribosomal protein S9	join(1307033..1307095,1307178..1307331,1307451..1307788)	Theileria orientalis strain Shintoku	20716642
TOT_040000589	CDS	TOT_040000589	NC_025263.1	1308102	1308713	D	conserved hypothetical protein	join(1308102..1308234,1308351..1308550,1308612..1308713)	Theileria orientalis strain Shintoku	20716643
TOT_040000590	CDS	TOT_040000590	NC_025263.1	1309052	1310139	R	conserved hypothetical protein	complement(join(1309052..1309438,1309510..1309746,1309786..1310139))	Theileria orientalis strain Shintoku	20716644
TOT_040000591	CDS	TOT_040000591	NC_025263.1	1310348	1312451	R	von Willebrand factor, type A domain containing protein; uncharacterized protein	complement(join(1310348..1310445,1310477..1311628,1311719..1312264,1312382..1312451))	Theileria orientalis strain Shintoku	20716645
TOT_040000592	CDS	TOT_040000592	NC_025263.1	1312969	1313673	R	conserved hypothetical protein	complement(1312969..1313673)	Theileria orientalis strain Shintoku	20716646
TOT_040000593	CDS	TOT_040000593	NC_025263.1	1313993	1317587	R	cell surface/extracellular protein	complement(join(1313993..1314119,1314237..1314280,1314369..1314475,1314588..1317332,1317536..1317587))	Theileria orientalis strain Shintoku	20716647
TOT_040000594	CDS	TOT_040000594	NC_025263.1	1318208	1318635	D	U6 snRNP protein Lsm2	join(1318208..1318210,1318302..1318466,1318501..1318635)	Theileria orientalis strain Shintoku	20716648
TOT_040000595	CDS	TOT_040000595	NC_025263.1	1318671	1319661	R	bis-(5'-nucleosyl)-tetraphosphatase	complement(join(1318671..1318779,1318845..1318954,1319089..1319195,1319298..1319405,1319652..1319661))	Theileria orientalis strain Shintoku	20716649
TOT_040000596	CDS	TOT_040000596	NC_025263.1	1319665	1321622	D	RNA polymerase II accessory factor, Cdc73 family protein; uncharacterized protein	join(1319665..1320262,1320410..1320625,1320768..1320923,1320999..1321224,1321375..1321438,1321491..1321622)	Theileria orientalis strain Shintoku	20716650
TOT_040000966	CDS	TOT_040000966	NC_025263.1	1321951	1322582	D	Os07g0467200 protein; uncharacterized protein	join(1321951..1322019,1322103..1322204,1322267..1322426,1322467..1322582)	Theileria orientalis strain Shintoku	20716986
TOT_040000598	CDS	TOT_040000598	NC_025263.1	1322878	1323432	R	conserved hypothetical protein	complement(1322878..1323432)	Theileria orientalis strain Shintoku	20716651
TOT_040000599	CDS	TOT_040000599	NC_025263.1	1324161	1325606	R	zinc finger, DHHC-type domain containing protein; uncharacterized protein	complement(1324161..1325606)	Theileria orientalis strain Shintoku	20716652
TOT_040000600	CDS	TOT_040000600	NC_025263.1	1326512	1327697	D	protein of unknown function DUF1014 family protein; uncharacterized protein	join(1326512..1326667,1326760..1326867,1326976..1327059,1327130..1327223,1327294..1327358,1327465..1327560,1327659..1327697)	Theileria orientalis strain Shintoku	20716653
TOT_040000601	CDS	TOT_040000601	NC_025263.1	1327859	1328488	D	hypothetical protein	1327859..1328488	Theileria orientalis strain Shintoku	20716654
TOT_040000602	CDS	TOT_040000602	NC_025263.1	1328666	1329118	R	DSS1/SEM1 family protein; uncharacterized protein	complement(join(1328666..1328754,1328856..1328918,1328998..1329118))	Theileria orientalis strain Shintoku	20716655
TOT_040000603	CDS	TOT_040000603	NC_025263.1	1329356	1332121	R	coat protein, gamma subunit	complement(1329356..1332121)	Theileria orientalis strain Shintoku	20716656
TOT_040000604	CDS	TOT_040000604	NC_025263.1	1332655	1332919	R	CRIPT protein	complement(join(1332655..1332733,1332765..1332822,1332856..1332919))	Theileria orientalis strain Shintoku	20716657
TOT_040000605	CDS	TOT_040000605	NC_025263.1	1333051	1335909	R	dynamin	complement(join(1333051..1334093,1334301..1334838,1334925..1335656,1335862..1335909))	Theileria orientalis strain Shintoku	20716658
TOT_040000606	CDS	TOT_040000606	NC_025263.1	1336221	1337288	D	conserved hypothetical protein	1336221..1337288	Theileria orientalis strain Shintoku	20716659
TOT_040000607	CDS	TOT_040000607	NC_025263.1	1337460	1338788	D	glycoprotein endopeptidase	join(1337460..1338300,1338357..1338497,1338670..1338788)	Theileria orientalis strain Shintoku	20716660
TOT_040000608	CDS	TOT_040000608	NC_025263.1	1339212	1340892	R	26S proteasome subunit	complement(join(1339212..1339308,1339393..1339649,1339843..1339983,1340078..1340169,1340201..1340264,1340301..1340441,1340505..1340593,1340631..1340892))	Theileria orientalis strain Shintoku	20716661
TOT_040000609	CDS	TOT_040000609	NC_025263.1	1341830	1342468	D	conserved hypothetical protein	1341830..1342468	Theileria orientalis strain Shintoku	20716662
TOT_040000610	CDS	TOT_040000610	NC_025263.1	1342495	1342614	R	hypothetical protein	complement(1342495..1342614)	Theileria orientalis strain Shintoku	20716663
TOT_040000611	CDS	TOT_040000611	NC_025263.1	1342638	1344094	R	tRNA/rRNA methyltransferase, SpoU domain containing protein; uncharacterized protein	complement(join(1342638..1342883,1342947..1343129,1343192..1343440,1343528..1343699,1343769..1344094))	Theileria orientalis strain Shintoku	20716664
TOT_040000612	CDS	TOT_040000612	NC_025263.1	1344178	1345363	R	protein phosphatase regulator subunit	complement(join(1344178..1344426,1344458..1344544,1344576..1344731,1344762..1344896,1344926..1345025,1345055..1345185,1345229..1345363))	Theileria orientalis strain Shintoku	20716665
TOT_040000613	CDS	TOT_040000613	NC_025263.1	1345741	1347172	R	G protein beta subunit-like polypeptide	complement(join(1345741..1346172,1346372..1346793,1347031..1347172))	Theileria orientalis strain Shintoku	20716666
TOT_040000614	CDS	TOT_040000614	NC_025263.1	1347925	1351910	R	RNA polymerase II-associated protein 1, C-terminal domain containing protein; uncharacterized protein	complement(join(1347925..1349724,1349901..1351560,1351591..1351910))	Theileria orientalis strain Shintoku	20716667
TOT_040000615	CDS	TOT_040000615	NC_025263.1	1352319	1353937	D	conserved hypothetical protein	join(1352319..1353155,1353194..1353259,1353297..1353383,1353414..1353526,1353558..1353619,1353737..1353819,1353854..1353937)	Theileria orientalis strain Shintoku	20716668
TOT_040000616	CDS	TOT_040000616	NC_025263.1	1354130	1358683	R	ABC transporter related domain containing protein; uncharacterized protein	complement(join(1354130..1358039,1358154..1358683))	Theileria orientalis strain Shintoku	20716669
TOT_040000617	CDS	TOT_040000617	NC_025263.1	1359229	1363767	R	ABC transporter related domain containing protein; uncharacterized protein	complement(1359229..1363767)	Theileria orientalis strain Shintoku	20716670
TOT_040000618	CDS	TOT_040000618	NC_025263.1	1364123	1366389	D	NLE domain containing protein; uncharacterized protein	join(1364123..1364143,1364225..1364289,1364324..1364512,1364639..1364681,1364758..1364892,1364908..1364973,1365128..1365395,1365533..1365690,1365807..1365933,1366124..1366389)	Theileria orientalis strain Shintoku	20716671
TOT_040000619	CDS	TOT_040000619	NC_025263.1	1366578	1368568	D	RNA polymerase III subunit RPC82-related, helix-turn-helix domain containing protein; uncharacterized protein	join(1366578..1366983,1367014..1367096,1367268..1367432,1367581..1367815,1367883..1367946,1367982..1368081,1368111..1368200,1368235..1368303,1368335..1368423,1368454..1368568)	Theileria orientalis strain Shintoku	20716672
TOT_040000620	CDS	TOT_040000620	NC_025263.1	1368963	1370566	D	conserved hypothetical protein	join(1368963..1369116,1369148..1369278,1369458..1369625,1369773..1369856,1369886..1369990,1370156..1370278,1370309..1370566)	Theileria orientalis strain Shintoku	20716673
TOT_040000621	CDS	TOT_040000621	NC_025263.1	1370921	1371454	D	60S ribosomal protein L12	join(1370921..1370957,1370994..1371454)	Theileria orientalis strain Shintoku	20716674
TOT_040000622	CDS	TOT_040000622	NC_025263.1	1371603	1377489	D	Miro-like domain containing protein; uncharacterized protein	join(1371603..1371796,1371877..1371949,1371979..1372076,1372114..1372171,1372262..1372426,1372558..1372643,1372678..1372839,1372870..1372958,1372991..1373163,1373196..1373264,1373433..1374617,1374778..1374931,1374976..1375331,1375533..1376164,1376264..1376459,1376613..1376777,1376812..1376883,1376987..1377145,1377225..1377317,1377358..1377489)	Theileria orientalis strain Shintoku	20716675
TOT_040000623	CDS	TOT_040000623	NC_025263.1	1377552	1378397	D	thioredoxin-like fold domain containing protein; uncharacterized protein	1377552..1378397	Theileria orientalis strain Shintoku	20716676
TOT_040000624	CDS	TOT_040000624	NC_025263.1	1378489	1380010	R	tRNA-pseudouridine synthase I	complement(join(1378489..1378683,1378713..1378785,1378871..1378968,1379035..1379117,1379164..1379299,1379433..1379561,1379594..1380010))	Theileria orientalis strain Shintoku	20716677
TOT_040000625	CDS	TOT_040000625	NC_025263.1	1380963	1381537	D	40S ribosomal protein S11	join(1380963..1381128,1381170..1381347,1381432..1381537)	Theileria orientalis strain Shintoku	20716678
TOT_040000626	CDS	TOT_040000626	NC_025263.1	1382583	1390780	D	conserved hypothetical protein	join(1382583..1382790,1382808..1382881,1382914..1383255,1383342..1383608,1383641..1390780)	Theileria orientalis strain Shintoku	20716679
TOT_040000627	CDS	TOT_040000627	NC_025263.1	1391013	1391264	D	BolA-like protein	1391013..1391264	Theileria orientalis strain Shintoku	20716680
TOT_040000628	CDS	TOT_040000628	NC_025263.1	1392007	1393068	D	conserved hypothetical protein	1392007..1393068	Theileria orientalis strain Shintoku	20716681
TOT_040000967	CDS	TOT_040000967	NC_025263.1	1394263	1395151	R	conserved hypothetical protein	complement(join(1394263..1394522,1394555..1394668,1394700..1394764,1394794..1394921,1395002..1395151))	Theileria orientalis strain Shintoku	20716987
TOT_040000630	CDS	TOT_040000630	NC_025263.1	1395452	1396344	D	conserved hypothetical protein	join(1395452..1395521,1395557..1396344)	Theileria orientalis strain Shintoku	20716682
TOT_040000968	CDS	TOT_040000968	NC_025263.1	1397373	1398938	D	conserved hypothetical protein	1397373..1398938	Theileria orientalis strain Shintoku	20716988
TOT_040000969	CDS	TOT_040000969	NC_025263.1	1399494	1400347	D	tubulin polymerization-promoting protein	join(1399494..1399550,1399586..1400347)	Theileria orientalis strain Shintoku	20716989
TOT_040000632	CDS	TOT_040000632	NC_025263.1	1400735	1404419	R	eukaryotic translation initiation factor	complement(join(1400735..1400851,1401085..1401376,1401718..1401842,1401928..1402065,1402233..1402330,1402532..1402679,1402766..1402881,1403172..1404077,1404178..1404267,1404299..1404419))	Theileria orientalis strain Shintoku	20716683
TOT_040000633	CDS	TOT_040000633	NC_025263.1	1405169	1406427	D	prenyltransferase	join(1405169..1405231,1405266..1405459,1405491..1405654,1405779..1405855,1405887..1406090,1406132..1406274,1406325..1406427)	Theileria orientalis strain Shintoku	20716684
TOT_040000634	CDS	TOT_040000634	NC_025263.1	1406783	1407190	R	40S ribosomal protein S24	complement(1406783..1407190)	Theileria orientalis strain Shintoku	20716685
TOT_040000635	CDS	TOT_040000635	NC_025263.1	1407613	1407813	R	hypothetical protein	complement(join(1407613..1407773,1407807..1407813))	Theileria orientalis strain Shintoku	20716686
TOT_040000636	CDS	TOT_040000636	NC_025263.1	1407901	1410834	R	DEAD-box family helicase	complement(join(1407901..1408085,1408118..1408378,1408434..1408749,1408789..1408993,1409028..1409147,1409178..1409294,1409536..1409624,1409656..1409835,1409876..1410015,1410047..1410440,1410473..1410598,1410637..1410834))	Theileria orientalis strain Shintoku	20716687
TOT_040000637	CDS	TOT_040000637	NC_025263.1	1410893	1413158	D	LisH dimerisation motif domain containing protein; uncharacterized protein	join(1410893..1410968,1411158..1411305,1411392..1411624,1411655..1411773,1411805..1411882,1411914..1413158)	Theileria orientalis strain Shintoku	20716688
TOT_040000638	CDS	TOT_040000638	NC_025263.1	1413477	1415699	R	RNA-binding protein Puf1	complement(join(1413477..1415130,1415176..1415571,1415647..1415699))	Theileria orientalis strain Shintoku	20716689
TOT_040000639	CDS	TOT_040000639	NC_025263.1	1416244	1416396	D	hypothetical protein	1416244..1416396	Theileria orientalis strain Shintoku	20716690
TOT_040000640	CDS	TOT_040000640	NC_025263.1	1417138	1418104	D	ribonuclease CAF1 family protein; uncharacterized protein	join(1417138..1417258,1417291..1417385,1417417..1417748,1417813..1417843,1417922..1418104)	Theileria orientalis strain Shintoku	20716691
TOT_040000641	CDS	TOT_040000641	NC_025263.1	1418118	1418384	R	hypothetical protein	complement(1418118..1418384)	Theileria orientalis strain Shintoku	20716692
TOT_040000642	CDS	TOT_040000642	NC_025263.1	1418886	1421438	D	conserved hypothetical protein	join(1418886..1418987,1419026..1420780,1420945..1421040,1421072..1421170,1421310..1421438)	Theileria orientalis strain Shintoku	20716693
TOT_040000643	CDS	TOT_040000643	NC_025263.1	1421765	1422540	R	hypothetical protein	complement(join(1421765..1421839,1421916..1422002,1422014..1422240,1422246..1422447,1422454..1422540))	Theileria orientalis strain Shintoku	20716694
TOT_040000644	CDS	TOT_040000644	NC_025263.1	1423449	1427087	D	RNA polymerase I specific transcription initiation factor RRN3 family protein; uncharacterized protein	join(1423449..1423558,1423611..1425500,1425654..1426209,1426429..1426728,1426944..1427087)	Theileria orientalis strain Shintoku	20716695
TOT_040000645	CDS	TOT_040000645	NC_025263.1	1427338	1428072	R	AMMECR1 family protein; uncharacterized protein	complement(join(1427338..1427485,1427515..1427588,1427620..1427726,1427763..1427824,1427855..1427946,1427986..1428072))	Theileria orientalis strain Shintoku	20716696
TOT_040000646	CDS	TOT_040000646	NC_025263.1	1428827	1430326	D	conserved hypothetical protein	1428827..1430326	Theileria orientalis strain Shintoku	20716697
TOT_040000647	CDS	TOT_040000647	NC_025263.1	1430439	1431258	R	thioredoxin fold domain containing protein; uncharacterized protein	complement(join(1430439..1430892,1430924..1431125,1431219..1431258))	Theileria orientalis strain Shintoku	20716698
TOT_040000648	CDS	TOT_040000648	NC_025263.1	1431588	1433109	D	translation elongation factor EFTs/EF1B family protein; uncharacterized protein	join(1431588..1431951,1431990..1432627,1432701..1432850,1432936..1433109)	Theileria orientalis strain Shintoku	20716699
TOT_040000649	CDS	TOT_040000649	NC_025263.1	1433219	1436186	R	vesicle transport protein	complement(join(1433219..1433296,1433457..1433702,1433847..1434109,1434179..1434454,1434647..1435620,1435816..1435880,1435938..1436186))	Theileria orientalis strain Shintoku	20716700
TOT_040000650	CDS	TOT_040000650	NC_025263.1	1436377	1438481	R	RabGAP/TBC domain containing protein; uncharacterized protein	complement(join(1436377..1436476,1436509..1437085,1437195..1437296,1437328..1437404,1437440..1437504,1437600..1438481))	Theileria orientalis strain Shintoku	20716701
TOT_040000651	CDS	TOT_040000651	NC_025263.1	1439001	1441211	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1439001..1439033,1439103..1439176,1439208..1439334,1439364..1439525,1439556..1439644,1439674..1439778,1439809..1439892,1439984..1440159,1440192..1440423,1440564..1440780,1440890..1441051,1441086..1441211)	Theileria orientalis strain Shintoku	20716702
TOT_040000652	CDS	TOT_040000652	NC_025263.1	1441573	1444422	R	conserved hypothetical protein	complement(1441573..1444422)	Theileria orientalis strain Shintoku	20716703
TOT_040000653	CDS	TOT_040000653	NC_025263.1	1444625	1447654	D	zinc finger, Mcm10/DnaG-type domain containing protein; uncharacterized protein	join(1444625..1444628,1444679..1444784,1445572..1446718,1446748..1447092,1447127..1447189,1447220..1447491,1447525..1447654)	Theileria orientalis strain Shintoku	20716704
TOT_040000654	CDS	TOT_040000654	NC_025263.1	1447669	1448477	D	conserved hypothetical protein	join(1447669..1447831,1447873..1448110,1448216..1448297,1448331..1448477)	Theileria orientalis strain Shintoku	20716705
TOT_040000655	CDS	TOT_040000655	NC_025263.1	1448583	1449045	R	peptide chain release factor	complement(join(1448583..1448780,1448905..1449045))	Theileria orientalis strain Shintoku	20716706
TOT_040000656	CDS	TOT_040000656	NC_025263.1	1449101	1450011	R	peptide chain release factor	complement(join(1449101..1449594,1449993..1450011))	Theileria orientalis strain Shintoku	20716707
TOT_040000657	CDS	TOT_040000657	NC_025263.1	1450785	1455023	D	MIF4G-like, type 3 domain containing protein; uncharacterized protein	join(1450785..1451919,1452022..1454304,1454554..1455023)	Theileria orientalis strain Shintoku	20716708
TOT_040000658	CDS	TOT_040000658	NC_025263.1	1455646	1456095	R	hypothetical protein	complement(1455646..1456095)	Theileria orientalis strain Shintoku	20716709
TOT_040000659	CDS	TOT_040000659	NC_025263.1	1456217	1456566	D	hypothetical protein	join(1456217..1456296,1456381..1456460,1456511..1456566)	Theileria orientalis strain Shintoku	20716710
TOT_040000660	CDS	TOT_040000660	NC_025263.1	1456897	1459463	D	Bystin family protein; uncharacterized protein	join(1456897..1457102,1457189..1457342,1457449..1457661,1457740..1457895,1458238..1458411,1458969..1459074,1459339..1459463)	Theileria orientalis strain Shintoku	20716711
TOT_040000661	CDS	TOT_040000661	NC_025263.1	1460095	1460475	D	60S ribosomal protein L36	join(1460095..1460143,1460177..1460475)	Theileria orientalis strain Shintoku	20716712
TOT_040000662	CDS	TOT_040000662	NC_025263.1	1460582	1461234	D	conserved hypothetical protein	join(1460582..1460648,1460692..1460799,1460832..1460909,1460948..1461234)	Theileria orientalis strain Shintoku	20716713
TOT_040000663	CDS	TOT_040000663	NC_025263.1	1461555	1462831	R	26S proteasome regulatory subunit	complement(join(1461555..1461776,1461806..1461928,1462088..1462170,1462203..1462299,1462333..1462464,1462562..1462831))	Theileria orientalis strain Shintoku	20716714
TOT_040000970	CDS	TOT_040000970	NC_025263.1	1462942	1464025	D	DnaJ domain containing protein, expressed; uncharacterized protein	join(1462942..1463085,1463179..1463266,1463304..1463448,1463480..1463582,1463613..1463725,1463844..1463874,1463903..1463974,1464005..1464025)	Theileria orientalis strain Shintoku	20716990
TOT_040000971	CDS	TOT_040000971	NC_025263.1	1464334	1465221	R	conserved hypothetical protein	complement(1464334..1465221)	Theileria orientalis strain Shintoku	20716991
TOT_040000666	CDS	TOT_040000666	NC_025263.1	1465626	1466627	R	IWS1, C-terminal family protein; uncharacterized protein	complement(1465626..1466627)	Theileria orientalis strain Shintoku	20716715
TOT_040000667	CDS	TOT_040000667	NC_025263.1	1466741	1469856	R	conserved hypothetical protein	complement(join(1466741..1467742,1468142..1468210,1468243..1469856))	Theileria orientalis strain Shintoku	20716716
TOT_040000668	CDS	TOT_040000668	NC_025263.1	1470090	1474353	D	MscS mechanosensitive ion channel family protein; uncharacterized protein	join(1470090..1470146,1470188..1470278,1470318..1470464,1470498..1470577,1470608..1470720,1470772..1471203,1471258..1471407,1471447..1471885,1471967..1472001,1472016..1473135,1473220..1474353)	Theileria orientalis strain Shintoku	20716717
TOT_040000669	CDS	TOT_040000669	NC_025263.1	1474758	1476180	R	DNA repair protein Rad51	complement(join(1474758..1474939,1475043..1475177,1475280..1475562,1475705..1475997,1476042..1476180))	Theileria orientalis strain Shintoku	20716718
TOT_040000670	CDS	TOT_040000670	NC_025263.1	1476286	1478216	R	DNA damage response protein	complement(join(1476286..1476345,1476378..1476449,1476633..1476782,1476840..1476967,1477060..1477393,1477498..1477694,1477766..1478216))	Theileria orientalis strain Shintoku	20716719
TOT_040000671	CDS	TOT_040000671	NC_025263.1	1478472	1478669	D	hypothetical protein	1478472..1478669	Theileria orientalis strain Shintoku	20716720
TOT_040000672	CDS	TOT_040000672	NC_025263.1	1478756	1482271	R	MscS mechanosensitive ion channel family protein; uncharacterized protein	complement(join(1478756..1479987,1480087..1480599,1480911..1480960,1480990..1481255,1481477..1481592,1481623..1481768,1481809..1481903,1481987..1482271))	Theileria orientalis strain Shintoku	20716721
TOT_040000673	CDS	TOT_040000673	NC_025263.1	1482356	1482502	R	hypothetical protein	complement(join(1482356..1482429,1482442..1482502))	Theileria orientalis strain Shintoku	20716722
TOT_040000674	CDS	TOT_040000674	NC_025263.1	1482521	1483065	R	hypothetical protein	complement(join(1482521..1482551,1482584..1482879,1482973..1483065))	Theileria orientalis strain Shintoku	20716723
TOT_040000675	CDS	TOT_040000675	NC_025263.1	1483125	1483612	D	hypothetical protein	join(1483125..1483145,1483207..1483411,1483434..1483612)	Theileria orientalis strain Shintoku	20716724
TOT_040000676	CDS	TOT_040000676	NC_025263.1	1483892	1490535	R	Bromodomain containing protein; uncharacterized protein	complement(join(1483892..1484330,1484562..1485055,1485635..1486701,1486957..1487193,1487346..1490319,1490425..1490535))	Theileria orientalis strain Shintoku	20716725
TOT_040000972	CDS	TOT_040000972	NC_025263.1	1490799	1493621	D	conserved hypothetical protein	join(1490799..1491567,1491667..1492027,1492250..1493118,1493341..1493621)	Theileria orientalis strain Shintoku	20716992
TOT_040000973	CDS	TOT_040000973	NC_025263.1	1493818	1494378	D	protein mago nashi homolog	join(1493818..1493849,1493888..1494006,1494089..1494378)	Theileria orientalis strain Shintoku	20716993
TOT_040000678	CDS	TOT_040000678	NC_025263.1	1494587	1496887	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1494587..1495195,1495316..1496245,1496378..1496660,1496748..1496887))	Theileria orientalis strain Shintoku	20716726
TOT_040000679	CDS	TOT_040000679	NC_025263.1	1497566	1498642	D	lipid-binding/transfer protein	1497566..1498642	Theileria orientalis strain Shintoku	20716727
TOT_040000680	CDS	TOT_040000680	NC_025263.1	1499268	1499906	D	conserved hypothetical protein	join(1499268..1499757,1499836..1499906)	Theileria orientalis strain Shintoku	20716728
TOT_040000974	CDS	TOT_040000974	NC_025263.1	1500149	1501203	R	zinc finger, CCCH-type domain containing protein; uncharacterized protein	complement(join(1500149..1500723,1500754..1500901,1501000..1501203))	Theileria orientalis strain Shintoku	20716994
TOT_040000682	CDS	TOT_040000682	NC_025263.1	1502259	1504595	D	acetyl-coenzyme A synthetase	join(1502259..1502417,1502453..1503022,1503189..1504595)	Theileria orientalis strain Shintoku	20716729
TOT_040000683	CDS	TOT_040000683	NC_025263.1	1505191	1508366	R	importin beta/transportin	complement(join(1505191..1507205,1507469..1508366))	Theileria orientalis strain Shintoku	20716730
TOT_040000684	CDS	TOT_040000684	NC_025263.1	1509455	1509858	D	thioredoxin	join(1509455..1509482,1509659..1509858)	Theileria orientalis strain Shintoku	20716731
TOT_040000685	CDS	TOT_040000685	NC_025263.1	1510080	1514560	R	protein of unknown function DUF167 family protein; uncharacterized protein	complement(join(1510080..1510243,1510327..1510414,1510472..1510532,1510609..1512146,1512192..1514369,1514507..1514560))	Theileria orientalis strain Shintoku	20716732
TOT_040000686	CDS	TOT_040000686	NC_025263.1	1515364	1516701	D	conserved hypothetical protein	join(1515364..1515409,1515505..1515600,1515630..1515782,1515867..1516013,1516142..1516194,1516234..1516345,1516451..1516701)	Theileria orientalis strain Shintoku	20716733
TOT_040000687	CDS	TOT_040000687	NC_025263.1	1516806	1522163	R	STAG domain containing protein; uncharacterized protein	complement(join(1516806..1517006,1517232..1517405,1517532..1517815,1517975..1518395,1518576..1518849,1518991..1519166,1519473..1522163))	Theileria orientalis strain Shintoku	20716734
TOT_040000688	CDS	TOT_040000688	NC_025263.1	1522582	1525740	D	gamma adaptin	1522582..1525740	Theileria orientalis strain Shintoku	20716735
TOT_040000689	CDS	TOT_040000689	NC_025263.1	1526053	1531584	R	C2 calcium-dependent membrane targeting domain containing protein; uncharacterized protein	complement(join(1526053..1526130,1526273..1526398,1526573..1527017,1527205..1527460,1527681..1528078,1528151..1531584))	Theileria orientalis strain Shintoku	20716736
TOT_040000690	CDS	TOT_040000690	NC_025263.1	1531926	1533467	R	conserved hypothetical protein	complement(join(1531926..1532043,1532080..1532191,1532221..1532478,1532502..1532547,1532578..1532802,1532842..1533220,1533274..1533467))	Theileria orientalis strain Shintoku	20716737
TOT_040000691	CDS	TOT_040000691	NC_025263.1	1534113	1540200	D	Ricin B lectin domain containing protein; uncharacterized protein	join(1534113..1534203,1534232..1534436,1534473..1534651,1534682..1534753,1534786..1534949,1534987..1535092,1535124..1535703,1535745..1536274,1536520..1537760,1537813..1537872,1537918..1538028,1538064..1538508,1538702..1538947,1539089..1539153,1539194..1540016,1540070..1540200)	Theileria orientalis strain Shintoku	20716738
TOT_040000692	CDS	TOT_040000692	NC_025263.1	1540601	1541375	R	3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; uncharacterized protein	complement(join(1540601..1540762,1540843..1541103,1541136..1541375))	Theileria orientalis strain Shintoku	20716739
TOT_040000693	CDS	TOT_040000693	NC_025263.1	1541495	1542156	D	conserved hypothetical protein	join(1541495..1541963,1541996..1542075,1542139..1542156)	Theileria orientalis strain Shintoku	20716740
TOT_040000694	CDS	TOT_040000694	NC_025263.1	1542290	1545160	D	conserved hypothetical protein	join(1542290..1542584,1542614..1542923,1542955..1543911,1544032..1544309,1544778..1545160)	Theileria orientalis strain Shintoku	20716741
TOT_040000695	CDS	TOT_040000695	NC_025263.1	1545319	1547595	R	conserved hypothetical protein	complement(join(1545319..1545921,1546077..1546090,1546299..1547595))	Theileria orientalis strain Shintoku	20716742
TOT_040000696	CDS	TOT_040000696	NC_025263.1	1547869	1549792	D	Armadillo-like helical domain containing protein; uncharacterized protein	join(1547869..1549216,1549421..1549617,1549685..1549792)	Theileria orientalis strain Shintoku	20716743
TOT_040000697	CDS	TOT_040000697	NC_025263.1	1550059	1550835	D	Hly-III related proteins family protein; uncharacterized protein	join(1550059..1550305,1550377..1550487,1550519..1550835)	Theileria orientalis strain Shintoku	20716744
TOT_040000698	CDS	TOT_040000698	NC_025263.1	1551252	1552029	D	Hly-III related proteins family protein; uncharacterized protein	join(1551252..1551558,1551592..1551699,1551731..1552029)	Theileria orientalis strain Shintoku	20716745
TOT_040000699	CDS	TOT_040000699	NC_025263.1	1552381	1553101	D	conserved hypothetical protein	join(1552381..1552639,1552726..1552836,1552869..1553101)	Theileria orientalis strain Shintoku	20716746
TOT_040000700	CDS	TOT_040000700	NC_025263.1	1554020	1554481	D	conserved hypothetical protein	1554020..1554481	Theileria orientalis strain Shintoku	20716747
TOT_040000701	CDS	TOT_040000701	NC_025263.1	1554908	1555653	D	Hly-III related proteins family protein; uncharacterized protein	join(1554908..1555166,1555199..1555306,1555340..1555653)	Theileria orientalis strain Shintoku	20716748
TOT_040000702	CDS	TOT_040000702	NC_025263.1	1556215	1556990	D	Hly-III related proteins family protein; uncharacterized protein	join(1556215..1556482,1556513..1556620,1556653..1556990)	Theileria orientalis strain Shintoku	20716749
TOT_040000703	CDS	TOT_040000703	NC_025263.1	1557336	1558078	D	Hly-III related proteins family protein; uncharacterized protein	join(1557336..1557597,1557629..1557736,1557768..1558078)	Theileria orientalis strain Shintoku	20716750
TOT_040000704	CDS	TOT_040000704	NC_025263.1	1558473	1559238	D	conserved hypothetical protein	join(1558473..1558734,1558766..1559238)	Theileria orientalis strain Shintoku	20716751
TOT_040000705	CDS	TOT_040000705	NC_025263.1	1559262	1560047	R	conserved hypothetical protein	complement(1559262..1560047)	Theileria orientalis strain Shintoku	20716752
TOT_040000706	CDS	TOT_040000706	NC_025263.1	1561288	1563662	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1561288..1561785,1561800..1562185,1562326..1562430,1562609..1563662)	Theileria orientalis strain Shintoku	20716753
TOT_040000707	CDS	TOT_040000707	NC_025263.1	1563840	1564834	D	nucleosome/chromatin assembly factor	join(1563840..1564430,1564463..1564510,1564652..1564834)	Theileria orientalis strain Shintoku	20716754
TOT_040000708	CDS	TOT_040000708	NC_025263.1	1565633	1566181	R	conserved hypothetical protein	complement(1565633..1566181)	Theileria orientalis strain Shintoku	20716755
TOT_040000709	CDS	TOT_040000709	NC_025263.1	1566973	1568133	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1566973..1567393,1567426..1567678,1567755..1567889,1567933..1568049,1568088..1568133))	Theileria orientalis strain Shintoku	20716756
TOT_040000710	CDS	TOT_040000710	NC_025263.1	1569119	1569709	R	conserved hypothetical protein	complement(1569119..1569709)	Theileria orientalis strain Shintoku	20716757
TOT_040000711	CDS	TOT_040000711	NC_025263.1	1570596	1571727	R	filament assembling protein	complement(join(1570596..1570952,1570984..1571187,1571219..1571466,1571499..1571727))	Theileria orientalis strain Shintoku	20716758
TOT_040000712	CDS	TOT_040000712	NC_025263.1	1572428	1573203	R	conserved hypothetical protein	complement(join(1572428..1573020,1573122..1573203))	Theileria orientalis strain Shintoku	20716759
TOT_040000975	CDS	TOT_040000975	NC_025263.1	1573944	1577076	R	0; Conserved hypothetical protein	complement(join(1573944..1574459,1574910..1576939,1576983..1577076))	Theileria orientalis strain Shintoku	20716995
TOT_040000713	CDS	TOT_040000713	NC_025263.1	1577144	1578711	R	CTP-phosphoethanolamine cytidylyltransferase	complement(join(1577144..1577380,1577539..1578056,1578306..1578711))	Theileria orientalis strain Shintoku	20716760
TOT_040000714	CDS	TOT_040000714	NC_025263.1	1578892	1579611	D	conserved hypothetical protein	1578892..1579611	Theileria orientalis strain Shintoku	20716761
TOT_040000715	CDS	TOT_040000715	NC_025263.1	1579704	1584779	D	conserved hypothetical protein	join(1579704..1581474,1581718..1581997,1582061..1582402,1582437..1582788,1583037..1583961,1584076..1584779)	Theileria orientalis strain Shintoku	20716762
TOT_040000716	CDS	TOT_040000716	NC_025263.1	1584921	1587671	R	Plasmodium falciparum CPW-WPC repeat containing protein	complement(join(1584921..1584987,1585063..1585157,1585304..1585487,1585570..1585836,1585928..1586054,1586123..1586213,1586267..1586560,1586622..1586724,1586822..1587315,1587348..1587463,1587533..1587671))	Theileria orientalis strain Shintoku	20716763
TOT_040000717	CDS	TOT_040000717	NC_025263.1	1588108	1592011	D	splicing factor 3b subunit	join(1588108..1588438,1588524..1592011)	Theileria orientalis strain Shintoku	20716764
TOT_040000718	CDS	TOT_040000718	NC_025263.1	1593021	1593215	D	hypothetical protein	1593021..1593215	Theileria orientalis strain Shintoku	20716765
TOT_040000719	CDS	TOT_040000719	NC_025263.1	1594173	1595181	D	Ran binding protein 1	join(1594173..1594607,1594750..1595181)	Theileria orientalis strain Shintoku	20716766
TOT_040000720	CDS	TOT_040000720	NC_025263.1	1595460	1595999	R	50S ribosomal protein L7Ae	complement(1595460..1595999)	Theileria orientalis strain Shintoku	20716767
TOT_040000976	CDS	TOT_040000976	NC_025263.1	1596709	1596909	D	glutaredoxin-related protein family protein; uncharacterized protein	1596709..1596909	Theileria orientalis strain Shintoku	20716996
TOT_040000722	CDS	TOT_040000722	NC_025263.1	1597844	1602160	D	conserved hypothetical protein	join(1597844..1599521,1599981..1600034,1600173..1600833,1600903..1602160)	Theileria orientalis strain Shintoku	20716768
TOT_040000723	CDS	TOT_040000723	NC_025263.1	1602636	1606769	R	molecular chaperone ClpB	complement(join(1602636..1603182,1603425..1603909,1604169..1604381,1604461..1604719,1604897..1605030,1605151..1605419,1605496..1605769,1605805..1605969,1606044..1606769))	Theileria orientalis strain Shintoku	20716769
TOT_040000724	CDS	TOT_040000724	NC_025263.1	1607538	1609069	D	peptidase C48, SUMO/Sentrin/Ubl1 family protein; uncharacterized protein	join(1607538..1607543,1607573..1609069)	Theileria orientalis strain Shintoku	20716770
TOT_040000725	CDS	TOT_040000725	NC_025263.1	1609073	1609319	R	hypothetical protein	complement(join(1609073..1609200,1609289..1609319))	Theileria orientalis strain Shintoku	20716771
TOT_040000726	CDS	TOT_040000726	NC_025263.1	1609410	1612331	D	conserved hypothetical protein	join(1609410..1610891,1610943..1611578,1611660..1611812,1611987..1612331)	Theileria orientalis strain Shintoku	20716772
TOT_040000727	CDS	TOT_040000727	NC_025263.1	1612614	1614044	R	conserved hypothetical protein	complement(join(1612614..1612783,1612922..1613151,1613192..1613377,1613529..1613625,1613714..1614044))	Theileria orientalis strain Shintoku	20716773
TOT_040000977	CDS	TOT_040000977	NC_025263.1	1614292	1614907	D	sedlin family protein; uncharacterized protein	join(1614292..1614342,1614530..1614623,1614714..1614907)	Theileria orientalis strain Shintoku	20716997
TOT_040000978	CDS	TOT_040000978	NC_025263.1	1615842	1616846	D	small heat-shock protein	join(1615842..1615928,1616105..1616330,1616509..1616846)	Theileria orientalis strain Shintoku	20716998
TOT_040000730	CDS	TOT_040000730	NC_025263.1	1616961	1618013	R	ATP-dependent Clp protease proteolytic subunit	complement(join(1616961..1617199,1617300..1617485,1617524..1617704,1617753..1618013))	Theileria orientalis strain Shintoku	20716774
TOT_040000731	CDS	TOT_040000731	NC_025263.1	1618047	1618414	D	hypothetical protein	join(1618047..1618135,1618231..1618414)	Theileria orientalis strain Shintoku	20716775
TOT_040000732	CDS	TOT_040000732	NC_025263.1	1618503	1620061	R	concanavalin A-like lectin/glucanase domain containing protein; uncharacterized protein	complement(join(1618503..1618634,1618671..1618788,1618821..1618912,1618997..1619100,1619247..1619391,1619553..1619609,1619687..1620061))	Theileria orientalis strain Shintoku	20716776
TOT_040000733	CDS	TOT_040000733	NC_025263.1	1620625	1624709	D	predicted protein	join(1620625..1620730,1620806..1623296,1623378..1623725,1623930..1624154,1624368..1624446,1624542..1624709)	Theileria orientalis strain Shintoku	20716777
TOT_040000734	CDS	TOT_040000734	NC_025263.1	1625266	1627608	D	DNA repair protein (XPGC)/yeast Rad family protein; uncharacterized protein	join(1625266..1626074,1626117..1626204,1626250..1627235,1627287..1627608)	Theileria orientalis strain Shintoku	20716778
TOT_040000735	CDS	TOT_040000735	NC_025263.1	1627852	1631061	R	hypothetical protein	complement(join(1627852..1627919,1627956..1631061))	Theileria orientalis strain Shintoku	20716779
TOT_040000736	CDS	TOT_040000736	NC_025263.1	1631966	1632679	R	P29; uncharacterized protein	complement(join(1631966..1632454,1632551..1632679))	Theileria orientalis strain Shintoku	20716780
TOT_040000737	CDS	TOT_040000737	NC_025263.1	1633757	1634388	D	40S ribosomal protein S20	join(1633757..1633859,1634030..1634143,1634255..1634388)	Theileria orientalis strain Shintoku	20716781
TOT_040000738	CDS	TOT_040000738	NC_025263.1	1634703	1635499	D	GNAT-family N-acetyltransferase	join(1634703..1634884,1635045..1635142,1635204..1635303,1635418..1635499)	Theileria orientalis strain Shintoku	20716782
TOT_040000739	CDS	TOT_040000739	NC_025263.1	1635779	1636370	D	conserved hypothetical protein	join(1635779..1635829,1636032..1636190,1636308..1636370)	Theileria orientalis strain Shintoku	20716783
TOT_040000740	CDS	TOT_040000740	NC_025263.1	1636461	1639079	D	GTP-binding protein, HSR1-related domain containing protein; uncharacterized protein	join(1636461..1638058,1638263..1638361,1638524..1638942,1639021..1639079)	Theileria orientalis strain Shintoku	20716784
TOT_040000741	CDS	TOT_040000741	NC_025263.1	1639220	1642016	R	ribosome-binding factor A family protein; uncharacterized protein	complement(join(1639220..1639522,1639618..1639757,1639857..1640049,1640435..1640441,1640550..1641288,1641686..1642016))	Theileria orientalis strain Shintoku	20716785
TOT_040000742	CDS	TOT_040000742	NC_025263.1	1644983	1645153	D	hypothetical protein	1644983..1645153	Theileria orientalis strain Shintoku	20716786
TOT_040000743	CDS	TOT_040000743	NC_025263.1	1645159	1646802	R	conserved hypothetical protein	complement(join(1645159..1645906,1646102..1646554,1646684..1646802))	Theileria orientalis strain Shintoku	20716787
TOT_040000744	CDS	TOT_040000744	NC_025263.1	1647457	1648564	D	conserved hypothetical protein	join(1647457..1648002,1648096..1648168,1648206..1648262,1648350..1648564)	Theileria orientalis strain Shintoku	20716788
TOT_040000745	CDS	TOT_040000745	NC_025263.1	1649449	1649886	D	conserved hypothetical protein	1649449..1649886	Theileria orientalis strain Shintoku	20716789
TOT_040000746	CDS	TOT_040000746	NC_025263.1	1650152	1660964	R	conserved hypothetical protein	complement(join(1650152..1650241,1650414..1660964))	Theileria orientalis strain Shintoku	20716790
TOT_040000979	CDS	TOT_040000979	NC_025263.1	1661038	1671504	R	conserved hypothetical protein	complement(join(1661038..1661191,1661214..1661271,1661352..1661591,1661634..1661786,1661955..1668016,1668230..1671504))	Theileria orientalis strain Shintoku	20716999
TOT_040000748	CDS	TOT_040000748	NC_025263.1	1671589	1675011	D	hypothetical protein	join(1671589..1671625,1672103..1672757,1673016..1675011)	Theileria orientalis strain Shintoku	20716791
TOT_040000749	CDS	TOT_040000749	NC_025263.1	1675426	1677182	D	26S proteasome ATPase subunit	join(1675426..1675792,1675926..1676510,1676640..1676960,1676992..1677182)	Theileria orientalis strain Shintoku	20716792
TOT_040000750	CDS	TOT_040000750	NC_025263.1	1677735	1679096	D	U5 snRNP-specific subunit	join(1677735..1678059,1678229..1678443,1678626..1678768,1678823..1679096)	Theileria orientalis strain Shintoku	20716793
TOT_040000751	CDS	TOT_040000751	NC_025263.1	1679753	1681456	D	conserved hypothetical protein	1679753..1681456	Theileria orientalis strain Shintoku	20716794
TOT_040000752	CDS	TOT_040000752	NC_025263.1	1681752	1685606	R	conserved hypothetical protein	complement(join(1681752..1682753,1682850..1685606))	Theileria orientalis strain Shintoku	20716795
TOT_040000753	CDS	TOT_040000753	NC_025263.1	1686165	1687968	R	hypothetical protein	complement(join(1686165..1686576,1686607..1687001,1687045..1687392,1687454..1687786,1687876..1687968))	Theileria orientalis strain Shintoku	20716796
TOT_040000754	CDS	TOT_040000754	NC_025263.1	1688065	1691968	D	DNA repair protein (XPGC)/yeast Rad family protein; uncharacterized protein	join(1688065..1688309,1688409..1689060,1689151..1689273,1689507..1689711,1689828..1690094,1690212..1690478,1690599..1691968)	Theileria orientalis strain Shintoku	20716797
TOT_040000755	CDS	TOT_040000755	NC_025263.1	1692048	1692221	R	hypothetical protein	complement(1692048..1692221)	Theileria orientalis strain Shintoku	20716798
TOT_040000756	CDS	TOT_040000756	NC_025263.1	1692303	1693742	R	conserved hypothetical protein	complement(1692303..1693742)	Theileria orientalis strain Shintoku	20716799
TOT_040000757	CDS	TOT_040000757	NC_025263.1	1693929	1694108	D	hypothetical protein	1693929..1694108	Theileria orientalis strain Shintoku	20716800
TOT_040000758	CDS	TOT_040000758	NC_025263.1	1694165	1694453	R	hypothetical protein	complement(join(1694165..1694174,1694185..1694453))	Theileria orientalis strain Shintoku	20716801
TOT_040000759	CDS	TOT_040000759	NC_025263.1	1694483	1696003	R	conserved hypothetical protein	complement(1694483..1696003)	Theileria orientalis strain Shintoku	20716802
TOT_040000760	CDS	TOT_040000760	NC_025263.1	1696350	1696811	D	hypothetical protein	1696350..1696811	Theileria orientalis strain Shintoku	20716803
TOT_040000761	CDS	TOT_040000761	NC_025263.1	1696997	1698054	R	endosome sorting protein	complement(join(1696997..1697107,1697224..1697332,1697427..1697653,1697992..1698054))	Theileria orientalis strain Shintoku	20716804
TOT_040000762	CDS	TOT_040000762	NC_025263.1	1699121	1699444	D	translation initiation factor	1699121..1699444	Theileria orientalis strain Shintoku	20716805
TOT_040000763	CDS	TOT_040000763	NC_025263.1	1699822	1703146	D	glucose-inhibited division protein a-like protein	join(1699822..1700032,1700143..1700629,1700663..1700772,1701024..1701186,1701319..1701400,1701436..1701549,1701592..1701754,1701933..1702040,1702075..1702822,1703002..1703146)	Theileria orientalis strain Shintoku	20716806
TOT_040000764	CDS	TOT_040000764	NC_025263.1	1703224	1714179	D	serine/threonine kinase	join(1703224..1703326,1703608..1704726,1704811..1706207,1706262..1706687,1706787..1706807,1706877..1707941,1708086..1708867,1709132..1709295,1710589..1711823,1711944..1712065,1712142..1712583,1712815..1713774,1714054..1714179)	Theileria orientalis strain Shintoku	20716807
TOT_040000765	CDS	TOT_040000765	NC_025263.1	1714392	1716159	R	alpha/beta hydrolase fold-1 domain containing protein; uncharacterized protein	complement(join(1714392..1714644,1714890..1715015,1715151..1715375,1715551..1715753,1715827..1716065,1716132..1716159))	Theileria orientalis strain Shintoku	20716808
TOT_040000766	CDS	TOT_040000766	NC_025263.1	1716296	1718487	D	Pumilio RNA-binding region repeat containing protein	join(1716296..1716424,1716521..1716798,1716926..1717035,1717076..1717110,1717143..1717284,1717373..1717621,1717780..1718273,1718305..1718487)	Theileria orientalis strain Shintoku	20716809
TOT_040000767	CDS	TOT_040000767	NC_025263.1	1718616	1719979	R	leucine carboxyl methyltransferase family protein; uncharacterized protein	complement(join(1718616..1718870,1718909..1718999,1719252..1719469,1719500..1719777,1719808..1719893,1719927..1719979))	Theileria orientalis strain Shintoku	20716810
TOT_040000768	CDS	TOT_040000768	NC_025263.1	1720310	1721851	R	leucine carboxyl methyltransferase family protein; uncharacterized protein	complement(join(1720310..1720594,1720624..1720717,1720808..1720947,1720979..1721038,1721355..1721632,1721666..1721751,1721784..1721851))	Theileria orientalis strain Shintoku	20716811
TOT_040000769	CDS	TOT_040000769	NC_025263.1	1722010	1725005	R	leucine carboxyl methyltransferase	complement(join(1722010..1722303,1722385..1722570,1722679..1722738,1722790..1722918,1723008..1723285,1723316..1723401,1723432..1723553,1723626..1723823,1723888..1723981,1724045..1724106,1724137..1724184,1724214..1724273,1724306..1724434,1724481..1724752,1724829..1724914,1724944..1725005))	Theileria orientalis strain Shintoku	20716812
TOT_040000770	CDS	TOT_040000770	NC_025263.1	1725229	1726921	R	leucine carboxyl methyltransferase family protein; uncharacterized protein	complement(join(1725229..1725349,1725371..1725666,1726025..1726072,1726235..1726363,1726427..1726704,1726736..1726821,1726854..1726921))	Theileria orientalis strain Shintoku	20716813
TOT_040000771	CDS	TOT_040000771	NC_025263.1	1727482	1732065	R	structure-specific recognition protein 1	complement(join(1727482..1727631,1727646..1727834,1727867..1727957,1727996..1728057,1728169..1728228,1728262..1728325,1728373..1728437,1728535..1728812,1728844..1728927,1729250..1729490,1729531..1729621,1729650..1729711,1729740..1729787,1729963..1730026,1730074..1730138,1730236..1730513,1730543..1730628,1730660..1730736,1730904..1730993,1731237..1731299,1731368..1731500,1731505..1731674,1731772..1732065))	Theileria orientalis strain Shintoku	20716814
TOT_040000772	CDS	TOT_040000772	NC_025263.1	1732417	1732635	D	hypothetical protein	1732417..1732635	Theileria orientalis strain Shintoku	20716815
TOT_040000773	CDS	TOT_040000773	NC_025263.1	1732645	1733946	R	structure-specific recognition protein 1	complement(join(1732645..1732733,1732748..1732970,1733112..1733435,1733468..1733698,1733884..1733946))	Theileria orientalis strain Shintoku	20716816
TOT_040000980	CDS	TOT_040000980	NC_025263.1	1734274	1735228	R	60S ribosomal L1/L10a protein	complement(join(1734274..1734821,1735022..1735122,1735224..1735228))	Theileria orientalis strain Shintoku	20717000
TOT_040000775	CDS	TOT_040000775	NC_025263.1	1736000	1736841	D	hypothetical protein	join(1736000..1736047,1736074..1736227,1736313..1736378,1736524..1736570,1736731..1736841)	Theileria orientalis strain Shintoku	20716817
TOT_040000776	CDS	TOT_040000776	NC_025263.1	1737121	1738853	D	conserved hypothetical protein	join(1737121..1738426,1738530..1738594,1738743..1738853)	Theileria orientalis strain Shintoku	20716818
TOT_040000777	CDS	TOT_040000777	NC_025263.1	1739074	1741139	D	protein kinase, core domain containing protein; uncharacterized protein	join(1739074..1739193,1739601..1741139)	Theileria orientalis strain Shintoku	20716819
TOT_040000778	CDS	TOT_040000778	NC_025263.1	1741189	1745553	D	zinc finger, RING-type domain containing protein; uncharacterized protein	join(1741189..1741300,1741462..1741603,1741624..1741706,1741715..1741847,1741876..1741923,1741954..1742709,1742914..1744536,1744545..1744580,1744815..1745279,1745363..1745476,1745481..1745553)	Theileria orientalis strain Shintoku	20716820
TOT_040000779	CDS	TOT_040000779	NC_025263.1	1745678	1747473	R	WD40 repeat-like domain containing protein; uncharacterized protein	complement(join(1745678..1745799,1745913..1746022,1746099..1746196,1746378..1746524,1746650..1746844,1746913..1746990,1747114..1747242,1747402..1747473))	Theileria orientalis strain Shintoku	20716821
TOT_040000780	CDS	TOT_040000780	NC_025263.1	1747818	1749179	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1747818..1748354,1748508..1748787,1748992..1749179)	Theileria orientalis strain Shintoku	20716822
TOT_040000781	CDS	TOT_040000781	NC_025263.1	1749646	1750785	R	conserved hypothetical protein	complement(join(1749646..1749968,1750066..1750105,1750255..1750417,1750568..1750785))	Theileria orientalis strain Shintoku	20716823
TOT_040000782	CDS	TOT_040000782	NC_025263.1	1751261	1751660	D	hypothetical protein	join(1751261..1751419,1751523..1751660)	Theileria orientalis strain Shintoku	20716824
TOT_040000783	CDS	TOT_040000783	NC_025263.1	1751795	1752414	R	zinc finger, A20-type domain containing protein; uncharacterized protein	complement(join(1751795..1752262,1752388..1752414))	Theileria orientalis strain Shintoku	20716825
TOT_040000784	CDS	TOT_040000784	NC_025263.1	1754175	1756325	D	conserved hypothetical protein	1754175..1756325	Theileria orientalis strain Shintoku	20716826
TOT_040000785	CDS	TOT_040000785	NC_025263.1	1758690	1760264	R	dephospho-CoA kinase family protein; uncharacterized protein	complement(join(1758690..1759372,1759440..1759758,1759821..1760264))	Theileria orientalis strain Shintoku	20716827
TOT_040000786	CDS	TOT_040000786	NC_025263.1	1760891	1762746	D	vacuolar sorting protein 9 domain containing protein; uncharacterized protein	join(1760891..1761038,1761117..1761287,1761368..1761409,1761448..1761578,1761723..1761779,1761844..1761996,1762178..1762294,1762510..1762746)	Theileria orientalis strain Shintoku	20716828
TOT_040000787	CDS	TOT_040000787	NC_025263.1	1763250	1764128	D	histone-like bacterial DNA-binding protein family protein; uncharacterized protein	join(1763250..1763444,1763814..1764128)	Theileria orientalis strain Shintoku	20716829
TOT_040000788	CDS	TOT_040000788	NC_025263.1	1764445	1765025	R	prefoldin beta-like domain containing protein; uncharacterized protein	complement(join(1764445..1764626,1764842..1765025))	Theileria orientalis strain Shintoku	20716830
TOT_040000789	CDS	TOT_040000789	NC_025263.1	1765636	1766452	D	signal peptidase	join(1765636..1765815,1766099..1766452)	Theileria orientalis strain Shintoku	20716831
TOT_040000790	CDS	TOT_040000790	NC_025263.1	1766449	1772287	R	hypothetical protein	complement(join(1766449..1769368,1769404..1771978,1771986..1772248,1772256..1772287))	Theileria orientalis strain Shintoku	20716832
TOT_040000791	CDS	TOT_040000791	NC_025263.1	1772397	1773808	R	conserved hypothetical protein	complement(join(1772397..1772554,1772623..1772662,1772694..1772769,1772839..1772921,1773039..1773108,1773147..1773259,1773396..1773499,1773706..1773808))	Theileria orientalis strain Shintoku	20716833
TOT_040000792	CDS	TOT_040000792	NC_025263.1	1774191	1778296	D	clathrin/coatomer adaptor, adaptin-like, N-terminal domain containing protein; uncharacterized protein	join(1774191..1774271,1774359..1774430,1774533..1774656,1774734..1774807,1774980..1775194,1775249..1775562,1775620..1775841,1776041..1776488,1776710..1776892,1776990..1777247,1777418..1778052,1778124..1778296)	Theileria orientalis strain Shintoku	20716834
TOT_040000793	CDS	TOT_040000793	NC_025263.1	1779011	1780396	D	RabGAP/TBC domain containing protein; uncharacterized protein	join(1779011..1780051,1780343..1780396)	Theileria orientalis strain Shintoku	20716835
TOT_040000794	CDS	TOT_040000794	NC_025263.1	1780554	1781203	R	60S ribosomal protein L32	complement(join(1780554..1780865,1781117..1781203))	Theileria orientalis strain Shintoku	20716836
TOT_040000795	CDS	TOT_040000795	NC_025263.1	1782690	1784777	D	conserved hypothetical protein	join(1782690..1783458,1783627..1784777)	Theileria orientalis strain Shintoku	20716837
TOT_040000796	CDS	TOT_040000796	NC_025263.1	1785412	1786737	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1785412..1786737	Theileria orientalis strain Shintoku	20716838
TOT_040000797	CDS	TOT_040000797	NC_025263.1	1786904	1788224	R	conserved hypothetical protein	complement(join(1786904..1786997,1787326..1788224))	Theileria orientalis strain Shintoku	20716839
TOT_040000798	CDS	TOT_040000798	NC_025263.1	1788629	1788995	R	hypothetical protein	complement(join(1788629..1788849,1788956..1788995))	Theileria orientalis strain Shintoku	20716840
TOT_040000799	CDS	TOT_040000799	NC_025263.1	1789347	1794539	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1789347..1794539)	Theileria orientalis strain Shintoku	20716841
TOT_040000800	CDS	TOT_040000800	NC_025263.1	1794930	1795163	D	hypothetical protein	join(1794930..1794996,1795123..1795163)	Theileria orientalis strain Shintoku	20716842
TOT_040000801	CDS	TOT_040000801	NC_025263.1	1795200	1795552	R	hypothetical protein	complement(join(1795200..1795356,1795383..1795552))	Theileria orientalis strain Shintoku	20716843
TOT_040000802	CDS	TOT_040000802	NC_025263.1	1795581	1797593	R	tubulin subunit alpha	complement(join(1795581..1795953,1795986..1796258,1796325..1796619,1796786..1796893,1796979..1797078,1797113..1797230,1797532..1797593))	Theileria orientalis strain Shintoku	20716844
TOT_040000803	CDS	TOT_040000803	NC_025263.1	1798596	1799008	R	conserved hypothetical protein	complement(join(1798596..1798697,1798757..1798849,1798937..1799008))	Theileria orientalis strain Shintoku	20716845
TOT_040000804	CDS	TOT_040000804	NC_025263.1	1799337	1801197	D	conserved hypothetical protein	join(1799337..1799502,1799668..1799717,1799799..1800613,1800704..1800784,1800869..1800995,1801069..1801197)	Theileria orientalis strain Shintoku	20716846
TOT_040000805	CDS	TOT_040000805	NC_025263.1	1801245	1802645	D	conserved hypothetical protein	join(1801245..1801392,1801487..1801572,1801658..1801775,1801821..1801848,1801884..1801915,1802121..1802281,1802505..1802645)	Theileria orientalis strain Shintoku	20716847
TOT_040000806	CDS	TOT_040000806	NC_025263.1	1802865	1805306	R	T-complex protein 1 chaperonin	complement(join(1802865..1803079,1803198..1803293,1803388..1803503,1803606..1803888,1804156..1804620,1804686..1804953,1805103..1805306))	Theileria orientalis strain Shintoku	20716848
TOT_040000807	CDS	TOT_040000807	NC_025263.1	1805824	1810548	D	DEAD-box family helicase	join(1805824..1805935,1806050..1806324,1806461..1806676,1806746..1807601,1807721..1808521,1808768..1809412,1809650..1810548)	Theileria orientalis strain Shintoku	20716849
TOT_040000808	CDS	TOT_040000808	NC_025263.1	1810742	1812892	R	conserved CHP00095 family protein; uncharacterized protein	complement(join(1810742..1810936,1811070..1811150,1811265..1811366,1811532..1811600,1811725..1811827,1811952..1812016,1812160..1812281,1812408..1812596,1812871..1812892))	Theileria orientalis strain Shintoku	20716850
TOT_040000809	CDS	TOT_040000809	NC_025263.1	1813305	1814144	R	conserved hypothetical protein	complement(1813305..1814144)	Theileria orientalis strain Shintoku	20716851
TOT_040000810	CDS	TOT_040000810	NC_025263.1	1815023	1816990	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1815023..1816990)	Theileria orientalis strain Shintoku	20716852
TOT_040000811	CDS	TOT_040000811	NC_025263.1	1817010	1819273	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1817010..1817104,1818016..1819273))	Theileria orientalis strain Shintoku	20716853
TOT_040000812	CDS	TOT_040000812	NC_025263.1	1819903	1822500	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1819903..1822500)	Theileria orientalis strain Shintoku	20716854
TOT_040000813	CDS	TOT_040000813	NC_025263.1	1822564	1822818	D	hypothetical protein	join(1822564..1822567,1822667..1822818)	Theileria orientalis strain Shintoku	20716855
TOT_040000814	CDS	TOT_040000814	NC_025263.1	1824600	1830473	R	conserved hypothetical protein	complement(join(1824600..1824950,1824990..1826246,1827246..1830473))	Theileria orientalis strain Shintoku	20716856
TOT_040000815	CDS	TOT_040000815	NC_025263.1	1830972	1835135	R	conserved hypothetical protein	complement(1830972..1835135)	Theileria orientalis strain Shintoku	20716857
TOT_040000816	CDS	TOT_040000816	NC_025263.1	1835700	1839008	D	Rab GTPase activator family protein; uncharacterized protein	join(1835700..1835900,1836009..1836182,1836258..1836507,1836739..1836914,1837149..1837538,1837572..1838491,1838579..1839008)	Theileria orientalis strain Shintoku	20716858
TOT_040000817	CDS	TOT_040000817	NC_025263.1	1839374	1843588	D	WD40 repeat-like domain containing protein; uncharacterized protein	join(1839374..1839418,1839640..1839799,1839884..1840043,1840234..1840430,1840591..1840737,1840975..1841100,1841248..1841390,1841764..1842109,1842470..1843036,1843371..1843588)	Theileria orientalis strain Shintoku	20716859
TOT_040000818	CDS	TOT_040000818	NC_025263.1	1843671	1843952	R	conserved hypothetical protein	complement(join(1843671..1843763,1843860..1843952))	Theileria orientalis strain Shintoku	20716860
TOT_040000819	CDS	TOT_040000819	NC_025263.1	1845311	1848368	D	conserved hypothetical protein	join(1845311..1845413,1845622..1846476,1846624..1847195,1847250..1847483,1847609..1847703,1847741..1848368)	Theileria orientalis strain Shintoku	20716861
TOT_040000820	CDS	TOT_040000820	NC_025263.1	1848631	1850772	D	dimethyladenosine transferase	join(1848631..1848665,1848862..1849098,1849192..1849274,1849432..1849524,1849597..1849688,1849792..1850108,1850196..1850562,1850641..1850772)	Theileria orientalis strain Shintoku	20716862
TOT_040000821	CDS	TOT_040000821	NC_025263.1	1853102	1856572	D	Requim, req/dpf2	join(1853102..1855368,1855648..1856141,1856433..1856572)	Theileria orientalis strain Shintoku	20716863
TOT_040000822	CDS	TOT_040000822	NC_025263.1	1857595	1857966	D	histone H2B variant 1	1857595..1857966	Theileria orientalis strain Shintoku	20716864
TOT_040000981	CDS	TOT_040000981	NC_025263.1	1858292	1858618	R	conserved hypothetical protein	complement(join(1858292..1858363,1858508..1858618))	Theileria orientalis strain Shintoku	20717001
TOT_040000824	CDS	TOT_040000824	NC_025263.1	1859181	1860286	D	conserved hypothetical protein	join(1859181..1859377,1859537..1859624,1859759..1859848,1859883..1859973,1860078..1860286)	Theileria orientalis strain Shintoku	20716865
TOT_040000825	CDS	TOT_040000825	NC_025263.1	1860651	1861723	D	conserved hypothetical protein	join(1860651..1860834,1861022..1861258,1861443..1861723)	Theileria orientalis strain Shintoku	20716866
TOT_040000826	CDS	TOT_040000826	NC_025263.1	1862410	1864353	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(1862410..1864353)	Theileria orientalis strain Shintoku	20716867
TOT_040000827	CDS	TOT_040000827	NC_025263.1	1867288	1869531	D	conserved hypothetical protein	1867288..1869531	Theileria orientalis strain Shintoku	20716868
TOT_040000828	CDS	TOT_040000828	NC_025263.1	1870300	1871058	R	predicted protein	complement(join(1870300..1870447,1870477..1870566,1870637..1870727,1870759..1870837,1870881..1871012,1871050..1871058))	Theileria orientalis strain Shintoku	20716869
TOT_040000829	CDS	TOT_040000829	NC_025263.1	1871741	1872390	R	Sjogrens syndrome scleroderma autoantigen 1 family protein; uncharacterized protein	complement(join(1871741..1871792,1871813..1871898,1871930..1872078,1872148..1872244,1872283..1872390))	Theileria orientalis strain Shintoku	20716870
TOT_040000830	CDS	TOT_040000830	NC_025263.1	1872589	1873283	D	thioredoxin domain containing protein; uncharacterized protein	join(1872589..1872873,1872931..1873089,1873121..1873181,1873213..1873283)	Theileria orientalis strain Shintoku	20716871
TOT_040000831	CDS	TOT_040000831	NC_025263.1	1873392	1873556	D	hypothetical protein	1873392..1873556	Theileria orientalis strain Shintoku	20716872
TOT_040000832	CDS	TOT_040000832	NC_025263.1	1873579	1874172	R	Os02g0725600 protein; uncharacterized protein	complement(1873579..1874172)	Theileria orientalis strain Shintoku	20716873
TOT_040000833	CDS	TOT_040000833	NC_025263.1	1874285	1878451	D	methionine aminopeptidase	join(1874285..1874434,1874465..1874520,1874558..1874732,1874763..1874935,1874967..1875008,1875105..1875329,1875360..1875450,1875515..1875795,1876215..1877011,1877078..1877134,1877222..1877739,1878398..1878451)	Theileria orientalis strain Shintoku	20716874
TOT_040000834	CDS	TOT_040000834	NC_025263.1	1878635	1881052	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1878635..1881052	Theileria orientalis strain Shintoku	20716875
TOT_040000835	CDS	TOT_040000835	NC_025263.1	1882067	1885486	R	adenylate cyclase-associated CAP, C-terminal domain containing protein; uncharacterized protein	complement(join(1882067..1884247,1884275..1885486))	Theileria orientalis strain Shintoku	20716876
TOT_040000836	CDS	TOT_040000836	NC_025263.1	1887158	1888463	D	hypothetical protein	join(1887158..1888292,1888441..1888463)	Theileria orientalis strain Shintoku	20716877
TOT_040000837	CDS	TOT_040000837	NC_025263.1	1888555	1890204	R	DNA polymerase, beta-like region domain containing protein; uncharacterized protein	complement(join(1888555..1888846,1888988..1889408,1889493..1890204))	Theileria orientalis strain Shintoku	20716878
TOT_040000838	CDS	TOT_040000838	NC_025263.1	1890742	1893173	D	chaperonin HSP60	join(1890742..1891186,1891254..1891402,1891474..1891807,1891882..1892186,1892365..1892448,1892619..1892871,1893031..1893173)	Theileria orientalis strain Shintoku	20716879
TOT_040000839	CDS	TOT_040000839	NC_025263.1	1893400	1894817	D	conserved hypothetical protein	join(1893400..1893520,1893586..1894817)	Theileria orientalis strain Shintoku	20716880
TOT_040000840	CDS	TOT_040000840	NC_025263.1	1894956	1898029	D	ribosomal protein S5 family protein; uncharacterized protein	join(1894956..1895215,1895253..1895337,1895496..1895562,1895594..1895703,1895734..1895847,1895878..1895957,1896109..1896140,1896171..1896268,1896339..1896599,1896728..1896868,1896908..1896974,1897089..1897283,1897431..1898029)	Theileria orientalis strain Shintoku	20716881
TOT_040000841	CDS	TOT_040000841	NC_025263.1	1898518	1899072	D	conserved hypothetical protein	1898518..1899072	Theileria orientalis strain Shintoku	20716882
TOT_040000842	CDS	TOT_040000842	NC_025263.1	1899827	1900357	D	conserved hypothetical protein	1899827..1900357	Theileria orientalis strain Shintoku	20716883
TOT_040000843	CDS	TOT_040000843	NC_025263.1	1901013	1904739	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1901013..1902041,1902592..1904739))	Theileria orientalis strain Shintoku	20716884
TOT_040000844	CDS	TOT_040000844	NC_025263.1	1904950	1907571	R	superoxide dismutase	complement(join(1904950..1905071,1905102..1905227,1905346..1905537,1905613..1905657,1905710..1905800,1905822..1905841,1905855..1906069,1906102..1906201,1906237..1906288,1906376..1906524,1906628..1906714,1906745..1906871,1906908..1906977,1907025..1907149,1907179..1907315,1907520..1907571))	Theileria orientalis strain Shintoku	20716885
TOT_040000982	CDS	TOT_040000982	NC_025263.1	1907735	1909651	D	tRNA modification GTPase	join(1907735..1907920,1907973..1908093,1908122..1908218,1908252..1908321,1908353..1908418,1908480..1908667,1908708..1908763,1908830..1908986,1909054..1909529,1909590..1909651)	Theileria orientalis strain Shintoku	20717002
TOT_040000983	CDS	TOT_040000983	NC_025263.1	1910183	1911844	D	conserved hypothetical protein	join(1910183..1910503,1911449..1911844)	Theileria orientalis strain Shintoku	20717003
TOT_040000984	CDS	TOT_040000984	NC_025263.1	1912843	1915613	D	SNF2-related domain containing protein; uncharacterized protein	join(1912843..1912896,1912926..1913169,1913221..1913640,1913701..1915613)	Theileria orientalis strain Shintoku	20717004
TOT_040000848	CDS	TOT_040000848	NC_025263.1	1916191	1917771	R	conserved hypothetical protein	complement(1916191..1917771)	Theileria orientalis strain Shintoku	20716886
TOT_040000849	CDS	TOT_040000849	NC_025263.1	1918342	1920795	D	conserved hypothetical protein	1918342..1920795	Theileria orientalis strain Shintoku	20716887
TOT_040000850	CDS	TOT_040000850	NC_025263.1	1920962	1921804	D	conserved hypothetical protein	1920962..1921804	Theileria orientalis strain Shintoku	20716888
TOT_040000851	CDS	TOT_040000851	NC_025263.1	1922492	1927573	D	hypothetical protein	join(1922492..1923420,1926021..1926909,1927024..1927204,1927350..1927573)	Theileria orientalis strain Shintoku	20716889
TOT_040000985	CDS	TOT_040000985	NC_025263.1	1928315	1928451	D	26S protease regulatory subunit	join(1928315..1928378,1928441..1928451)	Theileria orientalis strain Shintoku	20717005
TOT_040000853	CDS	TOT_040000853	NC_025263.1	1931848	1934991	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	1931848..1934991	Theileria orientalis strain Shintoku	20716890
TOT_040000854	CDS	TOT_040000854	NC_025263.1	1936170	1936625	D	hypothetical protein	1936170..1936625	Theileria orientalis strain Shintoku	20716891
TOT_040000855	CDS	TOT_040000855	NC_025263.1	1937330	1938691	D	conserved hypothetical protein	1937330..1938691	Theileria orientalis strain Shintoku	20716892
TOT_040000857	CDS	TOT_040000857	NC_025263.1	1939232	1941631	D	conserved hypothetical protein	1939232..1941631	Theileria orientalis strain Shintoku	20716893
TOT_040000858	CDS	TOT_040000858	NC_025263.1	1941992	1942111	D	hypothetical protein	1941992..1942111	Theileria orientalis strain Shintoku	20716894
TOT_040000986	CDS	TOT_040000986	NC_025263.1	1942295	1944575	R	adenylosuccinate synthetase family protein; uncharacterized protein	complement(join(1942295..1942342,1942437..1942627,1942872..1943078,1943458..1943710,1943789..1944132,1944358..1944454,1944540..1944575))	Theileria orientalis strain Shintoku	20717006
TOT_040000860	CDS	TOT_040000860	NC_025263.1	1944854	1946442	D	zinc finger, PHD-type domain containing protein; uncharacterized protein	join(1944854..1944893,1945003..1945192,1945369..1945435,1945628..1945729,1945780..1945860,1946011..1946179,1946327..1946442)	Theileria orientalis strain Shintoku	20716895
TOT_040000861	CDS	TOT_040000861	NC_025263.1	1946552	1947843	D	splicing factor	join(1946552..1946610,1946714..1946844,1946900..1947843)	Theileria orientalis strain Shintoku	20716896
TOT_040000862	CDS	TOT_040000862	NC_025263.1	1947875	1948114	R	hypothetical protein	complement(join(1947875..1947945,1947997..1948114))	Theileria orientalis strain Shintoku	20716897
TOT_040000863	CDS	TOT_040000863	NC_025263.1	1948898	1958696	D	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	join(1948898..1951759,1951784..1952562,1954506..1956685,1956714..1956825,1956890..1956986,1957383..1958696)	Theileria orientalis strain Shintoku	20716898
TOT_040000864	CDS	TOT_040000864	NC_025263.1	1958858	1959047	D	hypothetical protein	join(1958858..1958906,1958929..1959047)	Theileria orientalis strain Shintoku	20716899
TOT_040000865	CDS	TOT_040000865	NC_025263.1	1959391	1960099	D	peroxiredoxin 1	join(1959391..1959837,1959953..1960099)	Theileria orientalis strain Shintoku	20716900
TOT_040000866	CDS	TOT_040000866	NC_025263.1	1960752	1961330	D	conserved hypothetical protein	1960752..1961330	Theileria orientalis strain Shintoku	20716901
TOT_040000987	CDS	TOT_040000987	NC_025263.1	1961741	1962268	R	conserved hypothetical protein	complement(join(1961741..1961859,1961941..1962004,1962251..1962268))	Theileria orientalis strain Shintoku	20717007
TOT_040000988	CDS	TOT_040000988	NC_025263.1	1962512	1963276	R	conserved hypothetical protein	complement(join(1962512..1962589,1962710..1962889,1962973..1963102,1963194..1963276))	Theileria orientalis strain Shintoku	20717008
TOT_040000869	CDS	TOT_040000869	NC_025263.1	1963929	1967247	R	FG-GAP repeat containing protein	complement(join(1963929..1964100,1964187..1964327,1964465..1964579,1964673..1964844,1965032..1965159,1965246..1965344,1965438..1965657,1965742..1965929,1966115..1966425,1966546..1966666,1966747..1966902,1967007..1967247))	Theileria orientalis strain Shintoku	20716902
TOT_040000870	CDS	TOT_040000870	NC_025263.1	1967497	1967646	R	hypothetical protein	complement(1967497..1967646)	Theileria orientalis strain Shintoku	20716903
TOT_040000871	CDS	TOT_040000871	NC_025263.1	1967948	1968516	R	conserved hypothetical protein	complement(join(1967948..1968079,1968134..1968188,1968219..1968352,1968433..1968516))	Theileria orientalis strain Shintoku	20716904
TOT_040000989	CDS	TOT_040000989	NC_025263.1	1968953	1970127	D	conserved hypothetical protein	join(1968953..1969268,1969368..1969486,1969656..1969958,1970023..1970127)	Theileria orientalis strain Shintoku	20717009
TOT_040000990	CDS	TOT_040000990	NC_025263.1	1970686	1972177	D	conserved hypothetical protein	join(1970686..1970772,1970867..1970960,1970997..1971067,1971154..1971195,1971261..1971322,1971442..1971611,1971749..1971882,1971959..1972024,1972088..1972177)	Theileria orientalis strain Shintoku	20717010
TOT_040000991	CDS	TOT_040000991	NC_025263.1	1972457	1973883	D	cell cycle regulator protein	join(1972457..1972537,1972882..1972961,1973136..1973233,1973291..1973418,1973630..1973697,1973784..1973883)	Theileria orientalis strain Shintoku	20717011
TOT_040000875	CDS	TOT_040000875	NC_025263.1	1974214	1974445	R	hypothetical protein	complement(join(1974214..1974282,1974362..1974445))	Theileria orientalis strain Shintoku	20716905
TOT_040000876	CDS	TOT_040000876	NC_025263.1	1976009	1980178	D	conserved hypothetical protein	1976009..1980178	Theileria orientalis strain Shintoku	20716906
TOT_040000877	CDS	TOT_040000877	NC_025263.1	1980222	1984681	R	protein of unknown function DUF529 repeat containing protein; uncharacterized protein	complement(join(1980222..1980356,1980466..1980618,1980749..1981512,1981579..1984681))	Theileria orientalis strain Shintoku	20716907
TOT_040000878	CDS	TOT_040000878	NC_025263.1	1985175	1987173	R	50S ribosomal protein L16	complement(join(1985175..1985631,1985745..1986013,1986157..1986335,1986531..1986840,1987102..1987173))	Theileria orientalis strain Shintoku	20716908
TOT_040000992	CDS	TOT_040000992	NC_025263.1	1987460	1987540	D	conserved hypothetical protein	1987460..1987540	Theileria orientalis strain Shintoku	20717012
TOT_040000880	CDS	TOT_040000880	NC_025263.1	1988431	1989948	D	phosphatidate cytidylyltransferase	1988431..1989948	Theileria orientalis strain Shintoku	20716909
TOT_040000881	CDS	TOT_040000881	NC_025263.1	1990277	1991070	D	ferredoxin	join(1990277..1990550,1990726..1990836,1990889..1991070)	Theileria orientalis strain Shintoku	20716910
TOT_040000882	CDS	TOT_040000882	NC_025263.1	1991183	1991941	R	40S ribosomal protein S15	complement(join(1991183..1991478,1991653..1991800,1991939..1991941))	Theileria orientalis strain Shintoku	20716911
TOT_040000883	CDS	TOT_040000883	NC_025263.1	1992371	1993067	D	surface protein	join(1992371..1992482,1992563..1992654,1992732..1993067)	Theileria orientalis strain Shintoku	20716912
TOT_040000885	CDS	TOT_040000885	NC_025263.1	1993313	1993785	D	conserved hypothetical protein	join(1993313..1993457,1993583..1993785)	Theileria orientalis strain Shintoku	20716913
TOT_040000886	CDS	TOT_040000886	NC_025263.1	1994252	1994851	D	conserved hypothetical protein	1994252..1994851	Theileria orientalis strain Shintoku	20716914
TOT_040000887	CDS	TOT_040000887	NC_025263.1	1995088	1997046	R	conserved hypothetical protein	complement(join(1995088..1995743,1995834..1996090,1996169..1996320,1996390..1996627,1996694..1997046))	Theileria orientalis strain Shintoku	20716915
TOT_040000888	CDS	TOT_040000888	NC_025263.1	1997235	1998843	R	conserved hypothetical protein	complement(join(1997235..1997500,1997533..1997741,1997807..1998843))	Theileria orientalis strain Shintoku	20716916
TOT_040000889	CDS	TOT_040000889	NC_025263.1	1999126	1999377	D	conserved hypothetical protein	1999126..1999377	Theileria orientalis strain Shintoku	20716917
TOT_040000890	CDS	TOT_040000890	NC_025263.1	2000063	2008793	D	cell division control protein	join(2000063..2000406,2000607..2001561,2001734..2002037,2002259..2003002,2003071..2003554,2004236..2004771,2004859..2008326,2008429..2008793)	Theileria orientalis strain Shintoku	20716918
TOT_040000891	CDS	TOT_040000891	NC_025263.1	2010040	2012520	R	conserved hypothetical protein	complement(2010040..2012520)	Theileria orientalis strain Shintoku	20716919
TOT_040000892	CDS	TOT_040000892	NC_025263.1	2012562	2012729	D	hypothetical protein	2012562..2012729	Theileria orientalis strain Shintoku	20716920
TOT_040000893	CDS	TOT_040000893	NC_025263.1	2012820	2013020	R	hypothetical protein	complement(2012820..2013020)	Theileria orientalis strain Shintoku	20716921
TOT_040000993	CDS	TOT_040000993	NC_025263.1	2013262	2016271	R	peptidase C1A, papain family protein; uncharacterized protein	complement(join(2013262..2014037,2014120..2014479,2014768..2016271))	Theileria orientalis strain Shintoku	20717013
TOT_040000895	CDS	TOT_040000895	NC_025263.1	2017337	2018909	D	hypothetical protein	join(2017337..2017411,2017534..2017644,2017663..2017977,2018125..2018432,2018547..2018641,2018701..2018909)	Theileria orientalis strain Shintoku	20716922
TOT_060000001	CDS	TOT_060000001	NW_009646192.1	1	1208	D	cytochrome c oxidase subunit 1	<1..1208	Theileria orientalis strain Shintoku	20717033
TOT_050000011	CDS	TOT_050000011	NW_009646193.1	557	925	R	Rps12	complement(557..925)	Theileria orientalis strain Shintoku	20717032
TOT_050000002	CDS	TOT_050000002	NW_009646193.1	3582	4271	R	50S ribosomal protein L16	complement(join(3582..3637,4010..4271))	Theileria orientalis strain Shintoku	20717028
TOT_050000001	CDS	TOT_050000001	NW_009646193.1	4965	5712	R	Rpl2	complement(join(4965..5164,5196..5712))	Theileria orientalis strain Shintoku	20717027
TOT_050000008	CDS	TOT_050000008	NW_009646193.1	15441	16854	R	RpoC2-N-terminal	complement(join(15441..15625,16151..16333,16719..16854))	Theileria orientalis strain Shintoku	20717029
TOT_050000009	CDS	TOT_050000009	NW_009646193.1	17497	20829	R	DNA-directed RNA polymerase	complement(join(17497..18173,18366..18591,19207..20829))	Theileria orientalis strain Shintoku	20717030
TOT_050000010	CDS	TOT_050000010	NW_009646193.1	23520	24008	R	ATPase associated with various cellular activities	complement(23520..24008)	Theileria orientalis strain Shintoku	20717031
TOT_010000001	mRNA	TOT_010000001	NC_025260.1	198	368	R	TOT_010000001	complement(<198..>368)	Theileria orientalis strain Shintoku	20712976
TOT_010000002	mRNA	TOT_010000002	NC_025260.1	505	1463	R	TOT_010000002	complement(join(<505..678,1023..>1463))	Theileria orientalis strain Shintoku	20712977
TOT_010000003	mRNA	TOT_010000003	NC_025260.1	1805	10431	R	TOT_010000003	complement(join(<1805..4350,4491..>10431))	Theileria orientalis strain Shintoku	20712978
TOT_010000004	mRNA	TOT_010000004	NC_025260.1	13629	18194	R	TOT_010000004	complement(<13629..>18194)	Theileria orientalis strain Shintoku	20712979
TOT_010000005	mRNA	TOT_010000005	NC_025260.1	19482	21044	D	TOT_010000005	<19482..>21044	Theileria orientalis strain Shintoku	20712980
TOT_010000006	mRNA	TOT_010000006	NC_025260.1	21857	26371	R	TOT_010000006	complement(<21857..>26371)	Theileria orientalis strain Shintoku	20712981
TOT_010000007	mRNA	TOT_010000007	NC_025260.1	26724	28563	R	TOT_010000007	complement(join(<26724..26832,26925..27046,27279..27415,27712..27809,28466..>28563))	Theileria orientalis strain Shintoku	20712982
TOT_010000008	mRNA	TOT_010000008	NC_025260.1	29844	34412	D	TOT_010000008	<29844..>34412	Theileria orientalis strain Shintoku	20712983
TOT_010000009	mRNA	TOT_010000009	NC_025260.1	34817	40431	D	TOT_010000009	join(<34817..36108,36212..38472,38570..>40431)	Theileria orientalis strain Shintoku	20712984
TOT_010001198	mRNA	TOT_010001198	NC_025260.1	41144	41802	R	TOT_010001198	complement(join(<41144..41281,41312..41499,41532..41614,41669..>41802))	Theileria orientalis strain Shintoku	20713997
TOT_010000011	mRNA	TOT_010000011	NC_025260.1	41990	43062	R	TOT_010000011	complement(join(<41990..42094,42124..42219,42250..42352,42383..42450,42482..42586,42616..42864,42898..>43062))	Theileria orientalis strain Shintoku	20712985
TOT_010000012	mRNA	TOT_010000012	NC_025260.1	43288	47715	R	TOT_010000012	complement(join(<43288..45590,45629..45784,45816..46703,46758..>47715))	Theileria orientalis strain Shintoku	20712986
TOT_010000013	mRNA	TOT_010000013	NC_025260.1	48361	50837	D	TOT_010000013	join(<48361..48851,48882..49022,49056..49748,49778..49883,49913..50187,50224..50378,50445..50592,50648..>50837)	Theileria orientalis strain Shintoku	20712987
TOT_010000014	mRNA	TOT_010000014	NC_025260.1	51162	53982	R	TOT_010000014	complement(join(<51162..51457,51744..>53982))	Theileria orientalis strain Shintoku	20712988
TOT_010000015	mRNA	TOT_010000015	NC_025260.1	54970	57886	D	TOT_010000015	join(<54970..55122,55152..55278,55314..55419,55488..55806,55852..56417,56473..56665,56696..56767,56800..56998,57032..57810,57842..>57886)	Theileria orientalis strain Shintoku	20712989
TOT_010000016	mRNA	TOT_010000016	NC_025260.1	58100	58548	D	TOT_010000016	join(<58100..58279,58342..>58548)	Theileria orientalis strain Shintoku	20712990
TOT_010000017	mRNA	TOT_010000017	NC_025260.1	58806	59888	D	TOT_010000017	<58806..>59888	Theileria orientalis strain Shintoku	20712991
TOT_010000018	mRNA	TOT_010000018	NC_025260.1	60077	61520	D	TOT_010000018	join(<60077..60529,60570..>61520)	Theileria orientalis strain Shintoku	20712992
TOT_010000019	mRNA	TOT_010000019	NC_025260.1	62015	73155	R	TOT_010000019	complement(join(<62015..62201,62438..67231,67524..67893,68160..68269,68324..70242,70789..71191,71344..71422,71463..71647,71740..71968,72045..>73155))	Theileria orientalis strain Shintoku	20712993
TOT_010000020	mRNA	TOT_010000020	NC_025260.1	74224	75598	R	TOT_010000020	complement(join(<74224..74361,74394..74882,74914..74989,75163..75404,75434..>75598))	Theileria orientalis strain Shintoku	20712994
TOT_010000021	mRNA	TOT_010000021	NC_025260.1	75914	78226	D	TOT_010000021	join(<75914..77360,77403..77638,77714..>78226)	Theileria orientalis strain Shintoku	20712995
TOT_010001199	mRNA	TOT_010001199	NC_025260.1	78231	78737	R	TOT_010001199	complement(<78231..>78737)	Theileria orientalis strain Shintoku	20713998
TOT_010000023	mRNA	TOT_010000023	NC_025260.1	79191	80500	D	TOT_010000023	join(<79191..79270,79304..79407,79439..79618,79648..80162,80194..80311,80364..>80500)	Theileria orientalis strain Shintoku	20712996
TOT_010000024	mRNA	TOT_010000024	NC_025260.1	80640	81704	D	TOT_010000024	<80640..>81704	Theileria orientalis strain Shintoku	20712997
TOT_010000025	mRNA	TOT_010000025	NC_025260.1	81784	82995	D	TOT_010000025	join(<81784..82081,82116..82195,82228..82449,82481..82617,82649..82725,82757..>82995)	Theileria orientalis strain Shintoku	20712998
TOT_010001200	mRNA	TOT_010001200	NC_025260.1	83260	85364	D	TOT_010001200	join(<83260..85172,85256..>85364)	Theileria orientalis strain Shintoku	20713999
TOT_010001201	mRNA	TOT_010001201	NC_025260.1	85353	87110	R	TOT_010001201	complement(join(<85353..85547,85614..86164,86210..>87110))	Theileria orientalis strain Shintoku	20714000
TOT_010001202	mRNA	TOT_010001202	NC_025260.1	87625	90311	R	TOT_010001202	complement(join(<87625..87906,87949..89985,90021..>90311))	Theileria orientalis strain Shintoku	20714001
TOT_010000029	mRNA	TOT_010000029	NC_025260.1	90453	91861	R	TOT_010000029	complement(join(<90453..90732,90775..90941,91148..>91861))	Theileria orientalis strain Shintoku	20712999
TOT_010000030	mRNA	TOT_010000030	NC_025260.1	92289	94307	D	TOT_010000030	join(<92289..92351,92551..93098,93128..93288,93319..93422,93442..93569,93600..93720,93763..93882,93917..94029,94130..>94307)	Theileria orientalis strain Shintoku	20713000
TOT_010001203	mRNA	TOT_010001203	NC_025260.1	95014	96648	R	TOT_010001203	complement(join(<95014..95280,95313..95426,95459..95695,95731..>96648))	Theileria orientalis strain Shintoku	20714002
TOT_010000032	mRNA	TOT_010000032	NC_025260.1	97214	98557	D	TOT_010000032	<97214..>98557	Theileria orientalis strain Shintoku	20713001
TOT_010000033	mRNA	TOT_010000033	NC_025260.1	98700	99674	R	TOT_010000033	complement(join(<98700..99032,99064..99179,99211..99405,99440..>99674))	Theileria orientalis strain Shintoku	20713002
TOT_010000034	mRNA	TOT_010000034	NC_025260.1	99936	101096	R	TOT_010000034	complement(join(<99936..100055,100095..100415,100449..>101096))	Theileria orientalis strain Shintoku	20713003
TOT_010000035	mRNA	TOT_010000035	NC_025260.1	101456	102847	D	TOT_010000035	join(<101456..101531,101564..101677,101710..101836,101877..101964,102009..102086,102247..102382,102612..>102847)	Theileria orientalis strain Shintoku	20713004
TOT_010000036	mRNA	TOT_010000036	NC_025260.1	102861	104494	R	TOT_010000036	complement(join(<102861..103963,103995..104327,104368..>104494))	Theileria orientalis strain Shintoku	20713005
TOT_010000037	mRNA	TOT_010000037	NC_025260.1	105072	106535	D	TOT_010000037	<105072..>106535	Theileria orientalis strain Shintoku	20713006
TOT_010000038	mRNA	TOT_010000038	NC_025260.1	106589	107456	D	TOT_010000038	join(<106589..106850,106886..107141,107180..>107456)	Theileria orientalis strain Shintoku	20713007
TOT_010000039	mRNA	TOT_010000039	NC_025260.1	108065	109525	D	TOT_010000039	<108065..>109525	Theileria orientalis strain Shintoku	20713008
TOT_010000040	mRNA	TOT_010000040	NC_025260.1	109579	110446	D	TOT_010000040	join(<109579..109840,109876..110131,110170..>110446)	Theileria orientalis strain Shintoku	20713009
TOT_010000041	mRNA	TOT_010000041	NC_025260.1	111079	112548	D	TOT_010000041	<111079..>112548	Theileria orientalis strain Shintoku	20713010
TOT_010000042	mRNA	TOT_010000042	NC_025260.1	112610	113009	R	TOT_010000042	complement(join(<112610..112873,112902..>113009))	Theileria orientalis strain Shintoku	20713011
TOT_010000043	mRNA	TOT_010000043	NC_025260.1	113547	114147	D	TOT_010000043	join(<113547..113611,113668..113992,114025..>114147)	Theileria orientalis strain Shintoku	20713012
TOT_010000044	mRNA	TOT_010000044	NC_025260.1	115082	116213	R	TOT_010000044	complement(join(<115082..115216,115246..115337,115543..115866,115898..116093,116130..>116213))	Theileria orientalis strain Shintoku	20713013
TOT_010000045	mRNA	TOT_010000045	NC_025260.1	116854	118506	D	TOT_010000045	join(<116854..116875,116920..117099,117132..117256,117290..117395,117428..117480,117512..117554,117589..117607,117639..117709,117781..117862,117900..118003,118036..118246,118278..>118506)	Theileria orientalis strain Shintoku	20713014
TOT_010000046	mRNA	TOT_010000046	NC_025260.1	118761	120870	R	TOT_010000046	complement(join(<118761..120689,120853..>120870))	Theileria orientalis strain Shintoku	20713015
TOT_010000047	mRNA	TOT_010000047	NC_025260.1	121026	122354	D	TOT_010000047	join(<121026..121082,121114..121378,121411..121772,121803..121892,121932..122162,122193..>122354)	Theileria orientalis strain Shintoku	20713016
TOT_010000048	mRNA	TOT_010000048	NC_025260.1	122591	124324	D	TOT_010000048	<122591..>124324	Theileria orientalis strain Shintoku	20713017
TOT_010001204	mRNA	TOT_010001204	NC_025260.1	124567	125028	R	TOT_010001204	complement(<124567..>125028)	Theileria orientalis strain Shintoku	20714003
TOT_010000049	mRNA	TOT_010000049	NC_025260.1	125166	127253	R	TOT_010000049	complement(join(<125166..125232,125264..125395,125426..125530,125561..125899,125939..126190,126222..126277,126308..126646,126680..126745,126779..126855,126893..127001,127038..>127253))	Theileria orientalis strain Shintoku	20713018
TOT_010000050	mRNA	TOT_010000050	NC_025260.1	127410	129156	R	TOT_010000050	complement(join(<127410..127529,127561..127798,127829..128010,128052..128240,128271..128356,128388..128502,128534..128633,128665..128826,128865..128922,128967..>129156))	Theileria orientalis strain Shintoku	20713019
TOT_010000051	mRNA	TOT_010000051	NC_025260.1	130023	130538	D	TOT_010000051	<130023..>130538	Theileria orientalis strain Shintoku	20713020
TOT_010000052	mRNA	TOT_010000052	NC_025260.1	130670	131495	R	TOT_010000052	complement(join(<130670..130734,130767..130851,130901..131017,131072..131147,131180..131305,131344..>131495))	Theileria orientalis strain Shintoku	20713021
TOT_010000053	mRNA	TOT_010000053	NC_025260.1	131660	132551	D	TOT_010000053	join(<131660..132264,132300..132420,132450..>132551)	Theileria orientalis strain Shintoku	20713022
TOT_010000054	mRNA	TOT_010000054	NC_025260.1	133040	136656	R	TOT_010000054	complement(join(<133040..134197,134497..136172,136200..136337,136389..>136656))	Theileria orientalis strain Shintoku	20713023
TOT_010000055	mRNA	TOT_010000055	NC_025260.1	136856	138501	D	TOT_010000055	join(<136856..137058,137091..137192,137224..137311,137345..137446,137477..137679,137709..137946,138043..>138501)	Theileria orientalis strain Shintoku	20713024
TOT_010000056	mRNA	TOT_010000056	NC_025260.1	138525	139012	R	TOT_010000056	complement(join(<138525..138659,138692..>139012))	Theileria orientalis strain Shintoku	20713025
TOT_010000057	mRNA	TOT_010000057	NC_025260.1	139223	140091	D	TOT_010000057	join(<139223..139424,139462..139615,139645..139912,139945..>140091)	Theileria orientalis strain Shintoku	20713026
TOT_010000058	mRNA	TOT_010000058	NC_025260.1	140137	140679	D	TOT_010000058	join(<140137..140250,140281..>140679)	Theileria orientalis strain Shintoku	20713027
TOT_010000059	mRNA	TOT_010000059	NC_025260.1	140911	142060	D	TOT_010000059	join(<140911..141013,141044..141170,141210..141535,141565..141697,141733..141886,141917..>142060)	Theileria orientalis strain Shintoku	20713028
TOT_010001205	mRNA	TOT_010001205	NC_025260.1	142351	142530	R	TOT_010001205	complement(<142351..>142530)	Theileria orientalis strain Shintoku	20714004
TOT_010000061	mRNA	TOT_010000061	NC_025260.1	144731	145082	D	TOT_010000061	join(<144731..144842,144886..>145082)	Theileria orientalis strain Shintoku	20713029
TOT_010000062	mRNA	TOT_010000062	NC_025260.1	145397	145678	D	TOT_010000062	<145397..>145678	Theileria orientalis strain Shintoku	20713030
TOT_010000063	mRNA	TOT_010000063	NC_025260.1	147013	149361	D	TOT_010000063	join(<147013..148909,149057..>149361)	Theileria orientalis strain Shintoku	20713031
TOT_010000064	mRNA	TOT_010000064	NC_025260.1	149362	150269	D	TOT_010000064	join(<149362..149389,149497..149603,149845..150026,150116..>150269)	Theileria orientalis strain Shintoku	20713032
TOT_010000065	mRNA	TOT_010000065	NC_025260.1	151238	153764	D	TOT_010000065	join(<151238..151411,151455..151569,151606..151730,151775..151925,151957..152142,152174..152477,152509..152643,152675..152742,152772..153056,153181..153335,153366..>153764)	Theileria orientalis strain Shintoku	20713033
TOT_010000066	mRNA	TOT_010000066	NC_025260.1	153850	154147	R	TOT_010000066	complement(join(<153850..153914,153945..154096,154131..>154147))	Theileria orientalis strain Shintoku	20713034
TOT_010000067	mRNA	TOT_010000067	NC_025260.1	155317	158203	D	TOT_010000067	join(<155317..156805,156919..157870,158035..>158203)	Theileria orientalis strain Shintoku	20713035
TOT_010001206	mRNA	TOT_010001206	NC_025260.1	158713	158985	R	TOT_010001206	complement(<158713..>158985)	Theileria orientalis strain Shintoku	20714005
TOT_010000069	mRNA	TOT_010000069	NC_025260.1	159236	161941	D	TOT_010000069	<159236..>161941	Theileria orientalis strain Shintoku	20713036
TOT_010000070	mRNA	TOT_010000070	NC_025260.1	162077	162733	D	TOT_010000070	join(<162077..162244,162283..162388,162453..>162733)	Theileria orientalis strain Shintoku	20713037
TOT_010000071	mRNA	TOT_010000071	NC_025260.1	162777	165197	R	TOT_010000071	complement(join(<162777..163477,163653..163944,163988..164050,164093..164280,164321..164422,164464..164541,164576..>165197))	Theileria orientalis strain Shintoku	20713038
TOT_010000072	mRNA	TOT_010000072	NC_025260.1	165399	166467	D	TOT_010000072	join(<165399..165672,165758..165898,165929..166078,166271..>166467)	Theileria orientalis strain Shintoku	20713039
TOT_010001207	mRNA	TOT_010001207	NC_025260.1	166865	172628	R	TOT_010001207	complement(join(<166865..167164,167333..167442,167537..168815,168969..169442,169611..169960,170153..170765,170826..172460,172497..>172628))	Theileria orientalis strain Shintoku	20714006
TOT_010000074	mRNA	TOT_010000074	NC_025260.1	173127	173424	D	TOT_010000074	join(<173127..173204,173356..>173424)	Theileria orientalis strain Shintoku	20713040
TOT_010000075	mRNA	TOT_010000075	NC_025260.1	173870	174267	D	TOT_010000075	join(<173870..173921,173959..174045,174080..>174267)	Theileria orientalis strain Shintoku	20713041
TOT_010000076	mRNA	TOT_010000076	NC_025260.1	174364	175455	R	TOT_010000076	complement(<174364..>175455)	Theileria orientalis strain Shintoku	20713042
TOT_010000077	mRNA	TOT_010000077	NC_025260.1	176010	176524	D	TOT_010000077	join(<176010..176256,176288..176407,176439..>176524)	Theileria orientalis strain Shintoku	20713043
TOT_010000078	mRNA	TOT_010000078	NC_025260.1	176572	180052	R	TOT_010000078	complement(join(<176572..176718,176748..176891,176923..177405,177469..177550,177725..178953,179104..180016,180048..>180052))	Theileria orientalis strain Shintoku	20713044
TOT_010000079	mRNA	TOT_010000079	NC_025260.1	181105	182008	D	TOT_010000079	join(<181105..181198,181241..181302,181337..181411,181469..181556,181589..181674,181733..>182008)	Theileria orientalis strain Shintoku	20713045
TOT_010001208	mRNA	TOT_010001208	NC_025260.1	182097	183203	R	TOT_010001208	complement(join(<182097..182221,182320..182475,182542..182850,182921..>183203))	Theileria orientalis strain Shintoku	20714007
TOT_010000081	mRNA	TOT_010000081	NC_025260.1	183575	186446	D	TOT_010000081	join(<183575..184446,184516..184693,184788..184888,184921..186061,186245..186438,186443..>186446)	Theileria orientalis strain Shintoku	20713046
TOT_010000082	mRNA	TOT_010000082	NC_025260.1	186533	189097	R	TOT_010000082	complement(join(<186533..186631,186659..>189097))	Theileria orientalis strain Shintoku	20713047
TOT_010000083	mRNA	TOT_010000083	NC_025260.1	189350	190993	D	TOT_010000083	join(<189350..189391,189427..189644,189913..190322,190362..190525,190558..190764,190802..>190993)	Theileria orientalis strain Shintoku	20713048
TOT_010000084	mRNA	TOT_010000084	NC_025260.1	191167	199749	R	TOT_010000084	complement(join(<191167..191651,191735..192205,192402..193040,193227..193827,193928..196812,196881..>199749))	Theileria orientalis strain Shintoku	20713049
TOT_010000085	mRNA	TOT_010000085	NC_025260.1	200300	201109	R	TOT_010000085	complement(<200300..>201109)	Theileria orientalis strain Shintoku	20713050
TOT_010000086	mRNA	TOT_010000086	NC_025260.1	201558	202016	D	TOT_010000086	<201558..>202016	Theileria orientalis strain Shintoku	20713051
TOT_010000087	mRNA	TOT_010000087	NC_025260.1	202156	203265	R	TOT_010000087	complement(<202156..>203265)	Theileria orientalis strain Shintoku	20713052
TOT_010000088	mRNA	TOT_010000088	NC_025260.1	203524	204437	R	TOT_010000088	complement(join(<203524..203700,203799..203852,203884..204194,204226..204283,204318..>204437))	Theileria orientalis strain Shintoku	20713053
TOT_010000089	mRNA	TOT_010000089	NC_025260.1	204524	205433	R	TOT_010000089	complement(join(<204524..204632,204660..204747,204859..204903,204935..204967,205000..205044,205074..205136,205243..205306,205338..>205433))	Theileria orientalis strain Shintoku	20713054
TOT_010001209	mRNA	TOT_010001209	NC_025260.1	205488	207584	R	TOT_010001209	complement(<205488..>207584)	Theileria orientalis strain Shintoku	20714008
TOT_010000091	mRNA	TOT_010000091	NC_025260.1	207944	212523	R	TOT_010000091	complement(join(<207944..208335,208765..209127,209616..209729,209990..210244,210277..210583,210773..210841,210896..211090,211165..211529,211648..211881,211964..212119,212235..>212523))	Theileria orientalis strain Shintoku	20713055
TOT_010000092	mRNA	TOT_010000092	NC_025260.1	213157	215307	D	TOT_010000092	<213157..>215307	Theileria orientalis strain Shintoku	20713056
TOT_010000093	mRNA	TOT_010000093	NC_025260.1	215751	216893	D	TOT_010000093	<215751..>216893	Theileria orientalis strain Shintoku	20713057
TOT_010000094	mRNA	TOT_010000094	NC_025260.1	217043	217741	D	TOT_010000094	join(<217043..217153,217224..217498,217594..>217741)	Theileria orientalis strain Shintoku	20713058
TOT_010000095	mRNA	TOT_010000095	NC_025260.1	218055	220462	D	TOT_010000095	join(<218055..218307,218387..218833,218911..219647,219728..219909,219946..220033,220097..220284,220315..>220462)	Theileria orientalis strain Shintoku	20713059
TOT_010000096	mRNA	TOT_010000096	NC_025260.1	220766	221927	D	TOT_010000096	join(<220766..221027,221073..221234,221333..221485,221550..221642,221721..221786,221842..>221927)	Theileria orientalis strain Shintoku	20713060
TOT_010000097	mRNA	TOT_010000097	NC_025260.1	222163	223259	R	TOT_010000097	complement(join(<222163..222243,222305..222361,222452..222577,222628..222765,222863..222990,223043..223094,223182..>223259))	Theileria orientalis strain Shintoku	20713061
TOT_010000098	mRNA	TOT_010000098	NC_025260.1	223541	225474	R	TOT_010000098	complement(join(<223541..224512,224561..224645,224747..225219,225289..>225474))	Theileria orientalis strain Shintoku	20713062
TOT_010000099	mRNA	TOT_010000099	NC_025260.1	225909	227476	D	TOT_010000099	join(<225909..226034,226092..226213,226276..226715,226747..226915,226955..227074,227106..227178,227255..227360,227427..>227476)	Theileria orientalis strain Shintoku	20713063
TOT_010000100	mRNA	TOT_010000100	NC_025260.1	227901	229024	R	TOT_010000100	complement(join(<227901..228065,228134..228234,228298..228418,228484..228564,228595..228684,228718..228808,228849..228909,228943..>229024))	Theileria orientalis strain Shintoku	20713064
TOT_010000101	mRNA	TOT_010000101	NC_025260.1	229156	229848	R	TOT_010000101	complement(join(<229156..229365,229437..229511,229575..229630,229746..>229848))	Theileria orientalis strain Shintoku	20713065
TOT_010000102	mRNA	TOT_010000102	NC_025260.1	230081	231409	R	TOT_010000102	complement(join(<230081..230149,230202..230480,230511..230600,230630..230748,230914..231050,231083..231165,231197..231268,231305..>231409))	Theileria orientalis strain Shintoku	20713066
TOT_010000103	mRNA	TOT_010000103	NC_025260.1	231864	234744	D	TOT_010000103	join(<231864..231900,231953..233769,233944..>234744)	Theileria orientalis strain Shintoku	20713067
TOT_010000104	mRNA	TOT_010000104	NC_025260.1	235134	239666	R	TOT_010000104	complement(<235134..>239666)	Theileria orientalis strain Shintoku	20713068
TOT_010000105	mRNA	TOT_010000105	NC_025260.1	240999	246085	R	TOT_010000105	complement(join(<240999..241357,241493..243203,243966..244721,244758..245194,245613..245762,245797..245869,245936..>246085))	Theileria orientalis strain Shintoku	20713069
TOT_010000106	mRNA	TOT_010000106	NC_025260.1	246248	247640	D	TOT_010000106	join(<246248..246571,246603..246766,246798..246966,247011..247106,247149..247262,247292..247480,247522..247565,247598..>247640)	Theileria orientalis strain Shintoku	20713070
TOT_010000107	mRNA	TOT_010000107	NC_025260.1	247637	247987	R	TOT_010000107	complement(<247637..>247987)	Theileria orientalis strain Shintoku	20713071
TOT_010000108	mRNA	TOT_010000108	NC_025260.1	248343	249981	D	TOT_010000108	join(<248343..248535,248576..249093,249161..249320,249399..249463,249498..249555,249587..249641,249671..249749,249877..>249981)	Theileria orientalis strain Shintoku	20713072
TOT_010000109	mRNA	TOT_010000109	NC_025260.1	250218	253477	R	TOT_010000109	complement(join(<250218..250286,250399..250538,250612..251386,251462..253011,253057..>253477))	Theileria orientalis strain Shintoku	20713073
TOT_010000110	mRNA	TOT_010000110	NC_025260.1	253657	255187	R	TOT_010000110	complement(join(<253657..253758,253789..253855,253888..253928,253959..254060,254090..254284,254315..254382,254422..254580,254707..254922,254959..>255187))	Theileria orientalis strain Shintoku	20713074
TOT_010001210	mRNA	TOT_010001210	NC_025260.1	255914	258534	D	TOT_010001210	join(<255914..255980,256020..256095,256129..256243,256275..256509,256569..256750,256780..256927,257000..257133,257227..257436,257628..258299,258331..>258534)	Theileria orientalis strain Shintoku	20714009
TOT_010000112	mRNA	TOT_010000112	NC_025260.1	259502	263219	D	TOT_010000112	join(<259502..259917,259947..260022,260058..260102,260200..260310,260340..260450,260542..260617,260686..260810,260849..261481,261496..261765,261803..262120,262162..262314,262351..262530,262854..262924,263022..263113,263158..>263219)	Theileria orientalis strain Shintoku	20713075
TOT_010000113	mRNA	TOT_010000113	NC_025260.1	263416	264799	R	TOT_010000113	complement(join(<263416..263497,263823..264244,264276..264427,264457..>264799))	Theileria orientalis strain Shintoku	20713076
TOT_010000114	mRNA	TOT_010000114	NC_025260.1	266195	268299	R	TOT_010000114	complement(join(<266195..266329,266364..266421,266453..266562,266622..266762,266797..266912,266946..267048,267079..267447,267475..>268299))	Theileria orientalis strain Shintoku	20713077
TOT_010000115	mRNA	TOT_010000115	NC_025260.1	268392	270863	D	TOT_010000115	join(<268392..268916,268947..269202,269233..269432,269462..269675,269725..269887,269919..270097,270162..270355,270473..270658,270732..>270863)	Theileria orientalis strain Shintoku	20713078
TOT_010000116	mRNA	TOT_010000116	NC_025260.1	270960	272728	R	TOT_010000116	complement(join(<270960..271370,271414..272315,272347..>272728))	Theileria orientalis strain Shintoku	20713079
TOT_010000117	mRNA	TOT_010000117	NC_025260.1	273290	275278	D	TOT_010000117	join(<273290..273468,273504..273742,273772..273839,273869..274003,274061..>275278)	Theileria orientalis strain Shintoku	20713080
TOT_010000118	mRNA	TOT_010000118	NC_025260.1	275873	277985	R	TOT_010000118	complement(join(<275873..276066,276309..276433,276474..276652,276779..277237,277267..277641,277672..277827,277884..>277985))	Theileria orientalis strain Shintoku	20713081
TOT_010000119	mRNA	TOT_010000119	NC_025260.1	278267	281441	D	TOT_010000119	join(<278267..278455,278525..278668,278732..278803,278834..278959,278992..279135,279167..279313,279346..279616,279647..279694,279726..280178,280209..281218,281284..281352,281388..>281441)	Theileria orientalis strain Shintoku	20713082
TOT_010000120	mRNA	TOT_010000120	NC_025260.1	281643	282833	R	TOT_010000120	complement(<281643..>282833)	Theileria orientalis strain Shintoku	20713083
TOT_010001211	mRNA	TOT_010001211	NC_025260.1	283418	285035	D	TOT_010001211	join(<283418..283636,283671..283721,283782..284145,284179..284296,284341..284393,284433..284914,284946..>285035)	Theileria orientalis strain Shintoku	20714010
TOT_010000122	mRNA	TOT_010000122	NC_025260.1	285032	285610	R	TOT_010000122	complement(<285032..>285610)	Theileria orientalis strain Shintoku	20713084
TOT_010000123	mRNA	TOT_010000123	NC_025260.1	285883	286942	D	TOT_010000123	join(<285883..286092,286128..286222,286255..286343,286373..286475,286507..286825,286856..>286942)	Theileria orientalis strain Shintoku	20713085
TOT_010000124	mRNA	TOT_010000124	NC_025260.1	287125	287704	R	TOT_010000124	complement(join(<287125..287511,287555..>287704))	Theileria orientalis strain Shintoku	20713086
TOT_010000125	mRNA	TOT_010000125	NC_025260.1	288164	288640	R	TOT_010000125	complement(join(<288164..288313,288344..>288640))	Theileria orientalis strain Shintoku	20713087
TOT_010000126	mRNA	TOT_010000126	NC_025260.1	288905	289850	D	TOT_010000126	join(<288905..289046,289083..289768,289800..>289850)	Theileria orientalis strain Shintoku	20713088
TOT_010000127	mRNA	TOT_010000127	NC_025260.1	290190	291369	D	TOT_010000127	join(<290190..290276,290307..290477,290557..>291369)	Theileria orientalis strain Shintoku	20713089
TOT_010000128	mRNA	TOT_010000128	NC_025260.1	291554	293112	D	TOT_010000128	join(<291554..291666,291697..291787,291822..291967,292009..292136,292167..292209,292239..292455,292558..292641,292721..293014,293050..>293112)	Theileria orientalis strain Shintoku	20713090
TOT_010000129	mRNA	TOT_010000129	NC_025260.1	293301	295691	R	TOT_010000129	complement(<293301..>295691)	Theileria orientalis strain Shintoku	20713091
TOT_010000130	mRNA	TOT_010000130	NC_025260.1	296078	299777	R	TOT_010000130	complement(join(<296078..299657,299713..>299777))	Theileria orientalis strain Shintoku	20713092
TOT_010000131	mRNA	TOT_010000131	NC_025260.1	299901	302994	R	TOT_010000131	complement(join(<299901..300097,300197..301805,301913..302058,302089..302224,302290..>302994))	Theileria orientalis strain Shintoku	20713093
TOT_010001212	mRNA	TOT_010001212	NC_025260.1	303129	305316	D	TOT_010001212	join(<303129..303439,303563..304016,304050..304256,304326..304438,304469..304609,304642..304799,304869..304991,305024..305076,305107..305253,305287..>305316)	Theileria orientalis strain Shintoku	20714011
TOT_010001183	mRNA	TOT_010001183	NC_025260.1	306340	308242	D	TOT_010001183	join(<306340..306685,306717..306886,306916..307047,307077..307280,307310..307549,307584..307833,307895..307967,308002..>308242)	Theileria orientalis strain Shintoku	20713984
TOT_010000133	mRNA	TOT_010000133	NC_025260.1	308334	310259	R	TOT_010000133	complement(join(<308334..308468,308508..308568,308654..308751,308819..308934,309128..309260,309291..>310259))	Theileria orientalis strain Shintoku	20713094
TOT_010000134	mRNA	TOT_010000134	NC_025260.1	310289	311613	D	TOT_010000134	join(<310289..310455,310494..310579,310610..310735,310771..310920,310950..311038,311068..311124,311155..311238,311270..311344,311377..311447,311478..>311613)	Theileria orientalis strain Shintoku	20713095
TOT_010000135	mRNA	TOT_010000135	NC_025260.1	311971	314070	R	TOT_010000135	complement(<311971..>314070)	Theileria orientalis strain Shintoku	20713096
TOT_010000136	mRNA	TOT_010000136	NC_025260.1	314772	315187	R	TOT_010000136	complement(join(<314772..314834,314869..315014,315052..>315187))	Theileria orientalis strain Shintoku	20713097
TOT_010000137	mRNA	TOT_010000137	NC_025260.1	315351	317777	D	TOT_010000137	join(<315351..315752,315783..315874,315904..316084,316180..316260,316352..316420,316452..316659,316784..317151,317228..317437,317691..>317777)	Theileria orientalis strain Shintoku	20713098
TOT_010000138	mRNA	TOT_010000138	NC_025260.1	317975	320347	R	TOT_010000138	complement(join(<317975..320002,320101..320241,320294..>320347))	Theileria orientalis strain Shintoku	20713099
TOT_010000139	mRNA	TOT_010000139	NC_025260.1	320612	323614	R	TOT_010000139	complement(join(<320612..321071,321195..322140,322213..323376,323407..>323614))	Theileria orientalis strain Shintoku	20713100
TOT_010001213	mRNA	TOT_010001213	NC_025260.1	324168	324614	D	TOT_010001213	<324168..>324614	Theileria orientalis strain Shintoku	20714012
TOT_010000141	mRNA	TOT_010000141	NC_025260.1	325214	325807	R	TOT_010000141	complement(<325214..>325807)	Theileria orientalis strain Shintoku	20713101
TOT_010000142	mRNA	TOT_010000142	NC_025260.1	326897	329831	R	TOT_010000142	complement(join(<326897..327250,327282..328116,328221..328665,328710..329189,329242..329337,329369..329572,329690..>329831))	Theileria orientalis strain Shintoku	20713102
TOT_010001214	mRNA	TOT_010001214	NC_025260.1	330138	331349	R	TOT_010001214	complement(join(<330138..330890,331008..331121,331164..>331349))	Theileria orientalis strain Shintoku	20714013
TOT_010001215	mRNA	TOT_010001215	NC_025260.1	332044	335586	D	TOT_010001215	join(<332044..333577,333809..>335586)	Theileria orientalis strain Shintoku	20714014
TOT_010000145	mRNA	TOT_010000145	NC_025260.1	335665	337295	R	TOT_010000145	complement(join(<335665..335888,336033..336101,336254..336468,336484..336580,336612..336902,337010..>337295))	Theileria orientalis strain Shintoku	20713103
TOT_010000146	mRNA	TOT_010000146	NC_025260.1	337877	338468	D	TOT_010000146	join(<337877..338005,338153..338194,338277..>338468)	Theileria orientalis strain Shintoku	20713104
TOT_010000147	mRNA	TOT_010000147	NC_025260.1	338629	340809	R	TOT_010000147	complement(<338629..>340809)	Theileria orientalis strain Shintoku	20713105
TOT_010000148	mRNA	TOT_010000148	NC_025260.1	341276	343215	D	TOT_010000148	join(<341276..341279,341345..342646,342655..343118,343153..>343215)	Theileria orientalis strain Shintoku	20713106
TOT_010000149	mRNA	TOT_010000149	NC_025260.1	344010	344621	D	TOT_010000149	join(<344010..344186,344278..344344,344449..>344621)	Theileria orientalis strain Shintoku	20713107
TOT_010000150	mRNA	TOT_010000150	NC_025260.1	344788	349365	R	TOT_010000150	complement(join(<344788..344957,345103..345211,345316..345513,345645..345929,346102..346935,347105..348011,348016..348499,348557..348712,348748..348953,349268..>349365))	Theileria orientalis strain Shintoku	20713108
TOT_010000151	mRNA	TOT_010000151	NC_025260.1	349796	351707	D	TOT_010000151	join(<349796..349981,350022..350741,350787..350871,350938..351138,351193..>351707)	Theileria orientalis strain Shintoku	20713109
TOT_010000152	mRNA	TOT_010000152	NC_025260.1	352152	355238	R	TOT_010000152	complement(join(<352152..352286,352439..352544,352640..353377,353628..354001,354064..354183,354329..354635,354713..354852,354947..355084,355179..>355238))	Theileria orientalis strain Shintoku	20713110
TOT_010000153	mRNA	TOT_010000153	NC_025260.1	355433	358105	R	TOT_010000153	complement(join(<355433..355714,355886..356031,356083..356114,356187..356317,356405..356802,356854..356860,356963..357404,357523..357644,357779..>358105))	Theileria orientalis strain Shintoku	20713111
TOT_010000154	mRNA	TOT_010000154	NC_025260.1	358309	358780	R	TOT_010000154	complement(join(<358309..358471,358545..>358780))	Theileria orientalis strain Shintoku	20713112
TOT_010000155	mRNA	TOT_010000155	NC_025260.1	359091	363423	D	TOT_010000155	join(<359091..359494,359634..359955,360006..360093,360286..360418,360526..360742,360865..>363423)	Theileria orientalis strain Shintoku	20713113
TOT_010000156	mRNA	TOT_010000156	NC_025260.1	363456	363572	R	TOT_010000156	complement(<363456..>363572)	Theileria orientalis strain Shintoku	20713114
TOT_010000157	mRNA	TOT_010000157	NC_025260.1	363772	363921	R	TOT_010000157	complement(<363772..>363921)	Theileria orientalis strain Shintoku	20713115
TOT_010001216	mRNA	TOT_010001216	NC_025260.1	364104	365591	R	TOT_010001216	complement(join(<364104..364608,364756..>365591))	Theileria orientalis strain Shintoku	20714015
TOT_010000159	mRNA	TOT_010000159	NC_025260.1	365710	366295	D	TOT_010000159	join(<365710..365863,365918..366009,366080..366101,366132..>366295)	Theileria orientalis strain Shintoku	20713116
TOT_010000160	mRNA	TOT_010000160	NC_025260.1	366410	367130	R	TOT_010000160	complement(join(<366410..366524,366672..366801,366878..366981,367024..>367130))	Theileria orientalis strain Shintoku	20713117
TOT_010000161	mRNA	TOT_010000161	NC_025260.1	367311	368600	D	TOT_010000161	join(<367311..367533,367625..367775,368028..368190,368413..368472,368502..>368600)	Theileria orientalis strain Shintoku	20713118
TOT_010001217	mRNA	TOT_010001217	NC_025260.1	368747	370053	D	TOT_010001217	join(<368747..368935,369232..369345,369504..369866,369973..>370053)	Theileria orientalis strain Shintoku	20714016
TOT_010000164	mRNA	TOT_010000164	NC_025260.1	370335	371066	D	TOT_010000164	<370335..>371066	Theileria orientalis strain Shintoku	20713119
TOT_010000165	mRNA	TOT_010000165	NC_025260.1	371089	371670	D	TOT_010000165	join(<371089..371164,371473..371595,371615..>371670)	Theileria orientalis strain Shintoku	20713120
TOT_010000166	mRNA	TOT_010000166	NC_025260.1	371714	373224	D	TOT_010000166	join(<371714..372918,373089..>373224)	Theileria orientalis strain Shintoku	20713121
TOT_010000167	mRNA	TOT_010000167	NC_025260.1	373598	374329	R	TOT_010000167	complement(<373598..>374329)	Theileria orientalis strain Shintoku	20713122
TOT_010000168	mRNA	TOT_010000168	NC_025260.1	374747	375978	R	TOT_010000168	complement(join(<374747..375519,375566..375742,375900..>375978))	Theileria orientalis strain Shintoku	20713123
TOT_010000169	mRNA	TOT_010000169	NC_025260.1	376459	378168	D	TOT_010000169	join(<376459..376535,376590..376723,377104..377210,377362..377430,377512..377574,377719..377778,377870..377969,378003..378064,378100..>378168)	Theileria orientalis strain Shintoku	20713124
TOT_010000170	mRNA	TOT_010000170	NC_025260.1	378343	379146	R	TOT_010000170	complement(<378343..>379146)	Theileria orientalis strain Shintoku	20713125
TOT_010001218	mRNA	TOT_010001218	NC_025260.1	379749	383270	R	TOT_010001218	complement(join(<379749..379843,379904..380294,380407..380531,380669..382113,382204..382363,382442..>383270))	Theileria orientalis strain Shintoku	20714017
TOT_010001219	mRNA	TOT_010001219	NC_025260.1	383825	385311	R	TOT_010001219	complement(join(<383825..383957,383990..384094,384191..384248,384279..384501,384709..384984,385183..>385311))	Theileria orientalis strain Shintoku	20714018
TOT_010000173	mRNA	TOT_010000173	NC_025260.1	385643	386885	R	TOT_010000173	complement(join(<385643..385803,385962..386696,386774..>386885))	Theileria orientalis strain Shintoku	20713126
TOT_010000174	mRNA	TOT_010000174	NC_025260.1	387151	387806	D	TOT_010000174	join(<387151..387477,387507..>387806)	Theileria orientalis strain Shintoku	20713127
TOT_010000175	mRNA	TOT_010000175	NC_025260.1	388049	388972	R	TOT_010000175	complement(join(<388049..388776,388864..>388972))	Theileria orientalis strain Shintoku	20713128
TOT_010000176	mRNA	TOT_010000176	NC_025260.1	389142	390205	R	TOT_010000176	complement(join(<389142..389824,389857..390054,390100..>390205))	Theileria orientalis strain Shintoku	20713129
TOT_010000177	mRNA	TOT_010000177	NC_025260.1	390454	390821	D	TOT_010000177	join(<390454..390456,390494..390619,390651..>390821)	Theileria orientalis strain Shintoku	20713130
TOT_010000178	mRNA	TOT_010000178	NC_025260.1	390955	391811	R	TOT_010000178	complement(join(<390955..391020,391135..391312,391345..391685,391719..>391811))	Theileria orientalis strain Shintoku	20713131
TOT_010000179	mRNA	TOT_010000179	NC_025260.1	392152	393241	R	TOT_010000179	complement(join(<392152..392264,392351..392805,392832..>393241))	Theileria orientalis strain Shintoku	20713132
TOT_010000180	mRNA	TOT_010000180	NC_025260.1	393562	395424	R	TOT_010000180	complement(join(<393562..393669,393736..393865,393897..393981,394087..394215,394248..394439,394522..394595,394628..394779,394809..394929,394962..395098,395131..395175,395206..>395424))	Theileria orientalis strain Shintoku	20713133
TOT_010000181	mRNA	TOT_010000181	NC_025260.1	395700	397509	R	TOT_010000181	complement(join(<395700..396280,396444..>397509))	Theileria orientalis strain Shintoku	20713134
TOT_010000182	mRNA	TOT_010000182	NC_025260.1	398099	400006	R	TOT_010000182	complement(join(<398099..398441,398537..398767,398835..398983,399050..>400006))	Theileria orientalis strain Shintoku	20713135
TOT_010000183	mRNA	TOT_010000183	NC_025260.1	400710	402347	D	TOT_010000183	join(<400710..400812,400842..400921,400953..>402347)	Theileria orientalis strain Shintoku	20713136
TOT_010000184	mRNA	TOT_010000184	NC_025260.1	402467	403172	R	TOT_010000184	complement(join(<402467..402504,402545..402811,402843..402955,402994..>403172))	Theileria orientalis strain Shintoku	20713137
TOT_010001220	mRNA	TOT_010001220	NC_025260.1	403475	404343	R	TOT_010001220	complement(join(<403475..403644,403717..403743,403872..403965,404023..404064,404099..404191,404224..>404343))	Theileria orientalis strain Shintoku	20714019
TOT_010001221	mRNA	TOT_010001221	NC_025260.1	404643	405156	R	TOT_010001221	complement(join(<404643..404986,405042..>405156))	Theileria orientalis strain Shintoku	20714020
TOT_010000187	mRNA	TOT_010000187	NC_025260.1	405303	405902	R	TOT_010000187	complement(<405303..>405902)	Theileria orientalis strain Shintoku	20713138
TOT_010000188	mRNA	TOT_010000188	NC_025260.1	406504	406947	D	TOT_010000188	<406504..>406947	Theileria orientalis strain Shintoku	20713139
TOT_010001222	mRNA	TOT_010001222	NC_025260.1	407126	408360	R	TOT_010001222	complement(join(<407126..407398,407429..407530,407697..407926,407958..408033,408066..408158,408190..>408360))	Theileria orientalis strain Shintoku	20714021
TOT_010000190	mRNA	TOT_010000190	NC_025260.1	408812	410992	D	TOT_010000190	join(<408812..408843,408917..409127,409159..409387,409419..409603,409643..409813,409856..409951,409998..410055,410087..410156,410290..410369,410405..410571,410608..410850,410894..>410992)	Theileria orientalis strain Shintoku	20713140
TOT_010000191	mRNA	TOT_010000191	NC_025260.1	411307	413688	D	TOT_010000191	join(<411307..411458,411490..411679,411710..412013,412046..412137,412171..412278,412333..412404,412436..412480,412571..412762,412881..412952,412984..413055,413089..413190,413223..413408,413626..>413688)	Theileria orientalis strain Shintoku	20713141
TOT_010000192	mRNA	TOT_010000192	NC_025260.1	413903	415087	R	TOT_010000192	complement(join(<413903..414099,414131..414197,414299..414393,414435..414693,414725..>415087))	Theileria orientalis strain Shintoku	20713142
TOT_010000193	mRNA	TOT_010000193	NC_025260.1	415404	415979	D	TOT_010000193	join(<415404..415713,415786..>415979)	Theileria orientalis strain Shintoku	20713143
TOT_010000194	mRNA	TOT_010000194	NC_025260.1	416024	416940	R	TOT_010000194	complement(join(<416024..416188,416219..416309,416340..416468,416501..416591,416623..416760,416796..>416940))	Theileria orientalis strain Shintoku	20713144
TOT_010000195	mRNA	TOT_010000195	NC_025260.1	417711	419831	D	TOT_010000195	join(<417711..419451,419530..419654,419688..>419831)	Theileria orientalis strain Shintoku	20713145
TOT_010000196	mRNA	TOT_010000196	NC_025260.1	420131	421147	R	TOT_010000196	complement(join(<420131..420192,420228..420414,420456..420635,420678..420920,420959..>421147))	Theileria orientalis strain Shintoku	20713146
TOT_010000197	mRNA	TOT_010000197	NC_025260.1	421220	423148	R	TOT_010000197	complement(join(<421220..421369,421508..422094,422126..422282,422322..422690,422895..422942,422975..>423148))	Theileria orientalis strain Shintoku	20713147
TOT_010000198	mRNA	TOT_010000198	NC_025260.1	423272	427679	R	TOT_010000198	complement(join(<423272..423971,423976..424580,424649..425466,425638..426869,427017..427482,427646..>427679))	Theileria orientalis strain Shintoku	20713148
TOT_010000199	mRNA	TOT_010000199	NC_025260.1	427944	428858	D	TOT_010000199	join(<427944..428012,428073..>428858)	Theileria orientalis strain Shintoku	20713149
TOT_010000200	mRNA	TOT_010000200	NC_025260.1	429165	432319	D	TOT_010000200	join(<429165..430952,431023..431103,431137..431386,431416..431612,431730..432060,432090..>432319)	Theileria orientalis strain Shintoku	20713150
TOT_010000201	mRNA	TOT_010000201	NC_025260.1	432511	435755	D	TOT_010000201	join(<432511..432648,432708..434364,434471..434557,434592..434677,434710..434833,434866..>435755)	Theileria orientalis strain Shintoku	20713151
TOT_010000202	mRNA	TOT_010000202	NC_025260.1	438498	439508	D	TOT_010000202	join(<438498..439354,439385..>439508)	Theileria orientalis strain Shintoku	20713152
TOT_010000203	mRNA	TOT_010000203	NC_025260.1	439566	441393	D	TOT_010000203	join(<439566..439649,439752..440114,440470..>441393)	Theileria orientalis strain Shintoku	20713153
TOT_010000204	mRNA	TOT_010000204	NC_025260.1	441710	444173	R	TOT_010000204	complement(join(<441710..441816,441881..442168,442216..442313,442347..442810,443170..443247,443282..443491,443522..443608,443662..443970,444000..>444173))	Theileria orientalis strain Shintoku	20713154
TOT_010000205	mRNA	TOT_010000205	NC_025260.1	444769	445555	D	TOT_010000205	join(<444769..445123,445154..445320,445352..445447,445478..>445555)	Theileria orientalis strain Shintoku	20713155
TOT_010000206	mRNA	TOT_010000206	NC_025260.1	445702	446417	R	TOT_010000206	complement(join(<445702..445905,445968..446238,446344..>446417))	Theileria orientalis strain Shintoku	20713156
TOT_010000207	mRNA	TOT_010000207	NC_025260.1	446495	446962	D	TOT_010000207	join(<446495..446590,446696..>446962)	Theileria orientalis strain Shintoku	20713157
TOT_010001223	mRNA	TOT_010001223	NC_025260.1	447067	447758	R	TOT_010001223	complement(join(<447067..447160,447199..447305,447334..447581,447614..>447758))	Theileria orientalis strain Shintoku	20714022
TOT_010001224	mRNA	TOT_010001224	NC_025260.1	447990	448599	R	TOT_010001224	complement(join(<447990..448283,448351..>448599))	Theileria orientalis strain Shintoku	20714023
TOT_010000210	mRNA	TOT_010000210	NC_025260.1	448832	449084	D	TOT_010000210	join(<448832..449001,449060..>449084)	Theileria orientalis strain Shintoku	20713158
TOT_010000211	mRNA	TOT_010000211	NC_025260.1	449463	450186	R	TOT_010000211	complement(join(<449463..449512,449546..449615,449654..449697,449736..449813,449852..449966,450013..>450186))	Theileria orientalis strain Shintoku	20713159
TOT_010000212	mRNA	TOT_010000212	NC_025260.1	451270	451505	R	TOT_010000212	complement(join(<451270..451352,451424..>451505))	Theileria orientalis strain Shintoku	20713160
TOT_010000213	mRNA	TOT_010000213	NC_025260.1	451576	465660	D	TOT_010000213	join(<451576..451728,451760..451847,451877..452565,452842..452964,453133..454844,455040..458949,459001..463215,463276..>465660)	Theileria orientalis strain Shintoku	20713161
TOT_010000214	mRNA	TOT_010000214	NC_025260.1	466249	467709	R	TOT_010000214	complement(<466249..>467709)	Theileria orientalis strain Shintoku	20713162
TOT_010000215	mRNA	TOT_010000215	NC_025260.1	468678	470330	R	TOT_010000215	complement(join(<468678..468758,468793..469186,469219..469588,469621..469690,469722..469894,469925..470027,470061..470186,470208..>470330))	Theileria orientalis strain Shintoku	20713163
TOT_010000216	mRNA	TOT_010000216	NC_025260.1	471284	471871	D	TOT_010000216	join(<471284..471404,471435..>471871)	Theileria orientalis strain Shintoku	20713164
TOT_010000217	mRNA	TOT_010000217	NC_025260.1	472058	472599	D	TOT_010000217	join(<472058..472219,472257..472408,472476..>472599)	Theileria orientalis strain Shintoku	20713165
TOT_010001184	mRNA	TOT_010001184	NC_025260.1	472718	473014	R	TOT_010001184	complement(<472718..>473014)	Theileria orientalis strain Shintoku	20713985
TOT_010000218	mRNA	TOT_010000218	NC_025260.1	473243	476548	R	TOT_010000218	complement(join(<473243..474014,474039..474552,474766..>476548))	Theileria orientalis strain Shintoku	20713166
TOT_010001225	mRNA	TOT_010001225	NC_025260.1	477438	479429	D	TOT_010001225	<477438..>479429	Theileria orientalis strain Shintoku	20714024
TOT_010000220	mRNA	TOT_010000220	NC_025260.1	479644	481005	D	TOT_010000220	join(<479644..479865,479897..480201,480232..480361,480461..480609,480653..480856,480900..>481005)	Theileria orientalis strain Shintoku	20713167
TOT_010000221	mRNA	TOT_010000221	NC_025260.1	481191	482236	D	TOT_010000221	join(<481191..481320,481361..481459,481494..481645,481742..>482236)	Theileria orientalis strain Shintoku	20713168
TOT_010000222	mRNA	TOT_010000222	NC_025260.1	482827	484611	D	TOT_010000222	<482827..>484611	Theileria orientalis strain Shintoku	20713169
TOT_010000223	mRNA	TOT_010000223	NC_025260.1	484817	486477	D	TOT_010000223	join(<484817..484886,484928..485024,485066..485130,485162..485882,486138..>486477)	Theileria orientalis strain Shintoku	20713170
TOT_010000224	mRNA	TOT_010000224	NC_025260.1	486942	489099	R	TOT_010000224	complement(join(<486942..487245,487342..487568,487756..487908,488063..488479,488509..488601,488632..488790,488821..488963,489000..>489099))	Theileria orientalis strain Shintoku	20713171
TOT_010000225	mRNA	TOT_010000225	NC_025260.1	489898	493020	D	TOT_010000225	join(<489898..490882,490913..491020,491050..491414,491447..491575,491605..491706,491738..491845,491982..492624,492655..492731,492763..>493020)	Theileria orientalis strain Shintoku	20713172
TOT_010000226	mRNA	TOT_010000226	NC_025260.1	493249	497861	D	TOT_010000226	join(<493249..493605,493645..496221,496252..497230,497407..>497861)	Theileria orientalis strain Shintoku	20713173
TOT_010000227	mRNA	TOT_010000227	NC_025260.1	498109	504498	R	TOT_010000227	complement(join(<498109..498195,498234..503604,503635..504132,504164..>504498))	Theileria orientalis strain Shintoku	20713174
TOT_010001226	mRNA	TOT_010001226	NC_025260.1	505878	507245	D	TOT_010001226	<505878..>507245	Theileria orientalis strain Shintoku	20714025
TOT_010000229	mRNA	TOT_010000229	NC_025260.1	507719	508220	D	TOT_010000229	join(<507719..507964,507996..508079,508113..>508220)	Theileria orientalis strain Shintoku	20713175
TOT_010000230	mRNA	TOT_010000230	NC_025260.1	508477	510340	R	TOT_010000230	complement(join(<508477..508599,508632..508831,508862..509044,509076..509128,509159..509186,509221..509255,509623..509731,509764..509810,509838..509944,509977..510044,510076..>510340))	Theileria orientalis strain Shintoku	20713176
TOT_010000231	mRNA	TOT_010000231	NC_025260.1	510600	510929	R	TOT_010000231	complement(join(<510600..510756,510847..>510929))	Theileria orientalis strain Shintoku	20713177
TOT_010000232	mRNA	TOT_010000232	NC_025260.1	511543	513704	D	TOT_010000232	join(<511543..512281,512312..512364,512402..512579,512616..512680,512780..512878,512921..513383,513412..513511,513542..>513704)	Theileria orientalis strain Shintoku	20713178
TOT_010000233	mRNA	TOT_010000233	NC_025260.1	513816	515724	D	TOT_010000233	join(<513816..514179,514210..514270,514302..515029,515059..515459,515527..>515724)	Theileria orientalis strain Shintoku	20713179
TOT_010000234	mRNA	TOT_010000234	NC_025260.1	515843	517006	R	TOT_010000234	complement(join(<515843..516157,516198..516272,516304..516324,516356..516650,516692..516890,516922..>517006))	Theileria orientalis strain Shintoku	20713180
TOT_010000235	mRNA	TOT_010000235	NC_025260.1	517646	519383	D	TOT_010000235	join(<517646..517962,517995..518164,518198..518283,518317..518396,518429..518687,519051..>519383)	Theileria orientalis strain Shintoku	20713181
TOT_010000236	mRNA	TOT_010000236	NC_025260.1	519566	521156	D	TOT_010000236	join(<519566..519646,519678..519796,520152..520394,520425..520530,520560..520679,520711..520971,521002..521067,521100..>521156)	Theileria orientalis strain Shintoku	20713182
TOT_010000237	mRNA	TOT_010000237	NC_025260.1	521477	523376	D	TOT_010000237	join(<521477..521567,521628..521756,521794..>523376)	Theileria orientalis strain Shintoku	20713183
TOT_010000238	mRNA	TOT_010000238	NC_025260.1	523386	524760	R	TOT_010000238	complement(join(<523386..523529,523540..>524760))	Theileria orientalis strain Shintoku	20713184
TOT_010001227	mRNA	TOT_010001227	NC_025260.1	525132	525965	D	TOT_010001227	join(<525132..525374,525404..525495,525527..525773,525805..525902,525938..>525965)	Theileria orientalis strain Shintoku	20714026
TOT_010000240	mRNA	TOT_010000240	NC_025260.1	526000	526734	R	TOT_010000240	complement(<526000..>526734)	Theileria orientalis strain Shintoku	20713185
TOT_010000241	mRNA	TOT_010000241	NC_025260.1	527370	529225	D	TOT_010000241	join(<527370..527580,527612..527800,527830..528125,528156..528378,528458..528585,528663..528747,528777..528839,529050..>529225)	Theileria orientalis strain Shintoku	20713186
TOT_010000243	mRNA	TOT_010000243	NC_025260.1	529894	538773	R	TOT_010000243	complement(join(<529894..531485,531576..531843,531955..533437,533525..534066,534169..535122,535186..535998,536233..>538773))	Theileria orientalis strain Shintoku	20713187
TOT_010001228	mRNA	TOT_010001228	NC_025260.1	539701	541651	R	TOT_010001228	complement(join(<539701..540180,540211..541001,541033..>541651))	Theileria orientalis strain Shintoku	20714027
TOT_010000245	mRNA	TOT_010000245	NC_025260.1	542736	544681	D	TOT_010000245	join(<542736..543354,543387..544171,544202..>544681)	Theileria orientalis strain Shintoku	20713188
TOT_010000246	mRNA	TOT_010000246	NC_025260.1	545252	547432	D	TOT_010000246	join(<545252..545324,545379..545450,545486..545718,545794..546121,546154..547322,547337..>547432)	Theileria orientalis strain Shintoku	20713189
TOT_010000247	mRNA	TOT_010000247	NC_025260.1	547464	547906	R	TOT_010000247	complement(join(<547464..547548,547581..547705,547740..547810,547867..>547906))	Theileria orientalis strain Shintoku	20713190
TOT_010000248	mRNA	TOT_010000248	NC_025260.1	548099	548499	R	TOT_010000248	complement(join(<548099..548361,548406..>548499))	Theileria orientalis strain Shintoku	20713191
TOT_010001229	mRNA	TOT_010001229	NC_025260.1	548606	550043	R	TOT_010001229	complement(join(<548606..548906,548938..549142,549216..549333,549364..549472,549503..549561,549593..549681,549714..549796,549829..549885,549919..>550043))	Theileria orientalis strain Shintoku	20714028
TOT_010000250	mRNA	TOT_010000250	NC_025260.1	550363	550982	R	TOT_010000250	complement(join(<550363..550453,550493..550752,550794..>550982))	Theileria orientalis strain Shintoku	20713192
TOT_010000251	mRNA	TOT_010000251	NC_025260.1	551022	553367	R	TOT_010000251	complement(join(<551022..551108,551155..551742,551782..551880,552013..552616,552748..>553367))	Theileria orientalis strain Shintoku	20713193
TOT_010000252	mRNA	TOT_010000252	NC_025260.1	553528	554228	D	TOT_010000252	join(<553528..553791,553822..553944,553973..554056,554076..>554228)	Theileria orientalis strain Shintoku	20713194
TOT_010001230	mRNA	TOT_010001230	NC_025260.1	554331	557226	R	TOT_010001230	complement(join(<554331..555367,555582..>557226))	Theileria orientalis strain Shintoku	20714029
TOT_010001231	mRNA	TOT_010001231	NC_025260.1	557266	560197	R	TOT_010001231	complement(join(<557266..557355,557567..557624,557655..557762,558549..558690,559312..559516,559547..>560197))	Theileria orientalis strain Shintoku	20714030
TOT_010000255	mRNA	TOT_010000255	NC_025260.1	560892	561538	D	TOT_010000255	join(<560892..560985,561072..561135,561175..>561538)	Theileria orientalis strain Shintoku	20713195
TOT_010000256	mRNA	TOT_010000256	NC_025260.1	561727	562622	D	TOT_010000256	join(<561727..562032,562077..>562622)	Theileria orientalis strain Shintoku	20713196
TOT_010000257	mRNA	TOT_010000257	NC_025260.1	562742	565669	R	TOT_010000257	complement(join(<562742..563339,563387..563547,563589..563777,563823..563999,564033..564094,564127..564303,564337..564545,564577..564690,564702..564859,564889..564996,565028..565185,565217..565312,565348..>565669))	Theileria orientalis strain Shintoku	20713197
TOT_010000258	mRNA	TOT_010000258	NC_025260.1	565991	567340	D	TOT_010000258	join(<565991..566120,566159..566584,566689..566954,567062..>567340)	Theileria orientalis strain Shintoku	20713198
TOT_010000259	mRNA	TOT_010000259	NC_025260.1	567540	567937	D	TOT_010000259	join(<567540..567719,567749..>567937)	Theileria orientalis strain Shintoku	20713199
TOT_010000260	mRNA	TOT_010000260	NC_025260.1	567965	571169	R	TOT_010000260	complement(join(<567965..568040,568071..568256,568520..568598,568752..568909,568941..569855,569970..570310,570399..>571169))	Theileria orientalis strain Shintoku	20713200
TOT_010000261	mRNA	TOT_010000261	NC_025260.1	571440	572413	R	TOT_010000261	complement(join(<571440..571511,571623..571727,571757..571842,571873..571940,571975..572057,572099..>572413))	Theileria orientalis strain Shintoku	20713201
TOT_010001232	mRNA	TOT_010001232	NC_025260.1	572470	576879	R	TOT_010001232	complement(join(<572470..572685,572973..574112,574523..574746,575151..>576879))	Theileria orientalis strain Shintoku	20714031
TOT_010000263	mRNA	TOT_010000263	NC_025260.1	577344	579276	D	TOT_010000263	join(<577344..577451,577540..577890,577922..578079,578113..578198,578228..578400,578434..578519,578558..578824,578858..578949,579056..>579276)	Theileria orientalis strain Shintoku	20713202
TOT_010001233	mRNA	TOT_010001233	NC_025260.1	579469	580218	R	TOT_010001233	complement(join(<579469..579567,579710..580006,580038..580102,580164..>580218))	Theileria orientalis strain Shintoku	20714032
TOT_010000265	mRNA	TOT_010000265	NC_025260.1	580573	585493	D	TOT_010000265	join(<580573..580852,580888..581114,581145..581296,581338..581503,581537..581625,581714..582194,582506..>585493)	Theileria orientalis strain Shintoku	20713203
TOT_010000266	mRNA	TOT_010000266	NC_025260.1	585624	585897	R	TOT_010000266	complement(join(<585624..585697,585728..585800,585832..>585897))	Theileria orientalis strain Shintoku	20713204
TOT_010000267	mRNA	TOT_010000267	NC_025260.1	586189	589192	R	TOT_010000267	complement(join(<586189..586284,586321..586452,586484..586546,586576..586662,586695..586790,586829..586962,587074..588353,588384..>589192))	Theileria orientalis strain Shintoku	20713205
TOT_010000268	mRNA	TOT_010000268	NC_025260.1	589665	591684	D	TOT_010000268	join(<589665..589889,589971..590072,590196..590412,590497..590553,590643..590707,590769..590895,591024..591245,591357..591469,591556..>591684)	Theileria orientalis strain Shintoku	20713206
TOT_010000269	mRNA	TOT_010000269	NC_025260.1	592015	593567	R	TOT_010000269	complement(join(<592015..592166,592353..593055,593100..593405,593496..>593567))	Theileria orientalis strain Shintoku	20713207
TOT_010001234	mRNA	TOT_010001234	NC_025260.1	594063	595550	D	TOT_010001234	join(<594063..594260,594292..594481,594569..594682,594718..594825,594919..595060,595195..595300,595440..>595550)	Theileria orientalis strain Shintoku	20714033
TOT_010000271	mRNA	TOT_010000271	NC_025260.1	595766	596002	R	TOT_010000271	complement(<595766..>596002)	Theileria orientalis strain Shintoku	20713208
TOT_010000272	mRNA	TOT_010000272	NC_025260.1	596953	597894	R	TOT_010000272	complement(<596953..>597894)	Theileria orientalis strain Shintoku	20713209
TOT_010000273	mRNA	TOT_010000273	NC_025260.1	598596	602343	D	TOT_010000273	join(<598596..598635,598704..598864,599011..599158,599290..599527,599559..599703,599769..599934,599992..600065,600212..600316,600394..600506,600638..600702,600766..601604,601875..602175,602270..>602343)	Theileria orientalis strain Shintoku	20713210
TOT_010000274	mRNA	TOT_010000274	NC_025260.1	602446	603194	D	TOT_010000274	join(<602446..602668,602800..602900,603054..>603194)	Theileria orientalis strain Shintoku	20713211
TOT_010000275	mRNA	TOT_010000275	NC_025260.1	603480	603878	D	TOT_010000275	<603480..>603878	Theileria orientalis strain Shintoku	20713212
TOT_010001235	mRNA	TOT_010001235	NC_025260.1	604091	605472	R	TOT_010001235	complement(join(<604091..604368,604435..604539,604640..604820,604861..605173,605301..605394,605451..>605472))	Theileria orientalis strain Shintoku	20714034
TOT_010001236	mRNA	TOT_010001236	NC_025260.1	606916	608546	R	TOT_010001236	complement(join(<606916..606949,607048..607119,607230..607333,607462..607608,607730..607894,607989..608087,608211..>608546))	Theileria orientalis strain Shintoku	20714035
TOT_010001237	mRNA	TOT_010001237	NC_025260.1	608921	610468	R	TOT_010001237	complement(join(<608921..609070,609175..609327,609411..609692,609780..609950,610019..610210,610281..610370,610451..>610468))	Theileria orientalis strain Shintoku	20714036
TOT_010000279	mRNA	TOT_010000279	NC_025260.1	610989	615126	D	TOT_010000279	join(<610989..611426,611512..611572,611657..612714,612853..613017,613186..613496,613606..613712,613914..614137,614609..615012,615111..>615126)	Theileria orientalis strain Shintoku	20713213
TOT_010000280	mRNA	TOT_010000280	NC_025260.1	615359	615916	D	TOT_010000280	join(<615359..615397,615641..>615916)	Theileria orientalis strain Shintoku	20713214
TOT_010000281	mRNA	TOT_010000281	NC_025260.1	616081	616841	R	TOT_010000281	complement(join(<616081..616182,616213..616318,616444..616660,616721..>616841))	Theileria orientalis strain Shintoku	20713215
TOT_010000282	mRNA	TOT_010000282	NC_025260.1	617182	623136	D	TOT_010000282	join(<617182..620366,620497..622086,622251..623031,623110..>623136)	Theileria orientalis strain Shintoku	20713216
TOT_010000283	mRNA	TOT_010000283	NC_025260.1	623224	624301	D	TOT_010000283	join(<623224..623361,623418..623575,623710..623794,623915..623996,624026..624092,624280..>624301)	Theileria orientalis strain Shintoku	20713217
TOT_010000284	mRNA	TOT_010000284	NC_025260.1	624331	625275	R	TOT_010000284	complement(<624331..>625275)	Theileria orientalis strain Shintoku	20713218
TOT_010000285	mRNA	TOT_010000285	NC_025260.1	625410	626708	D	TOT_010000285	join(<625410..625586,625652..625791,625826..625881,625941..625988,626018..626061,626118..626203,626277..626469,626499..>626708)	Theileria orientalis strain Shintoku	20713219
TOT_010001238	mRNA	TOT_010001238	NC_025260.1	626782	627228	R	TOT_010001238	complement(<626782..>627228)	Theileria orientalis strain Shintoku	20714037
TOT_010000287	mRNA	TOT_010000287	NC_025260.1	627949	629273	D	TOT_010000287	join(<627949..628080,628152..628278,628442..628537,628601..628661,628757..628854,628897..628931,628962..629162,629232..>629273)	Theileria orientalis strain Shintoku	20713220
TOT_010001239	mRNA	TOT_010001239	NC_025260.1	629476	631179	D	TOT_010001239	join(<629476..629491,629687..629841,629972..630169,630235..630312,630425..630505,630606..630718,630888..630999,631147..>631179)	Theileria orientalis strain Shintoku	20714038
TOT_010001240	mRNA	TOT_010001240	NC_025260.1	631372	632687	R	TOT_010001240	complement(join(<631372..631430,631499..>632687))	Theileria orientalis strain Shintoku	20714039
TOT_010000290	mRNA	TOT_010000290	NC_025260.1	632837	636853	D	TOT_010000290	join(<632837..632937,633008..633187,633258..633360,633419..633493,633552..633670,633753..633834,633905..633985,634077..634144,634251..634364,634503..634617,634712..634859,634998..635045,635153..635289,635488..635631,635711..636004,636488..>636853)	Theileria orientalis strain Shintoku	20713221
TOT_010001241	mRNA	TOT_010001241	NC_025260.1	637002	637760	R	TOT_010001241	complement(<637002..>637760)	Theileria orientalis strain Shintoku	20714040
TOT_010000292	mRNA	TOT_010000292	NC_025260.1	637873	638237	D	TOT_010000292	join(<637873..638162,638189..>638237)	Theileria orientalis strain Shintoku	20713222
TOT_010000293	mRNA	TOT_010000293	NC_025260.1	638400	640777	R	TOT_010000293	complement(join(<638400..638759,638847..638960,639066..639168,639210..639336,639411..639676,639818..640057,640128..640214,640293..>640777))	Theileria orientalis strain Shintoku	20713223
TOT_010000294	mRNA	TOT_010000294	NC_025260.1	641108	641704	R	TOT_010000294	complement(join(<641108..641164,641205..641266,641301..641367,641399..>641704))	Theileria orientalis strain Shintoku	20713224
TOT_010000295	mRNA	TOT_010000295	NC_025260.1	642301	645371	D	TOT_010000295	join(<642301..643694,643827..644069,644240..644557,644947..645171,645248..>645371)	Theileria orientalis strain Shintoku	20713225
TOT_010000296	mRNA	TOT_010000296	NC_025260.1	645704	646121	D	TOT_010000296	join(<645704..645969,645998..>646121)	Theileria orientalis strain Shintoku	20713226
TOT_010000297	mRNA	TOT_010000297	NC_025260.1	646143	648139	R	TOT_010000297	complement(join(<646143..646179,646233..646586,646695..646954,647068..647583,647743..647869,648078..>648139))	Theileria orientalis strain Shintoku	20713227
TOT_010001242	mRNA	TOT_010001242	NC_025260.1	650154	653996	D	TOT_010001242	join(<650154..650423,650589..650817,650989..651902,652047..652861,652964..>653996)	Theileria orientalis strain Shintoku	20714041
TOT_010000299	mRNA	TOT_010000299	NC_025260.1	654312	655282	R	TOT_010000299	complement(join(<654312..654703,654769..655093,655280..>655282))	Theileria orientalis strain Shintoku	20713228
TOT_010000300	mRNA	TOT_010000300	NC_025260.1	655414	663978	R	TOT_010000300	complement(join(<655414..662340,662590..662678,662910..>663978))	Theileria orientalis strain Shintoku	20713229
TOT_010000301	mRNA	TOT_010000301	NC_025260.1	664249	665301	R	TOT_010000301	complement(join(<664249..664348,664390..664479,664512..664590,664630..664835,664961..>665301))	Theileria orientalis strain Shintoku	20713230
TOT_010001243	mRNA	TOT_010001243	NC_025260.1	665699	666670	R	TOT_010001243	complement(join(<665699..665817,665848..666008,666074..666140,666214..666252,666289..666450,666541..>666670))	Theileria orientalis strain Shintoku	20714042
TOT_010000303	mRNA	TOT_010000303	NC_025260.1	666776	668066	R	TOT_010000303	complement(join(<666776..666913,667029..667326,667428..667671,667790..>668066))	Theileria orientalis strain Shintoku	20713231
TOT_010000304	mRNA	TOT_010000304	NC_025260.1	668502	669287	D	TOT_010000304	join(<668502..668561,668601..668698,668795..668894,668925..669107,669186..>669287)	Theileria orientalis strain Shintoku	20713232
TOT_010001244	mRNA	TOT_010001244	NC_025260.1	669393	669719	R	TOT_010001244	complement(<669393..>669719)	Theileria orientalis strain Shintoku	20714043
TOT_010000306	mRNA	TOT_010000306	NC_025260.1	670380	671641	R	TOT_010000306	complement(join(<670380..671444,671519..>671641))	Theileria orientalis strain Shintoku	20713233
TOT_010000307	mRNA	TOT_010000307	NC_025260.1	672564	674582	D	TOT_010000307	join(<672564..672599,672634..672712,672794..672905,672954..673091,673263..673516,673597..673909,673953..674138,674306..>674582)	Theileria orientalis strain Shintoku	20713234
TOT_010001245	mRNA	TOT_010001245	NC_025260.1	674640	675351	R	TOT_010001245	complement(join(<674640..674797,674835..>675351))	Theileria orientalis strain Shintoku	20714044
TOT_010001246	mRNA	TOT_010001246	NC_025260.1	675652	676994	R	TOT_010001246	complement(join(<675652..675718,675801..675872,675932..676027,676121..676209,676332..676456,676534..676673,676744..>676994))	Theileria orientalis strain Shintoku	20714045
TOT_010000309	mRNA	TOT_010000309	NC_025260.1	677328	677779	D	TOT_010000309	join(<677328..677469,677524..677676,677718..>677779)	Theileria orientalis strain Shintoku	20713235
TOT_010000310	mRNA	TOT_010000310	NC_025260.1	677881	679247	R	TOT_010000310	complement(join(<677881..677936,677968..678107,678205..678278,678389..678497,678569..678656,678712..678911,678945..679041,679157..>679247))	Theileria orientalis strain Shintoku	20713236
TOT_010000311	mRNA	TOT_010000311	NC_025260.1	679406	686982	D	TOT_010000311	join(<679406..682114,682424..685039,685193..686176,686218..686466,686572..>686982)	Theileria orientalis strain Shintoku	20713237
TOT_010000312	mRNA	TOT_010000312	NC_025260.1	687420	688286	D	TOT_010000312	<687420..>688286	Theileria orientalis strain Shintoku	20713238
TOT_010000313	mRNA	TOT_010000313	NC_025260.1	688428	688592	R	TOT_010000313	complement(<688428..>688592)	Theileria orientalis strain Shintoku	20713239
TOT_010000314	mRNA	TOT_010000314	NC_025260.1	688646	690767	R	TOT_010000314	complement(join(<688646..688813,688884..689059,689260..689602,689795..689923,689955..>690767))	Theileria orientalis strain Shintoku	20713240
TOT_010000315	mRNA	TOT_010000315	NC_025260.1	690916	692914	D	TOT_010000315	join(<690916..691065,691129..691365,691515..691582,691945..>692914)	Theileria orientalis strain Shintoku	20713241
TOT_010000316	mRNA	TOT_010000316	NC_025260.1	693376	695381	R	TOT_010000316	complement(join(<693376..693776,693812..694024,694112..694304,694435..694542,694617..694858,694917..694965,695033..695151,695222..>695381))	Theileria orientalis strain Shintoku	20713242
TOT_010000317	mRNA	TOT_010000317	NC_025260.1	696204	698045	D	TOT_010000317	join(<696204..696953,697182..>698045)	Theileria orientalis strain Shintoku	20713243
TOT_010000318	mRNA	TOT_010000318	NC_025260.1	698347	699758	R	TOT_010000318	complement(join(<698347..699362,699395..699541,699632..>699758))	Theileria orientalis strain Shintoku	20713244
TOT_010000319	mRNA	TOT_010000319	NC_025260.1	700198	701076	D	TOT_010000319	<700198..>701076	Theileria orientalis strain Shintoku	20713245
TOT_010000320	mRNA	TOT_010000320	NC_025260.1	701324	703920	D	TOT_010000320	join(<701324..701657,701692..702302,702341..702458,702488..702588,702675..703019,703103..703385,703428..703473,703604..703699,703809..>703920)	Theileria orientalis strain Shintoku	20713246
TOT_010000321	mRNA	TOT_010000321	NC_025260.1	704383	706011	R	TOT_010000321	complement(join(<704383..704580,704611..704631,704696..704814,704870..704930,704974..705042,705227..705408,705519..705685,705721..705766,705822..>706011))	Theileria orientalis strain Shintoku	20713247
TOT_010000322	mRNA	TOT_010000322	NC_025260.1	706358	706911	R	TOT_010000322	complement(join(<706358..706439,706451..>706911))	Theileria orientalis strain Shintoku	20713248
TOT_010000323	mRNA	TOT_010000323	NC_025260.1	707443	708077	R	TOT_010000323	complement(join(<707443..707603,707686..707971,708009..>708077))	Theileria orientalis strain Shintoku	20713249
TOT_010000324	mRNA	TOT_010000324	NC_025260.1	708649	710802	R	TOT_010000324	complement(join(<708649..708971,709005..709068,709135..709292,709326..709455,709550..709617,709704..709816,709873..709988,710065..710148,710179..710614,710648..>710802))	Theileria orientalis strain Shintoku	20713250
TOT_010000325	mRNA	TOT_010000325	NC_025260.1	710905	715078	R	TOT_010000325	complement(join(<710905..711019,711063..711643,711807..711883,711984..712095,712139..712324,712391..712447,712603..712683,713073..713192,713274..714136,714374..714692,714767..>715078))	Theileria orientalis strain Shintoku	20713251
TOT_010000326	mRNA	TOT_010000326	NC_025260.1	716162	718024	D	TOT_010000326	<716162..>718024	Theileria orientalis strain Shintoku	20713252
TOT_010000327	mRNA	TOT_010000327	NC_025260.1	718242	720038	R	TOT_010000327	complement(join(<718242..718631,718718..718799,718862..719015,719032..719146,719224..719392,719506..719574,719606..719698,719791..>720038))	Theileria orientalis strain Shintoku	20713253
TOT_010000328	mRNA	TOT_010000328	NC_025260.1	720404	722269	R	TOT_010000328	complement(join(<720404..720509,720593..720891,720933..721015,721045..721109,721149..721196,721232..721479,721510..721607,721640..721892,721940..>722269))	Theileria orientalis strain Shintoku	20713254
TOT_010000329	mRNA	TOT_010000329	NC_025260.1	722668	723627	D	TOT_010000329	<722668..>723627	Theileria orientalis strain Shintoku	20713255
TOT_010000330	mRNA	TOT_010000330	NC_025260.1	724238	725849	D	TOT_010000330	join(<724238..724394,724550..724641,724673..724782,724934..725672,725805..>725849)	Theileria orientalis strain Shintoku	20713256
TOT_010000331	mRNA	TOT_010000331	NC_025260.1	726188	727185	D	TOT_010000331	join(<726188..726244,726346..>727185)	Theileria orientalis strain Shintoku	20713257
TOT_010000332	mRNA	TOT_010000332	NC_025260.1	727261	729988	D	TOT_010000332	join(<727261..727266,727288..727416,727456..727566,727604..727690,727725..727868,728054..728221,728276..728622,728656..728935,728959..729153,729218..729313,729374..729569,729807..>729988)	Theileria orientalis strain Shintoku	20713258
TOT_010000333	mRNA	TOT_010000333	NC_025260.1	732838	735802	R	TOT_010000333	complement(join(<732838..733042,733127..733185,733271..733335,733395..733563,733650..733782,733865..733921,733999..734075,734182..734301,734342..734390,734429..734536,734568..734661,734702..734806,734920..735135,735167..735241,735269..735401,735434..735514,735544..735636,735677..>735802))	Theileria orientalis strain Shintoku	20713259
TOT_010000334	mRNA	TOT_010000334	NC_025260.1	736028	737341	R	TOT_010000334	complement(join(<736028..736087,736119..736348,736431..736560,736591..736688,736720..736778,736820..737009,737041..737181,737212..>737341))	Theileria orientalis strain Shintoku	20713260
TOT_010000335	mRNA	TOT_010000335	NC_025260.1	737921	741030	R	TOT_010000335	complement(join(<737921..739650,739815..>741030))	Theileria orientalis strain Shintoku	20713261
TOT_010000336	mRNA	TOT_010000336	NC_025260.1	741503	743371	D	TOT_010000336	join(<741503..741674,741711..741803,741833..741892,741923..742047,742079..742196,742228..742398,742429..742506,742596..742794,742827..742904,742935..743072,743104..>743371)	Theileria orientalis strain Shintoku	20713262
TOT_010000337	mRNA	TOT_010000337	NC_025260.1	743795	745057	D	TOT_010000337	join(<743795..743857,743900..744016,744051..744221,744252..744330,744372..744488,744610..744793,744856..>745057)	Theileria orientalis strain Shintoku	20713263
TOT_010000338	mRNA	TOT_010000338	NC_025260.1	745179	745556	R	TOT_010000338	complement(join(<745179..745218,745250..745355,745399..745489,745539..>745556))	Theileria orientalis strain Shintoku	20713264
TOT_010000339	mRNA	TOT_010000339	NC_025260.1	745797	746952	D	TOT_010000339	join(<745797..745889,745931..746045,746079..746114,746150..746328,746359..746427,746460..746705,746848..>746952)	Theileria orientalis strain Shintoku	20713265
TOT_010000340	mRNA	TOT_010000340	NC_025260.1	747326	751029	D	TOT_010000340	join(<747326..748574,748683..748970,749001..750509,750935..>751029)	Theileria orientalis strain Shintoku	20713266
TOT_010000341	mRNA	TOT_010000341	NC_025260.1	751113	751955	D	TOT_010000341	<751113..>751955	Theileria orientalis strain Shintoku	20713267
TOT_010000342	mRNA	TOT_010000342	NC_025260.1	752422	752949	D	TOT_010000342	join(<752422..752686,752716..752852,752887..>752949)	Theileria orientalis strain Shintoku	20713268
TOT_010000343	mRNA	TOT_010000343	NC_025260.1	753420	755814	R	TOT_010000343	complement(join(<753420..753512,753720..754645,754860..>755814))	Theileria orientalis strain Shintoku	20713269
TOT_010000344	mRNA	TOT_010000344	NC_025260.1	756395	757828	R	TOT_010000344	complement(join(<756395..757002,757102..>757828))	Theileria orientalis strain Shintoku	20713270
TOT_010000345	mRNA	TOT_010000345	NC_025260.1	758215	759527	D	TOT_010000345	join(<758215..758998,759028..759096,759306..759378,759455..>759527)	Theileria orientalis strain Shintoku	20713271
TOT_010000346	mRNA	TOT_010000346	NC_025260.1	759720	766666	R	TOT_010000346	complement(join(<759720..760522,760777..761469,761704..761979,762073..762309,762370..762630,762811..764016,764360..765736,765886..766234,766289..>766666))	Theileria orientalis strain Shintoku	20713272
TOT_010000347	mRNA	TOT_010000347	NC_025260.1	767486	770499	D	TOT_010000347	join(<767486..767543,767586..768135,768313..768406,768448..768618,768739..768997,769091..769177,769281..769359,769410..769685,769941..770067,770200..770289,770374..>770499)	Theileria orientalis strain Shintoku	20713273
TOT_010000348	mRNA	TOT_010000348	NC_025260.1	770862	773114	R	TOT_010000348	complement(join(<770862..771516,771808..771944,771987..>773114))	Theileria orientalis strain Shintoku	20713274
TOT_010000349	mRNA	TOT_010000349	NC_025260.1	773321	775203	R	TOT_010000349	complement(join(<773321..773436,773541..773895,773937..774237,774435..774892,774922..>775203))	Theileria orientalis strain Shintoku	20713275
TOT_010000350	mRNA	TOT_010000350	NC_025260.1	775455	778393	R	TOT_010000350	complement(join(<775455..778034,778068..778252,778276..>778393))	Theileria orientalis strain Shintoku	20713276
TOT_010001247	mRNA	TOT_010001247	NC_025260.1	778850	779653	R	TOT_010001247	complement(join(<778850..779403,779446..>779653))	Theileria orientalis strain Shintoku	20714046
TOT_010001248	mRNA	TOT_010001248	NC_025260.1	780263	780655	D	TOT_010001248	<780263..>780655	Theileria orientalis strain Shintoku	20714047
TOT_010000353	mRNA	TOT_010000353	NC_025260.1	780805	784152	R	TOT_010000353	complement(join(<780805..780984,781053..781163,781310..781419,781590..782772,782915..783003,783081..>784152))	Theileria orientalis strain Shintoku	20713277
TOT_010000354	mRNA	TOT_010000354	NC_025260.1	784401	785243	R	TOT_010000354	complement(join(<784401..784592,784668..784778,784908..785114,785181..>785243))	Theileria orientalis strain Shintoku	20713278
TOT_010000355	mRNA	TOT_010000355	NC_025260.1	785355	788813	D	TOT_010000355	<785355..>788813	Theileria orientalis strain Shintoku	20713279
TOT_010000356	mRNA	TOT_010000356	NC_025260.1	789070	792162	D	TOT_010000356	join(<789070..791265,791314..>792162)	Theileria orientalis strain Shintoku	20713280
TOT_010000357	mRNA	TOT_010000357	NC_025260.1	792383	792577	R	TOT_010000357	complement(<792383..>792577)	Theileria orientalis strain Shintoku	20713281
TOT_010000358	mRNA	TOT_010000358	NC_025260.1	792821	793770	R	TOT_010000358	complement(join(<792821..792985,793042..793112,793148..793490,793585..>793770))	Theileria orientalis strain Shintoku	20713282
TOT_010000359	mRNA	TOT_010000359	NC_025260.1	794190	795067	R	TOT_010000359	complement(join(<794190..794314,794348..794537,794696..>795067))	Theileria orientalis strain Shintoku	20713283
TOT_010000360	mRNA	TOT_010000360	NC_025260.1	795612	796658	R	TOT_010000360	complement(join(<795612..795938,795995..796182,796239..796277,796325..796432,796473..796566,796602..>796658))	Theileria orientalis strain Shintoku	20713284
TOT_010000361	mRNA	TOT_010000361	NC_025260.1	796906	798471	R	TOT_010000361	complement(join(<796906..797631,797674..>798471))	Theileria orientalis strain Shintoku	20713285
TOT_010000362	mRNA	TOT_010000362	NC_025260.1	798680	799075	D	TOT_010000362	join(<798680..798781,798914..>799075)	Theileria orientalis strain Shintoku	20713286
TOT_010000363	mRNA	TOT_010000363	NC_025260.1	799361	801434	D	TOT_010000363	join(<799361..800072,800183..801146,801263..>801434)	Theileria orientalis strain Shintoku	20713287
TOT_010000364	mRNA	TOT_010000364	NC_025260.1	801595	802886	D	TOT_010000364	join(<801595..802716,802833..>802886)	Theileria orientalis strain Shintoku	20713288
TOT_010000365	mRNA	TOT_010000365	NC_025260.1	802893	805044	R	TOT_010000365	complement(join(<802893..803331,803458..803584,803770..803858,803891..>805044))	Theileria orientalis strain Shintoku	20713289
TOT_010000366	mRNA	TOT_010000366	NC_025260.1	805358	805513	R	TOT_010000366	complement(<805358..>805513)	Theileria orientalis strain Shintoku	20713290
TOT_010000367	mRNA	TOT_010000367	NC_025260.1	805609	813067	D	TOT_010000367	join(<805609..808551,808708..809048,809243..809834,810279..810905,811158..812528,812689..812756,812788..>813067)	Theileria orientalis strain Shintoku	20713291
TOT_010000368	mRNA	TOT_010000368	NC_025260.1	813941	817750	D	TOT_010000368	<813941..>817750	Theileria orientalis strain Shintoku	20713292
TOT_010000369	mRNA	TOT_010000369	NC_025260.1	818225	819435	R	TOT_010000369	complement(join(<818225..818809,818974..>819435))	Theileria orientalis strain Shintoku	20713293
TOT_010000370	mRNA	TOT_010000370	NC_025260.1	819716	820168	D	TOT_010000370	join(<819716..819883,819944..>820168)	Theileria orientalis strain Shintoku	20713294
TOT_010000371	mRNA	TOT_010000371	NC_025260.1	820486	821730	D	TOT_010000371	join(<820486..820560,820888..820953,821045..821110,821168..821455,821557..821625,821662..>821730)	Theileria orientalis strain Shintoku	20713295
TOT_010000372	mRNA	TOT_010000372	NC_025260.1	822099	822760	R	TOT_010000372	complement(join(<822099..822619,822715..>822760))	Theileria orientalis strain Shintoku	20713296
TOT_010000373	mRNA	TOT_010000373	NC_025260.1	823126	824248	R	TOT_010000373	complement(join(<823126..823262,823365..823457,823493..823559,823597..823646,823681..823851,823882..>824248))	Theileria orientalis strain Shintoku	20713297
TOT_010000374	mRNA	TOT_010000374	NC_025260.1	824425	828036	D	TOT_010000374	join(<824425..825384,825417..825467,825501..826005,826104..826238,826276..826403,826464..826553,826600..826691,826854..827118,827151..827252,827284..827340,827518..>828036)	Theileria orientalis strain Shintoku	20713298
TOT_010000375	mRNA	TOT_010000375	NC_025260.1	828189	828484	D	TOT_010000375	join(<828189..828293,828323..>828484)	Theileria orientalis strain Shintoku	20713299
TOT_010000376	mRNA	TOT_010000376	NC_025260.1	828608	830806	R	TOT_010000376	complement(join(<828608..829703,829866..>830806))	Theileria orientalis strain Shintoku	20713300
TOT_010001249	mRNA	TOT_010001249	NC_025260.1	831093	831524	R	TOT_010001249	complement(join(<831093..831209,831244..831390,831477..>831524))	Theileria orientalis strain Shintoku	20714048
TOT_010000378	mRNA	TOT_010000378	NC_025260.1	831698	834937	R	TOT_010000378	complement(join(<831698..832968,833326..>834937))	Theileria orientalis strain Shintoku	20713301
TOT_010000379	mRNA	TOT_010000379	NC_025260.1	835605	839790	D	TOT_010000379	join(<835605..838130,838315..>839790)	Theileria orientalis strain Shintoku	20713302
TOT_010001250	mRNA	TOT_010001250	NC_025260.1	840071	840746	D	TOT_010001250	join(<840071..840213,840362..840440,840474..840644,840678..>840746)	Theileria orientalis strain Shintoku	20714049
TOT_010001251	mRNA	TOT_010001251	NC_025260.1	841235	842520	D	TOT_010001251	join(<841235..841637,841669..842195,842236..>842520)	Theileria orientalis strain Shintoku	20714050
TOT_010000382	mRNA	TOT_010000382	NC_025260.1	842757	843380	D	TOT_010000382	join(<842757..842950,842981..843044,843118..843285,843318..>843380)	Theileria orientalis strain Shintoku	20713303
TOT_010000383	mRNA	TOT_010000383	NC_025260.1	843568	845492	R	TOT_010000383	complement(join(<843568..844956,845217..>845492))	Theileria orientalis strain Shintoku	20713304
TOT_010000384	mRNA	TOT_010000384	NC_025260.1	845507	845974	R	TOT_010000384	complement(<845507..>845974)	Theileria orientalis strain Shintoku	20713305
TOT_010000385	mRNA	TOT_010000385	NC_025260.1	846386	849841	R	TOT_010000385	complement(<846386..>849841)	Theileria orientalis strain Shintoku	20713306
TOT_010000386	mRNA	TOT_010000386	NC_025260.1	849841	851689	R	TOT_010000386	complement(join(<849841..849962,850303..>851689))	Theileria orientalis strain Shintoku	20713307
TOT_010000387	mRNA	TOT_010000387	NC_025260.1	853773	856965	D	TOT_010000387	join(<853773..854271,854310..854887,855002..855231,855369..>856965)	Theileria orientalis strain Shintoku	20713308
TOT_010000388	mRNA	TOT_010000388	NC_025260.1	857015	858671	R	TOT_010000388	complement(join(<857015..857072,857095..>858671))	Theileria orientalis strain Shintoku	20713309
TOT_010000389	mRNA	TOT_010000389	NC_025260.1	858835	859692	R	TOT_010000389	complement(join(<858835..858935,858997..859139,859179..859294,859328..859417,859451..859575,859614..>859692))	Theileria orientalis strain Shintoku	20713310
TOT_010000390	mRNA	TOT_010000390	NC_025260.1	859896	879670	R	TOT_010000390	complement(join(<859896..860858,860889..867349,867380..868084,868099..868318,868349..868707,868737..868802,868834..868917,868948..869163,869194..869535,869565..869885,869916..870206,870238..870375,870405..870605,870690..870901,871028..874526,874559..875125,875245..>879670))	Theileria orientalis strain Shintoku	20713311
TOT_010000391	mRNA	TOT_010000391	NC_025260.1	880083	881341	D	TOT_010000391	join(<880083..880126,880157..880233,880265..880879,880910..880983,881015..>881341)	Theileria orientalis strain Shintoku	20713312
TOT_010000392	mRNA	TOT_010000392	NC_025260.1	881505	883079	D	TOT_010000392	join(<881505..881700,881731..881882,881917..882052,882084..882297,882328..882556,882606..882823,882857..>883079)	Theileria orientalis strain Shintoku	20713313
TOT_010001185	mRNA	TOT_010001185	NC_025260.1	883221	891585	R	TOT_010001185	complement(join(<883221..884375,884522..885351,885490..887478,887661..890764,890795..890968,891001..891116,891146..891402,891486..>891585))	Theileria orientalis strain Shintoku	20713986
TOT_010000393	mRNA	TOT_010000393	NC_025260.1	891695	892251	R	TOT_010000393	complement(join(<891695..891898,891940..>892251))	Theileria orientalis strain Shintoku	20713314
TOT_010001252	mRNA	TOT_010001252	NC_025260.1	892469	893134	D	TOT_010001252	<892469..>893134	Theileria orientalis strain Shintoku	20714051
TOT_010000394	mRNA	TOT_010000394	NC_025260.1	893225	896544	D	TOT_010000394	join(<893225..893277,893319..893395,893438..893517,893733..893816,893851..893913,893952..894032,894062..894331,894365..894403,894438..894557,894609..894748,894808..894944,895050..895408,895453..895590,895625..895733,895765..895975,896010..896094,896125..896167,896276..>896544)	Theileria orientalis strain Shintoku	20713315
TOT_010000395	mRNA	TOT_010000395	NC_025260.1	896610	897282	R	TOT_010000395	complement(join(<896610..896833,896866..897151,897196..>897282))	Theileria orientalis strain Shintoku	20713316
TOT_010000396	mRNA	TOT_010000396	NC_025260.1	897451	899378	D	TOT_010000396	join(<897451..898839,898872..>899378)	Theileria orientalis strain Shintoku	20713317
TOT_010000397	mRNA	TOT_010000397	NC_025260.1	899956	900036	R	TOT_010000397	complement(<899956..>900036)	Theileria orientalis strain Shintoku	20713318
TOT_010000398	mRNA	TOT_010000398	NC_025260.1	905089	905947	D	TOT_010000398	join(<905089..905147,905213..905269,905519..905675,905681..>905947)	Theileria orientalis strain Shintoku	20713319
TOT_010000399	mRNA	TOT_010000399	NC_025260.1	906146	906926	D	TOT_010000399	join(<906146..906205,906483..906671,906804..>906926)	Theileria orientalis strain Shintoku	20713320
TOT_010000400	mRNA	TOT_010000400	NC_025260.1	909823	910123	D	TOT_010000400	join(<909823..909878,909949..>910123)	Theileria orientalis strain Shintoku	20713321
TOT_010000401	mRNA	TOT_010000401	NC_025260.1	911611	914577	R	TOT_010000401	complement(join(<911611..911754,911784..911929,911959..912061,912090..912204,912403..912518,912549..913672,913896..914135,914158..914302,914323..>914577))	Theileria orientalis strain Shintoku	20713322
TOT_010000402	mRNA	TOT_010000402	NC_025260.1	914714	919093	R	TOT_010000402	complement(join(<914714..914786,914881..915196,915369..918345,918376..918565,918625..918914,918944..918991,919022..>919093))	Theileria orientalis strain Shintoku	20713323
TOT_010000403	mRNA	TOT_010000403	NC_025260.1	919638	920400	D	TOT_010000403	join(<919638..919901,919932..919983,920201..920299,920330..>920400)	Theileria orientalis strain Shintoku	20713324
TOT_010000404	mRNA	TOT_010000404	NC_025260.1	920687	922873	R	TOT_010000404	complement(<920687..>922873)	Theileria orientalis strain Shintoku	20713325
TOT_010000405	mRNA	TOT_010000405	NC_025260.1	923105	924000	D	TOT_010000405	join(<923105..923479,923564..923944,923992..>924000)	Theileria orientalis strain Shintoku	20713326
TOT_010000406	mRNA	TOT_010000406	NC_025260.1	924308	926200	R	TOT_010000406	complement(<924308..>926200)	Theileria orientalis strain Shintoku	20713327
TOT_010000407	mRNA	TOT_010000407	NC_025260.1	926245	926457	D	TOT_010000407	<926245..>926457	Theileria orientalis strain Shintoku	20713328
TOT_010000408	mRNA	TOT_010000408	NC_025260.1	926753	935932	R	TOT_010000408	complement(<926753..>935932)	Theileria orientalis strain Shintoku	20713329
TOT_010000409	mRNA	TOT_010000409	NC_025260.1	936441	937766	R	TOT_010000409	complement(join(<936441..937107,937165..>937766))	Theileria orientalis strain Shintoku	20713330
TOT_010001253	mRNA	TOT_010001253	NC_025260.1	938798	940899	D	TOT_010001253	join(<938798..939464,939507..939598,939691..939758,939808..939942,940065..940155,940276..940466,940497..940742,940773..>940899)	Theileria orientalis strain Shintoku	20714052
TOT_010001254	mRNA	TOT_010001254	NC_025260.1	941172	941527	D	TOT_010001254	join(<941172..941321,941362..941457,941495..>941527)	Theileria orientalis strain Shintoku	20714053
TOT_010001255	mRNA	TOT_010001255	NC_025260.1	942177	943841	D	TOT_010001255	join(<942177..942804,942963..943127,943378..>943841)	Theileria orientalis strain Shintoku	20714054
TOT_010000413	mRNA	TOT_010000413	NC_025260.1	943983	944851	D	TOT_010000413	join(<943983..944222,944260..944454,944488..944610,944642..>944851)	Theileria orientalis strain Shintoku	20713331
TOT_010000414	mRNA	TOT_010000414	NC_025260.1	945217	946189	R	TOT_010000414	complement(join(<945217..945501,945531..945632,945663..945765,945801..946011,946114..>946189))	Theileria orientalis strain Shintoku	20713332
TOT_010000415	mRNA	TOT_010000415	NC_025260.1	946329	949041	R	TOT_010000415	complement(join(<946329..946485,946517..946883,946968..>949041))	Theileria orientalis strain Shintoku	20713333
TOT_010001256	mRNA	TOT_010001256	NC_025260.1	949442	950289	D	TOT_010001256	join(<949442..949700,949752..949777,949809..949899,950148..950221,950251..>950289)	Theileria orientalis strain Shintoku	20714055
TOT_010001257	mRNA	TOT_010001257	NC_025260.1	950595	951956	R	TOT_010001257	complement(join(<950595..950732,950816..951004,951147..>951956))	Theileria orientalis strain Shintoku	20714056
TOT_010001258	mRNA	TOT_010001258	NC_025260.1	952619	952777	D	TOT_010001258	<952619..>952777	Theileria orientalis strain Shintoku	20714057
TOT_010000419	mRNA	TOT_010000419	NC_025260.1	953130	953898	R	TOT_010000419	complement(join(<953130..953299,953326..953730,953736..>953898))	Theileria orientalis strain Shintoku	20713334
TOT_010000420	mRNA	TOT_010000420	NC_025260.1	954061	956844	D	TOT_010000420	<954061..>956844	Theileria orientalis strain Shintoku	20713335
TOT_010000421	mRNA	TOT_010000421	NC_025260.1	956872	960724	R	TOT_010000421	complement(join(<956872..957046,957126..957240,957448..958667,958803..958988,959166..>960724))	Theileria orientalis strain Shintoku	20713336
TOT_010000422	mRNA	TOT_010000422	NC_025260.1	961221	964178	R	TOT_010000422	complement(join(<961221..961565,961782..>964178))	Theileria orientalis strain Shintoku	20713337
TOT_010000423	mRNA	TOT_010000423	NC_025260.1	964932	967184	R	TOT_010000423	complement(join(<964932..965453,965485..965573,965693..966030,966061..>967184))	Theileria orientalis strain Shintoku	20713338
TOT_010000424	mRNA	TOT_010000424	NC_025260.1	967552	970536	D	TOT_010000424	<967552..>970536	Theileria orientalis strain Shintoku	20713339
TOT_010000425	mRNA	TOT_010000425	NC_025260.1	970799	972385	R	TOT_010000425	complement(<970799..>972385)	Theileria orientalis strain Shintoku	20713340
TOT_010001259	mRNA	TOT_010001259	NC_025260.1	976199	993316	D	TOT_010001259	join(<976199..976232,976319..979749,980113..980905,981122..981932,982089..983621,983715..984103,984322..986170,986444..988531,989105..991058,991231..991403,991434..991552,991707..992361,992413..992987,993033..>993316)	Theileria orientalis strain Shintoku	20714058
TOT_010000427	mRNA	TOT_010000427	NC_025260.1	993395	996091	D	TOT_010000427	join(<993395..993844,994052..994488,994720..995588,996036..>996091)	Theileria orientalis strain Shintoku	20713341
TOT_010000428	mRNA	TOT_010000428	NC_025260.1	996183	997717	D	TOT_010000428	join(<996183..997331,997481..>997717)	Theileria orientalis strain Shintoku	20713342
TOT_010001260	mRNA	TOT_010001260	NC_025260.1	998042	999833	R	TOT_010001260	complement(join(<998042..998592,998734..999702,999740..>999833))	Theileria orientalis strain Shintoku	20714059
TOT_010000430	mRNA	TOT_010000430	NC_025260.1	1000375	1002516	D	TOT_010000430	<1000375..>1002516	Theileria orientalis strain Shintoku	20713343
TOT_010000431	mRNA	TOT_010000431	NC_025260.1	1003019	1005334	R	TOT_010000431	complement(join(<1003019..1004775,1004957..1005077,1005116..>1005334))	Theileria orientalis strain Shintoku	20713344
TOT_010000432	mRNA	TOT_010000432	NC_025260.1	1005994	1009564	D	TOT_010000432	join(<1005994..1006558,1006649..1007987,1008162..1008311,1008407..1009022,1009190..1009291,1009322..>1009564)	Theileria orientalis strain Shintoku	20713345
TOT_010000433	mRNA	TOT_010000433	NC_025260.1	1009739	1011570	R	TOT_010000433	complement(join(<1009739..1010137,1010155..>1011570))	Theileria orientalis strain Shintoku	20713346
TOT_010001261	mRNA	TOT_010001261	NC_025260.1	1014061	1016303	D	TOT_010001261	join(<1014061..1014941,1015383..1015998,1016247..>1016303)	Theileria orientalis strain Shintoku	20714060
TOT_010000435	mRNA	TOT_010000435	NC_025260.1	1016509	1016895	R	TOT_010000435	complement(<1016509..>1016895)	Theileria orientalis strain Shintoku	20713347
TOT_010000436	mRNA	TOT_010000436	NC_025260.1	1017038	1018777	R	TOT_010000436	complement(join(<1017038..1017144,1017249..1017320,1017402..1017502,1017547..1017593,1017712..1017846,1018262..1018325,1018417..1018529,1018620..1018675,1018708..>1018777))	Theileria orientalis strain Shintoku	20713348
TOT_010000437	mRNA	TOT_010000437	NC_025260.1	1018880	1021054	R	TOT_010000437	complement(<1018880..>1021054)	Theileria orientalis strain Shintoku	20713349
TOT_010000438	mRNA	TOT_010000438	NC_025260.1	1021098	1022507	R	TOT_010000438	complement(join(<1021098..1021226,1021278..1021387,1021627..1022133,1022231..>1022507))	Theileria orientalis strain Shintoku	20713350
TOT_010000439	mRNA	TOT_010000439	NC_025260.1	1022557	1023081	R	TOT_010000439	complement(join(<1022557..1022719,1022812..1022858,1023025..>1023081))	Theileria orientalis strain Shintoku	20713351
TOT_010000440	mRNA	TOT_010000440	NC_025260.1	1023546	1026299	D	TOT_010000440	join(<1023546..1023644,1023757..1023897,1024038..>1026299)	Theileria orientalis strain Shintoku	20713352
TOT_010000441	mRNA	TOT_010000441	NC_025260.1	1026864	1029164	R	TOT_010000441	complement(<1026864..>1029164)	Theileria orientalis strain Shintoku	20713353
TOT_010000442	mRNA	TOT_010000442	NC_025260.1	1029702	1031467	R	TOT_010000442	complement(join(<1029702..1030995,1031400..>1031467))	Theileria orientalis strain Shintoku	20713354
TOT_010000443	mRNA	TOT_010000443	NC_025260.1	1031551	1032969	R	TOT_010000443	complement(<1031551..>1032969)	Theileria orientalis strain Shintoku	20713355
TOT_010000444	mRNA	TOT_010000444	NC_025260.1	1033528	1035633	R	TOT_010000444	complement(<1033528..>1035633)	Theileria orientalis strain Shintoku	20713356
TOT_010000445	mRNA	TOT_010000445	NC_025260.1	1036403	1038510	D	TOT_010000445	join(<1036403..1036408,1036753..1036862,1037381..1037832,1037879..>1038510)	Theileria orientalis strain Shintoku	20713357
TOT_010001262	mRNA	TOT_010001262	NC_025260.1	1039177	1039841	D	TOT_010001262	join(<1039177..1039284,1039317..1039404,1039492..>1039841)	Theileria orientalis strain Shintoku	20714061
TOT_010000447	mRNA	TOT_010000447	NC_025260.1	1040054	1040612	D	TOT_010000447	join(<1040054..1040288,1040392..>1040612)	Theileria orientalis strain Shintoku	20713358
TOT_010000448	mRNA	TOT_010000448	NC_025260.1	1040765	1042550	R	TOT_010000448	complement(join(<1040765..1041070,1041194..1041320,1041379..1041447,1041540..1041624,1041690..1041824,1041869..>1042550))	Theileria orientalis strain Shintoku	20713359
TOT_010000449	mRNA	TOT_010000449	NC_025260.1	1043297	1050012	D	TOT_010000449	join(<1043297..1043406,1043925..1044334,1044362..1045360,1046017..1046140,1046258..1046315,1046440..1046743,1046842..1047110,1047245..1047343,1047417..1047551,1047625..1048749,1048900..1048973,1049142..1049268,1049476..>1050012)	Theileria orientalis strain Shintoku	20713360
TOT_010000450	mRNA	TOT_010000450	NC_025260.1	1050155	1051123	R	TOT_010000450	complement(<1050155..>1051123)	Theileria orientalis strain Shintoku	20713361
TOT_010000451	mRNA	TOT_010000451	NC_025260.1	1051353	1052313	D	TOT_010000451	join(<1051353..1051509,1051549..1051629,1051811..1051977,1052065..>1052313)	Theileria orientalis strain Shintoku	20713362
TOT_010000452	mRNA	TOT_010000452	NC_025260.1	1052791	1056712	R	TOT_010000452	complement(join(<1052791..1053051,1053589..1054006,1054046..1054848,1054885..1055801,1056031..>1056712))	Theileria orientalis strain Shintoku	20713363
TOT_010000453	mRNA	TOT_010000453	NC_025260.1	1057125	1057699	D	TOT_010000453	join(<1057125..1057176,1057293..>1057699)	Theileria orientalis strain Shintoku	20713364
TOT_010000454	mRNA	TOT_010000454	NC_025260.1	1058280	1060795	R	TOT_010000454	complement(join(<1058280..1058660,1058859..1058946,1059098..1059324,1059532..1059897,1060014..1060126,1060168..1060708,1060748..>1060795))	Theileria orientalis strain Shintoku	20713365
TOT_010000455	mRNA	TOT_010000455	NC_025260.1	1061332	1062448	D	TOT_010000455	join(<1061332..1061373,1061404..1061478,1061508..1061654,1061726..1061939,1062087..1062141,1062286..>1062448)	Theileria orientalis strain Shintoku	20713366
TOT_010001263	mRNA	TOT_010001263	NC_025260.1	1064397	1073225	D	TOT_010001263	join(<1064397..1064777,1065591..1066372,1066814..1067669,1068102..1068279,1068574..1068937,1069757..1070275,1070552..1070978,1071966..1072770,1072912..>1073225)	Theileria orientalis strain Shintoku	20714062
TOT_010000457	mRNA	TOT_010000457	NC_025260.1	1074276	1075760	D	TOT_010000457	<1074276..>1075760	Theileria orientalis strain Shintoku	20713367
TOT_010000458	mRNA	TOT_010000458	NC_025260.1	1078087	1079574	D	TOT_010000458	<1078087..>1079574	Theileria orientalis strain Shintoku	20713368
TOT_010000459	mRNA	TOT_010000459	NC_025260.1	1080006	1080176	R	TOT_010000459	complement(join(<1080006..1080043,1080089..>1080176))	Theileria orientalis strain Shintoku	20713369
TOT_010000460	mRNA	TOT_010000460	NC_025260.1	1081389	1082072	D	TOT_010000460	join(<1081389..1081473,1081993..>1082072)	Theileria orientalis strain Shintoku	20713370
TOT_010000461	mRNA	TOT_010000461	NC_025260.1	1082140	1083009	D	TOT_010000461	<1082140..>1083009	Theileria orientalis strain Shintoku	20713371
TOT_010000462	mRNA	TOT_010000462	NC_025260.1	1083067	1083624	D	TOT_010000462	<1083067..>1083624	Theileria orientalis strain Shintoku	20713372
TOT_010000463	mRNA	TOT_010000463	NC_025260.1	1084253	1087462	R	TOT_010000463	complement(<1084253..>1087462)	Theileria orientalis strain Shintoku	20713373
TOT_010000464	mRNA	TOT_010000464	NC_025260.1	1088010	1088189	R	TOT_010000464	complement(<1088010..>1088189)	Theileria orientalis strain Shintoku	20713374
TOT_010000465	mRNA	TOT_010000465	NC_025260.1	1088531	1093111	R	TOT_010000465	complement(<1088531..>1093111)	Theileria orientalis strain Shintoku	20713375
TOT_010000466	mRNA	TOT_010000466	NC_025260.1	1094193	1094914	R	TOT_010000466	complement(join(<1094193..1094272,1094343..1094490,1094585..1094678,1094733..1094820,1094902..>1094914))	Theileria orientalis strain Shintoku	20713376
TOT_010000467	mRNA	TOT_010000467	NC_025260.1	1095083	1097056	D	TOT_010000467	join(<1095083..1096468,1096753..1096862,1096981..>1097056)	Theileria orientalis strain Shintoku	20713377
TOT_010000468	mRNA	TOT_010000468	NC_025260.1	1097592	1098518	R	TOT_010000468	complement(<1097592..>1098518)	Theileria orientalis strain Shintoku	20713378
TOT_010001264	mRNA	TOT_010001264	NC_025260.1	1098813	1102301	R	TOT_010001264	complement(join(<1098813..1099327,1099763..1100406,1100518..1100758,1100813..1101912,1101988..>1102301))	Theileria orientalis strain Shintoku	20714063
TOT_010000470	mRNA	TOT_010000470	NC_025260.1	1102600	1103475	D	TOT_010000470	join(<1102600..1102681,1102725..1102856,1102958..1103067,1103329..>1103475)	Theileria orientalis strain Shintoku	20713379
TOT_010000471	mRNA	TOT_010000471	NC_025260.1	1104457	1107074	D	TOT_010000471	join(<1104457..1105405,1105543..1105601,1105800..1106561,1106581..1106775,1106812..1106923,1106932..>1107074)	Theileria orientalis strain Shintoku	20713380
TOT_010000472	mRNA	TOT_010000472	NC_025260.1	1107115	1108262	D	TOT_010000472	join(<1107115..1107199,1107391..1107488,1107606..1107924,1107994..>1108262)	Theileria orientalis strain Shintoku	20713381
TOT_010000473	mRNA	TOT_010000473	NC_025260.1	1108867	1110223	D	TOT_010000473	join(<1108867..1108924,1109125..1109225,1109429..1109747,1109943..>1110223)	Theileria orientalis strain Shintoku	20713382
TOT_010000474	mRNA	TOT_010000474	NC_025260.1	1110614	1111851	D	TOT_010000474	join(<1110614..1110893,1111057..1111473,1111547..>1111851)	Theileria orientalis strain Shintoku	20713383
TOT_010000475	mRNA	TOT_010000475	NC_025260.1	1112108	1113323	D	TOT_010000475	join(<1112108..1112279,1112437..1112856,1113052..>1113323)	Theileria orientalis strain Shintoku	20713384
TOT_010000476	mRNA	TOT_010000476	NC_025260.1	1113577	1117777	R	TOT_010000476	complement(join(<1113577..1117613,1117741..>1117777))	Theileria orientalis strain Shintoku	20713385
TOT_010000477	mRNA	TOT_010000477	NC_025260.1	1118401	1119587	D	TOT_010000477	join(<1118401..1118767,1118844..1118951,1119103..>1119587)	Theileria orientalis strain Shintoku	20713386
TOT_010000478	mRNA	TOT_010000478	NC_025260.1	1120005	1121044	R	TOT_010000478	complement(join(<1120005..1120572,1120731..>1121044))	Theileria orientalis strain Shintoku	20713387
TOT_010000479	mRNA	TOT_010000479	NC_025260.1	1121256	1121582	D	TOT_010000479	join(<1121256..1121315,1121463..>1121582)	Theileria orientalis strain Shintoku	20713388
TOT_010000480	mRNA	TOT_010000480	NC_025260.1	1122140	1125107	D	TOT_010000480	join(<1122140..1124260,1124790..>1125107)	Theileria orientalis strain Shintoku	20713389
TOT_010000481	mRNA	TOT_010000481	NC_025260.1	1125497	1126498	D	TOT_010000481	join(<1125497..1125620,1125738..1125836,1125908..1126085,1126330..>1126498)	Theileria orientalis strain Shintoku	20713390
TOT_010000482	mRNA	TOT_010000482	NC_025260.1	1126685	1133498	D	TOT_010000482	join(<1126685..1126847,1127228..1128586,1128805..1129403,1129494..1129718,1130067..1130909,1132671..1133042,1133178..1133210,1133310..>1133498)	Theileria orientalis strain Shintoku	20713391
TOT_010000483	mRNA	TOT_010000483	NC_025260.1	1133936	1134707	R	TOT_010000483	complement(join(<1133936..1134211,1134324..>1134707))	Theileria orientalis strain Shintoku	20713392
TOT_010001265	mRNA	TOT_010001265	NC_025260.1	1135219	1136164	D	TOT_010001265	join(<1135219..1135797,1136051..>1136164)	Theileria orientalis strain Shintoku	20714064
TOT_010000485	mRNA	TOT_010000485	NC_025260.1	1136758	1140090	R	TOT_010000485	complement(<1136758..>1140090)	Theileria orientalis strain Shintoku	20713393
TOT_010001266	mRNA	TOT_010001266	NC_025260.1	1141292	1142670	R	TOT_010001266	complement(join(<1141292..1141477,1141622..1141782,1141878..1142011,1142099..>1142670))	Theileria orientalis strain Shintoku	20714065
TOT_010001267	mRNA	TOT_010001267	NC_025260.1	1142944	1143387	R	TOT_010001267	complement(<1142944..>1143387)	Theileria orientalis strain Shintoku	20714066
TOT_010000488	mRNA	TOT_010000488	NC_025260.1	1144018	1150119	D	TOT_010000488	join(<1144018..1144063,1144095..1144179,1144340..1144683,1144757..1145074,1145299..1145768,1145927..1146078,1146122..1146208,1146350..1146437,1146721..1146810,1146843..1146971,1147124..1147250,1147588..1147789,1148204..1148768,1149049..1149334,1149419..>1150119)	Theileria orientalis strain Shintoku	20713394
TOT_010000489	mRNA	TOT_010000489	NC_025260.1	1150280	1151181	R	TOT_010000489	complement(join(<1150280..1150942,1151164..>1151181))	Theileria orientalis strain Shintoku	20713395
TOT_010000490	mRNA	TOT_010000490	NC_025260.1	1152051	1153052	D	TOT_010000490	join(<1152051..1152165,1152293..1152459,1152681..>1153052)	Theileria orientalis strain Shintoku	20713396
TOT_010000491	mRNA	TOT_010000491	NC_025260.1	1153589	1154696	D	TOT_010000491	join(<1153589..1153634,1153733..1153814,1153874..1153923,1154185..1154256,1154305..>1154696)	Theileria orientalis strain Shintoku	20713397
TOT_010000492	mRNA	TOT_010000492	NC_025260.1	1154993	1158736	R	TOT_010000492	complement(<1154993..>1158736)	Theileria orientalis strain Shintoku	20713398
TOT_010000493	mRNA	TOT_010000493	NC_025260.1	1160064	1162142	D	TOT_010000493	join(<1160064..1161293,1161317..1162112,1162135..>1162142)	Theileria orientalis strain Shintoku	20713399
TOT_010000494	mRNA	TOT_010000494	NC_025260.1	1162263	1165730	R	TOT_010000494	complement(join(<1162263..1162596,1162656..1162726,1162842..1163044,1163183..1163284,1163423..1163528,1163767..1164173,1164397..1164551,1164689..1164948,1164999..1165122,1165298..1165407,1165448..1165537,1165611..>1165730))	Theileria orientalis strain Shintoku	20713400
TOT_010000495	mRNA	TOT_010000495	NC_025260.1	1166038	1166883	D	TOT_010000495	join(<1166038..1166185,1166266..1166448,1166571..1166747,1166816..>1166883)	Theileria orientalis strain Shintoku	20713401
TOT_010000496	mRNA	TOT_010000496	NC_025260.1	1166949	1169909	R	TOT_010000496	complement(join(<1166949..1166971,1167007..1167112,1167210..>1169909))	Theileria orientalis strain Shintoku	20713402
TOT_010001186	mRNA	TOT_010001186	NC_025260.1	1170173	1173435	D	TOT_010001186	join(<1170173..1170600,1170669..1170762,1170806..1170922,1170991..1171088,1171118..1171205,1171240..1171331,1171370..1171430,1171616..1171838,1171985..1172251,1172288..1172482,1172656..1172780,1172847..1173085,1173160..1173244,1173349..>1173435)	Theileria orientalis strain Shintoku	20713987
TOT_010001187	mRNA	TOT_010001187	NC_025260.1	1173610	1175866	D	TOT_010001187	join(<1173610..1173737,1173882..1174305,1174482..1174829,1175006..1175257,1175457..1175579,1175687..>1175866)	Theileria orientalis strain Shintoku	20713988
TOT_010001268	mRNA	TOT_010001268	NC_025260.1	1176141	1177048	D	TOT_010001268	join(<1176141..1176344,1176588..1176833,1176887..>1177048)	Theileria orientalis strain Shintoku	20714067
TOT_010000498	mRNA	TOT_010000498	NC_025260.1	1177160	1177865	D	TOT_010000498	join(<1177160..1177253,1177318..1177444,1177616..>1177865)	Theileria orientalis strain Shintoku	20713403
TOT_010000499	mRNA	TOT_010000499	NC_025260.1	1178077	1178391	D	TOT_010000499	join(<1178077..1178129,1178301..>1178391)	Theileria orientalis strain Shintoku	20713404
TOT_010000500	mRNA	TOT_010000500	NC_025260.1	1178532	1181789	D	TOT_010000500	join(<1178532..1180484,1180620..1180701,1180737..1181256,1181600..>1181789)	Theileria orientalis strain Shintoku	20713405
TOT_010000501	mRNA	TOT_010000501	NC_025260.1	1182332	1183936	R	TOT_010000501	complement(<1182332..>1183936)	Theileria orientalis strain Shintoku	20713406
TOT_010000502	mRNA	TOT_010000502	NC_025260.1	1184271	1185167	R	TOT_010000502	complement(join(<1184271..1184400,1185052..>1185167))	Theileria orientalis strain Shintoku	20713407
TOT_010000503	mRNA	TOT_010000503	NC_025260.1	1185233	1191398	R	TOT_010000503	complement(join(<1185233..1185330,1185355..1185497,1185642..1185892,1186080..1186310,1186505..1186634,1186870..1187104,1187251..1187310,1187506..1187715,1187774..1188011,1188498..1188554,1188677..1189713,1190186..1190581,1190699..1190750,1190807..1190934,1190988..1191138,1191312..>1191398))	Theileria orientalis strain Shintoku	20713408
TOT_010000504	mRNA	TOT_010000504	NC_025260.1	1191709	1193451	D	TOT_010000504	join(<1191709..1191845,1191915..1192120,1192292..1193059,1193147..>1193451)	Theileria orientalis strain Shintoku	20713409
TOT_010000505	mRNA	TOT_010000505	NC_025260.1	1194372	1195762	D	TOT_010000505	join(<1194372..1195507,1195657..>1195762)	Theileria orientalis strain Shintoku	20713410
TOT_010000506	mRNA	TOT_010000506	NC_025260.1	1196083	1197210	D	TOT_010000506	<1196083..>1197210	Theileria orientalis strain Shintoku	20713411
TOT_010001269	mRNA	TOT_010001269	NC_025260.1	1198660	1200402	D	TOT_010001269	join(<1198660..1199516,1199700..>1200402)	Theileria orientalis strain Shintoku	20714068
TOT_010000508	mRNA	TOT_010000508	NC_025260.1	1200697	1202151	R	TOT_010000508	complement(join(<1200697..1201277,1201566..1201860,1202068..>1202151))	Theileria orientalis strain Shintoku	20713412
TOT_010000509	mRNA	TOT_010000509	NC_025260.1	1202452	1204399	D	TOT_010000509	join(<1202452..1202669,1202805..1202979,1203170..>1204399)	Theileria orientalis strain Shintoku	20713413
TOT_010000510	mRNA	TOT_010000510	NC_025260.1	1204598	1205492	D	TOT_010000510	join(<1204598..1204627,1205133..>1205492)	Theileria orientalis strain Shintoku	20713414
TOT_010000511	mRNA	TOT_010000511	NC_025260.1	1205686	1206578	R	TOT_010000511	complement(join(<1205686..1205952,1206076..1206240,1206347..1206409,1206531..>1206578))	Theileria orientalis strain Shintoku	20713415
TOT_010000512	mRNA	TOT_010000512	NC_025260.1	1206680	1210908	D	TOT_010000512	join(<1206680..1206875,1207042..1207344,1207418..1208702,1209147..1209547,1209749..1210403,1210710..>1210908)	Theileria orientalis strain Shintoku	20713416
TOT_010000513	mRNA	TOT_010000513	NC_025260.1	1211060	1211176	R	TOT_010000513	complement(<1211060..>1211176)	Theileria orientalis strain Shintoku	20713417
TOT_010000514	mRNA	TOT_010000514	NC_025260.1	1211362	1212483	D	TOT_010000514	<1211362..>1212483	Theileria orientalis strain Shintoku	20713418
TOT_010000515	mRNA	TOT_010000515	NC_025260.1	1212493	1212606	R	TOT_010000515	complement(<1212493..>1212606)	Theileria orientalis strain Shintoku	20713419
TOT_010000516	mRNA	TOT_010000516	NC_025260.1	1213113	1217460	D	TOT_010000516	join(<1213113..1215325,1215525..1216846,1216964..1217373,1217437..>1217460)	Theileria orientalis strain Shintoku	20713420
TOT_010000517	mRNA	TOT_010000517	NC_025260.1	1217832	1220048	R	TOT_010000517	complement(join(<1217832..1219089,1219210..>1220048))	Theileria orientalis strain Shintoku	20713421
TOT_010000518	mRNA	TOT_010000518	NC_025260.1	1221353	1222504	R	TOT_010000518	complement(join(<1221353..1222321,1222469..>1222504))	Theileria orientalis strain Shintoku	20713422
TOT_010000519	mRNA	TOT_010000519	NC_025260.1	1223066	1224616	D	TOT_010000519	join(<1223066..1223737,1224029..>1224616)	Theileria orientalis strain Shintoku	20713423
TOT_010000520	mRNA	TOT_010000520	NC_025260.1	1225196	1226329	R	TOT_010000520	complement(<1225196..>1226329)	Theileria orientalis strain Shintoku	20713424
TOT_010000521	mRNA	TOT_010000521	NC_025260.1	1227062	1228489	R	TOT_010000521	complement(<1227062..>1228489)	Theileria orientalis strain Shintoku	20713425
TOT_010000522	mRNA	TOT_010000522	NC_025260.1	1229271	1230196	R	TOT_010000522	complement(join(<1229271..1229471,1229492..1230111,1230193..>1230196))	Theileria orientalis strain Shintoku	20713426
TOT_010000523	mRNA	TOT_010000523	NC_025260.1	1230654	1234111	D	TOT_010000523	join(<1230654..1230761,1231084..1233943,1234026..>1234111)	Theileria orientalis strain Shintoku	20713427
TOT_010000524	mRNA	TOT_010000524	NC_025260.1	1234650	1235297	D	TOT_010000524	join(<1234650..1235057,1235121..>1235297)	Theileria orientalis strain Shintoku	20713428
TOT_010001270	mRNA	TOT_010001270	NC_025260.1	1236352	1238142	R	TOT_010001270	complement(join(<1236352..1236462,1236564..1236906,1237091..1237162,1237218..1237300,1237395..1237465,1237857..1237932,1238026..>1238142))	Theileria orientalis strain Shintoku	20714069
TOT_010000526	mRNA	TOT_010000526	NC_025260.1	1240151	1241694	D	TOT_010000526	join(<1240151..1240208,1240340..1240652,1240754..1240802,1240994..1241126,1241270..>1241694)	Theileria orientalis strain Shintoku	20713429
TOT_010000527	mRNA	TOT_010000527	NC_025260.1	1242119	1243264	D	TOT_010000527	join(<1242119..1242874,1243025..>1243264)	Theileria orientalis strain Shintoku	20713430
TOT_010000528	mRNA	TOT_010000528	NC_025260.1	1243397	1244892	R	TOT_010000528	complement(join(<1243397..1243574,1243911..1243994,1244068..1244133,1244468..>1244892))	Theileria orientalis strain Shintoku	20713431
TOT_010000529	mRNA	TOT_010000529	NC_025260.1	1245160	1245642	D	TOT_010000529	join(<1245160..1245275,1245283..1245480,1245597..>1245642)	Theileria orientalis strain Shintoku	20713432
TOT_010000530	mRNA	TOT_010000530	NC_025260.1	1245769	1246924	R	TOT_010000530	complement(join(<1245769..1245996,1246082..1246189,1246221..1246252,1246329..1246465,1246471..1246542,1246611..1246705,1246805..>1246924))	Theileria orientalis strain Shintoku	20713433
TOT_010000531	mRNA	TOT_010000531	NC_025260.1	1247250	1248487	R	TOT_010000531	complement(join(<1247250..1247360,1247392..1247511,1247634..1247815,1247913..1248086,1248181..>1248487))	Theileria orientalis strain Shintoku	20713434
TOT_010000532	mRNA	TOT_010000532	NC_025260.1	1249842	1252301	R	TOT_010000532	complement(<1249842..>1252301)	Theileria orientalis strain Shintoku	20713435
TOT_010000533	mRNA	TOT_010000533	NC_025260.1	1253720	1254176	D	TOT_010000533	join(<1253720..1253977,1254072..>1254176)	Theileria orientalis strain Shintoku	20713436
TOT_010000534	mRNA	TOT_010000534	NC_025260.1	1254408	1261393	R	TOT_010000534	complement(join(<1254408..1254544,1254741..1254989,1255091..1255131,1255755..1260954,1261330..>1261393))	Theileria orientalis strain Shintoku	20713437
TOT_010001271	mRNA	TOT_010001271	NC_025260.1	1261968	1273831	R	TOT_010001271	complement(join(<1261968..1262079,1262362..1266462,1267208..1267265,1268426..1268514,1268976..1269484,1269734..1270362,1270636..1271108,1271325..1271951,1272105..1272388,1272524..1273344,1273440..1273552,1273687..1273765,1273798..>1273831))	Theileria orientalis strain Shintoku	20714070
TOT_010000535	mRNA	TOT_010000535	NC_025260.1	1267917	1268528	D	TOT_010000535	join(<1267917..1267978,1268173..1268238,1268420..>1268528)	Theileria orientalis strain Shintoku	20713438
TOT_010000536	mRNA	TOT_010000536	NC_025260.1	1274303	1276218	D	TOT_010000536	join(<1274303..1274418,1274471..1274596,1274627..1274701,1274747..1274900,1274947..1275027,1275135..1275295,1275360..1275488,1275620..1275847,1275955..1276050,1276068..>1276218)	Theileria orientalis strain Shintoku	20713439
TOT_010001272	mRNA	TOT_010001272	NC_025260.1	1276459	1277545	D	TOT_010001272	join(<1276459..1276541,1276577..1276935,1277006..1277215,1277376..>1277545)	Theileria orientalis strain Shintoku	20714071
TOT_010000538	mRNA	TOT_010000538	NC_025260.1	1277634	1280613	D	TOT_010000538	join(<1277634..1277698,1277999..1278667,1278917..1279604,1279670..1280103,1280122..1280172,1280292..>1280613)	Theileria orientalis strain Shintoku	20713440
TOT_010000539	mRNA	TOT_010000539	NC_025260.1	1280740	1282980	R	TOT_010000539	complement(join(<1280740..1280920,1280960..1281822,1281880..>1282980))	Theileria orientalis strain Shintoku	20713441
TOT_010000540	mRNA	TOT_010000540	NC_025260.1	1283712	1285209	D	TOT_010000540	join(<1283712..1285082,1285110..1285154,1285183..>1285209)	Theileria orientalis strain Shintoku	20713442
TOT_010000541	mRNA	TOT_010000541	NC_025260.1	1285319	1285737	R	TOT_010000541	complement(join(<1285319..1285538,1285571..>1285737))	Theileria orientalis strain Shintoku	20713443
TOT_010000542	mRNA	TOT_010000542	NC_025260.1	1285947	1290381	D	TOT_010000542	join(<1285947..1286398,1286554..1288879,1289021..1289616,1290156..>1290381)	Theileria orientalis strain Shintoku	20713444
TOT_010000543	mRNA	TOT_010000543	NC_025260.1	1290535	1299951	R	TOT_010000543	complement(join(<1290535..1291566,1291591..1294625,1294653..1295252,1295271..1298234,1298250..>1299951))	Theileria orientalis strain Shintoku	20713445
TOT_010000544	mRNA	TOT_010000544	NC_025260.1	1301223	1302059	R	TOT_010000544	complement(<1301223..>1302059)	Theileria orientalis strain Shintoku	20713446
TOT_010000545	mRNA	TOT_010000545	NC_025260.1	1302844	1303308	R	TOT_010000545	complement(join(<1302844..1303009,1303039..1303161,1303193..1303243,1303268..>1303308))	Theileria orientalis strain Shintoku	20713447
TOT_010000546	mRNA	TOT_010000546	NC_025260.1	1304512	1306637	D	TOT_010000546	join(<1304512..1304583,1304692..1304769,1304853..1304982,1305104..1305229,1305268..>1306637)	Theileria orientalis strain Shintoku	20713448
TOT_010000547	mRNA	TOT_010000547	NC_025260.1	1306678	1312178	R	TOT_010000547	complement(join(<1306678..1306824,1307278..1308587,1309461..1312026,1312059..>1312178))	Theileria orientalis strain Shintoku	20713449
TOT_010000548	mRNA	TOT_010000548	NC_025260.1	1312846	1313216	D	TOT_010000548	join(<1312846..1312889,1313006..>1313216)	Theileria orientalis strain Shintoku	20713450
TOT_010000549	mRNA	TOT_010000549	NC_025260.1	1314560	1315387	R	TOT_010000549	complement(<1314560..>1315387)	Theileria orientalis strain Shintoku	20713451
TOT_010001273	mRNA	TOT_010001273	NC_025260.1	1317412	1318821	R	TOT_010001273	complement(<1317412..>1318821)	Theileria orientalis strain Shintoku	20714072
TOT_010000551	mRNA	TOT_010000551	NC_025260.1	1320480	1322192	R	TOT_010000551	complement(<1320480..>1322192)	Theileria orientalis strain Shintoku	20713452
TOT_010000552	mRNA	TOT_010000552	NC_025260.1	1322913	1323803	D	TOT_010000552	join(<1322913..1323130,1323162..1323248,1323522..1323592,1323624..1323748,1323780..>1323803)	Theileria orientalis strain Shintoku	20713453
TOT_010000553	mRNA	TOT_010000553	NC_025260.1	1323984	1325278	R	TOT_010000553	complement(join(<1323984..1324045,1324102..1324260,1324369..1324660,1324739..1324840,1324900..1325013,1325101..1325183,1325218..>1325278))	Theileria orientalis strain Shintoku	20713454
TOT_010000554	mRNA	TOT_010000554	NC_025260.1	1326651	1335473	D	TOT_010000554	join(<1326651..1326959,1327087..1327234,1327503..1327902,1327934..1328092,1328425..1328702,1329127..1329821,1329876..1330123,1330184..1331066,1331475..1331685,1331949..1332404,1332694..1332818,1333094..1333159,1333233..1333506,1333800..1334356,1334616..1334645,1334679..1334832,1335169..1335328,1335359..>1335473)	Theileria orientalis strain Shintoku	20713455
TOT_010000555	mRNA	TOT_010000555	NC_025260.1	1335848	1340191	D	TOT_010000555	<1335848..>1340191	Theileria orientalis strain Shintoku	20713456
TOT_010000556	mRNA	TOT_010000556	NC_025260.1	1341172	1341770	D	TOT_010000556	join(<1341172..1341269,1341372..1341525,1341561..1341689,1341714..>1341770)	Theileria orientalis strain Shintoku	20713457
TOT_010000557	mRNA	TOT_010000557	NC_025260.1	1341917	1342746	D	TOT_010000557	join(<1341917..1342016,1342033..1342157,1342230..1342344,1342445..>1342746)	Theileria orientalis strain Shintoku	20713458
TOT_010000558	mRNA	TOT_010000558	NC_025260.1	1344933	1345472	D	TOT_010000558	<1344933..>1345472	Theileria orientalis strain Shintoku	20713459
TOT_010000559	mRNA	TOT_010000559	NC_025260.1	1345962	1347353	R	TOT_010000559	complement(<1345962..>1347353)	Theileria orientalis strain Shintoku	20713460
TOT_010001274	mRNA	TOT_010001274	NC_025260.1	1347728	1347925	R	TOT_010001274	complement(join(<1347728..1347811,1347842..>1347925))	Theileria orientalis strain Shintoku	20714073
TOT_010001275	mRNA	TOT_010001275	NC_025260.1	1348071	1349430	R	TOT_010001275	complement(join(<1348071..1348172,1348197..1348420,1348558..1348857,1348921..1349226,1349262..>1349430))	Theileria orientalis strain Shintoku	20714074
TOT_010000562	mRNA	TOT_010000562	NC_025260.1	1349838	1350102	R	TOT_010000562	complement(join(<1349838..1349995,1350027..>1350102))	Theileria orientalis strain Shintoku	20713461
TOT_010000563	mRNA	TOT_010000563	NC_025260.1	1350281	1353726	D	TOT_010000563	join(<1350281..1350394,1350518..1350737,1350952..1351154,1351368..1352097,1352224..1352678,1352885..1353348,1353378..>1353726)	Theileria orientalis strain Shintoku	20713462
TOT_010000564	mRNA	TOT_010000564	NC_025260.1	1355762	1360183	D	TOT_010000564	join(<1355762..1356396,1356547..1356556,1356719..1357347,1357471..1357744,1357969..1358571,1358819..1359231,1359616..>1360183)	Theileria orientalis strain Shintoku	20713463
TOT_010000565	mRNA	TOT_010000565	NC_025260.1	1361267	1361698	D	TOT_010000565	join(<1361267..1361335,1361420..1361527,1361630..>1361698)	Theileria orientalis strain Shintoku	20713464
TOT_010000566	mRNA	TOT_010000566	NC_025260.1	1362508	1363170	R	TOT_010000566	complement(join(<1362508..1362642,1362838..>1363170))	Theileria orientalis strain Shintoku	20713465
TOT_010000567	mRNA	TOT_010000567	NC_025260.1	1363902	1366574	D	TOT_010000567	join(<1363902..1363936,1364034..1364088,1364193..1364291,1364373..1364474,1364593..1364784,1364882..1365160,1365442..1366281,1366512..>1366574)	Theileria orientalis strain Shintoku	20713466
TOT_010000568	mRNA	TOT_010000568	NC_025260.1	1367170	1371306	D	TOT_010000568	join(<1367170..1367682,1367905..1368087,1368256..1369356,1369431..1369441,1369527..1369878,1370044..1370242,1370362..1370555,1370819..1370935,1371036..1371164,1371205..>1371306)	Theileria orientalis strain Shintoku	20713467
TOT_010000569	mRNA	TOT_010000569	NC_025260.1	1371694	1374916	R	TOT_010000569	complement(join(<1371694..1371784,1371819..1371889,1372131..1372989,1373150..1373596,1374035..1374107,1374295..1374491,1374530..1374685,1374864..>1374916))	Theileria orientalis strain Shintoku	20713468
TOT_010000570	mRNA	TOT_010000570	NC_025260.1	1376108	1376496	R	TOT_010000570	complement(join(<1376108..1376392,1376422..>1376496))	Theileria orientalis strain Shintoku	20713469
TOT_010000571	mRNA	TOT_010000571	NC_025260.1	1376529	1379966	D	TOT_010000571	join(<1376529..1377072,1377172..>1379966)	Theileria orientalis strain Shintoku	20713470
TOT_010000572	mRNA	TOT_010000572	NC_025260.1	1381338	1384247	D	TOT_010000572	join(<1381338..1383903,1383982..1384146,1384210..>1384247)	Theileria orientalis strain Shintoku	20713471
TOT_010000573	mRNA	TOT_010000573	NC_025260.1	1384359	1386038	R	TOT_010000573	complement(join(<1384359..1384509,1384539..1385193,1385352..1385494,1385568..1385814,1385927..>1386038))	Theileria orientalis strain Shintoku	20713472
TOT_010000574	mRNA	TOT_010000574	NC_025260.1	1386163	1386501	R	TOT_010000574	complement(<1386163..>1386501)	Theileria orientalis strain Shintoku	20713473
TOT_010001276	mRNA	TOT_010001276	NC_025260.1	1388355	1389531	D	TOT_010001276	join(<1388355..1388812,1388987..1389074,1389152..1389217,1389409..>1389531)	Theileria orientalis strain Shintoku	20714075
TOT_010000576	mRNA	TOT_010000576	NC_025260.1	1389734	1397944	R	TOT_010000576	complement(join(<1389734..1390031,1390336..1391197,1391240..1391389,1391501..1391811,1392187..1393045,1393181..1393444,1393865..1397883,1397904..>1397944))	Theileria orientalis strain Shintoku	20713474
TOT_010000577	mRNA	TOT_010000577	NC_025260.1	1398614	1399924	R	TOT_010000577	complement(join(<1398614..1398768,1399034..1399237,1399273..1399467,1399648..>1399924))	Theileria orientalis strain Shintoku	20713475
TOT_010000578	mRNA	TOT_010000578	NC_025260.1	1400318	1403074	D	TOT_010000578	join(<1400318..1402432,1402697..>1403074)	Theileria orientalis strain Shintoku	20713476
TOT_010000579	mRNA	TOT_010000579	NC_025260.1	1403743	1406343	R	TOT_010000579	complement(<1403743..>1406343)	Theileria orientalis strain Shintoku	20713477
TOT_010000580	mRNA	TOT_010000580	NC_025260.1	1407395	1407715	R	TOT_010000580	complement(<1407395..>1407715)	Theileria orientalis strain Shintoku	20713478
TOT_010000581	mRNA	TOT_010000581	NC_025260.1	1408116	1409735	D	TOT_010000581	join(<1408116..1408289,1408470..1408823,1409046..1409292,1409431..1409573,1409676..>1409735)	Theileria orientalis strain Shintoku	20713479
TOT_010000582	mRNA	TOT_010000582	NC_025260.1	1409804	1411115	R	TOT_010000582	complement(join(<1409804..1409836,1409886..1410218,1410341..1410481,1410784..1410888,1410996..>1411115))	Theileria orientalis strain Shintoku	20713480
TOT_010000583	mRNA	TOT_010000583	NC_025260.1	1411606	1412856	D	TOT_010000583	join(<1411606..1411746,1411778..1411902,1412031..1412132,1412332..1412511,1412577..1412635,1412669..>1412856)	Theileria orientalis strain Shintoku	20713481
TOT_010000584	mRNA	TOT_010000584	NC_025260.1	1413017	1415352	R	TOT_010000584	complement(join(<1413017..1413116,1413439..1413601,1413660..1413723,1413835..1413917,1414127..1414212,1414266..1414345,1414403..1414576,1414720..1414953,1415038..>1415352))	Theileria orientalis strain Shintoku	20713482
TOT_010001188	mRNA	TOT_010001188	NC_025260.1	1415442	1415862	D	TOT_010001188	join(<1415442..1415745,1415810..>1415862)	Theileria orientalis strain Shintoku	20713989
TOT_010000585	mRNA	TOT_010000585	NC_025260.1	1416514	1417299	D	TOT_010000585	join(<1416514..1416607,1416658..1416722,1416786..1416855,1416898..1417035,1417133..1417214,1417290..>1417299)	Theileria orientalis strain Shintoku	20713483
TOT_010000586	mRNA	TOT_010000586	NC_025260.1	1417421	1418951	D	TOT_010000586	join(<1417421..1417626,1417680..1417787,1417960..1417998,1418063..1418175,1418612..1418688,1418856..>1418951)	Theileria orientalis strain Shintoku	20713484
TOT_010000587	mRNA	TOT_010000587	NC_025260.1	1419275	1423096	R	TOT_010000587	complement(join(<1419275..1420116,1420430..1420627,1420691..1420908,1421101..1421280,1421499..1422183,1422277..>1423096))	Theileria orientalis strain Shintoku	20713485
TOT_010001277	mRNA	TOT_010001277	NC_025260.1	1423424	1424284	D	TOT_010001277	join(<1423424..1423465,1423500..1423535,1423647..1423748,1423832..1423908,1424014..1424132,1424232..>1424284)	Theileria orientalis strain Shintoku	20714076
TOT_010000589	mRNA	TOT_010000589	NC_025260.1	1424583	1425350	D	TOT_010000589	<1424583..>1425350	Theileria orientalis strain Shintoku	20713486
TOT_010000590	mRNA	TOT_010000590	NC_025260.1	1426674	1427575	D	TOT_010000590	join(<1426674..1426971,1427200..1427370,1427400..>1427575)	Theileria orientalis strain Shintoku	20713487
TOT_010000591	mRNA	TOT_010000591	NC_025260.1	1427868	1430902	R	TOT_010000591	complement(join(<1427868..1428342,1428462..1428523,1428660..1428762,1428939..1429144,1429336..1429477,1429630..1429687,1429764..1429914,1430023..1430088,1430153..1430224,1430293..1430490,1430532..1430651,1430708..>1430902))	Theileria orientalis strain Shintoku	20713488
TOT_010000592	mRNA	TOT_010000592	NC_025260.1	1431382	1433899	R	TOT_010000592	complement(join(<1431382..1433281,1433351..1433528,1433635..>1433899))	Theileria orientalis strain Shintoku	20713489
TOT_010000593	mRNA	TOT_010000593	NC_025260.1	1435055	1436733	D	TOT_010000593	join(<1435055..1435358,1435418..1435789,1435857..1436178,1436289..>1436733)	Theileria orientalis strain Shintoku	20713490
TOT_010000594	mRNA	TOT_010000594	NC_025260.1	1437599	1441363	D	TOT_010000594	join(<1437599..1438220,1438368..1439570,1439786..1440258,1440638..>1441363)	Theileria orientalis strain Shintoku	20713491
TOT_010000595	mRNA	TOT_010000595	NC_025260.1	1441738	1442235	D	TOT_010000595	<1441738..>1442235	Theileria orientalis strain Shintoku	20713492
TOT_010000596	mRNA	TOT_010000596	NC_025260.1	1442490	1443799	D	TOT_010000596	join(<1442490..1442626,1442713..1443018,1443312..1443444,1443515..>1443799)	Theileria orientalis strain Shintoku	20713493
TOT_010000597	mRNA	TOT_010000597	NC_025260.1	1443989	1445593	R	TOT_010000597	complement(join(<1443989..1444057,1444089..1444158,1444206..1444264,1444568..1444662,1444760..1445023,1445116..>1445593))	Theileria orientalis strain Shintoku	20713494
TOT_010000598	mRNA	TOT_010000598	NC_025260.1	1445894	1446530	D	TOT_010000598	join(<1445894..1446306,1446392..>1446530)	Theileria orientalis strain Shintoku	20713495
TOT_010000599	mRNA	TOT_010000599	NC_025260.1	1446939	1448381	D	TOT_010000599	join(<1446939..1447056,1447246..1447388,1447469..1447601,1447784..1447929,1448027..1448122,1448235..>1448381)	Theileria orientalis strain Shintoku	20713496
TOT_010000600	mRNA	TOT_010000600	NC_025260.1	1448725	1449399	D	TOT_010000600	<1448725..>1449399	Theileria orientalis strain Shintoku	20713497
TOT_010000601	mRNA	TOT_010000601	NC_025260.1	1449790	1450336	D	TOT_010000601	join(<1449790..1449864,1450091..>1450336)	Theileria orientalis strain Shintoku	20713498
TOT_010000602	mRNA	TOT_010000602	NC_025260.1	1451849	1452565	R	TOT_010000602	complement(<1451849..>1452565)	Theileria orientalis strain Shintoku	20713499
TOT_010000603	mRNA	TOT_010000603	NC_025260.1	1452794	1457407	D	TOT_010000603	join(<1452794..1452931,1453064..1453156,1453211..1453381,1453476..1453625,1453696..1453774,1453866..1453939,1454078..1454149,1454250..1454323,1454721..1455032,1455067..>1457407)	Theileria orientalis strain Shintoku	20713500
TOT_010000604	mRNA	TOT_010000604	NC_025260.1	1458065	1459362	D	TOT_010000604	join(<1458065..1458662,1458800..>1459362)	Theileria orientalis strain Shintoku	20713501
TOT_010000605	mRNA	TOT_010000605	NC_025260.1	1459460	1463389	D	TOT_010000605	join(<1459460..1460762,1460805..1460936,1461132..1461304,1461503..1462190,1462275..1462530,1462738..>1463389)	Theileria orientalis strain Shintoku	20713502
TOT_010000606	mRNA	TOT_010000606	NC_025260.1	1463596	1464387	R	TOT_010000606	complement(<1463596..>1464387)	Theileria orientalis strain Shintoku	20713503
TOT_010000607	mRNA	TOT_010000607	NC_025260.1	1464707	1465807	D	TOT_010000607	join(<1464707..1465081,1465155..1465542,1465575..>1465807)	Theileria orientalis strain Shintoku	20713504
TOT_010000608	mRNA	TOT_010000608	NC_025260.1	1465818	1466240	R	TOT_010000608	complement(join(<1465818..1465950,1465959..1466072,1466077..>1466240))	Theileria orientalis strain Shintoku	20713505
TOT_010000609	mRNA	TOT_010000609	NC_025260.1	1466590	1469952	D	TOT_010000609	<1466590..>1469952	Theileria orientalis strain Shintoku	20713506
TOT_010000610	mRNA	TOT_010000610	NC_025260.1	1471478	1471609	R	TOT_010000610	complement(<1471478..>1471609)	Theileria orientalis strain Shintoku	20713507
TOT_010000611	mRNA	TOT_010000611	NC_025260.1	1471746	1475681	D	TOT_010000611	<1471746..>1475681	Theileria orientalis strain Shintoku	20713508
TOT_010000612	mRNA	TOT_010000612	NC_025260.1	1476439	1480992	D	TOT_010000612	join(<1476439..1476491,1476630..>1480992)	Theileria orientalis strain Shintoku	20713509
TOT_010000613	mRNA	TOT_010000613	NC_025260.1	1481601	1482204	D	TOT_010000613	join(<1481601..1482124,1482174..>1482204)	Theileria orientalis strain Shintoku	20713510
TOT_010000614	mRNA	TOT_010000614	NC_025260.1	1482424	1483599	R	TOT_010000614	complement(<1482424..>1483599)	Theileria orientalis strain Shintoku	20713511
TOT_010000615	mRNA	TOT_010000615	NC_025260.1	1484319	1485842	D	TOT_010000615	<1484319..>1485842	Theileria orientalis strain Shintoku	20713512
TOT_010001278	mRNA	TOT_010001278	NC_025260.1	1486349	1488820	D	TOT_010001278	join(<1486349..1486400,1486463..1488027,1488272..1488354,1488454..>1488820)	Theileria orientalis strain Shintoku	20714077
TOT_010000617	mRNA	TOT_010000617	NC_025260.1	1489274	1495786	R	TOT_010000617	complement(join(<1489274..1491589,1492262..1493622,1493746..1493900,1494237..1494721,1495091..>1495786))	Theileria orientalis strain Shintoku	20713513
TOT_010000618	mRNA	TOT_010000618	NC_025260.1	1496334	1498277	D	TOT_010000618	join(<1496334..1496492,1496559..1496872,1496954..1497083,1497162..1497246,1497710..1497897,1497998..1498104,1498163..>1498277)	Theileria orientalis strain Shintoku	20713514
TOT_010000619	mRNA	TOT_010000619	NC_025260.1	1499160	1500994	D	TOT_010000619	join(<1499160..1499472,1499501..1499832,1500045..1500159,1500303..>1500994)	Theileria orientalis strain Shintoku	20713515
TOT_010000620	mRNA	TOT_010000620	NC_025260.1	1501367	1502599	R	TOT_010000620	complement(join(<1501367..1501485,1501603..1501743,1501961..1502097,1502181..1502280,1502343..1502444,1502488..>1502599))	Theileria orientalis strain Shintoku	20713516
TOT_010000621	mRNA	TOT_010000621	NC_025260.1	1502995	1506511	D	TOT_010000621	join(<1502995..1503058,1503138..1503256,1503349..1504073,1504109..1504178,1504242..1504560,1504703..1504849,1504951..1505105,1505190..1505311,1505483..1505554,1505630..1505714,1505796..1505993,1506070..1506279,1506330..1506405,1506456..>1506511)	Theileria orientalis strain Shintoku	20713517
TOT_010000622	mRNA	TOT_010000622	NC_025260.1	1506973	1514772	D	TOT_010000622	join(<1506973..1507678,1507733..1507793,1507839..1509162,1509262..1511479,1511963..1512517,1512645..1512735,1512958..1514026,1514078..1514428,1514641..>1514772)	Theileria orientalis strain Shintoku	20713518
TOT_010000623	mRNA	TOT_010000623	NC_025260.1	1515254	1518338	D	TOT_010000623	join(<1515254..1515631,1515715..1516125,1516158..1516404,1516509..1516614,1516737..1516942,1517089..1517389,1517468..1517558,1517787..>1518338)	Theileria orientalis strain Shintoku	20713519
TOT_010000624	mRNA	TOT_010000624	NC_025260.1	1519478	1519945	D	TOT_010000624	<1519478..>1519945	Theileria orientalis strain Shintoku	20713520
TOT_010001279	mRNA	TOT_010001279	NC_025260.1	1520627	1525237	R	TOT_010001279	complement(join(<1520627..1522049,1522431..1522642,1522778..1522944,1523005..1523748,1523857..>1525237))	Theileria orientalis strain Shintoku	20714078
TOT_010000626	mRNA	TOT_010000626	NC_025260.1	1526141	1527740	D	TOT_010000626	join(<1526141..1526995,1527028..1527386,1527446..1527544,1527617..>1527740)	Theileria orientalis strain Shintoku	20713521
TOT_010000627	mRNA	TOT_010000627	NC_025260.1	1528181	1530364	D	TOT_010000627	join(<1528181..1528981,1529084..>1530364)	Theileria orientalis strain Shintoku	20713522
TOT_010000628	mRNA	TOT_010000628	NC_025260.1	1530610	1531398	D	TOT_010000628	join(<1530610..1530715,1530857..>1531398)	Theileria orientalis strain Shintoku	20713523
TOT_010000629	mRNA	TOT_010000629	NC_025260.1	1531697	1533307	R	TOT_010000629	complement(join(<1531697..1533069,1533163..>1533307))	Theileria orientalis strain Shintoku	20713524
TOT_010000630	mRNA	TOT_010000630	NC_025260.1	1533531	1536221	R	TOT_010000630	complement(join(<1533531..1533662,1533703..1533920,1533960..1534050,1534088..1534200,1534291..1534507,1534608..1534685,1534775..1534872,1534909..1535026,1535060..1535134,1535217..1535309,1535358..1535442,1535517..1535618,1535730..1535836,1535866..1536039,1536105..>1536221))	Theileria orientalis strain Shintoku	20713525
TOT_010000631	mRNA	TOT_010000631	NC_025260.1	1536468	1537793	R	TOT_010000631	complement(<1536468..>1537793)	Theileria orientalis strain Shintoku	20713526
TOT_010000632	mRNA	TOT_010000632	NC_025260.1	1538193	1540112	R	TOT_010000632	complement(join(<1538193..1538447,1538521..1538824,1538985..1539195,1539321..1539430,1539479..1539531,1539570..1539748,1539813..1539894,1540050..>1540112))	Theileria orientalis strain Shintoku	20713527
TOT_010000633	mRNA	TOT_010000633	NC_025260.1	1540385	1543351	D	TOT_010000633	join(<1540385..1540511,1540547..1540623,1540654..1541659,1541691..1541983,1542140..1542934,1543159..1543288,1543326..>1543351)	Theileria orientalis strain Shintoku	20713528
TOT_010001280	mRNA	TOT_010001280	NC_025260.1	1543663	1547559	R	TOT_010001280	complement(join(<1543663..1544668,1544927..1545207,1545286..1545820,1545932..1546211,1546347..>1547559))	Theileria orientalis strain Shintoku	20714079
TOT_010000635	mRNA	TOT_010000635	NC_025260.1	1548310	1550847	D	TOT_010000635	join(<1548310..1549240,1549415..1549624,1549730..1550475,1550548..>1550847)	Theileria orientalis strain Shintoku	20713529
TOT_010000636	mRNA	TOT_010000636	NC_025260.1	1551081	1553621	D	TOT_010000636	join(<1551081..1551219,1551259..1551329,1551367..1551454,1551484..1551591,1551677..1551777,1551836..1551991,1552124..1552369,1552443..1552559,1552776..1552952,1553060..1553365,1553511..>1553621)	Theileria orientalis strain Shintoku	20713530
TOT_010000637	mRNA	TOT_010000637	NC_025260.1	1554834	1556758	R	TOT_010000637	complement(join(<1554834..1555163,1555454..1555735,1555922..1555963,1556072..1556158,1556246..1556342,1556501..1556649,1556690..>1556758))	Theileria orientalis strain Shintoku	20713531
TOT_010000638	mRNA	TOT_010000638	NC_025260.1	1557424	1558901	R	TOT_010000638	complement(join(<1557424..1557750,1557938..1557989,1558104..1558342,1558454..1558501,1558534..1558639,1558693..>1558901))	Theileria orientalis strain Shintoku	20713532
TOT_010001281	mRNA	TOT_010001281	NC_025260.1	1559222	1561624	R	TOT_010001281	complement(<1559222..>1561624)	Theileria orientalis strain Shintoku	20714080
TOT_010001282	mRNA	TOT_010001282	NC_025260.1	1562909	1564792	R	TOT_010001282	complement(<1562909..>1564792)	Theileria orientalis strain Shintoku	20714081
TOT_010000641	mRNA	TOT_010000641	NC_025260.1	1565633	1567594	R	TOT_010000641	complement(<1565633..>1567594)	Theileria orientalis strain Shintoku	20713533
TOT_010000642	mRNA	TOT_010000642	NC_025260.1	1568204	1568931	R	TOT_010000642	complement(join(<1568204..1568270,1568368..1568417,1568449..1568580,1568686..1568727,1568770..>1568931))	Theileria orientalis strain Shintoku	20713534
TOT_010000643	mRNA	TOT_010000643	NC_025260.1	1569341	1574919	D	TOT_010000643	join(<1569341..1569493,1569526..1569705,1569770..1570063,1570455..1570524,1570558..1570640,1570742..1571131,1571203..1571343,1571412..1571509,1571585..1571755,1571871..1572717,1572813..1572904,1573021..1573418,1573490..1573819,1573964..>1574919)	Theileria orientalis strain Shintoku	20713535
TOT_010000644	mRNA	TOT_010000644	NC_025260.1	1575515	1576994	D	TOT_010000644	join(<1575515..1575999,1576199..1576309,1576538..>1576994)	Theileria orientalis strain Shintoku	20713536
TOT_010000645	mRNA	TOT_010000645	NC_025260.1	1577317	1578497	D	TOT_010000645	join(<1577317..1577787,1577899..1578117,1578369..>1578497)	Theileria orientalis strain Shintoku	20713537
TOT_010001283	mRNA	TOT_010001283	NC_025260.1	1579001	1580345	D	TOT_010001283	join(<1579001..1579279,1579377..1579494,1579560..1579659,1579728..1579875,1580003..1580077,1580196..>1580345)	Theileria orientalis strain Shintoku	20714082
TOT_010001190	mRNA	TOT_010001190	NC_025260.1	1580712	1586429	D	TOT_010001190	join(<1580712..1580831,1580946..1581029,1581119..1581217,1581303..1582362,1582447..1584768,1584907..1585854,1585981..1586161,1586243..>1586429)	Theileria orientalis strain Shintoku	20713990
TOT_010000647	mRNA	TOT_010000647	NC_025260.1	1586670	1587255	R	TOT_010000647	complement(join(<1586670..1586758,1586784..1586901,1587217..>1587255))	Theileria orientalis strain Shintoku	20713538
TOT_010000648	mRNA	TOT_010000648	NC_025260.1	1587273	1588082	D	TOT_010000648	<1587273..>1588082	Theileria orientalis strain Shintoku	20713539
TOT_010000649	mRNA	TOT_010000649	NC_025260.1	1588315	1591715	R	TOT_010000649	complement(join(<1588315..1588383,1588468..1588709,1588847..1589087,1589173..1589304,1589395..1590225,1590452..1590502,1590619..1590674,1590854..1591061,1591170..1591250,1591319..1591417,1591485..>1591715))	Theileria orientalis strain Shintoku	20713540
TOT_010000650	mRNA	TOT_010000650	NC_025260.1	1591923	1593815	D	TOT_010000650	join(<1591923..1593010,1593092..1593242,1593308..1593448,1593522..1593580,1593710..>1593815)	Theileria orientalis strain Shintoku	20713541
TOT_010000651	mRNA	TOT_010000651	NC_025260.1	1593820	1601462	R	TOT_010000651	complement(join(<1593820..1593888,1594166..1594291,1594371..1594449,1594514..1594614,1594806..1595066,1595233..1596423,1596651..1596770,1597202..1597287,1597451..1597517,1597590..1598117,1598431..1598489,1598613..1598948,1599168..1600172,1600188..1600391,1600431..1600521,1600627..1600746,1600868..1600994,1601032..1601194,1601324..>1601462))	Theileria orientalis strain Shintoku	20713542
TOT_010000652	mRNA	TOT_010000652	NC_025260.1	1602083	1603019	D	TOT_010000652	join(<1602083..1602563,1602907..>1603019)	Theileria orientalis strain Shintoku	20713543
TOT_010000653	mRNA	TOT_010000653	NC_025260.1	1603069	1603968	R	TOT_010000653	complement(<1603069..>1603968)	Theileria orientalis strain Shintoku	20713544
TOT_010000654	mRNA	TOT_010000654	NC_025260.1	1604936	1605550	R	TOT_010000654	complement(<1604936..>1605550)	Theileria orientalis strain Shintoku	20713545
TOT_010000655	mRNA	TOT_010000655	NC_025260.1	1606451	1610185	R	TOT_010000655	complement(join(<1606451..1606521,1606648..1606783,1606880..1607047,1607244..1607394,1607468..1607637,1607789..1608002,1608580..1608772,1608839..1609700,1609813..1609922,1609966..>1610185))	Theileria orientalis strain Shintoku	20713546
TOT_010001284	mRNA	TOT_010001284	NC_025260.1	1610716	1611628	D	TOT_010001284	join(<1610716..1610843,1610899..1610993,1611059..1611150,1611184..1611222,1611328..1611340,1611369..1611454,1611575..>1611628)	Theileria orientalis strain Shintoku	20714083
TOT_010000657	mRNA	TOT_010000657	NC_025260.1	1611758	1614310	D	TOT_010000657	join(<1611758..1611846,1612287..1612392,1612607..>1614310)	Theileria orientalis strain Shintoku	20713547
TOT_010000658	mRNA	TOT_010000658	NC_025260.1	1615281	1616900	D	TOT_010000658	<1615281..>1616900	Theileria orientalis strain Shintoku	20713548
TOT_010000659	mRNA	TOT_010000659	NC_025260.1	1617844	1619409	D	TOT_010000659	<1617844..>1619409	Theileria orientalis strain Shintoku	20713549
TOT_010000660	mRNA	TOT_010000660	NC_025260.1	1620380	1622026	D	TOT_010000660	<1620380..>1622026	Theileria orientalis strain Shintoku	20713550
TOT_010000661	mRNA	TOT_010000661	NC_025260.1	1622975	1624582	D	TOT_010000661	<1622975..>1624582	Theileria orientalis strain Shintoku	20713551
TOT_010000662	mRNA	TOT_010000662	NC_025260.1	1625553	1627085	D	TOT_010000662	<1625553..>1627085	Theileria orientalis strain Shintoku	20713552
TOT_010000663	mRNA	TOT_010000663	NC_025260.1	1628034	1629638	D	TOT_010000663	<1628034..>1629638	Theileria orientalis strain Shintoku	20713553
TOT_010000664	mRNA	TOT_010000664	NC_025260.1	1629943	1630443	R	TOT_010000664	complement(<1629943..>1630443)	Theileria orientalis strain Shintoku	20713554
TOT_010000665	mRNA	TOT_010000665	NC_025260.1	1630871	1632170	R	TOT_010000665	complement(join(<1630871..1631047,1631193..1631264,1631389..1631491,1631625..1631808,1631871..1631977,1632070..>1632170))	Theileria orientalis strain Shintoku	20713555
TOT_010000666	mRNA	TOT_010000666	NC_025260.1	1632529	1636469	D	TOT_010000666	join(<1632529..1633287,1633456..1634025,1634152..1634229,1634458..1634908,1635040..1635054,1635105..1635180,1635428..1635923,1636041..>1636469)	Theileria orientalis strain Shintoku	20713556
TOT_010000667	mRNA	TOT_010000667	NC_025260.1	1636540	1636812	D	TOT_010000667	<1636540..>1636812	Theileria orientalis strain Shintoku	20713557
TOT_010000668	mRNA	TOT_010000668	NC_025260.1	1636838	1639153	R	TOT_010000668	complement(join(<1636838..1637867,1637982..1638318,1638487..1638888,1639069..>1639153))	Theileria orientalis strain Shintoku	20713558
TOT_010000669	mRNA	TOT_010000669	NC_025260.1	1640769	1643476	D	TOT_010000669	join(<1640769..1641162,1641322..1641495,1641601..1643257,1643332..>1643476)	Theileria orientalis strain Shintoku	20713559
TOT_010000670	mRNA	TOT_010000670	NC_025260.1	1643551	1644867	D	TOT_010000670	<1643551..>1644867	Theileria orientalis strain Shintoku	20713560
TOT_010000671	mRNA	TOT_010000671	NC_025260.1	1645032	1646354	R	TOT_010000671	complement(join(<1645032..1645082,1645162..1645282,1645491..1645561,1645605..1645739,1645824..1645904,1645936..1646097,1646205..>1646354))	Theileria orientalis strain Shintoku	20713561
TOT_010000672	mRNA	TOT_010000672	NC_025260.1	1647091	1647658	D	TOT_010000672	join(<1647091..1647162,1647259..1647323,1647412..>1647658)	Theileria orientalis strain Shintoku	20713562
TOT_010001285	mRNA	TOT_010001285	NC_025260.1	1647901	1649813	R	TOT_010001285	complement(join(<1647901..1648857,1648976..1649164,1649335..1649474,1649723..>1649813))	Theileria orientalis strain Shintoku	20714084
TOT_010000674	mRNA	TOT_010000674	NC_025260.1	1650155	1652081	R	TOT_010000674	complement(join(<1650155..1650253,1650464..1650516,1650647..1650757,1650910..1650973,1651014..>1652081))	Theileria orientalis strain Shintoku	20713563
TOT_010000675	mRNA	TOT_010000675	NC_025260.1	1652904	1653202	R	TOT_010000675	complement(join(<1652904..1653023,1653149..>1653202))	Theileria orientalis strain Shintoku	20713564
TOT_010000676	mRNA	TOT_010000676	NC_025260.1	1653407	1654269	D	TOT_010000676	join(<1653407..1653589,1653663..1653827,1653955..>1654269)	Theileria orientalis strain Shintoku	20713565
TOT_010000677	mRNA	TOT_010000677	NC_025260.1	1654532	1656598	D	TOT_010000677	join(<1654532..1655045,1655140..1655297,1655459..1655547,1655583..1655667,1655704..1655742,1655794..1655850,1656131..>1656598)	Theileria orientalis strain Shintoku	20713566
TOT_010000678	mRNA	TOT_010000678	NC_025260.1	1656663	1659199	R	TOT_010000678	complement(join(<1656663..1656949,1657454..1657600,1657655..1657944,1658257..1658546,1658691..1659016,1659109..>1659199))	Theileria orientalis strain Shintoku	20713567
TOT_010000679	mRNA	TOT_010000679	NC_025260.1	1659417	1659852	R	TOT_010000679	complement(join(<1659417..1659512,1659607..1659666,1659697..1659731,1659765..>1659852))	Theileria orientalis strain Shintoku	20713568
TOT_010000680	mRNA	TOT_010000680	NC_025260.1	1660056	1662217	R	TOT_010000680	complement(join(<1660056..1660220,1660348..1660500,1660652..>1662217))	Theileria orientalis strain Shintoku	20713569
TOT_010000681	mRNA	TOT_010000681	NC_025260.1	1662374	1668917	R	TOT_010000681	complement(join(<1662374..1662651,1662925..1663121,1663270..1665548,1665849..>1668917))	Theileria orientalis strain Shintoku	20713570
TOT_010000682	mRNA	TOT_010000682	NC_025260.1	1669551	1670385	D	TOT_010000682	join(<1669551..1670082,1670204..>1670385)	Theileria orientalis strain Shintoku	20713571
TOT_010000683	mRNA	TOT_010000683	NC_025260.1	1670457	1674070	R	TOT_010000683	complement(join(<1670457..1670877,1670977..1671280,1671525..1671593,1671720..1671777,1671936..1672124,1672222..1672464,1672498..1673136,1673219..>1674070))	Theileria orientalis strain Shintoku	20713572
TOT_010000684	mRNA	TOT_010000684	NC_025260.1	1674189	1675745	R	TOT_010000684	complement(join(<1674189..1674463,1674559..1674835,1674953..1675214,1675290..1675459,1675671..>1675745))	Theileria orientalis strain Shintoku	20713573
TOT_010000685	mRNA	TOT_010000685	NC_025260.1	1676302	1677648	R	TOT_010000685	complement(<1676302..>1677648)	Theileria orientalis strain Shintoku	20713574
TOT_010000686	mRNA	TOT_010000686	NC_025260.1	1678445	1680956	D	TOT_010000686	join(<1678445..1678863,1678988..1679074,1679105..1679186,1679221..1679330,1679399..1679542,1679621..1679749,1679804..1679875,1680011..1680180,1680241..1680390,1680420..1680483,1680563..1680701,1680813..>1680956)	Theileria orientalis strain Shintoku	20713575
TOT_010001286	mRNA	TOT_010001286	NC_025260.1	1681101	1682721	D	TOT_010001286	join(<1681101..1681239,1681401..1681544,1681575..1681734,1681911..1682044,1682182..1682351,1682572..>1682721)	Theileria orientalis strain Shintoku	20714085
TOT_010000688	mRNA	TOT_010000688	NC_025260.1	1683492	1684481	R	TOT_010000688	complement(join(<1683492..1683669,1683757..1683929,1684006..1684463,1684469..>1684481))	Theileria orientalis strain Shintoku	20713576
TOT_010000689	mRNA	TOT_010000689	NC_025260.1	1684848	1686574	D	TOT_010000689	join(<1684848..1684983,1685032..1685085,1685196..1686110,1686249..1686382,1686476..>1686574)	Theileria orientalis strain Shintoku	20713577
TOT_010000690	mRNA	TOT_010000690	NC_025260.1	1687149	1696337	R	TOT_010000690	complement(join(<1687149..1687340,1688166..1689158,1689747..>1696337))	Theileria orientalis strain Shintoku	20713578
TOT_010000691	mRNA	TOT_010000691	NC_025260.1	1697694	1698628	D	TOT_010000691	join(<1697694..1697732,1697774..1697869,1697902..1697979,1698068..1698218,1698289..1698443,1698488..1698532,1698566..>1698628)	Theileria orientalis strain Shintoku	20713579
TOT_010000692	mRNA	TOT_010000692	NC_025260.1	1698804	1699494	D	TOT_010000692	join(<1698804..1698930,1698974..1699033,1699154..>1699494)	Theileria orientalis strain Shintoku	20713580
TOT_010000693	mRNA	TOT_010000693	NC_025260.1	1699837	1701009	R	TOT_010000693	complement(join(<1699837..1700130,1700171..1700515,1700620..1700858,1700898..>1701009))	Theileria orientalis strain Shintoku	20713581
TOT_010001191	mRNA	TOT_010001191	NC_025260.1	1701290	1702027	D	TOT_010001191	join(<1701290..1701589,1701625..1701657,1701701..1701802,1701839..>1702027)	Theileria orientalis strain Shintoku	20713991
TOT_010000695	mRNA	TOT_010000695	NC_025260.1	1702679	1704631	D	TOT_010000695	join(<1702679..1702752,1702786..1702943,1702975..1703972,1704356..>1704631)	Theileria orientalis strain Shintoku	20713582
TOT_010000696	mRNA	TOT_010000696	NC_025260.1	1704712	1706670	R	TOT_010000696	complement(join(<1704712..1704843,1704943..1705340,1705556..1705990,1706022..1706142,1706363..1706434,1706479..>1706670))	Theileria orientalis strain Shintoku	20713583
TOT_010001287	mRNA	TOT_010001287	NC_025260.1	1706692	1709025	R	TOT_010001287	complement(<1706692..>1709025)	Theileria orientalis strain Shintoku	20714086
TOT_010000698	mRNA	TOT_010000698	NC_025260.1	1709162	1711837	R	TOT_010000698	complement(join(<1709162..1709370,1709415..1709819,1710136..1710253,1710348..1710457,1710564..1710774,1710918..1711154,1711276..1711532,1711564..1711632,1711696..>1711837))	Theileria orientalis strain Shintoku	20713584
TOT_010000699	mRNA	TOT_010000699	NC_025260.1	1712578	1715544	D	TOT_010000699	<1712578..>1715544	Theileria orientalis strain Shintoku	20713585
TOT_010001192	mRNA	TOT_010001192	NC_025260.1	1715604	1716114	D	TOT_010001192	join(<1715604..1715744,1715790..1715883,1716041..>1716114)	Theileria orientalis strain Shintoku	20713992
TOT_010000700	mRNA	TOT_010000700	NC_025260.1	1716139	1717442	R	TOT_010000700	complement(join(<1716139..1716236,1716268..1716368,1716460..1716588,1716620..1716728,1716768..1716860,1716893..1717267,1717358..>1717442))	Theileria orientalis strain Shintoku	20713586
TOT_010000701	mRNA	TOT_010000701	NC_025260.1	1717614	1718722	D	TOT_010000701	join(<1717614..1717997,1718055..1718104,1718139..1718314,1718344..1718435,1718591..>1718722)	Theileria orientalis strain Shintoku	20713587
TOT_010000702	mRNA	TOT_010000702	NC_025260.1	1718893	1719921	R	TOT_010000702	complement(join(<1718893..1719014,1719087..1719221,1719257..1719327,1719358..1719404,1719438..1719543,1719621..1719699,1719753..>1719921))	Theileria orientalis strain Shintoku	20713588
TOT_010000703	mRNA	TOT_010000703	NC_025260.1	1720041	1721903	R	TOT_010000703	complement(join(<1720041..1720121,1720160..1720247,1720285..1720412,1720442..1720863,1721050..1721205,1721237..1721683,1721720..>1721903))	Theileria orientalis strain Shintoku	20713589
TOT_010001288	mRNA	TOT_010001288	NC_025260.1	1722626	1724353	D	TOT_010001288	<1722626..>1724353	Theileria orientalis strain Shintoku	20714087
TOT_010000705	mRNA	TOT_010000705	NC_025260.1	1724455	1725034	D	TOT_010000705	join(<1724455..1724700,1724735..>1725034)	Theileria orientalis strain Shintoku	20713590
TOT_010000706	mRNA	TOT_010000706	NC_025260.1	1725309	1731506	R	TOT_010000706	complement(join(<1725309..1725530,1725643..1725828,1725860..1725989,1726064..1726168,1726300..1726371,1726403..1726568,1726598..1726910,1726949..1727143,1727296..1727599,1727676..1727782,1727895..1728010,1728340..1728821,1728982..>1731506))	Theileria orientalis strain Shintoku	20713591
TOT_010000707	mRNA	TOT_010000707	NC_025260.1	1731825	1734921	D	TOT_010000707	join(<1731825..1732046,1732077..1732224,1732257..1732342,1732373..1732635,1732668..1733051,1733151..1733334,1733366..1733490,1733712..1733817,1733904..1734005,1734239..1734486,1734651..>1734921)	Theileria orientalis strain Shintoku	20713592
TOT_010000708	mRNA	TOT_010000708	NC_025260.1	1735153	1735676	R	TOT_010000708	complement(join(<1735153..1735290,1735321..1735465,1735495..>1735676))	Theileria orientalis strain Shintoku	20713593
TOT_010000709	mRNA	TOT_010000709	NC_025260.1	1735821	1737959	R	TOT_010000709	complement(join(<1735821..1736725,1736833..1736958,1737031..1737880,1737912..>1737959))	Theileria orientalis strain Shintoku	20713594
TOT_010000710	mRNA	TOT_010000710	NC_025260.1	1738853	1742175	D	TOT_010000710	join(<1738853..1739922,1740008..1740155,1740217..1740306,1740427..1740523,1740680..1741342,1741470..1741657,1741697..1741878,1742076..>1742175)	Theileria orientalis strain Shintoku	20713595
TOT_010001289	mRNA	TOT_010001289	NC_025260.1	1742684	1743458	R	TOT_010001289	complement(join(<1742684..1743207,1743347..>1743458))	Theileria orientalis strain Shintoku	20714088
TOT_010000712	mRNA	TOT_010000712	NC_025260.1	1744053	1747239	R	TOT_010000712	complement(join(<1744053..1744343,1744712..1745029,1745178..1745285,1745317..1745530,1745605..1745696,1745789..1745925,1745980..1746192,1746318..1746576,1746606..1746731,1746764..1746969,1747000..1747087,1747129..>1747239))	Theileria orientalis strain Shintoku	20713596
TOT_010001290	mRNA	TOT_010001290	NC_025260.1	1747853	1751674	D	TOT_010001290	join(<1747853..1748262,1748315..1748526,1748563..1748663,1748701..1748829,1748892..1749020,1749053..1749367,1749398..1749493,1749525..1750045,1750079..1750517,1750558..1750741,1750802..1750930,1750963..1751062,1751608..>1751674)	Theileria orientalis strain Shintoku	20714089
TOT_010000714	mRNA	TOT_010000714	NC_025260.1	1751768	1753798	R	TOT_010000714	complement(join(<1751768..1752010,1752051..1752254,1752285..1752360,1752498..1752669,1752704..1753366,1753399..>1753798))	Theileria orientalis strain Shintoku	20713597
TOT_010000715	mRNA	TOT_010000715	NC_025260.1	1754724	1755941	D	TOT_010000715	join(<1754724..1755148,1755179..>1755941)	Theileria orientalis strain Shintoku	20713598
TOT_010000716	mRNA	TOT_010000716	NC_025260.1	1756167	1759065	R	TOT_010000716	complement(join(<1756167..1758112,1758150..1758603,1758637..>1759065))	Theileria orientalis strain Shintoku	20713599
TOT_010000717	mRNA	TOT_010000717	NC_025260.1	1759185	1759781	D	TOT_010000717	join(<1759185..1759492,1759523..>1759781)	Theileria orientalis strain Shintoku	20713600
TOT_010000718	mRNA	TOT_010000718	NC_025260.1	1759969	1761488	R	TOT_010000718	complement(join(<1759969..1760058,1760107..1760274,1760425..1761051,1761132..>1761488))	Theileria orientalis strain Shintoku	20713601
TOT_010000719	mRNA	TOT_010000719	NC_025260.1	1761772	1763752	D	TOT_010000719	join(<1761772..1762127,1762158..1762377,1762407..1762578,1762656..1763139,1763251..1763324,1763424..>1763752)	Theileria orientalis strain Shintoku	20713602
TOT_010000720	mRNA	TOT_010000720	NC_025260.1	1763866	1765563	D	TOT_010000720	join(<1763866..1764079,1764114..1764174,1764284..1764436,1764490..1764552,1764877..1765019,1765265..>1765563)	Theileria orientalis strain Shintoku	20713603
TOT_010000721	mRNA	TOT_010000721	NC_025260.1	1765850	1768579	R	TOT_010000721	complement(<1765850..>1768579)	Theileria orientalis strain Shintoku	20713604
TOT_010001291	mRNA	TOT_010001291	NC_025260.1	1768974	1769540	D	TOT_010001291	<1768974..>1769540	Theileria orientalis strain Shintoku	20714090
TOT_010000723	mRNA	TOT_010000723	NC_025260.1	1769806	1771476	D	TOT_010000723	join(<1769806..1771406,1771452..>1771476)	Theileria orientalis strain Shintoku	20713605
TOT_010000724	mRNA	TOT_010000724	NC_025260.1	1771534	1778389	R	TOT_010000724	complement(join(<1771534..1771795,1771977..1772122,1772325..1772808,1772933..1773269,1773408..1773536,1773658..1773921,1774159..1775504,1775707..1776082,1776313..1776400,1776491..1777816,1777952..1778130,1778164..1778287,1778327..>1778389))	Theileria orientalis strain Shintoku	20713606
TOT_010000725	mRNA	TOT_010000725	NC_025260.1	1778524	1778777	D	TOT_010000725	join(<1778524..1778620,1778686..>1778777)	Theileria orientalis strain Shintoku	20713607
TOT_010000726	mRNA	TOT_010000726	NC_025260.1	1779321	1782332	D	TOT_010000726	join(<1779321..1779954,1780042..>1782332)	Theileria orientalis strain Shintoku	20713608
TOT_010000727	mRNA	TOT_010000727	NC_025260.1	1782643	1786384	R	TOT_010000727	complement(join(<1782643..1783239,1783333..1783375,1783407..1783861,1783895..1784450,1784578..1784776,1784812..1784950,1785110..1785907,1786244..>1786384))	Theileria orientalis strain Shintoku	20713609
TOT_010000728	mRNA	TOT_010000728	NC_025260.1	1786835	1787580	R	TOT_010000728	complement(join(<1786835..1787170,1787209..>1787580))	Theileria orientalis strain Shintoku	20713610
TOT_010000729	mRNA	TOT_010000729	NC_025260.1	1787600	1789094	R	TOT_010000729	complement(join(<1787600..1787898,1787936..>1789094))	Theileria orientalis strain Shintoku	20713611
TOT_010000730	mRNA	TOT_010000730	NC_025260.1	1789745	1792008	D	TOT_010000730	join(<1789745..1790186,1790216..1790283,1790343..1790450,1790504..1790609,1790633..1790855,1791055..1791391,1791505..>1792008)	Theileria orientalis strain Shintoku	20713612
TOT_010000731	mRNA	TOT_010000731	NC_025260.1	1792123	1793643	D	TOT_010000731	<1792123..>1793643	Theileria orientalis strain Shintoku	20713613
TOT_010000732	mRNA	TOT_010000732	NC_025260.1	1793828	1797493	R	TOT_010000732	complement(<1793828..>1797493)	Theileria orientalis strain Shintoku	20713614
TOT_010000733	mRNA	TOT_010000733	NC_025260.1	1798428	1801364	R	TOT_010000733	complement(<1798428..>1801364)	Theileria orientalis strain Shintoku	20713615
TOT_010000734	mRNA	TOT_010000734	NC_025260.1	1802835	1803803	R	TOT_010000734	complement(<1802835..>1803803)	Theileria orientalis strain Shintoku	20713616
TOT_010000735	mRNA	TOT_010000735	NC_025260.1	1804387	1806827	R	TOT_010000735	complement(join(<1804387..1804647,1805443..1805519,1805692..1806443,1806592..>1806827))	Theileria orientalis strain Shintoku	20713617
TOT_010000736	mRNA	TOT_010000736	NC_025260.1	1807060	1807704	D	TOT_010000736	join(<1807060..1807080,1807141..1807313,1807416..>1807704)	Theileria orientalis strain Shintoku	20713618
TOT_010001292	mRNA	TOT_010001292	NC_025260.1	1807666	1809374	R	TOT_010001292	complement(join(<1807666..1807812,1807896..1808075,1808125..1808201,1808232..1808345,1808536..1808674,1808704..1808825,1808857..1809011,1809043..1809191,1809228..>1809374))	Theileria orientalis strain Shintoku	20714091
TOT_010000738	mRNA	TOT_010000738	NC_025260.1	1809733	1810230	D	TOT_010000738	join(<1809733..1809923,1810012..1810112,1810139..>1810230)	Theileria orientalis strain Shintoku	20713619
TOT_010000739	mRNA	TOT_010000739	NC_025260.1	1810545	1812433	D	TOT_010000739	join(<1810545..1811309,1811579..>1812433)	Theileria orientalis strain Shintoku	20713620
TOT_010000740	mRNA	TOT_010000740	NC_025260.1	1812713	1813824	R	TOT_010000740	complement(join(<1812713..1812823,1812989..1813066,1813096..1813165,1813202..1813345,1813378..1813469,1813503..1813579,1813610..1813724,1813759..>1813824))	Theileria orientalis strain Shintoku	20713621
TOT_010000741	mRNA	TOT_010000741	NC_025260.1	1813924	1814953	D	TOT_010000741	join(<1813924..1813988,1814021..1814237,1814302..1814382,1814415..1814489,1814522..1814695,1814729..1814829,1814860..>1814953)	Theileria orientalis strain Shintoku	20713622
TOT_010000742	mRNA	TOT_010000742	NC_025260.1	1815240	1816760	D	TOT_010000742	join(<1815240..1815333,1815466..1816160,1816224..>1816760)	Theileria orientalis strain Shintoku	20713623
TOT_010000743	mRNA	TOT_010000743	NC_025260.1	1817406	1819100	R	TOT_010000743	complement(join(<1817406..1817656,1817716..1818189,1818279..1818417,1818554..1818663,1818696..1818958,1818991..>1819100))	Theileria orientalis strain Shintoku	20713624
TOT_010000744	mRNA	TOT_010000744	NC_025260.1	1819335	1819956	R	TOT_010000744	complement(join(<1819335..1819568,1819607..1819727,1819772..>1819956))	Theileria orientalis strain Shintoku	20713625
TOT_010000745	mRNA	TOT_010000745	NC_025260.1	1820187	1821338	D	TOT_010000745	<1820187..>1821338	Theileria orientalis strain Shintoku	20713626
TOT_010000746	mRNA	TOT_010000746	NC_025260.1	1821528	1822937	R	TOT_010000746	complement(<1821528..>1822937)	Theileria orientalis strain Shintoku	20713627
TOT_010000747	mRNA	TOT_010000747	NC_025260.1	1823139	1824354	D	TOT_010000747	join(<1823139..1823505,1823538..1824115,1824166..>1824354)	Theileria orientalis strain Shintoku	20713628
TOT_010000748	mRNA	TOT_010000748	NC_025260.1	1824532	1826787	D	TOT_010000748	join(<1824532..1824685,1824722..1824820,1824873..1825014,1825048..1825150,1825181..1825383,1825414..1825510,1825542..1825607,1825720..1826235,1826381..1826509,1826541..1826625,1826660..>1826787)	Theileria orientalis strain Shintoku	20713629
TOT_010000749	mRNA	TOT_010000749	NC_025260.1	1827247	1827637	D	TOT_010000749	join(<1827247..1827404,1827436..1827505,1827536..>1827637)	Theileria orientalis strain Shintoku	20713630
TOT_010000750	mRNA	TOT_010000750	NC_025260.1	1827933	1831137	R	TOT_010000750	complement(join(<1827933..1828547,1828830..1829096,1829333..1829914,1829935..1830104,1830149..1830905,1831018..>1831137))	Theileria orientalis strain Shintoku	20713631
TOT_010001293	mRNA	TOT_010001293	NC_025260.1	1831395	1833466	D	TOT_010001293	join(<1831395..1832491,1832522..1832627,1832816..>1833466)	Theileria orientalis strain Shintoku	20714092
TOT_010000752	mRNA	TOT_010000752	NC_025260.1	1833531	1833788	R	TOT_010000752	complement(join(<1833531..1833698,1833729..>1833788))	Theileria orientalis strain Shintoku	20713632
TOT_010000753	mRNA	TOT_010000753	NC_025260.1	1834024	1838666	D	TOT_010000753	join(<1834024..1834103,1834142..1834195,1834231..1834524,1834555..1834613,1834645..1835021,1835135..1835252,1835286..1835434,1835520..1835849,1836011..1836145,1836285..1836500,1836750..1836980,1837153..1837333,1837410..1837837,1838011..1838167,1838410..>1838666)	Theileria orientalis strain Shintoku	20713633
TOT_010000754	mRNA	TOT_010000754	NC_025260.1	1838735	1839199	R	TOT_010000754	complement(join(<1838735..1839117,1839157..>1839199))	Theileria orientalis strain Shintoku	20713634
TOT_010000755	mRNA	TOT_010000755	NC_025260.1	1839993	1842048	D	TOT_010000755	join(<1839993..1840078,1840109..1840205,1840235..1840373,1840430..1840585,1840691..1840878,1840969..1841152,1841194..1841307,1841351..1841420,1841769..>1842048)	Theileria orientalis strain Shintoku	20713635
TOT_010000756	mRNA	TOT_010000756	NC_025260.1	1842377	1842652	D	TOT_010000756	<1842377..>1842652	Theileria orientalis strain Shintoku	20713636
TOT_010000757	mRNA	TOT_010000757	NC_025260.1	1842940	1845301	R	TOT_010000757	complement(join(<1842940..1843718,1843764..1844193,1844312..1844392,1844423..>1845301))	Theileria orientalis strain Shintoku	20713637
TOT_010000758	mRNA	TOT_010000758	NC_025260.1	1845339	1846527	R	TOT_010000758	complement(join(<1845339..1845492,1845524..1845583,1845746..1845844,1845875..1846023,1846053..1846164,1846196..>1846527))	Theileria orientalis strain Shintoku	20713638
TOT_010000759	mRNA	TOT_010000759	NC_025260.1	1846956	1848585	D	TOT_010000759	join(<1846956..1846959,1846993..1847525,1847558..1847735,1847779..1847842,1847881..1848020,1848056..1848079,1848111..1848136,1848166..1848268,1848303..1848406,1848439..1848471,1848505..>1848585)	Theileria orientalis strain Shintoku	20713639
TOT_010000760	mRNA	TOT_010000760	NC_025260.1	1849352	1850053	D	TOT_010000760	join(<1849352..1849401,1849436..1849515,1849547..1849714,1849746..1849874,1849911..>1850053)	Theileria orientalis strain Shintoku	20713640
TOT_010000761	mRNA	TOT_010000761	NC_025260.1	1850508	1853732	D	TOT_010000761	join(<1850508..1850637,1850665..1850875,1850906..1851009,1851039..1851301,1851332..1851428,1851461..1851549,1851582..1851668,1851829..1851882,1851922..1852023,1852068..1852132,1852174..1852285,1852317..1852586,1852622..1852756,1852825..1853119,1853302..1853346,1853387..1853589,1853628..>1853732)	Theileria orientalis strain Shintoku	20713641
TOT_010000762	mRNA	TOT_010000762	NC_025260.1	1853788	1854089	R	TOT_010000762	complement(join(<1853788..1853919,1853949..>1854089))	Theileria orientalis strain Shintoku	20713642
TOT_010000763	mRNA	TOT_010000763	NC_025260.1	1854571	1858167	D	TOT_010000763	<1854571..>1858167	Theileria orientalis strain Shintoku	20713643
TOT_010000764	mRNA	TOT_010000764	NC_025260.1	1858564	1862445	D	TOT_010000764	<1858564..>1862445	Theileria orientalis strain Shintoku	20713644
TOT_010001294	mRNA	TOT_010001294	NC_025260.1	1862727	1869944	R	TOT_010001294	complement(join(<1862727..1862989,1863292..1863638,1863777..1863864,1864050..1864270,1864439..1865307,1865434..1866655,1866818..1868489,1868538..1868921,1869066..1869445,1869477..1869613,1869645..>1869944))	Theileria orientalis strain Shintoku	20714093
TOT_010000766	mRNA	TOT_010000766	NC_025260.1	1870472	1871764	R	TOT_010000766	complement(join(<1870472..1870571,1870595..1870806,1870848..1870973,1871079..1871583,1871616..>1871764))	Theileria orientalis strain Shintoku	20713645
TOT_010000767	mRNA	TOT_010000767	NC_025260.1	1872101	1873090	R	TOT_010000767	complement(join(<1872101..1872215,1872283..1872430,1872611..1872833,1872865..1872923,1872955..>1873090))	Theileria orientalis strain Shintoku	20713646
TOT_010000768	mRNA	TOT_010000768	NC_025260.1	1873660	1874875	R	TOT_010000768	complement(join(<1873660..1874496,1874535..1874603,1874640..1874710,1874791..>1874875))	Theileria orientalis strain Shintoku	20713647
TOT_010000769	mRNA	TOT_010000769	NC_025260.1	1875285	1877066	R	TOT_010000769	complement(join(<1875285..1875844,1876066..1876389,1876511..>1877066))	Theileria orientalis strain Shintoku	20713648
TOT_010000770	mRNA	TOT_010000770	NC_025260.1	1878589	1881319	R	TOT_010000770	complement(join(<1878589..1878657,1878789..1879000,1879067..1879279,1879323..1879417,1879571..1879650,1879807..1880247,1880438..1880684,1880715..1880898,1880929..1881168,1881199..>1881319))	Theileria orientalis strain Shintoku	20713649
TOT_010000771	mRNA	TOT_010000771	NC_025260.1	1881585	1883151	D	TOT_010000771	join(<1881585..1881870,1881960..1882018,1882106..1882471,1882576..1882694,1882820..1882885,1882947..>1883151)	Theileria orientalis strain Shintoku	20713650
TOT_010000772	mRNA	TOT_010000772	NC_025260.1	1883361	1884905	D	TOT_010000772	<1883361..>1884905	Theileria orientalis strain Shintoku	20713651
TOT_010000773	mRNA	TOT_010000773	NC_025260.1	1885274	1887589	D	TOT_010000773	join(<1885274..1885511,1885542..1886083,1886121..1886192,1886232..1886369,1886489..1886551,1886583..1886708,1886785..1886841,1886939..1887099,1887204..1887356,1887391..>1887589)	Theileria orientalis strain Shintoku	20713652
TOT_010001295	mRNA	TOT_010001295	NC_025260.1	1888574	1892092	D	TOT_010001295	join(<1888574..1890221,1890876..>1892092)	Theileria orientalis strain Shintoku	20714094
TOT_010000775	mRNA	TOT_010000775	NC_025260.1	1892425	1893387	D	TOT_010000775	join(<1892425..1893207,1893286..>1893387)	Theileria orientalis strain Shintoku	20713653
TOT_010000776	mRNA	TOT_010000776	NC_025260.1	1893590	1896156	R	TOT_010000776	complement(join(<1893590..1893863,1894037..1894137,1894345..1894669,1894714..1894964,1895055..1895167,1895203..1895533,1895567..1895674,1895707..>1896156))	Theileria orientalis strain Shintoku	20713654
TOT_010000777	mRNA	TOT_010000777	NC_025260.1	1896886	1897989	D	TOT_010000777	<1896886..>1897989	Theileria orientalis strain Shintoku	20713655
TOT_010000778	mRNA	TOT_010000778	NC_025260.1	1898232	1899764	D	TOT_010000778	join(<1898232..1898307,1898401..1899705,1899763..>1899764)	Theileria orientalis strain Shintoku	20713656
TOT_010001296	mRNA	TOT_010001296	NC_025260.1	1902371	1903646	D	TOT_010001296	join(<1902371..1902783,1902815..1902971,1903104..1903157,1903197..>1903646)	Theileria orientalis strain Shintoku	20714095
TOT_010001193	mRNA	TOT_010001193	NC_025260.1	1903850	1905222	R	TOT_010001193	complement(join(<1903850..1903903,1903970..1904026,1904070..1904162,1904192..1904302,1904421..1904508,1904629..1904732,1904883..1905034,1905070..1905162,1905207..>1905222))	Theileria orientalis strain Shintoku	20713993
TOT_010000780	mRNA	TOT_010000780	NC_025260.1	1905750	1906171	R	TOT_010000780	complement(join(<1905750..1905799,1905838..1905964,1905995..1906063,1906100..>1906171))	Theileria orientalis strain Shintoku	20713657
TOT_010000781	mRNA	TOT_010000781	NC_025260.1	1906467	1908205	D	TOT_010000781	join(<1906467..1906678,1906760..1907102,1907135..1907869,1907912..1908039,1908085..>1908205)	Theileria orientalis strain Shintoku	20713658
TOT_010000782	mRNA	TOT_010000782	NC_025260.1	1908358	1909474	D	TOT_010000782	join(<1908358..1908606,1908639..1908697,1908731..1908831,1908863..1909150,1909182..1909276,1909316..1909393,1909406..>1909474)	Theileria orientalis strain Shintoku	20713659
TOT_010000783	mRNA	TOT_010000783	NC_025260.1	1909656	1910777	D	TOT_010000783	<1909656..>1910777	Theileria orientalis strain Shintoku	20713660
TOT_010000784	mRNA	TOT_010000784	NC_025260.1	1911055	1914447	R	TOT_010000784	complement(join(<1911055..1911217,1911335..1911882,1911989..1912054,1912086..1912163,1912359..1912443,1912489..1912570,1912697..1912871,1912948..1913085,1913126..1913292,1913323..1913624,1913658..1914337,1914370..>1914447))	Theileria orientalis strain Shintoku	20713661
TOT_010000785	mRNA	TOT_010000785	NC_025260.1	1914690	1914967	D	TOT_010000785	join(<1914690..1914780,1914816..>1914967)	Theileria orientalis strain Shintoku	20713662
TOT_010001297	mRNA	TOT_010001297	NC_025260.1	1915470	1918790	D	TOT_010001297	join(<1915470..1915619,1915650..1917620,1917780..1917873,1917904..1918048,1918298..>1918790)	Theileria orientalis strain Shintoku	20714096
TOT_010000787	mRNA	TOT_010000787	NC_025260.1	1918844	1921984	D	TOT_010000787	<1918844..>1921984	Theileria orientalis strain Shintoku	20713663
TOT_010001298	mRNA	TOT_010001298	NC_025260.1	1922519	1924818	R	TOT_010001298	complement(join(<1922519..1922704,1922734..1922933,1923180..1923868,1923932..>1924818))	Theileria orientalis strain Shintoku	20714097
TOT_010000789	mRNA	TOT_010000789	NC_025260.1	1924856	1925401	R	TOT_010000789	complement(join(<1924856..1925238,1925272..>1925401))	Theileria orientalis strain Shintoku	20713664
TOT_010001299	mRNA	TOT_010001299	NC_025260.1	1925459	1928713	R	TOT_010001299	complement(join(<1925459..1925564,1925604..1925653,1925684..1925770,1925801..1925885,1925960..1926063,1926146..1926867,1926903..1927116,1927291..1928005,1928046..1928092,1928125..1928232,1928262..1928415,1928445..1928578,1928609..>1928713))	Theileria orientalis strain Shintoku	20714098
TOT_010000791	mRNA	TOT_010000791	NC_025260.1	1929578	1932278	R	TOT_010000791	complement(join(<1929578..1929650,1929680..1929839,1929950..1930015,1930047..1930099,1930157..1930305,1930422..1930603,1930672..1930795,1930835..1930917,1930988..1931171,1931212..1931326,1931357..1931505,1931572..1931730,1931761..1931855,1931888..1931969,1932005..1932180,1932200..>1932278))	Theileria orientalis strain Shintoku	20713665
TOT_010000792	mRNA	TOT_010000792	NC_025260.1	1933025	1934622	D	TOT_010000792	join(<1933025..1933308,1933339..1933384,1933415..1933519,1933550..1933619,1933652..1933926,1934121..1934294,1934386..>1934622)	Theileria orientalis strain Shintoku	20713666
TOT_010000793	mRNA	TOT_010000793	NC_025260.1	1934720	1936196	D	TOT_010000793	join(<1934720..1934753,1934786..1934899,1934940..1935016,1935051..1935700,1935755..>1936196)	Theileria orientalis strain Shintoku	20713667
TOT_010000794	mRNA	TOT_010000794	NC_025260.1	1936853	1937387	D	TOT_010000794	join(<1936853..1936867,1936898..1937004,1937219..>1937387)	Theileria orientalis strain Shintoku	20713668
TOT_010000795	mRNA	TOT_010000795	NC_025260.1	1937547	1938902	R	TOT_010000795	complement(<1937547..>1938902)	Theileria orientalis strain Shintoku	20713669
TOT_010000796	mRNA	TOT_010000796	NC_025260.1	1939025	1941608	R	TOT_010000796	complement(join(<1939025..1939153,1939183..1939404,1939481..1939622,1939653..1939897,1939942..1940160,1940255..1940345,1940383..1940477,1940510..1940635,1940671..1940757,1940790..>1941608))	Theileria orientalis strain Shintoku	20713670
TOT_010000797	mRNA	TOT_010000797	NC_025260.1	1941813	1944601	D	TOT_010000797	join(<1941813..1943759,1943870..>1944601)	Theileria orientalis strain Shintoku	20713671
TOT_010000798	mRNA	TOT_010000798	NC_025260.1	1944876	1946285	R	TOT_010000798	complement(join(<1944876..1945000,1945163..1945237,1945269..1945348,1945550..1945620,1945730..1946073,1946105..>1946285))	Theileria orientalis strain Shintoku	20713672
TOT_010001300	mRNA	TOT_010001300	NC_025260.1	1947097	1948137	D	TOT_010001300	<1947097..>1948137	Theileria orientalis strain Shintoku	20714099
TOT_010000800	mRNA	TOT_010000800	NC_025260.1	1948510	1951384	R	TOT_010000800	complement(join(<1948510..1948732,1948862..1948967,1949169..1949313,1949730..1949857,1949949..1950049,1950341..1950740,1950836..1950989,1951120..1951272,1951307..>1951384))	Theileria orientalis strain Shintoku	20713673
TOT_010000801	mRNA	TOT_010000801	NC_025260.1	1951797	1953475	R	TOT_010000801	complement(join(<1951797..1952033,1952172..1952258,1952353..1952488,1952759..1952874,1952908..1952994,1953076..1953296,1953328..>1953475))	Theileria orientalis strain Shintoku	20713674
TOT_010000803	mRNA	TOT_010000803	NC_025260.1	1953794	1954858	D	TOT_010000803	join(<1953794..1954008,1954099..1954214,1954247..1954381,1954417..1954486,1954522..1954615,1954697..>1954858)	Theileria orientalis strain Shintoku	20713675
TOT_010000804	mRNA	TOT_010000804	NC_025260.1	1955123	1956121	R	TOT_010000804	complement(join(<1955123..1955397,1955507..1955878,1955938..1955964,1956034..>1956121))	Theileria orientalis strain Shintoku	20713676
TOT_010000805	mRNA	TOT_010000805	NC_025260.1	1956367	1957479	R	TOT_010000805	complement(join(<1956367..1957043,1957086..>1957479))	Theileria orientalis strain Shintoku	20713677
TOT_010000806	mRNA	TOT_010000806	NC_025260.1	1957653	1958691	R	TOT_010000806	complement(join(<1957653..1957740,1957822..1957892,1957934..1958074,1958115..1958225,1958258..1958456,1958516..1958571,1958611..>1958691))	Theileria orientalis strain Shintoku	20713678
TOT_010000807	mRNA	TOT_010000807	NC_025260.1	1958837	1959133	D	TOT_010000807	<1958837..>1959133	Theileria orientalis strain Shintoku	20713679
TOT_010000808	mRNA	TOT_010000808	NC_025260.1	1959172	1959967	R	TOT_010000808	complement(join(<1959172..1959482,1959517..>1959967))	Theileria orientalis strain Shintoku	20713680
TOT_010000809	mRNA	TOT_010000809	NC_025260.1	1960093	1960948	D	TOT_010000809	join(<1960093..1960351,1960460..1960602,1960663..1960737,1960769..1960820,1960899..>1960948)	Theileria orientalis strain Shintoku	20713681
TOT_010001194	mRNA	TOT_010001194	NC_025260.1	1961201	1961999	D	TOT_010001194	join(<1961201..1961426,1961494..1961763,1961899..>1961999)	Theileria orientalis strain Shintoku	20713994
TOT_010000810	mRNA	TOT_010000810	NC_025260.1	1962561	1963630	D	TOT_010000810	join(<1962561..1962912,1962942..>1963630)	Theileria orientalis strain Shintoku	20713682
TOT_010000811	mRNA	TOT_010000811	NC_025260.1	1963834	1965723	D	TOT_010000811	join(<1963834..1965389,1965666..>1965723)	Theileria orientalis strain Shintoku	20713683
TOT_010000812	mRNA	TOT_010000812	NC_025260.1	1966178	1968294	R	TOT_010000812	complement(join(<1966178..1966411,1966622..1966734,1966944..1967232,1967437..1967584,1967616..1967691,1967721..1967852,1967887..1968038,1968119..>1968294))	Theileria orientalis strain Shintoku	20713684
TOT_010000813	mRNA	TOT_010000813	NC_025260.1	1968476	1970118	D	TOT_010000813	join(<1968476..1968744,1968807..1968882,1968914..1968993,1969023..1969139,1969278..1969461,1969566..1969600,1969646..1969733,1969769..1969838,1969869..1969928,1970006..>1970118)	Theileria orientalis strain Shintoku	20713685
TOT_010000814	mRNA	TOT_010000814	NC_025260.1	1970217	1971429	R	TOT_010000814	complement(join(<1970217..1970901,1971051..1971265,1971325..>1971429))	Theileria orientalis strain Shintoku	20713686
TOT_010000815	mRNA	TOT_010000815	NC_025260.1	1973029	1978932	D	TOT_010000815	join(<1973029..1975333,1975460..1978143,1978465..>1978932)	Theileria orientalis strain Shintoku	20713687
TOT_010001301	mRNA	TOT_010001301	NC_025260.1	1980590	1981363	R	TOT_010001301	complement(join(<1980590..1980847,1980899..>1981363))	Theileria orientalis strain Shintoku	20714100
TOT_010000817	mRNA	TOT_010000817	NC_025260.1	1981758	1983615	D	TOT_010000817	join(<1981758..1981802,1981838..1982003,1982036..1982329,1982360..1983315,1983442..>1983615)	Theileria orientalis strain Shintoku	20713688
TOT_010001302	mRNA	TOT_010001302	NC_025260.1	1983907	1985380	D	TOT_010001302	join(<1983907..1984103,1984140..1984444,1984538..1984599,1984632..1984665,1984697..1984814,1984874..1984969,1985037..1985155,1985205..>1985380)	Theileria orientalis strain Shintoku	20714101
TOT_010001303	mRNA	TOT_010001303	NC_025260.1	1985639	1986825	D	TOT_010001303	join(<1985639..1985866,1985929..1986111,1986143..1986247,1986281..1986349,1986382..1986519,1986577..>1986825)	Theileria orientalis strain Shintoku	20714102
TOT_010000819	mRNA	TOT_010000819	NC_025260.1	1987764	1990538	D	TOT_010000819	join(<1987764..1989485,1989732..>1990538)	Theileria orientalis strain Shintoku	20713689
TOT_010000820	mRNA	TOT_010000820	NC_025260.1	1991778	1995891	D	TOT_010000820	join(<1991778..1995753,1995791..>1995891)	Theileria orientalis strain Shintoku	20713690
TOT_010000821	mRNA	TOT_010000821	NC_025260.1	1995949	1996282	R	TOT_010000821	complement(join(<1995949..1996047,1996226..>1996282))	Theileria orientalis strain Shintoku	20713691
TOT_010000822	mRNA	TOT_010000822	NC_025260.1	1996433	1997193	D	TOT_010000822	join(<1996433..1996479,1996664..1997042,1997062..>1997193)	Theileria orientalis strain Shintoku	20713692
TOT_010000823	mRNA	TOT_010000823	NC_025260.1	1997347	1998452	R	TOT_010000823	complement(join(<1997347..1997463,1997505..1997644,1997675..1997753,1997783..1997941,1997981..1998083,1998157..>1998452))	Theileria orientalis strain Shintoku	20713693
TOT_010000824	mRNA	TOT_010000824	NC_025260.1	1998559	1999691	R	TOT_010000824	complement(join(<1998559..1998581,1998614..1998700,1998766..1998857,1998902..1999014,1999069..1999176,1999215..1999490,1999587..>1999691))	Theileria orientalis strain Shintoku	20713694
TOT_010000825	mRNA	TOT_010000825	NC_025260.1	2000044	2002522	R	TOT_010000825	complement(join(<2000044..2000200,2000239..2000863,2000937..2001087,2001120..2001275,2001311..2001442,2001473..2001579,2001649..2001852,2002153..2002231,2002271..2002327,2002403..>2002522))	Theileria orientalis strain Shintoku	20713695
TOT_010000826	mRNA	TOT_010000826	NC_025260.1	2002701	2003782	R	TOT_010000826	complement(join(<2002701..2002762,2002825..2002867,2002987..2003055,2003087..2003160,2003208..2003335,2003405..2003627,2003734..>2003782))	Theileria orientalis strain Shintoku	20713696
TOT_010000827	mRNA	TOT_010000827	NC_025260.1	2004837	2005817	D	TOT_010000827	<2004837..>2005817	Theileria orientalis strain Shintoku	20713697
TOT_010000828	mRNA	TOT_010000828	NC_025260.1	2005939	2007924	R	TOT_010000828	complement(join(<2005939..2006002,2006045..2006173,2006372..>2007924))	Theileria orientalis strain Shintoku	20713698
TOT_010000829	mRNA	TOT_010000829	NC_025260.1	2008361	2009214	D	TOT_010000829	join(<2008361..2008456,2008500..2008593,2008625..2008959,2009092..>2009214)	Theileria orientalis strain Shintoku	20713699
TOT_010000830	mRNA	TOT_010000830	NC_025260.1	2009365	2010429	R	TOT_010000830	complement(join(<2009365..2010113,2010144..>2010429))	Theileria orientalis strain Shintoku	20713700
TOT_010000831	mRNA	TOT_010000831	NC_025260.1	2010623	2014871	D	TOT_010000831	join(<2010623..2010687,2011219..2012170,2012411..2012531,2012566..>2014871)	Theileria orientalis strain Shintoku	20713701
TOT_010000832	mRNA	TOT_010000832	NC_025260.1	2015411	2015890	D	TOT_010000832	<2015411..>2015890	Theileria orientalis strain Shintoku	20713702
TOT_010000833	mRNA	TOT_010000833	NC_025260.1	2016188	2016551	D	TOT_010000833	join(<2016188..2016264,2016359..2016455,2016486..>2016551)	Theileria orientalis strain Shintoku	20713703
TOT_010000834	mRNA	TOT_010000834	NC_025260.1	2016744	2017363	R	TOT_010000834	complement(join(<2016744..2016885,2016918..>2017363))	Theileria orientalis strain Shintoku	20713704
TOT_010001304	mRNA	TOT_010001304	NC_025260.1	2017816	2018517	D	TOT_010001304	<2017816..>2018517	Theileria orientalis strain Shintoku	20714103
TOT_010001305	mRNA	TOT_010001305	NC_025260.1	2019043	2019576	D	TOT_010001305	<2019043..>2019576	Theileria orientalis strain Shintoku	20714104
TOT_010000836	mRNA	TOT_010000836	NC_025260.1	2020635	2021174	D	TOT_010000836	<2020635..>2021174	Theileria orientalis strain Shintoku	20713705
TOT_010000837	mRNA	TOT_010000837	NC_025260.1	2021503	2021965	D	TOT_010000837	join(<2021503..2021733,2021765..>2021965)	Theileria orientalis strain Shintoku	20713706
TOT_010000838	mRNA	TOT_010000838	NC_025260.1	2022084	2024193	R	TOT_010000838	complement(join(<2022084..2022173,2022431..2022691,2022797..2022905,2022968..2023083,2023113..2023222,2023257..2023385,2023415..2023559,2023622..2023830,2023852..2023960,2024056..>2024193))	Theileria orientalis strain Shintoku	20713707
TOT_010000839	mRNA	TOT_010000839	NC_025260.1	2024446	2024933	R	TOT_010000839	complement(join(<2024446..2024542,2024578..2024676,2024727..2024782,2024931..>2024933))	Theileria orientalis strain Shintoku	20713708
TOT_010000840	mRNA	TOT_010000840	NC_025260.1	2027039	2027789	D	TOT_010000840	join(<2027039..2027436,2027453..>2027789)	Theileria orientalis strain Shintoku	20713709
TOT_010001306	mRNA	TOT_010001306	NC_025260.1	2028075	2030400	R	TOT_010001306	complement(join(<2028075..2028212,2028307..2028461,2028560..2028722,2028774..2028859,2029086..2029316,2029466..2029545,2029567..2029743,2029808..2029917,2029947..2030051,2030083..2030219,2030295..>2030400))	Theileria orientalis strain Shintoku	20714105
TOT_010000842	mRNA	TOT_010000842	NC_025260.1	2030718	2031136	D	TOT_010000842	join(<2030718..2030837,2030872..2030957,2030992..>2031136)	Theileria orientalis strain Shintoku	20713710
TOT_010000843	mRNA	TOT_010000843	NC_025260.1	2031146	2033700	R	TOT_010000843	complement(join(<2031146..2031261,2031310..2031352,2031385..2031598,2031681..2031783,2032085..2032308,2032399..2032527,2032567..2032746,2032846..2032882,2032934..2033117,2033151..2033236,2033326..2033369,2033657..>2033700))	Theileria orientalis strain Shintoku	20713711
TOT_010000844	mRNA	TOT_010000844	NC_025260.1	2033873	2036487	D	TOT_010000844	join(<2033873..2036418,2036439..>2036487)	Theileria orientalis strain Shintoku	20713712
TOT_010001307	mRNA	TOT_010001307	NC_025260.1	2036679	2037102	R	TOT_010001307	complement(join(<2036679..2036955,2036987..>2037102))	Theileria orientalis strain Shintoku	20714106
TOT_010000846	mRNA	TOT_010000846	NC_025260.1	2038066	2042883	D	TOT_010000846	join(<2038066..2038180,2038259..2038491,2038524..2038598,2038670..2039120,2039205..2039417,2039501..2039815,2039847..2039994,2040098..2040173,2040215..2040409,2040467..2040523,2040649..2040810,2040864..2040944,2041052..2041283,2041430..2041485,2041587..2041821,2041870..2041932,2042003..2042149,2042319..2042470,2042505..2042578,2042745..>2042883)	Theileria orientalis strain Shintoku	20713713
TOT_010000847	mRNA	TOT_010000847	NC_025260.1	2043044	2045340	R	TOT_010000847	complement(join(<2043044..2043058,2043075..2043425,2043589..2043672,2043775..>2045340))	Theileria orientalis strain Shintoku	20713714
TOT_010000848	mRNA	TOT_010000848	NC_025260.1	2045456	2046756	R	TOT_010000848	complement(join(<2045456..2046133,2046164..2046395,2046551..2046683,2046714..>2046756))	Theileria orientalis strain Shintoku	20713715
TOT_010000849	mRNA	TOT_010000849	NC_025260.1	2046969	2049847	R	TOT_010000849	complement(join(<2046969..2047163,2047194..2047517,2047584..2047931,2048237..2048419,2048452..2049645,2049707..>2049847))	Theileria orientalis strain Shintoku	20713716
TOT_010000850	mRNA	TOT_010000850	NC_025260.1	2050575	2050946	D	TOT_010000850	join(<2050575..2050689,2050732..>2050946)	Theileria orientalis strain Shintoku	20713717
TOT_010000851	mRNA	TOT_010000851	NC_025260.1	2050956	2053787	D	TOT_010000851	join(<2050956..2052124,2052197..>2053787)	Theileria orientalis strain Shintoku	20713718
TOT_010000852	mRNA	TOT_010000852	NC_025260.1	2054177	2056505	R	TOT_010000852	complement(join(<2054177..2054235,2054327..2054591,2054623..2054718,2054750..2055526,2055549..2055941,2056281..>2056505))	Theileria orientalis strain Shintoku	20713719
TOT_010001308	mRNA	TOT_010001308	NC_025260.1	2056746	2057593	R	TOT_010001308	complement(join(<2056746..2056915,2056964..2057302,2057335..>2057593))	Theileria orientalis strain Shintoku	20714107
TOT_010001309	mRNA	TOT_010001309	NC_025260.1	2057687	2058662	R	TOT_010001309	complement(join(<2057687..2057961,2057991..2058434,2058521..>2058662))	Theileria orientalis strain Shintoku	20714108
TOT_010000855	mRNA	TOT_010000855	NC_025260.1	2058728	2059350	D	TOT_010000855	join(<2058728..2058835,2058869..2058936,2058975..>2059350)	Theileria orientalis strain Shintoku	20713720
TOT_010001310	mRNA	TOT_010001310	NC_025260.1	2059549	2062426	D	TOT_010001310	join(<2059549..2060381,2060413..2060497,2060575..2060722,2060894..2061184,2061361..2061540,2061565..2061695,2061749..>2062426)	Theileria orientalis strain Shintoku	20714109
TOT_010000857	mRNA	TOT_010000857	NC_025260.1	2062765	2063190	D	TOT_010000857	<2062765..>2063190	Theileria orientalis strain Shintoku	20713721
TOT_010001311	mRNA	TOT_010001311	NC_025260.1	2063231	2063646	D	TOT_010001311	join(<2063231..2063548,2063581..>2063646)	Theileria orientalis strain Shintoku	20714110
TOT_010000859	mRNA	TOT_010000859	NC_025260.1	2063823	2064510	D	TOT_010000859	join(<2063823..2064239,2064391..>2064510)	Theileria orientalis strain Shintoku	20713722
TOT_010000860	mRNA	TOT_010000860	NC_025260.1	2064675	2065550	D	TOT_010000860	join(<2064675..2065022,2065053..2065198,2065316..>2065550)	Theileria orientalis strain Shintoku	20713723
TOT_010000861	mRNA	TOT_010000861	NC_025260.1	2065699	2066752	R	TOT_010000861	complement(join(<2065699..2065801,2065843..2065918,2066307..2066328,2066362..2066491,2066532..2066591,2066625..>2066752))	Theileria orientalis strain Shintoku	20713724
TOT_010000862	mRNA	TOT_010000862	NC_025260.1	2066964	2067377	D	TOT_010000862	<2066964..>2067377	Theileria orientalis strain Shintoku	20713725
TOT_010000863	mRNA	TOT_010000863	NC_025260.1	2067643	2069454	D	TOT_010000863	join(<2067643..2069345,2069403..>2069454)	Theileria orientalis strain Shintoku	20713726
TOT_010000864	mRNA	TOT_010000864	NC_025260.1	2069513	2073388	R	TOT_010000864	complement(join(<2069513..2072796,2073019..>2073388))	Theileria orientalis strain Shintoku	20713727
TOT_010000865	mRNA	TOT_010000865	NC_025260.1	2073709	2077513	R	TOT_010000865	complement(join(<2073709..2073728,2073813..2074524,2074726..2074824,2074857..2075110,2075165..2075441,2075657..>2077513))	Theileria orientalis strain Shintoku	20713728
TOT_010000866	mRNA	TOT_010000866	NC_025260.1	2077663	2084989	D	TOT_010000866	join(<2077663..2077884,2077921..2078145,2078202..2079172,2079207..2079275,2079545..2079938,2080042..2081589,2081656..2081715,2081905..2082085,2082156..2082354,2082405..2082499,2082543..2082614,2082851..2083275,2083321..2083584,2083684..2083803,2083844..2083914,2083949..2084134,2084278..2084411,2084513..2084570,2084602..2084727,2084758..>2084989)	Theileria orientalis strain Shintoku	20713729
TOT_010000867	mRNA	TOT_010000867	NC_025260.1	2085140	2086754	D	TOT_010000867	join(<2085140..2085268,2085330..2085369,2085410..2085552,2085584..2085672,2085703..2085892,2085972..2086210,2086243..2086375,2086547..2086593,2086640..>2086754)	Theileria orientalis strain Shintoku	20713730
TOT_010000868	mRNA	TOT_010000868	NC_025260.1	2086701	2087147	R	TOT_010000868	complement(join(<2086701..2086902,2087035..>2087147))	Theileria orientalis strain Shintoku	20713731
TOT_010000869	mRNA	TOT_010000869	NC_025260.1	2087181	2087738	R	TOT_010000869	complement(join(<2087181..2087378,2087446..2087594,2087729..>2087738))	Theileria orientalis strain Shintoku	20713732
TOT_010000870	mRNA	TOT_010000870	NC_025260.1	2088341	2090491	D	TOT_010000870	join(<2088341..2088707,2088742..2089045,2089091..2089229,2089261..2089446,2089510..2089682,2089788..2090151,2090189..>2090491)	Theileria orientalis strain Shintoku	20713733
TOT_010001312	mRNA	TOT_010001312	NC_025260.1	2090733	2091128	R	TOT_010001312	complement(join(<2090733..2090896,2090930..>2091128))	Theileria orientalis strain Shintoku	20714111
TOT_010000872	mRNA	TOT_010000872	NC_025260.1	2091669	2091812	D	TOT_010000872	<2091669..>2091812	Theileria orientalis strain Shintoku	20713734
TOT_010000873	mRNA	TOT_010000873	NC_025260.1	2091958	2092242	R	TOT_010000873	complement(join(<2091958..2091994,2092025..2092156,2092226..>2092242))	Theileria orientalis strain Shintoku	20713735
TOT_010001313	mRNA	TOT_010001313	NC_025260.1	2092405	2093263	R	TOT_010001313	complement(join(<2092405..2092527,2092641..2092730,2092761..2092865,2092897..2093008,2093039..2093109,2093198..>2093263))	Theileria orientalis strain Shintoku	20714112
TOT_010000875	mRNA	TOT_010000875	NC_025260.1	2093780	2094338	D	TOT_010000875	join(<2093780..2093944,2094105..>2094338)	Theileria orientalis strain Shintoku	20713736
TOT_010001314	mRNA	TOT_010001314	NC_025260.1	2094406	2095038	R	TOT_010001314	complement(<2094406..>2095038)	Theileria orientalis strain Shintoku	20714113
TOT_010000877	mRNA	TOT_010000877	NC_025260.1	2095945	2099501	D	TOT_010000877	join(<2095945..2097460,2097611..2097900,2098266..2098315,2098329..2098484,2098533..2098611,2098840..2099147,2099381..>2099501)	Theileria orientalis strain Shintoku	20713737
TOT_010000878	mRNA	TOT_010000878	NC_025260.1	2099537	2102195	D	TOT_010000878	join(<2099537..2099873,2099965..2100454,2100484..2100589,2100620..2100751,2100881..2101626,2101838..>2102195)	Theileria orientalis strain Shintoku	20713738
TOT_010001315	mRNA	TOT_010001315	NC_025260.1	2102465	2107111	R	TOT_010001315	complement(join(<2102465..2103047,2103288..2103961,2104079..2104570,2104994..2105571,2105725..>2107111))	Theileria orientalis strain Shintoku	20714114
TOT_010000880	mRNA	TOT_010000880	NC_025260.1	2107204	2107444	D	TOT_010000880	join(<2107204..2107208,2107264..>2107444)	Theileria orientalis strain Shintoku	20713739
TOT_010001316	mRNA	TOT_010001316	NC_025260.1	2107592	2110882	R	TOT_010001316	complement(join(<2107592..2108398,2108432..>2110882))	Theileria orientalis strain Shintoku	20714115
TOT_010001317	mRNA	TOT_010001317	NC_025260.1	2111288	2112781	D	TOT_010001317	join(<2111288..2111515,2111600..2112283,2112422..2112519,2112628..>2112781)	Theileria orientalis strain Shintoku	20714116
TOT_010001318	mRNA	TOT_010001318	NC_025260.1	2113171	2114946	D	TOT_010001318	join(<2113171..2113296,2113329..2113424,2113459..2113523,2113565..2113652,2113685..2113860,2113891..2113963,2113994..2114070,2114094..2114183,2114226..2114465,2114496..>2114946)	Theileria orientalis strain Shintoku	20714117
TOT_010001319	mRNA	TOT_010001319	NC_025260.1	2115418	2119107	D	TOT_010001319	join(<2115418..2116156,2116329..2116801,2116993..2117952,2118123..2118274,2118406..2118598,2118728..2118860,2118959..>2119107)	Theileria orientalis strain Shintoku	20714118
TOT_010000885	mRNA	TOT_010000885	NC_025260.1	2119455	2120459	D	TOT_010000885	<2119455..>2120459	Theileria orientalis strain Shintoku	20713740
TOT_010000886	mRNA	TOT_010000886	NC_025260.1	2120742	2123823	R	TOT_010000886	complement(join(<2120742..2121520,2121609..2121668,2121780..2121848,2122036..2122854,2123040..>2123823))	Theileria orientalis strain Shintoku	20713741
TOT_010000887	mRNA	TOT_010000887	NC_025260.1	2125018	2127346	D	TOT_010000887	join(<2125018..2125437,2125519..2126653,2126873..2127003,2127311..>2127346)	Theileria orientalis strain Shintoku	20713742
TOT_010000888	mRNA	TOT_010000888	NC_025260.1	2127496	2128425	D	TOT_010000888	<2127496..>2128425	Theileria orientalis strain Shintoku	20713743
TOT_010000889	mRNA	TOT_010000889	NC_025260.1	2128542	2129134	D	TOT_010000889	join(<2128542..2128752,2128857..>2129134)	Theileria orientalis strain Shintoku	20713744
TOT_010000890	mRNA	TOT_010000890	NC_025260.1	2129467	2131873	D	TOT_010000890	join(<2129467..2129532,2129601..2129744,2129778..2129818,2129906..2131272,2131337..2131416,2131554..2131648,2131771..>2131873)	Theileria orientalis strain Shintoku	20713745
TOT_010001320	mRNA	TOT_010001320	NC_025260.1	2132200	2133982	R	TOT_010001320	complement(join(<2132200..2132312,2132623..2132826,2132857..2132940,2133010..2133109,2133164..2133286,2133364..2133510,2133541..2133641,2133721..>2133982))	Theileria orientalis strain Shintoku	20714119
TOT_010000892	mRNA	TOT_010000892	NC_025260.1	2134260	2135971	R	TOT_010000892	complement(join(<2134260..2134349,2134685..2134804,2134910..2135041,2135073..2135218,2135336..2135470,2135503..2135596,2135637..2135709,2135765..2135868,2135951..>2135971))	Theileria orientalis strain Shintoku	20713746
TOT_010001321	mRNA	TOT_010001321	NC_025260.1	2136450	2137695	R	TOT_010001321	complement(join(<2136450..2136907,2136966..>2137695))	Theileria orientalis strain Shintoku	20714120
TOT_010000894	mRNA	TOT_010000894	NC_025260.1	2138658	2140628	R	TOT_010000894	complement(<2138658..>2140628)	Theileria orientalis strain Shintoku	20713747
TOT_010000895	mRNA	TOT_010000895	NC_025260.1	2141154	2142343	D	TOT_010000895	join(<2141154..2141185,2141203..2141299,2141349..2141449,2141539..2141717,2141749..2141886,2141940..2142013,2142076..2142143,2142199..>2142343)	Theileria orientalis strain Shintoku	20713748
TOT_010000896	mRNA	TOT_010000896	NC_025260.1	2142551	2143407	D	TOT_010000896	join(<2142551..2142859,2142955..>2143407)	Theileria orientalis strain Shintoku	20713749
TOT_010000897	mRNA	TOT_010000897	NC_025260.1	2143539	2144370	R	TOT_010000897	complement(join(<2143539..2144013,2144129..>2144370))	Theileria orientalis strain Shintoku	20713750
TOT_010000898	mRNA	TOT_010000898	NC_025260.1	2144778	2145155	D	TOT_010000898	<2144778..>2145155	Theileria orientalis strain Shintoku	20713751
TOT_010001322	mRNA	TOT_010001322	NC_025260.1	2145575	2147164	D	TOT_010001322	join(<2145575..2145914,2145946..2146060,2146133..2146293,2146401..2146576,2146705..2146816,2146917..2147015,2147058..>2147164)	Theileria orientalis strain Shintoku	20714121
TOT_010000900	mRNA	TOT_010000900	NC_025260.1	2147423	2148064	R	TOT_010000900	complement(join(<2147423..2147465,2147537..2147633,2147695..>2148064))	Theileria orientalis strain Shintoku	20713752
TOT_010000901	mRNA	TOT_010000901	NC_025260.1	2148531	2153731	D	TOT_010000901	join(<2148531..2148689,2148719..2149541,2149812..2151527,2151630..2153583,2153674..>2153731)	Theileria orientalis strain Shintoku	20713753
TOT_010001323	mRNA	TOT_010001323	NC_025260.1	2153836	2155807	D	TOT_010001323	join(<2153836..2153905,2153979..2154418,2154467..2154746,2154780..2154859,2154938..2155004,2155035..2155211,2155289..2155438,2155499..2155579,2155611..2155685,2155737..>2155807)	Theileria orientalis strain Shintoku	20714122
TOT_010001196	mRNA	TOT_010001196	NC_025260.1	2155855	2156878	D	TOT_010001196	join(<2155855..2155976,2156014..2156097,2156241..2156334,2156364..2156452,2156487..2156547,2156578..2156620,2156700..>2156878)	Theileria orientalis strain Shintoku	20713995
TOT_010001324	mRNA	TOT_010001324	NC_025260.1	2157163	2158761	D	TOT_010001324	join(<2157163..2157326,2157387..2157498,2157558..2157653,2157827..2158162,2158399..>2158761)	Theileria orientalis strain Shintoku	20714123
TOT_010000904	mRNA	TOT_010000904	NC_025260.1	2158896	2161999	R	TOT_010000904	complement(join(<2158896..2158992,2159134..2159773,2159978..2160413,2160448..2160509,2160555..2161011,2161081..2161356,2161388..2161530,2161562..2161798,2161831..>2161999))	Theileria orientalis strain Shintoku	20713754
TOT_010000905	mRNA	TOT_010000905	NC_025260.1	2162116	2164514	R	TOT_010000905	complement(join(<2162116..2162360,2162392..2162744,2162788..2162923,2162955..2163045,2163127..2163208,2163250..>2164514))	Theileria orientalis strain Shintoku	20713755
TOT_010001325	mRNA	TOT_010001325	NC_025260.1	2164580	2168130	R	TOT_010001325	complement(join(<2164580..2165571,2165977..2166433,2166602..2167807,2167843..>2168130))	Theileria orientalis strain Shintoku	20714124
TOT_010000907	mRNA	TOT_010000907	NC_025260.1	2168364	2169776	R	TOT_010000907	complement(<2168364..>2169776)	Theileria orientalis strain Shintoku	20713756
TOT_010000908	mRNA	TOT_010000908	NC_025260.1	2170127	2171329	R	TOT_010000908	complement(<2170127..>2171329)	Theileria orientalis strain Shintoku	20713757
TOT_010001326	mRNA	TOT_010001326	NC_025260.1	2171686	2174517	R	TOT_010001326	complement(join(<2171686..2173103,2173245..>2174517))	Theileria orientalis strain Shintoku	20714125
TOT_010000910	mRNA	TOT_010000910	NC_025260.1	2174981	2176870	D	TOT_010000910	join(<2174981..2175085,2175142..2175468,2175500..2175678,2175871..>2176870)	Theileria orientalis strain Shintoku	20713758
TOT_010000911	mRNA	TOT_010000911	NC_025260.1	2177252	2177474	R	TOT_010000911	complement(join(<2177252..2177301,2177333..>2177474))	Theileria orientalis strain Shintoku	20713759
TOT_010000912	mRNA	TOT_010000912	NC_025260.1	2177591	2178260	D	TOT_010000912	join(<2177591..2177746,2177886..>2178260)	Theileria orientalis strain Shintoku	20713760
TOT_010000913	mRNA	TOT_010000913	NC_025260.1	2178714	2179128	D	TOT_010000913	join(<2178714..2178716,2178760..>2179128)	Theileria orientalis strain Shintoku	20713761
TOT_010000914	mRNA	TOT_010000914	NC_025260.1	2179361	2180697	D	TOT_010000914	join(<2179361..2179411,2179498..>2180697)	Theileria orientalis strain Shintoku	20713762
TOT_010000915	mRNA	TOT_010000915	NC_025260.1	2180904	2181311	R	TOT_010000915	complement(<2180904..>2181311)	Theileria orientalis strain Shintoku	20713763
TOT_010000916	mRNA	TOT_010000916	NC_025260.1	2181594	2184068	D	TOT_010000916	<2181594..>2184068	Theileria orientalis strain Shintoku	20713764
TOT_010000917	mRNA	TOT_010000917	NC_025260.1	2184140	2184427	D	TOT_010000917	join(<2184140..2184221,2184324..>2184427)	Theileria orientalis strain Shintoku	20713765
TOT_010000918	mRNA	TOT_010000918	NC_025260.1	2184465	2185970	D	TOT_010000918	<2184465..>2185970	Theileria orientalis strain Shintoku	20713766
TOT_010000919	mRNA	TOT_010000919	NC_025260.1	2186434	2187401	R	TOT_010000919	complement(join(<2186434..2186512,2186548..2186646,2186679..2187149,2187181..2187283,2187314..>2187401))	Theileria orientalis strain Shintoku	20713767
TOT_010000920	mRNA	TOT_010000920	NC_025260.1	2187468	2188286	R	TOT_010000920	complement(<2187468..>2188286)	Theileria orientalis strain Shintoku	20713768
TOT_010000921	mRNA	TOT_010000921	NC_025260.1	2188760	2189180	D	TOT_010000921	join(<2188760..2188830,2188865..2188972,2189003..>2189180)	Theileria orientalis strain Shintoku	20713769
TOT_010000922	mRNA	TOT_010000922	NC_025260.1	2189333	2189866	R	TOT_010000922	complement(join(<2189333..2189436,2189474..2189720,2189762..>2189866))	Theileria orientalis strain Shintoku	20713770
TOT_010001327	mRNA	TOT_010001327	NC_025260.1	2190276	2190837	D	TOT_010001327	join(<2190276..2190297,2190330..2190575,2190609..2190667,2190700..>2190837)	Theileria orientalis strain Shintoku	20714126
TOT_010000924	mRNA	TOT_010000924	NC_025260.1	2191202	2192194	R	TOT_010000924	complement(<2191202..>2192194)	Theileria orientalis strain Shintoku	20713771
TOT_010001328	mRNA	TOT_010001328	NC_025260.1	2192667	2195498	R	TOT_010001328	complement(join(<2192667..2192721,2192793..2192940,2193083..2193298,2193566..2194169,2194335..2194816,2194885..2195048,2195080..>2195498))	Theileria orientalis strain Shintoku	20714127
TOT_010000926	mRNA	TOT_010000926	NC_025260.1	2196503	2196751	D	TOT_010000926	<2196503..>2196751	Theileria orientalis strain Shintoku	20713772
TOT_010000927	mRNA	TOT_010000927	NC_025260.1	2196767	2197610	R	TOT_010000927	complement(join(<2196767..2196963,2196993..2197078,2197109..2197287,2197319..2197423,2197530..>2197610))	Theileria orientalis strain Shintoku	20713773
TOT_010001329	mRNA	TOT_010001329	NC_025260.1	2198037	2202170	R	TOT_010001329	complement(join(<2198037..2198810,2199075..2199798,2200003..>2202170))	Theileria orientalis strain Shintoku	20714128
TOT_010000929	mRNA	TOT_010000929	NC_025260.1	2202330	2204661	D	TOT_010000929	join(<2202330..2202643,2202726..2202833,2202865..2203010,2203040..2203390,2203420..2203604,2203775..2203942,2204013..2204098,2204254..2204382,2204491..2204560,2204596..>2204661)	Theileria orientalis strain Shintoku	20713774
TOT_010000930	mRNA	TOT_010000930	NC_025260.1	2204853	2205535	R	TOT_010000930	complement(join(<2204853..2205055,2205094..2205234,2205302..2205373,2205475..>2205535))	Theileria orientalis strain Shintoku	20713775
TOT_010001330	mRNA	TOT_010001330	NC_025260.1	2205570	2207218	R	TOT_010001330	complement(join(<2205570..2205646,2205686..2205782,2205814..2205876,2205906..2205965,2206024..2206080,2206182..2206244,2206280..2206538,2206650..2206731,2206790..2206845,2206955..2207034,2207102..>2207218))	Theileria orientalis strain Shintoku	20714129
TOT_010000932	mRNA	TOT_010000932	NC_025260.1	2207402	2207854	D	TOT_010000932	join(<2207402..2207524,2207558..2207606,2207703..2207759,2207790..>2207854)	Theileria orientalis strain Shintoku	20713776
TOT_010000933	mRNA	TOT_010000933	NC_025260.1	2208021	2208426	R	TOT_010000933	complement(join(<2208021..2208184,2208246..>2208426))	Theileria orientalis strain Shintoku	20713777
TOT_010000934	mRNA	TOT_010000934	NC_025260.1	2208892	2209659	D	TOT_010000934	join(<2208892..2208952,2209014..2209109,2209201..2209276,2209413..>2209659)	Theileria orientalis strain Shintoku	20713778
TOT_010000935	mRNA	TOT_010000935	NC_025260.1	2210069	2213518	D	TOT_010000935	join(<2210069..2212162,2212622..2212993,2213258..>2213518)	Theileria orientalis strain Shintoku	20713779
TOT_010000936	mRNA	TOT_010000936	NC_025260.1	2213749	2215836	R	TOT_010000936	complement(join(<2213749..2213874,2214032..2214150,2214287..2214395,2214432..2214865,2214928..2215022,2215089..2215617,2215719..>2215836))	Theileria orientalis strain Shintoku	20713780
TOT_010000937	mRNA	TOT_010000937	NC_025260.1	2216130	2217480	D	TOT_010000937	join(<2216130..2216722,2216767..2217109,2217141..2217321,2217353..>2217480)	Theileria orientalis strain Shintoku	20713781
TOT_010000938	mRNA	TOT_010000938	NC_025260.1	2217512	2219381	D	TOT_010000938	join(<2217512..2217654,2217685..2217799,2217950..2218116,2218154..2218285,2218320..2218426,2218469..2218532,2218576..2218684,2218825..2218944,2219058..2219114,2219145..>2219381)	Theileria orientalis strain Shintoku	20713782
TOT_010000939	mRNA	TOT_010000939	NC_025260.1	2220247	2223480	D	TOT_010000939	<2220247..>2223480	Theileria orientalis strain Shintoku	20713783
TOT_010000940	mRNA	TOT_010000940	NC_025260.1	2223889	2226064	D	TOT_010000940	join(<2223889..2224672,2224847..2225900,2225998..>2226064)	Theileria orientalis strain Shintoku	20713784
TOT_010000941	mRNA	TOT_010000941	NC_025260.1	2226121	2227173	R	TOT_010000941	complement(join(<2226121..2226480,2226635..2226829,2226870..2226956,2227096..>2227173))	Theileria orientalis strain Shintoku	20713785
TOT_010000942	mRNA	TOT_010000942	NC_025260.1	2227723	2228792	D	TOT_010000942	join(<2227723..2227949,2228113..2228302,2228336..2228461,2228562..2228674,2228753..>2228792)	Theileria orientalis strain Shintoku	20713786
TOT_010000943	mRNA	TOT_010000943	NC_025260.1	2228862	2229234	D	TOT_010000943	join(<2228862..2228949,2229015..2229128,2229197..>2229234)	Theileria orientalis strain Shintoku	20713787
TOT_010001331	mRNA	TOT_010001331	NC_025260.1	2229388	2230460	R	TOT_010001331	complement(join(<2229388..2229996,2230098..>2230460))	Theileria orientalis strain Shintoku	20714130
TOT_010001332	mRNA	TOT_010001332	NC_025260.1	2230860	2231612	R	TOT_010001332	complement(<2230860..>2231612)	Theileria orientalis strain Shintoku	20714131
TOT_010000946	mRNA	TOT_010000946	NC_025260.1	2231734	2232302	D	TOT_010000946	join(<2231734..2231746,2231779..2231841,2231913..2232116,2232253..>2232302)	Theileria orientalis strain Shintoku	20713788
TOT_010000947	mRNA	TOT_010000947	NC_025260.1	2232339	2233025	R	TOT_010000947	complement(join(<2232339..2232631,2232691..2232899,2232952..>2233025))	Theileria orientalis strain Shintoku	20713789
TOT_010000948	mRNA	TOT_010000948	NC_025260.1	2233207	2234484	D	TOT_010000948	join(<2233207..2233296,2233328..2233493,2233536..2233608,2233657..2233754,2233810..2233877,2233908..2234190,2234357..>2234484)	Theileria orientalis strain Shintoku	20713790
TOT_010000949	mRNA	TOT_010000949	NC_025260.1	2234843	2236943	R	TOT_010000949	complement(join(<2234843..2235104,2235144..2235264,2235424..2236476,2236509..2236611,2236680..>2236943))	Theileria orientalis strain Shintoku	20713791
TOT_010001333	mRNA	TOT_010001333	NC_025260.1	2237357	2239660	D	TOT_010001333	join(<2237357..2237921,2237976..2239234,2239319..>2239660)	Theileria orientalis strain Shintoku	20714132
TOT_010000951	mRNA	TOT_010000951	NC_025260.1	2239890	2242014	R	TOT_010000951	complement(join(<2239890..2240435,2240583..2240842,2241039..>2242014))	Theileria orientalis strain Shintoku	20713792
TOT_010000952	mRNA	TOT_010000952	NC_025260.1	2242081	2243343	R	TOT_010000952	complement(join(<2242081..2242188,2242241..2242690,2242729..2242816,2242852..2242954,2242995..2243145,2243179..>2243343))	Theileria orientalis strain Shintoku	20713793
TOT_010000953	mRNA	TOT_010000953	NC_025260.1	2243446	2246935	R	TOT_010000953	complement(join(<2243446..2243501,2243607..2243958,2244170..2244475,2244620..2245071,2245180..>2246935))	Theileria orientalis strain Shintoku	20713794
TOT_010000954	mRNA	TOT_010000954	NC_025260.1	2247519	2249989	D	TOT_010000954	join(<2247519..2247892,2247928..2248304,2248406..2248464,2248516..2248611,2248638..2248944,2248980..2249312,2249520..>2249989)	Theileria orientalis strain Shintoku	20713795
TOT_010000955	mRNA	TOT_010000955	NC_025260.1	2250448	2251650	R	TOT_010000955	complement(<2250448..>2251650)	Theileria orientalis strain Shintoku	20713796
TOT_010001334	mRNA	TOT_010001334	NC_025260.1	2251827	2253542	R	TOT_010001334	complement(<2251827..>2253542)	Theileria orientalis strain Shintoku	20714133
TOT_010000957	mRNA	TOT_010000957	NC_025260.1	2253796	2255250	D	TOT_010000957	join(<2253796..2253825,2253864..2254738,2254878..>2255250)	Theileria orientalis strain Shintoku	20713797
TOT_010000958	mRNA	TOT_010000958	NC_025260.1	2255364	2257352	D	TOT_010000958	join(<2255364..2255600,2255633..2255762,2255804..2255999,2256022..2256166,2256199..2256309,2256345..2256721,2256893..>2257352)	Theileria orientalis strain Shintoku	20713798
TOT_010000959	mRNA	TOT_010000959	NC_025260.1	2257638	2259132	R	TOT_010000959	complement(join(<2257638..2258774,2258863..>2259132))	Theileria orientalis strain Shintoku	20713799
TOT_010000960	mRNA	TOT_010000960	NC_025260.1	2259279	2260595	R	TOT_010000960	complement(join(<2259279..2259595,2259633..2259824,2259850..2260443,2260568..>2260595))	Theileria orientalis strain Shintoku	20713800
TOT_010000961	mRNA	TOT_010000961	NC_025260.1	2260650	2261425	D	TOT_010000961	join(<2260650..2260829,2260914..2261043,2261082..>2261425)	Theileria orientalis strain Shintoku	20713801
TOT_010000962	mRNA	TOT_010000962	NC_025260.1	2261496	2262510	D	TOT_010000962	join(<2261496..2261721,2261780..2261851,2261881..2261981,2262028..>2262510)	Theileria orientalis strain Shintoku	20713802
TOT_010000963	mRNA	TOT_010000963	NC_025260.1	2262554	2263482	D	TOT_010000963	join(<2262554..2262743,2262780..2262860,2262925..2262986,2263068..2263098,2263209..2263283,2263334..>2263482)	Theileria orientalis strain Shintoku	20713803
TOT_010001335	mRNA	TOT_010001335	NC_025260.1	2263562	2265327	R	TOT_010001335	complement(join(<2263562..2264112,2264151..2264286,2264337..2264577,2264610..2264713,2264738..2264913,2264946..>2265327))	Theileria orientalis strain Shintoku	20714134
TOT_010000965	mRNA	TOT_010000965	NC_025260.1	2265826	2268102	D	TOT_010000965	<2265826..>2268102	Theileria orientalis strain Shintoku	20713804
TOT_010000966	mRNA	TOT_010000966	NC_025260.1	2268372	2270602	R	TOT_010000966	complement(join(<2268372..2270512,2270545..>2270602))	Theileria orientalis strain Shintoku	20713805
TOT_010000967	mRNA	TOT_010000967	NC_025260.1	2270778	2271899	R	TOT_010000967	complement(join(<2270778..2271049,2271081..2271254,2271286..2271570,2271606..2271731,2271764..>2271899))	Theileria orientalis strain Shintoku	20713806
TOT_010000968	mRNA	TOT_010000968	NC_025260.1	2272288	2277183	D	TOT_010000968	join(<2272288..2272597,2272630..2272764,2272794..2276063,2276323..2276557,2276633..2276951,2277103..>2277183)	Theileria orientalis strain Shintoku	20713807
TOT_010000969	mRNA	TOT_010000969	NC_025260.1	2277376	2278821	R	TOT_010000969	complement(join(<2277376..2277717,2277851..2278006,2278039..>2278821))	Theileria orientalis strain Shintoku	20713808
TOT_010001336	mRNA	TOT_010001336	NC_025260.1	2279032	2280004	D	TOT_010001336	join(<2279032..2279243,2279328..2279418,2279464..2279595,2279672..2279833,2279903..>2280004)	Theileria orientalis strain Shintoku	20714135
TOT_010001337	mRNA	TOT_010001337	NC_025260.1	2280048	2282394	D	TOT_010001337	join(<2280048..2280152,2280396..2280496,2280529..2281582,2281657..2281882,2281918..2282094,2282126..>2282394)	Theileria orientalis strain Shintoku	20714136
TOT_010000972	mRNA	TOT_010000972	NC_025260.1	2282511	2283881	R	TOT_010000972	complement(join(<2282511..2282737,2282891..>2283881))	Theileria orientalis strain Shintoku	20713809
TOT_010000973	mRNA	TOT_010000973	NC_025260.1	2284317	2285936	R	TOT_010000973	complement(join(<2284317..2284632,2284673..2285631,2285742..>2285936))	Theileria orientalis strain Shintoku	20713810
TOT_010001338	mRNA	TOT_010001338	NC_025260.1	2286493	2286804	D	TOT_010001338	join(<2286493..2286555,2286589..>2286804)	Theileria orientalis strain Shintoku	20714137
TOT_010000975	mRNA	TOT_010000975	NC_025260.1	2288171	2295639	D	TOT_010000975	join(<2288171..2293045,2293193..2293634,2293953..2294293,2294328..2295073,2295105..>2295639)	Theileria orientalis strain Shintoku	20713811
TOT_010000976	mRNA	TOT_010000976	NC_025260.1	2295677	2296966	D	TOT_010000976	join(<2295677..2295842,2295879..>2296966)	Theileria orientalis strain Shintoku	20713812
TOT_010000977	mRNA	TOT_010000977	NC_025260.1	2297140	2297835	D	TOT_010000977	join(<2297140..2297286,2297328..2297480,2297551..>2297835)	Theileria orientalis strain Shintoku	20713813
TOT_010000978	mRNA	TOT_010000978	NC_025260.1	2297977	2300212	D	TOT_010000978	join(<2297977..2298203,2298262..2298446,2298476..2298940,2298972..2299296,2299514..2299841,2299955..>2300212)	Theileria orientalis strain Shintoku	20713814
TOT_010001339	mRNA	TOT_010001339	NC_025260.1	2300207	2301295	R	TOT_010001339	complement(<2300207..>2301295)	Theileria orientalis strain Shintoku	20714138
TOT_010000980	mRNA	TOT_010000980	NC_025260.1	2301568	2303345	D	TOT_010000980	join(<2301568..2303105,2303168..>2303345)	Theileria orientalis strain Shintoku	20713815
TOT_010001340	mRNA	TOT_010001340	NC_025260.1	2303362	2303660	R	TOT_010001340	complement(join(<2303362..2303434,2303464..>2303660))	Theileria orientalis strain Shintoku	20714139
TOT_010000982	mRNA	TOT_010000982	NC_025260.1	2303738	2305469	R	TOT_010000982	complement(join(<2303738..2303836,2303887..2304012,2304042..2304178,2304407..2304665,2304727..2304813,2304932..2305221,2305259..>2305469))	Theileria orientalis strain Shintoku	20713816
TOT_010000983	mRNA	TOT_010000983	NC_025260.1	2305795	2311704	D	TOT_010000983	join(<2305795..2307582,2307718..2309593,2309672..2310085,2310332..2311281,2311450..>2311704)	Theileria orientalis strain Shintoku	20713817
TOT_010001341	mRNA	TOT_010001341	NC_025260.1	2311983	2312344	D	TOT_010001341	join(<2311983..2312063,2312096..2312192,2312229..>2312344)	Theileria orientalis strain Shintoku	20714140
TOT_010001342	mRNA	TOT_010001342	NC_025260.1	2313050	2313623	D	TOT_010001342	join(<2313050..2313208,2313241..2313458,2313491..>2313623)	Theileria orientalis strain Shintoku	20714141
TOT_010001343	mRNA	TOT_010001343	NC_025260.1	2314016	2322694	D	TOT_010001343	join(<2314016..2314162,2314189..2314456,2314489..2314728,2314769..2314993,2315026..2315442,2315469..2315855,2315890..2319862,2320040..2321428,2321575..>2322694)	Theileria orientalis strain Shintoku	20714142
TOT_010000987	mRNA	TOT_010000987	NC_025260.1	2322743	2331311	R	TOT_010000987	complement(join(<2322743..2323267,2323319..2323976,2324123..2324800,2324882..2325333,2325496..2325511,2325707..2326442,2326659..2327179,2327210..2327318,2327409..2328213,2328245..2329458,2329495..2329810,2329844..2330196,2330229..2330378,2330408..2330542,2330573..2330902,2330935..2331018,2331296..>2331311))	Theileria orientalis strain Shintoku	20713818
TOT_010000988	mRNA	TOT_010000988	NC_025260.1	2331885	2334291	D	TOT_010000988	join(<2331885..2332281,2332314..2332464,2332499..2332667,2332698..2332785,2332817..2332953,2332986..2333107,2333142..2333219,2333316..2333720,2333756..2334045,2334080..>2334291)	Theileria orientalis strain Shintoku	20713819
TOT_010000989	mRNA	TOT_010000989	NC_025260.1	2334754	2336332	D	TOT_010000989	join(<2334754..2335049,2335082..2335333,2335364..2335506,2335616..2335692,2335734..2335800,2335939..2336096,2336129..>2336332)	Theileria orientalis strain Shintoku	20713820
TOT_010000990	mRNA	TOT_010000990	NC_025260.1	2336519	2337131	R	TOT_010000990	complement(join(<2336519..2336693,2336725..>2337131))	Theileria orientalis strain Shintoku	20713821
TOT_010000991	mRNA	TOT_010000991	NC_025260.1	2337518	2341409	D	TOT_010000991	join(<2337518..2338741,2338829..2339564,2339632..2339731,2339855..2339905,2339939..2340369,2340626..2340704,2340789..2340942,2341089..>2341409)	Theileria orientalis strain Shintoku	20713822
TOT_010000992	mRNA	TOT_010000992	NC_025260.1	2341603	2345568	R	TOT_010000992	complement(join(<2341603..2341665,2341867..2342122,2342409..2342748,2342931..2343519,2343658..2343833,2343909..2344617,2344776..2345046,2345106..2345210,2345333..>2345568))	Theileria orientalis strain Shintoku	20713823
TOT_010000993	mRNA	TOT_010000993	NC_025260.1	2346148	2347047	R	TOT_010000993	complement(join(<2346148..2346905,2347029..>2347047))	Theileria orientalis strain Shintoku	20713824
TOT_010000994	mRNA	TOT_010000994	NC_025260.1	2347572	2348596	R	TOT_010000994	complement(join(<2347572..2347724,2347763..2347888,2347967..2348023,2348074..2348450,2348533..>2348596))	Theileria orientalis strain Shintoku	20713825
TOT_010000995	mRNA	TOT_010000995	NC_025260.1	2348666	2351006	R	TOT_010000995	complement(join(<2348666..2349281,2349359..2349414,2349450..2349518,2349557..2349670,2349774..>2351006))	Theileria orientalis strain Shintoku	20713826
TOT_010001344	mRNA	TOT_010001344	NC_025260.1	2351675	2354145	D	TOT_010001344	join(<2351675..2352114,2352145..2352221,2352249..2352489,2352529..2352683,2352725..2352849,2352881..2353717,2353797..2354078,2354110..>2354145)	Theileria orientalis strain Shintoku	20714143
TOT_010001345	mRNA	TOT_010001345	NC_025260.1	2354502	2357001	D	TOT_010001345	join(<2354502..2354855,2354934..2355924,2356064..2356287,2356408..>2357001)	Theileria orientalis strain Shintoku	20714144
TOT_010000998	mRNA	TOT_010000998	NC_025260.1	2357407	2359284	R	TOT_010000998	complement(join(<2357407..2357439,2357521..2357588,2357621..2357709,2357741..2357847,2357879..2358265,2358298..2358527,2358653..2358716,2358748..2358912,2359141..>2359284))	Theileria orientalis strain Shintoku	20713827
TOT_010000999	mRNA	TOT_010000999	NC_025260.1	2359844	2360695	D	TOT_010000999	<2359844..>2360695	Theileria orientalis strain Shintoku	20713828
TOT_010001000	mRNA	TOT_010001000	NC_025260.1	2360924	2361519	R	TOT_010001000	complement(join(<2360924..2361018,2361045..>2361519))	Theileria orientalis strain Shintoku	20713829
TOT_010001001	mRNA	TOT_010001001	NC_025260.1	2361835	2363852	R	TOT_010001001	complement(join(<2361835..2362519,2362592..2363362,2363403..2363514,2363741..>2363852))	Theileria orientalis strain Shintoku	20713830
TOT_010001002	mRNA	TOT_010001002	NC_025260.1	2364322	2367024	R	TOT_010001002	complement(join(<2364322..2364545,2364577..2364794,2364827..2364903,2364975..2365413,2365550..2365662,2365695..2365781,2365814..2365957,2365991..2366183,2366241..2366614,2366649..2366835,2366879..>2367024))	Theileria orientalis strain Shintoku	20713831
TOT_010001003	mRNA	TOT_010001003	NC_025260.1	2367323	2368866	R	TOT_010001003	complement(join(<2367323..2367373,2367415..2367564,2367595..2367693,2367725..2367847,2367889..2367977,2368008..2368179,2368220..2368513,2368547..2368672,2368714..>2368866))	Theileria orientalis strain Shintoku	20713832
TOT_010001346	mRNA	TOT_010001346	NC_025260.1	2368987	2370601	D	TOT_010001346	join(<2368987..2369112,2369172..2369422,2369460..2369574,2369604..2369671,2369705..2369873,2369964..2370096,2370129..>2370601)	Theileria orientalis strain Shintoku	20714145
TOT_010001347	mRNA	TOT_010001347	NC_025260.1	2370988	2372341	R	TOT_010001347	complement(join(<2370988..2371164,2371269..2371338,2371370..2371608,2371640..2371702,2371732..2371850,2371885..2371998,2372031..2372103,2372141..>2372341))	Theileria orientalis strain Shintoku	20714146
TOT_010001006	mRNA	TOT_010001006	NC_025260.1	2372413	2373737	R	TOT_010001006	complement(join(<2372413..2372467,2372596..2372711,2372749..2372835,2372865..2373365,2373398..2373544,2373582..2373639,2373670..>2373737))	Theileria orientalis strain Shintoku	20713833
TOT_010001007	mRNA	TOT_010001007	NC_025260.1	2374397	2376715	R	TOT_010001007	complement(<2374397..>2376715)	Theileria orientalis strain Shintoku	20713834
TOT_010001008	mRNA	TOT_010001008	NC_025260.1	2376876	2379704	R	TOT_010001008	complement(<2376876..>2379704)	Theileria orientalis strain Shintoku	20713835
TOT_010001009	mRNA	TOT_010001009	NC_025260.1	2380243	2382352	R	TOT_010001009	complement(join(<2380243..2380500,2380532..2380688,2380721..2380848,2380916..2380981,2381013..2381205,2381317..2381435,2381466..2381610,2381643..>2382352))	Theileria orientalis strain Shintoku	20713836
TOT_010001010	mRNA	TOT_010001010	NC_025260.1	2382823	2384057	D	TOT_010001010	join(<2382823..2382897,2382942..2383307,2383488..>2384057)	Theileria orientalis strain Shintoku	20713837
TOT_010001011	mRNA	TOT_010001011	NC_025260.1	2384250	2386509	R	TOT_010001011	complement(join(<2384250..2384405,2384497..2384673,2384756..2385047,2385080..2385648,2385679..>2386509))	Theileria orientalis strain Shintoku	20713838
TOT_010001012	mRNA	TOT_010001012	NC_025260.1	2386825	2388140	D	TOT_010001012	join(<2386825..2386930,2386967..2387118,2387148..2387250,2387281..2387402,2387451..2387570,2387604..2387763,2387865..2388010,2388048..>2388140)	Theileria orientalis strain Shintoku	20713839
TOT_010001013	mRNA	TOT_010001013	NC_025260.1	2389020	2390136	D	TOT_010001013	join(<2389020..2389101,2389137..2389345,2389376..2389508,2389547..>2390136)	Theileria orientalis strain Shintoku	20713840
TOT_010001014	mRNA	TOT_010001014	NC_025260.1	2390692	2391804	R	TOT_010001014	complement(<2390692..>2391804)	Theileria orientalis strain Shintoku	20713841
TOT_010001015	mRNA	TOT_010001015	NC_025260.1	2392477	2392629	D	TOT_010001015	<2392477..>2392629	Theileria orientalis strain Shintoku	20713842
TOT_010001016	mRNA	TOT_010001016	NC_025260.1	2393097	2393492	R	TOT_010001016	complement(<2393097..>2393492)	Theileria orientalis strain Shintoku	20713843
TOT_010001017	mRNA	TOT_010001017	NC_025260.1	2393879	2395395	D	TOT_010001017	join(<2393879..2394088,2394107..2394444,2394524..2394773,2394814..2395279,2395316..>2395395)	Theileria orientalis strain Shintoku	20713844
TOT_010001018	mRNA	TOT_010001018	NC_025260.1	2395574	2397064	D	TOT_010001018	join(<2395574..2395714,2395759..2395894,2395928..2396052,2396084..2396184,2396223..2396418,2396447..2396652,2396679..2396754,2396784..2396925,2396961..>2397064)	Theileria orientalis strain Shintoku	20713845
TOT_010001019	mRNA	TOT_010001019	NC_025260.1	2397453	2399339	D	TOT_010001019	join(<2397453..2398185,2398467..2398633,2398665..2398925,2398956..>2399339)	Theileria orientalis strain Shintoku	20713846
TOT_010001020	mRNA	TOT_010001020	NC_025260.1	2399957	2402120	D	TOT_010001020	join(<2399957..2400119,2400154..2400594,2401068..2401256,2401290..2401489,2402070..>2402120)	Theileria orientalis strain Shintoku	20713847
TOT_010001348	mRNA	TOT_010001348	NC_025260.1	2402559	2402972	R	TOT_010001348	complement(<2402559..>2402972)	Theileria orientalis strain Shintoku	20714147
TOT_010001349	mRNA	TOT_010001349	NC_025260.1	2403105	2404390	R	TOT_010001349	complement(join(<2403105..2403183,2403221..2403574,2403612..>2404390))	Theileria orientalis strain Shintoku	20714148
TOT_010001023	mRNA	TOT_010001023	NC_025260.1	2404799	2406936	D	TOT_010001023	join(<2404799..2404961,2406070..2406228,2406263..>2406936)	Theileria orientalis strain Shintoku	20713848
TOT_010001024	mRNA	TOT_010001024	NC_025260.1	2407260	2408197	D	TOT_010001024	join(<2407260..2407488,2407521..>2408197)	Theileria orientalis strain Shintoku	20713849
TOT_010001025	mRNA	TOT_010001025	NC_025260.1	2408797	2412412	D	TOT_010001025	join(<2408797..2408923,2408955..2409615,2409880..2411312,2411367..2411840,2411886..>2412412)	Theileria orientalis strain Shintoku	20713850
TOT_010001026	mRNA	TOT_010001026	NC_025260.1	2412629	2413623	R	TOT_010001026	complement(join(<2412629..2412850,2412884..2413003,2413139..2413297,2413327..2413430,2413460..2413512,2413571..>2413623))	Theileria orientalis strain Shintoku	20713851
TOT_010001350	mRNA	TOT_010001350	NC_025260.1	2414308	2415028	D	TOT_010001350	join(<2414308..2414453,2414522..2414811,2414853..>2415028)	Theileria orientalis strain Shintoku	20714149
TOT_010001028	mRNA	TOT_010001028	NC_025260.1	2415099	2420376	D	TOT_010001028	join(<2415099..2415150,2415203..2416178,2416251..2416645,2416720..2416880,2416915..2417178,2417353..2417460,2417491..2417599,2417758..2418078,2418295..2418751,2418896..2419002,2419048..2419319,2419537..2419621,2419774..2420117,2420308..>2420376)	Theileria orientalis strain Shintoku	20713852
TOT_010001029	mRNA	TOT_010001029	NC_025260.1	2420483	2421240	R	TOT_010001029	complement(join(<2420483..2421060,2421177..>2421240))	Theileria orientalis strain Shintoku	20713853
TOT_010001030	mRNA	TOT_010001030	NC_025260.1	2421489	2422693	D	TOT_010001030	join(<2421489..2421963,2421995..2422171,2422209..>2422693)	Theileria orientalis strain Shintoku	20713854
TOT_010001197	mRNA	TOT_010001197	NC_025260.1	2423080	2424900	D	TOT_010001197	join(<2423080..2424189,2424250..>2424900)	Theileria orientalis strain Shintoku	20713996
TOT_010001031	mRNA	TOT_010001031	NC_025260.1	2425472	2427130	D	TOT_010001031	join(<2425472..2425561,2425683..2425728,2425760..2425913,2426024..2426273,2426416..2426517,2426717..2426773,2426807..>2427130)	Theileria orientalis strain Shintoku	20713855
TOT_010001351	mRNA	TOT_010001351	NC_025260.1	2427356	2429273	R	TOT_010001351	complement(join(<2427356..2427491,2427553..2427876,2428028..2428120,2428214..2428432,2428472..2428528,2428559..2428685,2428916..>2429273))	Theileria orientalis strain Shintoku	20714150
TOT_010001352	mRNA	TOT_010001352	NC_025260.1	2429344	2431094	R	TOT_010001352	complement(join(<2429344..2429501,2429606..2429786,2429818..2429946,2429978..2430121,2430152..2430346,2430365..2430494,2430526..2430641,2430736..2430816,2430858..>2431094))	Theileria orientalis strain Shintoku	20714151
TOT_010001034	mRNA	TOT_010001034	NC_025260.1	2431398	2433262	D	TOT_010001034	join(<2431398..2431629,2431661..2431834,2431926..2432777,2432867..2432972,2433097..>2433262)	Theileria orientalis strain Shintoku	20713856
TOT_010001035	mRNA	TOT_010001035	NC_025260.1	2433259	2433396	R	TOT_010001035	complement(<2433259..>2433396)	Theileria orientalis strain Shintoku	20713857
TOT_010001036	mRNA	TOT_010001036	NC_025260.1	2433434	2434334	R	TOT_010001036	complement(join(<2433434..2433867,2434043..>2434334))	Theileria orientalis strain Shintoku	20713858
TOT_010001037	mRNA	TOT_010001037	NC_025260.1	2434914	2438381	D	TOT_010001037	join(<2434914..2436920,2437013..2437165,2437258..2437306,2437397..2437455,2437549..2437629,2437691..2437725,2437804..2438074,2438174..2438245,2438328..>2438381)	Theileria orientalis strain Shintoku	20713859
TOT_010001038	mRNA	TOT_010001038	NC_025260.1	2438607	2439838	D	TOT_010001038	join(<2438607..2438684,2438805..2438845,2438907..2439018,2439088..2439193,2439223..2439317,2439455..2439541,2439574..2439699,2439734..>2439838)	Theileria orientalis strain Shintoku	20713860
TOT_010001353	mRNA	TOT_010001353	NC_025260.1	2440113	2441263	D	TOT_010001353	join(<2440113..2440658,2440767..2440926,2440960..2441050,2441098..>2441263)	Theileria orientalis strain Shintoku	20714152
TOT_010001040	mRNA	TOT_010001040	NC_025260.1	2441462	2443097	D	TOT_010001040	join(<2441462..2441538,2441767..2441863,2441972..2442070,2442079..2442265,2442270..2442372,2442406..2442455,2442510..2442600,2442723..2442814,2442885..2442942,2443040..>2443097)	Theileria orientalis strain Shintoku	20713861
TOT_010001041	mRNA	TOT_010001041	NC_025260.1	2443248	2445317	D	TOT_010001041	join(<2443248..2443474,2443618..2444124,2444269..2444809,2444953..2445095,2445233..>2445317)	Theileria orientalis strain Shintoku	20713862
TOT_010001042	mRNA	TOT_010001042	NC_025260.1	2445408	2446353	D	TOT_010001042	join(<2445408..2445525,2445696..2445847,2446039..>2446353)	Theileria orientalis strain Shintoku	20713863
TOT_010001043	mRNA	TOT_010001043	NC_025260.1	2446624	2448405	R	TOT_010001043	complement(<2446624..>2448405)	Theileria orientalis strain Shintoku	20713864
TOT_010001044	mRNA	TOT_010001044	NC_025260.1	2448615	2450081	R	TOT_010001044	complement(<2448615..>2450081)	Theileria orientalis strain Shintoku	20713865
TOT_010001045	mRNA	TOT_010001045	NC_025260.1	2450905	2451996	R	TOT_010001045	complement(join(<2450905..2451695,2451756..>2451996))	Theileria orientalis strain Shintoku	20713866
TOT_010001046	mRNA	TOT_010001046	NC_025260.1	2452977	2458202	D	TOT_010001046	join(<2452977..2453336,2453404..2453689,2453758..2454748,2454818..2455006,2455067..2456141,2456281..2456459,2456536..2456734,2456804..2457241,2457306..>2458202)	Theileria orientalis strain Shintoku	20713867
TOT_010001047	mRNA	TOT_010001047	NC_025260.1	2458486	2461470	D	TOT_010001047	<2458486..>2461470	Theileria orientalis strain Shintoku	20713868
TOT_010001048	mRNA	TOT_010001048	NC_025260.1	2462075	2464157	D	TOT_010001048	join(<2462075..2462185,2462274..2462328,2462467..2462721,2462779..2462823,2462890..>2464157)	Theileria orientalis strain Shintoku	20713869
TOT_010001049	mRNA	TOT_010001049	NC_025260.1	2464584	2465773	D	TOT_010001049	join(<2464584..2464688,2464710..2464853,2464904..2465010,2465052..2465570,2465710..>2465773)	Theileria orientalis strain Shintoku	20713870
TOT_010001050	mRNA	TOT_010001050	NC_025260.1	2465789	2468272	R	TOT_010001050	complement(<2465789..>2468272)	Theileria orientalis strain Shintoku	20713871
TOT_010001051	mRNA	TOT_010001051	NC_025260.1	2468622	2469891	D	TOT_010001051	join(<2468622..2468668,2468754..>2469891)	Theileria orientalis strain Shintoku	20713872
TOT_010001052	mRNA	TOT_010001052	NC_025260.1	2469930	2471189	R	TOT_010001052	complement(<2469930..>2471189)	Theileria orientalis strain Shintoku	20713873
TOT_010001053	mRNA	TOT_010001053	NC_025260.1	2471706	2473421	D	TOT_010001053	join(<2471706..2472129,2472193..2472769,2472812..>2473421)	Theileria orientalis strain Shintoku	20713874
TOT_010001054	mRNA	TOT_010001054	NC_025260.1	2473625	2476106	D	TOT_010001054	join(<2473625..2474286,2474460..2474806,2474924..2475243,2475439..2475549,2475765..>2476106)	Theileria orientalis strain Shintoku	20713875
TOT_010001055	mRNA	TOT_010001055	NC_025260.1	2476393	2477923	R	TOT_010001055	complement(join(<2476393..2476760,2476899..2476972,2477038..2477168,2477258..>2477923))	Theileria orientalis strain Shintoku	20713876
TOT_010001056	mRNA	TOT_010001056	NC_025260.1	2478168	2478515	D	TOT_010001056	<2478168..>2478515	Theileria orientalis strain Shintoku	20713877
TOT_010001057	mRNA	TOT_010001057	NC_025260.1	2479023	2482620	D	TOT_010001057	join(<2479023..2482310,2482399..>2482620)	Theileria orientalis strain Shintoku	20713878
TOT_010001058	mRNA	TOT_010001058	NC_025260.1	2482761	2483224	R	TOT_010001058	complement(join(<2482761..2482933,2482969..>2483224))	Theileria orientalis strain Shintoku	20713879
TOT_010001059	mRNA	TOT_010001059	NC_025260.1	2483920	2484822	D	TOT_010001059	join(<2483920..2484613,2484776..>2484822)	Theileria orientalis strain Shintoku	20713880
TOT_010001060	mRNA	TOT_010001060	NC_025260.1	2484869	2485567	R	TOT_010001060	complement(join(<2484869..2484937,2484991..2485025,2485057..2485154,2485215..2485279,2485312..2485400,2485435..>2485567))	Theileria orientalis strain Shintoku	20713881
TOT_010001061	mRNA	TOT_010001061	NC_025260.1	2485923	2487067	R	TOT_010001061	complement(join(<2485923..2486963,2486996..>2487067))	Theileria orientalis strain Shintoku	20713882
TOT_010001354	mRNA	TOT_010001354	NC_025260.1	2487658	2489835	R	TOT_010001354	complement(join(<2487658..2488379,2488422..2488773,2488855..2489086,2489162..>2489835))	Theileria orientalis strain Shintoku	20714153
TOT_010001063	mRNA	TOT_010001063	NC_025260.1	2490302	2492018	D	TOT_010001063	join(<2490302..2490407,2490871..2491458,2491488..2491863,2491895..>2492018)	Theileria orientalis strain Shintoku	20713883
TOT_010001064	mRNA	TOT_010001064	NC_025260.1	2492097	2493913	D	TOT_010001064	join(<2492097..2492366,2492550..2492651,2492782..2492911,2493066..>2493913)	Theileria orientalis strain Shintoku	20713884
TOT_010001065	mRNA	TOT_010001065	NC_025260.1	2494240	2497242	D	TOT_010001065	join(<2494240..2495742,2495947..>2497242)	Theileria orientalis strain Shintoku	20713885
TOT_010001066	mRNA	TOT_010001066	NC_025260.1	2497510	2500293	R	TOT_010001066	complement(join(<2497510..2497634,2497872..2498633,2498828..2499376,2499438..>2500293))	Theileria orientalis strain Shintoku	20713886
TOT_010001067	mRNA	TOT_010001067	NC_025260.1	2500875	2502283	D	TOT_010001067	join(<2500875..2501343,2501381..2501442,2501473..2501574,2501615..2501786,2501816..2501899,2501973..2502118,2502188..>2502283)	Theileria orientalis strain Shintoku	20713887
TOT_010001355	mRNA	TOT_010001355	NC_025260.1	2502377	2505436	R	TOT_010001355	complement(join(<2502377..2503053,2503106..2503169,2503202..2503395,2503474..2503633,2503668..2503768,2503812..2503890,2503950..2504097,2504161..2504264,2504303..>2505436))	Theileria orientalis strain Shintoku	20714154
TOT_010001069	mRNA	TOT_010001069	NC_025260.1	2506103	2506451	D	TOT_010001069	join(<2506103..2506214,2506269..2506334,2506411..>2506451)	Theileria orientalis strain Shintoku	20713888
TOT_010001070	mRNA	TOT_010001070	NC_025260.1	2506615	2508597	R	TOT_010001070	complement(join(<2506615..2507842,2507987..>2508597))	Theileria orientalis strain Shintoku	20713889
TOT_010001071	mRNA	TOT_010001071	NC_025260.1	2509540	2510292	R	TOT_010001071	complement(join(<2509540..2509650,2509681..2509826,2509869..>2510292))	Theileria orientalis strain Shintoku	20713890
TOT_010001072	mRNA	TOT_010001072	NC_025260.1	2510474	2511983	R	TOT_010001072	complement(join(<2510474..2510599,2510630..2510749,2510783..2510866,2511000..>2511983))	Theileria orientalis strain Shintoku	20713891
TOT_010001073	mRNA	TOT_010001073	NC_025260.1	2513382	2515559	D	TOT_010001073	<2513382..>2515559	Theileria orientalis strain Shintoku	20713892
TOT_010001074	mRNA	TOT_010001074	NC_025260.1	2515608	2516557	D	TOT_010001074	join(<2515608..2515631,2515661..2515883,2515919..2515993,2516025..2516095,2516132..>2516557)	Theileria orientalis strain Shintoku	20713893
TOT_010001356	mRNA	TOT_010001356	NC_025260.1	2517248	2523952	D	TOT_010001356	join(<2517248..2518035,2518159..2518633,2518862..2519207,2519670..2520872,2521602..2521674,2521810..2522485,2522619..2522788,2522980..2523172,2523289..2523477,2523677..>2523952)	Theileria orientalis strain Shintoku	20714155
TOT_010001076	mRNA	TOT_010001076	NC_025260.1	2524302	2525445	R	TOT_010001076	complement(join(<2524302..2524399,2524537..2524671,2524726..2525047,2525152..>2525445))	Theileria orientalis strain Shintoku	20713894
TOT_010001077	mRNA	TOT_010001077	NC_025260.1	2525482	2528157	R	TOT_010001077	complement(join(<2525482..2526141,2526214..2527234,2527295..>2528157))	Theileria orientalis strain Shintoku	20713895
TOT_010001078	mRNA	TOT_010001078	NC_025260.1	2528671	2532669	D	TOT_010001078	join(<2528671..2530555,2530790..>2532669)	Theileria orientalis strain Shintoku	20713896
TOT_010001079	mRNA	TOT_010001079	NC_025260.1	2532983	2534194	R	TOT_010001079	complement(join(<2532983..2533262,2533353..2533455,2533488..2533899,2533997..>2534194))	Theileria orientalis strain Shintoku	20713897
TOT_010001080	mRNA	TOT_010001080	NC_025260.1	2534579	2535634	D	TOT_010001080	<2534579..>2535634	Theileria orientalis strain Shintoku	20713898
TOT_010001081	mRNA	TOT_010001081	NC_025260.1	2535967	2537510	R	TOT_010001081	complement(join(<2535967..2536391,2536491..2536635,2536695..2536846,2536960..2537034,2537111..2537281,2537330..>2537510))	Theileria orientalis strain Shintoku	20713899
TOT_010001082	mRNA	TOT_010001082	NC_025260.1	2538095	2538883	R	TOT_010001082	complement(join(<2538095..2538157,2538186..2538260,2538291..2538380,2538448..2538594,2538744..2538799,2538844..>2538883))	Theileria orientalis strain Shintoku	20713900
TOT_010001083	mRNA	TOT_010001083	NC_025260.1	2539115	2541025	R	TOT_010001083	complement(join(<2539115..2540001,2540086..>2541025))	Theileria orientalis strain Shintoku	20713901
TOT_010001084	mRNA	TOT_010001084	NC_025260.1	2542776	2543282	R	TOT_010001084	complement(<2542776..>2543282)	Theileria orientalis strain Shintoku	20713902
TOT_010001085	mRNA	TOT_010001085	NC_025260.1	2544554	2544847	D	TOT_010001085	<2544554..>2544847	Theileria orientalis strain Shintoku	20713903
TOT_010001086	mRNA	TOT_010001086	NC_025260.1	2544896	2546237	R	TOT_010001086	complement(join(<2544896..2545055,2545132..2545251,2545470..2545562,2545657..>2546237))	Theileria orientalis strain Shintoku	20713904
TOT_010001087	mRNA	TOT_010001087	NC_025260.1	2547111	2547436	D	TOT_010001087	join(<2547111..2547224,2547251..>2547436)	Theileria orientalis strain Shintoku	20713905
TOT_010001088	mRNA	TOT_010001088	NC_025260.1	2548017	2550783	D	TOT_010001088	join(<2548017..2548964,2549170..2549514,2550118..>2550783)	Theileria orientalis strain Shintoku	20713906
TOT_010001089	mRNA	TOT_010001089	NC_025260.1	2551258	2551950	D	TOT_010001089	<2551258..>2551950	Theileria orientalis strain Shintoku	20713907
TOT_010001357	mRNA	TOT_010001357	NC_025260.1	2552312	2553474	R	TOT_010001357	complement(join(<2552312..2552444,2552832..2552897,2552940..2552992,2553391..>2553474))	Theileria orientalis strain Shintoku	20714156
TOT_010001358	mRNA	TOT_010001358	NC_025260.1	2553611	2554023	R	TOT_010001358	complement(join(<2553611..2553703,2553737..2553786,2553818..2553894,2553938..>2554023))	Theileria orientalis strain Shintoku	20714157
TOT_010001359	mRNA	TOT_010001359	NC_025260.1	2554985	2557322	R	TOT_010001359	complement(join(<2554985..2555132,2555200..2555271,2555337..2555453,2555483..2555642,2555736..2556002,2556140..2556592,2556635..>2557322))	Theileria orientalis strain Shintoku	20714158
TOT_010001093	mRNA	TOT_010001093	NC_025260.1	2558146	2562754	D	TOT_010001093	join(<2558146..2558920,2559062..2559589,2559686..2559848,2560230..2560750,2560916..2561186,2561259..2561286,2561329..2561515,2561679..2561882,2562020..2562425,2562619..>2562754)	Theileria orientalis strain Shintoku	20713908
TOT_010001094	mRNA	TOT_010001094	NC_025260.1	2562877	2564938	R	TOT_010001094	complement(join(<2562877..2562930,2563066..2563580,2563688..2563863,2563957..2564045,2564115..2564224,2564291..2564381,2564456..2564568,2564673..2564749,2564784..>2564938))	Theileria orientalis strain Shintoku	20713909
TOT_010001095	mRNA	TOT_010001095	NC_025260.1	2565090	2568465	D	TOT_010001095	join(<2565090..2565332,2565400..2565627,2565708..2565831,2565943..2566674,2566830..2566906,2567031..2567069,2567098..2567256,2567331..2567405,2567711..2567807,2567930..2568014,2568195..>2568465)	Theileria orientalis strain Shintoku	20713910
TOT_010001096	mRNA	TOT_010001096	NC_025260.1	2569544	2570883	D	TOT_010001096	join(<2569544..2569621,2569655..2569766,2569798..2569988,2570057..2570319,2570451..>2570883)	Theileria orientalis strain Shintoku	20713911
TOT_010001360	mRNA	TOT_010001360	NC_025260.1	2571039	2571855	R	TOT_010001360	complement(join(<2571039..2571090,2571140..2571280,2571332..2571386,2571419..2571502,2571531..>2571855))	Theileria orientalis strain Shintoku	20714159
TOT_010001098	mRNA	TOT_010001098	NC_025260.1	2572073	2574256	R	TOT_010001098	complement(join(<2572073..2572198,2572285..2572361,2572393..2572537,2572570..2572640,2572670..2572778,2572809..2572880,2572957..2573128,2573160..2573261,2573292..2573377,2573407..2573483,2573515..2573588,2573619..>2574256))	Theileria orientalis strain Shintoku	20713912
TOT_010001099	mRNA	TOT_010001099	NC_025260.1	2574372	2575103	R	TOT_010001099	complement(join(<2574372..2574564,2574596..2574872,2574910..2574951,2574983..>2575103))	Theileria orientalis strain Shintoku	20713913
TOT_010001100	mRNA	TOT_010001100	NC_025260.1	2575613	2577638	D	TOT_010001100	join(<2575613..2575812,2575845..2576004,2576037..2576138,2576169..2576273,2576346..2576537,2576567..2576693,2576813..2577048,2577150..2577416,2577495..>2577638)	Theileria orientalis strain Shintoku	20713914
TOT_010001101	mRNA	TOT_010001101	NC_025260.1	2577848	2581021	D	TOT_010001101	join(<2577848..2577956,2577997..2578141,2578176..2578615,2578701..2578966,2579029..2579166,2579292..2579441,2579526..2579853,2580044..2580237,2580365..2580570,2580793..>2581021)	Theileria orientalis strain Shintoku	20713915
TOT_010001102	mRNA	TOT_010001102	NC_025260.1	2581311	2583105	R	TOT_010001102	complement(join(<2581311..2581733,2581794..2582121,2582179..2582773,2582808..2582968,2583005..>2583105))	Theileria orientalis strain Shintoku	20713916
TOT_010001103	mRNA	TOT_010001103	NC_025260.1	2583499	2585962	R	TOT_010001103	complement(join(<2583499..2583603,2583761..2584944,2584975..2585223,2585305..>2585962))	Theileria orientalis strain Shintoku	20713917
TOT_010001104	mRNA	TOT_010001104	NC_025260.1	2586909	2592817	D	TOT_010001104	join(<2586909..2587029,2587065..>2592817)	Theileria orientalis strain Shintoku	20713918
TOT_010001105	mRNA	TOT_010001105	NC_025260.1	2592977	2594235	R	TOT_010001105	complement(join(<2592977..2593437,2593467..2593651,2593683..2593798,2593828..2594169,2594203..>2594235))	Theileria orientalis strain Shintoku	20713919
TOT_010001106	mRNA	TOT_010001106	NC_025260.1	2594563	2596180	R	TOT_010001106	complement(join(<2594563..2594645,2594678..2594903,2594937..2595139,2595172..2595367,2595400..2595804,2595836..>2596180))	Theileria orientalis strain Shintoku	20713920
TOT_010001107	mRNA	TOT_010001107	NC_025260.1	2597390	2599380	R	TOT_010001107	complement(join(<2597390..2597761,2597793..2597995,2598070..2598265,2598309..2598719,2598882..2599271,2599318..>2599380))	Theileria orientalis strain Shintoku	20713921
TOT_010001108	mRNA	TOT_010001108	NC_025260.1	2599466	2600926	R	TOT_010001108	complement(join(<2599466..2599580,2599671..>2600926))	Theileria orientalis strain Shintoku	20713922
TOT_010001109	mRNA	TOT_010001109	NC_025260.1	2601441	2603804	D	TOT_010001109	join(<2601441..2601893,2601923..2602159,2602189..2602320,2602353..2602430,2602461..2603098,2603269..2603572,2603607..>2603804)	Theileria orientalis strain Shintoku	20713923
TOT_010001110	mRNA	TOT_010001110	NC_025260.1	2603995	2605521	R	TOT_010001110	complement(join(<2603995..2604315,2604363..2604479,2604554..2604967,2604997..>2605521))	Theileria orientalis strain Shintoku	20713924
TOT_010001111	mRNA	TOT_010001111	NC_025260.1	2606533	2611103	D	TOT_010001111	join(<2606533..2608023,2608111..2609525,2609743..2609864,2609904..2610066,2610288..2610528,2610777..>2611103)	Theileria orientalis strain Shintoku	20713925
TOT_010001112	mRNA	TOT_010001112	NC_025260.1	2611221	2611959	R	TOT_010001112	complement(join(<2611221..2611423,2611620..2611715,2611747..2611812,2611842..>2611959))	Theileria orientalis strain Shintoku	20713926
TOT_010001113	mRNA	TOT_010001113	NC_025260.1	2612290	2612541	D	TOT_010001113	<2612290..>2612541	Theileria orientalis strain Shintoku	20713927
TOT_010001114	mRNA	TOT_010001114	NC_025260.1	2612882	2615283	R	TOT_010001114	complement(join(<2612882..2613031,2613085..2613237,2613269..2615241,2615253..>2615283))	Theileria orientalis strain Shintoku	20713928
TOT_010001361	mRNA	TOT_010001361	NC_025260.1	2616214	2617086	D	TOT_010001361	<2616214..>2617086	Theileria orientalis strain Shintoku	20714160
TOT_010001116	mRNA	TOT_010001116	NC_025260.1	2617328	2621962	R	TOT_010001116	complement(join(<2617328..2620225,2620258..2620353,2620760..2621307,2621340..2621377,2621416..2621499,2621534..2621615,2621646..2621712,2621743..2621867,2621914..>2621962))	Theileria orientalis strain Shintoku	20713929
TOT_010001117	mRNA	TOT_010001117	NC_025260.1	2622169	2623221	R	TOT_010001117	complement(join(<2622169..2622885,2622918..2623045,2623095..>2623221))	Theileria orientalis strain Shintoku	20713930
TOT_010001118	mRNA	TOT_010001118	NC_025260.1	2623483	2624108	R	TOT_010001118	complement(join(<2623483..2623919,2623952..>2624108))	Theileria orientalis strain Shintoku	20713931
TOT_010001362	mRNA	TOT_010001362	NC_025260.1	2624640	2625521	D	TOT_010001362	join(<2624640..2624799,2624829..2625304,2625336..>2625521)	Theileria orientalis strain Shintoku	20714161
TOT_010001120	mRNA	TOT_010001120	NC_025260.1	2625989	2627640	R	TOT_010001120	complement(join(<2625989..2626128,2626158..>2627640))	Theileria orientalis strain Shintoku	20713932
TOT_010001121	mRNA	TOT_010001121	NC_025260.1	2627842	2628425	R	TOT_010001121	complement(join(<2627842..2628113,2628143..>2628425))	Theileria orientalis strain Shintoku	20713933
TOT_010001122	mRNA	TOT_010001122	NC_025260.1	2628962	2629384	D	TOT_010001122	<2628962..>2629384	Theileria orientalis strain Shintoku	20713934
TOT_010001123	mRNA	TOT_010001123	NC_025260.1	2630022	2646590	D	TOT_010001123	join(<2630022..2633806,2633846..2634529,2634596..2641021,2641181..2645041,2645297..2646173,2646411..>2646590)	Theileria orientalis strain Shintoku	20713935
TOT_010001124	mRNA	TOT_010001124	NC_025260.1	2646726	2647509	R	TOT_010001124	complement(join(<2646726..2646893,2646964..>2647509))	Theileria orientalis strain Shintoku	20713936
TOT_010001125	mRNA	TOT_010001125	NC_025260.1	2647679	2649787	R	TOT_010001125	complement(join(<2647679..2648420,2648523..2649178,2649208..2649549,2649713..>2649787))	Theileria orientalis strain Shintoku	20713937
TOT_010001126	mRNA	TOT_010001126	NC_025260.1	2650220	2651613	D	TOT_010001126	join(<2650220..2650363,2650395..2650544,2650574..2650732,2650763..2650879,2650909..2651066,2651097..2651167,2651198..>2651613)	Theileria orientalis strain Shintoku	20713938
TOT_010001127	mRNA	TOT_010001127	NC_025260.1	2651979	2654355	D	TOT_010001127	join(<2651979..2654150,2654185..>2654355)	Theileria orientalis strain Shintoku	20713939
TOT_010001128	mRNA	TOT_010001128	NC_025260.1	2655063	2657399	D	TOT_010001128	join(<2655063..2655593,2655669..>2657399)	Theileria orientalis strain Shintoku	20713940
TOT_010001129	mRNA	TOT_010001129	NC_025260.1	2657460	2659844	D	TOT_010001129	join(<2657460..2657597,2657632..2657747,2657782..2657884,2657918..2658005,2658037..2658971,2659003..2659169,2659289..>2659844)	Theileria orientalis strain Shintoku	20713941
TOT_010001130	mRNA	TOT_010001130	NC_025260.1	2660057	2661276	R	TOT_010001130	complement(join(<2660057..2660132,2660152..2661104,2661142..>2661276))	Theileria orientalis strain Shintoku	20713942
TOT_010001131	mRNA	TOT_010001131	NC_025260.1	2662000	2663246	D	TOT_010001131	join(<2662000..2662177,2662212..2662333,2662364..2662452,2662484..2662581,2662614..2662656,2662699..2662836,2662869..2663083,2663125..>2663246)	Theileria orientalis strain Shintoku	20713943
TOT_010001363	mRNA	TOT_010001363	NC_025260.1	2663521	2664852	D	TOT_010001363	join(<2663521..2663790,2663825..2663924,2663953..2664008,2664039..2664087,2664120..2664190,2664221..2664295,2664326..2664382,2664414..2664485,2664517..2664743,2664774..>2664852)	Theileria orientalis strain Shintoku	20714162
TOT_010001133	mRNA	TOT_010001133	NC_025260.1	2664906	2665823	R	TOT_010001133	complement(join(<2664906..2665085,2665174..2665248,2665287..2665379,2665409..2665567,2665608..2665681,2665715..>2665823))	Theileria orientalis strain Shintoku	20713944
TOT_010001134	mRNA	TOT_010001134	NC_025260.1	2665884	2667036	R	TOT_010001134	complement(join(<2665884..2666087,2666126..2666189,2666255..2666395,2666426..2666499,2666533..2666587,2666620..2666828,2666860..>2667036))	Theileria orientalis strain Shintoku	20713945
TOT_010001135	mRNA	TOT_010001135	NC_025260.1	2667344	2668090	D	TOT_010001135	join(<2667344..2667495,2667536..2667662,2667704..2667874,2667905..>2668090)	Theileria orientalis strain Shintoku	20713946
TOT_010001136	mRNA	TOT_010001136	NC_025260.1	2668220	2669498	R	TOT_010001136	complement(join(<2668220..2668422,2668582..2668924,2668955..2669126,2669161..2669297,2669334..2669366,2669403..>2669498))	Theileria orientalis strain Shintoku	20713947
TOT_010001137	mRNA	TOT_010001137	NC_025260.1	2670055	2673438	D	TOT_010001137	join(<2670055..2672859,2673004..>2673438)	Theileria orientalis strain Shintoku	20713948
TOT_010001138	mRNA	TOT_010001138	NC_025260.1	2673563	2674387	D	TOT_010001138	<2673563..>2674387	Theileria orientalis strain Shintoku	20713949
TOT_010001139	mRNA	TOT_010001139	NC_025260.1	2674690	2675649	D	TOT_010001139	<2674690..>2675649	Theileria orientalis strain Shintoku	20713950
TOT_010001140	mRNA	TOT_010001140	NC_025260.1	2676115	2677085	D	TOT_010001140	join(<2676115..2676850,2676880..>2677085)	Theileria orientalis strain Shintoku	20713951
TOT_010001141	mRNA	TOT_010001141	NC_025260.1	2677245	2680699	R	TOT_010001141	complement(join(<2677245..2677651,2677835..2678127,2678284..2678992,2679057..2679496,2679701..2679870,2679917..2680062,2680136..2680372,2680456..>2680699))	Theileria orientalis strain Shintoku	20713952
TOT_010001142	mRNA	TOT_010001142	NC_025260.1	2681587	2682535	D	TOT_010001142	join(<2681587..2681658,2681697..2681858,2681918..>2682535)	Theileria orientalis strain Shintoku	20713953
TOT_010001364	mRNA	TOT_010001364	NC_025260.1	2682768	2684393	R	TOT_010001364	complement(<2682768..>2684393)	Theileria orientalis strain Shintoku	20714163
TOT_010001365	mRNA	TOT_010001365	NC_025260.1	2684723	2685155	R	TOT_010001365	complement(join(<2684723..2684929,2684973..>2685155))	Theileria orientalis strain Shintoku	20714164
TOT_010001145	mRNA	TOT_010001145	NC_025260.1	2685809	2686447	D	TOT_010001145	<2685809..>2686447	Theileria orientalis strain Shintoku	20713954
TOT_010001146	mRNA	TOT_010001146	NC_025260.1	2687037	2688013	D	TOT_010001146	join(<2687037..2687791,2687863..>2688013)	Theileria orientalis strain Shintoku	20713955
TOT_010001366	mRNA	TOT_010001366	NC_025260.1	2688273	2689649	R	TOT_010001366	complement(<2688273..>2689649)	Theileria orientalis strain Shintoku	20714165
TOT_010001367	mRNA	TOT_010001367	NC_025260.1	2690028	2690622	R	TOT_010001367	complement(join(<2690028..2690327,2690359..>2690622))	Theileria orientalis strain Shintoku	20714166
TOT_010001149	mRNA	TOT_010001149	NC_025260.1	2690776	2691656	R	TOT_010001149	complement(join(<2690776..2691114,2691150..2691253,2691284..2691529,2691575..>2691656))	Theileria orientalis strain Shintoku	20713956
TOT_010001368	mRNA	TOT_010001368	NC_025260.1	2692393	2693175	D	TOT_010001368	join(<2692393..2692591,2692624..2692797,2692829..2692925,2692957..2693023,2693053..>2693175)	Theileria orientalis strain Shintoku	20714167
TOT_010001151	mRNA	TOT_010001151	NC_025260.1	2693299	2694430	D	TOT_010001151	join(<2693299..2693487,2693559..2693663,2693705..2693792,2693887..2693984,2694015..2694106,2694133..2694192,2694223..>2694430)	Theileria orientalis strain Shintoku	20713957
TOT_010001152	mRNA	TOT_010001152	NC_025260.1	2694711	2696423	R	TOT_010001152	complement(<2694711..>2696423)	Theileria orientalis strain Shintoku	20713958
TOT_010001153	mRNA	TOT_010001153	NC_025260.1	2696732	2698759	D	TOT_010001153	join(<2696732..2697478,2697511..2697759,2697789..2697890,2697923..2698201,2698237..2698331,2698361..2698461,2698491..>2698759)	Theileria orientalis strain Shintoku	20713959
TOT_010001154	mRNA	TOT_010001154	NC_025260.1	2698997	2700427	D	TOT_010001154	join(<2698997..2699149,2699181..2699685,2699717..2699999,2700056..2700148,2700295..>2700427)	Theileria orientalis strain Shintoku	20713960
TOT_010001369	mRNA	TOT_010001369	NC_025260.1	2700263	2700754	R	TOT_010001369	complement(join(<2700263..2700370,2700408..2700485,2700523..2700556,2700621..>2700754))	Theileria orientalis strain Shintoku	20714168
TOT_010001156	mRNA	TOT_010001156	NC_025260.1	2701433	2702310	D	TOT_010001156	join(<2701433..2701504,2701537..2701641,2701675..2701818,2701850..2702043,2702072..2702168,2702200..>2702310)	Theileria orientalis strain Shintoku	20713961
TOT_010001370	mRNA	TOT_010001370	NC_025260.1	2702423	2702947	R	TOT_010001370	complement(<2702423..>2702947)	Theileria orientalis strain Shintoku	20714169
TOT_010001158	mRNA	TOT_010001158	NC_025260.1	2703800	2704306	R	TOT_010001158	complement(<2703800..>2704306)	Theileria orientalis strain Shintoku	20713962
TOT_010001371	mRNA	TOT_010001371	NC_025260.1	2704892	2705575	D	TOT_010001371	<2704892..>2705575	Theileria orientalis strain Shintoku	20714170
TOT_010001160	mRNA	TOT_010001160	NC_025260.1	2707931	2708479	D	TOT_010001160	<2707931..>2708479	Theileria orientalis strain Shintoku	20713963
TOT_010001161	mRNA	TOT_010001161	NC_025260.1	2709001	2712324	D	TOT_010001161	join(<2709001..2709460,2709695..>2712324)	Theileria orientalis strain Shintoku	20713964
TOT_010001162	mRNA	TOT_010001162	NC_025260.1	2713173	2713283	D	TOT_010001162	<2713173..>2713283	Theileria orientalis strain Shintoku	20713965
TOT_010001163	mRNA	TOT_010001163	NC_025260.1	2713658	2713928	R	TOT_010001163	complement(join(<2713658..2713687,2713806..>2713928))	Theileria orientalis strain Shintoku	20713966
TOT_010001164	mRNA	TOT_010001164	NC_025260.1	2713958	2719066	D	TOT_010001164	<2713958..>2719066	Theileria orientalis strain Shintoku	20713967
TOT_010001165	mRNA	TOT_010001165	NC_025260.1	2720053	2721825	D	TOT_010001165	<2720053..>2721825	Theileria orientalis strain Shintoku	20713968
TOT_010001166	mRNA	TOT_010001166	NC_025260.1	2722050	2722763	R	TOT_010001166	complement(<2722050..>2722763)	Theileria orientalis strain Shintoku	20713969
TOT_010001167	mRNA	TOT_010001167	NC_025260.1	2723372	2723902	R	TOT_010001167	complement(<2723372..>2723902)	Theileria orientalis strain Shintoku	20713970
TOT_010001168	mRNA	TOT_010001168	NC_025260.1	2724005	2724209	D	TOT_010001168	join(<2724005..2724007,2724030..>2724209)	Theileria orientalis strain Shintoku	20713971
TOT_010001169	mRNA	TOT_010001169	NC_025260.1	2724765	2726057	R	TOT_010001169	complement(<2724765..>2726057)	Theileria orientalis strain Shintoku	20713972
TOT_010001170	mRNA	TOT_010001170	NC_025260.1	2726304	2726776	D	TOT_010001170	join(<2726304..2726389,2726713..>2726776)	Theileria orientalis strain Shintoku	20713973
TOT_010001171	mRNA	TOT_010001171	NC_025260.1	2726992	2731830	R	TOT_010001171	complement(<2726992..>2731830)	Theileria orientalis strain Shintoku	20713974
TOT_010001172	mRNA	TOT_010001172	NC_025260.1	2732873	2733109	R	TOT_010001172	complement(<2732873..>2733109)	Theileria orientalis strain Shintoku	20713975
TOT_010001173	mRNA	TOT_010001173	NC_025260.1	2733229	2733411	D	TOT_010001173	join(<2733229..2733261,2733292..>2733411)	Theileria orientalis strain Shintoku	20713976
TOT_010001174	mRNA	TOT_010001174	NC_025260.1	2734226	2734955	D	TOT_010001174	join(<2734226..2734286,2734464..2734600,2734830..>2734955)	Theileria orientalis strain Shintoku	20713977
TOT_010001175	mRNA	TOT_010001175	NC_025260.1	2735050	2735255	R	TOT_010001175	complement(join(<2735050..2735132,2735198..>2735255))	Theileria orientalis strain Shintoku	20713978
TOT_010001176	mRNA	TOT_010001176	NC_025260.1	2735484	2740004	D	TOT_010001176	<2735484..>2740004	Theileria orientalis strain Shintoku	20713979
TOT_010001177	mRNA	TOT_010001177	NC_025260.1	2740763	2740965	D	TOT_010001177	join(<2740763..2740807,2740873..>2740965)	Theileria orientalis strain Shintoku	20713980
TOT_010001178	mRNA	TOT_010001178	NC_025260.1	2741368	2742816	R	TOT_010001178	complement(<2741368..>2742816)	Theileria orientalis strain Shintoku	20713981
TOT_010001179	mRNA	TOT_010001179	NC_025260.1	2743467	2743628	R	TOT_010001179	complement(<2743467..>2743628)	Theileria orientalis strain Shintoku	20713982
TOT_010001180	mRNA	TOT_010001180	NC_025260.1	2743913	2745002	R	TOT_010001180	complement(join(<2743913..2744012,2744462..2744795,2744951..>2745002))	Theileria orientalis strain Shintoku	20713983
TOT_010001372	mRNA	TOT_010001372	NC_025260.1	2745344	2745532	R	TOT_010001372	complement(<2745344..>2745532)	Theileria orientalis strain Shintoku	20714171
TOT_020000001	mRNA	TOT_020000001	NC_025261.1	949	7161	R	TOT_020000001	complement(join(<949..1563,5884..>7161))	Theileria orientalis strain Shintoku	20714190
TOT_020000002	mRNA	TOT_020000002	NC_025261.1	8510	8871	D	TOT_020000002	join(<8510..8628,8718..>8871)	Theileria orientalis strain Shintoku	20714191
TOT_020000003	mRNA	TOT_020000003	NC_025261.1	9481	10925	D	TOT_020000003	join(<9481..9557,10778..>10925)	Theileria orientalis strain Shintoku	20714192
TOT_020000004	mRNA	TOT_020000004	NC_025261.1	12065	19255	D	TOT_020000004	join(<12065..13330,13358..16052,16089..>19255)	Theileria orientalis strain Shintoku	20714193
TOT_020000005	mRNA	TOT_020000005	NC_025261.1	19263	19391	D	TOT_020000005	<19263..>19391	Theileria orientalis strain Shintoku	20714194
TOT_020000006	mRNA	TOT_020000006	NC_025261.1	19823	24406	R	TOT_020000006	complement(<19823..>24406)	Theileria orientalis strain Shintoku	20714195
TOT_020000007	mRNA	TOT_020000007	NC_025261.1	25597	27091	D	TOT_020000007	join(<25597..26861,27013..>27091)	Theileria orientalis strain Shintoku	20714196
TOT_020000008	mRNA	TOT_020000008	NC_025261.1	27623	29041	D	TOT_020000008	join(<27623..27920,28014..>29041)	Theileria orientalis strain Shintoku	20714197
TOT_020000009	mRNA	TOT_020000009	NC_025261.1	29095	30659	R	TOT_020000009	complement(join(<29095..29142,29385..>30659))	Theileria orientalis strain Shintoku	20714198
TOT_020000010	mRNA	TOT_020000010	NC_025261.1	31156	34731	R	TOT_020000010	complement(join(<31156..33223,33254..33454,33479..33546,33697..>34731))	Theileria orientalis strain Shintoku	20714199
TOT_020000011	mRNA	TOT_020000011	NC_025261.1	35034	35162	R	TOT_020000011	complement(<35034..>35162)	Theileria orientalis strain Shintoku	20714200
TOT_020000012	mRNA	TOT_020000012	NC_025261.1	35947	36456	D	TOT_020000012	<35947..>36456	Theileria orientalis strain Shintoku	20714201
TOT_020000013	mRNA	TOT_020000013	NC_025261.1	37129	42258	D	TOT_020000013	<37129..>42258	Theileria orientalis strain Shintoku	20714202
TOT_020000014	mRNA	TOT_020000014	NC_025261.1	42495	43979	R	TOT_020000014	complement(join(<42495..43007,43362..>43979))	Theileria orientalis strain Shintoku	20714203
TOT_020000015	mRNA	TOT_020000015	NC_025261.1	44303	46984	R	TOT_020000015	complement(<44303..>46984)	Theileria orientalis strain Shintoku	20714204
TOT_020001016	mRNA	TOT_020001016	NC_025261.1	47312	48444	R	TOT_020001016	complement(join(<47312..47518,47550..48162,48258..48321,48357..>48444))	Theileria orientalis strain Shintoku	20715107
TOT_020000017	mRNA	TOT_020000017	NC_025261.1	48695	49804	D	TOT_020000017	join(<48695..48758,48802..48921,48951..49318,49351..49506,49536..49668,49701..>49804)	Theileria orientalis strain Shintoku	20714205
TOT_020000018	mRNA	TOT_020000018	NC_025261.1	50160	54240	D	TOT_020000018	join(<50160..50749,50873..52063,52095..52188,52219..52316,52346..52868,52947..53299,53332..53428,53459..53817,53850..53973,54004..>54240)	Theileria orientalis strain Shintoku	20714206
TOT_020000019	mRNA	TOT_020000019	NC_025261.1	54311	57775	D	TOT_020000019	join(<54311..54936,54979..56002,56035..57429,57527..>57775)	Theileria orientalis strain Shintoku	20714207
TOT_020000020	mRNA	TOT_020000020	NC_025261.1	57972	59187	R	TOT_020000020	complement(join(<57972..58081,58112..58873,58905..>59187))	Theileria orientalis strain Shintoku	20714208
TOT_020000021	mRNA	TOT_020000021	NC_025261.1	59322	60780	D	TOT_020000021	join(<59322..59491,59539..59788,59888..60058,60089..60134,60167..60486,60528..60697,60729..>60780)	Theileria orientalis strain Shintoku	20714209
TOT_020000022	mRNA	TOT_020000022	NC_025261.1	60952	65253	D	TOT_020000022	join(<60952..61578,61627..>65253)	Theileria orientalis strain Shintoku	20714210
TOT_020000994	mRNA	TOT_020000994	NC_025261.1	65506	68157	R	TOT_020000994	complement(join(<65506..65614,65644..65766,65869..66002,66065..66248,66282..66404,66504..67383,67416..67722,67780..>68157))	Theileria orientalis strain Shintoku	20715092
TOT_020000024	mRNA	TOT_020000024	NC_025261.1	68642	69843	D	TOT_020000024	join(<68642..69728,69761..>69843)	Theileria orientalis strain Shintoku	20714211
TOT_020000995	mRNA	TOT_020000995	NC_025261.1	69965	70387	D	TOT_020000995	<69965..>70387	Theileria orientalis strain Shintoku	20715093
TOT_020001017	mRNA	TOT_020001017	NC_025261.1	70633	71153	D	TOT_020001017	join(<70633..70679,70719..70811,70842..70942,70980..71047,71082..>71153)	Theileria orientalis strain Shintoku	20715108
TOT_020000025	mRNA	TOT_020000025	NC_025261.1	71270	72607	R	TOT_020000025	complement(<71270..>72607)	Theileria orientalis strain Shintoku	20714212
TOT_020000026	mRNA	TOT_020000026	NC_025261.1	72933	74450	D	TOT_020000026	join(<72933..73002,73066..>74450)	Theileria orientalis strain Shintoku	20714213
TOT_020000027	mRNA	TOT_020000027	NC_025261.1	74705	75934	D	TOT_020000027	join(<74705..74747,74850..75664,75749..>75934)	Theileria orientalis strain Shintoku	20714214
TOT_020000028	mRNA	TOT_020000028	NC_025261.1	75987	77024	D	TOT_020000028	join(<75987..76212,76261..>77024)	Theileria orientalis strain Shintoku	20714215
TOT_020000029	mRNA	TOT_020000029	NC_025261.1	78812	80510	R	TOT_020000029	complement(join(<78812..79684,80051..80252,80419..>80510))	Theileria orientalis strain Shintoku	20714216
TOT_020000030	mRNA	TOT_020000030	NC_025261.1	80829	81726	D	TOT_020000030	join(<80829..81121,81181..81464,81626..>81726)	Theileria orientalis strain Shintoku	20714217
TOT_020000031	mRNA	TOT_020000031	NC_025261.1	81996	83453	D	TOT_020000031	join(<81996..82141,82192..82435,82580..82996,83028..>83453)	Theileria orientalis strain Shintoku	20714218
TOT_020000032	mRNA	TOT_020000032	NC_025261.1	83555	84405	D	TOT_020000032	join(<83555..84014,84074..>84405)	Theileria orientalis strain Shintoku	20714219
TOT_020000033	mRNA	TOT_020000033	NC_025261.1	84568	85282	R	TOT_020000033	complement(join(<84568..84758,84788..84905,84965..>85282))	Theileria orientalis strain Shintoku	20714220
TOT_020000034	mRNA	TOT_020000034	NC_025261.1	85856	86436	D	TOT_020000034	join(<85856..85926,86000..86175,86230..86310,86402..>86436)	Theileria orientalis strain Shintoku	20714221
TOT_020000035	mRNA	TOT_020000035	NC_025261.1	86861	92204	D	TOT_020000035	join(<86861..87023,87056..87088,87204..87497,87539..87733,87980..88107,88348..89878,89959..>92204)	Theileria orientalis strain Shintoku	20714222
TOT_020000036	mRNA	TOT_020000036	NC_025261.1	92425	97749	R	TOT_020000036	complement(join(<92425..92941,93032..93859,94031..94678,94748..95011,95051..95775,95866..97094,97242..>97749))	Theileria orientalis strain Shintoku	20714223
TOT_020000037	mRNA	TOT_020000037	NC_025261.1	98314	99486	D	TOT_020000037	join(<98314..98422,98454..98553,98595..>99486)	Theileria orientalis strain Shintoku	20714224
TOT_020000038	mRNA	TOT_020000038	NC_025261.1	99760	100878	R	TOT_020000038	complement(<99760..>100878)	Theileria orientalis strain Shintoku	20714225
TOT_020000039	mRNA	TOT_020000039	NC_025261.1	101371	104037	D	TOT_020000039	join(<101371..103279,103344..103856,103886..>104037)	Theileria orientalis strain Shintoku	20714226
TOT_020001018	mRNA	TOT_020001018	NC_025261.1	104193	105969	R	TOT_020001018	complement(join(<104193..104291,104321..104663,104745..104815,104850..104924,104957..105043,105074..105247,105280..105429,105498..105569,105601..105648,105679..>105969))	Theileria orientalis strain Shintoku	20715109
TOT_020000041	mRNA	TOT_020000041	NC_025261.1	106331	108326	D	TOT_020000041	join(<106331..107590,107623..107824,107856..107939,107978..108048,108117..>108326)	Theileria orientalis strain Shintoku	20714227
TOT_020000042	mRNA	TOT_020000042	NC_025261.1	108532	109587	R	TOT_020000042	complement(join(<108532..109286,109371..>109587))	Theileria orientalis strain Shintoku	20714228
TOT_020000043	mRNA	TOT_020000043	NC_025261.1	110122	112313	D	TOT_020000043	join(<110122..112116,112203..>112313)	Theileria orientalis strain Shintoku	20714229
TOT_020000044	mRNA	TOT_020000044	NC_025261.1	112359	113819	D	TOT_020000044	join(<112359..112392,112440..112653,112688..>113819)	Theileria orientalis strain Shintoku	20714230
TOT_020000045	mRNA	TOT_020000045	NC_025261.1	114029	114421	R	TOT_020000045	complement(<114029..>114421)	Theileria orientalis strain Shintoku	20714231
TOT_020000046	mRNA	TOT_020000046	NC_025261.1	114760	115646	R	TOT_020000046	complement(join(<114760..114801,115281..>115646))	Theileria orientalis strain Shintoku	20714232
TOT_020001019	mRNA	TOT_020001019	NC_025261.1	116314	117128	D	TOT_020001019	join(<116314..116883,116949..>117128)	Theileria orientalis strain Shintoku	20715110
TOT_020000048	mRNA	TOT_020000048	NC_025261.1	117169	117845	R	TOT_020000048	complement(join(<117169..117381,117411..117479,117532..117761,117794..>117845))	Theileria orientalis strain Shintoku	20714233
TOT_020000049	mRNA	TOT_020000049	NC_025261.1	118237	119058	D	TOT_020000049	<118237..>119058	Theileria orientalis strain Shintoku	20714234
TOT_020000050	mRNA	TOT_020000050	NC_025261.1	119220	122803	R	TOT_020000050	complement(join(<119220..119513,119837..>122803))	Theileria orientalis strain Shintoku	20714235
TOT_020001020	mRNA	TOT_020001020	NC_025261.1	124421	125424	D	TOT_020001020	join(<124421..124822,124895..125260,125296..>125424)	Theileria orientalis strain Shintoku	20715111
TOT_020001021	mRNA	TOT_020001021	NC_025261.1	125645	126997	D	TOT_020001021	join(<125645..126661,126692..>126997)	Theileria orientalis strain Shintoku	20715112
TOT_020001022	mRNA	TOT_020001022	NC_025261.1	127665	128955	D	TOT_020001022	join(<127665..127843,127874..128858,128893..>128955)	Theileria orientalis strain Shintoku	20715113
TOT_020000054	mRNA	TOT_020000054	NC_025261.1	129044	130566	R	TOT_020000054	complement(join(<129044..129730,129771..129863,129896..130084,130120..130255,130298..>130566))	Theileria orientalis strain Shintoku	20714236
TOT_020000055	mRNA	TOT_020000055	NC_025261.1	130805	133915	D	TOT_020000055	join(<130805..131018,131051..131853,131885..132044,132074..133296,133328..133497,133585..>133915)	Theileria orientalis strain Shintoku	20714237
TOT_020000056	mRNA	TOT_020000056	NC_025261.1	133997	135097	R	TOT_020000056	complement(join(<133997..134218,134245..134424,134459..134519,134550..134611,134645..134754,134784..134915,134959..>135097))	Theileria orientalis strain Shintoku	20714238
TOT_020000057	mRNA	TOT_020000057	NC_025261.1	135378	136856	D	TOT_020000057	join(<135378..136310,136356..>136856)	Theileria orientalis strain Shintoku	20714239
TOT_020000058	mRNA	TOT_020000058	NC_025261.1	136914	137073	R	TOT_020000058	complement(join(<136914..137013,137021..>137073))	Theileria orientalis strain Shintoku	20714240
TOT_020000059	mRNA	TOT_020000059	NC_025261.1	137320	137837	D	TOT_020000059	join(<137320..137570,137611..137724,137756..>137837)	Theileria orientalis strain Shintoku	20714241
TOT_020000060	mRNA	TOT_020000060	NC_025261.1	138035	140541	R	TOT_020000060	complement(join(<138035..138918,139218..139892,139989..>140541))	Theileria orientalis strain Shintoku	20714242
TOT_020000061	mRNA	TOT_020000061	NC_025261.1	140854	141752	R	TOT_020000061	complement(join(<140854..141062,141097..141142,141182..141516,141584..>141752))	Theileria orientalis strain Shintoku	20714243
TOT_020000062	mRNA	TOT_020000062	NC_025261.1	142546	142902	D	TOT_020000062	join(<142546..142581,142679..142744,142828..>142902)	Theileria orientalis strain Shintoku	20714244
TOT_020000063	mRNA	TOT_020000063	NC_025261.1	142976	143190	D	TOT_020000063	join(<142976..143033,143063..>143190)	Theileria orientalis strain Shintoku	20714245
TOT_020000064	mRNA	TOT_020000064	NC_025261.1	143402	144720	D	TOT_020000064	join(<143402..143530,143720..143980,144019..144172,144458..>144720)	Theileria orientalis strain Shintoku	20714246
TOT_020000065	mRNA	TOT_020000065	NC_025261.1	145054	145161	D	TOT_020000065	<145054..>145161	Theileria orientalis strain Shintoku	20714247
TOT_020000066	mRNA	TOT_020000066	NC_025261.1	145363	146502	R	TOT_020000066	complement(join(<145363..146204,146430..>146502))	Theileria orientalis strain Shintoku	20714248
TOT_020000067	mRNA	TOT_020000067	NC_025261.1	147727	148533	D	TOT_020000067	<147727..>148533	Theileria orientalis strain Shintoku	20714249
TOT_020000068	mRNA	TOT_020000068	NC_025261.1	150660	150800	D	TOT_020000068	<150660..>150800	Theileria orientalis strain Shintoku	20714250
TOT_020000069	mRNA	TOT_020000069	NC_025261.1	150994	151964	R	TOT_020000069	complement(join(<150994..151201,151228..151378,151532..151625,151656..>151964))	Theileria orientalis strain Shintoku	20714251
TOT_020000070	mRNA	TOT_020000070	NC_025261.1	152292	154236	D	TOT_020000070	join(<152292..152530,152577..152771,152807..153310,153345..>154236)	Theileria orientalis strain Shintoku	20714252
TOT_020000071	mRNA	TOT_020000071	NC_025261.1	155024	156763	D	TOT_020000071	<155024..>156763	Theileria orientalis strain Shintoku	20714253
TOT_020000072	mRNA	TOT_020000072	NC_025261.1	156801	158448	D	TOT_020000072	join(<156801..156852,156937..157185,157239..157567,157597..157674,157713..157844,157920..158229,158402..>158448)	Theileria orientalis strain Shintoku	20714254
TOT_020000073	mRNA	TOT_020000073	NC_025261.1	158670	159152	R	TOT_020000073	complement(<158670..>159152)	Theileria orientalis strain Shintoku	20714255
TOT_020000074	mRNA	TOT_020000074	NC_025261.1	159678	160172	R	TOT_020000074	complement(<159678..>160172)	Theileria orientalis strain Shintoku	20714256
TOT_020000075	mRNA	TOT_020000075	NC_025261.1	160756	161680	D	TOT_020000075	join(<160756..161040,161072..161185,161234..>161680)	Theileria orientalis strain Shintoku	20714257
TOT_020000076	mRNA	TOT_020000076	NC_025261.1	161776	163717	R	TOT_020000076	complement(join(<161776..161797,161889..>163717))	Theileria orientalis strain Shintoku	20714258
TOT_020000077	mRNA	TOT_020000077	NC_025261.1	164728	165753	R	TOT_020000077	complement(<164728..>165753)	Theileria orientalis strain Shintoku	20714259
TOT_020000078	mRNA	TOT_020000078	NC_025261.1	166051	166914	R	TOT_020000078	complement(join(<166051..166296,166446..166646,166693..>166914))	Theileria orientalis strain Shintoku	20714260
TOT_020000079	mRNA	TOT_020000079	NC_025261.1	167479	168279	R	TOT_020000079	complement(join(<167479..167601,167636..167712,167754..167821,167861..167967,168001..>168279))	Theileria orientalis strain Shintoku	20714261
TOT_020000080	mRNA	TOT_020000080	NC_025261.1	168638	171335	R	TOT_020000080	complement(join(<168638..168730,168752..168898,168932..169048,169071..169143,169176..169262,169294..169369,169402..169522,169552..169664,169857..169998,170028..170273,170304..170372,170403..170475,170506..170703,170735..170766,170798..170894,170929..171066,171178..>171335))	Theileria orientalis strain Shintoku	20714262
TOT_020000081	mRNA	TOT_020000081	NC_025261.1	171434	172965	R	TOT_020000081	complement(join(<171434..172195,172227..172274,172307..172440,172470..172558,172592..>172965))	Theileria orientalis strain Shintoku	20714263
TOT_020000082	mRNA	TOT_020000082	NC_025261.1	173793	175298	R	TOT_020000082	complement(join(<173793..174610,174647..>175298))	Theileria orientalis strain Shintoku	20714264
TOT_020000083	mRNA	TOT_020000083	NC_025261.1	175727	177813	R	TOT_020000083	complement(join(<175727..176517,176595..>177813))	Theileria orientalis strain Shintoku	20714265
TOT_020000084	mRNA	TOT_020000084	NC_025261.1	178392	179806	R	TOT_020000084	complement(join(<178392..179182,179260..>179806))	Theileria orientalis strain Shintoku	20714266
TOT_020000085	mRNA	TOT_020000085	NC_025261.1	180300	181946	R	TOT_020000085	complement(join(<180300..180346,180381..181160,181253..>181946))	Theileria orientalis strain Shintoku	20714267
TOT_020000086	mRNA	TOT_020000086	NC_025261.1	182490	182648	R	TOT_020000086	complement(<182490..>182648)	Theileria orientalis strain Shintoku	20714268
TOT_020000087	mRNA	TOT_020000087	NC_025261.1	183543	183815	R	TOT_020000087	complement(join(<183543..183594,183655..>183815))	Theileria orientalis strain Shintoku	20714269
TOT_020000088	mRNA	TOT_020000088	NC_025261.1	183853	184947	R	TOT_020000088	complement(<183853..>184947)	Theileria orientalis strain Shintoku	20714270
TOT_020000089	mRNA	TOT_020000089	NC_025261.1	185144	186248	D	TOT_020000089	join(<185144..185278,185316..185418,185462..185649,185925..>186248)	Theileria orientalis strain Shintoku	20714271
TOT_020000090	mRNA	TOT_020000090	NC_025261.1	186358	187807	R	TOT_020000090	complement(join(<186358..186424,186481..186789,186824..186977,187014..187273,187398..187554,187594..187620,187663..>187807))	Theileria orientalis strain Shintoku	20714272
TOT_020000091	mRNA	TOT_020000091	NC_025261.1	187908	188837	D	TOT_020000091	<187908..>188837	Theileria orientalis strain Shintoku	20714273
TOT_020000092	mRNA	TOT_020000092	NC_025261.1	188872	189265	R	TOT_020000092	complement(join(<188872..188946,188976..189071,189115..189200,189241..>189265))	Theileria orientalis strain Shintoku	20714274
TOT_020000093	mRNA	TOT_020000093	NC_025261.1	189404	191849	D	TOT_020000093	join(<189404..189518,189551..189635,189667..190564,190713..191285,191436..>191849)	Theileria orientalis strain Shintoku	20714275
TOT_020000094	mRNA	TOT_020000094	NC_025261.1	192078	194227	R	TOT_020000094	complement(join(<192078..193676,193711..193926,193967..>194227))	Theileria orientalis strain Shintoku	20714276
TOT_020000095	mRNA	TOT_020000095	NC_025261.1	194398	197548	R	TOT_020000095	complement(join(<194398..196039,196071..197259,197305..>197548))	Theileria orientalis strain Shintoku	20714277
TOT_020000096	mRNA	TOT_020000096	NC_025261.1	197994	199260	R	TOT_020000096	complement(join(<197994..198751,198808..198855,198888..198942,198973..>199260))	Theileria orientalis strain Shintoku	20714278
TOT_020000097	mRNA	TOT_020000097	NC_025261.1	199471	201576	D	TOT_020000097	join(<199471..200265,200331..200608,200954..201110,201213..201291,201326..>201576)	Theileria orientalis strain Shintoku	20714279
TOT_020000098	mRNA	TOT_020000098	NC_025261.1	201732	204960	R	TOT_020000098	complement(join(<201732..203163,203224..203783,203841..204222,204298..204420,204530..>204960))	Theileria orientalis strain Shintoku	20714280
TOT_020000099	mRNA	TOT_020000099	NC_025261.1	205261	205946	R	TOT_020000099	complement(join(<205261..205364,205411..205587,205628..205787,205821..>205946))	Theileria orientalis strain Shintoku	20714281
TOT_020000100	mRNA	TOT_020000100	NC_025261.1	206428	208701	D	TOT_020000100	<206428..>208701	Theileria orientalis strain Shintoku	20714282
TOT_020000101	mRNA	TOT_020000101	NC_025261.1	208739	209181	R	TOT_020000101	complement(join(<208739..208923,208955..209039,209071..>209181))	Theileria orientalis strain Shintoku	20714283
TOT_020000102	mRNA	TOT_020000102	NC_025261.1	209607	213990	D	TOT_020000102	join(<209607..209980,210050..210806,210882..211809,211906..213008,213099..213383,213497..213620,213692..>213990)	Theileria orientalis strain Shintoku	20714284
TOT_020000103	mRNA	TOT_020000103	NC_025261.1	214091	214855	D	TOT_020000103	join(<214091..214309,214344..214405,214464..214534,214566..>214855)	Theileria orientalis strain Shintoku	20714285
TOT_020000104	mRNA	TOT_020000104	NC_025261.1	214932	215535	D	TOT_020000104	join(<214932..215093,215258..215437,215488..>215535)	Theileria orientalis strain Shintoku	20714286
TOT_020000105	mRNA	TOT_020000105	NC_025261.1	215976	220274	D	TOT_020000105	<215976..>220274	Theileria orientalis strain Shintoku	20714287
TOT_020000106	mRNA	TOT_020000106	NC_025261.1	220473	220925	D	TOT_020000106	join(<220473..220682,220836..>220925)	Theileria orientalis strain Shintoku	20714288
TOT_020000107	mRNA	TOT_020000107	NC_025261.1	220957	221377	R	TOT_020000107	complement(join(<220957..221002,221223..>221377))	Theileria orientalis strain Shintoku	20714289
TOT_020000108	mRNA	TOT_020000108	NC_025261.1	221532	222344	D	TOT_020000108	<221532..>222344	Theileria orientalis strain Shintoku	20714290
TOT_020000109	mRNA	TOT_020000109	NC_025261.1	222401	223281	R	TOT_020000109	complement(join(<222401..222428,222460..222612,222768..222907,222939..223032,223067..>223281))	Theileria orientalis strain Shintoku	20714291
TOT_020000110	mRNA	TOT_020000110	NC_025261.1	224641	226599	D	TOT_020000110	join(<224641..224890,224923..225894,226256..>226599)	Theileria orientalis strain Shintoku	20714292
TOT_020000111	mRNA	TOT_020000111	NC_025261.1	226680	228254	R	TOT_020000111	complement(join(<226680..226821,226937..227414,227644..227881,227913..>228254))	Theileria orientalis strain Shintoku	20714293
TOT_020000112	mRNA	TOT_020000112	NC_025261.1	229191	230742	D	TOT_020000112	join(<229191..229304,229343..229465,229496..229567,229597..229692,229724..229799,229857..229903,229934..230089,230119..230168,230203..230425,230560..230655,230689..>230742)	Theileria orientalis strain Shintoku	20714294
TOT_020000113	mRNA	TOT_020000113	NC_025261.1	230873	232150	R	TOT_020000113	complement(<230873..>232150)	Theileria orientalis strain Shintoku	20714295
TOT_020000114	mRNA	TOT_020000114	NC_025261.1	233522	234996	D	TOT_020000114	join(<233522..234102,234168..234252,234376..234645,234746..234823,234925..>234996)	Theileria orientalis strain Shintoku	20714296
TOT_020000115	mRNA	TOT_020000115	NC_025261.1	235062	237543	R	TOT_020000115	complement(join(<235062..235209,235241..235342,235468..235754,235810..235908,236044..236144,236171..236352,236385..236628,236711..236844,236876..237138,237169..>237543))	Theileria orientalis strain Shintoku	20714297
TOT_020000116	mRNA	TOT_020000116	NC_025261.1	238304	239317	D	TOT_020000116	join(<238304..238605,238641..238893,238925..239048,239157..>239317)	Theileria orientalis strain Shintoku	20714298
TOT_020001023	mRNA	TOT_020001023	NC_025261.1	239405	240975	R	TOT_020001023	complement(join(<239405..239501,239622..239729,239769..240020,240062..240141,240243..240319,240387..240534,240572..240741,240777..>240975))	Theileria orientalis strain Shintoku	20715114
TOT_020000118	mRNA	TOT_020000118	NC_025261.1	241368	241772	R	TOT_020000118	complement(<241368..>241772)	Theileria orientalis strain Shintoku	20714299
TOT_020000119	mRNA	TOT_020000119	NC_025261.1	242217	245473	R	TOT_020000119	complement(join(<242217..242324,242496..242651,242681..242818,242858..243157,243193..243323,243394..243936,243948..244048,244206..244351,244383..244598,244629..244824,244854..244915,244945..245304,245339..>245473))	Theileria orientalis strain Shintoku	20714300
TOT_020000120	mRNA	TOT_020000120	NC_025261.1	245798	248988	D	TOT_020000120	join(<245798..245839,245880..246004,246036..246120,246154..246312,246363..246503,246535..246617,246679..246788,246859..247014,247115..247218,247289..247371,247402..247470,247526..247661,247725..247824,247918..248459,248764..>248988)	Theileria orientalis strain Shintoku	20714301
TOT_020000121	mRNA	TOT_020000121	NC_025261.1	249140	251549	R	TOT_020000121	complement(join(<249140..249193,249255..249482,249579..250773,250824..250919,250976..251217,251250..>251549))	Theileria orientalis strain Shintoku	20714302
TOT_020000122	mRNA	TOT_020000122	NC_025261.1	251856	253955	D	TOT_020000122	<251856..>253955	Theileria orientalis strain Shintoku	20714303
TOT_020000123	mRNA	TOT_020000123	NC_025261.1	254087	255142	R	TOT_020000123	complement(<254087..>255142)	Theileria orientalis strain Shintoku	20714304
TOT_020000124	mRNA	TOT_020000124	NC_025261.1	255486	256342	D	TOT_020000124	join(<255486..255563,255599..255766,255806..255952,255987..256181,256214..>256342)	Theileria orientalis strain Shintoku	20714305
TOT_020000125	mRNA	TOT_020000125	NC_025261.1	257189	258892	R	TOT_020000125	complement(<257189..>258892)	Theileria orientalis strain Shintoku	20714306
TOT_020000126	mRNA	TOT_020000126	NC_025261.1	258995	260578	R	TOT_020000126	complement(join(<258995..260073,260130..260442,260486..>260578))	Theileria orientalis strain Shintoku	20714307
TOT_020000127	mRNA	TOT_020000127	NC_025261.1	260928	262348	R	TOT_020000127	complement(join(<260928..261001,261139..>262348))	Theileria orientalis strain Shintoku	20714308
TOT_020000128	mRNA	TOT_020000128	NC_025261.1	262441	262601	R	TOT_020000128	complement(join(<262441..262581,262590..>262601))	Theileria orientalis strain Shintoku	20714309
TOT_020000129	mRNA	TOT_020000129	NC_025261.1	263237	264142	R	TOT_020000129	complement(<263237..>264142)	Theileria orientalis strain Shintoku	20714310
TOT_020000131	mRNA	TOT_020000131	NC_025261.1	264768	265571	D	TOT_020000131	join(<264768..264873,264992..265125,265214..265286,265325..265482,265527..>265571)	Theileria orientalis strain Shintoku	20714311
TOT_020000132	mRNA	TOT_020000132	NC_025261.1	265812	268294	D	TOT_020000132	join(<265812..266009,266041..266519,266549..266699,266729..267196,267304..267456,267486..267625,267686..267812,267852..267988,268021..268197,268234..>268294)	Theileria orientalis strain Shintoku	20714312
TOT_020000133	mRNA	TOT_020000133	NC_025261.1	268399	271046	D	TOT_020000133	join(<268399..268659,268691..268822,268861..269077,269109..269352,269391..270240,270341..270447,270480..270630,270693..>271046)	Theileria orientalis strain Shintoku	20714313
TOT_020000134	mRNA	TOT_020000134	NC_025261.1	271094	271847	D	TOT_020000134	join(<271094..271306,271346..271486,271530..>271847)	Theileria orientalis strain Shintoku	20714314
TOT_020000135	mRNA	TOT_020000135	NC_025261.1	271975	275316	R	TOT_020000135	complement(join(<271975..272474,272598..272705,272863..274108,274262..275012,275312..>275316))	Theileria orientalis strain Shintoku	20714315
TOT_020000136	mRNA	TOT_020000136	NC_025261.1	275353	275865	D	TOT_020000136	<275353..>275865	Theileria orientalis strain Shintoku	20714316
TOT_020000137	mRNA	TOT_020000137	NC_025261.1	276599	278545	D	TOT_020000137	<276599..>278545	Theileria orientalis strain Shintoku	20714317
TOT_020000138	mRNA	TOT_020000138	NC_025261.1	278799	278981	R	TOT_020000138	complement(<278799..>278981)	Theileria orientalis strain Shintoku	20714318
TOT_020001024	mRNA	TOT_020001024	NC_025261.1	279030	281153	R	TOT_020001024	complement(join(<279030..279796,279941..>281153))	Theileria orientalis strain Shintoku	20715115
TOT_020001025	mRNA	TOT_020001025	NC_025261.1	281611	282895	R	TOT_020001025	complement(join(<281611..282394,282498..>282895))	Theileria orientalis strain Shintoku	20715116
TOT_020001026	mRNA	TOT_020001026	NC_025261.1	283195	284506	R	TOT_020001026	complement(join(<283195..284299,284334..>284506))	Theileria orientalis strain Shintoku	20715117
TOT_020000142	mRNA	TOT_020000142	NC_025261.1	284712	285997	R	TOT_020000142	complement(join(<284712..285676,285709..>285997))	Theileria orientalis strain Shintoku	20714319
TOT_020000143	mRNA	TOT_020000143	NC_025261.1	286240	286395	D	TOT_020000143	<286240..>286395	Theileria orientalis strain Shintoku	20714320
TOT_020000144	mRNA	TOT_020000144	NC_025261.1	286716	291150	D	TOT_020000144	join(<286716..286838,286913..287092,287130..287195,287225..287266,287298..287382,287417..287507,287539..287574,287606..287675,287706..287773,287835..287951,287983..288088,288119..288217,288298..288419,288450..288675,288708..288798,288928..289110,289156..289186,289227..289309,289324..289415,289442..289572,289684..289767,289823..289972,290036..290140,290217..290306,290339..290372,290403..290568,290637..290712,290922..>291150)	Theileria orientalis strain Shintoku	20714321
TOT_020000145	mRNA	TOT_020000145	NC_025261.1	291675	292052	D	TOT_020000145	join(<291675..291845,291876..>292052)	Theileria orientalis strain Shintoku	20714322
TOT_020001027	mRNA	TOT_020001027	NC_025261.1	292125	293138	R	TOT_020001027	complement(join(<292125..292815,292850..293025,293061..>293138))	Theileria orientalis strain Shintoku	20715118
TOT_020000147	mRNA	TOT_020000147	NC_025261.1	293373	294038	R	TOT_020000147	complement(join(<293373..293602,293711..293819,293854..293914,293956..>294038))	Theileria orientalis strain Shintoku	20714323
TOT_020000148	mRNA	TOT_020000148	NC_025261.1	294554	298929	D	TOT_020000148	join(<294554..296500,296548..296931,297035..297152,297332..297406,297438..297603,297750..>298929)	Theileria orientalis strain Shintoku	20714324
TOT_020000149	mRNA	TOT_020000149	NC_025261.1	298978	299439	R	TOT_020000149	complement(join(<298978..299034,299210..299274,299307..>299439))	Theileria orientalis strain Shintoku	20714325
TOT_020000150	mRNA	TOT_020000150	NC_025261.1	299799	300049	D	TOT_020000150	join(<299799..299924,299996..>300049)	Theileria orientalis strain Shintoku	20714326
TOT_020000151	mRNA	TOT_020000151	NC_025261.1	300880	303222	D	TOT_020000151	<300880..>303222	Theileria orientalis strain Shintoku	20714327
TOT_020000152	mRNA	TOT_020000152	NC_025261.1	303351	306108	D	TOT_020000152	join(<303351..305953,306090..>306108)	Theileria orientalis strain Shintoku	20714328
TOT_020000153	mRNA	TOT_020000153	NC_025261.1	306205	310623	D	TOT_020000153	join(<306205..307110,307192..307809,307957..308361,308428..>310623)	Theileria orientalis strain Shintoku	20714329
TOT_020000154	mRNA	TOT_020000154	NC_025261.1	310680	314315	R	TOT_020000154	complement(join(<310680..311003,311036..311127,311133..311226,311258..311366,311398..311540,311572..311996,312030..312238,312272..312471,312502..312701,313121..313968,314245..>314315))	Theileria orientalis strain Shintoku	20714330
TOT_020000155	mRNA	TOT_020000155	NC_025261.1	314347	315834	D	TOT_020000155	join(<314347..314953,314987..>315834)	Theileria orientalis strain Shintoku	20714331
TOT_020000156	mRNA	TOT_020000156	NC_025261.1	315921	320780	R	TOT_020000156	complement(join(<315921..317460,317587..317810,317870..320154,320185..320566,320598..>320780))	Theileria orientalis strain Shintoku	20714332
TOT_020000157	mRNA	TOT_020000157	NC_025261.1	321123	322773	R	TOT_020000157	complement(join(<321123..321172,321210..321276,321313..321393,321424..321570,321606..321650,321683..321724,321763..322022,322055..322152,322192..322366,322402..322645,322681..>322773))	Theileria orientalis strain Shintoku	20714333
TOT_020000158	mRNA	TOT_020000158	NC_025261.1	322834	325767	R	TOT_020000158	complement(join(<322834..323013,323076..323435,323564..323959,324091..324312,324344..324388,324425..324637,324743..324828,324869..325152,325184..325546,325583..325671,325705..>325767))	Theileria orientalis strain Shintoku	20714334
TOT_020000159	mRNA	TOT_020000159	NC_025261.1	325835	329475	R	TOT_020000159	complement(join(<325835..326156,326287..326512,326717..326887,327008..327751,328100..329260,329427..>329475))	Theileria orientalis strain Shintoku	20714335
TOT_020000160	mRNA	TOT_020000160	NC_025261.1	329950	333876	R	TOT_020000160	complement(join(<329950..330533,330762..>333876))	Theileria orientalis strain Shintoku	20714336
TOT_020000161	mRNA	TOT_020000161	NC_025261.1	335120	335397	D	TOT_020000161	join(<335120..335177,335342..>335397)	Theileria orientalis strain Shintoku	20714337
TOT_020000162	mRNA	TOT_020000162	NC_025261.1	335813	338445	D	TOT_020000162	join(<335813..337154,337246..337557,337658..>338445)	Theileria orientalis strain Shintoku	20714338
TOT_020000163	mRNA	TOT_020000163	NC_025261.1	338548	342558	D	TOT_020000163	join(<338548..341651,341841..>342558)	Theileria orientalis strain Shintoku	20714339
TOT_020001028	mRNA	TOT_020001028	NC_025261.1	342617	343170	D	TOT_020001028	join(<342617..342671,342815..342927,342997..>343170)	Theileria orientalis strain Shintoku	20715119
TOT_020000165	mRNA	TOT_020000165	NC_025261.1	343459	347624	D	TOT_020000165	join(<343459..343558,343634..343692,343724..343765,343799..343873,343932..344260,344379..344692,344732..344827,344869..345107,345320..345862,346014..346811,347000..347066,347162..347304,347574..>347624)	Theileria orientalis strain Shintoku	20714340
TOT_020000166	mRNA	TOT_020000166	NC_025261.1	347789	350058	R	TOT_020000166	complement(join(<347789..348739,348831..348854,348929..349531,349750..>350058))	Theileria orientalis strain Shintoku	20714341
TOT_020000167	mRNA	TOT_020000167	NC_025261.1	350424	353338	R	TOT_020000167	complement(join(<350424..350573,350609..350789,350819..350947,350979..351068,351099..351171,351204..351475,351506..351649,351801..>353338))	Theileria orientalis strain Shintoku	20714342
TOT_020000168	mRNA	TOT_020000168	NC_025261.1	353683	355367	D	TOT_020000168	join(<353683..353767,353818..353926,353960..354062,354123..354298,354335..354403,354441..354508,354546..354615,354671..354736,354780..354952,355237..>355367)	Theileria orientalis strain Shintoku	20714343
TOT_020000169	mRNA	TOT_020000169	NC_025261.1	355382	358763	R	TOT_020000169	complement(join(<355382..355469,355843..>358763))	Theileria orientalis strain Shintoku	20714344
TOT_020000170	mRNA	TOT_020000170	NC_025261.1	359272	362008	D	TOT_020000170	join(<359272..359455,359496..359735,359767..359976,360008..360069,360102..360165,360196..360253,360337..360772,360947..361332,361366..361508,361546..361629,361661..361742,361785..361861,361902..>362008)	Theileria orientalis strain Shintoku	20714345
TOT_020001029	mRNA	TOT_020001029	NC_025261.1	362465	365350	D	TOT_020001029	join(<362465..364041,364291..364750,364856..>365350)	Theileria orientalis strain Shintoku	20715120
TOT_020000172	mRNA	TOT_020000172	NC_025261.1	365681	366624	R	TOT_020000172	complement(join(<365681..365743,365779..365972,366001..366047,366078..366163,366195..366290,366337..>366624))	Theileria orientalis strain Shintoku	20714346
TOT_020000173	mRNA	TOT_020000173	NC_025261.1	366744	367877	R	TOT_020000173	complement(join(<366744..367362,367438..>367877))	Theileria orientalis strain Shintoku	20714347
TOT_020001030	mRNA	TOT_020001030	NC_025261.1	368401	369736	D	TOT_020001030	join(<368401..368556,368588..369099,369131..369220,369347..369524,369559..369639,369671..>369736)	Theileria orientalis strain Shintoku	20715121
TOT_020000175	mRNA	TOT_020000175	NC_025261.1	369785	370941	R	TOT_020000175	complement(join(<369785..370133,370164..370496,370529..370600,370664..370758,370819..>370941))	Theileria orientalis strain Shintoku	20714348
TOT_020000176	mRNA	TOT_020000176	NC_025261.1	371159	371940	D	TOT_020000176	join(<371159..371458,371540..371590,371622..371749,371853..>371940)	Theileria orientalis strain Shintoku	20714349
TOT_020001031	mRNA	TOT_020001031	NC_025261.1	371986	373815	R	TOT_020001031	complement(join(<371986..372115,372180..372381,372460..372782,372864..373149,373181..373374,373406..>373815))	Theileria orientalis strain Shintoku	20715122
TOT_020000178	mRNA	TOT_020000178	NC_025261.1	374582	375778	D	TOT_020000178	<374582..>375778	Theileria orientalis strain Shintoku	20714350
TOT_020000179	mRNA	TOT_020000179	NC_025261.1	375816	376544	R	TOT_020000179	complement(join(<375816..375905,375940..376251,376290..376382,376419..>376544))	Theileria orientalis strain Shintoku	20714351
TOT_020001032	mRNA	TOT_020001032	NC_025261.1	376672	377616	D	TOT_020001032	<376672..>377616	Theileria orientalis strain Shintoku	20715123
TOT_020000180	mRNA	TOT_020000180	NC_025261.1	377591	378151	D	TOT_020000180	join(<377591..377674,377712..378030,378063..>378151)	Theileria orientalis strain Shintoku	20714352
TOT_020000181	mRNA	TOT_020000181	NC_025261.1	379178	383124	R	TOT_020000181	complement(join(<379178..379388,379608..379690,379881..380615,380675..380755,380942..381156,381323..383066,383107..>383124))	Theileria orientalis strain Shintoku	20714353
TOT_020000182	mRNA	TOT_020000182	NC_025261.1	383265	385724	D	TOT_020000182	join(<383265..383306,383449..383592,383642..383796,383826..385670,385709..>385724)	Theileria orientalis strain Shintoku	20714354
TOT_020000183	mRNA	TOT_020000183	NC_025261.1	385852	388667	R	TOT_020000183	complement(join(<385852..388456,388543..>388667))	Theileria orientalis strain Shintoku	20714355
TOT_020000184	mRNA	TOT_020000184	NC_025261.1	389009	389193	D	TOT_020000184	join(<389009..389093,389126..>389193)	Theileria orientalis strain Shintoku	20714356
TOT_020000185	mRNA	TOT_020000185	NC_025261.1	389278	390532	R	TOT_020000185	complement(join(<389278..389511,389556..389740,389851..389991,390024..390158,390192..390288,390386..>390532))	Theileria orientalis strain Shintoku	20714357
TOT_020000186	mRNA	TOT_020000186	NC_025261.1	390726	391169	D	TOT_020000186	<390726..>391169	Theileria orientalis strain Shintoku	20714358
TOT_020000187	mRNA	TOT_020000187	NC_025261.1	391241	392260	D	TOT_020000187	<391241..>392260	Theileria orientalis strain Shintoku	20714359
TOT_020000188	mRNA	TOT_020000188	NC_025261.1	392320	392868	R	TOT_020000188	complement(<392320..>392868)	Theileria orientalis strain Shintoku	20714360
TOT_020000189	mRNA	TOT_020000189	NC_025261.1	393015	394540	D	TOT_020000189	join(<393015..393480,393510..393706,393778..393906,393948..394043,394156..394236,394304..>394540)	Theileria orientalis strain Shintoku	20714361
TOT_020000190	mRNA	TOT_020000190	NC_025261.1	394618	395265	D	TOT_020000190	join(<394618..394685,394804..394927,394982..395110,395191..>395265)	Theileria orientalis strain Shintoku	20714362
TOT_020000191	mRNA	TOT_020000191	NC_025261.1	395589	396272	D	TOT_020000191	join(<395589..395617,395738..395881,395945..>396272)	Theileria orientalis strain Shintoku	20714363
TOT_020000192	mRNA	TOT_020000192	NC_025261.1	396418	396869	R	TOT_020000192	complement(join(<396418..396654,396714..>396869))	Theileria orientalis strain Shintoku	20714364
TOT_020000193	mRNA	TOT_020000193	NC_025261.1	396881	398026	R	TOT_020000193	complement(join(<396881..397105,397429..397503,397562..397631,397718..397854,397889..>398026))	Theileria orientalis strain Shintoku	20714365
TOT_020000194	mRNA	TOT_020000194	NC_025261.1	398514	399335	D	TOT_020000194	join(<398514..398746,398780..398849,398881..399235,399325..>399335)	Theileria orientalis strain Shintoku	20714366
TOT_020000195	mRNA	TOT_020000195	NC_025261.1	399374	401457	R	TOT_020000195	complement(join(<399374..400132,400678..>401457))	Theileria orientalis strain Shintoku	20714367
TOT_020000196	mRNA	TOT_020000196	NC_025261.1	401940	402725	R	TOT_020000196	complement(<401940..>402725)	Theileria orientalis strain Shintoku	20714368
TOT_020000197	mRNA	TOT_020000197	NC_025261.1	403215	403973	R	TOT_020000197	complement(<403215..>403973)	Theileria orientalis strain Shintoku	20714369
TOT_020000198	mRNA	TOT_020000198	NC_025261.1	404317	405126	R	TOT_020000198	complement(<404317..>405126)	Theileria orientalis strain Shintoku	20714370
TOT_020000199	mRNA	TOT_020000199	NC_025261.1	405981	406543	D	TOT_020000199	join(<405981..406232,406343..>406543)	Theileria orientalis strain Shintoku	20714371
TOT_020000200	mRNA	TOT_020000200	NC_025261.1	406877	408840	R	TOT_020000200	complement(join(<406877..407312,407384..407606,407717..408049,408158..408674,408778..>408840))	Theileria orientalis strain Shintoku	20714372
TOT_020000201	mRNA	TOT_020000201	NC_025261.1	408971	411661	D	TOT_020000201	join(<408971..409080,409135..>411661)	Theileria orientalis strain Shintoku	20714373
TOT_020000202	mRNA	TOT_020000202	NC_025261.1	411812	412324	R	TOT_020000202	complement(join(<411812..412042,412151..>412324))	Theileria orientalis strain Shintoku	20714374
TOT_020000203	mRNA	TOT_020000203	NC_025261.1	412508	413139	R	TOT_020000203	complement(join(<412508..412614,413091..>413139))	Theileria orientalis strain Shintoku	20714375
TOT_020000204	mRNA	TOT_020000204	NC_025261.1	413148	414833	D	TOT_020000204	<413148..>414833	Theileria orientalis strain Shintoku	20714376
TOT_020000205	mRNA	TOT_020000205	NC_025261.1	414942	416685	R	TOT_020000205	complement(join(<414942..415168,415311..415373,415663..415741,415772..415836,415936..416053,416086..416128,416272..416336,416413..416512,416606..>416685))	Theileria orientalis strain Shintoku	20714377
TOT_020001033	mRNA	TOT_020001033	NC_025261.1	416984	418267	R	TOT_020001033	complement(<416984..>418267)	Theileria orientalis strain Shintoku	20715124
TOT_020000207	mRNA	TOT_020000207	NC_025261.1	418936	420535	D	TOT_020000207	join(<418936..419220,419285..419476,419586..419685,419752..419945,420041..>420535)	Theileria orientalis strain Shintoku	20714378
TOT_020000208	mRNA	TOT_020000208	NC_025261.1	420952	421674	D	TOT_020000208	<420952..>421674	Theileria orientalis strain Shintoku	20714379
TOT_020000209	mRNA	TOT_020000209	NC_025261.1	422102	423558	R	TOT_020000209	complement(join(<422102..422221,422427..422488,422558..422629,422660..422717,422819..423188,423286..423353,423385..>423558))	Theileria orientalis strain Shintoku	20714380
TOT_020000210	mRNA	TOT_020000210	NC_025261.1	424103	425324	D	TOT_020000210	join(<424103..424219,424311..424817,424939..425008,425080..>425324)	Theileria orientalis strain Shintoku	20714381
TOT_020000211	mRNA	TOT_020000211	NC_025261.1	425572	426536	D	TOT_020000211	join(<425572..425652,425764..425845,425912..425976,426081..426229,426350..>426536)	Theileria orientalis strain Shintoku	20714382
TOT_020000212	mRNA	TOT_020000212	NC_025261.1	426656	430326	D	TOT_020000212	join(<426656..426703,426744..426866,427043..427726,427873..428073,428092..>430326)	Theileria orientalis strain Shintoku	20714383
TOT_020000213	mRNA	TOT_020000213	NC_025261.1	430373	430613	R	TOT_020000213	complement(join(<430373..430468,430539..>430613))	Theileria orientalis strain Shintoku	20714384
TOT_020000214	mRNA	TOT_020000214	NC_025261.1	431029	432843	D	TOT_020000214	<431029..>432843	Theileria orientalis strain Shintoku	20714385
TOT_020000215	mRNA	TOT_020000215	NC_025261.1	433276	440011	R	TOT_020000215	complement(join(<433276..433759,433832..434019,434139..434422,434498..434675,434907..435053,435110..435381,435413..435546,435741..436739,437052..438357,438463..>440011))	Theileria orientalis strain Shintoku	20714386
TOT_020000216	mRNA	TOT_020000216	NC_025261.1	440344	440502	D	TOT_020000216	<440344..>440502	Theileria orientalis strain Shintoku	20714387
TOT_020000217	mRNA	TOT_020000217	NC_025261.1	440590	441102	R	TOT_020000217	complement(<440590..>441102)	Theileria orientalis strain Shintoku	20714388
TOT_020000218	mRNA	TOT_020000218	NC_025261.1	441162	441600	R	TOT_020000218	complement(join(<441162..441316,441480..>441600))	Theileria orientalis strain Shintoku	20714389
TOT_020000998	mRNA	TOT_020000998	NC_025261.1	441975	444097	R	TOT_020000998	complement(join(<441975..442151,442186..442230,442336..442441,442502..442572,442607..442725,442818..442956,443067..443891,444035..>444097))	Theileria orientalis strain Shintoku	20715094
TOT_020000219	mRNA	TOT_020000219	NC_025261.1	444278	444625	D	TOT_020000219	join(<444278..444372,444437..444531,444576..>444625)	Theileria orientalis strain Shintoku	20714390
TOT_020000999	mRNA	TOT_020000999	NC_025261.1	444684	445452	R	TOT_020000999	complement(join(<444684..444788,444850..>445452))	Theileria orientalis strain Shintoku	20715095
TOT_020000220	mRNA	TOT_020000220	NC_025261.1	445594	448719	R	TOT_020000220	complement(<445594..>448719)	Theileria orientalis strain Shintoku	20714391
TOT_020000221	mRNA	TOT_020000221	NC_025261.1	448751	450378	R	TOT_020000221	complement(join(<448751..448808,448924..448998,449041..449153,449205..449299,449424..449564,449706..449876,449907..>450378))	Theileria orientalis strain Shintoku	20714392
TOT_020000222	mRNA	TOT_020000222	NC_025261.1	450394	451081	R	TOT_020000222	complement(join(<450394..450520,450591..450834,450891..450992,451027..>451081))	Theileria orientalis strain Shintoku	20714393
TOT_020000223	mRNA	TOT_020000223	NC_025261.1	451216	452058	D	TOT_020000223	join(<451216..451263,451330..451737,451769..451819,451948..>452058)	Theileria orientalis strain Shintoku	20714394
TOT_020001034	mRNA	TOT_020001034	NC_025261.1	452206	453325	R	TOT_020001034	complement(join(<452206..452297,452390..452498,452604..452689,452719..452760,452793..452861,452902..453024,453102..453157,453190..453230,453263..>453325))	Theileria orientalis strain Shintoku	20715125
TOT_020001035	mRNA	TOT_020001035	NC_025261.1	453750	456902	R	TOT_020001035	complement(join(<453750..454902,455099..455208,455286..455530,455778..456360,456442..456649,456796..>456902))	Theileria orientalis strain Shintoku	20715126
TOT_020000226	mRNA	TOT_020000226	NC_025261.1	458011	461256	D	TOT_020000226	join(<458011..458080,458376..458974,459134..459670,460113..460613,460957..>461256)	Theileria orientalis strain Shintoku	20714395
TOT_020001000	mRNA	TOT_020001000	NC_025261.1	462001	462643	D	TOT_020001000	join(<462001..462219,462271..462509,462556..>462643)	Theileria orientalis strain Shintoku	20715096
TOT_020001036	mRNA	TOT_020001036	NC_025261.1	462659	463504	D	TOT_020001036	<462659..>463504	Theileria orientalis strain Shintoku	20715127
TOT_020000227	mRNA	TOT_020000227	NC_025261.1	463881	465852	D	TOT_020000227	join(<463881..464299,464355..464461,464491..464642,464714..464925,464955..465173,465324..>465852)	Theileria orientalis strain Shintoku	20714396
TOT_020000228	mRNA	TOT_020000228	NC_025261.1	466313	468564	R	TOT_020000228	complement(join(<466313..466723,466857..467023,467174..467868,467898..468175,468290..468487,468532..>468564))	Theileria orientalis strain Shintoku	20714397
TOT_020001037	mRNA	TOT_020001037	NC_025261.1	469007	470191	D	TOT_020001037	<469007..>470191	Theileria orientalis strain Shintoku	20715128
TOT_020000230	mRNA	TOT_020000230	NC_025261.1	470423	472200	D	TOT_020000230	join(<470423..470476,470626..>472200)	Theileria orientalis strain Shintoku	20714398
TOT_020000231	mRNA	TOT_020000231	NC_025261.1	472307	475542	R	TOT_020000231	complement(join(<472307..472434,472527..472701,472794..473647,473768..475097,475177..>475542))	Theileria orientalis strain Shintoku	20714399
TOT_020000232	mRNA	TOT_020000232	NC_025261.1	475986	476574	R	TOT_020000232	complement(join(<475986..476092,476268..476380,476412..476507,476543..>476574))	Theileria orientalis strain Shintoku	20714400
TOT_020001038	mRNA	TOT_020001038	NC_025261.1	476825	477390	D	TOT_020001038	join(<476825..476954,476993..477317,477351..>477390)	Theileria orientalis strain Shintoku	20715129
TOT_020000234	mRNA	TOT_020000234	NC_025261.1	477398	477877	R	TOT_020000234	complement(join(<477398..477442,477474..477772,477805..>477877))	Theileria orientalis strain Shintoku	20714401
TOT_020000235	mRNA	TOT_020000235	NC_025261.1	477987	478733	R	TOT_020000235	complement(join(<477987..478134,478204..478318,478367..>478733))	Theileria orientalis strain Shintoku	20714402
TOT_020000236	mRNA	TOT_020000236	NC_025261.1	479244	479531	D	TOT_020000236	join(<479244..479313,479355..479439,479471..>479531)	Theileria orientalis strain Shintoku	20714403
TOT_020000237	mRNA	TOT_020000237	NC_025261.1	479789	479971	D	TOT_020000237	<479789..>479971	Theileria orientalis strain Shintoku	20714404
TOT_020000238	mRNA	TOT_020000238	NC_025261.1	480253	483828	R	TOT_020000238	complement(<480253..>483828)	Theileria orientalis strain Shintoku	20714405
TOT_020000239	mRNA	TOT_020000239	NC_025261.1	483982	488146	R	TOT_020000239	complement(join(<483982..484661,484713..484864,484894..485062,485093..485350,485380..485535,485653..485809,485842..485947,485982..486088,486184..486428,486460..486597,486628..486748,486759..487065,487095..487232,487263..487419,487769..487825,487864..>488146))	Theileria orientalis strain Shintoku	20714406
TOT_020000240	mRNA	TOT_020000240	NC_025261.1	488212	491766	R	TOT_020000240	complement(<488212..>491766)	Theileria orientalis strain Shintoku	20714407
TOT_020000241	mRNA	TOT_020000241	NC_025261.1	492202	493788	D	TOT_020000241	join(<492202..493411,493505..>493788)	Theileria orientalis strain Shintoku	20714408
TOT_020000242	mRNA	TOT_020000242	NC_025261.1	494114	494689	R	TOT_020000242	complement(join(<494114..494370,494402..494446,494476..>494689))	Theileria orientalis strain Shintoku	20714409
TOT_020000243	mRNA	TOT_020000243	NC_025261.1	494767	495717	R	TOT_020000243	complement(<494767..>495717)	Theileria orientalis strain Shintoku	20714410
TOT_020000244	mRNA	TOT_020000244	NC_025261.1	495751	498368	R	TOT_020000244	complement(join(<495751..496029,496129..496712,496832..>498368))	Theileria orientalis strain Shintoku	20714411
TOT_020000245	mRNA	TOT_020000245	NC_025261.1	498879	500168	R	TOT_020000245	complement(<498879..>500168)	Theileria orientalis strain Shintoku	20714412
TOT_020000246	mRNA	TOT_020000246	NC_025261.1	500313	502230	R	TOT_020000246	complement(join(<500313..500690,500722..501237,501299..501475,501506..501654,501685..501883,501913..>502230))	Theileria orientalis strain Shintoku	20714413
TOT_020000247	mRNA	TOT_020000247	NC_025261.1	502606	504908	D	TOT_020000247	join(<502606..503061,503091..503238,503269..503364,503396..503533,503604..503728,503759..503854,503902..504033,504063..504133,504184..504312,504345..504483,504513..>504908)	Theileria orientalis strain Shintoku	20714414
TOT_020000248	mRNA	TOT_020000248	NC_025261.1	505157	505907	R	TOT_020000248	complement(join(<505157..505611,505622..>505907))	Theileria orientalis strain Shintoku	20714415
TOT_020000249	mRNA	TOT_020000249	NC_025261.1	506027	507183	D	TOT_020000249	join(<506027..506146,506190..506315,506384..506423,506453..506531,506543..506827,506859..>507183)	Theileria orientalis strain Shintoku	20714416
TOT_020000250	mRNA	TOT_020000250	NC_025261.1	507345	509794	R	TOT_020000250	complement(join(<507345..507421,507454..507532,507563..507670,507705..507895,507928..507978,508019..508069,508102..508314,508344..508467,508569..508670,508701..508772,508803..508900,508930..509026,509141..509239,509274..509548,509581..>509794))	Theileria orientalis strain Shintoku	20714417
TOT_020000251	mRNA	TOT_020000251	NC_025261.1	509840	516164	R	TOT_020000251	complement(join(<509840..512896,512996..514009,514214..514384,514523..515835,515867..>516164))	Theileria orientalis strain Shintoku	20714418
TOT_020000252	mRNA	TOT_020000252	NC_025261.1	516555	518031	R	TOT_020000252	complement(join(<516555..516824,516857..517618,517675..517791,517821..517891,517923..>518031))	Theileria orientalis strain Shintoku	20714419
TOT_020000253	mRNA	TOT_020000253	NC_025261.1	518193	519804	R	TOT_020000253	complement(join(<518193..518375,518382..518511,518541..518632,518662..518796,518911..>519804))	Theileria orientalis strain Shintoku	20714420
TOT_020000254	mRNA	TOT_020000254	NC_025261.1	520021	520797	D	TOT_020000254	join(<520021..520080,520223..520356,520386..520569,520604..520708,520765..>520797)	Theileria orientalis strain Shintoku	20714421
TOT_020000255	mRNA	TOT_020000255	NC_025261.1	520809	521115	R	TOT_020000255	complement(join(<520809..520958,520989..521051,521083..>521115))	Theileria orientalis strain Shintoku	20714422
TOT_020000256	mRNA	TOT_020000256	NC_025261.1	521300	521660	R	TOT_020000256	complement(join(<521300..521348,521397..521500,521658..>521660))	Theileria orientalis strain Shintoku	20714423
TOT_020001039	mRNA	TOT_020001039	NC_025261.1	521890	522425	D	TOT_020001039	join(<521890..521963,522032..522217,522254..>522425)	Theileria orientalis strain Shintoku	20715130
TOT_020000258	mRNA	TOT_020000258	NC_025261.1	522669	526941	D	TOT_020000258	join(<522669..524415,524619..525551,525907..526655,526927..>526941)	Theileria orientalis strain Shintoku	20714424
TOT_020000259	mRNA	TOT_020000259	NC_025261.1	527765	527995	R	TOT_020000259	complement(join(<527765..527884,527954..>527995))	Theileria orientalis strain Shintoku	20714425
TOT_020000260	mRNA	TOT_020000260	NC_025261.1	528623	529579	D	TOT_020000260	<528623..>529579	Theileria orientalis strain Shintoku	20714426
TOT_020000261	mRNA	TOT_020000261	NC_025261.1	530153	530833	R	TOT_020000261	complement(<530153..>530833)	Theileria orientalis strain Shintoku	20714427
TOT_020000262	mRNA	TOT_020000262	NC_025261.1	531295	532386	D	TOT_020000262	join(<531295..531303,531611..531655,531687..531728,531757..>532386)	Theileria orientalis strain Shintoku	20714428
TOT_020000263	mRNA	TOT_020000263	NC_025261.1	532486	535458	D	TOT_020000263	<532486..>535458	Theileria orientalis strain Shintoku	20714429
TOT_020001040	mRNA	TOT_020001040	NC_025261.1	535707	537844	R	TOT_020001040	complement(join(<535707..535932,536035..536289,536416..536742,536965..537480,537601..537704,537734..>537844))	Theileria orientalis strain Shintoku	20715131
TOT_020001041	mRNA	TOT_020001041	NC_025261.1	538428	540257	R	TOT_020001041	complement(<538428..>540257)	Theileria orientalis strain Shintoku	20715132
TOT_020001042	mRNA	TOT_020001042	NC_025261.1	540730	543001	R	TOT_020001042	complement(join(<540730..540837,540869..541095,541126..541444,541478..542699,542748..>543001))	Theileria orientalis strain Shintoku	20715133
TOT_020000267	mRNA	TOT_020000267	NC_025261.1	543213	543765	D	TOT_020000267	join(<543213..543453,543488..543576,543607..>543765)	Theileria orientalis strain Shintoku	20714430
TOT_020000268	mRNA	TOT_020000268	NC_025261.1	543956	546090	R	TOT_020000268	complement(join(<543956..544478,544525..544775,544976..545125,545208..545348,545381..545516,545578..545825,545860..>546090))	Theileria orientalis strain Shintoku	20714431
TOT_020000269	mRNA	TOT_020000269	NC_025261.1	546374	547165	R	TOT_020000269	complement(join(<546374..546540,546576..546722,546763..>547165))	Theileria orientalis strain Shintoku	20714432
TOT_020000270	mRNA	TOT_020000270	NC_025261.1	547368	547977	R	TOT_020000270	complement(join(<547368..547398,547463..547593,547689..547739,547796..547904,547943..>547977))	Theileria orientalis strain Shintoku	20714433
TOT_020000271	mRNA	TOT_020000271	NC_025261.1	548239	550547	R	TOT_020000271	complement(join(<548239..548457,548480..548728,548806..548903,548933..549066,549097..549227,549261..549367,549397..549880,549951..>550547))	Theileria orientalis strain Shintoku	20714434
TOT_020000272	mRNA	TOT_020000272	NC_025261.1	550704	552164	R	TOT_020000272	complement(<550704..>552164)	Theileria orientalis strain Shintoku	20714435
TOT_020000273	mRNA	TOT_020000273	NC_025261.1	552887	553521	R	TOT_020000273	complement(join(<552887..553095,553127..553299,553331..>553521))	Theileria orientalis strain Shintoku	20714436
TOT_020000274	mRNA	TOT_020000274	NC_025261.1	553737	555750	D	TOT_020000274	join(<553737..553888,553920..554070,554100..554156,554187..554280,554309..554416,554446..554556,554593..555065,555103..555170,555235..555355,555388..555513,555550..>555750)	Theileria orientalis strain Shintoku	20714437
TOT_020000275	mRNA	TOT_020000275	NC_025261.1	555865	556513	R	TOT_020000275	complement(join(<555865..556119,556149..556302,556332..>556513))	Theileria orientalis strain Shintoku	20714438
TOT_020000276	mRNA	TOT_020000276	NC_025261.1	557105	557616	D	TOT_020000276	join(<557105..557125,557167..>557616)	Theileria orientalis strain Shintoku	20714439
TOT_020000277	mRNA	TOT_020000277	NC_025261.1	557847	560168	R	TOT_020000277	complement(join(<557847..558104,558140..558388,558646..558709,558744..558790,558831..558913,558955..559041,559079..559259,559293..559545,559575..559697,559741..559973,560049..>560168))	Theileria orientalis strain Shintoku	20714440
TOT_020000278	mRNA	TOT_020000278	NC_025261.1	560320	560601	D	TOT_020000278	<560320..>560601	Theileria orientalis strain Shintoku	20714441
TOT_020000279	mRNA	TOT_020000279	NC_025261.1	561154	561309	R	TOT_020000279	complement(<561154..>561309)	Theileria orientalis strain Shintoku	20714442
TOT_020000280	mRNA	TOT_020000280	NC_025261.1	561361	562791	D	TOT_020000280	<561361..>562791	Theileria orientalis strain Shintoku	20714443
TOT_020000281	mRNA	TOT_020000281	NC_025261.1	562944	563466	D	TOT_020000281	join(<562944..563140,563202..563278,563357..>563466)	Theileria orientalis strain Shintoku	20714444
TOT_020000282	mRNA	TOT_020000282	NC_025261.1	563939	564760	R	TOT_020000282	complement(join(<563939..564073,564105..564211,564243..564557,564715..>564760))	Theileria orientalis strain Shintoku	20714445
TOT_020000283	mRNA	TOT_020000283	NC_025261.1	565035	567365	R	TOT_020000283	complement(join(<565035..566213,566336..566804,566835..567052,567084..>567365))	Theileria orientalis strain Shintoku	20714446
TOT_020000284	mRNA	TOT_020000284	NC_025261.1	567610	568341	D	TOT_020000284	<567610..>568341	Theileria orientalis strain Shintoku	20714447
TOT_020000285	mRNA	TOT_020000285	NC_025261.1	568559	571190	R	TOT_020000285	complement(join(<568559..569987,570186..570685,570700..570847,570886..>571190))	Theileria orientalis strain Shintoku	20714448
TOT_020000286	mRNA	TOT_020000286	NC_025261.1	571473	571840	R	TOT_020000286	complement(join(<571473..571675,571717..>571840))	Theileria orientalis strain Shintoku	20714449
TOT_020000287	mRNA	TOT_020000287	NC_025261.1	572164	574311	R	TOT_020000287	complement(<572164..>574311)	Theileria orientalis strain Shintoku	20714450
TOT_020001043	mRNA	TOT_020001043	NC_025261.1	574883	575992	R	TOT_020001043	complement(<574883..>575992)	Theileria orientalis strain Shintoku	20715134
TOT_020000289	mRNA	TOT_020000289	NC_025261.1	576243	576975	D	TOT_020000289	join(<576243..576299,576337..576406,576474..576583,576651..576805,576843..>576975)	Theileria orientalis strain Shintoku	20714451
TOT_020000290	mRNA	TOT_020000290	NC_025261.1	577247	581793	R	TOT_020000290	complement(join(<577247..577459,577668..578327,578525..578633,578827..579042,579262..580221,580427..580843,580875..581144,581182..581560,581601..>581793))	Theileria orientalis strain Shintoku	20714452
TOT_020000291	mRNA	TOT_020000291	NC_025261.1	581893	583116	D	TOT_020000291	join(<581893..582112,582144..582289,582324..582388,582554..582623,582655..582779,582846..>583116)	Theileria orientalis strain Shintoku	20714453
TOT_020000292	mRNA	TOT_020000292	NC_025261.1	583238	585168	D	TOT_020000292	join(<583238..583420,583452..583572,583605..583759,583789..583858,583925..584104,584134..584201,584232..584482,584511..584592,584623..584697,584791..>585168)	Theileria orientalis strain Shintoku	20714454
TOT_020000293	mRNA	TOT_020000293	NC_025261.1	585417	585941	R	TOT_020000293	complement(<585417..>585941)	Theileria orientalis strain Shintoku	20714455
TOT_020000294	mRNA	TOT_020000294	NC_025261.1	586002	588107	R	TOT_020000294	complement(<586002..>588107)	Theileria orientalis strain Shintoku	20714456
TOT_020000295	mRNA	TOT_020000295	NC_025261.1	588984	591146	D	TOT_020000295	join(<588984..589948,589999..590107,590241..590360,590392..590505,590554..590616,590750..590839,590877..590977,591008..>591146)	Theileria orientalis strain Shintoku	20714457
TOT_020000296	mRNA	TOT_020000296	NC_025261.1	591187	591887	R	TOT_020000296	complement(join(<591187..591510,591540..>591887))	Theileria orientalis strain Shintoku	20714458
TOT_020000297	mRNA	TOT_020000297	NC_025261.1	591947	594002	D	TOT_020000297	join(<591947..592324,592367..592706,592774..>594002)	Theileria orientalis strain Shintoku	20714459
TOT_020000298	mRNA	TOT_020000298	NC_025261.1	594299	594795	D	TOT_020000298	join(<594299..594463,594517..>594795)	Theileria orientalis strain Shintoku	20714460
TOT_020000299	mRNA	TOT_020000299	NC_025261.1	595128	598274	R	TOT_020000299	complement(<595128..>598274)	Theileria orientalis strain Shintoku	20714461
TOT_020000300	mRNA	TOT_020000300	NC_025261.1	598703	599450	R	TOT_020000300	complement(join(<598703..598818,598851..598959,599005..599095,599133..599244,599282..599364,599395..>599450))	Theileria orientalis strain Shintoku	20714462
TOT_020000301	mRNA	TOT_020000301	NC_025261.1	599727	601621	D	TOT_020000301	join(<599727..600640,600805..600971,601086..601219,601232..>601621)	Theileria orientalis strain Shintoku	20714463
TOT_020000302	mRNA	TOT_020000302	NC_025261.1	601773	603493	D	TOT_020000302	join(<601773..602012,602054..602463,602839..>603493)	Theileria orientalis strain Shintoku	20714464
TOT_020000303	mRNA	TOT_020000303	NC_025261.1	603798	610705	R	TOT_020000303	complement(join(<603798..604018,604108..604332,604364..604578,604805..605190,605347..605475,609297..609426,609483..609665,609840..>610705))	Theileria orientalis strain Shintoku	20714465
TOT_020000304	mRNA	TOT_020000304	NC_025261.1	611339	611821	D	TOT_020000304	join(<611339..611348,611382..611497,611528..>611821)	Theileria orientalis strain Shintoku	20714466
TOT_020000305	mRNA	TOT_020000305	NC_025261.1	611974	613073	R	TOT_020000305	complement(join(<611974..612027,612061..612122,612230..612420,612526..>613073))	Theileria orientalis strain Shintoku	20714467
TOT_020000306	mRNA	TOT_020000306	NC_025261.1	613186	614979	D	TOT_020000306	join(<613186..613251,613283..613381,613413..613556,613835..613981,614049..614129,614160..614272,614350..614404,614451..614563,614678..614739,614830..614884,614916..>614979)	Theileria orientalis strain Shintoku	20714468
TOT_020000307	mRNA	TOT_020000307	NC_025261.1	615099	620911	D	TOT_020000307	join(<615099..615315,615345..615418,615448..615526,615558..615820,615936..616023,616097..616399,616434..617226,617263..618666,618764..619604,619638..619737,619827..620186,620271..620641,620789..>620911)	Theileria orientalis strain Shintoku	20714469
TOT_020000308	mRNA	TOT_020000308	NC_025261.1	621277	621942	R	TOT_020000308	complement(<621277..>621942)	Theileria orientalis strain Shintoku	20714470
TOT_020000309	mRNA	TOT_020000309	NC_025261.1	622306	624080	R	TOT_020000309	complement(join(<622306..623861,624059..>624080))	Theileria orientalis strain Shintoku	20714471
TOT_020000310	mRNA	TOT_020000310	NC_025261.1	624693	625262	R	TOT_020000310	complement(<624693..>625262)	Theileria orientalis strain Shintoku	20714472
TOT_020000311	mRNA	TOT_020000311	NC_025261.1	625881	627236	R	TOT_020000311	complement(join(<625881..626493,626698..>627236))	Theileria orientalis strain Shintoku	20714473
TOT_020000312	mRNA	TOT_020000312	NC_025261.1	627342	629999	R	TOT_020000312	complement(join(<627342..627817,627977..628597,628643..628817,628992..629233,629309..>629999))	Theileria orientalis strain Shintoku	20714474
TOT_020000313	mRNA	TOT_020000313	NC_025261.1	630336	630974	D	TOT_020000313	<630336..>630974	Theileria orientalis strain Shintoku	20714475
TOT_020000314	mRNA	TOT_020000314	NC_025261.1	631237	635482	R	TOT_020000314	complement(join(<631237..631316,631377..633097,633192..633252,633299..633787,633824..633985,634162..>635482))	Theileria orientalis strain Shintoku	20714476
TOT_020000315	mRNA	TOT_020000315	NC_025261.1	635710	637600	R	TOT_020000315	complement(join(<635710..635935,636084..637329,637411..>637600))	Theileria orientalis strain Shintoku	20714477
TOT_020000316	mRNA	TOT_020000316	NC_025261.1	637763	638716	D	TOT_020000316	join(<637763..637772,637804..637986,638051..638443,638553..>638716)	Theileria orientalis strain Shintoku	20714478
TOT_020000317	mRNA	TOT_020000317	NC_025261.1	638812	640618	D	TOT_020000317	join(<638812..638928,639000..639189,639261..639395,639471..639526,639558..639663,639723..639815,639897..639946,640004..640141,640250..640289,640320..>640618)	Theileria orientalis strain Shintoku	20714479
TOT_020000318	mRNA	TOT_020000318	NC_025261.1	641268	642865	D	TOT_020000318	join(<641268..641623,641717..641802,641863..642045,642110..642309,642396..642566,642602..>642865)	Theileria orientalis strain Shintoku	20714480
TOT_020000319	mRNA	TOT_020000319	NC_025261.1	643125	644870	R	TOT_020000319	complement(join(<643125..644711,644814..>644870))	Theileria orientalis strain Shintoku	20714481
TOT_020000320	mRNA	TOT_020000320	NC_025261.1	645118	647673	R	TOT_020000320	complement(join(<645118..645890,646134..646559,646782..>647673))	Theileria orientalis strain Shintoku	20714482
TOT_020000321	mRNA	TOT_020000321	NC_025261.1	648103	649630	R	TOT_020000321	complement(join(<648103..649429,649626..>649630))	Theileria orientalis strain Shintoku	20714483
TOT_020000322	mRNA	TOT_020000322	NC_025261.1	651145	651360	R	TOT_020000322	complement(<651145..>651360)	Theileria orientalis strain Shintoku	20714484
TOT_020000323	mRNA	TOT_020000323	NC_025261.1	651585	655286	D	TOT_020000323	join(<651585..653650,653681..>655286)	Theileria orientalis strain Shintoku	20714485
TOT_020001044	mRNA	TOT_020001044	NC_025261.1	655837	656421	R	TOT_020001044	complement(join(<655837..655869,655902..656074,656105..656224,656286..>656421))	Theileria orientalis strain Shintoku	20715135
TOT_020000325	mRNA	TOT_020000325	NC_025261.1	656552	657614	D	TOT_020000325	join(<656552..656886,656917..656963,657083..657225,657285..657474,657517..>657614)	Theileria orientalis strain Shintoku	20714486
TOT_020001045	mRNA	TOT_020001045	NC_025261.1	657839	661030	R	TOT_020001045	complement(join(<657839..658221,658312..659199,659311..659701,659756..660466,660594..660749,660881..>661030))	Theileria orientalis strain Shintoku	20715136
TOT_020001046	mRNA	TOT_020001046	NC_025261.1	661414	661924	D	TOT_020001046	join(<661414..661453,661521..661626,661690..>661924)	Theileria orientalis strain Shintoku	20715137
TOT_020001047	mRNA	TOT_020001047	NC_025261.1	662413	664929	D	TOT_020001047	join(<662413..663139,663273..663389,663489..663618,663721..663994,664192..664714,664823..>664929)	Theileria orientalis strain Shintoku	20715138
TOT_020001003	mRNA	TOT_020001003	NC_025261.1	665195	666770	D	TOT_020001003	join(<665195..665204,665338..>666770)	Theileria orientalis strain Shintoku	20715097
TOT_020000327	mRNA	TOT_020000327	NC_025261.1	667162	669021	D	TOT_020000327	<667162..>669021	Theileria orientalis strain Shintoku	20714487
TOT_020000328	mRNA	TOT_020000328	NC_025261.1	670564	675117	D	TOT_020000328	join(<670564..671040,671107..>675117)	Theileria orientalis strain Shintoku	20714488
TOT_020000329	mRNA	TOT_020000329	NC_025261.1	675899	676648	R	TOT_020000329	complement(join(<675899..675923,675987..>676648))	Theileria orientalis strain Shintoku	20714489
TOT_020001048	mRNA	TOT_020001048	NC_025261.1	676796	678496	D	TOT_020001048	join(<676796..676859,676893..676925,677075..677229,677365..677491,677536..677777,677888..678115,678218..678307,678413..>678496)	Theileria orientalis strain Shintoku	20715139
TOT_020000331	mRNA	TOT_020000331	NC_025261.1	678601	679115	R	TOT_020000331	complement(join(<678601..678645,678714..678854,678889..678945,679014..>679115))	Theileria orientalis strain Shintoku	20714490
TOT_020000332	mRNA	TOT_020000332	NC_025261.1	679197	682157	R	TOT_020000332	complement(join(<679197..679516,679694..>682157))	Theileria orientalis strain Shintoku	20714491
TOT_020000333	mRNA	TOT_020000333	NC_025261.1	682320	682771	D	TOT_020000333	join(<682320..682498,682529..682582,682614..682678,682713..>682771)	Theileria orientalis strain Shintoku	20714492
TOT_020001049	mRNA	TOT_020001049	NC_025261.1	682926	683652	R	TOT_020001049	complement(join(<682926..683043,683122..683150,683353..683505,683542..>683652))	Theileria orientalis strain Shintoku	20715140
TOT_020001050	mRNA	TOT_020001050	NC_025261.1	683801	685175	R	TOT_020001050	complement(join(<683801..684670,684765..684937,685049..>685175))	Theileria orientalis strain Shintoku	20715141
TOT_020001051	mRNA	TOT_020001051	NC_025261.1	685268	687432	R	TOT_020001051	complement(join(<685268..685701,685789..686527,686615..687254,687299..>687432))	Theileria orientalis strain Shintoku	20715142
TOT_020000337	mRNA	TOT_020000337	NC_025261.1	688090	689177	D	TOT_020000337	join(<688090..688788,688876..689021,689039..>689177)	Theileria orientalis strain Shintoku	20714493
TOT_020000338	mRNA	TOT_020000338	NC_025261.1	689537	691192	D	TOT_020000338	join(<689537..690416,690505..690906,690992..691049,691132..>691192)	Theileria orientalis strain Shintoku	20714494
TOT_020000339	mRNA	TOT_020000339	NC_025261.1	692129	693884	D	TOT_020000339	join(<692129..692534,692640..693103,693525..>693884)	Theileria orientalis strain Shintoku	20714495
TOT_020000340	mRNA	TOT_020000340	NC_025261.1	693516	697532	R	TOT_020000340	complement(join(<693516..693620,693743..693915,694037..695982,696046..>697532))	Theileria orientalis strain Shintoku	20714496
TOT_020001004	mRNA	TOT_020001004	NC_025261.1	697830	699591	D	TOT_020001004	join(<697830..697978,698091..698295,698327..698557,698691..698846,698882..698956,699082..699155,699234..>699591)	Theileria orientalis strain Shintoku	20715098
TOT_020001005	mRNA	TOT_020001005	NC_025261.1	700120	701743	D	TOT_020001005	join(<700120..700497,700662..700847,700882..701181,701390..>701743)	Theileria orientalis strain Shintoku	20715099
TOT_020000342	mRNA	TOT_020000342	NC_025261.1	702430	705282	D	TOT_020000342	<702430..>705282	Theileria orientalis strain Shintoku	20714497
TOT_020000343	mRNA	TOT_020000343	NC_025261.1	705919	707367	D	TOT_020000343	<705919..>707367	Theileria orientalis strain Shintoku	20714498
TOT_020000344	mRNA	TOT_020000344	NC_025261.1	708007	709788	D	TOT_020000344	join(<708007..708063,708125..708272,708332..708559,708623..708724,708781..708882,708898..709154,709313..709487,709521..709712,709745..>709788)	Theileria orientalis strain Shintoku	20714499
TOT_020000345	mRNA	TOT_020000345	NC_025261.1	710078	711975	R	TOT_020000345	complement(join(<710078..710362,710557..710635,710671..710736,710847..710887,710987..711088,711118..711243,711276..711353,711474..711530,711587..711661,711695..711773,711842..>711975))	Theileria orientalis strain Shintoku	20714500
TOT_020000346	mRNA	TOT_020000346	NC_025261.1	712175	712651	D	TOT_020000346	join(<712175..712401,712452..712525,712596..>712651)	Theileria orientalis strain Shintoku	20714501
TOT_020000347	mRNA	TOT_020000347	NC_025261.1	712724	713413	R	TOT_020000347	complement(join(<712724..712915,712967..713092,713123..713308,713351..>713413))	Theileria orientalis strain Shintoku	20714502
TOT_020001052	mRNA	TOT_020001052	NC_025261.1	713523	715627	D	TOT_020001052	join(<713523..713732,713776..713939,713970..714072,714157..714295,714328..714371,714442..714491,714542..714635,714701..714762,714792..714869,714905..714974,715124..715215,715252..715360,715499..>715627)	Theileria orientalis strain Shintoku	20715143
TOT_020000349	mRNA	TOT_020000349	NC_025261.1	715775	716295	R	TOT_020000349	complement(join(<715775..715946,716045..716122,716153..>716295))	Theileria orientalis strain Shintoku	20714503
TOT_020000350	mRNA	TOT_020000350	NC_025261.1	716589	720305	D	TOT_020000350	join(<716589..717405,717518..717676,717745..719406,719440..719487,719719..>720305)	Theileria orientalis strain Shintoku	20714504
TOT_020000351	mRNA	TOT_020000351	NC_025261.1	720721	724607	D	TOT_020000351	join(<720721..722539,722800..>724607)	Theileria orientalis strain Shintoku	20714505
TOT_020000352	mRNA	TOT_020000352	NC_025261.1	724784	725127	D	TOT_020000352	join(<724784..724855,725056..>725127)	Theileria orientalis strain Shintoku	20714506
TOT_020000353	mRNA	TOT_020000353	NC_025261.1	725916	726485	D	TOT_020000353	<725916..>726485	Theileria orientalis strain Shintoku	20714507
TOT_020000354	mRNA	TOT_020000354	NC_025261.1	726802	727333	R	TOT_020000354	complement(join(<726802..727089,727160..>727333))	Theileria orientalis strain Shintoku	20714508
TOT_020000355	mRNA	TOT_020000355	NC_025261.1	727740	730460	R	TOT_020000355	complement(join(<727740..727822,727858..728343,728374..730242,730274..>730460))	Theileria orientalis strain Shintoku	20714509
TOT_020000356	mRNA	TOT_020000356	NC_025261.1	730995	732545	D	TOT_020000356	join(<730995..731255,731305..731844,731927..732172,732253..732415,732448..>732545)	Theileria orientalis strain Shintoku	20714510
TOT_020000357	mRNA	TOT_020000357	NC_025261.1	732717	733229	R	TOT_020000357	complement(<732717..>733229)	Theileria orientalis strain Shintoku	20714511
TOT_020000358	mRNA	TOT_020000358	NC_025261.1	733340	734339	R	TOT_020000358	complement(join(<733340..733590,733651..734250,734282..>734339))	Theileria orientalis strain Shintoku	20714512
TOT_020000359	mRNA	TOT_020000359	NC_025261.1	734557	735444	D	TOT_020000359	join(<734557..734583,734725..735040,735072..735268,735325..>735444)	Theileria orientalis strain Shintoku	20714513
TOT_020001053	mRNA	TOT_020001053	NC_025261.1	736327	737124	R	TOT_020001053	complement(join(<736327..736815,736900..>737124))	Theileria orientalis strain Shintoku	20715144
TOT_020001054	mRNA	TOT_020001054	NC_025261.1	737298	738130	R	TOT_020001054	complement(join(<737298..737767,737866..>738130))	Theileria orientalis strain Shintoku	20715145
TOT_020001055	mRNA	TOT_020001055	NC_025261.1	738345	739850	R	TOT_020001055	complement(join(<738345..738813,738903..739112,739236..739369,739404..>739850))	Theileria orientalis strain Shintoku	20715146
TOT_020000363	mRNA	TOT_020000363	NC_025261.1	740160	741359	D	TOT_020000363	join(<740160..740575,740608..740658,740726..>741359)	Theileria orientalis strain Shintoku	20714514
TOT_020000364	mRNA	TOT_020000364	NC_025261.1	742102	743119	R	TOT_020000364	complement(join(<742102..742170,742223..742316,742493..742554,742586..742644,742677..742819,742857..742977,743050..>743119))	Theileria orientalis strain Shintoku	20714515
TOT_020000365	mRNA	TOT_020000365	NC_025261.1	743267	743662	R	TOT_020000365	complement(join(<743267..743343,743376..743466,743498..>743662))	Theileria orientalis strain Shintoku	20714516
TOT_020000366	mRNA	TOT_020000366	NC_025261.1	744361	744762	D	TOT_020000366	<744361..>744762	Theileria orientalis strain Shintoku	20714517
TOT_020000367	mRNA	TOT_020000367	NC_025261.1	744857	745408	R	TOT_020000367	complement(join(<744857..744979,745010..>745408))	Theileria orientalis strain Shintoku	20714518
TOT_020000368	mRNA	TOT_020000368	NC_025261.1	745567	746719	D	TOT_020000368	join(<745567..745766,745798..745929,745960..746023,746054..746233,746265..746340,746512..746610,746640..>746719)	Theileria orientalis strain Shintoku	20714519
TOT_020000369	mRNA	TOT_020000369	NC_025261.1	746957	748332	R	TOT_020000369	complement(join(<746957..747223,747313..747467,747550..747703,747765..747863,747906..748033,748067..748177,748266..>748332))	Theileria orientalis strain Shintoku	20714520
TOT_020000370	mRNA	TOT_020000370	NC_025261.1	748750	750068	R	TOT_020000370	complement(join(<748750..748945,749182..>750068))	Theileria orientalis strain Shintoku	20714521
TOT_020000371	mRNA	TOT_020000371	NC_025261.1	751097	753388	R	TOT_020000371	complement(join(<751097..751392,751425..751504,751568..751677,751973..752086,752280..752796,752886..>753388))	Theileria orientalis strain Shintoku	20714522
TOT_020000372	mRNA	TOT_020000372	NC_025261.1	754084	754735	D	TOT_020000372	join(<754084..754274,754306..>754735)	Theileria orientalis strain Shintoku	20714523
TOT_020000373	mRNA	TOT_020000373	NC_025261.1	755091	756467	D	TOT_020000373	join(<755091..755097,755108..755284,755400..756042,756182..756341,756372..>756467)	Theileria orientalis strain Shintoku	20714524
TOT_020000374	mRNA	TOT_020000374	NC_025261.1	756938	760651	D	TOT_020000374	join(<756938..758446,758630..759648,759694..760191,760393..>760651)	Theileria orientalis strain Shintoku	20714525
TOT_020000375	mRNA	TOT_020000375	NC_025261.1	760796	761809	R	TOT_020000375	complement(join(<760796..760894,760921..761028,761060..761172,761208..761316,761348..761409,761441..761497,761532..761581,761613..>761809))	Theileria orientalis strain Shintoku	20714526
TOT_020000376	mRNA	TOT_020000376	NC_025261.1	761922	762525	R	TOT_020000376	complement(join(<761922..762111,762166..762250,762320..762377,762412..>762525))	Theileria orientalis strain Shintoku	20714527
TOT_020001056	mRNA	TOT_020001056	NC_025261.1	763327	764313	D	TOT_020001056	join(<763327..763393,763436..763570,763604..>764313)	Theileria orientalis strain Shintoku	20715147
TOT_020000378	mRNA	TOT_020000378	NC_025261.1	764589	768863	D	TOT_020000378	join(<764589..768776,768807..>768863)	Theileria orientalis strain Shintoku	20714528
TOT_020000379	mRNA	TOT_020000379	NC_025261.1	768894	769190	R	TOT_020000379	complement(join(<768894..768905,768951..>769190))	Theileria orientalis strain Shintoku	20714529
TOT_020000380	mRNA	TOT_020000380	NC_025261.1	769291	772635	R	TOT_020000380	complement(join(<769291..770921,771015..771281,771316..771744,771774..>772635))	Theileria orientalis strain Shintoku	20714530
TOT_020000381	mRNA	TOT_020000381	NC_025261.1	772955	776304	D	TOT_020000381	join(<772955..772979,773011..773807,773813..774127,774162..774700,774782..775174,775366..775489,775524..775777,775807..775942,775984..>776304)	Theileria orientalis strain Shintoku	20714531
TOT_020000382	mRNA	TOT_020000382	NC_025261.1	777237	781889	D	TOT_020000382	<777237..>781889	Theileria orientalis strain Shintoku	20714532
TOT_020000383	mRNA	TOT_020000383	NC_025261.1	781948	783846	R	TOT_020000383	complement(join(<781948..782081,782216..782277,782308..782462,782600..782797,782827..782934,782975..783404,783422..783584,783621..>783846))	Theileria orientalis strain Shintoku	20714533
TOT_020000384	mRNA	TOT_020000384	NC_025261.1	784552	789159	D	TOT_020000384	<784552..>789159	Theileria orientalis strain Shintoku	20714534
TOT_020000385	mRNA	TOT_020000385	NC_025261.1	789855	794516	D	TOT_020000385	<789855..>794516	Theileria orientalis strain Shintoku	20714535
TOT_020000386	mRNA	TOT_020000386	NC_025261.1	794644	795204	R	TOT_020000386	complement(join(<794644..794862,794895..795074,795178..>795204))	Theileria orientalis strain Shintoku	20714536
TOT_020000387	mRNA	TOT_020000387	NC_025261.1	795456	797018	D	TOT_020000387	join(<795456..795503,795574..795657,795687..795794,795828..795864,795876..796036,796085..796147,796176..796371,796403..796510,796545..796643,796785..796888,796920..>797018)	Theileria orientalis strain Shintoku	20714537
TOT_020000388	mRNA	TOT_020000388	NC_025261.1	797145	798136	D	TOT_020000388	join(<797145..797487,797529..797673,797989..>798136)	Theileria orientalis strain Shintoku	20714538
TOT_020000389	mRNA	TOT_020000389	NC_025261.1	798184	799332	R	TOT_020000389	complement(join(<798184..798288,798321..798593,798624..798861,798893..799012,799097..>799332))	Theileria orientalis strain Shintoku	20714539
TOT_020000390	mRNA	TOT_020000390	NC_025261.1	799832	800254	R	TOT_020000390	complement(join(<799832..799980,800022..800117,800152..>800254))	Theileria orientalis strain Shintoku	20714540
TOT_020000391	mRNA	TOT_020000391	NC_025261.1	801002	802652	D	TOT_020000391	join(<801002..801060,801078..801550,801579..801813,801844..802026,802125..802281,802311..802433,802476..>802652)	Theileria orientalis strain Shintoku	20714541
TOT_020000392	mRNA	TOT_020000392	NC_025261.1	803031	804122	D	TOT_020000392	<803031..>804122	Theileria orientalis strain Shintoku	20714542
TOT_020000393	mRNA	TOT_020000393	NC_025261.1	804519	807580	R	TOT_020000393	complement(join(<804519..804605,804636..804717,804887..804998,805099..806015,806283..>807580))	Theileria orientalis strain Shintoku	20714543
TOT_020000394	mRNA	TOT_020000394	NC_025261.1	808679	809113	D	TOT_020000394	<808679..>809113	Theileria orientalis strain Shintoku	20714544
TOT_020000395	mRNA	TOT_020000395	NC_025261.1	810010	812928	D	TOT_020000395	join(<810010..811200,811329..811628,811723..811827,811864..812057,812079..812678,812717..812819,812863..>812928)	Theileria orientalis strain Shintoku	20714545
TOT_020000396	mRNA	TOT_020000396	NC_025261.1	812961	814631	D	TOT_020000396	join(<812961..813743,813909..814277,814369..814520,814553..>814631)	Theileria orientalis strain Shintoku	20714546
TOT_020000397	mRNA	TOT_020000397	NC_025261.1	814742	815044	D	TOT_020000397	<814742..>815044	Theileria orientalis strain Shintoku	20714547
TOT_020000398	mRNA	TOT_020000398	NC_025261.1	815274	817373	R	TOT_020000398	complement(join(<815274..816503,816558..>817373))	Theileria orientalis strain Shintoku	20714548
TOT_020000399	mRNA	TOT_020000399	NC_025261.1	817799	819765	R	TOT_020000399	complement(join(<817799..817989,818023..818278,818396..818613,818661..818777,818810..818998,819039..819147,819178..819342,819402..819569,819604..>819765))	Theileria orientalis strain Shintoku	20714549
TOT_020000400	mRNA	TOT_020000400	NC_025261.1	820387	825394	D	TOT_020000400	join(<820387..820649,820731..821084,821116..821356,821389..821475,821614..821879,821920..822206,822236..822316,822347..822477,822518..822583,822614..822691,822733..823517,823587..824172,824273..>825394)	Theileria orientalis strain Shintoku	20714550
TOT_020000401	mRNA	TOT_020000401	NC_025261.1	825491	826618	D	TOT_020000401	<825491..>826618	Theileria orientalis strain Shintoku	20714551
TOT_020000402	mRNA	TOT_020000402	NC_025261.1	826779	827652	R	TOT_020000402	complement(join(<826779..827002,827036..827143,827238..>827652))	Theileria orientalis strain Shintoku	20714552
TOT_020000403	mRNA	TOT_020000403	NC_025261.1	827926	829983	R	TOT_020000403	complement(<827926..>829983)	Theileria orientalis strain Shintoku	20714553
TOT_020000404	mRNA	TOT_020000404	NC_025261.1	830404	832947	D	TOT_020000404	join(<830404..831972,832004..832411,832537..832770,832801..>832947)	Theileria orientalis strain Shintoku	20714554
TOT_020000405	mRNA	TOT_020000405	NC_025261.1	833095	835498	R	TOT_020000405	complement(join(<833095..834184,834266..834633,834670..834878,834911..835192,835387..>835498))	Theileria orientalis strain Shintoku	20714555
TOT_020001057	mRNA	TOT_020001057	NC_025261.1	835662	837653	R	TOT_020001057	complement(join(<835662..835768,835799..836131,836162..836218,836251..836336,836414..836566,836598..836647,836710..837029,837060..837114,837147..837241,837271..837410,837441..837541,837633..>837653))	Theileria orientalis strain Shintoku	20715148
TOT_020000407	mRNA	TOT_020000407	NC_025261.1	838027	841280	D	TOT_020000407	join(<838027..840548,840742..841116,841256..>841280)	Theileria orientalis strain Shintoku	20714556
TOT_020001006	mRNA	TOT_020001006	NC_025261.1	841325	841930	D	TOT_020001006	join(<841325..841596,841639..>841930)	Theileria orientalis strain Shintoku	20715100
TOT_020000408	mRNA	TOT_020000408	NC_025261.1	841965	842433	R	TOT_020000408	complement(join(<841965..842337,842378..>842433))	Theileria orientalis strain Shintoku	20714557
TOT_020000409	mRNA	TOT_020000409	NC_025261.1	842923	843557	D	TOT_020000409	join(<842923..843213,843246..>843557)	Theileria orientalis strain Shintoku	20714558
TOT_020000410	mRNA	TOT_020000410	NC_025261.1	843925	846072	D	TOT_020000410	<843925..>846072	Theileria orientalis strain Shintoku	20714559
TOT_020000411	mRNA	TOT_020000411	NC_025261.1	846193	851661	R	TOT_020000411	complement(join(<846193..847075,847211..849214,849419..>851661))	Theileria orientalis strain Shintoku	20714560
TOT_020000412	mRNA	TOT_020000412	NC_025261.1	851951	853489	R	TOT_020000412	complement(<851951..>853489)	Theileria orientalis strain Shintoku	20714561
TOT_020000413	mRNA	TOT_020000413	NC_025261.1	853821	854273	D	TOT_020000413	<853821..>854273	Theileria orientalis strain Shintoku	20714562
TOT_020000414	mRNA	TOT_020000414	NC_025261.1	854439	856214	R	TOT_020000414	complement(join(<854439..855881,855913..856008,856077..>856214))	Theileria orientalis strain Shintoku	20714563
TOT_020000415	mRNA	TOT_020000415	NC_025261.1	857326	858765	D	TOT_020000415	<857326..>858765	Theileria orientalis strain Shintoku	20714564
TOT_020000416	mRNA	TOT_020000416	NC_025261.1	858927	859319	R	TOT_020000416	complement(<858927..>859319)	Theileria orientalis strain Shintoku	20714565
TOT_020000417	mRNA	TOT_020000417	NC_025261.1	859742	860448	D	TOT_020000417	join(<859742..859886,859919..>860448)	Theileria orientalis strain Shintoku	20714566
TOT_020000418	mRNA	TOT_020000418	NC_025261.1	860450	861249	R	TOT_020000418	complement(join(<860450..860545,860668..860771,860910..>861249))	Theileria orientalis strain Shintoku	20714567
TOT_020000419	mRNA	TOT_020000419	NC_025261.1	861609	864121	R	TOT_020000419	complement(join(<861609..863063,863219..863431,863468..>864121))	Theileria orientalis strain Shintoku	20714568
TOT_020000420	mRNA	TOT_020000420	NC_025261.1	864613	867123	D	TOT_020000420	join(<864613..864837,864889..865847,865887..866121,866185..866292,866351..866443,866483..866552,866641..866824,866856..866988,867049..>867123)	Theileria orientalis strain Shintoku	20714569
TOT_020000421	mRNA	TOT_020000421	NC_025261.1	867656	868812	D	TOT_020000421	join(<867656..868276,868363..>868812)	Theileria orientalis strain Shintoku	20714570
TOT_020000422	mRNA	TOT_020000422	NC_025261.1	869213	870298	D	TOT_020000422	join(<869213..869467,869519..869601,869629..>870298)	Theileria orientalis strain Shintoku	20714571
TOT_020000423	mRNA	TOT_020000423	NC_025261.1	870539	871652	D	TOT_020000423	join(<870539..870687,870728..870801,870944..871046,871153..871235,871330..>871652)	Theileria orientalis strain Shintoku	20714572
TOT_020000424	mRNA	TOT_020000424	NC_025261.1	871794	874110	R	TOT_020000424	complement(join(<871794..872015,872048..872342,872482..872575,872726..872834,872884..872947,872979..873265,873343..873404,873436..873793,873834..873980,873991..>874110))	Theileria orientalis strain Shintoku	20714573
TOT_020000425	mRNA	TOT_020000425	NC_025261.1	874141	876660	R	TOT_020000425	complement(<874141..>876660)	Theileria orientalis strain Shintoku	20714574
TOT_020000426	mRNA	TOT_020000426	NC_025261.1	877657	878421	R	TOT_020000426	complement(<877657..>878421)	Theileria orientalis strain Shintoku	20714575
TOT_020000427	mRNA	TOT_020000427	NC_025261.1	878658	879422	D	TOT_020000427	<878658..>879422	Theileria orientalis strain Shintoku	20714576
TOT_020000428	mRNA	TOT_020000428	NC_025261.1	879487	882308	R	TOT_020000428	complement(join(<879487..879502,879766..879982,880056..880126,880168..880523,880612..881137,881531..882023,882053..>882308))	Theileria orientalis strain Shintoku	20714577
TOT_020000429	mRNA	TOT_020000429	NC_025261.1	882690	884467	D	TOT_020000429	join(<882690..882830,882860..882931,882964..883103,883134..883236,883269..883364,883412..883594,883633..883916,883949..884016,884132..884223,884255..>884467)	Theileria orientalis strain Shintoku	20714578
TOT_020000430	mRNA	TOT_020000430	NC_025261.1	884672	885642	D	TOT_020000430	join(<884672..884891,884947..885035,885069..885145,885177..885295,885330..885391,885426..885517,885549..>885642)	Theileria orientalis strain Shintoku	20714579
TOT_020000431	mRNA	TOT_020000431	NC_025261.1	886358	886825	D	TOT_020000431	join(<886358..886411,886478..886559,886596..>886825)	Theileria orientalis strain Shintoku	20714580
TOT_020000432	mRNA	TOT_020000432	NC_025261.1	886889	888247	R	TOT_020000432	complement(join(<886889..887049,887196..887442,887474..>888247))	Theileria orientalis strain Shintoku	20714581
TOT_020000433	mRNA	TOT_020000433	NC_025261.1	888492	890066	R	TOT_020000433	complement(join(<888492..888590,888621..888767,888808..889140,889181..889409,889442..889523,889558..889858,889891..889953,890001..>890066))	Theileria orientalis strain Shintoku	20714582
TOT_020000434	mRNA	TOT_020000434	NC_025261.1	890518	891533	R	TOT_020000434	complement(join(<890518..890766,890798..890907,891055..891223,891255..>891533))	Theileria orientalis strain Shintoku	20714583
TOT_020000435	mRNA	TOT_020000435	NC_025261.1	892348	894106	D	TOT_020000435	join(<892348..892696,892818..>894106)	Theileria orientalis strain Shintoku	20714584
TOT_020000436	mRNA	TOT_020000436	NC_025261.1	894546	897026	D	TOT_020000436	join(<894546..896640,896854..>897026)	Theileria orientalis strain Shintoku	20714585
TOT_020000437	mRNA	TOT_020000437	NC_025261.1	897028	897575	R	TOT_020000437	complement(join(<897028..897234,897264..>897575))	Theileria orientalis strain Shintoku	20714586
TOT_020000438	mRNA	TOT_020000438	NC_025261.1	897922	900279	D	TOT_020000438	<897922..>900279	Theileria orientalis strain Shintoku	20714587
TOT_020000439	mRNA	TOT_020000439	NC_025261.1	900588	902522	D	TOT_020000439	join(<900588..900652,900772..901112,901234..901447,901490..>902522)	Theileria orientalis strain Shintoku	20714588
TOT_020000440	mRNA	TOT_020000440	NC_025261.1	902962	905539	D	TOT_020000440	join(<902962..905146,905367..>905539)	Theileria orientalis strain Shintoku	20714589
TOT_020000441	mRNA	TOT_020000441	NC_025261.1	906099	907076	D	TOT_020000441	<906099..>907076	Theileria orientalis strain Shintoku	20714590
TOT_020000442	mRNA	TOT_020000442	NC_025261.1	907273	908542	R	TOT_020000442	complement(join(<907273..908005,908145..>908542))	Theileria orientalis strain Shintoku	20714591
TOT_020000443	mRNA	TOT_020000443	NC_025261.1	908741	910983	D	TOT_020000443	join(<908741..909237,909301..909380,909627..909793,909955..910085,910249..910371,910401..910596,910693..>910983)	Theileria orientalis strain Shintoku	20714592
TOT_020000444	mRNA	TOT_020000444	NC_025261.1	911833	913868	D	TOT_020000444	join(<911833..912201,912266..912356,912405..912671,912807..913103,913215..913536,913634..>913868)	Theileria orientalis strain Shintoku	20714593
TOT_020001058	mRNA	TOT_020001058	NC_025261.1	919095	920865	D	TOT_020001058	join(<919095..919147,919231..919265,919298..919494,919525..919774,920012..920093,920244..920625,920698..>920865)	Theileria orientalis strain Shintoku	20715149
TOT_020000446	mRNA	TOT_020000446	NC_025261.1	921243	923862	R	TOT_020000446	complement(join(<921243..921455,921670..921879,922022..922124,922217..>923862))	Theileria orientalis strain Shintoku	20714594
TOT_020000447	mRNA	TOT_020000447	NC_025261.1	924267	924591	D	TOT_020000447	join(<924267..924353,924397..>924591)	Theileria orientalis strain Shintoku	20714595
TOT_020000448	mRNA	TOT_020000448	NC_025261.1	924684	926870	R	TOT_020000448	complement(join(<924684..924816,924847..924904,924937..925300,925446..925756,926074..926145,926248..926421,926575..926723,926770..>926870))	Theileria orientalis strain Shintoku	20714596
TOT_020001059	mRNA	TOT_020001059	NC_025261.1	928424	930717	D	TOT_020001059	join(<928424..928828,928919..929528,929750..>930717)	Theileria orientalis strain Shintoku	20715150
TOT_020000450	mRNA	TOT_020000450	NC_025261.1	931022	932443	D	TOT_020000450	join(<931022..931341,931373..931625,931656..931751,931994..932232,932338..>932443)	Theileria orientalis strain Shintoku	20714597
TOT_020000451	mRNA	TOT_020000451	NC_025261.1	932459	932837	R	TOT_020000451	complement(join(<932459..932703,932723..>932837))	Theileria orientalis strain Shintoku	20714598
TOT_020000452	mRNA	TOT_020000452	NC_025261.1	932959	933346	D	TOT_020000452	join(<932959..932993,933035..933083,933284..>933346)	Theileria orientalis strain Shintoku	20714599
TOT_020000453	mRNA	TOT_020000453	NC_025261.1	933470	934866	R	TOT_020000453	complement(join(<933470..934693,934771..>934866))	Theileria orientalis strain Shintoku	20714600
TOT_020000454	mRNA	TOT_020000454	NC_025261.1	935447	936409	R	TOT_020000454	complement(<935447..>936409)	Theileria orientalis strain Shintoku	20714601
TOT_020000455	mRNA	TOT_020000455	NC_025261.1	936471	942904	R	TOT_020000455	complement(join(<936471..938023,938146..>942904))	Theileria orientalis strain Shintoku	20714602
TOT_020000456	mRNA	TOT_020000456	NC_025261.1	943366	946011	R	TOT_020000456	complement(join(<943366..943425,943462..944754,944875..945396,945409..945582,945633..945881,945961..>946011))	Theileria orientalis strain Shintoku	20714603
TOT_020000457	mRNA	TOT_020000457	NC_025261.1	946737	947325	D	TOT_020000457	join(<946737..946861,946971..947058,947173..>947325)	Theileria orientalis strain Shintoku	20714604
TOT_020000458	mRNA	TOT_020000458	NC_025261.1	947457	949296	D	TOT_020000458	join(<947457..947681,947769..947864,947890..948006,948132..948261,948294..948366,948397..948468,948499..948572,948632..948756,948790..948859,948892..948952,949077..>949296)	Theileria orientalis strain Shintoku	20714605
TOT_020000459	mRNA	TOT_020000459	NC_025261.1	949603	950749	D	TOT_020000459	join(<949603..949758,949976..>950749)	Theileria orientalis strain Shintoku	20714606
TOT_020001060	mRNA	TOT_020001060	NC_025261.1	950909	952015	R	TOT_020001060	complement(join(<950909..951167,951246..951370,951463..951561,951593..>952015))	Theileria orientalis strain Shintoku	20715151
TOT_020000461	mRNA	TOT_020000461	NC_025261.1	952245	952952	R	TOT_020000461	complement(<952245..>952952)	Theileria orientalis strain Shintoku	20714607
TOT_020000462	mRNA	TOT_020000462	NC_025261.1	953065	953676	R	TOT_020000462	complement(join(<953065..953447,953478..953590,953621..>953676))	Theileria orientalis strain Shintoku	20714608
TOT_020001061	mRNA	TOT_020001061	NC_025261.1	954811	956392	D	TOT_020001061	join(<954811..954958,955015..955087,955155..955278,955429..955569,955606..955860,955951..956049,956136..956231,956312..>956392)	Theileria orientalis strain Shintoku	20715152
TOT_020000464	mRNA	TOT_020000464	NC_025261.1	956450	959199	D	TOT_020000464	join(<956450..956479,956519..956652,956719..956826,956881..957105,957150..957272,957305..957407,957505..958080,958239..958412,958564..958773,958861..>959199)	Theileria orientalis strain Shintoku	20714609
TOT_020000465	mRNA	TOT_020000465	NC_025261.1	959478	960252	R	TOT_020000465	complement(join(<959478..959606,959683..959739,959771..959848,959910..959963,960058..960122,960204..>960252))	Theileria orientalis strain Shintoku	20714610
TOT_020000466	mRNA	TOT_020000466	NC_025261.1	960383	961127	R	TOT_020000466	complement(join(<960383..960583,960621..>961127))	Theileria orientalis strain Shintoku	20714611
TOT_020000467	mRNA	TOT_020000467	NC_025261.1	961234	963676	D	TOT_020000467	join(<961234..961527,961607..962012,962088..>963676)	Theileria orientalis strain Shintoku	20714612
TOT_020001062	mRNA	TOT_020001062	NC_025261.1	963775	964197	R	TOT_020001062	complement(join(<963775..963834,963901..964024,964106..>964197))	Theileria orientalis strain Shintoku	20715153
TOT_020000469	mRNA	TOT_020000469	NC_025261.1	964462	969718	D	TOT_020000469	join(<964462..964644,964700..964820,964895..965625,965689..966482,966768..967464,967531..967636,967720..968187,968254..968372,968462..968629,968767..968907,969012..969147,969273..>969718)	Theileria orientalis strain Shintoku	20714613
TOT_020000470	mRNA	TOT_020000470	NC_025261.1	969973	970439	D	TOT_020000470	join(<969973..970215,970293..>970439)	Theileria orientalis strain Shintoku	20714614
TOT_020000471	mRNA	TOT_020000471	NC_025261.1	970546	972147	R	TOT_020000471	complement(join(<970546..970647,970795..>972147))	Theileria orientalis strain Shintoku	20714615
TOT_020000472	mRNA	TOT_020000472	NC_025261.1	972396	973660	D	TOT_020000472	join(<972396..972505,972608..972962,973035..973178,973388..>973660)	Theileria orientalis strain Shintoku	20714616
TOT_020000473	mRNA	TOT_020000473	NC_025261.1	973872	975725	R	TOT_020000473	complement(join(<973872..973998,974056..974208,974363..974619,974649..>975725))	Theileria orientalis strain Shintoku	20714617
TOT_020000474	mRNA	TOT_020000474	NC_025261.1	976243	977262	D	TOT_020000474	join(<976243..976247,976335..976634,976700..976761,976946..>977262)	Theileria orientalis strain Shintoku	20714618
TOT_020001008	mRNA	TOT_020001008	NC_025261.1	977570	978250	D	TOT_020001008	<977570..>978250	Theileria orientalis strain Shintoku	20715101
TOT_020000475	mRNA	TOT_020000475	NC_025261.1	978372	979786	D	TOT_020000475	join(<978372..978409,978484..978601,978750..978945,979129..979232,979338..979403,979534..979613,979678..>979786)	Theileria orientalis strain Shintoku	20714619
TOT_020000476	mRNA	TOT_020000476	NC_025261.1	979993	981147	D	TOT_020000476	join(<979993..980220,980251..>981147)	Theileria orientalis strain Shintoku	20714620
TOT_020000477	mRNA	TOT_020000477	NC_025261.1	981376	983977	D	TOT_020000477	join(<981376..981745,981756..982042,982106..982182,982293..982408,982593..983441,983622..>983977)	Theileria orientalis strain Shintoku	20714621
TOT_020000478	mRNA	TOT_020000478	NC_025261.1	984351	985289	D	TOT_020000478	<984351..>985289	Theileria orientalis strain Shintoku	20714622
TOT_020000479	mRNA	TOT_020000479	NC_025261.1	985619	986839	R	TOT_020000479	complement(<985619..>986839)	Theileria orientalis strain Shintoku	20714623
TOT_020000480	mRNA	TOT_020000480	NC_025261.1	987341	988624	D	TOT_020000480	join(<987341..987512,987543..>988624)	Theileria orientalis strain Shintoku	20714624
TOT_020000481	mRNA	TOT_020000481	NC_025261.1	988946	990452	R	TOT_020000481	complement(join(<988946..989092,989246..989594,989730..989797,989885..989972,990006..990064,990170..990238,990420..>990452))	Theileria orientalis strain Shintoku	20714625
TOT_020000482	mRNA	TOT_020000482	NC_025261.1	991222	991770	D	TOT_020000482	join(<991222..991356,991387..991649,991680..>991770)	Theileria orientalis strain Shintoku	20714626
TOT_020000483	mRNA	TOT_020000483	NC_025261.1	991943	992711	R	TOT_020000483	complement(join(<991943..992193,992324..>992711))	Theileria orientalis strain Shintoku	20714627
TOT_020000484	mRNA	TOT_020000484	NC_025261.1	994645	996612	D	TOT_020000484	<994645..>996612	Theileria orientalis strain Shintoku	20714628
TOT_020000485	mRNA	TOT_020000485	NC_025261.1	997001	999344	R	TOT_020000485	complement(join(<997001..998652,998726..999035,999126..>999344))	Theileria orientalis strain Shintoku	20714629
TOT_020000486	mRNA	TOT_020000486	NC_025261.1	999809	1002099	D	TOT_020000486	join(<999809..999887,999930..1000021,1000127..1000714,1000750..1001439,1001497..>1002099)	Theileria orientalis strain Shintoku	20714630
TOT_020000487	mRNA	TOT_020000487	NC_025261.1	1002262	1004517	R	TOT_020000487	complement(<1002262..>1004517)	Theileria orientalis strain Shintoku	20714631
TOT_020000488	mRNA	TOT_020000488	NC_025261.1	1004792	1005175	D	TOT_020000488	join(<1004792..1005042,1005094..>1005175)	Theileria orientalis strain Shintoku	20714632
TOT_020000489	mRNA	TOT_020000489	NC_025261.1	1005249	1007534	R	TOT_020000489	complement(join(<1005249..1006397,1006464..>1007534))	Theileria orientalis strain Shintoku	20714633
TOT_020000490	mRNA	TOT_020000490	NC_025261.1	1007812	1008717	D	TOT_020000490	join(<1007812..1007957,1008053..1008227,1008266..1008518,1008629..>1008717)	Theileria orientalis strain Shintoku	20714634
TOT_020001063	mRNA	TOT_020001063	NC_025261.1	1008803	1019140	D	TOT_020001063	join(<1008803..1009411,1009490..1010898,1011448..1011838,1011992..1012620,1012654..1012831,1012961..1013886,1014100..1014879,1015030..1016368,1016486..1016953,1017179..1018127,1018347..>1019140)	Theileria orientalis strain Shintoku	20715154
TOT_020000492	mRNA	TOT_020000492	NC_025261.1	1019458	1022754	R	TOT_020000492	complement(join(<1019458..1019553,1019743..1019990,1020231..>1022754))	Theileria orientalis strain Shintoku	20714635
TOT_020000493	mRNA	TOT_020000493	NC_025261.1	1023045	1024272	R	TOT_020000493	complement(join(<1023045..1023152,1023186..1023302,1023335..1023521,1023551..1023576,1023655..>1024272))	Theileria orientalis strain Shintoku	20714636
TOT_020000494	mRNA	TOT_020000494	NC_025261.1	1024752	1032428	R	TOT_020000494	complement(join(<1024752..1027437,1027810..>1032428))	Theileria orientalis strain Shintoku	20714637
TOT_020000495	mRNA	TOT_020000495	NC_025261.1	1033339	1035017	D	TOT_020000495	join(<1033339..1033422,1033535..1033811,1033866..1033930,1034160..>1035017)	Theileria orientalis strain Shintoku	20714638
TOT_020000496	mRNA	TOT_020000496	NC_025261.1	1035371	1038034	R	TOT_020000496	complement(<1035371..>1038034)	Theileria orientalis strain Shintoku	20714639
TOT_020000497	mRNA	TOT_020000497	NC_025261.1	1038458	1039498	R	TOT_020000497	complement(<1038458..>1039498)	Theileria orientalis strain Shintoku	20714640
TOT_020000498	mRNA	TOT_020000498	NC_025261.1	1040565	1042808	D	TOT_020000498	join(<1040565..1040693,1040784..1041062,1041177..1042340,1042481..1042596,1042682..>1042808)	Theileria orientalis strain Shintoku	20714641
TOT_020000499	mRNA	TOT_020000499	NC_025261.1	1043475	1047491	R	TOT_020000499	complement(join(<1043475..1044480,1044559..1046024,1046088..1047191,1047222..>1047491))	Theileria orientalis strain Shintoku	20714642
TOT_020000500	mRNA	TOT_020000500	NC_025261.1	1047892	1049036	R	TOT_020000500	complement(join(<1047892..1048038,1048144..1048841,1048925..>1049036))	Theileria orientalis strain Shintoku	20714643
TOT_020000501	mRNA	TOT_020000501	NC_025261.1	1049093	1049423	D	TOT_020000501	join(<1049093..1049147,1049323..>1049423)	Theileria orientalis strain Shintoku	20714644
TOT_020000502	mRNA	TOT_020000502	NC_025261.1	1049441	1049572	D	TOT_020000502	<1049441..>1049572	Theileria orientalis strain Shintoku	20714645
TOT_020000503	mRNA	TOT_020000503	NC_025261.1	1050658	1052151	D	TOT_020000503	<1050658..>1052151	Theileria orientalis strain Shintoku	20714646
TOT_020000504	mRNA	TOT_020000504	NC_025261.1	1052356	1052877	R	TOT_020000504	complement(<1052356..>1052877)	Theileria orientalis strain Shintoku	20714647
TOT_020000505	mRNA	TOT_020000505	NC_025261.1	1052899	1053045	D	TOT_020000505	join(<1052899..1052988,1053001..>1053045)	Theileria orientalis strain Shintoku	20714648
TOT_020000506	mRNA	TOT_020000506	NC_025261.1	1053108	1054512	R	TOT_020000506	complement(join(<1053108..1053327,1053405..1053522,1053682..1053844,1053912..1054007,1054041..1054152,1054232..1054284,1054366..>1054512))	Theileria orientalis strain Shintoku	20714649
TOT_020000507	mRNA	TOT_020000507	NC_025261.1	1054883	1058770	R	TOT_020000507	complement(join(<1054883..1055018,1055059..1055243,1055510..1055855,1055886..1055963,1056013..1056066,1056126..1056433,1056550..1056992,1057113..1058585,1058722..>1058770))	Theileria orientalis strain Shintoku	20714650
TOT_020000508	mRNA	TOT_020000508	NC_025261.1	1058953	1062912	R	TOT_020000508	complement(join(<1058953..1059128,1059175..1059232,1059266..1059325,1059370..1059497,1059529..1060122,1060246..1062216,1062333..>1062912))	Theileria orientalis strain Shintoku	20714651
TOT_020000509	mRNA	TOT_020000509	NC_025261.1	1063019	1063594	R	TOT_020000509	complement(join(<1063019..1063250,1063281..>1063594))	Theileria orientalis strain Shintoku	20714652
TOT_020000510	mRNA	TOT_020000510	NC_025261.1	1063848	1065016	R	TOT_020000510	complement(join(<1063848..1063905,1064009..1064067,1064100..1064168,1064204..1064317,1064350..1064462,1064499..1064572,1064604..1064736,1064790..1064815,1064928..>1065016))	Theileria orientalis strain Shintoku	20714653
TOT_020000511	mRNA	TOT_020000511	NC_025261.1	1065114	1069690	D	TOT_020000511	join(<1065114..1065193,1065273..1065672,1065745..1066086,1066129..1066270,1066303..1066647,1066774..1069634,1069649..>1069690)	Theileria orientalis strain Shintoku	20714654
TOT_020000512	mRNA	TOT_020000512	NC_025261.1	1069974	1074173	R	TOT_020000512	complement(join(<1069974..1071384,1071460..1072663,1072961..>1074173))	Theileria orientalis strain Shintoku	20714655
TOT_020000513	mRNA	TOT_020000513	NC_025261.1	1074823	1077118	D	TOT_020000513	join(<1074823..1075069,1075110..1075927,1075991..1076443,1076550..1076632,1076675..1076836,1076989..>1077118)	Theileria orientalis strain Shintoku	20714656
TOT_020000514	mRNA	TOT_020000514	NC_025261.1	1077207	1077845	R	TOT_020000514	complement(join(<1077207..1077322,1077357..1077453,1077502..1077560,1077689..>1077845))	Theileria orientalis strain Shintoku	20714657
TOT_020000515	mRNA	TOT_020000515	NC_025261.1	1078165	1079359	D	TOT_020000515	join(<1078165..1078332,1078392..1078517,1078600..1078730,1078764..1078857,1078930..1079151,1079291..>1079359)	Theileria orientalis strain Shintoku	20714658
TOT_020000516	mRNA	TOT_020000516	NC_025261.1	1079535	1080170	D	TOT_020000516	join(<1079535..1079662,1079780..1079836,1079871..1079955,1079988..>1080170)	Theileria orientalis strain Shintoku	20714659
TOT_020001009	mRNA	TOT_020001009	NC_025261.1	1080368	1083398	R	TOT_020001009	complement(join(<1080368..1083189,1083320..1083353,1083396..>1083398))	Theileria orientalis strain Shintoku	20715102
TOT_020000517	mRNA	TOT_020000517	NC_025261.1	1083588	1084504	R	TOT_020000517	complement(join(<1083588..1083616,1083646..1083719,1083759..1083876,1083911..1084350,1084443..>1084504))	Theileria orientalis strain Shintoku	20714660
TOT_020001064	mRNA	TOT_020001064	NC_025261.1	1084648	1085598	R	TOT_020001064	complement(<1084648..>1085598)	Theileria orientalis strain Shintoku	20715155
TOT_020000519	mRNA	TOT_020000519	NC_025261.1	1085708	1085896	D	TOT_020000519	<1085708..>1085896	Theileria orientalis strain Shintoku	20714661
TOT_020001065	mRNA	TOT_020001065	NC_025261.1	1086451	1086657	R	TOT_020001065	complement(<1086451..>1086657)	Theileria orientalis strain Shintoku	20715156
TOT_020000521	mRNA	TOT_020000521	NC_025261.1	1087292	1088203	D	TOT_020000521	<1087292..>1088203	Theileria orientalis strain Shintoku	20714662
TOT_020000522	mRNA	TOT_020000522	NC_025261.1	1088518	1090070	D	TOT_020000522	join(<1088518..1089523,1089612..1089739,1089834..>1090070)	Theileria orientalis strain Shintoku	20714663
TOT_020000523	mRNA	TOT_020000523	NC_025261.1	1090395	1095813	R	TOT_020000523	complement(join(<1090395..1090940,1091028..1092208,1092357..1093063,1093274..1094294,1094397..1094737,1094870..1095567,1095712..>1095813))	Theileria orientalis strain Shintoku	20714664
TOT_020000524	mRNA	TOT_020000524	NC_025261.1	1096261	1096998	D	TOT_020000524	join(<1096261..1096334,1096369..1096451,1096496..1096637,1096669..1096750,1096834..>1096998)	Theileria orientalis strain Shintoku	20714665
TOT_020000525	mRNA	TOT_020000525	NC_025261.1	1097021	1097657	R	TOT_020000525	complement(join(<1097021..1097345,1097383..>1097657))	Theileria orientalis strain Shintoku	20714666
TOT_020000526	mRNA	TOT_020000526	NC_025261.1	1098123	1099176	D	TOT_020000526	join(<1098123..1098980,1099102..>1099176)	Theileria orientalis strain Shintoku	20714667
TOT_020001066	mRNA	TOT_020001066	NC_025261.1	1099267	1103440	D	TOT_020001066	join(<1099267..1100689,1100876..1102076,1102347..1103312,1103344..>1103440)	Theileria orientalis strain Shintoku	20715157
TOT_020000528	mRNA	TOT_020000528	NC_025261.1	1103340	1105295	R	TOT_020000528	complement(join(<1103340..1103436,1103492..1103557,1103574..1103879,1103952..1105165,1105206..>1105295))	Theileria orientalis strain Shintoku	20714668
TOT_020000529	mRNA	TOT_020000529	NC_025261.1	1105635	1106303	D	TOT_020000529	<1105635..>1106303	Theileria orientalis strain Shintoku	20714669
TOT_020000530	mRNA	TOT_020000530	NC_025261.1	1106452	1107730	D	TOT_020000530	join(<1106452..1106699,1106732..1106932,1106964..1107341,1107403..>1107730)	Theileria orientalis strain Shintoku	20714670
TOT_020000531	mRNA	TOT_020000531	NC_025261.1	1107942	1108727	R	TOT_020000531	complement(join(<1107942..1108369,1108400..1108545,1108582..>1108727))	Theileria orientalis strain Shintoku	20714671
TOT_020000532	mRNA	TOT_020000532	NC_025261.1	1109110	1110600	D	TOT_020000532	join(<1109110..1110268,1110440..>1110600)	Theileria orientalis strain Shintoku	20714672
TOT_020000533	mRNA	TOT_020000533	NC_025261.1	1110817	1112553	D	TOT_020000533	join(<1110817..1110925,1110990..1111084,1111119..1111411,1111478..1111599,1111629..1111714,1111750..1112243,1112325..>1112553)	Theileria orientalis strain Shintoku	20714673
TOT_020000534	mRNA	TOT_020000534	NC_025261.1	1112657	1113361	R	TOT_020000534	complement(<1112657..>1113361)	Theileria orientalis strain Shintoku	20714674
TOT_020000535	mRNA	TOT_020000535	NC_025261.1	1113383	1115019	D	TOT_020000535	join(<1113383..1113470,1113481..1113539,1113572..1113732,1113864..>1115019)	Theileria orientalis strain Shintoku	20714675
TOT_020000536	mRNA	TOT_020000536	NC_025261.1	1115119	1115427	R	TOT_020000536	complement(<1115119..>1115427)	Theileria orientalis strain Shintoku	20714676
TOT_020000537	mRNA	TOT_020000537	NC_025261.1	1115462	1115587	D	TOT_020000537	<1115462..>1115587	Theileria orientalis strain Shintoku	20714677
TOT_020000538	mRNA	TOT_020000538	NC_025261.1	1115636	1116262	D	TOT_020000538	join(<1115636..1115685,1116169..>1116262)	Theileria orientalis strain Shintoku	20714678
TOT_020000539	mRNA	TOT_020000539	NC_025261.1	1116509	1117180	R	TOT_020000539	complement(<1116509..>1117180)	Theileria orientalis strain Shintoku	20714679
TOT_020000540	mRNA	TOT_020000540	NC_025261.1	1117377	1118039	R	TOT_020000540	complement(<1117377..>1118039)	Theileria orientalis strain Shintoku	20714680
TOT_020000541	mRNA	TOT_020000541	NC_025261.1	1118398	1119564	R	TOT_020000541	complement(join(<1118398..1118556,1118610..1119179,1119312..1119379,1119477..>1119564))	Theileria orientalis strain Shintoku	20714681
TOT_020000542	mRNA	TOT_020000542	NC_025261.1	1119586	1120323	R	TOT_020000542	complement(join(<1119586..1119613,1119680..>1120323))	Theileria orientalis strain Shintoku	20714682
TOT_020000543	mRNA	TOT_020000543	NC_025261.1	1120846	1121604	R	TOT_020000543	complement(join(<1120846..1120996,1121027..1121127,1121168..1121524,1121560..>1121604))	Theileria orientalis strain Shintoku	20714683
TOT_020000544	mRNA	TOT_020000544	NC_025261.1	1121726	1123994	R	TOT_020000544	complement(join(<1121726..1121866,1122009..>1123994))	Theileria orientalis strain Shintoku	20714684
TOT_020000545	mRNA	TOT_020000545	NC_025261.1	1124749	1124787	R	TOT_020000545	complement(<1124749..>1124787)	Theileria orientalis strain Shintoku	20714685
TOT_020000546	mRNA	TOT_020000546	NC_025261.1	1125082	1125789	D	TOT_020000546	join(<1125082..1125129,1125161..1125368,1125436..1125546,1125578..>1125789)	Theileria orientalis strain Shintoku	20714686
TOT_020000547	mRNA	TOT_020000547	NC_025261.1	1126002	1126739	R	TOT_020000547	complement(<1126002..>1126739)	Theileria orientalis strain Shintoku	20714687
TOT_020000548	mRNA	TOT_020000548	NC_025261.1	1126968	1127948	D	TOT_020000548	join(<1126968..1127643,1127755..>1127948)	Theileria orientalis strain Shintoku	20714688
TOT_020000549	mRNA	TOT_020000549	NC_025261.1	1128275	1130246	R	TOT_020000549	complement(join(<1128275..1128445,1128608..1128886,1128968..1129146,1129392..1129930,1129969..>1130246))	Theileria orientalis strain Shintoku	20714689
TOT_020001067	mRNA	TOT_020001067	NC_025261.1	1130851	1131386	D	TOT_020001067	join(<1130851..1130925,1130967..>1131386)	Theileria orientalis strain Shintoku	20715158
TOT_020001068	mRNA	TOT_020001068	NC_025261.1	1131542	1133572	D	TOT_020001068	join(<1131542..1131818,1131853..1131932,1131963..1132054,1132152..1132342,1132534..1132672,1132705..1133030,1133130..>1133572)	Theileria orientalis strain Shintoku	20715159
TOT_020000551	mRNA	TOT_020000551	NC_025261.1	1133910	1134791	R	TOT_020000551	complement(<1133910..>1134791)	Theileria orientalis strain Shintoku	20714690
TOT_020000552	mRNA	TOT_020000552	NC_025261.1	1135422	1136225	D	TOT_020000552	<1135422..>1136225	Theileria orientalis strain Shintoku	20714691
TOT_020000553	mRNA	TOT_020000553	NC_025261.1	1136442	1137215	D	TOT_020000553	join(<1136442..1136658,1136740..>1137215)	Theileria orientalis strain Shintoku	20714692
TOT_020000554	mRNA	TOT_020000554	NC_025261.1	1137452	1139899	D	TOT_020000554	join(<1137452..1138744,1138852..1139112,1139209..1139371,1139441..1139586,1139687..>1139899)	Theileria orientalis strain Shintoku	20714693
TOT_020000555	mRNA	TOT_020000555	NC_025261.1	1140199	1142024	R	TOT_020000555	complement(join(<1140199..1141807,1142014..>1142024))	Theileria orientalis strain Shintoku	20714694
TOT_020000556	mRNA	TOT_020000556	NC_025261.1	1142346	1144241	D	TOT_020000556	join(<1142346..1142513,1142544..1142757,1142789..1142940,1143053..1143280,1143381..>1144241)	Theileria orientalis strain Shintoku	20714695
TOT_020000557	mRNA	TOT_020000557	NC_025261.1	1144548	1145219	R	TOT_020000557	complement(<1144548..>1145219)	Theileria orientalis strain Shintoku	20714696
TOT_020000558	mRNA	TOT_020000558	NC_025261.1	1145596	1147451	R	TOT_020000558	complement(join(<1145596..1145876,1145938..1146103,1146171..1146179,1146219..1146277,1146348..1146498,1146574..1146664,1146696..1147019,1147105..>1147451))	Theileria orientalis strain Shintoku	20714697
TOT_020000559	mRNA	TOT_020000559	NC_025261.1	1147583	1147964	R	TOT_020000559	complement(join(<1147583..1147671,1147718..1147824,1147858..>1147964))	Theileria orientalis strain Shintoku	20714698
TOT_020001069	mRNA	TOT_020001069	NC_025261.1	1148260	1149336	R	TOT_020001069	complement(<1148260..>1149336)	Theileria orientalis strain Shintoku	20715160
TOT_020000561	mRNA	TOT_020000561	NC_025261.1	1149544	1149651	R	TOT_020000561	complement(<1149544..>1149651)	Theileria orientalis strain Shintoku	20714699
TOT_020000562	mRNA	TOT_020000562	NC_025261.1	1149931	1153209	R	TOT_020000562	complement(join(<1149931..1150544,1150725..1151313,1151368..1151449,1151582..1152033,1152106..1152247,1152290..1152607,1152686..1152922,1152998..>1153209))	Theileria orientalis strain Shintoku	20714700
TOT_020000563	mRNA	TOT_020000563	NC_025261.1	1153898	1155134	R	TOT_020000563	complement(join(<1153898..1154289,1154351..1154435,1154471..1154545,1154576..1154637,1154673..1154816,1154900..1154947,1155059..>1155134))	Theileria orientalis strain Shintoku	20714701
TOT_020000564	mRNA	TOT_020000564	NC_025261.1	1155136	1155450	R	TOT_020000564	complement(<1155136..>1155450)	Theileria orientalis strain Shintoku	20714702
TOT_020000565	mRNA	TOT_020000565	NC_025261.1	1155592	1156147	D	TOT_020000565	join(<1155592..1155887,1155928..>1156147)	Theileria orientalis strain Shintoku	20714703
TOT_020000566	mRNA	TOT_020000566	NC_025261.1	1156265	1156876	R	TOT_020000566	complement(<1156265..>1156876)	Theileria orientalis strain Shintoku	20714704
TOT_020000567	mRNA	TOT_020000567	NC_025261.1	1157375	1162176	D	TOT_020000567	join(<1157375..1157402,1157549..1157785,1157942..1158684,1158778..>1162176)	Theileria orientalis strain Shintoku	20714705
TOT_020000568	mRNA	TOT_020000568	NC_025261.1	1162989	1168343	D	TOT_020000568	join(<1162989..1164375,1164715..1164883,1164989..1166135,1166172..1166776,1167071..1167141,1167529..>1168343)	Theileria orientalis strain Shintoku	20714706
TOT_020000569	mRNA	TOT_020000569	NC_025261.1	1168481	1168600	R	TOT_020000569	complement(<1168481..>1168600)	Theileria orientalis strain Shintoku	20714707
TOT_020000570	mRNA	TOT_020000570	NC_025261.1	1168697	1170382	R	TOT_020000570	complement(join(<1168697..1169766,1169941..>1170382))	Theileria orientalis strain Shintoku	20714708
TOT_020000571	mRNA	TOT_020000571	NC_025261.1	1170545	1173604	D	TOT_020000571	join(<1170545..1170861,1170893..1170956,1170987..1171718,1171827..1172060,1172090..1172260,1172293..1172417,1172441..1172535,1172727..1173226,1173377..>1173604)	Theileria orientalis strain Shintoku	20714709
TOT_020000572	mRNA	TOT_020000572	NC_025261.1	1173830	1175549	R	TOT_020000572	complement(join(<1173830..1174846,1175061..>1175549))	Theileria orientalis strain Shintoku	20714710
TOT_020000573	mRNA	TOT_020000573	NC_025261.1	1175657	1178546	R	TOT_020000573	complement(join(<1175657..1176096,1176230..1177123,1177226..1178001,1178083..>1178546))	Theileria orientalis strain Shintoku	20714711
TOT_020000574	mRNA	TOT_020000574	NC_025261.1	1178890	1179966	D	TOT_020000574	join(<1178890..1178997,1179175..1179387,1179454..1179780,1179901..>1179966)	Theileria orientalis strain Shintoku	20714712
TOT_020000575	mRNA	TOT_020000575	NC_025261.1	1180026	1180963	D	TOT_020000575	join(<1180026..1180125,1180227..1180339,1180391..1180460,1180609..1180730,1180820..>1180963)	Theileria orientalis strain Shintoku	20714713
TOT_020000576	mRNA	TOT_020000576	NC_025261.1	1181054	1181863	R	TOT_020000576	complement(<1181054..>1181863)	Theileria orientalis strain Shintoku	20714714
TOT_020000577	mRNA	TOT_020000577	NC_025261.1	1182024	1182502	D	TOT_020000577	join(<1182024..1182153,1182192..>1182502)	Theileria orientalis strain Shintoku	20714715
TOT_020000578	mRNA	TOT_020000578	NC_025261.1	1182761	1187335	R	TOT_020000578	complement(join(<1182761..1183003,1183035..1183108,1183307..1183472,1183538..1183849,1183954..1184069,1184156..1184463,1184577..1185107,1185210..>1187335))	Theileria orientalis strain Shintoku	20714716
TOT_020000579	mRNA	TOT_020000579	NC_025261.1	1187717	1189057	R	TOT_020000579	complement(<1187717..>1189057)	Theileria orientalis strain Shintoku	20714717
TOT_020000580	mRNA	TOT_020000580	NC_025261.1	1189433	1192672	R	TOT_020000580	complement(<1189433..>1192672)	Theileria orientalis strain Shintoku	20714718
TOT_020000581	mRNA	TOT_020000581	NC_025261.1	1193186	1196539	R	TOT_020000581	complement(<1193186..>1196539)	Theileria orientalis strain Shintoku	20714719
TOT_020000582	mRNA	TOT_020000582	NC_025261.1	1197301	1198104	D	TOT_020000582	<1197301..>1198104	Theileria orientalis strain Shintoku	20714720
TOT_020000583	mRNA	TOT_020000583	NC_025261.1	1198185	1202948	R	TOT_020000583	complement(join(<1198185..1198502,1198798..1199362,1200028..1200104,1200265..1200399,1200597..1200689,1200877..1201005,1201135..1201666,1201871..1202122,1202185..1202306,1202338..1202448,1202478..>1202948))	Theileria orientalis strain Shintoku	20714721
TOT_020000584	mRNA	TOT_020000584	NC_025261.1	1203095	1205346	D	TOT_020000584	join(<1203095..1203100,1203229..1203456,1203537..1204098,1204184..1204359,1204525..1204711,1204790..1204867,1204936..1205016,1205252..>1205346)	Theileria orientalis strain Shintoku	20714722
TOT_020000585	mRNA	TOT_020000585	NC_025261.1	1205544	1205992	R	TOT_020000585	complement(join(<1205544..1205635,1205815..>1205992))	Theileria orientalis strain Shintoku	20714723
TOT_020000586	mRNA	TOT_020000586	NC_025261.1	1206159	1208259	R	TOT_020000586	complement(join(<1206159..1206212,1206334..1206402,1206440..1206531,1206718..1206808,1206849..1207242,1207331..1207428,1207500..1207651,1207740..1207805,1207901..1207990,1208040..>1208259))	Theileria orientalis strain Shintoku	20714724
TOT_020000587	mRNA	TOT_020000587	NC_025261.1	1208520	1210289	R	TOT_020000587	complement(join(<1208520..1208627,1208694..1210177,1210220..>1210289))	Theileria orientalis strain Shintoku	20714725
TOT_020000588	mRNA	TOT_020000588	NC_025261.1	1210640	1211554	R	TOT_020000588	complement(join(<1210640..1211082,1211212..>1211554))	Theileria orientalis strain Shintoku	20714726
TOT_020000589	mRNA	TOT_020000589	NC_025261.1	1212177	1212376	R	TOT_020000589	complement(join(<1212177..1212350,1212362..>1212376))	Theileria orientalis strain Shintoku	20714727
TOT_020000590	mRNA	TOT_020000590	NC_025261.1	1212448	1214957	D	TOT_020000590	join(<1212448..1212744,1212835..1213593,1213672..1213820,1213985..1214439,1214521..1214589,1214818..>1214957)	Theileria orientalis strain Shintoku	20714728
TOT_020001070	mRNA	TOT_020001070	NC_025261.1	1215374	1216373	D	TOT_020001070	join(<1215374..1215524,1215786..1216037,1216120..>1216373)	Theileria orientalis strain Shintoku	20715161
TOT_020000592	mRNA	TOT_020000592	NC_025261.1	1216750	1224828	R	TOT_020000592	complement(<1216750..>1224828)	Theileria orientalis strain Shintoku	20714729
TOT_020000593	mRNA	TOT_020000593	NC_025261.1	1225141	1228005	R	TOT_020000593	complement(join(<1225141..1225541,1225613..1226201,1226480..1226748,1226874..>1228005))	Theileria orientalis strain Shintoku	20714730
TOT_020000594	mRNA	TOT_020000594	NC_025261.1	1228030	1229203	D	TOT_020000594	join(<1228030..1228494,1228543..1228656,1228752..1228807,1228879..1229023,1229096..>1229203)	Theileria orientalis strain Shintoku	20714731
TOT_020000595	mRNA	TOT_020000595	NC_025261.1	1229861	1231942	D	TOT_020000595	join(<1229861..1231292,1231440..1231558,1231787..>1231942)	Theileria orientalis strain Shintoku	20714732
TOT_020000596	mRNA	TOT_020000596	NC_025261.1	1232323	1233305	D	TOT_020000596	join(<1232323..1232355,1232787..1232958,1233055..1233209,1233228..>1233305)	Theileria orientalis strain Shintoku	20714733
TOT_020000597	mRNA	TOT_020000597	NC_025261.1	1233768	1234217	R	TOT_020000597	complement(<1233768..>1234217)	Theileria orientalis strain Shintoku	20714734
TOT_020000598	mRNA	TOT_020000598	NC_025261.1	1234688	1236260	D	TOT_020000598	join(<1234688..1234763,1235083..1235165,1235295..1235516,1235589..1235758,1236023..>1236260)	Theileria orientalis strain Shintoku	20714735
TOT_020000599	mRNA	TOT_020000599	NC_025261.1	1237045	1237614	R	TOT_020000599	complement(<1237045..>1237614)	Theileria orientalis strain Shintoku	20714736
TOT_020000600	mRNA	TOT_020000600	NC_025261.1	1238224	1240012	R	TOT_020000600	complement(join(<1238224..1238361,1238455..1238644,1238716..1238868,1238962..1239015,1239078..1239154,1239389..1239508,1239722..>1240012))	Theileria orientalis strain Shintoku	20714737
TOT_020000601	mRNA	TOT_020000601	NC_025261.1	1240742	1241842	R	TOT_020000601	complement(join(<1240742..1241121,1241764..>1241842))	Theileria orientalis strain Shintoku	20714738
TOT_020000602	mRNA	TOT_020000602	NC_025261.1	1242607	1243882	R	TOT_020000602	complement(join(<1242607..1242690,1242921..1242973,1243078..1243259,1243770..>1243882))	Theileria orientalis strain Shintoku	20714739
TOT_020000603	mRNA	TOT_020000603	NC_025261.1	1244191	1246028	R	TOT_020000603	complement(join(<1244191..1244260,1244450..1245356,1245461..1245629,1245927..>1246028))	Theileria orientalis strain Shintoku	20714740
TOT_020000604	mRNA	TOT_020000604	NC_025261.1	1246453	1246756	R	TOT_020000604	complement(join(<1246453..1246673,1246708..>1246756))	Theileria orientalis strain Shintoku	20714741
TOT_020000605	mRNA	TOT_020000605	NC_025261.1	1247815	1249770	D	TOT_020000605	join(<1247815..1247944,1248140..1248462,1248804..1248890,1248922..>1249770)	Theileria orientalis strain Shintoku	20714742
TOT_020000606	mRNA	TOT_020000606	NC_025261.1	1249949	1253869	D	TOT_020000606	join(<1249949..1250723,1250778..1250969,1251192..1252260,1253113..>1253869)	Theileria orientalis strain Shintoku	20714743
TOT_020000607	mRNA	TOT_020000607	NC_025261.1	1253957	1255072	R	TOT_020000607	complement(join(<1253957..1254192,1254218..1254575,1254666..1254908,1255064..>1255072))	Theileria orientalis strain Shintoku	20714744
TOT_020000608	mRNA	TOT_020000608	NC_025261.1	1255181	1259973	R	TOT_020000608	complement(join(<1255181..1255546,1255636..1258901,1258993..1259046,1259077..1259265,1259364..1259621,1259823..>1259973))	Theileria orientalis strain Shintoku	20714745
TOT_020000609	mRNA	TOT_020000609	NC_025261.1	1260499	1260975	D	TOT_020000609	join(<1260499..1260602,1260683..1260781,1260930..>1260975)	Theileria orientalis strain Shintoku	20714746
TOT_020000610	mRNA	TOT_020000610	NC_025261.1	1261173	1261698	D	TOT_020000610	join(<1261173..1261283,1261417..>1261698)	Theileria orientalis strain Shintoku	20714747
TOT_020001071	mRNA	TOT_020001071	NC_025261.1	1261893	1263379	R	TOT_020001071	complement(join(<1261893..1262120,1262193..1262274,1262363..1262445,1262634..1262905,1262996..1263137,1263219..1263341,1263371..>1263379))	Theileria orientalis strain Shintoku	20715162
TOT_020001011	mRNA	TOT_020001011	NC_025261.1	1263966	1264680	R	TOT_020001011	complement(join(<1263966..1264142,1264345..>1264680))	Theileria orientalis strain Shintoku	20715103
TOT_020001012	mRNA	TOT_020001012	NC_025261.1	1265037	1267049	R	TOT_020001012	complement(join(<1265037..1265174,1265330..1265439,1265554..1265655,1265782..1265913,1265980..1266094,1266127..1266359,1266479..>1267049))	Theileria orientalis strain Shintoku	20715104
TOT_020000613	mRNA	TOT_020000613	NC_025261.1	1267332	1274009	D	TOT_020000613	join(<1267332..1268494,1268615..1269453,1269637..1269723,1269769..1271337,1271596..1272813,1272895..1273227,1273444..>1274009)	Theileria orientalis strain Shintoku	20714748
TOT_020000614	mRNA	TOT_020000614	NC_025261.1	1274136	1276335	R	TOT_020000614	complement(join(<1274136..1274300,1274323..>1276335))	Theileria orientalis strain Shintoku	20714749
TOT_020000615	mRNA	TOT_020000615	NC_025261.1	1276629	1277995	D	TOT_020000615	join(<1276629..1276929,1277004..1277126,1277157..1277234,1277327..1277428,1277549..1277814,1277918..>1277995)	Theileria orientalis strain Shintoku	20714750
TOT_020001072	mRNA	TOT_020001072	NC_025261.1	1278038	1279956	D	TOT_020001072	join(<1278038..1278130,1278210..1278310,1278476..1278578,1278679..1279041,1279228..1279332,1279531..>1279956)	Theileria orientalis strain Shintoku	20715163
TOT_020000617	mRNA	TOT_020000617	NC_025261.1	1280475	1281631	D	TOT_020000617	join(<1280475..1280597,1280628..1280671,1280722..1280836,1280898..1281031,1281101..1281157,1281254..1281330,1281363..1281422,1281525..>1281631)	Theileria orientalis strain Shintoku	20714751
TOT_020000618	mRNA	TOT_020000618	NC_025261.1	1281896	1282706	R	TOT_020000618	complement(join(<1281896..1282414,1282554..>1282706))	Theileria orientalis strain Shintoku	20714752
TOT_020000619	mRNA	TOT_020000619	NC_025261.1	1283203	1286568	D	TOT_020000619	join(<1283203..1283643,1283733..1283913,1284037..1284495,1284562..1284680,1284830..1285243,1285322..1285552,1285642..1285761,1285859..1286142,1286244..>1286568)	Theileria orientalis strain Shintoku	20714753
TOT_020001073	mRNA	TOT_020001073	NC_025261.1	1287164	1288014	D	TOT_020001073	join(<1287164..1287181,1287294..1287525,1287648..1287748,1287931..>1288014)	Theileria orientalis strain Shintoku	20715164
TOT_020000621	mRNA	TOT_020000621	NC_025261.1	1288307	1290460	R	TOT_020000621	complement(join(<1288307..1289308,1289445..1289773,1289870..1289946,1290022..1290172,1290239..1290336,1290444..>1290460))	Theileria orientalis strain Shintoku	20714754
TOT_020000622	mRNA	TOT_020000622	NC_025261.1	1290660	1292494	D	TOT_020000622	join(<1290660..1290788,1290878..1290955,1291016..1291064,1291097..1291248,1291280..1291394,1291580..1291706,1291739..1291979,1292141..1292252,1292406..>1292494)	Theileria orientalis strain Shintoku	20714755
TOT_020001074	mRNA	TOT_020001074	NC_025261.1	1292573	1293318	D	TOT_020001074	join(<1292573..1292701,1292875..1293067,1293149..>1293318)	Theileria orientalis strain Shintoku	20715165
TOT_020000624	mRNA	TOT_020000624	NC_025261.1	1293562	1295069	D	TOT_020000624	join(<1293562..1293589,1293809..1294005,1294218..1294405,1294436..1294614,1294759..>1295069)	Theileria orientalis strain Shintoku	20714756
TOT_020000625	mRNA	TOT_020000625	NC_025261.1	1295226	1297118	R	TOT_020000625	complement(join(<1295226..1295330,1295472..1295594,1295840..1295968,1296063..1296563,1296597..1296758,1296814..1296995,1297037..>1297118))	Theileria orientalis strain Shintoku	20714757
TOT_020000626	mRNA	TOT_020000626	NC_025261.1	1297568	1298722	D	TOT_020000626	join(<1297568..1297591,1297690..1297908,1297940..>1298722)	Theileria orientalis strain Shintoku	20714758
TOT_020001075	mRNA	TOT_020001075	NC_025261.1	1299277	1300846	D	TOT_020001075	join(<1299277..1299832,1300070..1300257,1300342..1300596,1300724..>1300846)	Theileria orientalis strain Shintoku	20715166
TOT_020001076	mRNA	TOT_020001076	NC_025261.1	1301302	1302268	D	TOT_020001076	join(<1301302..1301910,1301937..1302001,1302031..>1302268)	Theileria orientalis strain Shintoku	20715167
TOT_020000628	mRNA	TOT_020000628	NC_025261.1	1302304	1303836	D	TOT_020000628	join(<1302304..1302435,1302670..1302803,1302927..1303162,1303285..1303502,1303566..1303619,1303711..>1303836)	Theileria orientalis strain Shintoku	20714759
TOT_020000629	mRNA	TOT_020000629	NC_025261.1	1304073	1309533	D	TOT_020000629	join(<1304073..1304248,1304312..1304445,1304492..1304640,1304725..1304830,1304943..1305001,1305083..1305161,1305235..1305302,1305374..1305601,1305659..1306339,1306544..1306768,1306919..1307210,1307388..1307833,1307901..1308078,1308254..1308321,1308676..1308833,1308956..1309090,1309374..>1309533)	Theileria orientalis strain Shintoku	20714760
TOT_020000630	mRNA	TOT_020000630	NC_025261.1	1309808	1310443	R	TOT_020000630	complement(<1309808..>1310443)	Theileria orientalis strain Shintoku	20714761
TOT_020000631	mRNA	TOT_020000631	NC_025261.1	1310529	1312055	R	TOT_020000631	complement(join(<1310529..1311607,1311637..1311730,1311840..>1312055))	Theileria orientalis strain Shintoku	20714762
TOT_020000632	mRNA	TOT_020000632	NC_025261.1	1312252	1313442	R	TOT_020000632	complement(join(<1312252..1312583,1312632..1312705,1312736..1312866,1312924..1313127,1313410..>1313442))	Theileria orientalis strain Shintoku	20714763
TOT_020000633	mRNA	TOT_020000633	NC_025261.1	1313572	1314453	D	TOT_020000633	join(<1313572..1313782,1313873..>1314453)	Theileria orientalis strain Shintoku	20714764
TOT_020000634	mRNA	TOT_020000634	NC_025261.1	1314764	1315972	D	TOT_020000634	join(<1314764..1315821,1315867..>1315972)	Theileria orientalis strain Shintoku	20714765
TOT_020000635	mRNA	TOT_020000635	NC_025261.1	1316426	1317630	D	TOT_020000635	join(<1316426..1317477,1317525..>1317630)	Theileria orientalis strain Shintoku	20714766
TOT_020000636	mRNA	TOT_020000636	NC_025261.1	1317758	1319395	R	TOT_020000636	complement(join(<1317758..1318887,1319056..>1319395))	Theileria orientalis strain Shintoku	20714767
TOT_020001077	mRNA	TOT_020001077	NC_025261.1	1319699	1319989	R	TOT_020001077	complement(<1319699..>1319989)	Theileria orientalis strain Shintoku	20715168
TOT_020000638	mRNA	TOT_020000638	NC_025261.1	1320052	1320544	D	TOT_020000638	join(<1320052..1320164,1320379..>1320544)	Theileria orientalis strain Shintoku	20714768
TOT_020000639	mRNA	TOT_020000639	NC_025261.1	1321049	1322254	D	TOT_020000639	join(<1321049..1322103,1322149..>1322254)	Theileria orientalis strain Shintoku	20714769
TOT_020000640	mRNA	TOT_020000640	NC_025261.1	1322708	1323916	D	TOT_020000640	join(<1322708..1323762,1323796..>1323916)	Theileria orientalis strain Shintoku	20714770
TOT_020000641	mRNA	TOT_020000641	NC_025261.1	1323870	1323962	R	TOT_020000641	complement(<1323870..>1323962)	Theileria orientalis strain Shintoku	20714771
TOT_020000642	mRNA	TOT_020000642	NC_025261.1	1324504	1325653	D	TOT_020000642	join(<1324504..1325480,1325530..>1325653)	Theileria orientalis strain Shintoku	20714772
TOT_020000643	mRNA	TOT_020000643	NC_025261.1	1326168	1327154	D	TOT_020000643	<1326168..>1327154	Theileria orientalis strain Shintoku	20714773
TOT_020000644	mRNA	TOT_020000644	NC_025261.1	1328270	1332931	D	TOT_020000644	<1328270..>1332931	Theileria orientalis strain Shintoku	20714774
TOT_020000645	mRNA	TOT_020000645	NC_025261.1	1333298	1335650	R	TOT_020000645	complement(join(<1333298..1333370,1333614..1333695,1333743..1333842,1334136..1334294,1334426..1334503,1334538..1334689,1334804..1334895,1334989..1335066,1335098..1335210,1335243..1335354,1335386..1335547,1335589..>1335650))	Theileria orientalis strain Shintoku	20714775
TOT_020000646	mRNA	TOT_020000646	NC_025261.1	1335863	1340278	D	TOT_020000646	join(<1335863..1336052,1336103..1336378,1336499..1336568,1336609..1337065,1337215..1337320,1337510..1337779,1338013..1338136,1338180..1338384,1338537..1338740,1338938..1339081,1339220..1339896,1340005..>1340278)	Theileria orientalis strain Shintoku	20714776
TOT_020000647	mRNA	TOT_020000647	NC_025261.1	1340439	1341011	R	TOT_020000647	complement(<1340439..>1341011)	Theileria orientalis strain Shintoku	20714777
TOT_020000648	mRNA	TOT_020000648	NC_025261.1	1341632	1342953	R	TOT_020000648	complement(join(<1341632..1342091,1342125..1342183,1342306..1342460,1342595..1342820,1342852..>1342953))	Theileria orientalis strain Shintoku	20714778
TOT_020000649	mRNA	TOT_020000649	NC_025261.1	1343183	1347054	R	TOT_020000649	complement(join(<1343183..1344705,1344820..1345431,1345626..>1347054))	Theileria orientalis strain Shintoku	20714779
TOT_020000650	mRNA	TOT_020000650	NC_025261.1	1347417	1348195	D	TOT_020000650	join(<1347417..1347533,1347581..1347709,1347928..1348053,1348088..>1348195)	Theileria orientalis strain Shintoku	20714780
TOT_020000651	mRNA	TOT_020000651	NC_025261.1	1348220	1348969	D	TOT_020000651	join(<1348220..1348667,1348755..>1348969)	Theileria orientalis strain Shintoku	20714781
TOT_020000652	mRNA	TOT_020000652	NC_025261.1	1349366	1352438	D	TOT_020000652	join(<1349366..1351003,1351302..1351392,1351479..1351940,1352128..>1352438)	Theileria orientalis strain Shintoku	20714782
TOT_020000653	mRNA	TOT_020000653	NC_025261.1	1352492	1356219	D	TOT_020000653	join(<1352492..1352656,1352676..1352766,1352803..1352963,1353062..1353211,1353316..1353521,1353780..1354012,1354124..1354488,1354591..1355073,1355247..1355429,1355498..1355623,1355703..1355777,1355891..1356025,1356088..>1356219)	Theileria orientalis strain Shintoku	20714783
TOT_020000654	mRNA	TOT_020000654	NC_025261.1	1356467	1358042	R	TOT_020000654	complement(join(<1356467..1357884,1358009..>1358042))	Theileria orientalis strain Shintoku	20714784
TOT_020000655	mRNA	TOT_020000655	NC_025261.1	1359446	1364083	D	TOT_020000655	<1359446..>1364083	Theileria orientalis strain Shintoku	20714785
TOT_020000656	mRNA	TOT_020000656	NC_025261.1	1364622	1369172	D	TOT_020000656	join(<1364622..1365137,1365237..1368719,1368798..>1369172)	Theileria orientalis strain Shintoku	20714786
TOT_020000657	mRNA	TOT_020000657	NC_025261.1	1369994	1372017	D	TOT_020000657	join(<1369994..1371955,1371991..>1372017)	Theileria orientalis strain Shintoku	20714787
TOT_020000658	mRNA	TOT_020000658	NC_025261.1	1373012	1374996	D	TOT_020000658	join(<1373012..1374859,1374892..>1374996)	Theileria orientalis strain Shintoku	20714788
TOT_020000659	mRNA	TOT_020000659	NC_025261.1	1375265	1377482	R	TOT_020000659	complement(join(<1375265..1375379,1375462..>1377482))	Theileria orientalis strain Shintoku	20714789
TOT_020001078	mRNA	TOT_020001078	NC_025261.1	1378736	1379031	D	TOT_020001078	join(<1378736..1378738,1378770..1378829,1378859..1378921,1378951..>1379031)	Theileria orientalis strain Shintoku	20715169
TOT_020000661	mRNA	TOT_020000661	NC_025261.1	1379595	1381524	D	TOT_020000661	join(<1379595..1380429,1380608..1380696,1380765..1380842,1380895..1381198,1381310..>1381524)	Theileria orientalis strain Shintoku	20714790
TOT_020000662	mRNA	TOT_020000662	NC_025261.1	1381846	1385004	R	TOT_020000662	complement(join(<1381846..1383420,1383527..1383652,1383738..1384085,1384144..>1385004))	Theileria orientalis strain Shintoku	20714791
TOT_020001079	mRNA	TOT_020001079	NC_025261.1	1386419	1387044	D	TOT_020001079	join(<1386419..1386681,1386730..1386905,1386947..>1387044)	Theileria orientalis strain Shintoku	20715170
TOT_020000664	mRNA	TOT_020000664	NC_025261.1	1387180	1387884	D	TOT_020000664	join(<1387180..1387258,1387411..1387537,1387692..>1387884)	Theileria orientalis strain Shintoku	20714792
TOT_020000665	mRNA	TOT_020000665	NC_025261.1	1388034	1390223	R	TOT_020000665	complement(join(<1388034..1388368,1388606..1389059,1389195..>1390223))	Theileria orientalis strain Shintoku	20714793
TOT_020000666	mRNA	TOT_020000666	NC_025261.1	1390382	1391239	R	TOT_020000666	complement(join(<1390382..1390633,1390931..>1391239))	Theileria orientalis strain Shintoku	20714794
TOT_020000667	mRNA	TOT_020000667	NC_025261.1	1392430	1393746	D	TOT_020000667	<1392430..>1393746	Theileria orientalis strain Shintoku	20714795
TOT_020000668	mRNA	TOT_020000668	NC_025261.1	1393961	1394899	R	TOT_020000668	complement(<1393961..>1394899)	Theileria orientalis strain Shintoku	20714796
TOT_020000669	mRNA	TOT_020000669	NC_025261.1	1395255	1396169	R	TOT_020000669	complement(join(<1395255..1395409,1395598..1395708,1395818..1395922,1396091..>1396169))	Theileria orientalis strain Shintoku	20714797
TOT_020000670	mRNA	TOT_020000670	NC_025261.1	1397111	1400160	D	TOT_020000670	join(<1397111..1397155,1397186..1397334,1397565..1397751,1397782..1398312,1398490..1398509,1398654..1399147,1399346..1399590,1399657..>1400160)	Theileria orientalis strain Shintoku	20714798
TOT_020000671	mRNA	TOT_020000671	NC_025261.1	1400476	1400988	R	TOT_020000671	complement(join(<1400476..1400535,1400569..>1400988))	Theileria orientalis strain Shintoku	20714799
TOT_020000672	mRNA	TOT_020000672	NC_025261.1	1401064	1402948	R	TOT_020000672	complement(join(<1401064..1401302,1401434..1401839,1401927..1402414,1402521..1402676,1402759..>1402948))	Theileria orientalis strain Shintoku	20714800
TOT_020000673	mRNA	TOT_020000673	NC_025261.1	1403263	1403370	D	TOT_020000673	<1403263..>1403370	Theileria orientalis strain Shintoku	20714801
TOT_020000674	mRNA	TOT_020000674	NC_025261.1	1403540	1404546	D	TOT_020000674	join(<1403540..1403571,1403658..1403870,1403900..1404088,1404132..1404173,1404205..1404261,1404358..1404436,1404469..>1404546)	Theileria orientalis strain Shintoku	20714802
TOT_020000675	mRNA	TOT_020000675	NC_025261.1	1404748	1405659	R	TOT_020000675	complement(join(<1404748..1404959,1405041..1405198,1405229..1405309,1405348..1405498,1405575..>1405659))	Theileria orientalis strain Shintoku	20714803
TOT_020001080	mRNA	TOT_020001080	NC_025261.1	1405851	1407953	D	TOT_020001080	join(<1405851..1405971,1406004..1406205,1406238..1406529,1406651..1406724,1406785..1406982,1407016..1407146,1407190..1407287,1407323..1407402,1407448..1407706,1407741..>1407953)	Theileria orientalis strain Shintoku	20715171
TOT_020001081	mRNA	TOT_020001081	NC_025261.1	1407978	1408577	D	TOT_020001081	join(<1407978..1408038,1408070..1408248,1408407..>1408577)	Theileria orientalis strain Shintoku	20715172
TOT_020000677	mRNA	TOT_020000677	NC_025261.1	1408744	1410216	D	TOT_020000677	<1408744..>1410216	Theileria orientalis strain Shintoku	20714804
TOT_020000678	mRNA	TOT_020000678	NC_025261.1	1410566	1421806	R	TOT_020000678	complement(<1410566..>1421806)	Theileria orientalis strain Shintoku	20714805
TOT_020000679	mRNA	TOT_020000679	NC_025261.1	1422456	1423532	R	TOT_020000679	complement(<1422456..>1423532)	Theileria orientalis strain Shintoku	20714806
TOT_020000680	mRNA	TOT_020000680	NC_025261.1	1424589	1438229	D	TOT_020000680	join(<1424589..1427582,1428114..1429104,1429324..>1438229)	Theileria orientalis strain Shintoku	20714807
TOT_020000681	mRNA	TOT_020000681	NC_025261.1	1438939	1439541	R	TOT_020000681	complement(join(<1438939..1439199,1439287..>1439541))	Theileria orientalis strain Shintoku	20714808
TOT_020000682	mRNA	TOT_020000682	NC_025261.1	1439734	1441846	D	TOT_020000682	join(<1439734..1439881,1439918..1440164,1440258..1440429,1440462..1440615,1440655..1440866,1440899..1441020,1441184..1441243,1441275..1441371,1441540..1441659,1441690..1441749,1441781..>1441846)	Theileria orientalis strain Shintoku	20714809
TOT_020000683	mRNA	TOT_020000683	NC_025261.1	1441899	1442112	D	TOT_020000683	join(<1441899..1441976,1441987..>1442112)	Theileria orientalis strain Shintoku	20714810
TOT_020000684	mRNA	TOT_020000684	NC_025261.1	1442653	1445034	D	TOT_020000684	join(<1442653..1443120,1443196..>1445034)	Theileria orientalis strain Shintoku	20714811
TOT_020000685	mRNA	TOT_020000685	NC_025261.1	1445412	1445909	D	TOT_020000685	join(<1445412..1445478,1445728..>1445909)	Theileria orientalis strain Shintoku	20714812
TOT_020000686	mRNA	TOT_020000686	NC_025261.1	1446295	1447885	D	TOT_020000686	join(<1446295..1446337,1446397..1446509,1446543..1446633,1446740..1446906,1446939..1447198,1447451..1447736,1447841..>1447885)	Theileria orientalis strain Shintoku	20714813
TOT_020000687	mRNA	TOT_020000687	NC_025261.1	1447954	1448776	R	TOT_020000687	complement(join(<1447954..1448095,1448254..1448449,1448509..>1448776))	Theileria orientalis strain Shintoku	20714814
TOT_020000688	mRNA	TOT_020000688	NC_025261.1	1449034	1451069	D	TOT_020000688	join(<1449034..1449073,1449107..1450728,1450821..1450916,1450980..>1451069)	Theileria orientalis strain Shintoku	20714815
TOT_020000689	mRNA	TOT_020000689	NC_025261.1	1451100	1453195	D	TOT_020000689	join(<1451100..1452056,1452208..1452549,1452842..>1453195)	Theileria orientalis strain Shintoku	20714816
TOT_020000690	mRNA	TOT_020000690	NC_025261.1	1453517	1454650	R	TOT_020000690	complement(join(<1453517..1453784,1453963..1454140,1454274..1454357,1454392..>1454650))	Theileria orientalis strain Shintoku	20714817
TOT_020000691	mRNA	TOT_020000691	NC_025261.1	1454968	1457318	D	TOT_020000691	join(<1454968..1455518,1455581..1455758,1455790..1455870,1456023..1456127,1456139..1456220,1456261..1456573,1456793..1457091,1457134..>1457318)	Theileria orientalis strain Shintoku	20714818
TOT_020000692	mRNA	TOT_020000692	NC_025261.1	1457572	1458350	R	TOT_020000692	complement(join(<1457572..1457762,1457845..1458072,1458124..1458286,1458324..>1458350))	Theileria orientalis strain Shintoku	20714819
TOT_020000693	mRNA	TOT_020000693	NC_025261.1	1458595	1458897	D	TOT_020000693	join(<1458595..1458639,1458675..1458806,1458838..>1458897)	Theileria orientalis strain Shintoku	20714820
TOT_020000694	mRNA	TOT_020000694	NC_025261.1	1458907	1459590	D	TOT_020000694	<1458907..>1459590	Theileria orientalis strain Shintoku	20714821
TOT_020000695	mRNA	TOT_020000695	NC_025261.1	1459818	1464006	D	TOT_020000695	join(<1459818..1459968,1460010..1460209,1460345..1460575,1460686..1460870,1460968..1461298,1461487..1461669,1461754..1461897,1461938..1462111,1462421..1462878,1463062..1463755,1463881..>1464006)	Theileria orientalis strain Shintoku	20714822
TOT_020000696	mRNA	TOT_020000696	NC_025261.1	1464031	1467071	D	TOT_020000696	join(<1464031..1464366,1464406..1464498,1464597..1464674,1464686..1464911,1464964..1465033,1465167..1465604,1465636..1465711,1465806..1465922,1465978..1466073,1466164..1466223,1466280..1466353,1466465..1466545,1466577..1466736,1466952..>1467071)	Theileria orientalis strain Shintoku	20714823
TOT_020000697	mRNA	TOT_020000697	NC_025261.1	1467286	1468281	R	TOT_020000697	complement(<1467286..>1468281)	Theileria orientalis strain Shintoku	20714824
TOT_020000698	mRNA	TOT_020000698	NC_025261.1	1468574	1469769	D	TOT_020000698	join(<1468574..1468800,1468835..1468935,1469006..1469216,1469280..1469365,1469400..1469594,1469630..>1469769)	Theileria orientalis strain Shintoku	20714825
TOT_020000699	mRNA	TOT_020000699	NC_025261.1	1470241	1472930	D	TOT_020000699	join(<1470241..1470377,1470457..1470704,1470736..1470868,1470974..1471235,1471272..1472316,1472449..>1472930)	Theileria orientalis strain Shintoku	20714826
TOT_020000700	mRNA	TOT_020000700	NC_025261.1	1473137	1475971	R	TOT_020000700	complement(join(<1473137..1473488,1473619..1473834,1474071..1474423,1474706..1474821,1474945..1475371,1475402..1475500,1475535..1475813,1475906..>1475971))	Theileria orientalis strain Shintoku	20714827
TOT_020000701	mRNA	TOT_020000701	NC_025261.1	1476119	1478559	D	TOT_020000701	join(<1476119..1476273,1476322..1476630,1476660..1477019,1477142..1477533,1477665..1477852,1478044..1478167,1478338..1478515,1478529..>1478559)	Theileria orientalis strain Shintoku	20714828
TOT_020000702	mRNA	TOT_020000702	NC_025261.1	1478713	1479645	R	TOT_020000702	complement(join(<1478713..1478892,1478985..1479066,1479116..1479216,1479246..1479311,1479345..1479429,1479482..>1479645))	Theileria orientalis strain Shintoku	20714829
TOT_020000703	mRNA	TOT_020000703	NC_025261.1	1479733	1480958	D	TOT_020000703	join(<1479733..1479859,1479890..1480144,1480213..>1480958)	Theileria orientalis strain Shintoku	20714830
TOT_020000704	mRNA	TOT_020000704	NC_025261.1	1481248	1482047	R	TOT_020000704	complement(join(<1481248..1481539,1481608..1481741,1481874..1481932,1481975..>1482047))	Theileria orientalis strain Shintoku	20714831
TOT_020000705	mRNA	TOT_020000705	NC_025261.1	1482713	1483390	D	TOT_020000705	join(<1482713..1482730,1482845..1483152,1483345..>1483390)	Theileria orientalis strain Shintoku	20714832
TOT_020000706	mRNA	TOT_020000706	NC_025261.1	1483618	1484964	R	TOT_020000706	complement(join(<1483618..1483793,1484053..1484195,1484278..1484420,1484499..1484572,1484657..1484725,1484813..1484903,1484935..>1484964))	Theileria orientalis strain Shintoku	20714833
TOT_020000707	mRNA	TOT_020000707	NC_025261.1	1485165	1486731	R	TOT_020000707	complement(join(<1485165..1485197,1485267..1485548,1485613..1485689,1485794..1485863,1485918..1486036,1486102..1486221,1486331..1486470,1486610..>1486731))	Theileria orientalis strain Shintoku	20714834
TOT_020000708	mRNA	TOT_020000708	NC_025261.1	1487047	1489050	R	TOT_020000708	complement(join(<1487047..1487437,1487564..>1489050))	Theileria orientalis strain Shintoku	20714835
TOT_020000709	mRNA	TOT_020000709	NC_025261.1	1489381	1493284	D	TOT_020000709	join(<1489381..1489875,1489970..1491156,1491318..1491621,1491730..1491798,1492096..1492099,1492175..1492397,1492623..1492850,1492921..1492985,1493067..>1493284)	Theileria orientalis strain Shintoku	20714836
TOT_020000710	mRNA	TOT_020000710	NC_025261.1	1493771	1495618	R	TOT_020000710	complement(join(<1493771..1495543,1495595..>1495618))	Theileria orientalis strain Shintoku	20714837
TOT_020000711	mRNA	TOT_020000711	NC_025261.1	1496165	1498339	R	TOT_020000711	complement(join(<1496165..1497938,1498254..>1498339))	Theileria orientalis strain Shintoku	20714838
TOT_020000712	mRNA	TOT_020000712	NC_025261.1	1498651	1500447	R	TOT_020000712	complement(<1498651..>1500447)	Theileria orientalis strain Shintoku	20714839
TOT_020000713	mRNA	TOT_020000713	NC_025261.1	1500727	1502642	R	TOT_020000713	complement(join(<1500727..1500834,1500867..1500935,1500970..1501857,1502045..1502137,1502191..1502286,1502352..1502509,1502546..>1502642))	Theileria orientalis strain Shintoku	20714840
TOT_020000714	mRNA	TOT_020000714	NC_025261.1	1502783	1504409	D	TOT_020000714	join(<1502783..1503005,1503088..1503537,1503575..1503842,1503962..>1504409)	Theileria orientalis strain Shintoku	20714841
TOT_020000715	mRNA	TOT_020000715	NC_025261.1	1504706	1506726	R	TOT_020000715	complement(join(<1504706..1505336,1505578..1505814,1505944..1506032,1506064..1506157,1506192..1506285,1506409..1506642,1506684..>1506726))	Theileria orientalis strain Shintoku	20714842
TOT_020000716	mRNA	TOT_020000716	NC_025261.1	1507028	1508077	D	TOT_020000716	join(<1507028..1507217,1507269..1507376,1507442..1507626,1507661..1507802,1507836..1507927,1507967..>1508077)	Theileria orientalis strain Shintoku	20714843
TOT_020000717	mRNA	TOT_020000717	NC_025261.1	1508374	1508538	R	TOT_020000717	complement(<1508374..>1508538)	Theileria orientalis strain Shintoku	20714844
TOT_020000718	mRNA	TOT_020000718	NC_025261.1	1508593	1509201	D	TOT_020000718	join(<1508593..1508690,1508892..>1509201)	Theileria orientalis strain Shintoku	20714845
TOT_020000719	mRNA	TOT_020000719	NC_025261.1	1509476	1510192	R	TOT_020000719	complement(<1509476..>1510192)	Theileria orientalis strain Shintoku	20714846
TOT_020000720	mRNA	TOT_020000720	NC_025261.1	1511398	1515867	R	TOT_020000720	complement(join(<1511398..1514159,1515390..>1515867))	Theileria orientalis strain Shintoku	20714847
TOT_020000721	mRNA	TOT_020000721	NC_025261.1	1516966	1521522	R	TOT_020000721	complement(<1516966..>1521522)	Theileria orientalis strain Shintoku	20714848
TOT_020000722	mRNA	TOT_020000722	NC_025261.1	1522619	1527169	R	TOT_020000722	complement(<1522619..>1527169)	Theileria orientalis strain Shintoku	20714849
TOT_020001082	mRNA	TOT_020001082	NC_025261.1	1528717	1529598	R	TOT_020001082	complement(<1528717..>1529598)	Theileria orientalis strain Shintoku	20715173
TOT_020000724	mRNA	TOT_020000724	NC_025261.1	1531000	1533120	R	TOT_020000724	complement(<1531000..>1533120)	Theileria orientalis strain Shintoku	20714850
TOT_020000725	mRNA	TOT_020000725	NC_025261.1	1533340	1533456	R	TOT_020000725	complement(<1533340..>1533456)	Theileria orientalis strain Shintoku	20714851
TOT_020000726	mRNA	TOT_020000726	NC_025261.1	1533647	1535651	R	TOT_020000726	complement(join(<1533647..1533802,1533834..1533897,1533962..1534133,1534199..1534262,1534353..1534547,1534704..1534793,1534869..1535101,1535213..>1535651))	Theileria orientalis strain Shintoku	20714852
TOT_020000727	mRNA	TOT_020000727	NC_025261.1	1536237	1536672	D	TOT_020000727	join(<1536237..1536246,1536277..1536416,1536505..>1536672)	Theileria orientalis strain Shintoku	20714853
TOT_020001083	mRNA	TOT_020001083	NC_025261.1	1536912	1540364	D	TOT_020001083	join(<1536912..1536972,1537026..1537242,1537388..1537660,1537802..1538796,1539019..1539354,1539634..>1540364)	Theileria orientalis strain Shintoku	20715174
TOT_020000729	mRNA	TOT_020000729	NC_025261.1	1541452	1543070	D	TOT_020000729	join(<1541452..1541881,1542052..>1543070)	Theileria orientalis strain Shintoku	20714854
TOT_020000730	mRNA	TOT_020000730	NC_025261.1	1543149	1544771	R	TOT_020000730	complement(join(<1543149..1543246,1543278..1543358,1543431..1543515,1543556..1543672,1543761..1543857,1543894..1543930,1544116..1544182,1544213..1544285,1544339..1544423,1544518..1544621,1544668..>1544771))	Theileria orientalis strain Shintoku	20714855
TOT_020001084	mRNA	TOT_020001084	NC_025261.1	1544947	1546154	R	TOT_020001084	complement(join(<1544947..1545161,1545230..1545381,1545471..1545589,1545814..1545957,1546044..>1546154))	Theileria orientalis strain Shintoku	20715175
TOT_020000732	mRNA	TOT_020000732	NC_025261.1	1546504	1547897	R	TOT_020000732	complement(join(<1546504..1546685,1546786..1546843,1547065..1547186,1547218..1547246,1547322..1547721,1547834..>1547897))	Theileria orientalis strain Shintoku	20714856
TOT_020001085	mRNA	TOT_020001085	NC_025261.1	1547967	1550646	R	TOT_020001085	complement(join(<1547967..1548279,1548462..1548973,1549108..1549562,1549707..1549959,1550111..1550368,1550542..>1550646))	Theileria orientalis strain Shintoku	20715176
TOT_020000734	mRNA	TOT_020000734	NC_025261.1	1550670	1550930	D	TOT_020000734	join(<1550670..1550682,1550812..>1550930)	Theileria orientalis strain Shintoku	20714857
TOT_020000735	mRNA	TOT_020000735	NC_025261.1	1550988	1551092	D	TOT_020000735	<1550988..>1551092	Theileria orientalis strain Shintoku	20714858
TOT_020000736	mRNA	TOT_020000736	NC_025261.1	1551098	1555626	R	TOT_020000736	complement(join(<1551098..1551184,1551243..1551381,1551535..1551647,1551737..1551885,1552044..1552209,1552366..1552638,1552874..1554300,1554481..1554595,1554660..1554827,1554942..1555086,1555121..1555448,1555521..>1555626))	Theileria orientalis strain Shintoku	20714859
TOT_020000737	mRNA	TOT_020000737	NC_025261.1	1555690	1555800	D	TOT_020000737	<1555690..>1555800	Theileria orientalis strain Shintoku	20714860
TOT_020000738	mRNA	TOT_020000738	NC_025261.1	1556260	1558710	D	TOT_020000738	join(<1556260..1558311,1558519..>1558710)	Theileria orientalis strain Shintoku	20714861
TOT_020000739	mRNA	TOT_020000739	NC_025261.1	1558778	1558915	R	TOT_020000739	complement(<1558778..>1558915)	Theileria orientalis strain Shintoku	20714862
TOT_020000740	mRNA	TOT_020000740	NC_025261.1	1558996	1560481	R	TOT_020000740	complement(join(<1558996..1559061,1559273..>1560481))	Theileria orientalis strain Shintoku	20714863
TOT_020000741	mRNA	TOT_020000741	NC_025261.1	1560563	1560679	R	TOT_020000741	complement(<1560563..>1560679)	Theileria orientalis strain Shintoku	20714864
TOT_020000742	mRNA	TOT_020000742	NC_025261.1	1561835	1562518	D	TOT_020000742	<1561835..>1562518	Theileria orientalis strain Shintoku	20714865
TOT_020000743	mRNA	TOT_020000743	NC_025261.1	1563029	1563904	D	TOT_020000743	<1563029..>1563904	Theileria orientalis strain Shintoku	20714866
TOT_020000744	mRNA	TOT_020000744	NC_025261.1	1564202	1565077	R	TOT_020000744	complement(<1564202..>1565077)	Theileria orientalis strain Shintoku	20714867
TOT_020000745	mRNA	TOT_020000745	NC_025261.1	1565349	1565978	R	TOT_020000745	complement(join(<1565349..1565834,1565868..>1565978))	Theileria orientalis strain Shintoku	20714868
TOT_020001086	mRNA	TOT_020001086	NC_025261.1	1566956	1568560	D	TOT_020001086	<1566956..>1568560	Theileria orientalis strain Shintoku	20715177
TOT_020000746	mRNA	TOT_020000746	NC_025261.1	1568682	1569074	D	TOT_020000746	<1568682..>1569074	Theileria orientalis strain Shintoku	20714869
TOT_020000747	mRNA	TOT_020000747	NC_025261.1	1569408	1571297	R	TOT_020000747	complement(join(<1569408..1570173,1570253..1570537,1570598..1571099,1571130..1571157,1571193..>1571297))	Theileria orientalis strain Shintoku	20714870
TOT_020000748	mRNA	TOT_020000748	NC_025261.1	1571445	1573828	D	TOT_020000748	join(<1571445..1572798,1572870..>1573828)	Theileria orientalis strain Shintoku	20714871
TOT_020000749	mRNA	TOT_020000749	NC_025261.1	1574027	1578427	D	TOT_020000749	join(<1574027..1575123,1575208..1576136,1576569..1577289,1577941..>1578427)	Theileria orientalis strain Shintoku	20714872
TOT_020000750	mRNA	TOT_020000750	NC_025261.1	1578736	1579536	D	TOT_020000750	join(<1578736..1579015,1579100..>1579536)	Theileria orientalis strain Shintoku	20714873
TOT_020000751	mRNA	TOT_020000751	NC_025261.1	1579910	1583156	R	TOT_020000751	complement(join(<1579910..1580685,1580893..1582519,1582583..1582998,1583135..>1583156))	Theileria orientalis strain Shintoku	20714874
TOT_020000752	mRNA	TOT_020000752	NC_025261.1	1583815	1584441	R	TOT_020000752	complement(<1583815..>1584441)	Theileria orientalis strain Shintoku	20714875
TOT_020000753	mRNA	TOT_020000753	NC_025261.1	1584907	1585584	R	TOT_020000753	complement(join(<1584907..1585176,1585378..>1585584))	Theileria orientalis strain Shintoku	20714876
TOT_020001087	mRNA	TOT_020001087	NC_025261.1	1586418	1586984	D	TOT_020001087	<1586418..>1586984	Theileria orientalis strain Shintoku	20715178
TOT_020000755	mRNA	TOT_020000755	NC_025261.1	1587589	1588796	D	TOT_020000755	join(<1587589..1587591,1587806..1588061,1588492..>1588796)	Theileria orientalis strain Shintoku	20714877
TOT_020000756	mRNA	TOT_020000756	NC_025261.1	1589743	1589910	D	TOT_020000756	<1589743..>1589910	Theileria orientalis strain Shintoku	20714878
TOT_020000757	mRNA	TOT_020000757	NC_025261.1	1590113	1591153	R	TOT_020000757	complement(join(<1590113..1590355,1590477..1590671,1590764..>1591153))	Theileria orientalis strain Shintoku	20714879
TOT_020001088	mRNA	TOT_020001088	NC_025261.1	1591213	1592909	R	TOT_020001088	complement(join(<1591213..1591319,1591532..1591649,1591817..1591856,1591951..1592011,1592141..1592464,1592891..>1592909))	Theileria orientalis strain Shintoku	20715179
TOT_020000759	mRNA	TOT_020000759	NC_025261.1	1593035	1594279	R	TOT_020000759	complement(join(<1593035..1593612,1593682..>1594279))	Theileria orientalis strain Shintoku	20714880
TOT_020000760	mRNA	TOT_020000760	NC_025261.1	1594688	1595789	D	TOT_020000760	join(<1594688..1594809,1594950..1595061,1595670..>1595789)	Theileria orientalis strain Shintoku	20714881
TOT_020000761	mRNA	TOT_020000761	NC_025261.1	1595964	1596722	D	TOT_020000761	<1595964..>1596722	Theileria orientalis strain Shintoku	20714882
TOT_020000762	mRNA	TOT_020000762	NC_025261.1	1597203	1611354	R	TOT_020000762	complement(join(<1597203..1599078,1599322..1599496,1599548..1599835,1599896..1600193,1600323..1601426,1601472..1601639,1601814..1602047,1602087..1603558,1603650..1603906,1603973..1605606,1605826..1606945,1607186..1609430,1609551..1610552,1610625..>1611354))	Theileria orientalis strain Shintoku	20714883
TOT_020000763	mRNA	TOT_020000763	NC_025261.1	1611891	1613876	R	TOT_020000763	complement(<1611891..>1613876)	Theileria orientalis strain Shintoku	20714884
TOT_020000764	mRNA	TOT_020000764	NC_025261.1	1614026	1615174	D	TOT_020000764	join(<1614026..1614116,1614301..1614392,1614504..1614547,1614652..1614718,1614905..>1615174)	Theileria orientalis strain Shintoku	20714885
TOT_020000765	mRNA	TOT_020000765	NC_025261.1	1615191	1618203	R	TOT_020000765	complement(join(<1615191..1615301,1615533..1615711,1615790..1616317,1616376..1616643,1616890..1617049,1617127..1617305,1617338..1617396,1617516..1617860,1618140..>1618203))	Theileria orientalis strain Shintoku	20714886
TOT_020000766	mRNA	TOT_020000766	NC_025261.1	1618751	1619893	D	TOT_020000766	join(<1618751..1618890,1619029..>1619893)	Theileria orientalis strain Shintoku	20714887
TOT_020000767	mRNA	TOT_020000767	NC_025261.1	1620395	1622049	D	TOT_020000767	join(<1620395..1621813,1621930..>1622049)	Theileria orientalis strain Shintoku	20714888
TOT_020001089	mRNA	TOT_020001089	NC_025261.1	1622145	1622834	D	TOT_020001089	join(<1622145..1622327,1622607..>1622834)	Theileria orientalis strain Shintoku	20715180
TOT_020000769	mRNA	TOT_020000769	NC_025261.1	1622904	1623788	R	TOT_020000769	complement(join(<1622904..1623026,1623055..1623251,1623323..>1623788))	Theileria orientalis strain Shintoku	20714889
TOT_020000770	mRNA	TOT_020000770	NC_025261.1	1624013	1625701	R	TOT_020000770	complement(join(<1624013..1624291,1624484..1625312,1625358..1625461,1625537..>1625701))	Theileria orientalis strain Shintoku	20714890
TOT_020000771	mRNA	TOT_020000771	NC_025261.1	1626572	1627315	D	TOT_020000771	<1626572..>1627315	Theileria orientalis strain Shintoku	20714891
TOT_020000772	mRNA	TOT_020000772	NC_025261.1	1627518	1628649	D	TOT_020000772	join(<1627518..1627701,1627825..1627901,1627994..1628081,1628154..1628289,1628405..1628488,1628580..>1628649)	Theileria orientalis strain Shintoku	20714892
TOT_020000773	mRNA	TOT_020000773	NC_025261.1	1628710	1628817	R	TOT_020000773	complement(<1628710..>1628817)	Theileria orientalis strain Shintoku	20714893
TOT_020000774	mRNA	TOT_020000774	NC_025261.1	1628867	1637422	R	TOT_020000774	complement(join(<1628867..1629354,1629583..1630022,1630260..1631291,1631364..1631789,1631877..1632529,1632587..1633069,1633361..1633873,1633979..1634091,1634164..1634425,1634822..1635251,1635417..1635829,1635905..>1637422))	Theileria orientalis strain Shintoku	20714894
TOT_020000775	mRNA	TOT_020000775	NC_025261.1	1637914	1639179	D	TOT_020000775	join(<1637914..1638300,1638385..>1639179)	Theileria orientalis strain Shintoku	20714895
TOT_020000776	mRNA	TOT_020000776	NC_025261.1	1639262	1640177	R	TOT_020000776	complement(join(<1639262..1639354,1639422..1639530,1639599..1639685,1639743..1639902,1639973..>1640177))	Theileria orientalis strain Shintoku	20714896
TOT_020000777	mRNA	TOT_020000777	NC_025261.1	1640489	1641067	D	TOT_020000777	<1640489..>1641067	Theileria orientalis strain Shintoku	20714897
TOT_020000778	mRNA	TOT_020000778	NC_025261.1	1641509	1643248	R	TOT_020000778	complement(join(<1641509..1641978,1642500..1642680,1642712..1642811,1642955..1643088,1643195..>1643248))	Theileria orientalis strain Shintoku	20714898
TOT_020000779	mRNA	TOT_020000779	NC_025261.1	1643682	1644258	D	TOT_020000779	join(<1643682..1643756,1643810..1643879,1644218..>1644258)	Theileria orientalis strain Shintoku	20714899
TOT_020000780	mRNA	TOT_020000780	NC_025261.1	1644393	1646851	R	TOT_020000780	complement(join(<1644393..1644411,1644543..>1646851))	Theileria orientalis strain Shintoku	20714900
TOT_020000781	mRNA	TOT_020000781	NC_025261.1	1648620	1649996	D	TOT_020000781	<1648620..>1649996	Theileria orientalis strain Shintoku	20714901
TOT_020000782	mRNA	TOT_020000782	NC_025261.1	1650377	1654924	R	TOT_020000782	complement(<1650377..>1654924)	Theileria orientalis strain Shintoku	20714902
TOT_020000783	mRNA	TOT_020000783	NC_025261.1	1655737	1656261	D	TOT_020000783	join(<1655737..1655837,1656198..>1656261)	Theileria orientalis strain Shintoku	20714903
TOT_020000784	mRNA	TOT_020000784	NC_025261.1	1656378	1656479	D	TOT_020000784	<1656378..>1656479	Theileria orientalis strain Shintoku	20714904
TOT_020000785	mRNA	TOT_020000785	NC_025261.1	1656571	1657980	D	TOT_020000785	<1656571..>1657980	Theileria orientalis strain Shintoku	20714905
TOT_020000786	mRNA	TOT_020000786	NC_025261.1	1658520	1659361	R	TOT_020000786	complement(join(<1658520..1659274,1659355..>1659361))	Theileria orientalis strain Shintoku	20714906
TOT_020001090	mRNA	TOT_020001090	NC_025261.1	1660102	1660812	D	TOT_020001090	join(<1660102..1660311,1660420..1660467,1660548..1660624,1660743..>1660812)	Theileria orientalis strain Shintoku	20715181
TOT_020001091	mRNA	TOT_020001091	NC_025261.1	1660938	1661021	D	TOT_020001091	<1660938..>1661021	Theileria orientalis strain Shintoku	20715182
TOT_020001092	mRNA	TOT_020001092	NC_025261.1	1662154	1663287	D	TOT_020001092	join(<1662154..1662203,1662264..1662388,1662541..1662663,1662815..1662876,1662927..1663058,1663108..>1663287)	Theileria orientalis strain Shintoku	20715183
TOT_020000790	mRNA	TOT_020000790	NC_025261.1	1671821	1674702	D	TOT_020000790	join(<1671821..1671907,1671974..1672042,1672108..1672234,1672366..1673202,1673379..1673502,1673534..1674267,1674396..1674577,1674628..>1674702)	Theileria orientalis strain Shintoku	20714907
TOT_020000791	mRNA	TOT_020000791	NC_025261.1	1676042	1679035	R	TOT_020000791	complement(<1676042..>1679035)	Theileria orientalis strain Shintoku	20714908
TOT_020000792	mRNA	TOT_020000792	NC_025261.1	1679228	1679923	D	TOT_020000792	join(<1679228..1679381,1679517..>1679923)	Theileria orientalis strain Shintoku	20714909
TOT_020000793	mRNA	TOT_020000793	NC_025261.1	1680052	1683272	D	TOT_020000793	join(<1680052..1680498,1680862..1682104,1682198..1682498,1682598..1682821,1683097..>1683272)	Theileria orientalis strain Shintoku	20714910
TOT_020000794	mRNA	TOT_020000794	NC_025261.1	1683522	1688155	R	TOT_020000794	complement(join(<1683522..1687704,1687791..1687863,1687981..>1688155))	Theileria orientalis strain Shintoku	20714911
TOT_020000795	mRNA	TOT_020000795	NC_025261.1	1689090	1693329	D	TOT_020000795	join(<1689090..1689560,1689657..1689886,1689971..1690040,1690133..1690269,1690402..1690584,1690664..1690763,1690838..1691241,1691299..1692368,1692473..1692649,1692717..1692914,1693037..>1693329)	Theileria orientalis strain Shintoku	20714912
TOT_020000796	mRNA	TOT_020000796	NC_025261.1	1693387	1694918	R	TOT_020000796	complement(join(<1693387..1693788,1694037..1694424,1694461..>1694918))	Theileria orientalis strain Shintoku	20714913
TOT_020001093	mRNA	TOT_020001093	NC_025261.1	1695363	1697447	D	TOT_020001093	join(<1695363..1695485,1695666..1696079,1696235..1696486,1696623..1696691,1696730..1696934,1697043..1697161,1697304..>1697447)	Theileria orientalis strain Shintoku	20715184
TOT_020000798	mRNA	TOT_020000798	NC_025261.1	1697890	1698813	D	TOT_020000798	join(<1697890..1697905,1698070..1698153,1698262..1698346,1698534..>1698813)	Theileria orientalis strain Shintoku	20714914
TOT_020000799	mRNA	TOT_020000799	NC_025261.1	1699100	1700787	R	TOT_020000799	complement(join(<1699100..1699179,1699435..1699539,1699662..1699748,1699789..1699888,1699970..1700088,1700190..1700282,1700334..1700430,1700551..>1700787))	Theileria orientalis strain Shintoku	20714915
TOT_020000800	mRNA	TOT_020000800	NC_025261.1	1701159	1701404	R	TOT_020000800	complement(<1701159..>1701404)	Theileria orientalis strain Shintoku	20714916
TOT_020000801	mRNA	TOT_020000801	NC_025261.1	1702238	1704017	D	TOT_020000801	join(<1702238..1702262,1702346..1702592,1702655..1702915,1703032..1703142,1703208..1703277,1703526..1703699,1703769..>1704017)	Theileria orientalis strain Shintoku	20714917
TOT_020000802	mRNA	TOT_020000802	NC_025261.1	1704837	1731272	D	TOT_020000802	join(<1704837..1706569,1706657..1707976,1708538..1709120,1709274..1710842,1710957..1711265,1711398..1711408,1711514..1711710,1712227..1712414,1712790..1715111,1715163..1715186,1715265..1716002,1716291..1716869,1717278..1719686,1719846..1720187,1720563..1720897,1721225..1725556,1725836..1726347,1727095..1727764,1728011..>1731272)	Theileria orientalis strain Shintoku	20714918
TOT_020000803	mRNA	TOT_020000803	NC_025261.1	1731404	1732056	R	TOT_020000803	complement(join(<1731404..1731544,1731557..1731715,1731721..>1732056))	Theileria orientalis strain Shintoku	20714919
TOT_020000804	mRNA	TOT_020000804	NC_025261.1	1732182	1732334	D	TOT_020000804	<1732182..>1732334	Theileria orientalis strain Shintoku	20714920
TOT_020000805	mRNA	TOT_020000805	NC_025261.1	1732953	1735022	D	TOT_020000805	join(<1732953..1734692,1734729..>1735022)	Theileria orientalis strain Shintoku	20714921
TOT_020000806	mRNA	TOT_020000806	NC_025261.1	1735946	1738072	D	TOT_020000806	join(<1735946..1736800,1736885..>1738072)	Theileria orientalis strain Shintoku	20714922
TOT_020000807	mRNA	TOT_020000807	NC_025261.1	1738381	1740100	D	TOT_020000807	join(<1738381..1738458,1738543..1738686,1738779..1738940,1738960..1739052,1739127..1739215,1739358..1739505,1739595..1739792,1739966..>1740100)	Theileria orientalis strain Shintoku	20714923
TOT_020000808	mRNA	TOT_020000808	NC_025261.1	1740270	1740608	D	TOT_020000808	<1740270..>1740608	Theileria orientalis strain Shintoku	20714924
TOT_020000809	mRNA	TOT_020000809	NC_025261.1	1740684	1745777	R	TOT_020000809	complement(join(<1740684..1740739,1740938..>1745777))	Theileria orientalis strain Shintoku	20714925
TOT_020000810	mRNA	TOT_020000810	NC_025261.1	1746898	1748384	R	TOT_020000810	complement(join(<1746898..1747073,1747166..1747233,1747318..1747618,1747853..1748053,1748120..>1748384))	Theileria orientalis strain Shintoku	20714926
TOT_020000811	mRNA	TOT_020000811	NC_025261.1	1748626	1749114	R	TOT_020000811	complement(join(<1748626..1748695,1748730..1748805,1748837..1748864,1748923..>1749114))	Theileria orientalis strain Shintoku	20714927
TOT_020000812	mRNA	TOT_020000812	NC_025261.1	1749848	1752502	D	TOT_020000812	join(<1749848..1751894,1752432..>1752502)	Theileria orientalis strain Shintoku	20714928
TOT_020000813	mRNA	TOT_020000813	NC_025261.1	1752696	1754792	R	TOT_020000813	complement(join(<1752696..1752838,1752882..1754308,1754440..>1754792))	Theileria orientalis strain Shintoku	20714929
TOT_020000814	mRNA	TOT_020000814	NC_025261.1	1755162	1757114	D	TOT_020000814	join(<1755162..1755229,1755280..1755434,1755489..1755649,1755681..1755779,1756085..1756265,1756464..1756715,1756726..>1757114)	Theileria orientalis strain Shintoku	20714930
TOT_020000815	mRNA	TOT_020000815	NC_025261.1	1757244	1757888	R	TOT_020000815	complement(<1757244..>1757888)	Theileria orientalis strain Shintoku	20714931
TOT_020000816	mRNA	TOT_020000816	NC_025261.1	1758266	1759324	R	TOT_020000816	complement(<1758266..>1759324)	Theileria orientalis strain Shintoku	20714932
TOT_020000817	mRNA	TOT_020000817	NC_025261.1	1759538	1762471	R	TOT_020000817	complement(join(<1759538..1759688,1759819..1760187,1760390..1760868,1760910..1760969,1761001..1761564,1761594..1761781,1761811..1761984,1762015..1762290,1762378..>1762471))	Theileria orientalis strain Shintoku	20714933
TOT_020000818	mRNA	TOT_020000818	NC_025261.1	1763249	1771261	R	TOT_020000818	complement(<1763249..>1771261)	Theileria orientalis strain Shintoku	20714934
TOT_020000819	mRNA	TOT_020000819	NC_025261.1	1773074	1774307	R	TOT_020000819	complement(join(<1773074..1774185,1774250..>1774307))	Theileria orientalis strain Shintoku	20714935
TOT_020000820	mRNA	TOT_020000820	NC_025261.1	1774551	1775150	R	TOT_020000820	complement(<1774551..>1775150)	Theileria orientalis strain Shintoku	20714936
TOT_020000821	mRNA	TOT_020000821	NC_025261.1	1775633	1785343	R	TOT_020000821	complement(<1775633..>1785343)	Theileria orientalis strain Shintoku	20714937
TOT_020000822	mRNA	TOT_020000822	NC_025261.1	1785418	1785975	D	TOT_020000822	join(<1785418..1785508,1785593..1785691,1785878..>1785975)	Theileria orientalis strain Shintoku	20714938
TOT_020000823	mRNA	TOT_020000823	NC_025261.1	1786515	1793029	R	TOT_020000823	complement(join(<1786515..1788452,1788708..1788831,1789473..1791163,1791201..1791298,1791727..>1793029))	Theileria orientalis strain Shintoku	20714939
TOT_020000824	mRNA	TOT_020000824	NC_025261.1	1793041	1793590	D	TOT_020000824	join(<1793041..1793146,1793505..>1793590)	Theileria orientalis strain Shintoku	20714940
TOT_020000825	mRNA	TOT_020000825	NC_025261.1	1793591	1795798	R	TOT_020000825	complement(<1793591..>1795798)	Theileria orientalis strain Shintoku	20714941
TOT_020000826	mRNA	TOT_020000826	NC_025261.1	1796630	1796743	D	TOT_020000826	<1796630..>1796743	Theileria orientalis strain Shintoku	20714942
TOT_020000827	mRNA	TOT_020000827	NC_025261.1	1796808	1798688	R	TOT_020000827	complement(join(<1796808..1796897,1796929..1797034,1797421..1797562,1797939..1798060,1798213..1798355,1798515..>1798688))	Theileria orientalis strain Shintoku	20714943
TOT_020000828	mRNA	TOT_020000828	NC_025261.1	1799130	1799449	R	TOT_020000828	complement(join(<1799130..1799249,1799312..>1799449))	Theileria orientalis strain Shintoku	20714944
TOT_020000829	mRNA	TOT_020000829	NC_025261.1	1799557	1800073	R	TOT_020000829	complement(join(<1799557..1799610,1799643..1799780,1799879..>1800073))	Theileria orientalis strain Shintoku	20714945
TOT_020000830	mRNA	TOT_020000830	NC_025261.1	1801104	1804040	R	TOT_020000830	complement(join(<1801104..1801225,1801345..1802111,1802300..1802487,1802725..1802919,1802979..1803043,1803135..1803216,1803306..1803420,1803595..1803824,1803936..>1804040))	Theileria orientalis strain Shintoku	20714946
TOT_020000831	mRNA	TOT_020000831	NC_025261.1	1804561	1804998	R	TOT_020000831	complement(<1804561..>1804998)	Theileria orientalis strain Shintoku	20714947
TOT_020000832	mRNA	TOT_020000832	NC_025261.1	1805592	1805804	D	TOT_020000832	<1805592..>1805804	Theileria orientalis strain Shintoku	20714948
TOT_020000833	mRNA	TOT_020000833	NC_025261.1	1805993	1810770	D	TOT_020000833	join(<1805993..1806266,1806304..1806465,1806585..1806721,1806781..1806877,1807036..1807091,1807370..1807531,1807797..1807914,1807986..1808073,1808245..1808516,1808667..1808873,1809109..1809248,1809280..1809406,1809527..>1810770)	Theileria orientalis strain Shintoku	20714949
TOT_020000834	mRNA	TOT_020000834	NC_025261.1	1811329	1812348	R	TOT_020000834	complement(<1811329..>1812348)	Theileria orientalis strain Shintoku	20714950
TOT_020000835	mRNA	TOT_020000835	NC_025261.1	1812899	1816064	R	TOT_020000835	complement(join(<1812899..1812979,1813084..1813208,1813235..1814189,1814446..1814510,1814528..>1816064))	Theileria orientalis strain Shintoku	20714951
TOT_020000836	mRNA	TOT_020000836	NC_025261.1	1817562	1819904	D	TOT_020000836	<1817562..>1819904	Theileria orientalis strain Shintoku	20714952
TOT_020000837	mRNA	TOT_020000837	NC_025261.1	1820540	1821715	R	TOT_020000837	complement(<1820540..>1821715)	Theileria orientalis strain Shintoku	20714953
TOT_020000838	mRNA	TOT_020000838	NC_025261.1	1822048	1831061	R	TOT_020000838	complement(join(<1822048..1822131,1822153..1822317,1822967..1823039,1823144..1823367,1823682..1823765,1823895..1824084,1824373..1826363,1826427..1826950,1827563..1828606,1829045..1830338,1830582..>1831061))	Theileria orientalis strain Shintoku	20714954
TOT_020000839	mRNA	TOT_020000839	NC_025261.1	1832656	1835442	D	TOT_020000839	<1832656..>1835442	Theileria orientalis strain Shintoku	20714955
TOT_020000840	mRNA	TOT_020000840	NC_025261.1	1835981	1837651	R	TOT_020000840	complement(<1835981..>1837651)	Theileria orientalis strain Shintoku	20714956
TOT_020000841	mRNA	TOT_020000841	NC_025261.1	1838295	1843568	D	TOT_020000841	join(<1838295..1838749,1838975..>1843568)	Theileria orientalis strain Shintoku	20714957
TOT_020000842	mRNA	TOT_020000842	NC_025261.1	1844073	1845010	R	TOT_020000842	complement(join(<1844073..1844130,1844218..1844621,1844681..1844759,1844841..1844880,1844935..>1845010))	Theileria orientalis strain Shintoku	20714958
TOT_020000843	mRNA	TOT_020000843	NC_025261.1	1845463	1848162	D	TOT_020000843	join(<1845463..1847149,1847399..1847596,1847924..>1848162)	Theileria orientalis strain Shintoku	20714959
TOT_020000844	mRNA	TOT_020000844	NC_025261.1	1848579	1849412	R	TOT_020000844	complement(<1848579..>1849412)	Theileria orientalis strain Shintoku	20714960
TOT_020000845	mRNA	TOT_020000845	NC_025261.1	1849626	1851239	R	TOT_020000845	complement(join(<1849626..1849645,1849665..1849855,1850035..>1851239))	Theileria orientalis strain Shintoku	20714961
TOT_020000846	mRNA	TOT_020000846	NC_025261.1	1852104	1856133	R	TOT_020000846	complement(join(<1852104..1852494,1852643..1852955,1853100..1853206,1853289..1853383,1853671..1853752,1853837..1853985,1854324..1854591,1854844..1854973,1855061..1855113,1855351..1855573,1855725..>1856133))	Theileria orientalis strain Shintoku	20714962
TOT_020000847	mRNA	TOT_020000847	NC_025261.1	1856967	1858824	D	TOT_020000847	join(<1856967..1857023,1857282..1857362,1857440..1858043,1858131..1858247,1858444..1858599,1858685..>1858824)	Theileria orientalis strain Shintoku	20714963
TOT_020000848	mRNA	TOT_020000848	NC_025261.1	1858938	1860438	R	TOT_020000848	complement(join(<1858938..1859027,1859276..1859404,1859710..1859866,1860103..1860205,1860315..>1860438))	Theileria orientalis strain Shintoku	20714964
TOT_020000849	mRNA	TOT_020000849	NC_025261.1	1860785	1860907	D	TOT_020000849	<1860785..>1860907	Theileria orientalis strain Shintoku	20714965
TOT_020000850	mRNA	TOT_020000850	NC_025261.1	1860995	1862203	R	TOT_020000850	complement(join(<1860995..1861185,1861393..>1862203))	Theileria orientalis strain Shintoku	20714966
TOT_020000851	mRNA	TOT_020000851	NC_025261.1	1862609	1863248	R	TOT_020000851	complement(join(<1862609..1862817,1862898..1863012,1863108..>1863248))	Theileria orientalis strain Shintoku	20714967
TOT_020000852	mRNA	TOT_020000852	NC_025261.1	1863385	1864962	R	TOT_020000852	complement(join(<1863385..1863455,1863473..1864685,1864933..>1864962))	Theileria orientalis strain Shintoku	20714968
TOT_020000853	mRNA	TOT_020000853	NC_025261.1	1865508	1866612	D	TOT_020000853	join(<1865508..1865627,1865772..1865856,1866085..1866200,1866313..1866390,1866511..>1866612)	Theileria orientalis strain Shintoku	20714969
TOT_020000854	mRNA	TOT_020000854	NC_025261.1	1867155	1868504	R	TOT_020000854	complement(join(<1867155..1867251,1867332..1867443,1867550..1867612,1867783..1868171,1868401..>1868504))	Theileria orientalis strain Shintoku	20714970
TOT_020000855	mRNA	TOT_020000855	NC_025261.1	1869620	1872496	D	TOT_020000855	<1869620..>1872496	Theileria orientalis strain Shintoku	20714971
TOT_020000856	mRNA	TOT_020000856	NC_025261.1	1873507	1876014	D	TOT_020000856	join(<1873507..1875495,1875550..>1876014)	Theileria orientalis strain Shintoku	20714972
TOT_020000857	mRNA	TOT_020000857	NC_025261.1	1877607	1884772	D	TOT_020000857	join(<1877607..1880533,1881658..1884268,1884410..>1884772)	Theileria orientalis strain Shintoku	20714973
TOT_020000858	mRNA	TOT_020000858	NC_025261.1	1885257	1886812	R	TOT_020000858	complement(join(<1885257..1885324,1885560..1886521,1886769..>1886812))	Theileria orientalis strain Shintoku	20714974
TOT_020000859	mRNA	TOT_020000859	NC_025261.1	1887168	1889883	R	TOT_020000859	complement(join(<1887168..1887314,1887491..1888188,1888298..1888502,1888680..1888824,1889297..1889388,1889512..>1889883))	Theileria orientalis strain Shintoku	20714975
TOT_020000860	mRNA	TOT_020000860	NC_025261.1	1890933	1892467	R	TOT_020000860	complement(join(<1890933..1891091,1891218..1891761,1891850..1892157,1892393..>1892467))	Theileria orientalis strain Shintoku	20714976
TOT_020000861	mRNA	TOT_020000861	NC_025261.1	1892645	1894191	R	TOT_020000861	complement(join(<1892645..1892707,1892976..1893033,1893065..1893117,1893176..1893364,1893423..1893685,1893817..1893939,1894053..>1894191))	Theileria orientalis strain Shintoku	20714977
TOT_020001094	mRNA	TOT_020001094	NC_025261.1	1894514	1896095	R	TOT_020001094	complement(join(<1894514..1894603,1894692..1894738,1894858..1894953,1895101..1895177,1895275..1895329,1895447..1895545,1895760..1895894,1896050..>1896095))	Theileria orientalis strain Shintoku	20715185
TOT_020000863	mRNA	TOT_020000863	NC_025261.1	1896457	1898127	D	TOT_020000863	join(<1896457..1896651,1897000..1897098,1897207..1897276,1897356..1897458,1897542..1897758,1897790..1897874,1897913..>1898127)	Theileria orientalis strain Shintoku	20714978
TOT_020000864	mRNA	TOT_020000864	NC_025261.1	1898750	1899382	D	TOT_020000864	<1898750..>1899382	Theileria orientalis strain Shintoku	20714979
TOT_020000865	mRNA	TOT_020000865	NC_025261.1	1899756	1902608	D	TOT_020000865	join(<1899756..1899851,1899978..1900246,1900376..1900431,1900495..1900548,1900650..1901241,1901347..1901402,1901557..1901696,1901863..1901978,1902014..1902150,1902191..1902253,1902358..>1902608)	Theileria orientalis strain Shintoku	20714980
TOT_020000866	mRNA	TOT_020000866	NC_025261.1	1903098	1904027	R	TOT_020000866	complement(join(<1903098..1903541,1903749..>1904027))	Theileria orientalis strain Shintoku	20714981
TOT_020000867	mRNA	TOT_020000867	NC_025261.1	1904392	1905656	D	TOT_020000867	join(<1904392..1904467,1904705..1904848,1904926..1905107,1905172..1905227,1905545..>1905656)	Theileria orientalis strain Shintoku	20714982
TOT_020000868	mRNA	TOT_020000868	NC_025261.1	1905810	1908398	R	TOT_020000868	complement(<1905810..>1908398)	Theileria orientalis strain Shintoku	20714983
TOT_020000869	mRNA	TOT_020000869	NC_025261.1	1910165	1912062	R	TOT_020000869	complement(join(<1910165..1910272,1910334..1910879,1910982..1911246,1911338..>1912062))	Theileria orientalis strain Shintoku	20714984
TOT_020000870	mRNA	TOT_020000870	NC_025261.1	1912253	1914832	R	TOT_020000870	complement(join(<1912253..1912304,1912337..1912480,1912762..1912815,1912947..1913007,1913192..1913435,1913577..1913652,1913757..1914071,1914408..1914550,1914737..1914786,1914823..>1914832))	Theileria orientalis strain Shintoku	20714985
TOT_020000871	mRNA	TOT_020000871	NC_025261.1	1915339	1916423	R	TOT_020000871	complement(join(<1915339..1915456,1915515..1915585,1915644..1915784,1915869..1916036,1916175..>1916423))	Theileria orientalis strain Shintoku	20714986
TOT_020000872	mRNA	TOT_020000872	NC_025261.1	1917041	1918047	D	TOT_020000872	join(<1917041..1917265,1917340..1917453,1917561..1917649,1917681..1917733,1917899..>1918047)	Theileria orientalis strain Shintoku	20714987
TOT_020001014	mRNA	TOT_020001014	NC_025261.1	1918301	1920424	D	TOT_020001014	join(<1918301..1918355,1918439..1918486,1918599..1918687,1918814..1918886,1919061..1919867,1919990..1920058,1920220..1920249,1920279..1920365,1920399..>1920424)	Theileria orientalis strain Shintoku	20715105
TOT_020001015	mRNA	TOT_020001015	NC_025261.1	1920556	1923026	D	TOT_020001015	join(<1920556..1920726,1920756..1920920,1921076..1921348,1921416..1921568,1921657..1921740,1921870..1922101,1922180..1922275,1922422..>1923026)	Theileria orientalis strain Shintoku	20715106
TOT_020000873	mRNA	TOT_020000873	NC_025261.1	1923198	1923377	D	TOT_020000873	join(<1923198..1923261,1923313..>1923377)	Theileria orientalis strain Shintoku	20714988
TOT_020000874	mRNA	TOT_020000874	NC_025261.1	1923784	1924592	D	TOT_020000874	join(<1923784..1923945,1923981..1924097,1924131..1924214,1924428..>1924592)	Theileria orientalis strain Shintoku	20714989
TOT_020000875	mRNA	TOT_020000875	NC_025261.1	1925792	1926988	D	TOT_020000875	join(<1925792..1925993,1926171..>1926988)	Theileria orientalis strain Shintoku	20714990
TOT_020000876	mRNA	TOT_020000876	NC_025261.1	1928142	1929173	D	TOT_020000876	<1928142..>1929173	Theileria orientalis strain Shintoku	20714991
TOT_020000877	mRNA	TOT_020000877	NC_025261.1	1929552	1929860	R	TOT_020000877	complement(join(<1929552..1929768,1929823..>1929860))	Theileria orientalis strain Shintoku	20714992
TOT_020000878	mRNA	TOT_020000878	NC_025261.1	1930182	1932240	D	TOT_020000878	join(<1930182..1930650,1930752..1930851,1930958..1931277,1931327..1931608,1931765..>1932240)	Theileria orientalis strain Shintoku	20714993
TOT_020000879	mRNA	TOT_020000879	NC_025261.1	1932672	1934932	D	TOT_020000879	join(<1932672..1934424,1934670..>1934932)	Theileria orientalis strain Shintoku	20714994
TOT_020000880	mRNA	TOT_020000880	NC_025261.1	1935308	1935976	D	TOT_020000880	join(<1935308..1935632,1935717..>1935976)	Theileria orientalis strain Shintoku	20714995
TOT_020000882	mRNA	TOT_020000882	NC_025261.1	1941059	1944349	D	TOT_020000882	<1941059..>1944349	Theileria orientalis strain Shintoku	20714996
TOT_020001095	mRNA	TOT_020001095	NC_025261.1	1944750	1945772	R	TOT_020001095	complement(join(<1944750..1945112,1945249..1945357,1945573..>1945772))	Theileria orientalis strain Shintoku	20715186
TOT_020000884	mRNA	TOT_020000884	NC_025261.1	1946131	1946393	D	TOT_020000884	join(<1946131..1946227,1946320..>1946393)	Theileria orientalis strain Shintoku	20714997
TOT_020000885	mRNA	TOT_020000885	NC_025261.1	1946486	1947854	D	TOT_020000885	join(<1946486..1947482,1947550..>1947854)	Theileria orientalis strain Shintoku	20714998
TOT_020000886	mRNA	TOT_020000886	NC_025261.1	1947878	1948045	D	TOT_020000886	<1947878..>1948045	Theileria orientalis strain Shintoku	20714999
TOT_020000887	mRNA	TOT_020000887	NC_025261.1	1948105	1952673	R	TOT_020000887	complement(join(<1948105..1949204,1949439..1950647,1950942..1951323,1951390..1952096,1952340..>1952673))	Theileria orientalis strain Shintoku	20715000
TOT_020000888	mRNA	TOT_020000888	NC_025261.1	1952703	1954336	R	TOT_020000888	complement(join(<1952703..1953289,1953335..1953941,1954118..>1954336))	Theileria orientalis strain Shintoku	20715001
TOT_020000889	mRNA	TOT_020000889	NC_025261.1	1954737	1959614	R	TOT_020000889	complement(join(<1954737..1955329,1955384..1955716,1955762..>1959614))	Theileria orientalis strain Shintoku	20715002
TOT_020001096	mRNA	TOT_020001096	NC_025261.1	1960328	1961026	D	TOT_020001096	join(<1960328..1960478,1960568..1960789,1960923..>1961026)	Theileria orientalis strain Shintoku	20715187
TOT_020000891	mRNA	TOT_020000891	NC_025261.1	1961320	1962864	R	TOT_020000891	complement(join(<1961320..1962079,1962161..>1962864))	Theileria orientalis strain Shintoku	20715003
TOT_020000892	mRNA	TOT_020000892	NC_025261.1	1964097	1964871	R	TOT_020000892	complement(join(<1964097..1964308,1964439..>1964871))	Theileria orientalis strain Shintoku	20715004
TOT_020000893	mRNA	TOT_020000893	NC_025261.1	1964935	1965434	R	TOT_020000893	complement(join(<1964935..1965109,1965170..1965275,1965386..>1965434))	Theileria orientalis strain Shintoku	20715005
TOT_020000894	mRNA	TOT_020000894	NC_025261.1	1966172	1967991	R	TOT_020000894	complement(join(<1966172..1966851,1966947..1967402,1967634..>1967991))	Theileria orientalis strain Shintoku	20715006
TOT_020000895	mRNA	TOT_020000895	NC_025261.1	1968737	1969403	D	TOT_020000895	join(<1968737..1968889,1969066..1969227,1969239..>1969403)	Theileria orientalis strain Shintoku	20715007
TOT_020000896	mRNA	TOT_020000896	NC_025261.1	1971395	1973766	R	TOT_020000896	complement(join(<1971395..1972263,1972683..1972838,1972929..>1973766))	Theileria orientalis strain Shintoku	20715008
TOT_020000897	mRNA	TOT_020000897	NC_025261.1	1973934	1974329	D	TOT_020000897	join(<1973934..1973947,1974170..>1974329)	Theileria orientalis strain Shintoku	20715009
TOT_020000898	mRNA	TOT_020000898	NC_025261.1	1975301	1976557	D	TOT_020000898	join(<1975301..1975500,1975585..1975867,1976168..>1976557)	Theileria orientalis strain Shintoku	20715010
TOT_020000899	mRNA	TOT_020000899	NC_025261.1	1977443	1979731	D	TOT_020000899	join(<1977443..1978690,1978781..1978923,1979059..>1979731)	Theileria orientalis strain Shintoku	20715011
TOT_020000900	mRNA	TOT_020000900	NC_025261.1	1980591	1983146	D	TOT_020000900	join(<1980591..1981349,1981419..>1983146)	Theileria orientalis strain Shintoku	20715012
TOT_020000901	mRNA	TOT_020000901	NC_025261.1	1983489	1985201	R	TOT_020000901	complement(<1983489..>1985201)	Theileria orientalis strain Shintoku	20715013
TOT_020000902	mRNA	TOT_020000902	NC_025261.1	1986171	1987553	R	TOT_020000902	complement(join(<1986171..1986261,1986295..1986440,1986494..1986677,1986721..1986841,1986905..1987015,1987046..1987159,1987325..>1987553))	Theileria orientalis strain Shintoku	20715014
TOT_020000903	mRNA	TOT_020000903	NC_025261.1	1988222	1988813	D	TOT_020000903	join(<1988222..1988441,1988575..>1988813)	Theileria orientalis strain Shintoku	20715015
TOT_020001097	mRNA	TOT_020001097	NC_025261.1	1989126	1989848	D	TOT_020001097	join(<1989126..1989378,1989463..1989534,1989622..>1989848)	Theileria orientalis strain Shintoku	20715188
TOT_020000905	mRNA	TOT_020000905	NC_025261.1	1990096	1990803	R	TOT_020000905	complement(<1990096..>1990803)	Theileria orientalis strain Shintoku	20715016
TOT_020001098	mRNA	TOT_020001098	NC_025261.1	1991763	2003170	R	TOT_020001098	complement(join(<1991763..1992050,1992360..1992454,1992598..1992934,1993068..1993302,1993704..1993814,1993893..1994068,1994117..1994265,1994469..1994686,1994969..1995144,1995349..1995770,1995857..1996026,1996158..1996620,1996830..1997020,1997081..1997480,1997632..1998123,1998269..1998817,1998860..1999308,1999417..1999643,1999728..2000397,2000695..2000937,2001199..2001414,2001565..2002015,2002174..2002863,2002945..>2003170))	Theileria orientalis strain Shintoku	20715189
TOT_020000907	mRNA	TOT_020000907	NC_025261.1	2003665	2005588	D	TOT_020000907	join(<2003665..2003746,2004205..2004374,2004462..2004662,2004735..2004946,2005016..2005229,2005335..2005498,2005540..>2005588)	Theileria orientalis strain Shintoku	20715017
TOT_020001099	mRNA	TOT_020001099	NC_025261.1	2005618	2006781	R	TOT_020001099	complement(join(<2005618..2006035,2006078..2006194,2006235..2006341,2006424..2006616,2006678..>2006781))	Theileria orientalis strain Shintoku	20715190
TOT_020000909	mRNA	TOT_020000909	NC_025261.1	2007363	2008443	D	TOT_020000909	join(<2007363..2007466,2007499..2007673,2007689..2007782,2007817..2007836,2008024..2008090,2008166..>2008443)	Theileria orientalis strain Shintoku	20715018
TOT_020000910	mRNA	TOT_020000910	NC_025261.1	2008500	2008767	R	TOT_020000910	complement(join(<2008500..2008688,2008717..>2008767))	Theileria orientalis strain Shintoku	20715019
TOT_020000911	mRNA	TOT_020000911	NC_025261.1	2008851	2013178	R	TOT_020000911	complement(join(<2008851..2009498,2009856..2009936,2009967..2010038,2010328..2010475,2010687..2010942,2011071..2011201,2011232..2011304,2011810..2012125,2012224..2012350,2012468..2012727,2012897..>2013178))	Theileria orientalis strain Shintoku	20715020
TOT_020000912	mRNA	TOT_020000912	NC_025261.1	2013619	2015874	D	TOT_020000912	join(<2013619..2014359,2014441..2015044,2015115..2015362,2015541..2015659,2015793..>2015874)	Theileria orientalis strain Shintoku	20715021
TOT_020000913	mRNA	TOT_020000913	NC_025261.1	2015896	2016045	R	TOT_020000913	complement(<2015896..>2016045)	Theileria orientalis strain Shintoku	20715022
TOT_020000914	mRNA	TOT_020000914	NC_025261.1	2016386	2017024	D	TOT_020000914	<2016386..>2017024	Theileria orientalis strain Shintoku	20715023
TOT_020000915	mRNA	TOT_020000915	NC_025261.1	2017436	2018407	D	TOT_020000915	<2017436..>2018407	Theileria orientalis strain Shintoku	20715024
TOT_020000916	mRNA	TOT_020000916	NC_025261.1	2019858	2021137	D	TOT_020000916	join(<2019858..2021036,2021048..>2021137)	Theileria orientalis strain Shintoku	20715025
TOT_020000917	mRNA	TOT_020000917	NC_025261.1	2021322	2025769	D	TOT_020000917	join(<2021322..2022613,2022718..>2025769)	Theileria orientalis strain Shintoku	20715026
TOT_020000918	mRNA	TOT_020000918	NC_025261.1	2025931	2031516	R	TOT_020000918	complement(join(<2025931..2027327,2027451..2027715,2027776..2028259,2028308..2029703,2029797..2029964,2030016..2030880,2031001..>2031516))	Theileria orientalis strain Shintoku	20715027
TOT_020000919	mRNA	TOT_020000919	NC_025261.1	2032085	2035846	R	TOT_020000919	complement(join(<2032085..2032189,2032247..2032402,2032471..2032580,2032779..2032833,2032996..2033707,2033780..2033910,2034017..2034334,2034804..2035454,2035534..2035650,2035736..>2035846))	Theileria orientalis strain Shintoku	20715028
TOT_020000920	mRNA	TOT_020000920	NC_025261.1	2036369	2037605	D	TOT_020000920	join(<2036369..2036861,2036926..>2037605)	Theileria orientalis strain Shintoku	20715029
TOT_020000921	mRNA	TOT_020000921	NC_025261.1	2038321	2039643	D	TOT_020000921	<2038321..>2039643	Theileria orientalis strain Shintoku	20715030
TOT_020001100	mRNA	TOT_020001100	NC_025261.1	2040010	2045570	R	TOT_020001100	complement(join(<2040010..2041355,2041589..2041699,2041796..2042203,2042246..2042645,2042730..2042914,2043032..2043280,2043416..2043785,2043993..2044325,2044386..>2045570))	Theileria orientalis strain Shintoku	20715191
TOT_020000923	mRNA	TOT_020000923	NC_025261.1	2046264	2046407	R	TOT_020000923	complement(<2046264..>2046407)	Theileria orientalis strain Shintoku	20715031
TOT_020000924	mRNA	TOT_020000924	NC_025261.1	2046674	2047948	D	TOT_020000924	<2046674..>2047948	Theileria orientalis strain Shintoku	20715032
TOT_020000925	mRNA	TOT_020000925	NC_025261.1	2048077	2052000	R	TOT_020000925	complement(join(<2048077..2048561,2049135..2049572,2049642..2050460,2050575..2051783,2051850..2051876,2051940..>2052000))	Theileria orientalis strain Shintoku	20715033
TOT_020000926	mRNA	TOT_020000926	NC_025261.1	2052697	2058912	D	TOT_020000926	join(<2052697..2054354,2054430..2054727,2054839..2054971,2055203..2055485,2055591..2056121,2056380..2057769,2058097..>2058912)	Theileria orientalis strain Shintoku	20715034
TOT_020000927	mRNA	TOT_020000927	NC_025261.1	2059356	2060094	D	TOT_020000927	join(<2059356..2059649,2059747..>2060094)	Theileria orientalis strain Shintoku	20715035
TOT_020000928	mRNA	TOT_020000928	NC_025261.1	2060142	2061385	R	TOT_020000928	complement(join(<2060142..2060180,2060190..2060294,2060387..2060938,2060949..2061124,2061193..2061266,2061309..>2061385))	Theileria orientalis strain Shintoku	20715036
TOT_020001101	mRNA	TOT_020001101	NC_025261.1	2061668	2064604	D	TOT_020001101	join(<2061668..2061983,2062015..2062049,2062092..2062533,2063353..2063582,2063628..2064002,2064332..>2064604)	Theileria orientalis strain Shintoku	20715192
TOT_020001102	mRNA	TOT_020001102	NC_025261.1	2065142	2066272	R	TOT_020001102	complement(<2065142..>2066272)	Theileria orientalis strain Shintoku	20715193
TOT_020000931	mRNA	TOT_020000931	NC_025261.1	2066649	2066759	D	TOT_020000931	<2066649..>2066759	Theileria orientalis strain Shintoku	20715037
TOT_020000932	mRNA	TOT_020000932	NC_025261.1	2067979	2069541	D	TOT_020000932	join(<2067979..2068513,2068661..2068979,2069079..2069142,2069215..>2069541)	Theileria orientalis strain Shintoku	20715038
TOT_020000933	mRNA	TOT_020000933	NC_025261.1	2069762	2072573	R	TOT_020000933	complement(join(<2069762..2070087,2070113..2070255,2070285..2070366,2070502..2070592,2070625..2070638,2070669..2070798,2070838..2071002,2071041..2071150,2071183..2071381,2071415..2071576,2071614..2072200,2072229..2072366,2072402..>2072573))	Theileria orientalis strain Shintoku	20715039
TOT_020000934	mRNA	TOT_020000934	NC_025261.1	2072871	2075213	R	TOT_020000934	complement(join(<2072871..2073677,2073714..>2075213))	Theileria orientalis strain Shintoku	20715040
TOT_020000935	mRNA	TOT_020000935	NC_025261.1	2075814	2076697	R	TOT_020000935	complement(join(<2075814..2076455,2076488..>2076697))	Theileria orientalis strain Shintoku	20715041
TOT_020000936	mRNA	TOT_020000936	NC_025261.1	2077382	2078239	D	TOT_020000936	<2077382..>2078239	Theileria orientalis strain Shintoku	20715042
TOT_020000937	mRNA	TOT_020000937	NC_025261.1	2079069	2080257	D	TOT_020000937	join(<2079069..2079599,2079610..>2080257)	Theileria orientalis strain Shintoku	20715043
TOT_020000938	mRNA	TOT_020000938	NC_025261.1	2080522	2083420	R	TOT_020000938	complement(join(<2080522..2081541,2081855..2081983,2082095..>2083420))	Theileria orientalis strain Shintoku	20715044
TOT_020000939	mRNA	TOT_020000939	NC_025261.1	2083534	2084086	R	TOT_020000939	complement(join(<2083534..2083665,2083723..2083795,2083826..2083880,2083917..2083981,2084046..>2084086))	Theileria orientalis strain Shintoku	20715045
TOT_020000940	mRNA	TOT_020000940	NC_025261.1	2085197	2090686	D	TOT_020000940	join(<2085197..2085708,2085725..2085800,2085825..2086352,2086504..2086723,2087205..2087330,2087426..2088251,2088375..2090486,2090602..>2090686)	Theileria orientalis strain Shintoku	20715046
TOT_020000941	mRNA	TOT_020000941	NC_025261.1	2090713	2092775	R	TOT_020000941	complement(join(<2090713..2091361,2091422..2092713,2092752..>2092775))	Theileria orientalis strain Shintoku	20715047
TOT_020000942	mRNA	TOT_020000942	NC_025261.1	2093566	2094660	D	TOT_020000942	join(<2093566..2094456,2094559..>2094660)	Theileria orientalis strain Shintoku	20715048
TOT_020000943	mRNA	TOT_020000943	NC_025261.1	2095217	2100979	D	TOT_020000943	join(<2095217..2100543,2100916..>2100979)	Theileria orientalis strain Shintoku	20715049
TOT_020000944	mRNA	TOT_020000944	NC_025261.1	2101105	2102210	D	TOT_020000944	join(<2101105..2101356,2101387..2101730,2102027..>2102210)	Theileria orientalis strain Shintoku	20715050
TOT_020000945	mRNA	TOT_020000945	NC_025261.1	2102243	2102636	D	TOT_020000945	join(<2102243..2102433,2102439..2102511,2102517..>2102636)	Theileria orientalis strain Shintoku	20715051
TOT_020000946	mRNA	TOT_020000946	NC_025261.1	2102712	2103049	R	TOT_020000946	complement(join(<2102712..2102785,2102956..>2103049))	Theileria orientalis strain Shintoku	20715052
TOT_020000947	mRNA	TOT_020000947	NC_025261.1	2103689	2104354	D	TOT_020000947	<2103689..>2104354	Theileria orientalis strain Shintoku	20715053
TOT_020000948	mRNA	TOT_020000948	NC_025261.1	2104446	2107226	D	TOT_020000948	join(<2104446..2105092,2105270..2106104,2106378..>2107226)	Theileria orientalis strain Shintoku	20715054
TOT_020000949	mRNA	TOT_020000949	NC_025261.1	2107497	2108102	D	TOT_020000949	<2107497..>2108102	Theileria orientalis strain Shintoku	20715055
TOT_020000950	mRNA	TOT_020000950	NC_025261.1	2108109	2111003	D	TOT_020000950	join(<2108109..2109814,2109956..2110195,2110370..2110520,2110578..>2111003)	Theileria orientalis strain Shintoku	20715056
TOT_020000951	mRNA	TOT_020000951	NC_025261.1	2111518	2113377	R	TOT_020000951	complement(<2111518..>2113377)	Theileria orientalis strain Shintoku	20715057
TOT_020000952	mRNA	TOT_020000952	NC_025261.1	2113766	2115258	D	TOT_020000952	join(<2113766..2114152,2114241..2114471,2114504..2114626,2114659..>2115258)	Theileria orientalis strain Shintoku	20715058
TOT_020001103	mRNA	TOT_020001103	NC_025261.1	2115713	2116793	D	TOT_020001103	join(<2115713..2115844,2115966..2116176,2116212..2116342,2116424..2116563,2116618..2116711,2116746..>2116793)	Theileria orientalis strain Shintoku	20715194
TOT_020000954	mRNA	TOT_020000954	NC_025261.1	2116898	2118416	D	TOT_020000954	join(<2116898..2117281,2117352..2117582,2117615..2117740,2117772..2118093,2118142..>2118416)	Theileria orientalis strain Shintoku	20715059
TOT_020000955	mRNA	TOT_020000955	NC_025261.1	2118893	2120402	D	TOT_020000955	join(<2118893..2119200,2119457..2119616,2119649..2119771,2119803..>2120402)	Theileria orientalis strain Shintoku	20715060
TOT_020000956	mRNA	TOT_020000956	NC_025261.1	2120857	2121906	D	TOT_020000956	join(<2120857..2120988,2121110..2121320,2121356..2121486,2121568..2121707,2121762..>2121906)	Theileria orientalis strain Shintoku	20715061
TOT_020000957	mRNA	TOT_020000957	NC_025261.1	2122042	2123560	D	TOT_020000957	join(<2122042..2122425,2122496..2122726,2122759..2122884,2122916..2123237,2123286..>2123560)	Theileria orientalis strain Shintoku	20715062
TOT_020000958	mRNA	TOT_020000958	NC_025261.1	2123622	2125044	D	TOT_020000958	join(<2123622..2123712,2123744..2124356,2124388..2124574,2124606..2124913,2124972..>2125044)	Theileria orientalis strain Shintoku	20715063
TOT_020000959	mRNA	TOT_020000959	NC_025261.1	2125518	2125979	D	TOT_020000959	<2125518..>2125979	Theileria orientalis strain Shintoku	20715064
TOT_020000960	mRNA	TOT_020000960	NC_025261.1	2126031	2129399	R	TOT_020000960	complement(join(<2126031..2126300,2126396..2126979,2127079..2129250,2129291..>2129399))	Theileria orientalis strain Shintoku	20715065
TOT_020001104	mRNA	TOT_020001104	NC_025261.1	2130083	2130532	D	TOT_020001104	join(<2130083..2130398,2130441..>2130532)	Theileria orientalis strain Shintoku	20715195
TOT_020001105	mRNA	TOT_020001105	NC_025261.1	2130702	2133534	D	TOT_020001105	join(<2130702..2130728,2130763..2130904,2131003..2132162,2132322..2132507,2132589..2132925,2133092..>2133534)	Theileria orientalis strain Shintoku	20715196
TOT_020000963	mRNA	TOT_020000963	NC_025261.1	2133844	2135691	R	TOT_020000963	complement(join(<2133844..2133974,2134125..>2135691))	Theileria orientalis strain Shintoku	20715066
TOT_020000964	mRNA	TOT_020000964	NC_025261.1	2136673	2139423	D	TOT_020000964	join(<2136673..2136755,2136916..2138719,2138950..>2139423)	Theileria orientalis strain Shintoku	20715067
TOT_020000965	mRNA	TOT_020000965	NC_025261.1	2139867	2140745	R	TOT_020000965	complement(<2139867..>2140745)	Theileria orientalis strain Shintoku	20715068
TOT_020000966	mRNA	TOT_020000966	NC_025261.1	2141132	2142895	D	TOT_020000966	join(<2141132..2142430,2142563..>2142895)	Theileria orientalis strain Shintoku	20715069
TOT_020000967	mRNA	TOT_020000967	NC_025261.1	2143711	2158969	D	TOT_020000967	join(<2143711..2145784,2146095..2148534,2148755..2149209,2149297..2150888,2150943..2151094,2151128..2152014,2152292..2155930,2156079..2156673,2156809..2157103,2157338..>2158969)	Theileria orientalis strain Shintoku	20715070
TOT_020000969	mRNA	TOT_020000969	NC_025261.1	2159303	2160559	R	TOT_020000969	complement(join(<2159303..2160261,2160556..>2160559))	Theileria orientalis strain Shintoku	20715071
TOT_020000970	mRNA	TOT_020000970	NC_025261.1	2161232	2165770	D	TOT_020000970	<2161232..>2165770	Theileria orientalis strain Shintoku	20715072
TOT_020001106	mRNA	TOT_020001106	NC_025261.1	2166410	2169140	D	TOT_020001106	join(<2166410..2167421,2167453..2167543,2167577..2167745,2167775..2167944,2167974..2168133,2168265..2168339,2168370..2168435,2168478..2168583,2168615..2168738,2168770..2168890,2169000..>2169140)	Theileria orientalis strain Shintoku	20715197
TOT_020001107	mRNA	TOT_020001107	NC_025261.1	2169178	2170627	R	TOT_020001107	complement(join(<2169178..2170127,2170213..>2170627))	Theileria orientalis strain Shintoku	20715198
TOT_020000973	mRNA	TOT_020000973	NC_025261.1	2171065	2173356	R	TOT_020000973	complement(<2171065..>2173356)	Theileria orientalis strain Shintoku	20715073
TOT_020000974	mRNA	TOT_020000974	NC_025261.1	2174083	2175912	R	TOT_020000974	complement(join(<2174083..2174191,2174239..2174960,2174991..2175062,2175093..2175166,2175196..2175405,2175436..2175552,2175636..>2175912))	Theileria orientalis strain Shintoku	20715074
TOT_020000975	mRNA	TOT_020000975	NC_025261.1	2176198	2176311	R	TOT_020000975	complement(<2176198..>2176311)	Theileria orientalis strain Shintoku	20715075
TOT_020000976	mRNA	TOT_020000976	NC_025261.1	2176531	2177479	D	TOT_020000976	join(<2176531..2176581,2176680..2176796,2176833..2176940,2176976..2177073,2177118..2177239,2177327..2177391,2177423..>2177479)	Theileria orientalis strain Shintoku	20715076
TOT_020001108	mRNA	TOT_020001108	NC_025261.1	2177584	2178065	D	TOT_020001108	join(<2177584..2177743,2177812..>2178065)	Theileria orientalis strain Shintoku	20715199
TOT_020000978	mRNA	TOT_020000978	NC_025261.1	2178211	2179359	R	TOT_020000978	complement(join(<2178211..2178296,2178338..2178470,2178512..2178592,2178622..2178792,2178824..2178904,2178947..2179052,2179088..2179132,2179166..>2179359))	Theileria orientalis strain Shintoku	20715077
TOT_020000979	mRNA	TOT_020000979	NC_025261.1	2179915	2180633	D	TOT_020000979	join(<2179915..2180125,2180246..2180398,2180431..>2180633)	Theileria orientalis strain Shintoku	20715078
TOT_020000980	mRNA	TOT_020000980	NC_025261.1	2181104	2183289	D	TOT_020000980	join(<2181104..2182395,2182533..>2183289)	Theileria orientalis strain Shintoku	20715079
TOT_020000981	mRNA	TOT_020000981	NC_025261.1	2184289	2186379	D	TOT_020000981	<2184289..>2186379	Theileria orientalis strain Shintoku	20715080
TOT_020000982	mRNA	TOT_020000982	NC_025261.1	2186402	2186803	R	TOT_020000982	complement(join(<2186402..2186639,2186664..>2186803))	Theileria orientalis strain Shintoku	20715081
TOT_020000983	mRNA	TOT_020000983	NC_025261.1	2188105	2189393	D	TOT_020000983	join(<2188105..2188270,2188301..2188355,2188408..2188489,2188623..2188658,2188739..2188830,2188946..2189039,2189156..2189263,2189331..>2189393)	Theileria orientalis strain Shintoku	20715082
TOT_020001109	mRNA	TOT_020001109	NC_025261.1	2189592	2190260	R	TOT_020001109	complement(<2189592..>2190260)	Theileria orientalis strain Shintoku	20715200
TOT_020000985	mRNA	TOT_020000985	NC_025261.1	2197028	2201596	D	TOT_020000985	<2197028..>2201596	Theileria orientalis strain Shintoku	20715083
TOT_020000986	mRNA	TOT_020000986	NC_025261.1	2201965	2208994	R	TOT_020000986	complement(join(<2201965..2203380,2205174..2205506,2206283..>2208994))	Theileria orientalis strain Shintoku	20715084
TOT_020000987	mRNA	TOT_020000987	NC_025261.1	2210291	2210536	D	TOT_020000987	<2210291..>2210536	Theileria orientalis strain Shintoku	20715085
TOT_020000988	mRNA	TOT_020000988	NC_025261.1	2210538	2212853	R	TOT_020000988	complement(<2210538..>2212853)	Theileria orientalis strain Shintoku	20715086
TOT_020000989	mRNA	TOT_020000989	NC_025261.1	2212895	2213062	D	TOT_020000989	<2212895..>2213062	Theileria orientalis strain Shintoku	20715087
TOT_020000990	mRNA	TOT_020000990	NC_025261.1	2213266	2214212	R	TOT_020000990	complement(join(<2213266..2213491,2213763..2213976,2214137..>2214212))	Theileria orientalis strain Shintoku	20715088
TOT_020000991	mRNA	TOT_020000991	NC_025261.1	2214525	2215261	R	TOT_020000991	complement(join(<2214525..2214575,2214636..2214946,2215225..>2215261))	Theileria orientalis strain Shintoku	20715089
TOT_020000992	mRNA	TOT_020000992	NC_025261.1	2215299	2216619	D	TOT_020000992	join(<2215299..2215373,2215516..2215626,2215645..2215959,2216107..>2216619)	Theileria orientalis strain Shintoku	20715090
TOT_020000993	mRNA	TOT_020000993	NC_025261.1	2216632	2216757	D	TOT_020000993	<2216632..>2216757	Theileria orientalis strain Shintoku	20715091
TOT_030000001	mRNA	TOT_030000001	NC_025262.1	445	630	R	TOT_030000001	complement(<445..>630)	Theileria orientalis strain Shintoku	20715213
TOT_030000002	mRNA	TOT_030000002	NC_025262.1	637	1890	R	TOT_030000002	complement(join(<637..703,752..1062,1210..1524,1543..1653,1816..>1890))	Theileria orientalis strain Shintoku	20715214
TOT_030000003	mRNA	TOT_030000003	NC_025262.1	1910	2594	R	TOT_030000003	complement(join(<1910..2077,2231..2379,2456..>2594))	Theileria orientalis strain Shintoku	20715215
TOT_030000004	mRNA	TOT_030000004	NC_025262.1	3050	3208	D	TOT_030000004	<3050..>3208	Theileria orientalis strain Shintoku	20715216
TOT_030000005	mRNA	TOT_030000005	NC_025262.1	3288	3491	D	TOT_030000005	<3288..>3491	Theileria orientalis strain Shintoku	20715217
TOT_030000006	mRNA	TOT_030000006	NC_025262.1	3763	3936	D	TOT_030000006	<3763..>3936	Theileria orientalis strain Shintoku	20715218
TOT_030000007	mRNA	TOT_030000007	NC_025262.1	4216	4416	R	TOT_030000007	complement(<4216..>4416)	Theileria orientalis strain Shintoku	20715219
TOT_030000008	mRNA	TOT_030000008	NC_025262.1	4425	6959	D	TOT_030000008	<4425..>6959	Theileria orientalis strain Shintoku	20715220
TOT_030000889	mRNA	TOT_030000889	NC_025262.1	8498	17947	D	TOT_030000889	join(<8498..9156,14575..>17947)	Theileria orientalis strain Shintoku	20716026
TOT_030000010	mRNA	TOT_030000010	NC_025262.1	17974	18865	R	TOT_030000010	complement(join(<17974..18149,18237..18453,18860..>18865))	Theileria orientalis strain Shintoku	20715221
TOT_030000011	mRNA	TOT_030000011	NC_025262.1	18868	23424	R	TOT_030000011	complement(<18868..>23424)	Theileria orientalis strain Shintoku	20715222
TOT_030000012	mRNA	TOT_030000012	NC_025262.1	25663	30948	R	TOT_030000012	complement(join(<25663..29643,29659..>30948))	Theileria orientalis strain Shintoku	20715223
TOT_030000013	mRNA	TOT_030000013	NC_025262.1	32269	37553	R	TOT_030000013	complement(join(<32269..37171,37459..>37553))	Theileria orientalis strain Shintoku	20715224
TOT_030000014	mRNA	TOT_030000014	NC_025262.1	38088	41036	R	TOT_030000014	complement(<38088..>41036)	Theileria orientalis strain Shintoku	20715225
TOT_030000015	mRNA	TOT_030000015	NC_025262.1	41347	46678	R	TOT_030000015	complement(join(<41347..41424,41451..41591,42371..>46678))	Theileria orientalis strain Shintoku	20715226
TOT_030000016	mRNA	TOT_030000016	NC_025262.1	47553	50269	R	TOT_030000016	complement(join(<47553..50022,50137..50164,50176..>50269))	Theileria orientalis strain Shintoku	20715227
TOT_030000017	mRNA	TOT_030000017	NC_025262.1	50340	55084	R	TOT_030000017	complement(join(<50340..50428,50483..50603,50614..50742,50780..50899,51059..>55084))	Theileria orientalis strain Shintoku	20715228
TOT_030000890	mRNA	TOT_030000890	NC_025262.1	56880	61532	D	TOT_030000890	<56880..>61532	Theileria orientalis strain Shintoku	20716027
TOT_030000019	mRNA	TOT_030000019	NC_025262.1	61758	61916	R	TOT_030000019	complement(<61758..>61916)	Theileria orientalis strain Shintoku	20715229
TOT_030000020	mRNA	TOT_030000020	NC_025262.1	61984	65886	D	TOT_030000020	<61984..>65886	Theileria orientalis strain Shintoku	20715230
TOT_030000021	mRNA	TOT_030000021	NC_025262.1	66295	67112	R	TOT_030000021	complement(join(<66295..66433,66465..66698,66814..66950,67041..>67112))	Theileria orientalis strain Shintoku	20715231
TOT_030000891	mRNA	TOT_030000891	NC_025262.1	67848	68601	D	TOT_030000891	join(<67848..67947,67986..68095,68221..>68601)	Theileria orientalis strain Shintoku	20716028
TOT_030000892	mRNA	TOT_030000892	NC_025262.1	68782	69834	D	TOT_030000892	join(<68782..68817,68859..68936,68965..69147,69201..69240,69270..69325,69357..69462,69518..69686,69753..>69834)	Theileria orientalis strain Shintoku	20716029
TOT_030000893	mRNA	TOT_030000893	NC_025262.1	69998	70594	D	TOT_030000893	join(<69998..70121,70162..70207,70293..70461,70496..>70594)	Theileria orientalis strain Shintoku	20716030
TOT_030000025	mRNA	TOT_030000025	NC_025262.1	70751	72143	R	TOT_030000025	complement(join(<70751..70945,70984..71082,71133..71218,71248..71465,71523..71594,71701..71806,71828..71926,71975..>72143))	Theileria orientalis strain Shintoku	20715232
TOT_030000026	mRNA	TOT_030000026	NC_025262.1	72983	74560	D	TOT_030000026	<72983..>74560	Theileria orientalis strain Shintoku	20715233
TOT_030000027	mRNA	TOT_030000027	NC_025262.1	74830	75381	D	TOT_030000027	join(<74830..75106,75185..>75381)	Theileria orientalis strain Shintoku	20715234
TOT_030000028	mRNA	TOT_030000028	NC_025262.1	75585	76294	D	TOT_030000028	join(<75585..75672,75730..75821,75867..76024,76063..>76294)	Theileria orientalis strain Shintoku	20715235
TOT_030000029	mRNA	TOT_030000029	NC_025262.1	76359	77097	R	TOT_030000029	complement(join(<76359..77033,77095..>77097))	Theileria orientalis strain Shintoku	20715236
TOT_030000030	mRNA	TOT_030000030	NC_025262.1	77267	78979	D	TOT_030000030	join(<77267..77279,77404..77471,77508..77787,77881..78769,78799..>78979)	Theileria orientalis strain Shintoku	20715237
TOT_030000894	mRNA	TOT_030000894	NC_025262.1	79005	79689	R	TOT_030000894	complement(join(<79005..79150,79168..79283,79313..79399,79429..79581,79616..>79689))	Theileria orientalis strain Shintoku	20716031
TOT_030000032	mRNA	TOT_030000032	NC_025262.1	79994	80825	D	TOT_030000032	join(<79994..80141,80171..80236,80254..80421,80452..80550,80581..80676,80707..>80825)	Theileria orientalis strain Shintoku	20715238
TOT_030000033	mRNA	TOT_030000033	NC_025262.1	81486	83285	D	TOT_030000033	join(<81486..82553,82713..>83285)	Theileria orientalis strain Shintoku	20715239
TOT_030000034	mRNA	TOT_030000034	NC_025262.1	83673	86198	D	TOT_030000034	<83673..>86198	Theileria orientalis strain Shintoku	20715240
TOT_030000035	mRNA	TOT_030000035	NC_025262.1	86614	88200	R	TOT_030000035	complement(<86614..>88200)	Theileria orientalis strain Shintoku	20715241
TOT_030000036	mRNA	TOT_030000036	NC_025262.1	88768	93858	R	TOT_030000036	complement(<88768..>93858)	Theileria orientalis strain Shintoku	20715242
TOT_030000037	mRNA	TOT_030000037	NC_025262.1	94306	95441	R	TOT_030000037	complement(join(<94306..94315,94407..94775,94845..95032,95067..>95441))	Theileria orientalis strain Shintoku	20715243
TOT_030000038	mRNA	TOT_030000038	NC_025262.1	98056	99460	R	TOT_030000038	complement(join(<98056..98756,98787..98987,99022..>99460))	Theileria orientalis strain Shintoku	20715244
TOT_030000039	mRNA	TOT_030000039	NC_025262.1	100048	100550	R	TOT_030000039	complement(join(<100048..100259,100336..100423,100512..>100550))	Theileria orientalis strain Shintoku	20715245
TOT_030000040	mRNA	TOT_030000040	NC_025262.1	100630	101742	R	TOT_030000040	complement(join(<100630..100800,100992..101121,101173..101425,101532..>101742))	Theileria orientalis strain Shintoku	20715246
TOT_030000041	mRNA	TOT_030000041	NC_025262.1	102637	103168	D	TOT_030000041	join(<102637..102717,102753..102811,102893..102916,102950..103021,103054..>103168)	Theileria orientalis strain Shintoku	20715247
TOT_030000042	mRNA	TOT_030000042	NC_025262.1	103463	104301	D	TOT_030000042	join(<103463..103615,103652..103713,103783..103899,103942..104065,104160..104241,104279..>104301)	Theileria orientalis strain Shintoku	20715248
TOT_030000043	mRNA	TOT_030000043	NC_025262.1	104542	106138	D	TOT_030000043	join(<104542..104634,104732..104851,104958..105109,105148..>106138)	Theileria orientalis strain Shintoku	20715249
TOT_030000044	mRNA	TOT_030000044	NC_025262.1	106130	106302	R	TOT_030000044	complement(join(<106130..106195,106249..>106302))	Theileria orientalis strain Shintoku	20715250
TOT_030000045	mRNA	TOT_030000045	NC_025262.1	107042	108200	D	TOT_030000045	join(<107042..107214,107254..107330,107372..107463,107510..107686,107958..>108200)	Theileria orientalis strain Shintoku	20715251
TOT_030000046	mRNA	TOT_030000046	NC_025262.1	108609	110280	D	TOT_030000046	join(<108609..108613,108792..109325,109356..109455,109520..110095,110149..>110280)	Theileria orientalis strain Shintoku	20715252
TOT_030000047	mRNA	TOT_030000047	NC_025262.1	110587	111384	D	TOT_030000047	<110587..>111384	Theileria orientalis strain Shintoku	20715253
TOT_030000048	mRNA	TOT_030000048	NC_025262.1	111393	115208	R	TOT_030000048	complement(join(<111393..111902,111945..112382,112493..112552,112587..112912,112965..113222,113254..113530,113561..113797,113828..114144,114210..114500,114531..114758,114790..114900,114935..>115208))	Theileria orientalis strain Shintoku	20715254
TOT_030000049	mRNA	TOT_030000049	NC_025262.1	115629	116927	D	TOT_030000049	join(<115629..115850,115924..116432,116528..>116927)	Theileria orientalis strain Shintoku	20715255
TOT_030000050	mRNA	TOT_030000050	NC_025262.1	117229	119304	R	TOT_030000050	complement(<117229..>119304)	Theileria orientalis strain Shintoku	20715256
TOT_030000051	mRNA	TOT_030000051	NC_025262.1	120354	120713	R	TOT_030000051	complement(join(<120354..120369,120462..120539,120610..>120713))	Theileria orientalis strain Shintoku	20715257
TOT_030000052	mRNA	TOT_030000052	NC_025262.1	120971	121510	R	TOT_030000052	complement(join(<120971..121094,121377..>121510))	Theileria orientalis strain Shintoku	20715258
TOT_030000053	mRNA	TOT_030000053	NC_025262.1	121539	122210	D	TOT_030000053	join(<121539..121697,121762..121899,121980..>122210)	Theileria orientalis strain Shintoku	20715259
TOT_030000054	mRNA	TOT_030000054	NC_025262.1	122604	124662	D	TOT_030000054	join(<122604..123018,123052..123369,123429..124314,124494..>124662)	Theileria orientalis strain Shintoku	20715260
TOT_030000055	mRNA	TOT_030000055	NC_025262.1	124973	128273	R	TOT_030000055	complement(join(<124973..127254,127286..127595,127638..127761,127881..127993,128091..>128273))	Theileria orientalis strain Shintoku	20715261
TOT_030000056	mRNA	TOT_030000056	NC_025262.1	128544	130781	R	TOT_030000056	complement(<128544..>130781)	Theileria orientalis strain Shintoku	20715262
TOT_030000057	mRNA	TOT_030000057	NC_025262.1	131755	133913	D	TOT_030000057	join(<131755..131775,131880..132545,132630..>133913)	Theileria orientalis strain Shintoku	20715263
TOT_030000058	mRNA	TOT_030000058	NC_025262.1	134132	136505	R	TOT_030000058	complement(join(<134132..134547,134633..134990,135098..135650,135735..136336,136452..>136505))	Theileria orientalis strain Shintoku	20715264
TOT_030000059	mRNA	TOT_030000059	NC_025262.1	136926	137925	R	TOT_030000059	complement(join(<136926..137224,137268..>137925))	Theileria orientalis strain Shintoku	20715265
TOT_030000060	mRNA	TOT_030000060	NC_025262.1	138360	140558	D	TOT_030000060	join(<138360..138438,138659..138909,138940..139020,139072..139415,139516..139666,139728..139846,140027..140094,140126..140173,140231..140303,140420..>140558)	Theileria orientalis strain Shintoku	20715266
TOT_030000061	mRNA	TOT_030000061	NC_025262.1	140666	142079	R	TOT_030000061	complement(join(<140666..140799,141059..141201,141315..141393,141426..141483,141514..141582,141617..141722,141798..141917,142009..>142079))	Theileria orientalis strain Shintoku	20715267
TOT_030000062	mRNA	TOT_030000062	NC_025262.1	142236	144421	R	TOT_030000062	complement(join(<142236..142827,142861..143105,143179..143267,143328..143453,143553..143619,143656..143693,143928..144077,144142..>144421))	Theileria orientalis strain Shintoku	20715268
TOT_030000063	mRNA	TOT_030000063	NC_025262.1	144861	146279	D	TOT_030000063	join(<144861..145151,145380..145679,145755..>146279)	Theileria orientalis strain Shintoku	20715269
TOT_030000064	mRNA	TOT_030000064	NC_025262.1	146532	149123	D	TOT_030000064	join(<146532..147989,148063..148452,148517..148921,149019..>149123)	Theileria orientalis strain Shintoku	20715270
TOT_030000065	mRNA	TOT_030000065	NC_025262.1	149287	153027	D	TOT_030000065	join(<149287..149407,149462..149601,149663..149776,149812..149873,149906..149961,150013..150116,150174..150369,150494..150531,150613..150716,150770..150857,150898..150973,151014..151100,151152..151241,151283..151326,151404..151487,151551..151625,151658..151714,151971..152042,152150..152350,152507..152599,152664..152747,152815..>153027)	Theileria orientalis strain Shintoku	20715271
TOT_030000066	mRNA	TOT_030000066	NC_025262.1	153069	153422	R	TOT_030000066	complement(join(<153069..153110,153153..>153422))	Theileria orientalis strain Shintoku	20715272
TOT_030000067	mRNA	TOT_030000067	NC_025262.1	154206	156254	R	TOT_030000067	complement(<154206..>156254)	Theileria orientalis strain Shintoku	20715273
TOT_030000068	mRNA	TOT_030000068	NC_025262.1	156633	157812	D	TOT_030000068	join(<156633..156765,156796..156989,157020..157222,157254..157435,157466..>157812)	Theileria orientalis strain Shintoku	20715274
TOT_030000069	mRNA	TOT_030000069	NC_025262.1	158009	158922	D	TOT_030000069	join(<158009..158120,158228..158397,158464..158597,158628..>158922)	Theileria orientalis strain Shintoku	20715275
TOT_030000070	mRNA	TOT_030000070	NC_025262.1	159089	161114	D	TOT_030000070	join(<159089..159179,159217..159305,159365..159517,159583..159675,159713..159877,159916..159974,160079..160193,160258..160341,160440..160596,160939..>161114)	Theileria orientalis strain Shintoku	20715276
TOT_030000895	mRNA	TOT_030000895	NC_025262.1	161180	161446	R	TOT_030000895	complement(<161180..>161446)	Theileria orientalis strain Shintoku	20716032
TOT_030000072	mRNA	TOT_030000072	NC_025262.1	161568	163653	D	TOT_030000072	join(<161568..161680,161715..161793,161878..161944,162065..162168,162201..162338,162560..162589,162625..162754,162796..162879,162913..163185,163281..163496,163532..>163653)	Theileria orientalis strain Shintoku	20715277
TOT_030000073	mRNA	TOT_030000073	NC_025262.1	163747	164370	R	TOT_030000073	complement(join(<163747..164147,164220..>164370))	Theileria orientalis strain Shintoku	20715278
TOT_030000074	mRNA	TOT_030000074	NC_025262.1	164583	165359	R	TOT_030000074	complement(<164583..>165359)	Theileria orientalis strain Shintoku	20715279
TOT_030000075	mRNA	TOT_030000075	NC_025262.1	165418	166858	R	TOT_030000075	complement(join(<165418..165624,165710..165797,165840..165994,166026..166140,166173..166239,166324..>166858))	Theileria orientalis strain Shintoku	20715280
TOT_030000076	mRNA	TOT_030000076	NC_025262.1	166917	171915	R	TOT_030000076	complement(join(<166917..166939,166970..167335,167370..167554,167588..167799,167857..168056,168088..168132,168163..168251,168448..168565,168597..168672,168729..168814,168860..168947,168980..169103,169135..169286,169349..169770,169806..170220,170305..170435,170465..170517,170758..171091,171123..171277,171337..171533,171608..171807,171909..>171915))	Theileria orientalis strain Shintoku	20715281
TOT_030000077	mRNA	TOT_030000077	NC_025262.1	173361	174323	D	TOT_030000077	<173361..>174323	Theileria orientalis strain Shintoku	20715282
TOT_030000896	mRNA	TOT_030000896	NC_025262.1	175831	177292	R	TOT_030000896	complement(join(<175831..176006,176060..176215,176247..176328,176362..176439,176495..176543,176576..176634,176716..176871,176908..177111,177203..>177292))	Theileria orientalis strain Shintoku	20716033
TOT_030000079	mRNA	TOT_030000079	NC_025262.1	177477	180135	D	TOT_030000079	join(<177477..178144,178205..178593,178625..>180135)	Theileria orientalis strain Shintoku	20715283
TOT_030000897	mRNA	TOT_030000897	NC_025262.1	180374	181193	D	TOT_030000897	join(<180374..180430,180461..180571,180608..180776,180897..180972,181031..>181193)	Theileria orientalis strain Shintoku	20716034
TOT_030000898	mRNA	TOT_030000898	NC_025262.1	181274	182062	R	TOT_030000898	complement(join(<181274..181440,181471..181528,181561..181644,181675..181818,181879..181943,181975..>182062))	Theileria orientalis strain Shintoku	20716035
TOT_030000082	mRNA	TOT_030000082	NC_025262.1	182132	182996	D	TOT_030000082	join(<182132..182216,182323..182525,182631..>182996)	Theileria orientalis strain Shintoku	20715284
TOT_030000083	mRNA	TOT_030000083	NC_025262.1	183280	188648	R	TOT_030000083	complement(join(<183280..183382,183422..184492,184529..184549,184580..184744,184967..186852,186961..188520,188556..>188648))	Theileria orientalis strain Shintoku	20715285
TOT_030000084	mRNA	TOT_030000084	NC_025262.1	188884	191730	D	TOT_030000084	join(<188884..189156,189228..189726,189766..189866,189898..190334,190398..190517,190618..190755,190841..191049,191081..>191730)	Theileria orientalis strain Shintoku	20715286
TOT_030000085	mRNA	TOT_030000085	NC_025262.1	192034	194781	D	TOT_030000085	join(<192034..192629,192717..193989,194128..>194781)	Theileria orientalis strain Shintoku	20715287
TOT_030000086	mRNA	TOT_030000086	NC_025262.1	194956	200764	D	TOT_030000086	join(<194956..195129,195199..195410,195562..196954,197267..198531,198598..>200764)	Theileria orientalis strain Shintoku	20715288
TOT_030000087	mRNA	TOT_030000087	NC_025262.1	201144	207488	R	TOT_030000087	complement(join(<201144..202626,202816..204472,204551..206295,206386..>207488))	Theileria orientalis strain Shintoku	20715289
TOT_030000088	mRNA	TOT_030000088	NC_025262.1	208123	209396	R	TOT_030000088	complement(join(<208123..209019,209049..209132,209184..209278,209309..>209396))	Theileria orientalis strain Shintoku	20715290
TOT_030000089	mRNA	TOT_030000089	NC_025262.1	210447	211676	R	TOT_030000089	complement(join(<210447..210627,210659..210934,210966..211018,211142..211342,211374..211468,211499..>211676))	Theileria orientalis strain Shintoku	20715291
TOT_030000090	mRNA	TOT_030000090	NC_025262.1	211886	212962	R	TOT_030000090	complement(join(<211886..211948,211981..212246,212286..212532,212595..212774,212876..>212962))	Theileria orientalis strain Shintoku	20715292
TOT_030000091	mRNA	TOT_030000091	NC_025262.1	213336	213800	R	TOT_030000091	complement(join(<213336..213389,213430..213481,213532..213605,213639..>213800))	Theileria orientalis strain Shintoku	20715293
TOT_030000092	mRNA	TOT_030000092	NC_025262.1	214203	215084	D	TOT_030000092	<214203..>215084	Theileria orientalis strain Shintoku	20715294
TOT_030000899	mRNA	TOT_030000899	NC_025262.1	215737	216245	D	TOT_030000899	join(<215737..215767,215798..215860,215890..216032,216062..216116,216181..>216245)	Theileria orientalis strain Shintoku	20716036
TOT_030000094	mRNA	TOT_030000094	NC_025262.1	216878	217497	R	TOT_030000094	complement(join(<216878..216927,217040..217140,217157..>217497))	Theileria orientalis strain Shintoku	20715295
TOT_030000095	mRNA	TOT_030000095	NC_025262.1	217642	218878	R	TOT_030000095	complement(join(<217642..217725,217853..217936,217964..218031,218061..218112,218143..218329,218362..218443,218473..218601,218634..218694,218726..>218878))	Theileria orientalis strain Shintoku	20715296
TOT_030000096	mRNA	TOT_030000096	NC_025262.1	219054	219949	D	TOT_030000096	join(<219054..219137,219178..219273,219313..219455,219522..219678,219767..>219949)	Theileria orientalis strain Shintoku	20715297
TOT_030000097	mRNA	TOT_030000097	NC_025262.1	220186	221170	D	TOT_030000097	join(<220186..220338,220369..220557,220660..220761,220793..220848,220888..>221170)	Theileria orientalis strain Shintoku	20715298
TOT_030000900	mRNA	TOT_030000900	NC_025262.1	221485	223151	R	TOT_030000900	complement(join(<221485..221680,221710..222096,222374..222516,222616..222798,222828..222901,222965..>223151))	Theileria orientalis strain Shintoku	20716037
TOT_030000901	mRNA	TOT_030000901	NC_025262.1	223346	225642	R	TOT_030000901	complement(join(<223346..223568,223601..223840,223874..223899,223933..223981,224015..224121,224152..224362,224462..224838,225031..225178,225211..225276,225311..225506,225537..>225642))	Theileria orientalis strain Shintoku	20716038
TOT_030000100	mRNA	TOT_030000100	NC_025262.1	225892	227352	D	TOT_030000100	<225892..>227352	Theileria orientalis strain Shintoku	20715299
TOT_030000101	mRNA	TOT_030000101	NC_025262.1	227618	227965	R	TOT_030000101	complement(join(<227618..227832,227864..227920,227953..>227965))	Theileria orientalis strain Shintoku	20715300
TOT_030000102	mRNA	TOT_030000102	NC_025262.1	228137	229551	D	TOT_030000102	join(<228137..228265,228306..228419,228459..228527,228669..228827,228857..229029,229061..229186,229305..>229551)	Theileria orientalis strain Shintoku	20715301
TOT_030000103	mRNA	TOT_030000103	NC_025262.1	229826	230311	R	TOT_030000103	complement(join(<229826..230212,230258..>230311))	Theileria orientalis strain Shintoku	20715302
TOT_030000104	mRNA	TOT_030000104	NC_025262.1	230317	230735	D	TOT_030000104	join(<230317..230511,230517..>230735)	Theileria orientalis strain Shintoku	20715303
TOT_030000105	mRNA	TOT_030000105	NC_025262.1	232632	235520	R	TOT_030000105	complement(join(<232632..232754,232763..232952,233590..233751,233854..234036,234286..234342,234427..234548,234565..234735,235234..235392,235494..>235520))	Theileria orientalis strain Shintoku	20715304
TOT_030000106	mRNA	TOT_030000106	NC_025262.1	239056	239925	D	TOT_030000106	join(<239056..239160,239276..239419,239478..239615,239716..>239925)	Theileria orientalis strain Shintoku	20715305
TOT_030000107	mRNA	TOT_030000107	NC_025262.1	240079	241237	R	TOT_030000107	complement(join(<240079..240488,240569..240838,240868..241038,241069..>241237))	Theileria orientalis strain Shintoku	20715306
TOT_030000108	mRNA	TOT_030000108	NC_025262.1	241913	242845	D	TOT_030000108	join(<241913..242085,242117..242200,242229..242311,242341..242456,242490..242558,242605..242700,242738..>242845)	Theileria orientalis strain Shintoku	20715307
TOT_030000109	mRNA	TOT_030000109	NC_025262.1	243277	250452	D	TOT_030000109	<243277..>250452	Theileria orientalis strain Shintoku	20715308
TOT_030000110	mRNA	TOT_030000110	NC_025262.1	250544	251982	D	TOT_030000110	join(<250544..251680,251755..251853,251875..>251982)	Theileria orientalis strain Shintoku	20715309
TOT_030000111	mRNA	TOT_030000111	NC_025262.1	252107	253057	R	TOT_030000111	complement(join(<252107..252327,252358..252601,252631..252711,252745..253014,253055..>253057))	Theileria orientalis strain Shintoku	20715310
TOT_030000112	mRNA	TOT_030000112	NC_025262.1	253481	255768	D	TOT_030000112	join(<253481..254998,255113..255247,255289..>255768)	Theileria orientalis strain Shintoku	20715311
TOT_030000113	mRNA	TOT_030000113	NC_025262.1	255922	257581	R	TOT_030000113	complement(join(<255922..256875,256906..257029,257087..257189,257224..257313,257361..257504,257536..>257581))	Theileria orientalis strain Shintoku	20715312
TOT_030000114	mRNA	TOT_030000114	NC_025262.1	258946	259459	R	TOT_030000114	complement(join(<258946..259106,259185..259259,259357..>259459))	Theileria orientalis strain Shintoku	20715313
TOT_030000115	mRNA	TOT_030000115	NC_025262.1	259688	260389	R	TOT_030000115	complement(join(<259688..260288,260376..>260389))	Theileria orientalis strain Shintoku	20715314
TOT_030000116	mRNA	TOT_030000116	NC_025262.1	260794	263346	D	TOT_030000116	join(<260794..262839,262963..263134,263201..>263346)	Theileria orientalis strain Shintoku	20715315
TOT_030000117	mRNA	TOT_030000117	NC_025262.1	263624	264859	R	TOT_030000117	complement(<263624..>264859)	Theileria orientalis strain Shintoku	20715316
TOT_030000118	mRNA	TOT_030000118	NC_025262.1	265702	272951	D	TOT_030000118	join(<265702..265720,265805..267853,267923..270409,270890..271784,271898..>272951)	Theileria orientalis strain Shintoku	20715317
TOT_030000119	mRNA	TOT_030000119	NC_025262.1	273431	274855	D	TOT_030000119	<273431..>274855	Theileria orientalis strain Shintoku	20715318
TOT_030000120	mRNA	TOT_030000120	NC_025262.1	275056	282428	R	TOT_030000120	complement(join(<275056..275304,275380..275588,275779..276016,276264..282020,282080..282280,282384..>282428))	Theileria orientalis strain Shintoku	20715319
TOT_030000121	mRNA	TOT_030000121	NC_025262.1	282600	282746	D	TOT_030000121	<282600..>282746	Theileria orientalis strain Shintoku	20715320
TOT_030000885	mRNA	TOT_030000885	NC_025262.1	282930	286848	D	TOT_030000885	join(<282930..283420,283541..284535,284571..285104,285169..286392,286430..>286848)	Theileria orientalis strain Shintoku	20716024
TOT_030000122	mRNA	TOT_030000122	NC_025262.1	287253	288109	D	TOT_030000122	join(<287253..287262,287400..287578,287861..>288109)	Theileria orientalis strain Shintoku	20715321
TOT_030000123	mRNA	TOT_030000123	NC_025262.1	288675	289736	D	TOT_030000123	join(<288675..288680,288745..289228,289313..289543,289681..>289736)	Theileria orientalis strain Shintoku	20715322
TOT_030000124	mRNA	TOT_030000124	NC_025262.1	289879	290868	D	TOT_030000124	<289879..>290868	Theileria orientalis strain Shintoku	20715323
TOT_030000125	mRNA	TOT_030000125	NC_025262.1	291030	291926	R	TOT_030000125	complement(join(<291030..291249,291280..291653,291720..291832,291878..>291926))	Theileria orientalis strain Shintoku	20715324
TOT_030000126	mRNA	TOT_030000126	NC_025262.1	292448	294309	D	TOT_030000126	join(<292448..293538,293570..294111,294143..>294309)	Theileria orientalis strain Shintoku	20715325
TOT_030000902	mRNA	TOT_030000902	NC_025262.1	294355	294672	R	TOT_030000902	complement(<294355..>294672)	Theileria orientalis strain Shintoku	20716039
TOT_030000128	mRNA	TOT_030000128	NC_025262.1	294884	296371	R	TOT_030000128	complement(<294884..>296371)	Theileria orientalis strain Shintoku	20715326
TOT_030000129	mRNA	TOT_030000129	NC_025262.1	296949	299505	R	TOT_030000129	complement(join(<296949..297122,297344..297496,297532..>299505))	Theileria orientalis strain Shintoku	20715327
TOT_030000130	mRNA	TOT_030000130	NC_025262.1	299658	299768	R	TOT_030000130	complement(<299658..>299768)	Theileria orientalis strain Shintoku	20715328
TOT_030000131	mRNA	TOT_030000131	NC_025262.1	299964	302804	R	TOT_030000131	complement(join(<299964..301087,301178..>302804))	Theileria orientalis strain Shintoku	20715329
TOT_030000132	mRNA	TOT_030000132	NC_025262.1	303044	303363	R	TOT_030000132	complement(join(<303044..303256,303310..>303363))	Theileria orientalis strain Shintoku	20715330
TOT_030000133	mRNA	TOT_030000133	NC_025262.1	303470	304117	R	TOT_030000133	complement(join(<303470..303552,303660..303734,303774..303896,304015..>304117))	Theileria orientalis strain Shintoku	20715331
TOT_030000134	mRNA	TOT_030000134	NC_025262.1	304344	305830	R	TOT_030000134	complement(join(<304344..304460,304491..304553,304591..304673,304716..305005,305044..305140,305173..305350,305380..305586,305621..>305830))	Theileria orientalis strain Shintoku	20715332
TOT_030000135	mRNA	TOT_030000135	NC_025262.1	306048	307010	D	TOT_030000135	join(<306048..306137,306200..306554,306587..306719,306769..306835,306873..>307010)	Theileria orientalis strain Shintoku	20715333
TOT_030000136	mRNA	TOT_030000136	NC_025262.1	307166	307583	R	TOT_030000136	complement(join(<307166..307260,307305..307376,307481..>307583))	Theileria orientalis strain Shintoku	20715334
TOT_030000137	mRNA	TOT_030000137	NC_025262.1	308283	309859	D	TOT_030000137	join(<308283..309680,309800..>309859)	Theileria orientalis strain Shintoku	20715335
TOT_030000138	mRNA	TOT_030000138	NC_025262.1	310063	311054	D	TOT_030000138	join(<310063..310854,310932..>311054)	Theileria orientalis strain Shintoku	20715336
TOT_030000139	mRNA	TOT_030000139	NC_025262.1	311143	313395	R	TOT_030000139	complement(join(<311143..311579,311807..312054,312093..312711,312771..313106,313185..>313395))	Theileria orientalis strain Shintoku	20715337
TOT_030000140	mRNA	TOT_030000140	NC_025262.1	313782	317312	R	TOT_030000140	complement(<313782..>317312)	Theileria orientalis strain Shintoku	20715338
TOT_030000141	mRNA	TOT_030000141	NC_025262.1	318797	321068	D	TOT_030000141	join(<318797..319292,319324..319380,319451..319807,319862..320251,320529..320683,320922..>321068)	Theileria orientalis strain Shintoku	20715339
TOT_030000142	mRNA	TOT_030000142	NC_025262.1	321428	321868	D	TOT_030000142	<321428..>321868	Theileria orientalis strain Shintoku	20715340
TOT_030000143	mRNA	TOT_030000143	NC_025262.1	322148	322546	D	TOT_030000143	<322148..>322546	Theileria orientalis strain Shintoku	20715341
TOT_030000144	mRNA	TOT_030000144	NC_025262.1	322914	323777	D	TOT_030000144	<322914..>323777	Theileria orientalis strain Shintoku	20715342
TOT_030000145	mRNA	TOT_030000145	NC_025262.1	323998	324276	D	TOT_030000145	join(<323998..324123,324196..>324276)	Theileria orientalis strain Shintoku	20715343
TOT_030000146	mRNA	TOT_030000146	NC_025262.1	324371	324734	R	TOT_030000146	complement(join(<324371..324622,324645..>324734))	Theileria orientalis strain Shintoku	20715344
TOT_030000147	mRNA	TOT_030000147	NC_025262.1	324856	326508	R	TOT_030000147	complement(<324856..>326508)	Theileria orientalis strain Shintoku	20715345
TOT_030000148	mRNA	TOT_030000148	NC_025262.1	327539	329062	D	TOT_030000148	join(<327539..328024,328061..>329062)	Theileria orientalis strain Shintoku	20715346
TOT_030000149	mRNA	TOT_030000149	NC_025262.1	329361	330782	D	TOT_030000149	<329361..>330782	Theileria orientalis strain Shintoku	20715347
TOT_030000150	mRNA	TOT_030000150	NC_025262.1	331188	331825	R	TOT_030000150	complement(join(<331188..331607,331640..>331825))	Theileria orientalis strain Shintoku	20715348
TOT_030000151	mRNA	TOT_030000151	NC_025262.1	332214	332525	D	TOT_030000151	join(<332214..332231,332400..>332525)	Theileria orientalis strain Shintoku	20715349
TOT_030000152	mRNA	TOT_030000152	NC_025262.1	333051	334175	D	TOT_030000152	<333051..>334175	Theileria orientalis strain Shintoku	20715350
TOT_030000153	mRNA	TOT_030000153	NC_025262.1	334251	334906	R	TOT_030000153	complement(join(<334251..334373,334401..334515,334737..>334906))	Theileria orientalis strain Shintoku	20715351
TOT_030000154	mRNA	TOT_030000154	NC_025262.1	335154	335582	D	TOT_030000154	<335154..>335582	Theileria orientalis strain Shintoku	20715352
TOT_030000155	mRNA	TOT_030000155	NC_025262.1	335685	336191	R	TOT_030000155	complement(<335685..>336191)	Theileria orientalis strain Shintoku	20715353
TOT_030000156	mRNA	TOT_030000156	NC_025262.1	337123	338928	D	TOT_030000156	join(<337123..337140,337205..337265,337326..337418,337492..337777,337869..338443,338611..338712,338822..>338928)	Theileria orientalis strain Shintoku	20715354
TOT_030000157	mRNA	TOT_030000157	NC_025262.1	339061	339312	R	TOT_030000157	complement(<339061..>339312)	Theileria orientalis strain Shintoku	20715355
TOT_030000158	mRNA	TOT_030000158	NC_025262.1	339373	342261	D	TOT_030000158	join(<339373..339652,339719..339841,339907..340019,340112..340433,340514..340673,341280..341707,341954..>342261)	Theileria orientalis strain Shintoku	20715356
TOT_030000159	mRNA	TOT_030000159	NC_025262.1	342302	342403	R	TOT_030000159	complement(<342302..>342403)	Theileria orientalis strain Shintoku	20715357
TOT_030000160	mRNA	TOT_030000160	NC_025262.1	342478	343442	D	TOT_030000160	join(<342478..342595,342613..343047,343117..>343442)	Theileria orientalis strain Shintoku	20715358
TOT_030000161	mRNA	TOT_030000161	NC_025262.1	343456	344737	D	TOT_030000161	join(<343456..343723,343816..343986,344054..344097,344156..344271,344365..>344737)	Theileria orientalis strain Shintoku	20715359
TOT_030000162	mRNA	TOT_030000162	NC_025262.1	345372	346808	R	TOT_030000162	complement(<345372..>346808)	Theileria orientalis strain Shintoku	20715360
TOT_030000163	mRNA	TOT_030000163	NC_025262.1	346904	347703	R	TOT_030000163	complement(join(<346904..347103,347269..347462,347648..>347703))	Theileria orientalis strain Shintoku	20715361
TOT_030000164	mRNA	TOT_030000164	NC_025262.1	347784	348346	R	TOT_030000164	complement(join(<347784..348011,348080..348176,348245..348309,348344..>348346))	Theileria orientalis strain Shintoku	20715362
TOT_030000165	mRNA	TOT_030000165	NC_025262.1	348892	351069	R	TOT_030000165	complement(join(<348892..349148,349179..349388,349477..349533,349632..349687,349763..349818,349944..349995,350034..350073,350343..350444,350569..350648,350679..350759,350831..>351069))	Theileria orientalis strain Shintoku	20715363
TOT_030000166	mRNA	TOT_030000166	NC_025262.1	352067	353444	D	TOT_030000166	join(<352067..352107,352138..352175,352878..352974,353012..353126,353176..353274,353382..>353444)	Theileria orientalis strain Shintoku	20715364
TOT_030000167	mRNA	TOT_030000167	NC_025262.1	353553	355913	D	TOT_030000167	join(<353553..353955,354060..354349,354578..355098,355150..355384,355574..355711,355788..>355913)	Theileria orientalis strain Shintoku	20715365
TOT_030000168	mRNA	TOT_030000168	NC_025262.1	356007	356850	R	TOT_030000168	complement(join(<356007..356506,356599..356708,356792..>356850))	Theileria orientalis strain Shintoku	20715366
TOT_030000169	mRNA	TOT_030000169	NC_025262.1	357353	360169	D	TOT_030000169	join(<357353..357434,357541..357677,357774..357901,358006..358112,358167..358305,358407..358530,358662..358736,358769..358825,358856..359046,359170..359386,359526..359813,360053..>360169)	Theileria orientalis strain Shintoku	20715367
TOT_030000170	mRNA	TOT_030000170	NC_025262.1	360744	363391	R	TOT_030000170	complement(join(<360744..361376,361806..363154,363211..>363391))	Theileria orientalis strain Shintoku	20715368
TOT_030000171	mRNA	TOT_030000171	NC_025262.1	364095	365708	D	TOT_030000171	join(<364095..364103,364127..364356,365136..365419,365527..>365708)	Theileria orientalis strain Shintoku	20715369
TOT_030000172	mRNA	TOT_030000172	NC_025262.1	365957	371788	R	TOT_030000172	complement(join(<365957..366396,366472..366819,366934..367275,367330..368608,368873..369328,369425..369574,369647..369807,369883..>371788))	Theileria orientalis strain Shintoku	20715370
TOT_030000173	mRNA	TOT_030000173	NC_025262.1	372121	372909	R	TOT_030000173	complement(<372121..>372909)	Theileria orientalis strain Shintoku	20715371
TOT_030000174	mRNA	TOT_030000174	NC_025262.1	373557	373899	R	TOT_030000174	complement(join(<373557..373614,373749..373843,373882..>373899))	Theileria orientalis strain Shintoku	20715372
TOT_030000903	mRNA	TOT_030000903	NC_025262.1	374212	375612	R	TOT_030000903	complement(join(<374212..374346,374407..>375612))	Theileria orientalis strain Shintoku	20716040
TOT_030000904	mRNA	TOT_030000904	NC_025262.1	375915	378089	R	TOT_030000904	complement(join(<375915..375998,376029..376288,376372..376481,376581..376697,376787..376925,377021..377117,377207..377244,377280..377349,377381..377416,377439..377550,377610..377711,377848..377923,378011..>378089))	Theileria orientalis strain Shintoku	20716041
TOT_030000177	mRNA	TOT_030000177	NC_025262.1	378332	379151	R	TOT_030000177	complement(join(<378332..378384,378439..378630,378660..378867,379026..>379151))	Theileria orientalis strain Shintoku	20715373
TOT_030000178	mRNA	TOT_030000178	NC_025262.1	379442	379920	D	TOT_030000178	join(<379442..379557,379618..379655,379748..>379920)	Theileria orientalis strain Shintoku	20715374
TOT_030000179	mRNA	TOT_030000179	NC_025262.1	380901	381005	R	TOT_030000179	complement(<380901..>381005)	Theileria orientalis strain Shintoku	20715375
TOT_030000180	mRNA	TOT_030000180	NC_025262.1	381544	381799	R	TOT_030000180	complement(join(<381544..381677,381742..>381799))	Theileria orientalis strain Shintoku	20715376
TOT_030000181	mRNA	TOT_030000181	NC_025262.1	382909	384078	D	TOT_030000181	join(<382909..383593,383756..383948,384009..>384078)	Theileria orientalis strain Shintoku	20715377
TOT_030000182	mRNA	TOT_030000182	NC_025262.1	384175	387132	D	TOT_030000182	join(<384175..384423,384551..385084,385222..385312,385457..385632,385692..385799,385986..386303,386499..386580,386645..386868,386974..>387132)	Theileria orientalis strain Shintoku	20715378
TOT_030000183	mRNA	TOT_030000183	NC_025262.1	387272	390254	R	TOT_030000183	complement(join(<387272..387517,387582..387653,387693..387743,387776..387838,387890..387956,388061..388133,388203..388400,388463..388675,388757..388799,388923..389064,389097..389204,389282..389418,389501..389602,389808..389898,389942..390019,390049..390140,390171..>390254))	Theileria orientalis strain Shintoku	20715379
TOT_030000184	mRNA	TOT_030000184	NC_025262.1	390607	392938	R	TOT_030000184	complement(join(<390607..390903,391163..392034,392080..392359,392438..>392938))	Theileria orientalis strain Shintoku	20715380
TOT_030000185	mRNA	TOT_030000185	NC_025262.1	393658	394701	R	TOT_030000185	complement(join(<393658..393825,393924..394245,394373..>394701))	Theileria orientalis strain Shintoku	20715381
TOT_030000186	mRNA	TOT_030000186	NC_025262.1	395554	396635	D	TOT_030000186	join(<395554..395929,396085..>396635)	Theileria orientalis strain Shintoku	20715382
TOT_030000905	mRNA	TOT_030000905	NC_025262.1	396802	399787	R	TOT_030000905	complement(join(<396802..396921,397030..397309,397486..398104,398315..398652,398725..398918,399017..>399787))	Theileria orientalis strain Shintoku	20716042
TOT_030000906	mRNA	TOT_030000906	NC_025262.1	400158	400679	R	TOT_030000906	complement(join(<400158..400301,400405..400505,400589..>400679))	Theileria orientalis strain Shintoku	20716043
TOT_030000189	mRNA	TOT_030000189	NC_025262.1	400942	402400	D	TOT_030000189	join(<400942..401308,401665..401762,402188..>402400)	Theileria orientalis strain Shintoku	20715383
TOT_030000190	mRNA	TOT_030000190	NC_025262.1	402653	403523	R	TOT_030000190	complement(join(<402653..402737,402964..403209,403363..>403523))	Theileria orientalis strain Shintoku	20715384
TOT_030000191	mRNA	TOT_030000191	NC_025262.1	404069	405723	R	TOT_030000191	complement(join(<404069..404224,404288..404344,404376..404816,404884..405102,405229..>405723))	Theileria orientalis strain Shintoku	20715385
TOT_030000192	mRNA	TOT_030000192	NC_025262.1	405976	408445	R	TOT_030000192	complement(join(<405976..406557,406660..406716,406748..407218,407324..407631,407706..408138,408260..>408445))	Theileria orientalis strain Shintoku	20715386
TOT_030000193	mRNA	TOT_030000193	NC_025262.1	409822	410670	D	TOT_030000193	join(<409822..409866,410023..410491,410591..>410670)	Theileria orientalis strain Shintoku	20715387
TOT_030000194	mRNA	TOT_030000194	NC_025262.1	411538	412842	D	TOT_030000194	join(<411538..412533,412645..>412842)	Theileria orientalis strain Shintoku	20715388
TOT_030000195	mRNA	TOT_030000195	NC_025262.1	413179	416167	R	TOT_030000195	complement(join(<413179..415991,416074..>416167))	Theileria orientalis strain Shintoku	20715389
TOT_030000196	mRNA	TOT_030000196	NC_025262.1	416227	418249	R	TOT_030000196	complement(join(<416227..416388,416757..416934,417031..417084,417114..>418249))	Theileria orientalis strain Shintoku	20715390
TOT_030000197	mRNA	TOT_030000197	NC_025262.1	419191	423822	D	TOT_030000197	join(<419191..421024,421136..421527,421603..421874,422025..422642,422880..422967,423052..>423822)	Theileria orientalis strain Shintoku	20715391
TOT_030000198	mRNA	TOT_030000198	NC_025262.1	423848	425091	D	TOT_030000198	join(<423848..424019,424050..424222,424255..424477,424511..>425091)	Theileria orientalis strain Shintoku	20715392
TOT_030000199	mRNA	TOT_030000199	NC_025262.1	425351	426200	R	TOT_030000199	complement(join(<425351..425468,425591..425839,425869..426005,426052..426128,426161..>426200))	Theileria orientalis strain Shintoku	20715393
TOT_030000200	mRNA	TOT_030000200	NC_025262.1	426444	428918	D	TOT_030000200	join(<426444..426648,426681..426896,426927..427004,427066..427151,427213..427333,427364..427593,427645..427779,427826..427909,428001..428113,428172..428330,428393..428457,428513..428648,428813..>428918)	Theileria orientalis strain Shintoku	20715394
TOT_030000201	mRNA	TOT_030000201	NC_025262.1	429235	429664	R	TOT_030000201	complement(join(<429235..429353,429418..429515,429558..>429664))	Theileria orientalis strain Shintoku	20715395
TOT_030000202	mRNA	TOT_030000202	NC_025262.1	429847	442451	R	TOT_030000202	complement(join(<429847..429982,430071..430152,430301..431376,431509..431996,432120..434602,434780..436723,436859..437675,437736..438372,438424..440071,440129..440688,440977..>442451))	Theileria orientalis strain Shintoku	20715396
TOT_030000203	mRNA	TOT_030000203	NC_025262.1	443610	450434	D	TOT_030000203	<443610..>450434	Theileria orientalis strain Shintoku	20715397
TOT_030000204	mRNA	TOT_030000204	NC_025262.1	450765	451559	D	TOT_030000204	join(<450765..450814,450848..450915,450947..451005,451038..451324,451376..>451559)	Theileria orientalis strain Shintoku	20715398
TOT_030000205	mRNA	TOT_030000205	NC_025262.1	451772	452410	D	TOT_030000205	join(<451772..452342,452376..>452410)	Theileria orientalis strain Shintoku	20715399
TOT_030000206	mRNA	TOT_030000206	NC_025262.1	452705	458928	R	TOT_030000206	complement(join(<452705..452849,452985..453086,453244..453469,453624..453796,453911..454692,454933..455485,455594..455851,455975..456941,456999..458093,458244..>458928))	Theileria orientalis strain Shintoku	20715400
TOT_030000207	mRNA	TOT_030000207	NC_025262.1	459491	462802	D	TOT_030000207	join(<459491..459545,459631..459749,459780..459871,459904..460054,460085..460155,460187..460349,460379..460510,460542..460766,460822..460974,461006..461069,461171..461280,461322..461412,461467..461551,461672..461969,462000..462035,462120..462192,462226..462326,462425..462517,462557..>462802)	Theileria orientalis strain Shintoku	20715401
TOT_030000208	mRNA	TOT_030000208	NC_025262.1	463144	464703	R	TOT_030000208	complement(<463144..>464703)	Theileria orientalis strain Shintoku	20715402
TOT_030000209	mRNA	TOT_030000209	NC_025262.1	465593	466129	D	TOT_030000209	<465593..>466129	Theileria orientalis strain Shintoku	20715403
TOT_030000210	mRNA	TOT_030000210	NC_025262.1	466227	468722	D	TOT_030000210	join(<466227..467854,467963..>468722)	Theileria orientalis strain Shintoku	20715404
TOT_030000211	mRNA	TOT_030000211	NC_025262.1	468937	470026	R	TOT_030000211	complement(join(<468937..469181,469212..469378,469408..469530,469562..469691,469724..469804,469836..469877,469924..>470026))	Theileria orientalis strain Shintoku	20715405
TOT_030000212	mRNA	TOT_030000212	NC_025262.1	470325	471005	R	TOT_030000212	complement(join(<470325..470362,470507..470688,470755..>471005))	Theileria orientalis strain Shintoku	20715406
TOT_030000213	mRNA	TOT_030000213	NC_025262.1	471325	471728	R	TOT_030000213	complement(join(<471325..471445,471601..>471728))	Theileria orientalis strain Shintoku	20715407
TOT_030000214	mRNA	TOT_030000214	NC_025262.1	471983	477160	R	TOT_030000214	complement(join(<471983..472133,472149..472216,472272..472454,472486..472551,472582..472648,472757..472898,473038..473177,473246..473354,473499..473699,473772..473867,474042..474231,474274..474366,474501..474818,474918..475236,475285..475450,475488..475650,475760..475903,475940..476026,476057..476203,476237..476364,476395..476482,476512..476607,476657..>477160))	Theileria orientalis strain Shintoku	20715408
TOT_030000215	mRNA	TOT_030000215	NC_025262.1	477329	477922	D	TOT_030000215	join(<477329..477677,477792..>477922)	Theileria orientalis strain Shintoku	20715409
TOT_030000216	mRNA	TOT_030000216	NC_025262.1	477952	479341	R	TOT_030000216	complement(join(<477952..478090,478209..>479341))	Theileria orientalis strain Shintoku	20715410
TOT_030000217	mRNA	TOT_030000217	NC_025262.1	479591	487042	R	TOT_030000217	complement(join(<479591..482326,482384..482928,483043..483528,483931..484738,484812..485207,485345..485559,485716..485919,486744..486935,487015..>487042))	Theileria orientalis strain Shintoku	20715411
TOT_030000218	mRNA	TOT_030000218	NC_025262.1	487269	491135	R	TOT_030000218	complement(join(<487269..488723,488982..>491135))	Theileria orientalis strain Shintoku	20715412
TOT_030000219	mRNA	TOT_030000219	NC_025262.1	492014	494012	D	TOT_030000219	join(<492014..492036,492173..493477,493550..>494012)	Theileria orientalis strain Shintoku	20715413
TOT_030000220	mRNA	TOT_030000220	NC_025262.1	494240	496381	R	TOT_030000220	complement(join(<494240..494332,494376..494495,494552..494724,494914..495031,495063..495173,495203..495474,495504..495642,496241..>496381))	Theileria orientalis strain Shintoku	20715414
TOT_030000221	mRNA	TOT_030000221	NC_025262.1	496864	497502	D	TOT_030000221	<496864..>497502	Theileria orientalis strain Shintoku	20715415
TOT_030000222	mRNA	TOT_030000222	NC_025262.1	497711	498494	R	TOT_030000222	complement(join(<497711..497938,498038..498192,498380..>498494))	Theileria orientalis strain Shintoku	20715416
TOT_030000223	mRNA	TOT_030000223	NC_025262.1	499124	503022	D	TOT_030000223	join(<499124..499234,499366..501894,501964..>503022)	Theileria orientalis strain Shintoku	20715417
TOT_030000224	mRNA	TOT_030000224	NC_025262.1	503538	506194	R	TOT_030000224	complement(join(<503538..503616,503650..503786,503927..505462,505569..505810,506020..>506194))	Theileria orientalis strain Shintoku	20715418
TOT_030000225	mRNA	TOT_030000225	NC_025262.1	506486	507014	R	TOT_030000225	complement(join(<506486..506647,506742..>507014))	Theileria orientalis strain Shintoku	20715419
TOT_030000226	mRNA	TOT_030000226	NC_025262.1	507179	507726	D	TOT_030000226	join(<507179..507347,507423..507510,507561..>507726)	Theileria orientalis strain Shintoku	20715420
TOT_030000227	mRNA	TOT_030000227	NC_025262.1	507887	508345	R	TOT_030000227	complement(join(<507887..508157,508263..>508345))	Theileria orientalis strain Shintoku	20715421
TOT_030000228	mRNA	TOT_030000228	NC_025262.1	509022	510093	D	TOT_030000228	join(<509022..509276,509371..509666,509751..>510093)	Theileria orientalis strain Shintoku	20715422
TOT_030000229	mRNA	TOT_030000229	NC_025262.1	510216	511513	R	TOT_030000229	complement(join(<510216..510408,510468..511318,511463..>511513))	Theileria orientalis strain Shintoku	20715423
TOT_030000230	mRNA	TOT_030000230	NC_025262.1	511615	515139	R	TOT_030000230	complement(join(<511615..511765,511838..512043,512295..512448,512482..512556,512659..512802,512894..513110,513228..513294,513338..513406,513448..513951,514080..514317,514386..514463,514495..514580,514622..514773,514857..>515139))	Theileria orientalis strain Shintoku	20715424
TOT_030000231	mRNA	TOT_030000231	NC_025262.1	515831	520278	D	TOT_030000231	join(<515831..516256,516372..519549,519686..>520278)	Theileria orientalis strain Shintoku	20715425
TOT_030000907	mRNA	TOT_030000907	NC_025262.1	520342	520911	R	TOT_030000907	complement(<520342..>520911)	Theileria orientalis strain Shintoku	20716044
TOT_030000233	mRNA	TOT_030000233	NC_025262.1	521183	522100	D	TOT_030000233	<521183..>522100	Theileria orientalis strain Shintoku	20715426
TOT_030000234	mRNA	TOT_030000234	NC_025262.1	522417	523902	R	TOT_030000234	complement(join(<522417..522987,523024..523117,523224..523404,523438..523586,523620..>523902))	Theileria orientalis strain Shintoku	20715427
TOT_030000235	mRNA	TOT_030000235	NC_025262.1	523961	525647	D	TOT_030000235	join(<523961..524240,524354..524512,524545..524709,524823..525110,525195..525400,525435..>525647)	Theileria orientalis strain Shintoku	20715428
TOT_030000236	mRNA	TOT_030000236	NC_025262.1	526544	527443	D	TOT_030000236	join(<526544..526805,526945..527004,527037..>527443)	Theileria orientalis strain Shintoku	20715429
TOT_030000237	mRNA	TOT_030000237	NC_025262.1	527794	546382	D	TOT_030000237	join(<527794..528410,528472..529778,529899..530160,530251..530470,530582..531163,531257..531593,531633..531737,531974..532929,533131..533291,533334..533733,533941..534273,534763..535305,535690..536257,536441..536590,536896..537457,537953..539023,539120..539414,539463..540248,540740..541081,541164..541613,541735..541877,541919..542099,542131..542235,542328..543425,543540..544330,544428..544712,544804..545184,545373..545610,545649..545698,545849..546162,546273..>546382)	Theileria orientalis strain Shintoku	20715430
TOT_030000238	mRNA	TOT_030000238	NC_025262.1	546537	547014	D	TOT_030000238	join(<546537..546633,546671..>547014)	Theileria orientalis strain Shintoku	20715431
TOT_030000239	mRNA	TOT_030000239	NC_025262.1	547254	547803	D	TOT_030000239	join(<547254..547350,547478..>547803)	Theileria orientalis strain Shintoku	20715432
TOT_030000240	mRNA	TOT_030000240	NC_025262.1	548139	548279	R	TOT_030000240	complement(<548139..>548279)	Theileria orientalis strain Shintoku	20715433
TOT_030000241	mRNA	TOT_030000241	NC_025262.1	548751	551227	R	TOT_030000241	complement(join(<548751..549032,549204..549368,549451..549551,549779..549836,549937..550119,550158..550391,550423..550557,550589..550758,550811..550873,550912..550984,551018..>551227))	Theileria orientalis strain Shintoku	20715434
TOT_030000242	mRNA	TOT_030000242	NC_025262.1	551407	552609	R	TOT_030000242	complement(<551407..>552609)	Theileria orientalis strain Shintoku	20715435
TOT_030000243	mRNA	TOT_030000243	NC_025262.1	552872	553609	R	TOT_030000243	complement(join(<552872..552931,552962..553081,553113..553213,553244..553397,553440..553550,553589..>553609))	Theileria orientalis strain Shintoku	20715436
TOT_030000908	mRNA	TOT_030000908	NC_025262.1	553977	555545	D	TOT_030000908	join(<553977..554432,554464..554970,555028..555278,555308..>555545)	Theileria orientalis strain Shintoku	20716045
TOT_030000245	mRNA	TOT_030000245	NC_025262.1	555952	556617	D	TOT_030000245	<555952..>556617	Theileria orientalis strain Shintoku	20715437
TOT_030000246	mRNA	TOT_030000246	NC_025262.1	557069	558469	D	TOT_030000246	join(<557069..557544,557593..>558469)	Theileria orientalis strain Shintoku	20715438
TOT_030000247	mRNA	TOT_030000247	NC_025262.1	558860	560771	R	TOT_030000247	complement(join(<558860..558988,559072..559186,559216..559282,559323..559370,559402..559461,559536..559901,559931..560065,560198..560546,560580..>560771))	Theileria orientalis strain Shintoku	20715439
TOT_030000248	mRNA	TOT_030000248	NC_025262.1	561826	563455	D	TOT_030000248	join(<561826..561878,561917..562046,562070..562306,562337..562574,562607..562848,563026..563201,563362..>563455)	Theileria orientalis strain Shintoku	20715440
TOT_030000249	mRNA	TOT_030000249	NC_025262.1	563543	564265	R	TOT_030000249	complement(join(<563543..563606,563644..564175,564211..>564265))	Theileria orientalis strain Shintoku	20715441
TOT_030000250	mRNA	TOT_030000250	NC_025262.1	564567	566697	D	TOT_030000250	join(<564567..564632,564666..564860,564911..565048,565079..565136,565167..565234,565265..565335,565366..565516,565574..565649,565686..565897,566049..566189,566256..566474,566506..>566697)	Theileria orientalis strain Shintoku	20715442
TOT_030000251	mRNA	TOT_030000251	NC_025262.1	566819	568444	D	TOT_030000251	join(<566819..566866,566943..567276,567308..567578,567617..567731,567762..567825,567912..567964,567999..568074,568113..568195,568229..568312,568379..>568444)	Theileria orientalis strain Shintoku	20715443
TOT_030000252	mRNA	TOT_030000252	NC_025262.1	568585	569109	D	TOT_030000252	<568585..>569109	Theileria orientalis strain Shintoku	20715444
TOT_030000253	mRNA	TOT_030000253	NC_025262.1	569404	572956	D	TOT_030000253	join(<569404..569577,569684..569837,569873..569960,570025..570184,570273..570504,570573..571984,572196..572685,572780..572845,572895..>572956)	Theileria orientalis strain Shintoku	20715445
TOT_030000254	mRNA	TOT_030000254	NC_025262.1	572997	573296	D	TOT_030000254	<572997..>573296	Theileria orientalis strain Shintoku	20715446
TOT_030000255	mRNA	TOT_030000255	NC_025262.1	573308	573719	D	TOT_030000255	join(<573308..573599,573640..>573719)	Theileria orientalis strain Shintoku	20715447
TOT_030000256	mRNA	TOT_030000256	NC_025262.1	573995	576559	R	TOT_030000256	complement(join(<573995..574416,574619..574772,574862..575188,575239..575449,575516..575705,575749..>576559))	Theileria orientalis strain Shintoku	20715448
TOT_030000257	mRNA	TOT_030000257	NC_025262.1	577446	577778	D	TOT_030000257	<577446..>577778	Theileria orientalis strain Shintoku	20715449
TOT_030000258	mRNA	TOT_030000258	NC_025262.1	578086	580092	D	TOT_030000258	join(<578086..578256,578397..578569,578632..578930,578977..579324,579446..>580092)	Theileria orientalis strain Shintoku	20715450
TOT_030000259	mRNA	TOT_030000259	NC_025262.1	580203	580638	R	TOT_030000259	complement(join(<580203..580369,580497..>580638))	Theileria orientalis strain Shintoku	20715451
TOT_030000260	mRNA	TOT_030000260	NC_025262.1	580919	582694	R	TOT_030000260	complement(join(<580919..580978,580990..581069,581221..>582694))	Theileria orientalis strain Shintoku	20715452
TOT_030000261	mRNA	TOT_030000261	NC_025262.1	583314	583597	D	TOT_030000261	join(<583314..583317,583419..>583597)	Theileria orientalis strain Shintoku	20715453
TOT_030000909	mRNA	TOT_030000909	NC_025262.1	583641	584286	R	TOT_030000909	complement(join(<583641..584070,584138..>584286))	Theileria orientalis strain Shintoku	20716046
TOT_030000263	mRNA	TOT_030000263	NC_025262.1	584439	588686	R	TOT_030000263	complement(join(<584439..584777,584975..585074,585108..585190,585257..585319,585442..585537,585569..585697,585827..586069,586149..586306,586424..586645,586853..586975,587021..588281,588342..>588686))	Theileria orientalis strain Shintoku	20715454
TOT_030000264	mRNA	TOT_030000264	NC_025262.1	588926	589651	R	TOT_030000264	complement(join(<588926..589203,589265..589297,589387..589533,589603..>589651))	Theileria orientalis strain Shintoku	20715455
TOT_030000265	mRNA	TOT_030000265	NC_025262.1	589858	590110	R	TOT_030000265	complement(join(<589858..589971,590021..>590110))	Theileria orientalis strain Shintoku	20715456
TOT_030000266	mRNA	TOT_030000266	NC_025262.1	590129	591558	R	TOT_030000266	complement(join(<590129..590284,590352..590549,590682..590778,590812..591134,591179..591246,591278..591375,591464..>591558))	Theileria orientalis strain Shintoku	20715457
TOT_030000267	mRNA	TOT_030000267	NC_025262.1	591724	592121	D	TOT_030000267	join(<591724..591811,591909..591998,592033..>592121)	Theileria orientalis strain Shintoku	20715458
TOT_030000268	mRNA	TOT_030000268	NC_025262.1	592440	592803	D	TOT_030000268	join(<592440..592525,592559..592628,592672..>592803)	Theileria orientalis strain Shintoku	20715459
TOT_030000269	mRNA	TOT_030000269	NC_025262.1	592730	593465	R	TOT_030000269	complement(join(<592730..592783,592899..>593465))	Theileria orientalis strain Shintoku	20715460
TOT_030000270	mRNA	TOT_030000270	NC_025262.1	593665	594610	D	TOT_030000270	join(<593665..593774,593866..>594610)	Theileria orientalis strain Shintoku	20715461
TOT_030000271	mRNA	TOT_030000271	NC_025262.1	594707	596368	R	TOT_030000271	complement(join(<594707..594805,594837..594967,595028..595385,595556..>596368))	Theileria orientalis strain Shintoku	20715462
TOT_030000272	mRNA	TOT_030000272	NC_025262.1	596529	599784	R	TOT_030000272	complement(join(<596529..596659,596759..599382,599434..599704,599739..>599784))	Theileria orientalis strain Shintoku	20715463
TOT_030000273	mRNA	TOT_030000273	NC_025262.1	600031	600321	D	TOT_030000273	join(<600031..600136,600206..>600321)	Theileria orientalis strain Shintoku	20715464
TOT_030000274	mRNA	TOT_030000274	NC_025262.1	600869	601741	D	TOT_030000274	<600869..>601741	Theileria orientalis strain Shintoku	20715465
TOT_030000275	mRNA	TOT_030000275	NC_025262.1	602028	603008	R	TOT_030000275	complement(<602028..>603008)	Theileria orientalis strain Shintoku	20715466
TOT_030000276	mRNA	TOT_030000276	NC_025262.1	603320	605638	D	TOT_030000276	join(<603320..603376,603479..603719,603792..>605638)	Theileria orientalis strain Shintoku	20715467
TOT_030000277	mRNA	TOT_030000277	NC_025262.1	606218	607517	R	TOT_030000277	complement(join(<606218..606440,606472..606707,606798..606913,606979..607057,607089..>607517))	Theileria orientalis strain Shintoku	20715468
TOT_030000278	mRNA	TOT_030000278	NC_025262.1	607668	608401	D	TOT_030000278	join(<607668..607697,607731..607892,607922..608101,608135..>608401)	Theileria orientalis strain Shintoku	20715469
TOT_030000279	mRNA	TOT_030000279	NC_025262.1	608619	609286	D	TOT_030000279	join(<608619..608862,608904..>609286)	Theileria orientalis strain Shintoku	20715470
TOT_030000280	mRNA	TOT_030000280	NC_025262.1	609449	611608	D	TOT_030000280	<609449..>611608	Theileria orientalis strain Shintoku	20715471
TOT_030000281	mRNA	TOT_030000281	NC_025262.1	611698	612750	R	TOT_030000281	complement(join(<611698..611865,611976..612059,612089..612133,612169..612218,612250..612316,612369..612441,612473..612528,612566..612610,612655..>612750))	Theileria orientalis strain Shintoku	20715472
TOT_030000282	mRNA	TOT_030000282	NC_025262.1	612833	613722	R	TOT_030000282	complement(join(<612833..612928,613119..613314,613352..>613722))	Theileria orientalis strain Shintoku	20715473
TOT_030000283	mRNA	TOT_030000283	NC_025262.1	614550	615043	R	TOT_030000283	complement(join(<614550..614667,614676..>615043))	Theileria orientalis strain Shintoku	20715474
TOT_030000284	mRNA	TOT_030000284	NC_025262.1	615624	616328	R	TOT_030000284	complement(<615624..>616328)	Theileria orientalis strain Shintoku	20715475
TOT_030000285	mRNA	TOT_030000285	NC_025262.1	616864	617625	R	TOT_030000285	complement(<616864..>617625)	Theileria orientalis strain Shintoku	20715476
TOT_030000286	mRNA	TOT_030000286	NC_025262.1	618140	618766	R	TOT_030000286	complement(<618140..>618766)	Theileria orientalis strain Shintoku	20715477
TOT_030000287	mRNA	TOT_030000287	NC_025262.1	619141	619770	R	TOT_030000287	complement(<619141..>619770)	Theileria orientalis strain Shintoku	20715478
TOT_030000288	mRNA	TOT_030000288	NC_025262.1	619921	620589	R	TOT_030000288	complement(<619921..>620589)	Theileria orientalis strain Shintoku	20715479
TOT_030000289	mRNA	TOT_030000289	NC_025262.1	620773	622622	R	TOT_030000289	complement(join(<620773..621477,621617..622261,622569..>622622))	Theileria orientalis strain Shintoku	20715480
TOT_030000290	mRNA	TOT_030000290	NC_025262.1	623129	625476	D	TOT_030000290	join(<623129..623175,623215..623281,623387..623504,623553..623640,623714..624113,624144..624290,624321..624489,624769..624985,625018..625195,625360..>625476)	Theileria orientalis strain Shintoku	20715481
TOT_030000291	mRNA	TOT_030000291	NC_025262.1	625611	626616	R	TOT_030000291	complement(join(<625611..625829,625867..625916,625956..>626616))	Theileria orientalis strain Shintoku	20715482
TOT_030000292	mRNA	TOT_030000292	NC_025262.1	626917	627669	D	TOT_030000292	<626917..>627669	Theileria orientalis strain Shintoku	20715483
TOT_030000293	mRNA	TOT_030000293	NC_025262.1	627775	628533	D	TOT_030000293	join(<627775..627822,627865..628009,628049..628160,628196..628310,628447..>628533)	Theileria orientalis strain Shintoku	20715484
TOT_030000294	mRNA	TOT_030000294	NC_025262.1	628519	631446	R	TOT_030000294	complement(join(<628519..628802,628933..629130,629294..629459,629520..629533,629576..629728,629815..629974,630077..630874,630906..631191,631231..631349,631387..>631446))	Theileria orientalis strain Shintoku	20715485
TOT_030000295	mRNA	TOT_030000295	NC_025262.1	631880	634933	D	TOT_030000295	join(<631880..631973,632005..632403,632435..632805,632846..632913,633136..633457,633538..633639,633725..633991,634106..634178,634183..634540,634615..634695,634834..>634933)	Theileria orientalis strain Shintoku	20715486
TOT_030000296	mRNA	TOT_030000296	NC_025262.1	635086	636313	R	TOT_030000296	complement(join(<635086..635318,635349..635429,635507..635751,635784..635833,635864..635947,636023..>636313))	Theileria orientalis strain Shintoku	20715487
TOT_030000297	mRNA	TOT_030000297	NC_025262.1	636484	637812	D	TOT_030000297	join(<636484..636534,636568..636623,636681..636796,636827..636989,637100..637425,637459..637526,637564..>637812)	Theileria orientalis strain Shintoku	20715488
TOT_030000298	mRNA	TOT_030000298	NC_025262.1	638014	640111	D	TOT_030000298	join(<638014..638271,638312..638355,638389..638482,638512..638577,638630..638758,638793..638872,638915..639114,639167..639258,639297..639461,639502..639624,639715..639828,639860..639984,640018..>640111)	Theileria orientalis strain Shintoku	20715489
TOT_030000299	mRNA	TOT_030000299	NC_025262.1	640175	640512	R	TOT_030000299	complement(join(<640175..640269,640305..>640512))	Theileria orientalis strain Shintoku	20715490
TOT_030000300	mRNA	TOT_030000300	NC_025262.1	640608	641222	D	TOT_030000300	<640608..>641222	Theileria orientalis strain Shintoku	20715491
TOT_030000301	mRNA	TOT_030000301	NC_025262.1	641289	642073	R	TOT_030000301	complement(join(<641289..641975,642008..>642073))	Theileria orientalis strain Shintoku	20715492
TOT_030000302	mRNA	TOT_030000302	NC_025262.1	642190	643258	D	TOT_030000302	join(<642190..642284,642324..642636,642683..642868,642937..642985,643025..643173,643226..>643258)	Theileria orientalis strain Shintoku	20715493
TOT_030000303	mRNA	TOT_030000303	NC_025262.1	643389	645689	R	TOT_030000303	complement(join(<643389..643535,643585..643679,643711..643747,643780..643891,643925..644006,644228..644498,644564..645129,645188..>645689))	Theileria orientalis strain Shintoku	20715494
TOT_030000304	mRNA	TOT_030000304	NC_025262.1	645826	646346	D	TOT_030000304	join(<645826..646050,646099..646212,646254..>646346)	Theileria orientalis strain Shintoku	20715495
TOT_030000910	mRNA	TOT_030000910	NC_025262.1	646589	647300	D	TOT_030000910	join(<646589..646673,646712..646776,646815..>647300)	Theileria orientalis strain Shintoku	20716047
TOT_030000306	mRNA	TOT_030000306	NC_025262.1	647333	648608	R	TOT_030000306	complement(join(<647333..647438,647620..647693,647724..>648608))	Theileria orientalis strain Shintoku	20715496
TOT_030000307	mRNA	TOT_030000307	NC_025262.1	648860	651938	R	TOT_030000307	complement(join(<648860..648937,648967..649044,649075..649394,649407..649545,649735..650105,650138..650240,650271..651731,651777..>651938))	Theileria orientalis strain Shintoku	20715497
TOT_030000308	mRNA	TOT_030000308	NC_025262.1	652154	653491	R	TOT_030000308	complement(join(<652154..652854,652993..>653491))	Theileria orientalis strain Shintoku	20715498
TOT_030000309	mRNA	TOT_030000309	NC_025262.1	653704	654801	R	TOT_030000309	complement(join(<653704..654101,654164..654354,654386..654440,654472..654621,654663..>654801))	Theileria orientalis strain Shintoku	20715499
TOT_030000310	mRNA	TOT_030000310	NC_025262.1	655158	656524	R	TOT_030000310	complement(join(<655158..655419,655474..655742,655778..655939,656021..656095,656159..>656524))	Theileria orientalis strain Shintoku	20715500
TOT_030000311	mRNA	TOT_030000311	NC_025262.1	656597	658184	R	TOT_030000311	complement(join(<656597..656748,656824..657267,657439..657517,657548..657652,657684..657872,657966..>658184))	Theileria orientalis strain Shintoku	20715501
TOT_030000312	mRNA	TOT_030000312	NC_025262.1	658460	659067	R	TOT_030000312	complement(join(<658460..658524,658587..658779,658819..658917,659062..>659067))	Theileria orientalis strain Shintoku	20715502
TOT_030000313	mRNA	TOT_030000313	NC_025262.1	659353	662714	D	TOT_030000313	join(<659353..660120,660203..660761,660794..660942,661065..661220,661432..661610,661877..662097,662142..662233,662324..662522,662554..>662714)	Theileria orientalis strain Shintoku	20715503
TOT_030000314	mRNA	TOT_030000314	NC_025262.1	662802	665577	D	TOT_030000314	join(<662802..663752,663782..663881,663887..>665577)	Theileria orientalis strain Shintoku	20715504
TOT_030000911	mRNA	TOT_030000911	NC_025262.1	665975	669031	D	TOT_030000911	join(<665975..666668,666759..>669031)	Theileria orientalis strain Shintoku	20716048
TOT_030000316	mRNA	TOT_030000316	NC_025262.1	669262	670996	R	TOT_030000316	complement(join(<669262..669663,669820..669945,669999..670180,670260..670337,670378..670545,670576..>670996))	Theileria orientalis strain Shintoku	20715505
TOT_030000317	mRNA	TOT_030000317	NC_025262.1	671100	671427	R	TOT_030000317	complement(join(<671100..671242,671274..>671427))	Theileria orientalis strain Shintoku	20715506
TOT_030000318	mRNA	TOT_030000318	NC_025262.1	672118	673146	R	TOT_030000318	complement(join(<672118..672258,672362..672469,672499..672660,672691..672752,672784..672842,672910..673000,673035..>673146))	Theileria orientalis strain Shintoku	20715507
TOT_030000319	mRNA	TOT_030000319	NC_025262.1	673374	675187	R	TOT_030000319	complement(join(<673374..673907,673939..673976,674009..674068,674112..674228,674262..674384,674415..674559,674641..674958,674993..675126,675163..>675187))	Theileria orientalis strain Shintoku	20715508
TOT_030000320	mRNA	TOT_030000320	NC_025262.1	675297	675953	D	TOT_030000320	<675297..>675953	Theileria orientalis strain Shintoku	20715509
TOT_030000321	mRNA	TOT_030000321	NC_025262.1	677131	678969	D	TOT_030000321	<677131..>678969	Theileria orientalis strain Shintoku	20715510
TOT_030000322	mRNA	TOT_030000322	NC_025262.1	679019	679174	R	TOT_030000322	complement(<679019..>679174)	Theileria orientalis strain Shintoku	20715511
TOT_030000912	mRNA	TOT_030000912	NC_025262.1	679451	680108	D	TOT_030000912	join(<679451..679739,679899..680017,680052..>680108)	Theileria orientalis strain Shintoku	20716049
TOT_030000324	mRNA	TOT_030000324	NC_025262.1	680681	683314	R	TOT_030000324	complement(<680681..>683314)	Theileria orientalis strain Shintoku	20715512
TOT_030000325	mRNA	TOT_030000325	NC_025262.1	683988	686858	R	TOT_030000325	complement(join(<683988..684101,684136..684280,684314..684565,684734..684810,684842..684943,684979..685357,685389..685559,685595..686103,686189..686440,686472..686511,686544..686630,686661..686728,686760..>686858))	Theileria orientalis strain Shintoku	20715513
TOT_030000913	mRNA	TOT_030000913	NC_025262.1	687328	688027	R	TOT_030000913	complement(join(<687328..687427,687468..687592,687638..687751,687839..>688027))	Theileria orientalis strain Shintoku	20716050
TOT_030000327	mRNA	TOT_030000327	NC_025262.1	688442	697443	D	TOT_030000327	join(<688442..689615,689801..690934,691001..691039,691087..691157,691232..691291,691331..691623,691719..691802,692009..692775,692805..693049,693117..693383,693417..693668,693698..694098,694131..694473,694505..694662,694706..694796,694828..694899,694933..695361,695403..695614,695645..695706,695738..>697443)	Theileria orientalis strain Shintoku	20715514
TOT_030000328	mRNA	TOT_030000328	NC_025262.1	697675	698727	R	TOT_030000328	complement(<697675..>698727)	Theileria orientalis strain Shintoku	20715515
TOT_030000329	mRNA	TOT_030000329	NC_025262.1	699895	701165	D	TOT_030000329	join(<699895..700125,700160..700243,700274..701014,701058..>701165)	Theileria orientalis strain Shintoku	20715516
TOT_030000330	mRNA	TOT_030000330	NC_025262.1	701453	705208	D	TOT_030000330	join(<701453..702931,703013..703651,703718..703964,704067..>705208)	Theileria orientalis strain Shintoku	20715517
TOT_030000331	mRNA	TOT_030000331	NC_025262.1	705562	707288	D	TOT_030000331	join(<705562..705767,705809..>707288)	Theileria orientalis strain Shintoku	20715518
TOT_030000332	mRNA	TOT_030000332	NC_025262.1	707300	707955	R	TOT_030000332	complement(join(<707300..707428,707545..707748,707806..>707955))	Theileria orientalis strain Shintoku	20715519
TOT_030000333	mRNA	TOT_030000333	NC_025262.1	708436	710184	D	TOT_030000333	join(<708436..708580,708613..708735,708767..709018,709102..709721,709754..710029,710062..>710184)	Theileria orientalis strain Shintoku	20715520
TOT_030000334	mRNA	TOT_030000334	NC_025262.1	710432	711224	R	TOT_030000334	complement(join(<710432..710523,710613..710755,710797..710984,711020..711115,711150..>711224))	Theileria orientalis strain Shintoku	20715521
TOT_030000335	mRNA	TOT_030000335	NC_025262.1	712041	713861	D	TOT_030000335	join(<712041..712143,712185..712307,712339..712590,712622..713211,713452..713727,713760..>713861)	Theileria orientalis strain Shintoku	20715522
TOT_030000336	mRNA	TOT_030000336	NC_025262.1	714057	715639	D	TOT_030000336	join(<714057..714345,714376..714627,714749..715314,715346..>715639)	Theileria orientalis strain Shintoku	20715523
TOT_030000337	mRNA	TOT_030000337	NC_025262.1	716113	717960	D	TOT_030000337	join(<716113..716254,716292..716415,716524..716696,716729..716970,717160..717525,717559..717825,717856..>717960)	Theileria orientalis strain Shintoku	20715524
TOT_030000338	mRNA	TOT_030000338	NC_025262.1	718252	718970	D	TOT_030000338	join(<718252..718379,718412..>718970)	Theileria orientalis strain Shintoku	20715525
TOT_030000339	mRNA	TOT_030000339	NC_025262.1	719174	720606	D	TOT_030000339	join(<719174..719777,719882..720144,720176..720241,720276..720429,720470..>720606)	Theileria orientalis strain Shintoku	20715526
TOT_030000340	mRNA	TOT_030000340	NC_025262.1	721090	724064	D	TOT_030000340	join(<721090..721141,721176..721443,721476..721637,721727..721830,721848..722026,722062..722166,722199..722575,722696..722885,722952..723153,723184..723338,723439..723624,723659..723766,723951..>724064)	Theileria orientalis strain Shintoku	20715527
TOT_030000341	mRNA	TOT_030000341	NC_025262.1	724255	725703	R	TOT_030000341	complement(join(<724255..724322,724403..724730,724806..724940,725083..725158,725192..725541,725572..>725703))	Theileria orientalis strain Shintoku	20715528
TOT_030000342	mRNA	TOT_030000342	NC_025262.1	725893	726690	R	TOT_030000342	complement(join(<725893..725978,726010..726321,726354..726489,726523..>726690))	Theileria orientalis strain Shintoku	20715529
TOT_030000343	mRNA	TOT_030000343	NC_025262.1	728544	731637	D	TOT_030000343	join(<728544..730943,731120..731209,731240..731542,731575..>731637)	Theileria orientalis strain Shintoku	20715530
TOT_030000344	mRNA	TOT_030000344	NC_025262.1	731670	732674	R	TOT_030000344	complement(<731670..>732674)	Theileria orientalis strain Shintoku	20715531
TOT_030000345	mRNA	TOT_030000345	NC_025262.1	732787	737770	R	TOT_030000345	complement(join(<732787..733113,733148..733209,733241..733287,733554..734419,734450..735113,735366..735868,735905..737482,737636..>737770))	Theileria orientalis strain Shintoku	20715532
TOT_030000914	mRNA	TOT_030000914	NC_025262.1	738263	742679	D	TOT_030000914	join(<738263..738405,738435..738729,738762..738907,738938..739067,739098..739165,739201..739294,739325..739419,739450..739673,739803..740784,740827..740962,740993..741572,741655..741947,741980..742262,742293..742468,742499..742578,742616..>742679)	Theileria orientalis strain Shintoku	20716051
TOT_030000349	mRNA	TOT_030000349	NC_025262.1	743006	745925	R	TOT_030000349	complement(join(<743006..744197,744403..745651,745715..>745925))	Theileria orientalis strain Shintoku	20715533
TOT_030000350	mRNA	TOT_030000350	NC_025262.1	746611	746910	R	TOT_030000350	complement(<746611..>746910)	Theileria orientalis strain Shintoku	20715534
TOT_030000351	mRNA	TOT_030000351	NC_025262.1	747205	748241	R	TOT_030000351	complement(join(<747205..747441,747484..747986,748018..748085,748141..>748241))	Theileria orientalis strain Shintoku	20715535
TOT_030000915	mRNA	TOT_030000915	NC_025262.1	748565	751114	D	TOT_030000915	join(<748565..749533,749565..749655,749685..749869,749901..750047,750247..750657,750815..>751114)	Theileria orientalis strain Shintoku	20716052
TOT_030000916	mRNA	TOT_030000916	NC_025262.1	751437	753011	D	TOT_030000916	join(<751437..751572,751624..>753011)	Theileria orientalis strain Shintoku	20716053
TOT_030000917	mRNA	TOT_030000917	NC_025262.1	753267	759136	R	TOT_030000917	complement(join(<753267..753544,753887..755369,755410..755638,755815..755944,755976..756383,756416..756568,756667..757680,757765..>759136))	Theileria orientalis strain Shintoku	20716054
TOT_030000355	mRNA	TOT_030000355	NC_025262.1	759877	762018	D	TOT_030000355	<759877..>762018	Theileria orientalis strain Shintoku	20715536
TOT_030000356	mRNA	TOT_030000356	NC_025262.1	762237	765089	R	TOT_030000356	complement(<762237..>765089)	Theileria orientalis strain Shintoku	20715537
TOT_030000357	mRNA	TOT_030000357	NC_025262.1	765273	766379	D	TOT_030000357	<765273..>766379	Theileria orientalis strain Shintoku	20715538
TOT_030000358	mRNA	TOT_030000358	NC_025262.1	766508	766991	R	TOT_030000358	complement(join(<766508..766634,766742..766811,766868..>766991))	Theileria orientalis strain Shintoku	20715539
TOT_030000359	mRNA	TOT_030000359	NC_025262.1	767469	772418	D	TOT_030000359	join(<767469..769615,769697..771027,771070..771087,771214..>772418)	Theileria orientalis strain Shintoku	20715540
TOT_030000360	mRNA	TOT_030000360	NC_025262.1	778574	781202	R	TOT_030000360	complement(join(<778574..778748,778782..779095,779127..779214,779297..779946,780046..780307,780351..780643,780688..780822,780854..780927,780957..781043,781076..>781202))	Theileria orientalis strain Shintoku	20715541
TOT_030000361	mRNA	TOT_030000361	NC_025262.1	781654	784952	D	TOT_030000361	join(<781654..782430,782581..782869,783073..783357,783388..783942,784030..784098,784169..784420,784536..784851,784889..>784952)	Theileria orientalis strain Shintoku	20715542
TOT_030000362	mRNA	TOT_030000362	NC_025262.1	785028	787647	R	TOT_030000362	complement(join(<785028..785089,785265..785751,785785..786032,786145..786385,786448..786501,786572..786684,786778..786857,786937..787042,787124..787315,787413..>787647))	Theileria orientalis strain Shintoku	20715543
TOT_030000363	mRNA	TOT_030000363	NC_025262.1	787756	788261	R	TOT_030000363	complement(join(<787756..787927,787999..>788261))	Theileria orientalis strain Shintoku	20715544
TOT_030000364	mRNA	TOT_030000364	NC_025262.1	788577	789363	D	TOT_030000364	join(<788577..788985,789020..789148,789203..>789363)	Theileria orientalis strain Shintoku	20715545
TOT_030000365	mRNA	TOT_030000365	NC_025262.1	789360	789863	R	TOT_030000365	complement(<789360..>789863)	Theileria orientalis strain Shintoku	20715546
TOT_030000366	mRNA	TOT_030000366	NC_025262.1	789951	790841	D	TOT_030000366	join(<789951..790024,790197..790491,790626..>790841)	Theileria orientalis strain Shintoku	20715547
TOT_030000367	mRNA	TOT_030000367	NC_025262.1	790967	791077	R	TOT_030000367	complement(<790967..>791077)	Theileria orientalis strain Shintoku	20715548
TOT_030000368	mRNA	TOT_030000368	NC_025262.1	791083	796274	R	TOT_030000368	complement(join(<791083..791776,792745..793521,793555..793986,794038..794128,794295..794836,794957..795093,795160..795304,795365..795492,795557..795764,795803..795900,795942..796058,796125..>796274))	Theileria orientalis strain Shintoku	20715549
TOT_030000369	mRNA	TOT_030000369	NC_025262.1	796621	797815	D	TOT_030000369	join(<796621..796861,796893..797069,797107..797216,797246..797386,797504..>797815)	Theileria orientalis strain Shintoku	20715550
TOT_030000370	mRNA	TOT_030000370	NC_025262.1	797974	800355	R	TOT_030000370	complement(join(<797974..798141,798279..798363,798446..798713,798768..798859,798995..799155,799217..799399,799471..799561,799604..799751,799814..799925,800257..>800355))	Theileria orientalis strain Shintoku	20715551
TOT_030000371	mRNA	TOT_030000371	NC_025262.1	800499	806622	D	TOT_030000371	join(<800499..800537,800739..800975,801005..801660,801736..802076,802253..803288,803337..805416,805558..>806622)	Theileria orientalis strain Shintoku	20715552
TOT_030000372	mRNA	TOT_030000372	NC_025262.1	806858	811477	R	TOT_030000372	complement(join(<806858..807051,807289..809349,809593..810350,810423..810627,810695..811115,811208..811385,811422..>811477))	Theileria orientalis strain Shintoku	20715553
TOT_030000373	mRNA	TOT_030000373	NC_025262.1	812027	814559	D	TOT_030000373	join(<812027..812111,812449..>814559)	Theileria orientalis strain Shintoku	20715554
TOT_030000374	mRNA	TOT_030000374	NC_025262.1	814916	815298	D	TOT_030000374	join(<814916..815017,815047..>815298)	Theileria orientalis strain Shintoku	20715555
TOT_030000375	mRNA	TOT_030000375	NC_025262.1	815417	816561	R	TOT_030000375	complement(join(<815417..815544,815643..815798,815840..815930,816054..816237,816270..816351,816386..816496,816531..>816561))	Theileria orientalis strain Shintoku	20715556
TOT_030000376	mRNA	TOT_030000376	NC_025262.1	816797	822023	D	TOT_030000376	join(<816797..816846,816905..817633,817676..818166,818344..819202,819893..>822023)	Theileria orientalis strain Shintoku	20715557
TOT_030000377	mRNA	TOT_030000377	NC_025262.1	822225	822631	R	TOT_030000377	complement(join(<822225..822299,822382..822518,822529..>822631))	Theileria orientalis strain Shintoku	20715558
TOT_030000378	mRNA	TOT_030000378	NC_025262.1	822760	823124	D	TOT_030000378	join(<822760..822884,822920..>823124)	Theileria orientalis strain Shintoku	20715559
TOT_030000379	mRNA	TOT_030000379	NC_025262.1	823277	826106	R	TOT_030000379	complement(join(<823277..823726,823960..824071,824293..824383,824451..824617,824784..825235,825329..825508,825565..825728,825803..>826106))	Theileria orientalis strain Shintoku	20715560
TOT_030000380	mRNA	TOT_030000380	NC_025262.1	826277	826378	D	TOT_030000380	<826277..>826378	Theileria orientalis strain Shintoku	20715561
TOT_030000381	mRNA	TOT_030000381	NC_025262.1	826943	827224	D	TOT_030000381	<826943..>827224	Theileria orientalis strain Shintoku	20715562
TOT_030000918	mRNA	TOT_030000918	NC_025262.1	827724	828841	R	TOT_030000918	complement(join(<827724..827798,827902..827984,828044..828143,828199..828282,828314..828537,828598..>828841))	Theileria orientalis strain Shintoku	20716055
TOT_030000383	mRNA	TOT_030000383	NC_025262.1	829075	832809	D	TOT_030000383	join(<829075..829308,829340..829558,829591..831451,831683..832112,832194..>832809)	Theileria orientalis strain Shintoku	20715563
TOT_030000384	mRNA	TOT_030000384	NC_025262.1	833226	839024	D	TOT_030000384	<833226..>839024	Theileria orientalis strain Shintoku	20715564
TOT_030000385	mRNA	TOT_030000385	NC_025262.1	839215	841824	D	TOT_030000385	join(<839215..840970,841028..>841824)	Theileria orientalis strain Shintoku	20715565
TOT_030000386	mRNA	TOT_030000386	NC_025262.1	842005	843352	R	TOT_030000386	complement(join(<842005..842204,842234..842291,842342..842378,842410..842474,842592..842882,842913..842951,843350..>843352))	Theileria orientalis strain Shintoku	20715566
TOT_030000387	mRNA	TOT_030000387	NC_025262.1	843728	845353	D	TOT_030000387	join(<843728..844389,844504..>845353)	Theileria orientalis strain Shintoku	20715567
TOT_030000388	mRNA	TOT_030000388	NC_025262.1	845564	848285	R	TOT_030000388	complement(join(<845564..845580,845903..848170,848234..>848285))	Theileria orientalis strain Shintoku	20715568
TOT_030000389	mRNA	TOT_030000389	NC_025262.1	849021	849674	D	TOT_030000389	<849021..>849674	Theileria orientalis strain Shintoku	20715569
TOT_030000390	mRNA	TOT_030000390	NC_025262.1	849781	852950	D	TOT_030000390	join(<849781..850697,850928..851665,851904..852790,852853..>852950)	Theileria orientalis strain Shintoku	20715570
TOT_030000391	mRNA	TOT_030000391	NC_025262.1	853156	854771	D	TOT_030000391	join(<853156..853814,853880..>854771)	Theileria orientalis strain Shintoku	20715571
TOT_030000392	mRNA	TOT_030000392	NC_025262.1	855074	857339	R	TOT_030000392	complement(join(<855074..855191,855266..855408,855444..855555,855700..856626,856737..856854,856886..857031,857062..>857339))	Theileria orientalis strain Shintoku	20715572
TOT_030000393	mRNA	TOT_030000393	NC_025262.1	858296	861514	D	TOT_030000393	join(<858296..858878,859071..>861514)	Theileria orientalis strain Shintoku	20715573
TOT_030000394	mRNA	TOT_030000394	NC_025262.1	861542	861842	D	TOT_030000394	join(<861542..861612,861692..>861842)	Theileria orientalis strain Shintoku	20715574
TOT_030000395	mRNA	TOT_030000395	NC_025262.1	861983	862957	D	TOT_030000395	<861983..>862957	Theileria orientalis strain Shintoku	20715575
TOT_030000396	mRNA	TOT_030000396	NC_025262.1	863230	865145	R	TOT_030000396	complement(join(<863230..863818,864021..864411,864497..>865145))	Theileria orientalis strain Shintoku	20715576
TOT_030000397	mRNA	TOT_030000397	NC_025262.1	865148	865652	R	TOT_030000397	complement(join(<865148..865271,865310..865441,865549..>865652))	Theileria orientalis strain Shintoku	20715577
TOT_030000398	mRNA	TOT_030000398	NC_025262.1	865819	866843	R	TOT_030000398	complement(join(<865819..866225,866283..866332,866386..>866843))	Theileria orientalis strain Shintoku	20715578
TOT_030000399	mRNA	TOT_030000399	NC_025262.1	867180	868603	D	TOT_030000399	join(<867180..867426,867458..867559,867590..867624,867657..867935,867979..868075,868106..868244,868276..>868603)	Theileria orientalis strain Shintoku	20715579
TOT_030000400	mRNA	TOT_030000400	NC_025262.1	868648	868752	D	TOT_030000400	<868648..>868752	Theileria orientalis strain Shintoku	20715580
TOT_030000401	mRNA	TOT_030000401	NC_025262.1	868983	870918	D	TOT_030000401	join(<868983..869282,869314..869494,869525..869733,869765..869864,869979..870070,870101..870189,870390..>870918)	Theileria orientalis strain Shintoku	20715581
TOT_030000919	mRNA	TOT_030000919	NC_025262.1	871018	872524	D	TOT_030000919	join(<871018..871048,871095..871203,871247..871362,871394..871473,871688..871858,872007..872336,872405..>872524)	Theileria orientalis strain Shintoku	20716056
TOT_030000403	mRNA	TOT_030000403	NC_025262.1	872653	876240	D	TOT_030000403	join(<872653..872755,872802..872867,872952..873047,873137..873666,873817..>876240)	Theileria orientalis strain Shintoku	20715582
TOT_030000404	mRNA	TOT_030000404	NC_025262.1	876969	881176	R	TOT_030000404	complement(join(<876969..878578,878718..878912,879039..880738,880905..>881176))	Theileria orientalis strain Shintoku	20715583
TOT_030000405	mRNA	TOT_030000405	NC_025262.1	881414	882280	D	TOT_030000405	join(<881414..881453,881513..881948,882016..882049,882140..>882280)	Theileria orientalis strain Shintoku	20715584
TOT_030000406	mRNA	TOT_030000406	NC_025262.1	882594	883484	R	TOT_030000406	complement(join(<882594..882691,882804..882951,883041..883110,883318..883421,883461..>883484))	Theileria orientalis strain Shintoku	20715585
TOT_030000407	mRNA	TOT_030000407	NC_025262.1	884249	885526	D	TOT_030000407	join(<884249..884297,884386..884453,884497..884637,884669..885112,885258..885314,885407..>885526)	Theileria orientalis strain Shintoku	20715586
TOT_030000408	mRNA	TOT_030000408	NC_025262.1	885737	886775	D	TOT_030000408	join(<885737..885815,886010..886357,886482..886683,886715..>886775)	Theileria orientalis strain Shintoku	20715587
TOT_030000409	mRNA	TOT_030000409	NC_025262.1	886950	888337	R	TOT_030000409	complement(join(<886950..887120,887278..887334,887452..887732,887798..887953,888175..>888337))	Theileria orientalis strain Shintoku	20715588
TOT_030000410	mRNA	TOT_030000410	NC_025262.1	888656	889227	D	TOT_030000410	join(<888656..888845,888883..888950,888982..>889227)	Theileria orientalis strain Shintoku	20715589
TOT_030000411	mRNA	TOT_030000411	NC_025262.1	889473	891514	D	TOT_030000411	join(<889473..889623,889772..889890,889936..890417,890539..890721,890839..891004,891075..891219,891314..891393,891452..>891514)	Theileria orientalis strain Shintoku	20715590
TOT_030000412	mRNA	TOT_030000412	NC_025262.1	891771	892597	R	TOT_030000412	complement(join(<891771..892318,892450..>892597))	Theileria orientalis strain Shintoku	20715591
TOT_030000413	mRNA	TOT_030000413	NC_025262.1	892792	894099	R	TOT_030000413	complement(<892792..>894099)	Theileria orientalis strain Shintoku	20715592
TOT_030000414	mRNA	TOT_030000414	NC_025262.1	894405	894620	R	TOT_030000414	complement(<894405..>894620)	Theileria orientalis strain Shintoku	20715593
TOT_030000415	mRNA	TOT_030000415	NC_025262.1	894773	897053	R	TOT_030000415	complement(join(<894773..894922,894954..895228,895370..>897053))	Theileria orientalis strain Shintoku	20715594
TOT_030000416	mRNA	TOT_030000416	NC_025262.1	897581	900265	R	TOT_030000416	complement(join(<897581..897906,897963..899204,899356..>900265))	Theileria orientalis strain Shintoku	20715595
TOT_030000417	mRNA	TOT_030000417	NC_025262.1	900953	901090	R	TOT_030000417	complement(<900953..>901090)	Theileria orientalis strain Shintoku	20715596
TOT_030000418	mRNA	TOT_030000418	NC_025262.1	901333	902542	D	TOT_030000418	join(<901333..901341,902177..902284,902347..902377,902418..>902542)	Theileria orientalis strain Shintoku	20715597
TOT_030000419	mRNA	TOT_030000419	NC_025262.1	902746	905164	D	TOT_030000419	join(<902746..902829,902896..903049,903081..903217,903249..903323,903354..903850,903950..904182,904215..904273,904430..904627,904724..904784,905010..>905164)	Theileria orientalis strain Shintoku	20715598
TOT_030000420	mRNA	TOT_030000420	NC_025262.1	905230	906096	R	TOT_030000420	complement(join(<905230..905384,905508..905685,905725..>906096))	Theileria orientalis strain Shintoku	20715599
TOT_030000421	mRNA	TOT_030000421	NC_025262.1	906302	908481	D	TOT_030000421	join(<906302..906481,906576..907231,907263..907359,907405..907684,907979..>908481)	Theileria orientalis strain Shintoku	20715600
TOT_030000422	mRNA	TOT_030000422	NC_025262.1	908589	910389	R	TOT_030000422	complement(join(<908589..908640,908670..908728,908974..909038,909114..909171,909261..909332,909401..909466,909530..909631,909736..909891,909915..910038,910068..910174,910255..>910389))	Theileria orientalis strain Shintoku	20715601
TOT_030000423	mRNA	TOT_030000423	NC_025262.1	910560	911975	R	TOT_030000423	complement(join(<910560..910751,910868..910944,911008..911094,911177..911376,911438..911522,911606..911881,911963..>911975))	Theileria orientalis strain Shintoku	20715602
TOT_030000424	mRNA	TOT_030000424	NC_025262.1	912154	913556	D	TOT_030000424	join(<912154..912287,912430..912760,912791..912977,913009..>913556)	Theileria orientalis strain Shintoku	20715603
TOT_030000425	mRNA	TOT_030000425	NC_025262.1	913716	914501	D	TOT_030000425	join(<913716..913849,913952..914059,914102..914256,914347..>914501)	Theileria orientalis strain Shintoku	20715604
TOT_030000426	mRNA	TOT_030000426	NC_025262.1	914925	915128	D	TOT_030000426	<914925..>915128	Theileria orientalis strain Shintoku	20715605
TOT_030000427	mRNA	TOT_030000427	NC_025262.1	915391	917542	R	TOT_030000427	complement(join(<915391..915835,916163..916579,916653..916739,916798..916900,916956..917040,917131..917345,917449..>917542))	Theileria orientalis strain Shintoku	20715606
TOT_030000428	mRNA	TOT_030000428	NC_025262.1	917992	919158	D	TOT_030000428	join(<917992..918220,918262..918865,918897..>919158)	Theileria orientalis strain Shintoku	20715607
TOT_030000429	mRNA	TOT_030000429	NC_025262.1	919352	921891	R	TOT_030000429	complement(join(<919352..919479,919532..919627,919711..919801,919948..920041,920196..920218,920343..920397,920448..920500,920531..920714,920965..921161,921192..921351,921429..921570,921601..921690,921735..>921891))	Theileria orientalis strain Shintoku	20715608
TOT_030000430	mRNA	TOT_030000430	NC_025262.1	922085	923212	D	TOT_030000430	join(<922085..922187,922230..922324,922355..922401,922434..922526,922584..922714,922745..922884,922916..>923212)	Theileria orientalis strain Shintoku	20715609
TOT_030000431	mRNA	TOT_030000431	NC_025262.1	923554	924437	R	TOT_030000431	complement(join(<923554..923650,923763..923879,923950..924092,924303..>924437))	Theileria orientalis strain Shintoku	20715610
TOT_030000432	mRNA	TOT_030000432	NC_025262.1	924977	926895	R	TOT_030000432	complement(join(<924977..926188,926343..926541,926705..>926895))	Theileria orientalis strain Shintoku	20715611
TOT_030000433	mRNA	TOT_030000433	NC_025262.1	927646	928476	D	TOT_030000433	join(<927646..927984,928015..>928476)	Theileria orientalis strain Shintoku	20715612
TOT_030000434	mRNA	TOT_030000434	NC_025262.1	928581	928999	R	TOT_030000434	complement(join(<928581..928665,928697..928865,928969..>928999))	Theileria orientalis strain Shintoku	20715613
TOT_030000435	mRNA	TOT_030000435	NC_025262.1	929324	930831	R	TOT_030000435	complement(join(<929324..929835,929890..930174,930252..930504,930536..930683,930758..>930831))	Theileria orientalis strain Shintoku	20715614
TOT_030000436	mRNA	TOT_030000436	NC_025262.1	931550	934960	D	TOT_030000436	join(<931550..933364,933485..933832,934058..>934960)	Theileria orientalis strain Shintoku	20715615
TOT_030000437	mRNA	TOT_030000437	NC_025262.1	935070	935984	R	TOT_030000437	complement(join(<935070..935114,935244..935434,935614..935774,935806..>935984))	Theileria orientalis strain Shintoku	20715616
TOT_030000438	mRNA	TOT_030000438	NC_025262.1	936505	936624	R	TOT_030000438	complement(<936505..>936624)	Theileria orientalis strain Shintoku	20715617
TOT_030000439	mRNA	TOT_030000439	NC_025262.1	937015	939018	D	TOT_030000439	<937015..>939018	Theileria orientalis strain Shintoku	20715618
TOT_030000440	mRNA	TOT_030000440	NC_025262.1	939256	940685	D	TOT_030000440	join(<939256..939309,939376..939478,939708..939778,939858..940052,940149..940369,940411..940482,940514..>940685)	Theileria orientalis strain Shintoku	20715619
TOT_030000441	mRNA	TOT_030000441	NC_025262.1	940783	941511	R	TOT_030000441	complement(join(<940783..940865,940895..940967,940998..941191,941334..>941511))	Theileria orientalis strain Shintoku	20715620
TOT_030000442	mRNA	TOT_030000442	NC_025262.1	942042	944001	D	TOT_030000442	join(<942042..942748,942836..943237,943408..943555,943741..>944001)	Theileria orientalis strain Shintoku	20715621
TOT_030000443	mRNA	TOT_030000443	NC_025262.1	944291	948360	R	TOT_030000443	complement(join(<944291..944977,945018..945060,945159..946168,946302..946555,946677..947236,947318..947808,948055..>948360))	Theileria orientalis strain Shintoku	20715622
TOT_030000444	mRNA	TOT_030000444	NC_025262.1	948589	949897	D	TOT_030000444	join(<948589..949627,949662..>949897)	Theileria orientalis strain Shintoku	20715623
TOT_030000445	mRNA	TOT_030000445	NC_025262.1	950117	950938	R	TOT_030000445	complement(<950117..>950938)	Theileria orientalis strain Shintoku	20715624
TOT_030000920	mRNA	TOT_030000920	NC_025262.1	951153	953067	R	TOT_030000920	complement(join(<951153..951767,951798..951971,952072..952233,952304..952530,952860..>953067))	Theileria orientalis strain Shintoku	20716057
TOT_030000447	mRNA	TOT_030000447	NC_025262.1	953625	957023	R	TOT_030000447	complement(join(<953625..954054,954124..>957023))	Theileria orientalis strain Shintoku	20715625
TOT_030000448	mRNA	TOT_030000448	NC_025262.1	957056	957290	R	TOT_030000448	complement(join(<957056..957118,957219..>957290))	Theileria orientalis strain Shintoku	20715626
TOT_030000449	mRNA	TOT_030000449	NC_025262.1	957726	958675	R	TOT_030000449	complement(join(<957726..957886,957968..958051,958138..958221,958253..958402,958476..958640,958672..>958675))	Theileria orientalis strain Shintoku	20715627
TOT_030000450	mRNA	TOT_030000450	NC_025262.1	959829	965135	D	TOT_030000450	join(<959829..962791,962891..>965135)	Theileria orientalis strain Shintoku	20715628
TOT_030000451	mRNA	TOT_030000451	NC_025262.1	965405	966100	D	TOT_030000451	join(<965405..966051,966082..>966100)	Theileria orientalis strain Shintoku	20715629
TOT_030000452	mRNA	TOT_030000452	NC_025262.1	966334	967299	R	TOT_030000452	complement(join(<966334..966420,966510..966588,966733..967000,967191..>967299))	Theileria orientalis strain Shintoku	20715630
TOT_030000453	mRNA	TOT_030000453	NC_025262.1	967418	967977	R	TOT_030000453	complement(join(<967418..967499,967533..967879,967945..>967977))	Theileria orientalis strain Shintoku	20715631
TOT_030000454	mRNA	TOT_030000454	NC_025262.1	968206	970673	R	TOT_030000454	complement(join(<968206..970540,970606..>970673))	Theileria orientalis strain Shintoku	20715632
TOT_030000455	mRNA	TOT_030000455	NC_025262.1	970957	971807	R	TOT_030000455	complement(join(<970957..971316,971386..971566,971641..971725,971768..>971807))	Theileria orientalis strain Shintoku	20715633
TOT_030000456	mRNA	TOT_030000456	NC_025262.1	972069	976131	D	TOT_030000456	join(<972069..973771,973903..975259,975460..975581,975669..975759,975841..>976131)	Theileria orientalis strain Shintoku	20715634
TOT_030000457	mRNA	TOT_030000457	NC_025262.1	976287	980495	R	TOT_030000457	complement(join(<976287..976473,976701..976854,977047..978345,978457..978594,978739..979420,979488..>980495))	Theileria orientalis strain Shintoku	20715635
TOT_030000458	mRNA	TOT_030000458	NC_025262.1	980828	986712	D	TOT_030000458	join(<980828..981553,981596..981815,981870..981887,981948..982412,982833..983220,983428..985712,985943..986211,986455..>986712)	Theileria orientalis strain Shintoku	20715636
TOT_030000459	mRNA	TOT_030000459	NC_025262.1	986789	987008	D	TOT_030000459	join(<986789..986912,986929..>987008)	Theileria orientalis strain Shintoku	20715637
TOT_030000460	mRNA	TOT_030000460	NC_025262.1	987024	988859	R	TOT_030000460	complement(join(<987024..987362,987616..988362,988506..>988859))	Theileria orientalis strain Shintoku	20715638
TOT_030000461	mRNA	TOT_030000461	NC_025262.1	989120	990358	R	TOT_030000461	complement(<989120..>990358)	Theileria orientalis strain Shintoku	20715639
TOT_030000462	mRNA	TOT_030000462	NC_025262.1	990729	991493	D	TOT_030000462	join(<990729..991108,991142..>991493)	Theileria orientalis strain Shintoku	20715640
TOT_030000463	mRNA	TOT_030000463	NC_025262.1	991612	992485	R	TOT_030000463	complement(join(<991612..991693,991725..991795,991868..991954,992031..992101,992143..>992485))	Theileria orientalis strain Shintoku	20715641
TOT_030000464	mRNA	TOT_030000464	NC_025262.1	992791	994968	D	TOT_030000464	join(<992791..992910,992944..993211,993263..993434,993546..993781,993814..993915,994123..994239,994282..994418,994455..994540,994574..994700,994810..>994968)	Theileria orientalis strain Shintoku	20715642
TOT_030000465	mRNA	TOT_030000465	NC_025262.1	995163	995672	D	TOT_030000465	join(<995163..995219,995334..995423,995535..>995672)	Theileria orientalis strain Shintoku	20715643
TOT_030000466	mRNA	TOT_030000466	NC_025262.1	996006	999074	D	TOT_030000466	join(<996006..997684,997882..998242,998364..998450,998523..998627,998812..998838,998871..>999074)	Theileria orientalis strain Shintoku	20715644
TOT_030000467	mRNA	TOT_030000467	NC_025262.1	999722	1000693	D	TOT_030000467	join(<999722..1000427,1000494..1000541,1000611..>1000693)	Theileria orientalis strain Shintoku	20715645
TOT_030000468	mRNA	TOT_030000468	NC_025262.1	1000620	1002852	R	TOT_030000468	complement(join(<1000620..1000718,1000817..1002506,1002540..1002640,1002712..>1002852))	Theileria orientalis strain Shintoku	20715646
TOT_030000921	mRNA	TOT_030000921	NC_025262.1	1003453	1004603	D	TOT_030000921	join(<1003453..1003486,1003518..1003603,1003665..1004120,1004232..1004389,1004519..>1004603)	Theileria orientalis strain Shintoku	20716058
TOT_030000470	mRNA	TOT_030000470	NC_025262.1	1004675	1009932	R	TOT_030000470	complement(join(<1004675..1004905,1004947..1005080,1005148..1005421,1005519..1005694,1005780..1005976,1006029..1006110,1006214..1006500,1006595..1006638,1006679..1007296,1007368..1007975,1008006..1008192,1008265..1008348,1008390..1008526,1008609..1008711,1008748..1009029,1009060..1009138,1009168..1009289,1009341..1009497,1009528..1009607,1009637..1009702,1009750..1009863,1009903..>1009932))	Theileria orientalis strain Shintoku	20715647
TOT_030000471	mRNA	TOT_030000471	NC_025262.1	1010198	1013395	D	TOT_030000471	join(<1010198..1011974,1012020..1012770,1012864..>1013395)	Theileria orientalis strain Shintoku	20715648
TOT_030000472	mRNA	TOT_030000472	NC_025262.1	1013598	1013927	R	TOT_030000472	complement(<1013598..>1013927)	Theileria orientalis strain Shintoku	20715649
TOT_030000473	mRNA	TOT_030000473	NC_025262.1	1014015	1014173	R	TOT_030000473	complement(<1014015..>1014173)	Theileria orientalis strain Shintoku	20715650
TOT_030000474	mRNA	TOT_030000474	NC_025262.1	1014535	1019464	D	TOT_030000474	join(<1014535..1015905,1015969..1016985,1017109..1017611,1017798..1018457,1018742..1019072,1019245..1019311,1019394..>1019464)	Theileria orientalis strain Shintoku	20715651
TOT_030000475	mRNA	TOT_030000475	NC_025262.1	1019542	1021104	D	TOT_030000475	<1019542..>1021104	Theileria orientalis strain Shintoku	20715652
TOT_030000476	mRNA	TOT_030000476	NC_025262.1	1021694	1026685	R	TOT_030000476	complement(join(<1021694..1021751,1021828..1022438,1022480..1022532,1022581..>1026685))	Theileria orientalis strain Shintoku	20715653
TOT_030000477	mRNA	TOT_030000477	NC_025262.1	1027083	1029279	D	TOT_030000477	join(<1027083..1027209,1027384..1027677,1027749..1027925,1028084..1028172,1028241..1028340,1028402..1028741,1028846..1028924,1029085..>1029279)	Theileria orientalis strain Shintoku	20715654
TOT_030000922	mRNA	TOT_030000922	NC_025262.1	1029373	1031065	R	TOT_030000922	complement(join(<1029373..1029695,1030027..>1031065))	Theileria orientalis strain Shintoku	20716059
TOT_030000479	mRNA	TOT_030000479	NC_025262.1	1032007	1032705	D	TOT_030000479	join(<1032007..1032348,1032475..>1032705)	Theileria orientalis strain Shintoku	20715655
TOT_030000480	mRNA	TOT_030000480	NC_025262.1	1032837	1033388	R	TOT_030000480	complement(join(<1032837..1032989,1033148..1033258,1033368..>1033388))	Theileria orientalis strain Shintoku	20715656
TOT_030000481	mRNA	TOT_030000481	NC_025262.1	1033762	1034010	R	TOT_030000481	complement(<1033762..>1034010)	Theileria orientalis strain Shintoku	20715657
TOT_030000482	mRNA	TOT_030000482	NC_025262.1	1035076	1038461	D	TOT_030000482	join(<1035076..1038192,1038342..>1038461)	Theileria orientalis strain Shintoku	20715658
TOT_030000483	mRNA	TOT_030000483	NC_025262.1	1039364	1039966	R	TOT_030000483	complement(<1039364..>1039966)	Theileria orientalis strain Shintoku	20715659
TOT_030000484	mRNA	TOT_030000484	NC_025262.1	1041373	1041936	R	TOT_030000484	complement(<1041373..>1041936)	Theileria orientalis strain Shintoku	20715660
TOT_030000485	mRNA	TOT_030000485	NC_025262.1	1042679	1048699	R	TOT_030000485	complement(<1042679..>1048699)	Theileria orientalis strain Shintoku	20715661
TOT_030000486	mRNA	TOT_030000486	NC_025262.1	1049340	1050642	D	TOT_030000486	join(<1049340..1049970,1050059..1050204,1050283..>1050642)	Theileria orientalis strain Shintoku	20715662
TOT_030000487	mRNA	TOT_030000487	NC_025262.1	1050768	1051406	R	TOT_030000487	complement(<1050768..>1051406)	Theileria orientalis strain Shintoku	20715663
TOT_030000488	mRNA	TOT_030000488	NC_025262.1	1051606	1052174	D	TOT_030000488	join(<1051606..1051803,1051884..1052072,1052103..>1052174)	Theileria orientalis strain Shintoku	20715664
TOT_030000489	mRNA	TOT_030000489	NC_025262.1	1052334	1053629	R	TOT_030000489	complement(join(<1052334..1052416,1052448..1052505,1052561..1052634,1052699..1052776,1052861..1052914,1052946..1053020,1053053..1053121,1053158..1053223,1053267..1053408,1053528..>1053629))	Theileria orientalis strain Shintoku	20715665
TOT_030000490	mRNA	TOT_030000490	NC_025262.1	1054342	1055579	D	TOT_030000490	join(<1054342..1054469,1054545..1054666,1054730..1054816,1054948..>1055579)	Theileria orientalis strain Shintoku	20715666
TOT_030000491	mRNA	TOT_030000491	NC_025262.1	1055941	1061385	R	TOT_030000491	complement(join(<1055941..1057476,1057684..1057737,1058773..1059370,1059476..>1061385))	Theileria orientalis strain Shintoku	20715667
TOT_030000492	mRNA	TOT_030000492	NC_025262.1	1061819	1062442	D	TOT_030000492	<1061819..>1062442	Theileria orientalis strain Shintoku	20715668
TOT_030000493	mRNA	TOT_030000493	NC_025262.1	1063448	1063807	D	TOT_030000493	join(<1063448..1063564,1063598..>1063807)	Theileria orientalis strain Shintoku	20715669
TOT_030000494	mRNA	TOT_030000494	NC_025262.1	1064475	1065248	D	TOT_030000494	join(<1064475..1064632,1064674..1064758,1064792..1064878,1064910..1065181,1065215..>1065248)	Theileria orientalis strain Shintoku	20715670
TOT_030000923	mRNA	TOT_030000923	NC_025262.1	1065911	1067649	D	TOT_030000923	join(<1065911..1066022,1066055..1066204,1066277..1066381,1066412..1067323,1067459..>1067649)	Theileria orientalis strain Shintoku	20716060
TOT_030000496	mRNA	TOT_030000496	NC_025262.1	1067975	1068450	R	TOT_030000496	complement(join(<1067975..1068220,1068250..1068406,1068437..>1068450))	Theileria orientalis strain Shintoku	20715671
TOT_030000924	mRNA	TOT_030000924	NC_025262.1	1068683	1069076	R	TOT_030000924	complement(join(<1068683..1068760,1068794..1068955,1068990..>1069076))	Theileria orientalis strain Shintoku	20716061
TOT_030000925	mRNA	TOT_030000925	NC_025262.1	1069255	1069847	R	TOT_030000925	complement(join(<1069255..1069539,1069641..>1069847))	Theileria orientalis strain Shintoku	20716062
TOT_030000926	mRNA	TOT_030000926	NC_025262.1	1071020	1071389	R	TOT_030000926	complement(join(<1071020..1071118,1071150..1071197,1071276..>1071389))	Theileria orientalis strain Shintoku	20716063
TOT_030000500	mRNA	TOT_030000500	NC_025262.1	1072165	1077306	D	TOT_030000500	join(<1072165..1073111,1073166..1074476,1074531..1074835,1074881..1075135,1075265..1075566,1075681..1075845,1076050..>1077306)	Theileria orientalis strain Shintoku	20715672
TOT_030000501	mRNA	TOT_030000501	NC_025262.1	1079335	1079945	R	TOT_030000501	complement(join(<1079335..1079484,1079515..1079640,1079742..>1079945))	Theileria orientalis strain Shintoku	20715673
TOT_030000502	mRNA	TOT_030000502	NC_025262.1	1080108	1081006	D	TOT_030000502	join(<1080108..1080185,1080220..1080450,1080539..1080660,1080874..>1081006)	Theileria orientalis strain Shintoku	20715674
TOT_030000503	mRNA	TOT_030000503	NC_025262.1	1081063	1082843	R	TOT_030000503	complement(join(<1081063..1081210,1081478..1081606,1081677..1081760,1081919..1082715,1082835..>1082843))	Theileria orientalis strain Shintoku	20715675
TOT_030000504	mRNA	TOT_030000504	NC_025262.1	1083347	1085185	R	TOT_030000504	complement(join(<1083347..1083421,1083716..1084358,1084439..1084668,1084709..>1085185))	Theileria orientalis strain Shintoku	20715676
TOT_030000505	mRNA	TOT_030000505	NC_025262.1	1085486	1086953	R	TOT_030000505	complement(join(<1085486..1086134,1086216..1086445,1086477..>1086953))	Theileria orientalis strain Shintoku	20715677
TOT_030000506	mRNA	TOT_030000506	NC_025262.1	1087891	1089555	D	TOT_030000506	join(<1087891..1088987,1089096..>1089555)	Theileria orientalis strain Shintoku	20715678
TOT_030000507	mRNA	TOT_030000507	NC_025262.1	1089890	1092326	R	TOT_030000507	complement(join(<1089890..1090080,1090185..1090416,1090593..1090680,1090809..1091170,1091371..1091462,1091530..1091632,1091676..1092157,1092191..>1092326))	Theileria orientalis strain Shintoku	20715679
TOT_030000508	mRNA	TOT_030000508	NC_025262.1	1092864	1093589	D	TOT_030000508	<1092864..>1093589	Theileria orientalis strain Shintoku	20715680
TOT_030000509	mRNA	TOT_030000509	NC_025262.1	1093639	1096092	R	TOT_030000509	complement(join(<1093639..1093911,1093943..1094031,1094136..1094236,1094530..1094873,1094994..1095035,1095065..1095145,1095177..1095554,1095670..>1096092))	Theileria orientalis strain Shintoku	20715681
TOT_030000510	mRNA	TOT_030000510	NC_025262.1	1096199	1097196	R	TOT_030000510	complement(join(<1096199..1096450,1096482..1096770,1096868..>1097196))	Theileria orientalis strain Shintoku	20715682
TOT_030000511	mRNA	TOT_030000511	NC_025262.1	1097488	1098825	R	TOT_030000511	complement(<1097488..>1098825)	Theileria orientalis strain Shintoku	20715683
TOT_030000512	mRNA	TOT_030000512	NC_025262.1	1099286	1100986	R	TOT_030000512	complement(<1099286..>1100986)	Theileria orientalis strain Shintoku	20715684
TOT_030000513	mRNA	TOT_030000513	NC_025262.1	1101436	1102866	R	TOT_030000513	complement(<1101436..>1102866)	Theileria orientalis strain Shintoku	20715685
TOT_030000514	mRNA	TOT_030000514	NC_025262.1	1103712	1105671	R	TOT_030000514	complement(join(<1103712..1105583,1105669..>1105671))	Theileria orientalis strain Shintoku	20715686
TOT_030000515	mRNA	TOT_030000515	NC_025262.1	1106107	1110223	R	TOT_030000515	complement(join(<1106107..1107815,1108375..>1110223))	Theileria orientalis strain Shintoku	20715687
TOT_030000516	mRNA	TOT_030000516	NC_025262.1	1110421	1111003	R	TOT_030000516	complement(join(<1110421..1110521,1110886..>1111003))	Theileria orientalis strain Shintoku	20715688
TOT_030000517	mRNA	TOT_030000517	NC_025262.1	1111182	1112083	D	TOT_030000517	join(<1111182..1111344,1111449..1111525,1111595..1111688,1111754..1111901,1111963..>1112083)	Theileria orientalis strain Shintoku	20715689
TOT_030000518	mRNA	TOT_030000518	NC_025262.1	1115979	1116610	D	TOT_030000518	join(<1115979..1116500,1116569..>1116610)	Theileria orientalis strain Shintoku	20715690
TOT_030000519	mRNA	TOT_030000519	NC_025262.1	1116776	1117909	R	TOT_030000519	complement(join(<1116776..1117481,1117511..1117654,1117686..>1117909))	Theileria orientalis strain Shintoku	20715691
TOT_030000520	mRNA	TOT_030000520	NC_025262.1	1118017	1118700	D	TOT_030000520	join(<1118017..1118031,1118138..1118273,1118315..1118523,1118554..>1118700)	Theileria orientalis strain Shintoku	20715692
TOT_030000521	mRNA	TOT_030000521	NC_025262.1	1118712	1119759	D	TOT_030000521	join(<1118712..1119426,1119503..>1119759)	Theileria orientalis strain Shintoku	20715693
TOT_030000522	mRNA	TOT_030000522	NC_025262.1	1119974	1122442	R	TOT_030000522	complement(join(<1119974..1121227,1121288..>1122442))	Theileria orientalis strain Shintoku	20715694
TOT_030000523	mRNA	TOT_030000523	NC_025262.1	1122533	1123807	R	TOT_030000523	complement(join(<1122533..1123105,1123193..1123654,1123688..>1123807))	Theileria orientalis strain Shintoku	20715695
TOT_030000524	mRNA	TOT_030000524	NC_025262.1	1124204	1125315	R	TOT_030000524	complement(join(<1124204..1124589,1124622..>1125315))	Theileria orientalis strain Shintoku	20715696
TOT_030000927	mRNA	TOT_030000927	NC_025262.1	1125722	1126345	R	TOT_030000927	complement(<1125722..>1126345)	Theileria orientalis strain Shintoku	20716064
TOT_030000526	mRNA	TOT_030000526	NC_025262.1	1126644	1130141	R	TOT_030000526	complement(join(<1126644..1126951,1126983..1127164,1127195..1127420,1127520..1128061,1128162..1128248,1128285..1128394,1128438..>1130141))	Theileria orientalis strain Shintoku	20715697
TOT_030000527	mRNA	TOT_030000527	NC_025262.1	1130230	1131486	R	TOT_030000527	complement(join(<1130230..1130253,1130458..1130540,1130572..1130642,1130672..1130763,1130802..1130882,1130919..1130995,1131168..1131278,1131366..>1131486))	Theileria orientalis strain Shintoku	20715698
TOT_030000528	mRNA	TOT_030000528	NC_025262.1	1131703	1132305	D	TOT_030000528	<1131703..>1132305	Theileria orientalis strain Shintoku	20715699
TOT_030000529	mRNA	TOT_030000529	NC_025262.1	1132324	1135619	D	TOT_030000529	join(<1132324..1132727,1132759..1133091,1133124..1133245,1133332..1133462,1133608..1133687,1133738..1133966,1134001..1134083,1134135..1134237,1134287..1134450,1134488..1134623,1135040..1135273,1135311..>1135619)	Theileria orientalis strain Shintoku	20715700
TOT_030000530	mRNA	TOT_030000530	NC_025262.1	1135731	1136601	D	TOT_030000530	join(<1135731..1136090,1136121..1136181,1136219..1136382,1136437..>1136601)	Theileria orientalis strain Shintoku	20715701
TOT_030000531	mRNA	TOT_030000531	NC_025262.1	1136803	1140134	R	TOT_030000531	complement(join(<1136803..1137012,1137085..1137127,1137251..1137327,1137400..1137542,1137609..1138017,1138050..1138155,1138315..1138402,1138433..1138503,1138532..1138634,1138763..1138938,1139011..1139130,1139162..1139367,1139398..1139549,1139579..>1140134))	Theileria orientalis strain Shintoku	20715702
TOT_030000532	mRNA	TOT_030000532	NC_025262.1	1140332	1141791	D	TOT_030000532	join(<1140332..1140452,1140492..1140692,1140774..1140876,1140923..1141026,1141057..1141298,1141334..1141452,1141623..>1141791)	Theileria orientalis strain Shintoku	20715703
TOT_030000533	mRNA	TOT_030000533	NC_025262.1	1142146	1143623	R	TOT_030000533	complement(join(<1142146..1142580,1142690..1142839,1142964..>1143623))	Theileria orientalis strain Shintoku	20715704
TOT_030000534	mRNA	TOT_030000534	NC_025262.1	1143751	1144983	D	TOT_030000534	join(<1143751..1143932,1143964..1144505,1144655..>1144983)	Theileria orientalis strain Shintoku	20715705
TOT_030000535	mRNA	TOT_030000535	NC_025262.1	1145225	1146241	R	TOT_030000535	complement(<1145225..>1146241)	Theileria orientalis strain Shintoku	20715706
TOT_030000536	mRNA	TOT_030000536	NC_025262.1	1147210	1153359	R	TOT_030000536	complement(join(<1147210..1147896,1147954..1148111,1148143..1148317,1148700..1149019,1149063..1149135,1149351..1149458,1149505..1149578,1149610..1149670,1149753..1149876,1149915..1150039,1150290..1150581,1150616..1150705,1150785..1150888,1150918..1150999,1151032..1151212,1151229..1153232,1153272..>1153359))	Theileria orientalis strain Shintoku	20715707
TOT_030000537	mRNA	TOT_030000537	NC_025262.1	1153462	1154161	R	TOT_030000537	complement(join(<1153462..1153742,1153774..1153915,1153985..1154050,1154081..>1154161))	Theileria orientalis strain Shintoku	20715708
TOT_030000538	mRNA	TOT_030000538	NC_025262.1	1154315	1156202	R	TOT_030000538	complement(join(<1154315..1155383,1155413..1155582,1155615..>1156202))	Theileria orientalis strain Shintoku	20715709
TOT_030000539	mRNA	TOT_030000539	NC_025262.1	1156236	1157033	D	TOT_030000539	<1156236..>1157033	Theileria orientalis strain Shintoku	20715710
TOT_030000540	mRNA	TOT_030000540	NC_025262.1	1157245	1158283	D	TOT_030000540	join(<1157245..1157496,1157527..1157621,1157666..1157719,1157751..1157814,1157861..1157967,1157997..1158102,1158167..>1158283)	Theileria orientalis strain Shintoku	20715711
TOT_030000928	mRNA	TOT_030000928	NC_025262.1	1158333	1159205	R	TOT_030000928	complement(<1158333..>1159205)	Theileria orientalis strain Shintoku	20716065
TOT_030000542	mRNA	TOT_030000542	NC_025262.1	1160510	1162469	D	TOT_030000542	join(<1160510..1160689,1160739..1161005,1161047..1161120,1161185..1161305,1161367..1161495,1161549..1161998,1162066..1162251,1162389..>1162469)	Theileria orientalis strain Shintoku	20715712
TOT_030000543	mRNA	TOT_030000543	NC_025262.1	1162663	1165159	R	TOT_030000543	complement(join(<1162663..1164395,1164461..1164780,1164813..1164886,1164944..1165034,1165068..>1165159))	Theileria orientalis strain Shintoku	20715713
TOT_030000544	mRNA	TOT_030000544	NC_025262.1	1165718	1166851	R	TOT_030000544	complement(<1165718..>1166851)	Theileria orientalis strain Shintoku	20715714
TOT_030000545	mRNA	TOT_030000545	NC_025262.1	1167052	1168349	R	TOT_030000545	complement(join(<1167052..1167318,1167349..1167423,1167452..1167723,1167754..1167883,1167915..>1168349))	Theileria orientalis strain Shintoku	20715715
TOT_030000546	mRNA	TOT_030000546	NC_025262.1	1168721	1169483	D	TOT_030000546	join(<1168721..1168855,1168938..>1169483)	Theileria orientalis strain Shintoku	20715716
TOT_030000547	mRNA	TOT_030000547	NC_025262.1	1169733	1170332	D	TOT_030000547	<1169733..>1170332	Theileria orientalis strain Shintoku	20715717
TOT_030000548	mRNA	TOT_030000548	NC_025262.1	1170570	1170870	R	TOT_030000548	complement(join(<1170570..1170722,1170757..>1170870))	Theileria orientalis strain Shintoku	20715718
TOT_030000549	mRNA	TOT_030000549	NC_025262.1	1171357	1176523	D	TOT_030000549	join(<1171357..1171486,1171520..1171615,1171651..1172166,1172205..1173091,1173149..1174325,1174416..1175839,1175906..>1176523)	Theileria orientalis strain Shintoku	20715719
TOT_030000550	mRNA	TOT_030000550	NC_025262.1	1177263	1180557	R	TOT_030000550	complement(join(<1177263..1177557,1177639..1178978,1179196..>1180557))	Theileria orientalis strain Shintoku	20715720
TOT_030000551	mRNA	TOT_030000551	NC_025262.1	1180811	1182105	R	TOT_030000551	complement(join(<1180811..1181869,1181947..>1182105))	Theileria orientalis strain Shintoku	20715721
TOT_030000552	mRNA	TOT_030000552	NC_025262.1	1182368	1183370	D	TOT_030000552	join(<1182368..1182566,1182665..1182874,1182963..1183176,1183265..>1183370)	Theileria orientalis strain Shintoku	20715722
TOT_030000929	mRNA	TOT_030000929	NC_025262.1	1183486	1184295	D	TOT_030000929	<1183486..>1184295	Theileria orientalis strain Shintoku	20716066
TOT_030000554	mRNA	TOT_030000554	NC_025262.1	1184724	1193271	D	TOT_030000554	join(<1184724..1192470,1192736..>1193271)	Theileria orientalis strain Shintoku	20715723
TOT_030000555	mRNA	TOT_030000555	NC_025262.1	1193608	1194897	D	TOT_030000555	join(<1193608..1193851,1193965..1194363,1194394..1194452,1194484..1194646,1194815..>1194897)	Theileria orientalis strain Shintoku	20715724
TOT_030000556	mRNA	TOT_030000556	NC_025262.1	1195050	1196913	D	TOT_030000556	join(<1195050..1195406,1195445..1195730,1195762..1196156,1196230..>1196913)	Theileria orientalis strain Shintoku	20715725
TOT_030000557	mRNA	TOT_030000557	NC_025262.1	1197101	1198021	D	TOT_030000557	join(<1197101..1197356,1197393..>1198021)	Theileria orientalis strain Shintoku	20715726
TOT_030000558	mRNA	TOT_030000558	NC_025262.1	1198179	1200512	R	TOT_030000558	complement(join(<1198179..1198554,1198621..1199290,1199357..1200038,1200264..>1200512))	Theileria orientalis strain Shintoku	20715727
TOT_030000930	mRNA	TOT_030000930	NC_025262.1	1200613	1206835	R	TOT_030000930	complement(join(<1200613..1200743,1200780..1202252,1202391..1202895,1203109..1203926,1204189..1206081,1206115..>1206835))	Theileria orientalis strain Shintoku	20716067
TOT_030000560	mRNA	TOT_030000560	NC_025262.1	1207701	1208289	R	TOT_030000560	complement(join(<1207701..1207745,1207806..1207864,1207995..1208076,1208128..>1208289))	Theileria orientalis strain Shintoku	20715728
TOT_030000561	mRNA	TOT_030000561	NC_025262.1	1208583	1209999	R	TOT_030000561	complement(join(<1208583..1209250,1209311..1209424,1209528..>1209999))	Theileria orientalis strain Shintoku	20715729
TOT_030000562	mRNA	TOT_030000562	NC_025262.1	1210466	1211891	R	TOT_030000562	complement(join(<1210466..1211316,1211420..>1211891))	Theileria orientalis strain Shintoku	20715730
TOT_030000563	mRNA	TOT_030000563	NC_025262.1	1212266	1213582	R	TOT_030000563	complement(<1212266..>1213582)	Theileria orientalis strain Shintoku	20715731
TOT_030000564	mRNA	TOT_030000564	NC_025262.1	1214276	1215797	R	TOT_030000564	complement(join(<1214276..1215180,1215311..>1215797))	Theileria orientalis strain Shintoku	20715732
TOT_030000565	mRNA	TOT_030000565	NC_025262.1	1215945	1217375	R	TOT_030000565	complement(<1215945..>1217375)	Theileria orientalis strain Shintoku	20715733
TOT_030000566	mRNA	TOT_030000566	NC_025262.1	1217548	1217946	R	TOT_030000566	complement(join(<1217548..1217685,1217755..>1217946))	Theileria orientalis strain Shintoku	20715734
TOT_030000567	mRNA	TOT_030000567	NC_025262.1	1218262	1220284	R	TOT_030000567	complement(join(<1218262..1219112,1219237..1219703,1220211..>1220284))	Theileria orientalis strain Shintoku	20715735
TOT_030000568	mRNA	TOT_030000568	NC_025262.1	1220325	1222290	R	TOT_030000568	complement(join(<1220325..1220815,1220880..1221840,1221874..>1222290))	Theileria orientalis strain Shintoku	20715736
TOT_030000569	mRNA	TOT_030000569	NC_025262.1	1222444	1222794	D	TOT_030000569	join(<1222444..1222508,1222586..1222680,1222709..>1222794)	Theileria orientalis strain Shintoku	20715737
TOT_030000570	mRNA	TOT_030000570	NC_025262.1	1222930	1223632	D	TOT_030000570	join(<1222930..1223116,1223155..1223235,1223268..>1223632)	Theileria orientalis strain Shintoku	20715738
TOT_030000571	mRNA	TOT_030000571	NC_025262.1	1224238	1226146	D	TOT_030000571	join(<1224238..1224338,1224411..1224463,1224502..1224740,1224884..1225006,1225046..1225202,1225305..1225643,1225875..>1226146)	Theileria orientalis strain Shintoku	20715739
TOT_030000572	mRNA	TOT_030000572	NC_025262.1	1226367	1227496	R	TOT_030000572	complement(join(<1226367..1226570,1226675..1226878,1226910..1227089,1227123..1227292,1227325..>1227496))	Theileria orientalis strain Shintoku	20715740
TOT_030000573	mRNA	TOT_030000573	NC_025262.1	1227787	1229482	D	TOT_030000573	join(<1227787..1228234,1228473..1228621,1228652..1229053,1229204..>1229482)	Theileria orientalis strain Shintoku	20715741
TOT_030000574	mRNA	TOT_030000574	NC_025262.1	1229502	1230233	R	TOT_030000574	complement(join(<1229502..1229638,1229675..>1230233))	Theileria orientalis strain Shintoku	20715742
TOT_030000575	mRNA	TOT_030000575	NC_025262.1	1230317	1231245	D	TOT_030000575	join(<1230317..1231097,1231160..>1231245)	Theileria orientalis strain Shintoku	20715743
TOT_030000931	mRNA	TOT_030000931	NC_025262.1	1231756	1234340	R	TOT_030000931	complement(join(<1231756..1231941,1232117..1232199,1232489..1232765,1232830..1233811,1233842..1234195,1234228..>1234340))	Theileria orientalis strain Shintoku	20716068
TOT_030000577	mRNA	TOT_030000577	NC_025262.1	1234466	1235766	D	TOT_030000577	join(<1234466..1234499,1234598..1234704,1234781..1235164,1235195..1235283,1235343..1235575,1235609..>1235766)	Theileria orientalis strain Shintoku	20715744
TOT_030000578	mRNA	TOT_030000578	NC_025262.1	1235915	1240606	D	TOT_030000578	join(<1235915..1237466,1237749..1238758,1238969..1239521,1240197..>1240606)	Theileria orientalis strain Shintoku	20715745
TOT_030000579	mRNA	TOT_030000579	NC_025262.1	1240990	1241648	D	TOT_030000579	join(<1240990..1241309,1241358..1241449,1241479..>1241648)	Theileria orientalis strain Shintoku	20715746
TOT_030000580	mRNA	TOT_030000580	NC_025262.1	1241988	1245197	R	TOT_030000580	complement(join(<1241988..1242849,1243441..1244663,1244817..>1245197))	Theileria orientalis strain Shintoku	20715747
TOT_030000581	mRNA	TOT_030000581	NC_025262.1	1246109	1247312	D	TOT_030000581	join(<1246109..1246171,1246251..1246356,1246503..1246606,1246661..1246756,1246858..1247025,1247109..>1247312)	Theileria orientalis strain Shintoku	20715748
TOT_030000582	mRNA	TOT_030000582	NC_025262.1	1247492	1249073	D	TOT_030000582	join(<1247492..1247582,1247618..1248040,1248198..1248733,1248948..>1249073)	Theileria orientalis strain Shintoku	20715749
TOT_030000583	mRNA	TOT_030000583	NC_025262.1	1249265	1252900	R	TOT_030000583	complement(<1249265..>1252900)	Theileria orientalis strain Shintoku	20715750
TOT_030000584	mRNA	TOT_030000584	NC_025262.1	1253288	1254789	R	TOT_030000584	complement(join(<1253288..1253855,1253899..1253989,1254022..1254150,1254199..1254259,1254289..1254349,1254380..1254523,1254566..1254681,1254715..>1254789))	Theileria orientalis strain Shintoku	20715751
TOT_030000585	mRNA	TOT_030000585	NC_025262.1	1255254	1256372	D	TOT_030000585	join(<1255254..1255402,1255456..1255552,1255583..1255660,1255693..1255800,1255911..1256074,1256309..>1256372)	Theileria orientalis strain Shintoku	20715752
TOT_030000586	mRNA	TOT_030000586	NC_025262.1	1257146	1259854	R	TOT_030000586	complement(join(<1257146..1258564,1258634..1258730,1258806..>1259854))	Theileria orientalis strain Shintoku	20715753
TOT_030000587	mRNA	TOT_030000587	NC_025262.1	1260378	1262535	D	TOT_030000587	join(<1260378..1261499,1261716..1261803,1261835..1262122,1262255..1262396,1262448..>1262535)	Theileria orientalis strain Shintoku	20715754
TOT_030000588	mRNA	TOT_030000588	NC_025262.1	1262614	1264202	D	TOT_030000588	join(<1262614..1263633,1263864..>1264202)	Theileria orientalis strain Shintoku	20715755
TOT_030000589	mRNA	TOT_030000589	NC_025262.1	1264465	1266018	D	TOT_030000589	join(<1264465..1264699,1264823..1264962,1265158..1265379,1265457..1265607,1265675..1265762,1265842..1265893,1265920..>1266018)	Theileria orientalis strain Shintoku	20715756
TOT_030000590	mRNA	TOT_030000590	NC_025262.1	1266358	1267682	R	TOT_030000590	complement(join(<1266358..1266656,1266854..1266878,1266945..1267360,1267493..>1267682))	Theileria orientalis strain Shintoku	20715757
TOT_030000591	mRNA	TOT_030000591	NC_025262.1	1268675	1269916	D	TOT_030000591	<1268675..>1269916	Theileria orientalis strain Shintoku	20715758
TOT_030000592	mRNA	TOT_030000592	NC_025262.1	1270129	1271423	D	TOT_030000592	join(<1270129..1270174,1270224..1270310,1270336..1271056,1271216..>1271423)	Theileria orientalis strain Shintoku	20715759
TOT_030000593	mRNA	TOT_030000593	NC_025262.1	1271610	1273835	R	TOT_030000593	complement(join(<1271610..1272077,1272114..1272696,1272787..>1273835))	Theileria orientalis strain Shintoku	20715760
TOT_030000594	mRNA	TOT_030000594	NC_025262.1	1274180	1276323	D	TOT_030000594	join(<1274180..1274374,1274410..1274543,1274587..1274906,1274948..1275025,1275122..1275300,1275382..1275657,1275853..>1276323)	Theileria orientalis strain Shintoku	20715761
TOT_030000595	mRNA	TOT_030000595	NC_025262.1	1276532	1277899	R	TOT_030000595	complement(join(<1276532..1277664,1277733..1277771,1277863..>1277899))	Theileria orientalis strain Shintoku	20715762
TOT_030000932	mRNA	TOT_030000932	NC_025262.1	1278208	1279588	D	TOT_030000932	join(<1278208..1278322,1278411..>1279588)	Theileria orientalis strain Shintoku	20716069
TOT_030000933	mRNA	TOT_030000933	NC_025262.1	1280333	1282102	D	TOT_030000933	join(<1280333..1280403,1280494..1281157,1281407..>1282102)	Theileria orientalis strain Shintoku	20716070
TOT_030000934	mRNA	TOT_030000934	NC_025262.1	1282399	1284219	R	TOT_030000934	complement(<1282399..>1284219)	Theileria orientalis strain Shintoku	20716071
TOT_030000598	mRNA	TOT_030000598	NC_025262.1	1284453	1288928	D	TOT_030000598	join(<1284453..1284888,1284946..1285013,1285045..1285160,1285253..1286490,1286587..1287033,1287097..1287338,1287390..1287620,1287657..1288600,1288778..>1288928)	Theileria orientalis strain Shintoku	20715763
TOT_030000599	mRNA	TOT_030000599	NC_025262.1	1289018	1290640	R	TOT_030000599	complement(join(<1289018..1289118,1289316..1289469,1289556..1290004,1290115..>1290640))	Theileria orientalis strain Shintoku	20715764
TOT_030000935	mRNA	TOT_030000935	NC_025262.1	1291495	1292083	R	TOT_030000935	complement(join(<1291495..1291750,1291788..>1292083))	Theileria orientalis strain Shintoku	20716072
TOT_030000601	mRNA	TOT_030000601	NC_025262.1	1292184	1297067	R	TOT_030000601	complement(join(<1292184..1293395,1293543..1293763,1293830..1294291,1294394..1295046,1295131..1296287,1296444..>1297067))	Theileria orientalis strain Shintoku	20715765
TOT_030000602	mRNA	TOT_030000602	NC_025262.1	1297367	1299659	R	TOT_030000602	complement(join(<1297367..1298338,1298505..1299125,1299187..1299349,1299439..1299503,1299537..>1299659))	Theileria orientalis strain Shintoku	20715766
TOT_030000603	mRNA	TOT_030000603	NC_025262.1	1299884	1300475	D	TOT_030000603	join(<1299884..1300049,1300118..1300397,1300445..>1300475)	Theileria orientalis strain Shintoku	20715767
TOT_030000604	mRNA	TOT_030000604	NC_025262.1	1300538	1302058	R	TOT_030000604	complement(join(<1300538..1300792,1300912..1301057,1301162..1301279,1301339..1301589,1301623..1301927,1301982..>1302058))	Theileria orientalis strain Shintoku	20715768
TOT_030000605	mRNA	TOT_030000605	NC_025262.1	1302291	1302806	D	TOT_030000605	<1302291..>1302806	Theileria orientalis strain Shintoku	20715769
TOT_030000606	mRNA	TOT_030000606	NC_025262.1	1303244	1310119	D	TOT_030000606	join(<1303244..1303401,1303600..1305387,1305508..1306273,1306409..1308078,1308214..1308340,1308767..1309168,1309439..>1310119)	Theileria orientalis strain Shintoku	20715770
TOT_030000607	mRNA	TOT_030000607	NC_025262.1	1310480	1310932	D	TOT_030000607	<1310480..>1310932	Theileria orientalis strain Shintoku	20715771
TOT_030000608	mRNA	TOT_030000608	NC_025262.1	1311061	1314694	R	TOT_030000608	complement(join(<1311061..1311259,1311417..1311577,1311822..1312450,1312656..1312857,1312890..1313001,1313057..1313237,1313344..1313444,1313615..1313703,1313730..1313762,1313807..1313987,1314020..1314108,1314200..1314331,1314363..1314422,1314533..>1314694))	Theileria orientalis strain Shintoku	20715772
TOT_030000609	mRNA	TOT_030000609	NC_025262.1	1315662	1319140	D	TOT_030000609	join(<1315662..1315857,1316014..1317220,1317389..1317851,1317999..1318502,1318534..1318847,1319014..>1319140)	Theileria orientalis strain Shintoku	20715773
TOT_030000610	mRNA	TOT_030000610	NC_025262.1	1320252	1324049	D	TOT_030000610	join(<1320252..1320577,1320754..1320755,1321834..>1324049)	Theileria orientalis strain Shintoku	20715774
TOT_030000611	mRNA	TOT_030000611	NC_025262.1	1324614	1325453	D	TOT_030000611	join(<1324614..1325279,1325358..>1325453)	Theileria orientalis strain Shintoku	20715775
TOT_030000612	mRNA	TOT_030000612	NC_025262.1	1325775	1328006	D	TOT_030000612	join(<1325775..1325873,1325957..1326094,1326179..1326239,1326403..1326785,1326853..1326986,1327044..1327104,1327219..1327299,1327502..1327660,1327711..1327778,1327868..>1328006)	Theileria orientalis strain Shintoku	20715776
TOT_030000613	mRNA	TOT_030000613	NC_025262.1	1328348	1330088	D	TOT_030000613	join(<1328348..1328900,1328988..1329335,1329385..>1330088)	Theileria orientalis strain Shintoku	20715777
TOT_030000614	mRNA	TOT_030000614	NC_025262.1	1330258	1331997	R	TOT_030000614	complement(join(<1330258..1330703,1330791..1330801,1331009..1331682,1331869..>1331997))	Theileria orientalis strain Shintoku	20715778
TOT_030000615	mRNA	TOT_030000615	NC_025262.1	1332339	1334909	D	TOT_030000615	join(<1332339..1332402,1332560..1332733,1332833..1333192,1333203..1334651,1334797..>1334909)	Theileria orientalis strain Shintoku	20715779
TOT_030000616	mRNA	TOT_030000616	NC_025262.1	1334999	1335787	R	TOT_030000616	complement(join(<1334999..1335186,1335384..1335538,1335675..>1335787))	Theileria orientalis strain Shintoku	20715780
TOT_030000617	mRNA	TOT_030000617	NC_025262.1	1335963	1337785	D	TOT_030000617	join(<1335963..1336027,1336204..1336378,1336417..1336857,1336938..1337055,1337121..>1337785)	Theileria orientalis strain Shintoku	20715781
TOT_030000618	mRNA	TOT_030000618	NC_025262.1	1338416	1353579	R	TOT_030000618	complement(join(<1338416..1342885,1342907..1343196,1343215..1343562,1345533..1347494,1348310..1348319,1351095..1351127,1351669..1351703,1351729..1351753,1352018..1353480,1353519..>1353579))	Theileria orientalis strain Shintoku	20715782
TOT_030000619	mRNA	TOT_030000619	NC_025262.1	1354552	1355484	R	TOT_030000619	complement(join(<1354552..1354728,1354909..1354974,1355094..1355236,1355376..>1355484))	Theileria orientalis strain Shintoku	20715783
TOT_030000620	mRNA	TOT_030000620	NC_025262.1	1356177	1357430	R	TOT_030000620	complement(join(<1356177..1356331,1356666..1356785,1356941..>1357430))	Theileria orientalis strain Shintoku	20715784
TOT_030000621	mRNA	TOT_030000621	NC_025262.1	1357968	1358365	R	TOT_030000621	complement(join(<1357968..1358021,1358102..1358227,1358333..>1358365))	Theileria orientalis strain Shintoku	20715785
TOT_030000622	mRNA	TOT_030000622	NC_025262.1	1358679	1359566	R	TOT_030000622	complement(join(<1358679..1358777,1358882..1359159,1359251..1359382,1359521..>1359566))	Theileria orientalis strain Shintoku	20715786
TOT_030000623	mRNA	TOT_030000623	NC_025262.1	1359933	1362074	D	TOT_030000623	join(<1359933..1360071,1360138..1360362,1360486..1361046,1361122..1361289,1361344..1361411,1361570..1361685,1361765..>1362074)	Theileria orientalis strain Shintoku	20715787
TOT_030000624	mRNA	TOT_030000624	NC_025262.1	1362286	1364055	R	TOT_030000624	complement(<1362286..>1364055)	Theileria orientalis strain Shintoku	20715788
TOT_030000625	mRNA	TOT_030000625	NC_025262.1	1364459	1364847	D	TOT_030000625	join(<1364459..1364575,1364770..>1364847)	Theileria orientalis strain Shintoku	20715789
TOT_030000626	mRNA	TOT_030000626	NC_025262.1	1365004	1366578	R	TOT_030000626	complement(<1365004..>1366578)	Theileria orientalis strain Shintoku	20715790
TOT_030000627	mRNA	TOT_030000627	NC_025262.1	1366982	1367370	D	TOT_030000627	join(<1366982..1367098,1367293..>1367370)	Theileria orientalis strain Shintoku	20715791
TOT_030000628	mRNA	TOT_030000628	NC_025262.1	1367527	1369389	R	TOT_030000628	complement(<1367527..>1369389)	Theileria orientalis strain Shintoku	20715792
TOT_030000629	mRNA	TOT_030000629	NC_025262.1	1369793	1369918	D	TOT_030000629	<1369793..>1369918	Theileria orientalis strain Shintoku	20715793
TOT_030000630	mRNA	TOT_030000630	NC_025262.1	1373417	1376702	D	TOT_030000630	join(<1373417..1373498,1373703..1373841,1374033..1374194,1374287..1374526,1374890..1374976,1375078..1375222,1375310..1375417,1375729..1375857,1376274..>1376702)	Theileria orientalis strain Shintoku	20715794
TOT_030000631	mRNA	TOT_030000631	NC_025262.1	1377586	1380558	R	TOT_030000631	complement(<1377586..>1380558)	Theileria orientalis strain Shintoku	20715795
TOT_030000632	mRNA	TOT_030000632	NC_025262.1	1380990	1382450	R	TOT_030000632	complement(join(<1380990..1381318,1381606..1381672,1381947..>1382450))	Theileria orientalis strain Shintoku	20715796
TOT_030000633	mRNA	TOT_030000633	NC_025262.1	1383023	1385119	R	TOT_030000633	complement(join(<1383023..1383388,1383506..1383702,1383818..1383880,1383971..1384175,1384262..1384371,1384488..1384785,1384823..>1385119))	Theileria orientalis strain Shintoku	20715797
TOT_030000634	mRNA	TOT_030000634	NC_025262.1	1385543	1387468	R	TOT_030000634	complement(join(<1385543..1385721,1385832..1386350,1386553..1386903,1386974..1387261,1387303..>1387468))	Theileria orientalis strain Shintoku	20715798
TOT_030000635	mRNA	TOT_030000635	NC_025262.1	1388347	1389548	D	TOT_030000635	join(<1388347..1388362,1388456..1388893,1389031..1389212,1389351..>1389548)	Theileria orientalis strain Shintoku	20715799
TOT_030000636	mRNA	TOT_030000636	NC_025262.1	1389966	1391300	D	TOT_030000636	<1389966..>1391300	Theileria orientalis strain Shintoku	20715800
TOT_030000637	mRNA	TOT_030000637	NC_025262.1	1391557	1395921	R	TOT_030000637	complement(join(<1391557..1391691,1391788..1392092,1392279..1393143,1393223..1393605,1393637..1393897,1394187..1395062,1395259..1395465,1395528..>1395921))	Theileria orientalis strain Shintoku	20715801
TOT_030000936	mRNA	TOT_030000936	NC_025262.1	1396346	1396785	R	TOT_030000936	complement(join(<1396346..1396483,1396609..>1396785))	Theileria orientalis strain Shintoku	20716073
TOT_030000639	mRNA	TOT_030000639	NC_025262.1	1397009	1399829	D	TOT_030000639	join(<1397009..1397138,1397393..1397572,1397694..1397835,1397964..1398300,1398392..1398728,1398759..1398908,1398970..>1399829)	Theileria orientalis strain Shintoku	20715802
TOT_030000640	mRNA	TOT_030000640	NC_025262.1	1400186	1401429	R	TOT_030000640	complement(join(<1400186..1400464,1400476..1400609,1400727..1401064,1401095..>1401429))	Theileria orientalis strain Shintoku	20715803
TOT_030000641	mRNA	TOT_030000641	NC_025262.1	1401636	1402715	D	TOT_030000641	<1401636..>1402715	Theileria orientalis strain Shintoku	20715804
TOT_030000642	mRNA	TOT_030000642	NC_025262.1	1402798	1405776	D	TOT_030000642	join(<1402798..1405285,1405337..>1405776)	Theileria orientalis strain Shintoku	20715805
TOT_030000643	mRNA	TOT_030000643	NC_025262.1	1406253	1406840	D	TOT_030000643	<1406253..>1406840	Theileria orientalis strain Shintoku	20715806
TOT_030000644	mRNA	TOT_030000644	NC_025262.1	1408201	1412808	D	TOT_030000644	join(<1408201..1408688,1408791..1409210,1409244..>1412808)	Theileria orientalis strain Shintoku	20715807
TOT_030000645	mRNA	TOT_030000645	NC_025262.1	1413250	1414650	R	TOT_030000645	complement(<1413250..>1414650)	Theileria orientalis strain Shintoku	20715808
TOT_030000646	mRNA	TOT_030000646	NC_025262.1	1415845	1418719	R	TOT_030000646	complement(join(<1415845..1416098,1416267..1416386,1416613..1416971,1417217..1417431,1417465..1417664,1417825..>1418719))	Theileria orientalis strain Shintoku	20715809
TOT_030000647	mRNA	TOT_030000647	NC_025262.1	1419169	1421448	D	TOT_030000647	join(<1419169..1419523,1419582..1419687,1419735..1419908,1420012..1420093,1420128..1420202,1420422..1420675,1420710..1420853,1421067..>1421448)	Theileria orientalis strain Shintoku	20715810
TOT_030000648	mRNA	TOT_030000648	NC_025262.1	1421586	1423400	R	TOT_030000648	complement(join(<1421586..1421921,1422042..1422212,1422362..1422646,1422722..1422929,1422960..1423096,1423161..>1423400))	Theileria orientalis strain Shintoku	20715811
TOT_030000649	mRNA	TOT_030000649	NC_025262.1	1423608	1427161	D	TOT_030000649	join(<1423608..1423974,1424033..1424135,1424188..1424394,1424460..1424547,1424657..1424881,1425194..1426157,1426269..1426558,1426937..>1427161)	Theileria orientalis strain Shintoku	20715812
TOT_030000650	mRNA	TOT_030000650	NC_025262.1	1427343	1434121	D	TOT_030000650	join(<1427343..1427438,1427525..1427657,1427738..1428162,1428275..1428398,1428484..1428711,1428745..1429037,1429270..1429485,1429537..1429740,1429888..1430091,1430144..1430353,1430466..1430536,1430705..1430805,1431115..1431594,1431627..1431895,1432088..1432171,1432258..1432379,1432452..1433131,1433358..1433527,1433645..>1434121)	Theileria orientalis strain Shintoku	20715813
TOT_030000937	mRNA	TOT_030000937	NC_025262.1	1434213	1436169	D	TOT_030000937	join(<1434213..1434537,1434698..1435261,1435340..1435846,1435961..>1436169)	Theileria orientalis strain Shintoku	20716074
TOT_030000652	mRNA	TOT_030000652	NC_025262.1	1436401	1439357	D	TOT_030000652	join(<1436401..1438677,1438797..1438949,1439220..>1439357)	Theileria orientalis strain Shintoku	20715814
TOT_030000653	mRNA	TOT_030000653	NC_025262.1	1439427	1441702	R	TOT_030000653	complement(join(<1439427..1439817,1440079..1441019,1441120..1441167,1441204..1441298,1441331..1441583,1441646..>1441702))	Theileria orientalis strain Shintoku	20715815
TOT_030000654	mRNA	TOT_030000654	NC_025262.1	1442555	1444666	D	TOT_030000654	<1442555..>1444666	Theileria orientalis strain Shintoku	20715816
TOT_030000655	mRNA	TOT_030000655	NC_025262.1	1444805	1444950	R	TOT_030000655	complement(join(<1444805..1444837,1444867..>1444950))	Theileria orientalis strain Shintoku	20715817
TOT_030000656	mRNA	TOT_030000656	NC_025262.1	1445037	1446939	D	TOT_030000656	join(<1445037..1445069,1445107..>1446939)	Theileria orientalis strain Shintoku	20715818
TOT_030000657	mRNA	TOT_030000657	NC_025262.1	1447198	1449501	D	TOT_030000657	<1447198..>1449501	Theileria orientalis strain Shintoku	20715819
TOT_030000658	mRNA	TOT_030000658	NC_025262.1	1449988	1452999	R	TOT_030000658	complement(join(<1449988..1452072,1452146..1452194,1452257..>1452999))	Theileria orientalis strain Shintoku	20715820
TOT_030000659	mRNA	TOT_030000659	NC_025262.1	1453267	1456713	D	TOT_030000659	join(<1453267..1454235,1454401..1455486,1455530..1455868,1456084..1456146,1456198..1456450,1456586..>1456713)	Theileria orientalis strain Shintoku	20715821
TOT_030000660	mRNA	TOT_030000660	NC_025262.1	1456838	1457554	R	TOT_030000660	complement(<1456838..>1457554)	Theileria orientalis strain Shintoku	20715822
TOT_030000661	mRNA	TOT_030000661	NC_025262.1	1457689	1458521	R	TOT_030000661	complement(join(<1457689..1457763,1457810..1457874,1457950..1457989,1458022..1458075,1458141..1458172,1458298..1458365,1458409..>1458521))	Theileria orientalis strain Shintoku	20715823
TOT_030000662	mRNA	TOT_030000662	NC_025262.1	1458701	1459072	R	TOT_030000662	complement(<1458701..>1459072)	Theileria orientalis strain Shintoku	20715824
TOT_030000663	mRNA	TOT_030000663	NC_025262.1	1459570	1460742	D	TOT_030000663	<1459570..>1460742	Theileria orientalis strain Shintoku	20715825
TOT_030000664	mRNA	TOT_030000664	NC_025262.1	1460979	1463444	D	TOT_030000664	join(<1460979..1461171,1461238..1461321,1461359..1461488,1461795..1461968,1462064..1462199,1462238..1462291,1462421..1462555,1462598..1462699,1462733..1462925,1463245..>1463444)	Theileria orientalis strain Shintoku	20715826
TOT_030000665	mRNA	TOT_030000665	NC_025262.1	1463838	1468976	D	TOT_030000665	join(<1463838..1467415,1467533..1467551,1467636..>1468976)	Theileria orientalis strain Shintoku	20715827
TOT_030000938	mRNA	TOT_030000938	NC_025262.1	1469876	1471662	D	TOT_030000938	join(<1469876..1470410,1470441..1470727,1471069..1471339,1471414..1471482,1471514..>1471662)	Theileria orientalis strain Shintoku	20716075
TOT_030000667	mRNA	TOT_030000667	NC_025262.1	1472349	1475101	D	TOT_030000667	join(<1472349..1472396,1472537..1472684,1472726..1472916,1472972..1473121,1473177..1473595,1473695..1473870,1474030..1474182,1474320..1474516,1474657..1474800,1474898..>1475101)	Theileria orientalis strain Shintoku	20715828
TOT_030000939	mRNA	TOT_030000939	NC_025262.1	1475380	1476940	D	TOT_030000939	join(<1475380..1476407,1476481..>1476940)	Theileria orientalis strain Shintoku	20716076
TOT_030000940	mRNA	TOT_030000940	NC_025262.1	1477608	1480097	D	TOT_030000940	join(<1477608..1478987,1479066..1479405,1479547..1479896,1479933..>1480097)	Theileria orientalis strain Shintoku	20716077
TOT_030000670	mRNA	TOT_030000670	NC_025262.1	1480608	1481725	D	TOT_030000670	join(<1480608..1480790,1480898..1481009,1481097..>1481725)	Theileria orientalis strain Shintoku	20715829
TOT_030000671	mRNA	TOT_030000671	NC_025262.1	1482011	1482169	D	TOT_030000671	<1482011..>1482169	Theileria orientalis strain Shintoku	20715830
TOT_030000672	mRNA	TOT_030000672	NC_025262.1	1482453	1487765	D	TOT_030000672	join(<1482453..1483110,1483162..1483379,1483485..1483533,1483666..1484512,1484597..1485090,1485256..1485447,1485718..1485960,1486197..1486322,1486421..1486706,1486806..1487064,1487275..1487434,1487512..>1487765)	Theileria orientalis strain Shintoku	20715831
TOT_030000673	mRNA	TOT_030000673	NC_025262.1	1488103	1489105	D	TOT_030000673	join(<1488103..1488213,1488308..1488551,1488592..1488865,1488949..1489003,1489037..>1489105)	Theileria orientalis strain Shintoku	20715832
TOT_030000674	mRNA	TOT_030000674	NC_025262.1	1489514	1490264	R	TOT_030000674	complement(join(<1489514..1490004,1490255..>1490264))	Theileria orientalis strain Shintoku	20715833
TOT_030000675	mRNA	TOT_030000675	NC_025262.1	1490635	1491790	R	TOT_030000675	complement(join(<1490635..1490885,1491052..>1491790))	Theileria orientalis strain Shintoku	20715834
TOT_030000676	mRNA	TOT_030000676	NC_025262.1	1492368	1493834	D	TOT_030000676	join(<1492368..1492549,1492644..1492766,1492847..1492966,1493077..1493220,1493334..1493467,1493618..1493699,1493732..>1493834)	Theileria orientalis strain Shintoku	20715835
TOT_030000677	mRNA	TOT_030000677	NC_025262.1	1494008	1498185	R	TOT_030000677	complement(join(<1494008..1494124,1494198..1494390,1494664..1494968,1495001..1495138,1495280..1496418,1496577..1496830,1496973..1497061,1497097..1497167,1497198..1497350,1497409..1497622,1497718..1497868,1498004..>1498185))	Theileria orientalis strain Shintoku	20715836
TOT_030000678	mRNA	TOT_030000678	NC_025262.1	1498656	1501642	D	TOT_030000678	join(<1498656..1498947,1498978..1499119,1499151..1499217,1499260..1499512,1499545..1499711,1499887..1500241,1500305..1500392,1500448..1500550,1500597..1500686,1500892..1500993,1501067..1501322,1501437..>1501642)	Theileria orientalis strain Shintoku	20715837
TOT_030000679	mRNA	TOT_030000679	NC_025262.1	1502060	1510587	R	TOT_030000679	complement(join(<1502060..1502726,1502904..1503824,1504014..1505140,1505375..1505705,1505763..1506195,1506241..1506554,1506606..1507286,1507449..1507499,1507593..1508825,1508967..1509072,1509169..1509503,1509555..1509990,1510089..>1510587))	Theileria orientalis strain Shintoku	20715838
TOT_030000941	mRNA	TOT_030000941	NC_025262.1	1510779	1511498	R	TOT_030000941	complement(<1510779..>1511498)	Theileria orientalis strain Shintoku	20716078
TOT_030000680	mRNA	TOT_030000680	NC_025262.1	1511801	1521201	R	TOT_030000680	complement(join(<1511801..1512426,1512508..1512670,1512782..1514381,1514445..1514608,1514786..1514977,1515023..1515816,1516108..1518033,1518240..1518875,1519063..1520154,1520225..1520279,1520521..1520738,1520771..1520833,1520991..>1521201))	Theileria orientalis strain Shintoku	20715839
TOT_030000681	mRNA	TOT_030000681	NC_025262.1	1521338	1529834	R	TOT_030000681	complement(join(<1521338..1521507,1521671..1521800,1521833..1522000,1522117..1522171,1522252..1523083,1523944..1524259,1524346..1524829,1524951..1525054,1525219..1525544,1525702..1526429,1526850..1527117,1527318..1528997,1529231..>1529834))	Theileria orientalis strain Shintoku	20715840
TOT_030000682	mRNA	TOT_030000682	NC_025262.1	1530925	1533182	D	TOT_030000682	join(<1530925..1531764,1531945..1532068,1532120..1532559,1532694..>1533182)	Theileria orientalis strain Shintoku	20715841
TOT_030000683	mRNA	TOT_030000683	NC_025262.1	1533239	1533298	R	TOT_030000683	complement(<1533239..>1533298)	Theileria orientalis strain Shintoku	20715842
TOT_030000684	mRNA	TOT_030000684	NC_025262.1	1533669	1535327	R	TOT_030000684	complement(join(<1533669..1534498,1534613..>1535327))	Theileria orientalis strain Shintoku	20715843
TOT_030000685	mRNA	TOT_030000685	NC_025262.1	1536042	1536437	R	TOT_030000685	complement(<1536042..>1536437)	Theileria orientalis strain Shintoku	20715844
TOT_030000686	mRNA	TOT_030000686	NC_025262.1	1536943	1537479	R	TOT_030000686	complement(<1536943..>1537479)	Theileria orientalis strain Shintoku	20715845
TOT_030000687	mRNA	TOT_030000687	NC_025262.1	1537995	1539741	D	TOT_030000687	join(<1537995..1538109,1538244..1538779,1538994..1539353,1539408..1539532,1539597..>1539741)	Theileria orientalis strain Shintoku	20715846
TOT_030000688	mRNA	TOT_030000688	NC_025262.1	1540039	1541477	R	TOT_030000688	complement(join(<1540039..1540095,1540275..1540579,1540670..>1541477))	Theileria orientalis strain Shintoku	20715847
TOT_030000689	mRNA	TOT_030000689	NC_025262.1	1541817	1542107	D	TOT_030000689	<1541817..>1542107	Theileria orientalis strain Shintoku	20715848
TOT_030000690	mRNA	TOT_030000690	NC_025262.1	1542407	1544044	D	TOT_030000690	join(<1542407..1542746,1542915..>1544044)	Theileria orientalis strain Shintoku	20715849
TOT_030000691	mRNA	TOT_030000691	NC_025262.1	1544338	1545510	D	TOT_030000691	<1544338..>1545510	Theileria orientalis strain Shintoku	20715850
TOT_030000692	mRNA	TOT_030000692	NC_025262.1	1545761	1547506	D	TOT_030000692	join(<1545761..1546455,1546632..1546805,1546902..1547064,1547105..1547305,1547387..>1547506)	Theileria orientalis strain Shintoku	20715851
TOT_030000693	mRNA	TOT_030000693	NC_025262.1	1547718	1550327	R	TOT_030000693	complement(join(<1547718..1547792,1547871..1548016,1548108..1548189,1548389..1548458,1548524..1548647,1548718..1549047,1549290..1549350,1549371..1549452,1549487..1549585,1549617..1549691,1549724..1549866,1549899..>1550327))	Theileria orientalis strain Shintoku	20715852
TOT_030000694	mRNA	TOT_030000694	NC_025262.1	1550623	1551491	D	TOT_030000694	join(<1550623..1550683,1550729..1550783,1550818..1550930,1550963..1551057,1551087..1551353,1551408..>1551491)	Theileria orientalis strain Shintoku	20715853
TOT_030000695	mRNA	TOT_030000695	NC_025262.1	1551639	1552181	R	TOT_030000695	complement(join(<1551639..1551824,1551855..>1552181))	Theileria orientalis strain Shintoku	20715854
TOT_030000696	mRNA	TOT_030000696	NC_025262.1	1552613	1556281	R	TOT_030000696	complement(join(<1552613..1553239,1553948..1556093,1556217..>1556281))	Theileria orientalis strain Shintoku	20715855
TOT_030000697	mRNA	TOT_030000697	NC_025262.1	1556650	1557060	R	TOT_030000697	complement(<1556650..>1557060)	Theileria orientalis strain Shintoku	20715856
TOT_030000698	mRNA	TOT_030000698	NC_025262.1	1557172	1557509	D	TOT_030000698	join(<1557172..1557337,1557445..>1557509)	Theileria orientalis strain Shintoku	20715857
TOT_030000699	mRNA	TOT_030000699	NC_025262.1	1557748	1558332	R	TOT_030000699	complement(<1557748..>1558332)	Theileria orientalis strain Shintoku	20715858
TOT_030000700	mRNA	TOT_030000700	NC_025262.1	1558782	1559404	R	TOT_030000700	complement(join(<1558782..1558865,1558964..1559086,1559121..1559300,1559378..>1559404))	Theileria orientalis strain Shintoku	20715859
TOT_030000701	mRNA	TOT_030000701	NC_025262.1	1559840	1561834	R	TOT_030000701	complement(<1559840..>1561834)	Theileria orientalis strain Shintoku	20715860
TOT_030000702	mRNA	TOT_030000702	NC_025262.1	1562318	1566355	R	TOT_030000702	complement(join(<1562318..1563147,1563313..>1566355))	Theileria orientalis strain Shintoku	20715861
TOT_030000942	mRNA	TOT_030000942	NC_025262.1	1566663	1568138	R	TOT_030000942	complement(<1566663..>1568138)	Theileria orientalis strain Shintoku	20716079
TOT_030000943	mRNA	TOT_030000943	NC_025262.1	1568498	1571588	R	TOT_030000943	complement(join(<1568498..1568588,1568620..1568711,1568814..1569876,1570001..1570068,1570101..1570367,1570398..>1571588))	Theileria orientalis strain Shintoku	20716080
TOT_030000705	mRNA	TOT_030000705	NC_025262.1	1572538	1572892	R	TOT_030000705	complement(join(<1572538..1572642,1572676..1572748,1572780..>1572892))	Theileria orientalis strain Shintoku	20715862
TOT_030000706	mRNA	TOT_030000706	NC_025262.1	1573193	1579284	R	TOT_030000706	complement(join(<1573193..1573929,1574155..1574713,1574972..1575780,1575835..1576148,1576209..1577511,1577683..1578771,1578864..>1579284))	Theileria orientalis strain Shintoku	20715863
TOT_030000707	mRNA	TOT_030000707	NC_025262.1	1579441	1581748	R	TOT_030000707	complement(join(<1579441..1581524,1581598..>1581748))	Theileria orientalis strain Shintoku	20715864
TOT_030000708	mRNA	TOT_030000708	NC_025262.1	1581869	1583416	D	TOT_030000708	join(<1581869..1582039,1582071..1582178,1582190..1582371,1582461..1582713,1582814..1583038,1583138..1583234,1583319..>1583416)	Theileria orientalis strain Shintoku	20715865
TOT_030000709	mRNA	TOT_030000709	NC_025262.1	1583841	1585694	R	TOT_030000709	complement(join(<1583841..1583954,1584057..1584193,1584286..1584411,1584503..1584557,1584632..1584705,1584836..1584935,1584985..1585005,1585500..>1585694))	Theileria orientalis strain Shintoku	20715866
TOT_030000710	mRNA	TOT_030000710	NC_025262.1	1585855	1587777	R	TOT_030000710	complement(<1585855..>1587777)	Theileria orientalis strain Shintoku	20715867
TOT_030000711	mRNA	TOT_030000711	NC_025262.1	1587886	1590493	R	TOT_030000711	complement(join(<1587886..1588026,1588188..1588273,1588414..1588777,1588962..1589005,1589036..1589453,1589665..1589738,1589832..1590057,1590167..1590291,1590382..>1590493))	Theileria orientalis strain Shintoku	20715868
TOT_030000712	mRNA	TOT_030000712	NC_025262.1	1591084	1594216	R	TOT_030000712	complement(join(<1591084..1593517,1593555..1593891,1593967..>1594216))	Theileria orientalis strain Shintoku	20715869
TOT_030000713	mRNA	TOT_030000713	NC_025262.1	1594538	1595089	R	TOT_030000713	complement(<1594538..>1595089)	Theileria orientalis strain Shintoku	20715870
TOT_030000714	mRNA	TOT_030000714	NC_025262.1	1595302	1596653	R	TOT_030000714	complement(join(<1595302..1595399,1595667..1595780,1595967..1596242,1596641..>1596653))	Theileria orientalis strain Shintoku	20715871
TOT_030000944	mRNA	TOT_030000944	NC_025262.1	1596950	1597634	R	TOT_030000944	complement(join(<1596950..1597090,1597148..1597194,1597263..1597439,1597556..>1597634))	Theileria orientalis strain Shintoku	20716081
TOT_030000716	mRNA	TOT_030000716	NC_025262.1	1597758	1597982	D	TOT_030000716	<1597758..>1597982	Theileria orientalis strain Shintoku	20715872
TOT_030000717	mRNA	TOT_030000717	NC_025262.1	1598088	1600586	R	TOT_030000717	complement(join(<1598088..1598297,1598349..>1600586))	Theileria orientalis strain Shintoku	20715873
TOT_030000718	mRNA	TOT_030000718	NC_025262.1	1601189	1606024	R	TOT_030000718	complement(join(<1601189..1601428,1601687..1605923,1606008..>1606024))	Theileria orientalis strain Shintoku	20715874
TOT_030000719	mRNA	TOT_030000719	NC_025262.1	1606574	1606870	R	TOT_030000719	complement(join(<1606574..1606825,1606850..>1606870))	Theileria orientalis strain Shintoku	20715875
TOT_030000720	mRNA	TOT_030000720	NC_025262.1	1607033	1607683	R	TOT_030000720	complement(join(<1607033..1607247,1607332..>1607683))	Theileria orientalis strain Shintoku	20715876
TOT_030000721	mRNA	TOT_030000721	NC_025262.1	1607949	1608898	D	TOT_030000721	join(<1607949..1608161,1608233..1608470,1608622..1608742,1608838..>1608898)	Theileria orientalis strain Shintoku	20715877
TOT_030000722	mRNA	TOT_030000722	NC_025262.1	1609138	1612443	D	TOT_030000722	join(<1609138..1612163,1612272..>1612443)	Theileria orientalis strain Shintoku	20715878
TOT_030000723	mRNA	TOT_030000723	NC_025262.1	1612740	1613011	R	TOT_030000723	complement(join(<1612740..1612829,1612934..>1613011))	Theileria orientalis strain Shintoku	20715879
TOT_030000724	mRNA	TOT_030000724	NC_025262.1	1613127	1615367	R	TOT_030000724	complement(<1613127..>1615367)	Theileria orientalis strain Shintoku	20715880
TOT_030000725	mRNA	TOT_030000725	NC_025262.1	1616018	1616125	D	TOT_030000725	<1616018..>1616125	Theileria orientalis strain Shintoku	20715881
TOT_030000727	mRNA	TOT_030000727	NC_025262.1	1616412	1618587	R	TOT_030000727	complement(join(<1616412..1618369,1618560..>1618587))	Theileria orientalis strain Shintoku	20715882
TOT_030000728	mRNA	TOT_030000728	NC_025262.1	1619302	1621666	R	TOT_030000728	complement(join(<1619302..1619374,1619409..>1621666))	Theileria orientalis strain Shintoku	20715883
TOT_030000729	mRNA	TOT_030000729	NC_025262.1	1621911	1624347	R	TOT_030000729	complement(join(<1621911..1622013,1622390..>1624347))	Theileria orientalis strain Shintoku	20715884
TOT_030000730	mRNA	TOT_030000730	NC_025262.1	1625015	1626508	R	TOT_030000730	complement(<1625015..>1626508)	Theileria orientalis strain Shintoku	20715885
TOT_030000731	mRNA	TOT_030000731	NC_025262.1	1628101	1629711	R	TOT_030000731	complement(<1628101..>1629711)	Theileria orientalis strain Shintoku	20715886
TOT_030000732	mRNA	TOT_030000732	NC_025262.1	1629862	1632981	R	TOT_030000732	complement(<1629862..>1632981)	Theileria orientalis strain Shintoku	20715887
TOT_030000733	mRNA	TOT_030000733	NC_025262.1	1634107	1637187	D	TOT_030000733	join(<1634107..1634293,1634384..1634721,1634836..1634973,1635067..1635197,1635357..1635423,1635600..1635746,1635845..1635926,1636003..1636187,1636277..1636357,1636458..1636554,1636919..>1637187)	Theileria orientalis strain Shintoku	20715888
TOT_030000734	mRNA	TOT_030000734	NC_025262.1	1637770	1640716	D	TOT_030000734	join(<1637770..1638169,1638351..1639338,1639564..1639801,1639991..1640247,1640320..1640507,1640619..>1640716)	Theileria orientalis strain Shintoku	20715889
TOT_030000735	mRNA	TOT_030000735	NC_025262.1	1640856	1641366	D	TOT_030000735	join(<1640856..1640990,1641133..>1641366)	Theileria orientalis strain Shintoku	20715890
TOT_030000736	mRNA	TOT_030000736	NC_025262.1	1641780	1643366	D	TOT_030000736	<1641780..>1643366	Theileria orientalis strain Shintoku	20715891
TOT_030000737	mRNA	TOT_030000737	NC_025262.1	1644225	1647404	R	TOT_030000737	complement(join(<1644225..1644622,1645578..1645665,1645809..1646249,1646289..1646498,1646639..1646756,1646893..1647131,1647240..>1647404))	Theileria orientalis strain Shintoku	20715892
TOT_030000738	mRNA	TOT_030000738	NC_025262.1	1648116	1648640	D	TOT_030000738	join(<1648116..1648150,1648297..1648411,1648542..>1648640)	Theileria orientalis strain Shintoku	20715893
TOT_030000945	mRNA	TOT_030000945	NC_025262.1	1648831	1649939	R	TOT_030000945	complement(join(<1648831..1648968,1649151..1649231,1649313..1649475,1649621..1649731,1649875..>1649939))	Theileria orientalis strain Shintoku	20716082
TOT_030000740	mRNA	TOT_030000740	NC_025262.1	1650468	1654039	R	TOT_030000740	complement(join(<1650468..1652837,1653096..1653649,1653844..>1654039))	Theileria orientalis strain Shintoku	20715894
TOT_030000741	mRNA	TOT_030000741	NC_025262.1	1654484	1660327	D	TOT_030000741	join(<1654484..1655320,1655436..1655468,1655566..1655787,1655870..1657391,1657545..1657901,1658115..1658221,1658360..1658993,1659168..>1660327)	Theileria orientalis strain Shintoku	20715895
TOT_030000742	mRNA	TOT_030000742	NC_025262.1	1660591	1661012	R	TOT_030000742	complement(join(<1660591..1660757,1660790..>1661012))	Theileria orientalis strain Shintoku	20715896
TOT_030000743	mRNA	TOT_030000743	NC_025262.1	1661101	1661274	R	TOT_030000743	complement(<1661101..>1661274)	Theileria orientalis strain Shintoku	20715897
TOT_030000744	mRNA	TOT_030000744	NC_025262.1	1661661	1664198	R	TOT_030000744	complement(join(<1661661..1663247,1663335..>1664198))	Theileria orientalis strain Shintoku	20715898
TOT_030000946	mRNA	TOT_030000946	NC_025262.1	1664630	1666716	D	TOT_030000946	join(<1664630..1665646,1665734..1665862,1665951..1666246,1666288..1666368,1666512..>1666716)	Theileria orientalis strain Shintoku	20716083
TOT_030000746	mRNA	TOT_030000746	NC_025262.1	1666805	1668024	R	TOT_030000746	complement(join(<1666805..1666819,1666837..>1668024))	Theileria orientalis strain Shintoku	20715899
TOT_030000747	mRNA	TOT_030000747	NC_025262.1	1668181	1672489	R	TOT_030000747	complement(join(<1668181..1668952,1669074..1669134,1669284..1669826,1669928..1670399,1670463..1670530,1670704..1671010,1671122..1671320,1671402..1671691,1671780..1671922,1671995..1672058,1672280..>1672489))	Theileria orientalis strain Shintoku	20715900
TOT_030000748	mRNA	TOT_030000748	NC_025262.1	1673521	1673964	D	TOT_030000748	<1673521..>1673964	Theileria orientalis strain Shintoku	20715901
TOT_030000749	mRNA	TOT_030000749	NC_025262.1	1679153	1680247	D	TOT_030000749	<1679153..>1680247	Theileria orientalis strain Shintoku	20715902
TOT_030000750	mRNA	TOT_030000750	NC_025262.1	1680532	1682541	R	TOT_030000750	complement(join(<1680532..1680607,1680836..>1682541))	Theileria orientalis strain Shintoku	20715903
TOT_030000751	mRNA	TOT_030000751	NC_025262.1	1683822	1685399	R	TOT_030000751	complement(<1683822..>1685399)	Theileria orientalis strain Shintoku	20715904
TOT_030000752	mRNA	TOT_030000752	NC_025262.1	1686344	1687966	R	TOT_030000752	complement(<1686344..>1687966)	Theileria orientalis strain Shintoku	20715905
TOT_030000753	mRNA	TOT_030000753	NC_025262.1	1688830	1690494	R	TOT_030000753	complement(join(<1688830..1689757,1689791..1689972,1690004..1690117,1690198..1690347,1690381..>1690494))	Theileria orientalis strain Shintoku	20715906
TOT_030000754	mRNA	TOT_030000754	NC_025262.1	1690619	1691176	D	TOT_030000754	join(<1690619..1690705,1690748..1690884,1690916..1691005,1691128..>1691176)	Theileria orientalis strain Shintoku	20715907
TOT_030000755	mRNA	TOT_030000755	NC_025262.1	1692062	1693359	D	TOT_030000755	join(<1692062..1692190,1692333..1692647,1692865..>1693359)	Theileria orientalis strain Shintoku	20715908
TOT_030000756	mRNA	TOT_030000756	NC_025262.1	1693889	1700700	D	TOT_030000756	join(<1693889..1694165,1694268..1694572,1694759..1694905,1695692..1696762,1697058..1697150,1697311..1697671,1697710..1697803,1697863..1697959,1698082..1698331,1698351..1698478,1698543..1698687,1698939..1699194,1699277..1699518,1699784..1700137,1700303..>1700700)	Theileria orientalis strain Shintoku	20715909
TOT_030000757	mRNA	TOT_030000757	NC_025262.1	1700826	1701314	R	TOT_030000757	complement(<1700826..>1701314)	Theileria orientalis strain Shintoku	20715910
TOT_030000758	mRNA	TOT_030000758	NC_025262.1	1701677	1701883	D	TOT_030000758	<1701677..>1701883	Theileria orientalis strain Shintoku	20715911
TOT_030000759	mRNA	TOT_030000759	NC_025262.1	1701985	1703235	R	TOT_030000759	complement(<1701985..>1703235)	Theileria orientalis strain Shintoku	20715912
TOT_030000760	mRNA	TOT_030000760	NC_025262.1	1703972	1704702	D	TOT_030000760	join(<1703972..1704265,1704457..>1704702)	Theileria orientalis strain Shintoku	20715913
TOT_030000761	mRNA	TOT_030000761	NC_025262.1	1705209	1708469	R	TOT_030000761	complement(<1705209..>1708469)	Theileria orientalis strain Shintoku	20715914
TOT_030000762	mRNA	TOT_030000762	NC_025262.1	1709955	1712384	R	TOT_030000762	complement(join(<1709955..1712164,1712339..>1712384))	Theileria orientalis strain Shintoku	20715915
TOT_030000763	mRNA	TOT_030000763	NC_025262.1	1713067	1714815	D	TOT_030000763	<1713067..>1714815	Theileria orientalis strain Shintoku	20715916
TOT_030000764	mRNA	TOT_030000764	NC_025262.1	1715080	1718188	R	TOT_030000764	complement(join(<1715080..1716578,1716720..1717071,1717154..>1718188))	Theileria orientalis strain Shintoku	20715917
TOT_030000765	mRNA	TOT_030000765	NC_025262.1	1718571	1719846	D	TOT_030000765	join(<1718571..1718647,1718726..1718798,1718881..1718937,1718999..1719063,1719302..1719583,1719708..>1719846)	Theileria orientalis strain Shintoku	20715918
TOT_030000766	mRNA	TOT_030000766	NC_025262.1	1719958	1721370	D	TOT_030000766	join(<1719958..1720098,1720291..1720494,1720670..1720880,1721087..1721229,1721311..>1721370)	Theileria orientalis strain Shintoku	20715919
TOT_030000767	mRNA	TOT_030000767	NC_025262.1	1721374	1727744	D	TOT_030000767	join(<1721374..1726965,1727199..1727306,1727622..>1727744)	Theileria orientalis strain Shintoku	20715920
TOT_030000947	mRNA	TOT_030000947	NC_025262.1	1727618	1728236	R	TOT_030000947	complement(join(<1727618..1727947,1728156..>1728236))	Theileria orientalis strain Shintoku	20716084
TOT_030000948	mRNA	TOT_030000948	NC_025262.1	1728438	1730387	R	TOT_030000948	complement(join(<1728438..1728758,1728936..1729735,1729817..1730043,1730269..>1730387))	Theileria orientalis strain Shintoku	20716085
TOT_030000770	mRNA	TOT_030000770	NC_025262.1	1730709	1733192	R	TOT_030000770	complement(join(<1730709..1730967,1731044..1731360,1731512..1731634,1732062..1732137,1732270..1732316,1732347..1732381,1732516..1732578,1732681..1732753,1732866..1733033,1733067..>1733192))	Theileria orientalis strain Shintoku	20715921
TOT_030000771	mRNA	TOT_030000771	NC_025262.1	1734228	1738834	D	TOT_030000771	join(<1734228..1736908,1737104..1737589,1737776..1738129,1738273..1738438,1738518..1738657,1738669..>1738834)	Theileria orientalis strain Shintoku	20715922
TOT_030000772	mRNA	TOT_030000772	NC_025262.1	1739055	1742458	D	TOT_030000772	join(<1739055..1739103,1739307..1739440,1739506..1739613,1739801..1739952,1740117..1740274,1740431..1740588,1740688..1740759,1740950..1740998,1741072..1741166,1741277..1741552,1741707..1741791,1741882..1742061,1742097..1742329,1742366..>1742458)	Theileria orientalis strain Shintoku	20715923
TOT_030000773	mRNA	TOT_030000773	NC_025262.1	1742889	1744059	R	TOT_030000773	complement(join(<1742889..1743251,1743399..1743814,1743873..>1744059))	Theileria orientalis strain Shintoku	20715924
TOT_030000774	mRNA	TOT_030000774	NC_025262.1	1744368	1745024	R	TOT_030000774	complement(<1744368..>1745024)	Theileria orientalis strain Shintoku	20715925
TOT_030000775	mRNA	TOT_030000775	NC_025262.1	1745818	1746671	R	TOT_030000775	complement(join(<1745818..1745931,1745965..1746052,1746117..1746223,1746455..1746541,1746615..>1746671))	Theileria orientalis strain Shintoku	20715926
TOT_030000776	mRNA	TOT_030000776	NC_025262.1	1746792	1747774	D	TOT_030000776	join(<1746792..1747030,1747106..1747215,1747251..1747356,1747387..1747635,1747666..>1747774)	Theileria orientalis strain Shintoku	20715927
TOT_030000777	mRNA	TOT_030000777	NC_025262.1	1747969	1749201	R	TOT_030000777	complement(join(<1747969..1748631,1748767..>1749201))	Theileria orientalis strain Shintoku	20715928
TOT_030000778	mRNA	TOT_030000778	NC_025262.1	1749500	1751980	R	TOT_030000778	complement(<1749500..>1751980)	Theileria orientalis strain Shintoku	20715929
TOT_030000779	mRNA	TOT_030000779	NC_025262.1	1752238	1754817	R	TOT_030000779	complement(<1752238..>1754817)	Theileria orientalis strain Shintoku	20715930
TOT_030000780	mRNA	TOT_030000780	NC_025262.1	1755221	1756543	D	TOT_030000780	<1755221..>1756543	Theileria orientalis strain Shintoku	20715931
TOT_030000781	mRNA	TOT_030000781	NC_025262.1	1756617	1759731	D	TOT_030000781	join(<1756617..1757625,1757728..1758605,1758803..1758903,1759039..1759144,1759254..1759394,1759543..>1759731)	Theileria orientalis strain Shintoku	20715932
TOT_030000783	mRNA	TOT_030000783	NC_025262.1	1761152	1764169	R	TOT_030000783	complement(join(<1761152..1762870,1762922..1763775,1764013..>1764169))	Theileria orientalis strain Shintoku	20715933
TOT_030000784	mRNA	TOT_030000784	NC_025262.1	1764436	1770336	D	TOT_030000784	join(<1764436..1764926,1764958..1765089,1765189..1765354,1765568..1765801,1765971..1766076,1766493..1766552,1766597..1766665,1766823..1767371,1768354..1768652,1769092..1769973,1770172..>1770336)	Theileria orientalis strain Shintoku	20715934
TOT_030000785	mRNA	TOT_030000785	NC_025262.1	1770746	1775365	R	TOT_030000785	complement(join(<1770746..1770813,1771187..1772060,1772586..1775219,1775231..>1775365))	Theileria orientalis strain Shintoku	20715935
TOT_030000786	mRNA	TOT_030000786	NC_025262.1	1775452	1778198	R	TOT_030000786	complement(join(<1775452..1775571,1775813..1778175,1778189..>1778198))	Theileria orientalis strain Shintoku	20715936
TOT_030000949	mRNA	TOT_030000949	NC_025262.1	1779616	1780002	D	TOT_030000949	<1779616..>1780002	Theileria orientalis strain Shintoku	20716086
TOT_030000788	mRNA	TOT_030000788	NC_025262.1	1779999	1780756	R	TOT_030000788	complement(join(<1779999..1780049,1780090..1780268,1780300..1780363,1780394..1780438,1780491..1780607,1780667..>1780756))	Theileria orientalis strain Shintoku	20715937
TOT_030000789	mRNA	TOT_030000789	NC_025262.1	1781175	1782382	D	TOT_030000789	join(<1781175..1781268,1781300..1782197,1782280..>1782382)	Theileria orientalis strain Shintoku	20715938
TOT_030000790	mRNA	TOT_030000790	NC_025262.1	1782909	1783484	R	TOT_030000790	complement(<1782909..>1783484)	Theileria orientalis strain Shintoku	20715939
TOT_030000791	mRNA	TOT_030000791	NC_025262.1	1783923	1784504	R	TOT_030000791	complement(<1783923..>1784504)	Theileria orientalis strain Shintoku	20715940
TOT_030000792	mRNA	TOT_030000792	NC_025262.1	1785148	1785756	D	TOT_030000792	<1785148..>1785756	Theileria orientalis strain Shintoku	20715941
TOT_030000793	mRNA	TOT_030000793	NC_025262.1	1786052	1789147	R	TOT_030000793	complement(join(<1786052..1786111,1786142..1786213,1786340..1786433,1786573..1786860,1786932..1787038,1787242..1787345,1787484..1787613,1787705..1787865,1788123..1788308,1788492..1788609,1788761..1788845,1789134..>1789147))	Theileria orientalis strain Shintoku	20715942
TOT_030000950	mRNA	TOT_030000950	NC_025262.1	1789227	1790126	R	TOT_030000950	complement(join(<1789227..1789895,1789935..>1790126))	Theileria orientalis strain Shintoku	20716087
TOT_030000795	mRNA	TOT_030000795	NC_025262.1	1790611	1791417	R	TOT_030000795	complement(join(<1790611..1790669,1790743..1790896,1791001..1791232,1791350..>1791417))	Theileria orientalis strain Shintoku	20715943
TOT_030000796	mRNA	TOT_030000796	NC_025262.1	1791523	1791900	R	TOT_030000796	complement(join(<1791523..1791613,1791730..1791815,1791889..>1791900))	Theileria orientalis strain Shintoku	20715944
TOT_030000797	mRNA	TOT_030000797	NC_025262.1	1792207	1792664	R	TOT_030000797	complement(join(<1792207..1792298,1792339..1792501,1792599..>1792664))	Theileria orientalis strain Shintoku	20715945
TOT_030000798	mRNA	TOT_030000798	NC_025262.1	1793070	1795892	R	TOT_030000798	complement(join(<1793070..1793156,1793190..1793245,1793283..1793324,1793358..1793445,1793535..1793714,1793802..1793897,1793915..1794460,1794491..1794613,1794751..1794941,1794973..1795113,1795202..1795403,1795437..1795485,1795546..1795654,1795766..>1795892))	Theileria orientalis strain Shintoku	20715946
TOT_030000799	mRNA	TOT_030000799	NC_025262.1	1795999	1798989	D	TOT_030000799	join(<1795999..1796226,1796264..1796455,1796485..1796558,1796584..1796903,1797168..1797453,1797617..1797800,1797968..1798126,1798228..1798335,1798368..1798522,1798610..1798673,1798804..>1798989)	Theileria orientalis strain Shintoku	20715947
TOT_030000800	mRNA	TOT_030000800	NC_025262.1	1799298	1800711	R	TOT_030000800	complement(join(<1799298..1800259,1800291..>1800711))	Theileria orientalis strain Shintoku	20715948
TOT_030000801	mRNA	TOT_030000801	NC_025262.1	1802876	1809483	D	TOT_030000801	join(<1802876..1809426,1809438..>1809483)	Theileria orientalis strain Shintoku	20715949
TOT_030000802	mRNA	TOT_030000802	NC_025262.1	1810581	1812163	D	TOT_030000802	join(<1810581..1812005,1812065..>1812163)	Theileria orientalis strain Shintoku	20715950
TOT_030000803	mRNA	TOT_030000803	NC_025262.1	1812718	1814127	D	TOT_030000803	<1812718..>1814127	Theileria orientalis strain Shintoku	20715951
TOT_030000804	mRNA	TOT_030000804	NC_025262.1	1814360	1818167	R	TOT_030000804	complement(join(<1814360..1814632,1814747..1815175,1815224..1815333,1815387..1815466,1815526..1815633,1815977..1816589,1816791..1817110,1817204..1817671,1817710..>1818167))	Theileria orientalis strain Shintoku	20715952
TOT_030000805	mRNA	TOT_030000805	NC_025262.1	1818452	1818889	R	TOT_030000805	complement(<1818452..>1818889)	Theileria orientalis strain Shintoku	20715953
TOT_030000806	mRNA	TOT_030000806	NC_025262.1	1819304	1823980	R	TOT_030000806	complement(join(<1819304..1820360,1820496..1821419,1821564..1821805,1821869..1822193,1822287..1822949,1823049..>1823980))	Theileria orientalis strain Shintoku	20715954
TOT_030000807	mRNA	TOT_030000807	NC_025262.1	1824421	1825390	R	TOT_030000807	complement(join(<1824421..1824507,1824538..1824597,1824629..1824709,1824841..1824927,1825032..1825099,1825246..>1825390))	Theileria orientalis strain Shintoku	20715955
TOT_030000808	mRNA	TOT_030000808	NC_025262.1	1825798	1826997	R	TOT_030000808	complement(join(<1825798..1826894,1826982..>1826997))	Theileria orientalis strain Shintoku	20715956
TOT_030000809	mRNA	TOT_030000809	NC_025262.1	1827556	1829679	D	TOT_030000809	join(<1827556..1828002,1828109..1828161,1828235..1828359,1828428..1828467,1828501..1828657,1828689..1828741,1828807..1828892,1829025..1829498,1829519..>1829679)	Theileria orientalis strain Shintoku	20715957
TOT_030000810	mRNA	TOT_030000810	NC_025262.1	1829886	1832130	D	TOT_030000810	join(<1829886..1830344,1830504..1830605,1830855..1831630,1831764..>1832130)	Theileria orientalis strain Shintoku	20715958
TOT_030000811	mRNA	TOT_030000811	NC_025262.1	1832654	1833517	D	TOT_030000811	<1832654..>1833517	Theileria orientalis strain Shintoku	20715959
TOT_030000812	mRNA	TOT_030000812	NC_025262.1	1834159	1834852	D	TOT_030000812	join(<1834159..1834206,1834237..1834265,1834313..1834377,1834424..1834485,1834516..1834572,1834745..1834783,1834814..>1834852)	Theileria orientalis strain Shintoku	20715960
TOT_030000813	mRNA	TOT_030000813	NC_025262.1	1835494	1835913	D	TOT_030000813	join(<1835494..1835660,1835832..>1835913)	Theileria orientalis strain Shintoku	20715961
TOT_030000888	mRNA	TOT_030000888	NC_025262.1	1836406	1837232	D	TOT_030000888	join(<1836406..1836469,1836574..1836836,1837002..>1837232)	Theileria orientalis strain Shintoku	20716025
TOT_030000815	mRNA	TOT_030000815	NC_025262.1	1837808	1839513	R	TOT_030000815	complement(join(<1837808..1839452,1839461..>1839513))	Theileria orientalis strain Shintoku	20715962
TOT_030000816	mRNA	TOT_030000816	NC_025262.1	1839701	1839973	D	TOT_030000816	join(<1839701..1839763,1839893..>1839973)	Theileria orientalis strain Shintoku	20715963
TOT_030000817	mRNA	TOT_030000817	NC_025262.1	1843016	1843701	R	TOT_030000817	complement(join(<1843016..1843141,1843255..1843407,1843522..>1843701))	Theileria orientalis strain Shintoku	20715964
TOT_030000818	mRNA	TOT_030000818	NC_025262.1	1844331	1845422	R	TOT_030000818	complement(join(<1844331..1844553,1844629..>1845422))	Theileria orientalis strain Shintoku	20715965
TOT_030000951	mRNA	TOT_030000951	NC_025262.1	1846278	1853720	R	TOT_030000951	complement(join(<1846278..1846645,1846731..1846998,1847176..1847713,1848102..1848351,1848587..1848883,1849140..1849468,1849553..1850451,1850500..1850510,1850710..1850988,1851080..1851336,1851602..1851786,1851957..1852096,1852251..1852650,1852714..1852986,1853062..1853343,1853481..>1853720))	Theileria orientalis strain Shintoku	20716088
TOT_030000820	mRNA	TOT_030000820	NC_025262.1	1854359	1854543	D	TOT_030000820	join(<1854359..1854449,1854479..>1854543)	Theileria orientalis strain Shintoku	20715966
TOT_030000952	mRNA	TOT_030000952	NC_025262.1	1854684	1854842	R	TOT_030000952	complement(<1854684..>1854842)	Theileria orientalis strain Shintoku	20716089
TOT_030000822	mRNA	TOT_030000822	NC_025262.1	1855575	1857282	D	TOT_030000822	join(<1855575..1855715,1855827..1856412,1856599..1856899,1857051..>1857282)	Theileria orientalis strain Shintoku	20715967
TOT_030000953	mRNA	TOT_030000953	NC_025262.1	1857568	1859072	R	TOT_030000953	complement(join(<1857568..1857707,1858004..1858052,1858155..1858312,1858428..1858653,1858797..>1859072))	Theileria orientalis strain Shintoku	20716090
TOT_030000824	mRNA	TOT_030000824	NC_025262.1	1859108	1859324	D	TOT_030000824	join(<1859108..1859201,1859284..>1859324)	Theileria orientalis strain Shintoku	20715968
TOT_030000825	mRNA	TOT_030000825	NC_025262.1	1859364	1861874	R	TOT_030000825	complement(join(<1859364..1859572,1859964..1860371,1860582..1860806,1860981..1861589,1861856..>1861874))	Theileria orientalis strain Shintoku	20715969
TOT_030000826	mRNA	TOT_030000826	NC_025262.1	1862396	1863511	D	TOT_030000826	<1862396..>1863511	Theileria orientalis strain Shintoku	20715970
TOT_030000827	mRNA	TOT_030000827	NC_025262.1	1865588	1868059	R	TOT_030000827	complement(join(<1865588..1867688,1867769..1867844,1867924..>1868059))	Theileria orientalis strain Shintoku	20715971
TOT_030000828	mRNA	TOT_030000828	NC_025262.1	1868979	1870956	R	TOT_030000828	complement(join(<1868979..1869312,1869409..1869539,1869612..1869929,1870082..1870234,1870294..1870351,1870449..1870636,1870849..>1870956))	Theileria orientalis strain Shintoku	20715972
TOT_030000829	mRNA	TOT_030000829	NC_025262.1	1871983	1873848	D	TOT_030000829	join(<1871983..1873244,1873344..>1873848)	Theileria orientalis strain Shintoku	20715973
TOT_030000830	mRNA	TOT_030000830	NC_025262.1	1873904	1874224	R	TOT_030000830	complement(<1873904..>1874224)	Theileria orientalis strain Shintoku	20715974
TOT_030000831	mRNA	TOT_030000831	NC_025262.1	1875023	1875789	R	TOT_030000831	complement(join(<1875023..1875149,1875230..>1875789))	Theileria orientalis strain Shintoku	20715975
TOT_030000832	mRNA	TOT_030000832	NC_025262.1	1877128	1879407	D	TOT_030000832	<1877128..>1879407	Theileria orientalis strain Shintoku	20715976
TOT_030000833	mRNA	TOT_030000833	NC_025262.1	1879625	1880055	D	TOT_030000833	join(<1879625..1879695,1879938..>1880055)	Theileria orientalis strain Shintoku	20715977
TOT_030000834	mRNA	TOT_030000834	NC_025262.1	1880074	1883018	D	TOT_030000834	join(<1880074..1880797,1880928..1881808,1882076..1882141,1882259..1882349,1882459..1882621,1882716..1882796,1882901..>1883018)	Theileria orientalis strain Shintoku	20715978
TOT_030000835	mRNA	TOT_030000835	NC_025262.1	1883437	1883984	R	TOT_030000835	complement(join(<1883437..1883498,1883637..1883681,1883786..>1883984))	Theileria orientalis strain Shintoku	20715979
TOT_030000836	mRNA	TOT_030000836	NC_025262.1	1884302	1884640	R	TOT_030000836	complement(<1884302..>1884640)	Theileria orientalis strain Shintoku	20715980
TOT_030000837	mRNA	TOT_030000837	NC_025262.1	1885218	1886713	R	TOT_030000837	complement(join(<1885218..1885254,1885347..1885528,1885676..>1886713))	Theileria orientalis strain Shintoku	20715981
TOT_030000838	mRNA	TOT_030000838	NC_025262.1	1887090	1889031	D	TOT_030000838	join(<1887090..1887163,1887282..1887329,1887418..1887550,1887583..1887665,1887769..1887928,1888055..1888198,1888331..1888391,1888490..1888628,1888740..1888878,1889002..>1889031)	Theileria orientalis strain Shintoku	20715982
TOT_030000839	mRNA	TOT_030000839	NC_025262.1	1889574	1891737	D	TOT_030000839	join(<1889574..1889847,1889885..1890115,1890133..1890258,1890343..1890572,1890753..1890839,1890982..1891082,1891217..1891281,1891371..1891493,1891568..>1891737)	Theileria orientalis strain Shintoku	20715983
TOT_030000840	mRNA	TOT_030000840	NC_025262.1	1891872	1900093	R	TOT_030000840	complement(join(<1891872..1891907,1891949..>1900093))	Theileria orientalis strain Shintoku	20715984
TOT_030000841	mRNA	TOT_030000841	NC_025262.1	1902203	1908148	D	TOT_030000841	<1902203..>1908148	Theileria orientalis strain Shintoku	20715985
TOT_030000842	mRNA	TOT_030000842	NC_025262.1	1908768	1909934	D	TOT_030000842	<1908768..>1909934	Theileria orientalis strain Shintoku	20715986
TOT_030000843	mRNA	TOT_030000843	NC_025262.1	1910095	1912115	R	TOT_030000843	complement(join(<1910095..1910122,1910663..1912004,1912094..>1912115))	Theileria orientalis strain Shintoku	20715987
TOT_030000844	mRNA	TOT_030000844	NC_025262.1	1913016	1915009	D	TOT_030000844	join(<1913016..1913734,1914132..1914833,1914991..>1915009)	Theileria orientalis strain Shintoku	20715988
TOT_030000845	mRNA	TOT_030000845	NC_025262.1	1915318	1916111	D	TOT_030000845	join(<1915318..1915989,1916007..>1916111)	Theileria orientalis strain Shintoku	20715989
TOT_030000846	mRNA	TOT_030000846	NC_025262.1	1916571	1918164	D	TOT_030000846	join(<1916571..1917171,1917346..1917616,1918065..>1918164)	Theileria orientalis strain Shintoku	20715990
TOT_030000847	mRNA	TOT_030000847	NC_025262.1	1918461	1923593	D	TOT_030000847	join(<1918461..1919880,1919935..>1923593)	Theileria orientalis strain Shintoku	20715991
TOT_030000848	mRNA	TOT_030000848	NC_025262.1	1923613	1923921	R	TOT_030000848	complement(join(<1923613..1923721,1923851..>1923921))	Theileria orientalis strain Shintoku	20715992
TOT_030000849	mRNA	TOT_030000849	NC_025262.1	1924278	1925280	R	TOT_030000849	complement(join(<1924278..1924338,1924383..1924474,1924585..1925025,1925179..>1925280))	Theileria orientalis strain Shintoku	20715993
TOT_030000850	mRNA	TOT_030000850	NC_025262.1	1925320	1928068	R	TOT_030000850	complement(join(<1925320..1925344,1925355..1925892,1925972..1926195,1926296..1926812,1926898..1926969,1927024..>1928068))	Theileria orientalis strain Shintoku	20715994
TOT_030000851	mRNA	TOT_030000851	NC_025262.1	1928453	1928925	R	TOT_030000851	complement(join(<1928453..1928639,1928717..1928806,1928852..>1928925))	Theileria orientalis strain Shintoku	20715995
TOT_030000852	mRNA	TOT_030000852	NC_025262.1	1929987	1930956	D	TOT_030000852	join(<1929987..1930256,1930324..1930407,1930504..>1930956)	Theileria orientalis strain Shintoku	20715996
TOT_030000853	mRNA	TOT_030000853	NC_025262.1	1931184	1934125	D	TOT_030000853	join(<1931184..1931192,1931328..1931474,1931598..1931720,1931877..1932003,1932263..1932520,1932616..1932809,1932883..1932943,1933048..1933173,1933296..1933441,1933621..1933722,1933949..>1934125)	Theileria orientalis strain Shintoku	20715997
TOT_030000854	mRNA	TOT_030000854	NC_025262.1	1934372	1935427	R	TOT_030000854	complement(<1934372..>1935427)	Theileria orientalis strain Shintoku	20715998
TOT_030000855	mRNA	TOT_030000855	NC_025262.1	1936083	1937585	D	TOT_030000855	<1936083..>1937585	Theileria orientalis strain Shintoku	20715999
TOT_030000856	mRNA	TOT_030000856	NC_025262.1	1937641	1938666	R	TOT_030000856	complement(<1937641..>1938666)	Theileria orientalis strain Shintoku	20716000
TOT_030000857	mRNA	TOT_030000857	NC_025262.1	1939003	1940301	D	TOT_030000857	join(<1939003..1939041,1939078..1939182,1939305..1939416,1939499..1939676,1939769..1939924,1940013..1940202,1940242..>1940301)	Theileria orientalis strain Shintoku	20716001
TOT_030000858	mRNA	TOT_030000858	NC_025262.1	1940418	1942782	R	TOT_030000858	complement(join(<1940418..1940486,1940517..1940582,1940648..1940684,1940795..1940884,1940984..1941051,1941123..1941195,1941227..1941397,1941469..1941518,1941550..1941606,1941636..1941667,1941738..1941942,1942035..1942556,1942621..>1942782))	Theileria orientalis strain Shintoku	20716002
TOT_030000860	mRNA	TOT_030000860	NC_025262.1	1943176	1945467	D	TOT_030000860	join(<1943176..1943429,1943466..1945332,1945372..>1945467)	Theileria orientalis strain Shintoku	20716003
TOT_030000861	mRNA	TOT_030000861	NC_025262.1	1946034	1947278	D	TOT_030000861	<1946034..>1947278	Theileria orientalis strain Shintoku	20716004
TOT_030000862	mRNA	TOT_030000862	NC_025262.1	1947364	1947793	R	TOT_030000862	complement(join(<1947364..1947513,1947662..>1947793))	Theileria orientalis strain Shintoku	20716005
TOT_030000863	mRNA	TOT_030000863	NC_025262.1	1947843	1949418	R	TOT_030000863	complement(join(<1947843..1948039,1948130..1948440,1948489..1948649,1948706..1948792,1948823..1949010,1949138..1949230,1949361..>1949418))	Theileria orientalis strain Shintoku	20716006
TOT_030000954	mRNA	TOT_030000954	NC_025262.1	1949655	1951166	D	TOT_030000954	join(<1949655..1950113,1950228..1950392,1950491..1950595,1950684..1950802,1950863..>1951166)	Theileria orientalis strain Shintoku	20716091
TOT_030000955	mRNA	TOT_030000955	NC_025262.1	1951547	1953255	D	TOT_030000955	join(<1951547..1951642,1951673..1951732,1951830..1951903,1952000..1952116,1952374..1952695,1952838..1953061,1953153..>1953255)	Theileria orientalis strain Shintoku	20716092
TOT_030000956	mRNA	TOT_030000956	NC_025262.1	1953463	1956034	D	TOT_030000956	join(<1953463..1953579,1953666..1953995,1954053..1954544,1954707..1955218,1955353..1955422,1955453..1955568,1955699..1955842,1955923..>1956034)	Theileria orientalis strain Shintoku	20716093
TOT_030000867	mRNA	TOT_030000867	NC_025262.1	1956150	1956650	R	TOT_030000867	complement(<1956150..>1956650)	Theileria orientalis strain Shintoku	20716007
TOT_030000868	mRNA	TOT_030000868	NC_025262.1	1956732	1958748	D	TOT_030000868	join(<1956732..1956972,1957004..1957149,1957183..1957247,1957278..1957468,1957660..1957769,1957803..1957983,1958072..1958283,1958338..1958406,1958533..>1958748)	Theileria orientalis strain Shintoku	20716008
TOT_030000869	mRNA	TOT_030000869	NC_025262.1	1958956	1959372	R	TOT_030000869	complement(join(<1958956..1959265,1959347..>1959372))	Theileria orientalis strain Shintoku	20716009
TOT_030000870	mRNA	TOT_030000870	NC_025262.1	1960357	1963300	D	TOT_030000870	join(<1960357..1960422,1960436..>1963300)	Theileria orientalis strain Shintoku	20716010
TOT_030000871	mRNA	TOT_030000871	NC_025262.1	1963815	1967633	R	TOT_030000871	complement(<1963815..>1967633)	Theileria orientalis strain Shintoku	20716011
TOT_030000872	mRNA	TOT_030000872	NC_025262.1	1968063	1969966	R	TOT_030000872	complement(join(<1968063..1968201,1968259..1968697,1968804..1969007,1969081..>1969966))	Theileria orientalis strain Shintoku	20716012
TOT_030000873	mRNA	TOT_030000873	NC_025262.1	1971115	1971612	R	TOT_030000873	complement(<1971115..>1971612)	Theileria orientalis strain Shintoku	20716013
TOT_030000874	mRNA	TOT_030000874	NC_025262.1	1972187	1974103	R	TOT_030000874	complement(<1972187..>1974103)	Theileria orientalis strain Shintoku	20716014
TOT_030000875	mRNA	TOT_030000875	NC_025262.1	1974732	1975634	R	TOT_030000875	complement(<1974732..>1975634)	Theileria orientalis strain Shintoku	20716015
TOT_030000876	mRNA	TOT_030000876	NC_025262.1	1976284	1976754	R	TOT_030000876	complement(<1976284..>1976754)	Theileria orientalis strain Shintoku	20716016
TOT_030000877	mRNA	TOT_030000877	NC_025262.1	1977141	1979864	R	TOT_030000877	complement(<1977141..>1979864)	Theileria orientalis strain Shintoku	20716017
TOT_030000878	mRNA	TOT_030000878	NC_025262.1	1980649	1981374	R	TOT_030000878	complement(<1980649..>1981374)	Theileria orientalis strain Shintoku	20716018
TOT_030000879	mRNA	TOT_030000879	NC_025262.1	1981811	1986137	R	TOT_030000879	complement(join(<1981811..1981948,1981978..1985016,1985397..>1986137))	Theileria orientalis strain Shintoku	20716019
TOT_030000880	mRNA	TOT_030000880	NC_025262.1	1986672	1989144	R	TOT_030000880	complement(join(<1986672..1988520,1988537..1988577,1988699..1988946,1989051..>1989144))	Theileria orientalis strain Shintoku	20716020
TOT_030000881	mRNA	TOT_030000881	NC_025262.1	1989809	1992174	D	TOT_030000881	join(<1989809..1990859,1991170..1991999,1992061..>1992174)	Theileria orientalis strain Shintoku	20716021
TOT_030000882	mRNA	TOT_030000882	NC_025262.1	1992054	1992161	R	TOT_030000882	complement(<1992054..>1992161)	Theileria orientalis strain Shintoku	20716022
TOT_030000883	mRNA	TOT_030000883	NC_025262.1	1992185	1998189	R	TOT_030000883	complement(join(<1992185..1992314,1992537..1997912,1998155..>1998189))	Theileria orientalis strain Shintoku	20716023
TOT_040000001	mRNA	TOT_040000001	NC_025263.1	904	1065	R	TOT_040000001	complement(<904..>1065)	Theileria orientalis strain Shintoku	20716107
TOT_040000002	mRNA	TOT_040000002	NC_025263.1	1452	2519	D	TOT_040000002	<1452..>2519	Theileria orientalis strain Shintoku	20716108
TOT_040000003	mRNA	TOT_040000003	NC_025263.1	2683	2989	R	TOT_040000003	complement(join(<2683..2844,2864..>2989))	Theileria orientalis strain Shintoku	20716109
TOT_040000004	mRNA	TOT_040000004	NC_025263.1	2997	3197	R	TOT_040000004	complement(<2997..>3197)	Theileria orientalis strain Shintoku	20716110
TOT_040000005	mRNA	TOT_040000005	NC_025263.1	3206	5584	D	TOT_040000005	<3206..>5584	Theileria orientalis strain Shintoku	20716111
TOT_040000006	mRNA	TOT_040000006	NC_025263.1	6983	11563	R	TOT_040000006	complement(<6983..>11563)	Theileria orientalis strain Shintoku	20716112
TOT_040000911	mRNA	TOT_040000911	NC_025263.1	11996	12082	D	TOT_040000911	<11996..>12082	Theileria orientalis strain Shintoku	20716931
TOT_040000008	mRNA	TOT_040000008	NC_025263.1	12934	17457	R	TOT_040000008	complement(<12934..>17457)	Theileria orientalis strain Shintoku	20716113
TOT_040000009	mRNA	TOT_040000009	NC_025263.1	17822	18506	R	TOT_040000009	complement(join(<17822..17865,18410..>18506))	Theileria orientalis strain Shintoku	20716114
TOT_040000010	mRNA	TOT_040000010	NC_025263.1	18855	27477	R	TOT_040000010	complement(join(<18855..19471,20699..20758,21211..21396,25215..>27477))	Theileria orientalis strain Shintoku	20716115
TOT_040000011	mRNA	TOT_040000011	NC_025263.1	28824	29185	D	TOT_040000011	join(<28824..28942,29032..>29185)	Theileria orientalis strain Shintoku	20716116
TOT_040000012	mRNA	TOT_040000012	NC_025263.1	29432	29905	R	TOT_040000012	complement(join(<29432..29508,29755..>29905))	Theileria orientalis strain Shintoku	20716117
TOT_040000013	mRNA	TOT_040000013	NC_025263.1	29907	30467	D	TOT_040000013	join(<29907..29929,30353..>30467)	Theileria orientalis strain Shintoku	20716118
TOT_040000014	mRNA	TOT_040000014	NC_025263.1	30671	30838	R	TOT_040000014	complement(<30671..>30838)	Theileria orientalis strain Shintoku	20716119
TOT_040000015	mRNA	TOT_040000015	NC_025263.1	30880	33390	D	TOT_040000015	<30880..>33390	Theileria orientalis strain Shintoku	20716120
TOT_040000016	mRNA	TOT_040000016	NC_025263.1	35752	37209	D	TOT_040000016	<35752..>37209	Theileria orientalis strain Shintoku	20716121
TOT_040000017	mRNA	TOT_040000017	NC_025263.1	38525	43024	R	TOT_040000017	complement(join(<38525..42464,42540..>43024))	Theileria orientalis strain Shintoku	20716122
TOT_040000018	mRNA	TOT_040000018	NC_025263.1	44231	45247	D	TOT_040000018	join(<44231..44274,45127..>45247)	Theileria orientalis strain Shintoku	20716123
TOT_040000019	mRNA	TOT_040000019	NC_025263.1	45267	45437	D	TOT_040000019	<45267..>45437	Theileria orientalis strain Shintoku	20716124
TOT_040000020	mRNA	TOT_040000020	NC_025263.1	46571	54971	D	TOT_040000020	join(<46571..54593,54741..54908,54937..>54971)	Theileria orientalis strain Shintoku	20716125
TOT_040000021	mRNA	TOT_040000021	NC_025263.1	56424	57857	D	TOT_040000021	<56424..>57857	Theileria orientalis strain Shintoku	20716126
TOT_040000022	mRNA	TOT_040000022	NC_025263.1	59197	63738	D	TOT_040000022	join(<59197..59696,59796..>63738)	Theileria orientalis strain Shintoku	20716127
TOT_040000023	mRNA	TOT_040000023	NC_025263.1	64222	65772	R	TOT_040000023	complement(<64222..>65772)	Theileria orientalis strain Shintoku	20716128
TOT_040000024	mRNA	TOT_040000024	NC_025263.1	66219	67190	R	TOT_040000024	complement(<66219..>67190)	Theileria orientalis strain Shintoku	20716129
TOT_040000025	mRNA	TOT_040000025	NC_025263.1	68354	69518	R	TOT_040000025	complement(join(<68354..69232,69444..>69518))	Theileria orientalis strain Shintoku	20716130
TOT_040000026	mRNA	TOT_040000026	NC_025263.1	69691	75027	R	TOT_040000026	complement(join(<69691..70105,70199..72082,72125..72223,72296..73597,73631..74040,74128..74602,74903..>75027))	Theileria orientalis strain Shintoku	20716131
TOT_040000027	mRNA	TOT_040000027	NC_025263.1	75162	76329	R	TOT_040000027	complement(join(<75162..75250,75278..75495,75546..75676,75706..>76329))	Theileria orientalis strain Shintoku	20716132
TOT_040000028	mRNA	TOT_040000028	NC_025263.1	76855	77902	D	TOT_040000028	join(<76855..77041,77074..77286,77316..>77902)	Theileria orientalis strain Shintoku	20716133
TOT_040000029	mRNA	TOT_040000029	NC_025263.1	78175	79004	R	TOT_040000029	complement(join(<78175..78240,78273..78347,78380..78523,78608..78689,78720..78827,78862..>79004))	Theileria orientalis strain Shintoku	20716134
TOT_040000030	mRNA	TOT_040000030	NC_025263.1	79242	79955	D	TOT_040000030	<79242..>79955	Theileria orientalis strain Shintoku	20716135
TOT_040000031	mRNA	TOT_040000031	NC_025263.1	80001	80469	R	TOT_040000031	complement(join(<80001..80193,80227..80314,80391..>80469))	Theileria orientalis strain Shintoku	20716136
TOT_040000032	mRNA	TOT_040000032	NC_025263.1	81474	81985	D	TOT_040000032	join(<81474..81483,81541..81716,81770..>81985)	Theileria orientalis strain Shintoku	20716137
TOT_040000033	mRNA	TOT_040000033	NC_025263.1	82279	84422	D	TOT_040000033	join(<82279..82301,82413..82922,83060..83357,83541..84155,84240..>84422)	Theileria orientalis strain Shintoku	20716138
TOT_040000034	mRNA	TOT_040000034	NC_025263.1	84754	88236	D	TOT_040000034	join(<84754..87543,87592..>88236)	Theileria orientalis strain Shintoku	20716139
TOT_040000035	mRNA	TOT_040000035	NC_025263.1	88340	88916	R	TOT_040000035	complement(join(<88340..88791,88856..>88916))	Theileria orientalis strain Shintoku	20716140
TOT_040000912	mRNA	TOT_040000912	NC_025263.1	89163	90725	R	TOT_040000912	complement(join(<89163..90430,90509..>90725))	Theileria orientalis strain Shintoku	20716932
TOT_040000037	mRNA	TOT_040000037	NC_025263.1	92140	92259	R	TOT_040000037	complement(<92140..>92259)	Theileria orientalis strain Shintoku	20716141
TOT_040000038	mRNA	TOT_040000038	NC_025263.1	92303	92920	D	TOT_040000038	join(<92303..92428,92460..92625,92656..92908,92914..>92920)	Theileria orientalis strain Shintoku	20716142
TOT_040000039	mRNA	TOT_040000039	NC_025263.1	97577	98069	R	TOT_040000039	complement(join(<97577..97590,97625..>98069))	Theileria orientalis strain Shintoku	20716143
TOT_040000040	mRNA	TOT_040000040	NC_025263.1	98525	99601	D	TOT_040000040	<98525..>99601	Theileria orientalis strain Shintoku	20716144
TOT_040000041	mRNA	TOT_040000041	NC_025263.1	99809	101118	R	TOT_040000041	complement(join(<99809..100532,100574..>101118))	Theileria orientalis strain Shintoku	20716145
TOT_040000042	mRNA	TOT_040000042	NC_025263.1	101594	104198	D	TOT_040000042	join(<101594..101804,101845..102078,102109..102946,102977..103530,103639..103847,103878..>104198)	Theileria orientalis strain Shintoku	20716146
TOT_040000043	mRNA	TOT_040000043	NC_025263.1	104547	106973	D	TOT_040000043	<104547..>106973	Theileria orientalis strain Shintoku	20716147
TOT_040000044	mRNA	TOT_040000044	NC_025263.1	107157	107369	D	TOT_040000044	<107157..>107369	Theileria orientalis strain Shintoku	20716148
TOT_040000045	mRNA	TOT_040000045	NC_025263.1	107698	108718	D	TOT_040000045	join(<107698..107839,107916..>108718)	Theileria orientalis strain Shintoku	20716149
TOT_040000046	mRNA	TOT_040000046	NC_025263.1	108777	109395	R	TOT_040000046	complement(join(<108777..108831,108868..108959,108990..109145,109245..109298,109333..>109395))	Theileria orientalis strain Shintoku	20716150
TOT_040000047	mRNA	TOT_040000047	NC_025263.1	109577	110232	R	TOT_040000047	complement(join(<109577..109698,109709..109928,109975..>110232))	Theileria orientalis strain Shintoku	20716151
TOT_040000048	mRNA	TOT_040000048	NC_025263.1	110581	112387	R	TOT_040000048	complement(join(<110581..110745,110776..110957,110989..111315,111471..111965,111997..>112387))	Theileria orientalis strain Shintoku	20716152
TOT_040000049	mRNA	TOT_040000049	NC_025263.1	112669	114263	R	TOT_040000049	complement(join(<112669..113298,113436..113677,113768..113872,113937..114084,114132..>114263))	Theileria orientalis strain Shintoku	20716153
TOT_040000050	mRNA	TOT_040000050	NC_025263.1	114758	115257	D	TOT_040000050	join(<114758..114884,114918..115021,115099..>115257)	Theileria orientalis strain Shintoku	20716154
TOT_040000051	mRNA	TOT_040000051	NC_025263.1	115681	116051	R	TOT_040000051	complement(join(<115681..115729,115797..115933,116034..>116051))	Theileria orientalis strain Shintoku	20716155
TOT_040000052	mRNA	TOT_040000052	NC_025263.1	116341	116972	D	TOT_040000052	join(<116341..116548,116581..>116972)	Theileria orientalis strain Shintoku	20716156
TOT_040000053	mRNA	TOT_040000053	NC_025263.1	117017	121064	D	TOT_040000053	join(<117017..117047,117099..117219,117251..117332,117369..117728,117758..117981,118033..118124,118194..118342,118395..118486,118534..118605,118635..119438,119525..120281,120345..120436,120713..>121064)	Theileria orientalis strain Shintoku	20716157
TOT_040000054	mRNA	TOT_040000054	NC_025263.1	121150	123867	R	TOT_040000054	complement(join(<121150..121893,122011..>123867))	Theileria orientalis strain Shintoku	20716158
TOT_040000055	mRNA	TOT_040000055	NC_025263.1	123964	125130	R	TOT_040000055	complement(<123964..>125130)	Theileria orientalis strain Shintoku	20716159
TOT_040000056	mRNA	TOT_040000056	NC_025263.1	125644	130177	R	TOT_040000056	complement(join(<125644..125749,125780..125913,125944..126072,126103..126308,126382..126973,127055..128866,128915..>130177))	Theileria orientalis strain Shintoku	20716160
TOT_040000057	mRNA	TOT_040000057	NC_025263.1	131185	134610	D	TOT_040000057	<131185..>134610	Theileria orientalis strain Shintoku	20716161
TOT_040000058	mRNA	TOT_040000058	NC_025263.1	134756	136041	R	TOT_040000058	complement(join(<134756..134992,135025..135085,135139..135449,135476..135604,135636..135686,135718..135901,135950..>136041))	Theileria orientalis strain Shintoku	20716162
TOT_040000059	mRNA	TOT_040000059	NC_025263.1	136215	138288	R	TOT_040000059	complement(join(<136215..136349,136380..136444,136450..136772,136802..137116,137148..137316,137373..137896,137930..138075,138139..>138288))	Theileria orientalis strain Shintoku	20716163
TOT_040000060	mRNA	TOT_040000060	NC_025263.1	138397	140472	R	TOT_040000060	complement(<138397..>140472)	Theileria orientalis strain Shintoku	20716164
TOT_040000061	mRNA	TOT_040000061	NC_025263.1	140713	142203	D	TOT_040000061	join(<140713..141577,141655..141890,141955..>142203)	Theileria orientalis strain Shintoku	20716165
TOT_040000062	mRNA	TOT_040000062	NC_025263.1	142276	144383	R	TOT_040000062	complement(join(<142276..142384,142493..142770,142914..143249,143364..143492,143534..143716,143796..>144383))	Theileria orientalis strain Shintoku	20716166
TOT_040000063	mRNA	TOT_040000063	NC_025263.1	144426	152037	R	TOT_040000063	complement(join(<144426..144914,144944..145179,145212..145293,145918..146011,146167..147268,147446..147769,147821..149396,149442..151211,151242..151350,151381..151493,151524..151648,151680..>152037))	Theileria orientalis strain Shintoku	20716167
TOT_040000064	mRNA	TOT_040000064	NC_025263.1	152538	154882	D	TOT_040000064	join(<152538..152941,152972..153111,153163..153355,153425..153595,153627..153686,153720..154112,154147..154269,154472..154591,154720..>154882)	Theileria orientalis strain Shintoku	20716168
TOT_040000065	mRNA	TOT_040000065	NC_025263.1	155157	155457	R	TOT_040000065	complement(join(<155157..155240,155374..>155457))	Theileria orientalis strain Shintoku	20716169
TOT_040000066	mRNA	TOT_040000066	NC_025263.1	156406	158178	D	TOT_040000066	<156406..>158178	Theileria orientalis strain Shintoku	20716170
TOT_040000067	mRNA	TOT_040000067	NC_025263.1	158384	160562	D	TOT_040000067	join(<158384..158441,158474..158582,158625..158754,158786..159073,159104..159250,159282..159358,159390..160026,160057..160155,160187..160322,160354..>160562)	Theileria orientalis strain Shintoku	20716171
TOT_040000068	mRNA	TOT_040000068	NC_025263.1	160765	162868	D	TOT_040000068	join(<160765..162594,162637..162691,162724..162761,162794..>162868)	Theileria orientalis strain Shintoku	20716172
TOT_040000069	mRNA	TOT_040000069	NC_025263.1	162891	163989	D	TOT_040000069	join(<162891..162944,162987..163118,163151..163427,163459..163485,163519..163617,163657..163736,163772..163843,163879..>163989)	Theileria orientalis strain Shintoku	20716173
TOT_040000070	mRNA	TOT_040000070	NC_025263.1	164535	169241	D	TOT_040000070	join(<164535..167883,168154..>169241)	Theileria orientalis strain Shintoku	20716174
TOT_040000071	mRNA	TOT_040000071	NC_025263.1	169246	169752	R	TOT_040000071	complement(<169246..>169752)	Theileria orientalis strain Shintoku	20716175
TOT_040000072	mRNA	TOT_040000072	NC_025263.1	170450	173948	D	TOT_040000072	join(<170450..170797,170833..173541,173573..173674,173706..>173948)	Theileria orientalis strain Shintoku	20716176
TOT_040000913	mRNA	TOT_040000913	NC_025263.1	174051	174902	R	TOT_040000913	complement(join(<174051..174455,174567..174648,174679..>174902))	Theileria orientalis strain Shintoku	20716933
TOT_040000914	mRNA	TOT_040000914	NC_025263.1	174938	176133	R	TOT_040000914	complement(join(<174938..175027,175063..175142,175177..175252,175288..175335,175367..175447,175480..>176133))	Theileria orientalis strain Shintoku	20716934
TOT_040000075	mRNA	TOT_040000075	NC_025263.1	176309	176938	D	TOT_040000075	<176309..>176938	Theileria orientalis strain Shintoku	20716177
TOT_040000076	mRNA	TOT_040000076	NC_025263.1	177185	177787	D	TOT_040000076	<177185..>177787	Theileria orientalis strain Shintoku	20716178
TOT_040000077	mRNA	TOT_040000077	NC_025263.1	177921	179985	R	TOT_040000077	complement(join(<177921..178202,178232..178533,178567..178653,178748..178787,178818..179369,179399..179515,179547..179845,179880..>179985))	Theileria orientalis strain Shintoku	20716179
TOT_040000078	mRNA	TOT_040000078	NC_025263.1	180096	181378	R	TOT_040000078	complement(join(<180096..180179,180211..180283,180319..180387,180420..180554,180585..180677,180709..180803,180837..180926,180958..181035,181068..181192,181225..>181378))	Theileria orientalis strain Shintoku	20716180
TOT_040000079	mRNA	TOT_040000079	NC_025263.1	181918	182607	D	TOT_040000079	<181918..>182607	Theileria orientalis strain Shintoku	20716181
TOT_040000080	mRNA	TOT_040000080	NC_025263.1	182651	182971	R	TOT_040000080	complement(<182651..>182971)	Theileria orientalis strain Shintoku	20716182
TOT_040000081	mRNA	TOT_040000081	NC_025263.1	183078	183761	R	TOT_040000081	complement(<183078..>183761)	Theileria orientalis strain Shintoku	20716183
TOT_040000082	mRNA	TOT_040000082	NC_025263.1	184039	187612	D	TOT_040000082	join(<184039..184180,184262..184470,184505..184729,184760..185165,185206..185291,185325..185464,185495..185823,185852..185984,186021..186196,186375..>187612)	Theileria orientalis strain Shintoku	20716184
TOT_040000083	mRNA	TOT_040000083	NC_025263.1	187772	189875	R	TOT_040000083	complement(join(<187772..188355,188473..188562,188596..188720,188755..188877,188943..189082,189113..189327,189359..189498,189532..>189875))	Theileria orientalis strain Shintoku	20716185
TOT_040000084	mRNA	TOT_040000084	NC_025263.1	189962	191247	D	TOT_040000084	join(<189962..190160,190197..190286,190321..190496,190531..190671,190727..190789,190826..190936,190975..>191247)	Theileria orientalis strain Shintoku	20716186
TOT_040000085	mRNA	TOT_040000085	NC_025263.1	191404	192557	R	TOT_040000085	complement(join(<191404..191504,191536..191731,191762..191866,191899..191923,191955..191998,192031..192383,192395..>192557))	Theileria orientalis strain Shintoku	20716187
TOT_040000086	mRNA	TOT_040000086	NC_025263.1	193592	194731	D	TOT_040000086	join(<193592..193914,194242..>194731)	Theileria orientalis strain Shintoku	20716188
TOT_040000087	mRNA	TOT_040000087	NC_025263.1	195148	196948	R	TOT_040000087	complement(join(<195148..195293,195603..195726,195767..195881,196006..196126,196158..196302,196332..196543,196573..>196948))	Theileria orientalis strain Shintoku	20716189
TOT_040000088	mRNA	TOT_040000088	NC_025263.1	197328	198716	D	TOT_040000088	join(<197328..197582,197614..197901,197933..198367,198386..198517,198558..>198716)	Theileria orientalis strain Shintoku	20716190
TOT_040000915	mRNA	TOT_040000915	NC_025263.1	198932	199798	R	TOT_040000915	complement(<198932..>199798)	Theileria orientalis strain Shintoku	20716935
TOT_040000090	mRNA	TOT_040000090	NC_025263.1	200025	201881	R	TOT_040000090	complement(join(<200025..200463,200535..200675,200718..200800,200841..>201881))	Theileria orientalis strain Shintoku	20716191
TOT_040000916	mRNA	TOT_040000916	NC_025263.1	202643	203276	D	TOT_040000916	join(<202643..203061,203117..>203276)	Theileria orientalis strain Shintoku	20716936
TOT_040000917	mRNA	TOT_040000917	NC_025263.1	203344	203505	D	TOT_040000917	<203344..>203505	Theileria orientalis strain Shintoku	20716937
TOT_040000093	mRNA	TOT_040000093	NC_025263.1	203579	204680	R	TOT_040000093	complement(join(<203579..203648,203683..203981,204013..204386,204422..>204680))	Theileria orientalis strain Shintoku	20716192
TOT_040000094	mRNA	TOT_040000094	NC_025263.1	207341	208755	R	TOT_040000094	complement(join(<207341..208101,208134..>208755))	Theileria orientalis strain Shintoku	20716193
TOT_040000095	mRNA	TOT_040000095	NC_025263.1	209355	209738	D	TOT_040000095	join(<209355..209430,209470..>209738)	Theileria orientalis strain Shintoku	20716194
TOT_040000096	mRNA	TOT_040000096	NC_025263.1	210096	212068	R	TOT_040000096	complement(join(<210096..211619,211997..>212068))	Theileria orientalis strain Shintoku	20716195
TOT_040000097	mRNA	TOT_040000097	NC_025263.1	212743	214040	R	TOT_040000097	complement(join(<212743..213020,213053..213207,213239..213626,213695..>214040))	Theileria orientalis strain Shintoku	20716196
TOT_040000098	mRNA	TOT_040000098	NC_025263.1	214183	214917	R	TOT_040000098	complement(<214183..>214917)	Theileria orientalis strain Shintoku	20716197
TOT_040000099	mRNA	TOT_040000099	NC_025263.1	215153	215895	D	TOT_040000099	join(<215153..215256,215389..215673,215708..215811,215846..>215895)	Theileria orientalis strain Shintoku	20716198
TOT_040000100	mRNA	TOT_040000100	NC_025263.1	216068	218626	D	TOT_040000100	join(<216068..216204,216291..216474,216506..>218626)	Theileria orientalis strain Shintoku	20716199
TOT_040000101	mRNA	TOT_040000101	NC_025263.1	218704	219129	D	TOT_040000101	<218704..>219129	Theileria orientalis strain Shintoku	20716200
TOT_040000102	mRNA	TOT_040000102	NC_025263.1	219142	220339	R	TOT_040000102	complement(join(<219142..219195,219225..219278,219329..219427,219465..219646,219674..219760,219797..219842,219883..219988,220071..>220339))	Theileria orientalis strain Shintoku	20716201
TOT_040000103	mRNA	TOT_040000103	NC_025263.1	220442	221284	R	TOT_040000103	complement(join(<220442..220657,220688..220837,220875..220964,220995..221082,221115..>221284))	Theileria orientalis strain Shintoku	20716202
TOT_040000104	mRNA	TOT_040000104	NC_025263.1	221491	223308	D	TOT_040000104	join(<221491..221847,221878..222051,222131..222350,222533..222645,222663..222923,222995..223083,223149..>223308)	Theileria orientalis strain Shintoku	20716203
TOT_040000105	mRNA	TOT_040000105	NC_025263.1	223400	226207	D	TOT_040000105	join(<223400..225187,225251..>226207)	Theileria orientalis strain Shintoku	20716204
TOT_040000106	mRNA	TOT_040000106	NC_025263.1	226855	227625	D	TOT_040000106	join(<226855..227000,227033..227211,227279..>227625)	Theileria orientalis strain Shintoku	20716205
TOT_040000918	mRNA	TOT_040000918	NC_025263.1	227830	229143	R	TOT_040000918	complement(join(<227830..227896,227926..227983,228021..228156,228188..228304,228341..228379,228484..228614,228651..228844,228887..>229143))	Theileria orientalis strain Shintoku	20716938
TOT_040000108	mRNA	TOT_040000108	NC_025263.1	229302	231557	R	TOT_040000108	complement(join(<229302..231247,231293..>231557))	Theileria orientalis strain Shintoku	20716206
TOT_040000109	mRNA	TOT_040000109	NC_025263.1	231835	233627	D	TOT_040000109	join(<231835..232087,232153..232634,232665..232925,232960..233013,233139..233423,233454..>233627)	Theileria orientalis strain Shintoku	20716207
TOT_040000110	mRNA	TOT_040000110	NC_025263.1	233841	235564	R	TOT_040000110	complement(join(<233841..234077,234277..234529,234568..234670,234702..234892,234998..235089,235121..235230,235260..235457,235489..>235564))	Theileria orientalis strain Shintoku	20716208
TOT_040000111	mRNA	TOT_040000111	NC_025263.1	235763	236269	D	TOT_040000111	<235763..>236269	Theileria orientalis strain Shintoku	20716209
TOT_040000112	mRNA	TOT_040000112	NC_025263.1	236275	237362	R	TOT_040000112	complement(join(<236275..236412,236534..236672,236715..236777,236807..236858,236889..236917,236951..236968,237003..237042,237085..237145,237177..237230,237261..>237362))	Theileria orientalis strain Shintoku	20716210
TOT_040000113	mRNA	TOT_040000113	NC_025263.1	237399	237968	R	TOT_040000113	complement(join(<237399..237515,237541..237612,237888..>237968))	Theileria orientalis strain Shintoku	20716211
TOT_040000919	mRNA	TOT_040000919	NC_025263.1	237630	238307	D	TOT_040000919	join(<237630..237728,237821..237883,237915..237954,237984..238083,238154..238193,238225..238258,238294..>238307)	Theileria orientalis strain Shintoku	20716939
TOT_040000115	mRNA	TOT_040000115	NC_025263.1	238506	246103	R	TOT_040000115	complement(join(<238506..238574,238668..238779,238812..238928,238971..239044,239075..239477,239509..239657,239694..239897,239927..240088,240123..240428,240462..240642,240674..240765,240804..241013,241044..241197,241321..241468,241503..241866,241934..244010,244074..>246103))	Theileria orientalis strain Shintoku	20716212
TOT_040000116	mRNA	TOT_040000116	NC_025263.1	246496	247301	R	TOT_040000116	complement(join(<246496..246829,246942..247087,247118..247204,247239..>247301))	Theileria orientalis strain Shintoku	20716213
TOT_040000118	mRNA	TOT_040000118	NC_025263.1	247325	250331	R	TOT_040000118	complement(join(<247325..247396,247569..>250331))	Theileria orientalis strain Shintoku	20716214
TOT_040000119	mRNA	TOT_040000119	NC_025263.1	250779	252424	D	TOT_040000119	join(<250779..250892,250935..251020,251052..251188,251220..251340,251370..251486,251518..251611,251645..251691,251723..251786,251819..251935,251976..252260,252302..>252424)	Theileria orientalis strain Shintoku	20716215
TOT_040000120	mRNA	TOT_040000120	NC_025263.1	252669	255011	D	TOT_040000120	join(<252669..252783,252861..252920,252984..253272,253321..253699,253730..253903,253946..254008,254040..254327,254370..254457,254490..254600,254773..>255011)	Theileria orientalis strain Shintoku	20716216
TOT_040000121	mRNA	TOT_040000121	NC_025263.1	254799	256585	R	TOT_040000121	complement(join(<254799..255012,255017..256357,256398..>256585))	Theileria orientalis strain Shintoku	20716217
TOT_040000122	mRNA	TOT_040000122	NC_025263.1	256732	259126	D	TOT_040000122	join(<256732..256891,256935..257191,257251..258300,258342..258440,258479..258857,258913..259004,259049..>259126)	Theileria orientalis strain Shintoku	20716218
TOT_040000123	mRNA	TOT_040000123	NC_025263.1	259251	260309	D	TOT_040000123	join(<259251..259545,259684..>260309)	Theileria orientalis strain Shintoku	20716219
TOT_040000124	mRNA	TOT_040000124	NC_025263.1	260674	276182	R	TOT_040000124	complement(join(<260674..260811,260924..261286,261316..261442,261756..262137,262216..265825,266002..266566,266618..267074,267156..267540,267712..269406,269612..271456,271674..273611,273801..275278,275348..275678,275829..>276182))	Theileria orientalis strain Shintoku	20716220
TOT_040000125	mRNA	TOT_040000125	NC_025263.1	277429	278993	D	TOT_040000125	join(<277429..277863,277896..277928,277959..278038,278071..278138,278168..278397,278431..278510,278547..278652,278683..278892,278925..>278993)	Theileria orientalis strain Shintoku	20716221
TOT_040000920	mRNA	TOT_040000920	NC_025263.1	279148	279405	D	TOT_040000920	<279148..>279405	Theileria orientalis strain Shintoku	20716940
TOT_040000921	mRNA	TOT_040000921	NC_025263.1	280239	281783	D	TOT_040000921	join(<280239..280524,280627..>281783)	Theileria orientalis strain Shintoku	20716941
TOT_040000128	mRNA	TOT_040000128	NC_025263.1	282006	285056	D	TOT_040000128	join(<282006..282420,282452..282957,282993..283191,283223..283344,283408..283608,283737..283879,283921..284796,284831..>285056)	Theileria orientalis strain Shintoku	20716222
TOT_040000129	mRNA	TOT_040000129	NC_025263.1	285159	285856	D	TOT_040000129	join(<285159..285417,285459..>285856)	Theileria orientalis strain Shintoku	20716223
TOT_040000130	mRNA	TOT_040000130	NC_025263.1	285955	286854	R	TOT_040000130	complement(join(<285955..286166,286199..286506,286538..>286854))	Theileria orientalis strain Shintoku	20716224
TOT_040000131	mRNA	TOT_040000131	NC_025263.1	287668	288676	D	TOT_040000131	join(<287668..287985,288021..288159,288196..288347,288396..288449,288479..>288676)	Theileria orientalis strain Shintoku	20716225
TOT_040000132	mRNA	TOT_040000132	NC_025263.1	288744	289102	D	TOT_040000132	join(<288744..288880,288923..288972,289020..>289102)	Theileria orientalis strain Shintoku	20716226
TOT_040000133	mRNA	TOT_040000133	NC_025263.1	289308	293914	D	TOT_040000133	join(<289308..289456,289488..289571,289638..289721,289753..290343,290375..290523,290555..290617,290650..290790,290825..290891,290926..291088,291120..291434,291466..291565,291597..291861,291895..291946,291977..292136,292168..292242,292393..292500,292532..292675,292707..292816,292881..293391,293422..293508,293540..293641,293675..293730,293768..>293914)	Theileria orientalis strain Shintoku	20716227
TOT_040000134	mRNA	TOT_040000134	NC_025263.1	294042	295129	D	TOT_040000134	join(<294042..294048,294198..294397,294427..294550,294585..294694,294823..295046,295114..>295129)	Theileria orientalis strain Shintoku	20716228
TOT_040000135	mRNA	TOT_040000135	NC_025263.1	295278	296245	R	TOT_040000135	complement(join(<295278..295513,295546..295662,295755..296033,296065..>296245))	Theileria orientalis strain Shintoku	20716229
TOT_040000136	mRNA	TOT_040000136	NC_025263.1	296746	299105	D	TOT_040000136	join(<296746..296938,296974..297051,297089..297209,297241..297315,297346..297493,297524..297610,297641..297770,297868..298009,298040..298370,298645..298794,298835..298921,298961..299024,299062..>299105)	Theileria orientalis strain Shintoku	20716230
TOT_040000137	mRNA	TOT_040000137	NC_025263.1	299237	299407	R	TOT_040000137	complement(<299237..>299407)	Theileria orientalis strain Shintoku	20716231
TOT_040000138	mRNA	TOT_040000138	NC_025263.1	299534	301725	D	TOT_040000138	join(<299534..300016,300049..300097,300132..300433,300473..300691,300807..300973,301005..301496,301701..>301725)	Theileria orientalis strain Shintoku	20716232
TOT_040000139	mRNA	TOT_040000139	NC_025263.1	302529	303734	D	TOT_040000139	<302529..>303734	Theileria orientalis strain Shintoku	20716233
TOT_040000140	mRNA	TOT_040000140	NC_025263.1	304009	304770	D	TOT_040000140	join(<304009..304075,304116..304204,304239..304313,304370..304506,304536..304611,304702..>304770)	Theileria orientalis strain Shintoku	20716234
TOT_040000141	mRNA	TOT_040000141	NC_025263.1	305269	307049	R	TOT_040000141	complement(join(<305269..305415,305449..305551,305590..305633,305667..305790,305825..305877,305926..306167,306198..306303,306336..306498,306525..306597,306628..306816,306846..306921,306954..>307049))	Theileria orientalis strain Shintoku	20716235
TOT_040000142	mRNA	TOT_040000142	NC_025263.1	307623	310029	D	TOT_040000142	join(<307623..307748,307784..308159,308191..308254,308285..308549,308712..308831,308863..309348,309379..309468,309500..309901,309934..>310029)	Theileria orientalis strain Shintoku	20716236
TOT_040000143	mRNA	TOT_040000143	NC_025263.1	310742	311958	D	TOT_040000143	join(<310742..311024,311060..311853,311890..>311958)	Theileria orientalis strain Shintoku	20716237
TOT_040000144	mRNA	TOT_040000144	NC_025263.1	312100	314974	R	TOT_040000144	complement(join(<312100..312199,312210..>314974))	Theileria orientalis strain Shintoku	20716238
TOT_040000145	mRNA	TOT_040000145	NC_025263.1	315474	320336	D	TOT_040000145	join(<315474..315797,315939..>320336)	Theileria orientalis strain Shintoku	20716239
TOT_040000146	mRNA	TOT_040000146	NC_025263.1	320648	321797	D	TOT_040000146	join(<320648..320650,320725..320841,320874..320970,321002..321067,321098..321227,321258..321336,321366..321522,321553..>321797)	Theileria orientalis strain Shintoku	20716240
TOT_040000147	mRNA	TOT_040000147	NC_025263.1	321960	322608	D	TOT_040000147	join(<321960..322109,322203..322356,322460..>322608)	Theileria orientalis strain Shintoku	20716241
TOT_040000148	mRNA	TOT_040000148	NC_025263.1	323029	324369	R	TOT_040000148	complement(join(<323029..323205,323235..323481,323512..323623,323664..323811,323841..323950,324045..324146,324207..>324369))	Theileria orientalis strain Shintoku	20716242
TOT_040000149	mRNA	TOT_040000149	NC_025263.1	324579	325968	R	TOT_040000149	complement(join(<324579..324978,325008..325202,325245..325701,325731..>325968))	Theileria orientalis strain Shintoku	20716243
TOT_040000150	mRNA	TOT_040000150	NC_025263.1	326377	326943	D	TOT_040000150	<326377..>326943	Theileria orientalis strain Shintoku	20716244
TOT_040000151	mRNA	TOT_040000151	NC_025263.1	326985	330675	R	TOT_040000151	complement(join(<326985..327074,327108..327178,327346..327386,327417..327466,327496..327615,327681..327749,327887..327935,327973..328054,328086..328915,329032..329191,329202..329802,329837..329872,329911..330010,330044..330258,330289..>330675))	Theileria orientalis strain Shintoku	20716245
TOT_040000152	mRNA	TOT_040000152	NC_025263.1	330937	332235	D	TOT_040000152	join(<330937..331119,331216..331330,331365..331523,331556..331641,331672..331832,331868..332001,332033..>332235)	Theileria orientalis strain Shintoku	20716246
TOT_040000153	mRNA	TOT_040000153	NC_025263.1	332764	334910	R	TOT_040000153	complement(join(<332764..333243,333597..333836,333897..>334910))	Theileria orientalis strain Shintoku	20716247
TOT_040000154	mRNA	TOT_040000154	NC_025263.1	335441	337634	R	TOT_040000154	complement(join(<335441..335610,335642..335934,335967..336080,336192..336301,336334..336570,336593..336703,336740..336847,336880..337011,337049..337125,337156..337255,337294..337479,337569..>337634))	Theileria orientalis strain Shintoku	20716248
TOT_040000155	mRNA	TOT_040000155	NC_025263.1	337947	340634	R	TOT_040000155	complement(<337947..>340634)	Theileria orientalis strain Shintoku	20716249
TOT_040000156	mRNA	TOT_040000156	NC_025263.1	341538	343200	D	TOT_040000156	join(<341538..341568,341677..341768,341801..341888,341923..341994,342026..342299,342332..342638,342670..343017,343051..>343200)	Theileria orientalis strain Shintoku	20716250
TOT_040000157	mRNA	TOT_040000157	NC_025263.1	344582	345076	D	TOT_040000157	join(<344582..344597,344679..>345076)	Theileria orientalis strain Shintoku	20716251
TOT_040000158	mRNA	TOT_040000158	NC_025263.1	345112	345773	R	TOT_040000158	complement(join(<345112..345293,345326..345427,345460..345489,345525..345591,345627..345681,345721..>345773))	Theileria orientalis strain Shintoku	20716252
TOT_040000159	mRNA	TOT_040000159	NC_025263.1	345952	347586	D	TOT_040000159	join(<345952..346078,346184..346396,346473..346592,346660..346749,346835..346905,346937..347108,347148..347195,347441..>347586)	Theileria orientalis strain Shintoku	20716253
TOT_040000160	mRNA	TOT_040000160	NC_025263.1	347696	348789	R	TOT_040000160	complement(join(<347696..347971,348010..348107,348142..348201,348233..348473,348503..348673,348706..>348789))	Theileria orientalis strain Shintoku	20716254
TOT_040000161	mRNA	TOT_040000161	NC_025263.1	349152	350926	D	TOT_040000161	join(<349152..349264,349324..349552,349586..349783,349814..349868,349906..349931,349962..350444,350477..>350926)	Theileria orientalis strain Shintoku	20716255
TOT_040000162	mRNA	TOT_040000162	NC_025263.1	351224	352793	D	TOT_040000162	join(<351224..351623,351664..351827,351858..352008,352130..352570,352699..>352793)	Theileria orientalis strain Shintoku	20716256
TOT_040000163	mRNA	TOT_040000163	NC_025263.1	353324	354756	D	TOT_040000163	join(<353324..353368,353549..353658,353951..354101,354161..354235,354265..354318,354364..354439,354471..354582,354726..>354756)	Theileria orientalis strain Shintoku	20716257
TOT_040000164	mRNA	TOT_040000164	NC_025263.1	354938	355847	R	TOT_040000164	complement(join(<354938..355125,355218..355457,355487..>355847))	Theileria orientalis strain Shintoku	20716258
TOT_040000165	mRNA	TOT_040000165	NC_025263.1	356244	357017	D	TOT_040000165	join(<356244..356309,356342..356450,356480..356676,356709..356809,356849..356918,356979..>357017)	Theileria orientalis strain Shintoku	20716259
TOT_040000166	mRNA	TOT_040000166	NC_025263.1	357298	359064	D	TOT_040000166	<357298..>359064	Theileria orientalis strain Shintoku	20716260
TOT_040000167	mRNA	TOT_040000167	NC_025263.1	359221	360364	D	TOT_040000167	join(<359221..359268,359387..359481,359571..359653,359692..359858,359889..360078,360113..360289,360315..>360364)	Theileria orientalis strain Shintoku	20716261
TOT_040000168	mRNA	TOT_040000168	NC_025263.1	360410	360595	R	TOT_040000168	complement(<360410..>360595)	Theileria orientalis strain Shintoku	20716262
TOT_040000169	mRNA	TOT_040000169	NC_025263.1	360601	361232	D	TOT_040000169	join(<360601..360706,360739..>361232)	Theileria orientalis strain Shintoku	20716263
TOT_040000170	mRNA	TOT_040000170	NC_025263.1	361372	363150	D	TOT_040000170	join(<361372..361492,361536..361735,361764..361883,361915..362037,362069..362225,362282..362359,362390..362571,362606..362722,362753..362794,362856..362943,362975..>363150)	Theileria orientalis strain Shintoku	20716264
TOT_040000922	mRNA	TOT_040000922	NC_025263.1	363696	365588	R	TOT_040000922	complement(join(<363696..363827,363860..363979,364033..364099,364238..364336,364367..364710,364741..364944,364977..365044,365077..365153,365336..365432,365504..>365588))	Theileria orientalis strain Shintoku	20716942
TOT_040000172	mRNA	TOT_040000172	NC_025263.1	365657	366798	R	TOT_040000172	complement(join(<365657..366085,366148..366342,366371..366551,366582..366700,366733..>366798))	Theileria orientalis strain Shintoku	20716265
TOT_040000173	mRNA	TOT_040000173	NC_025263.1	366965	371485	R	TOT_040000173	complement(join(<366965..367226,367263..>371485))	Theileria orientalis strain Shintoku	20716266
TOT_040000174	mRNA	TOT_040000174	NC_025263.1	371647	374861	R	TOT_040000174	complement(join(<371647..371777,371992..373361,373401..374769,374804..>374861))	Theileria orientalis strain Shintoku	20716267
TOT_040000175	mRNA	TOT_040000175	NC_025263.1	375234	376001	D	TOT_040000175	join(<375234..375552,375583..375729,375759..375844,375876..>376001)	Theileria orientalis strain Shintoku	20716268
TOT_040000176	mRNA	TOT_040000176	NC_025263.1	376416	376784	R	TOT_040000176	complement(<376416..>376784)	Theileria orientalis strain Shintoku	20716269
TOT_040000177	mRNA	TOT_040000177	NC_025263.1	376842	379988	R	TOT_040000177	complement(join(<376842..376957,376992..377131,377174..377290,377326..378277,378346..378449,378811..379351,379384..379515,379545..379875,379914..>379988))	Theileria orientalis strain Shintoku	20716270
TOT_040000178	mRNA	TOT_040000178	NC_025263.1	380622	381116	D	TOT_040000178	<380622..>381116	Theileria orientalis strain Shintoku	20716271
TOT_040000896	mRNA	TOT_040000896	NC_025263.1	381321	384414	R	TOT_040000896	complement(join(<381321..381689,381822..381941,382063..382166,382198..382252,382295..382392,382486..382609,382645..382846,382950..383060,383103..383154,383194..383242,383273..383350,383415..383824,383858..383929,383962..384094,384160..384318,384355..>384414))	Theileria orientalis strain Shintoku	20716923
TOT_040000179	mRNA	TOT_040000179	NC_025263.1	384584	385205	R	TOT_040000179	complement(join(<384584..385095,385142..>385205))	Theileria orientalis strain Shintoku	20716272
TOT_040000180	mRNA	TOT_040000180	NC_025263.1	385614	385962	D	TOT_040000180	join(<385614..385647,385664..>385962)	Theileria orientalis strain Shintoku	20716273
TOT_040000181	mRNA	TOT_040000181	NC_025263.1	386493	387357	D	TOT_040000181	join(<386493..386558,386590..>387357)	Theileria orientalis strain Shintoku	20716274
TOT_040000182	mRNA	TOT_040000182	NC_025263.1	387708	389645	D	TOT_040000182	<387708..>389645	Theileria orientalis strain Shintoku	20716275
TOT_040000183	mRNA	TOT_040000183	NC_025263.1	389998	391291	D	TOT_040000183	join(<389998..390295,390325..390567,390597..390825,390855..391014,391088..>391291)	Theileria orientalis strain Shintoku	20716276
TOT_040000184	mRNA	TOT_040000184	NC_025263.1	391421	394699	R	TOT_040000184	complement(join(<391421..392047,392142..392824,393078..393124,393167..393309,393342..393451,393505..393681,393715..393786,393816..393924,393956..394108,394139..394336,394421..>394699))	Theileria orientalis strain Shintoku	20716277
TOT_040000185	mRNA	TOT_040000185	NC_025263.1	394926	396567	D	TOT_040000185	join(<394926..395125,395164..395214,395246..395287,395318..395366,395397..395532,395564..395773,395883..395926,396181..>396567)	Theileria orientalis strain Shintoku	20716278
TOT_040000186	mRNA	TOT_040000186	NC_025263.1	396835	400333	R	TOT_040000186	complement(join(<396835..396850,396861..397112,397206..398410,398500..398715,398841..399347,399383..>400333))	Theileria orientalis strain Shintoku	20716279
TOT_040000187	mRNA	TOT_040000187	NC_025263.1	400854	404265	D	TOT_040000187	join(<400854..400875,400909..401353,401383..401600,401631..403087,403280..403792,403911..404066,404098..>404265)	Theileria orientalis strain Shintoku	20716280
TOT_040000188	mRNA	TOT_040000188	NC_025263.1	404678	407545	R	TOT_040000188	complement(<404678..>407545)	Theileria orientalis strain Shintoku	20716281
TOT_040000923	mRNA	TOT_040000923	NC_025263.1	408015	410424	D	TOT_040000923	join(<408015..408223,408243..408367,408401..408657,408689..408789,408819..408890,408921..409110,409142..409231,409263..409343,409376..409446,409555..409708,409858..410268,410302..>410424)	Theileria orientalis strain Shintoku	20716943
TOT_040000924	mRNA	TOT_040000924	NC_025263.1	410513	410996	D	TOT_040000924	join(<410513..410638,410712..410813,410865..>410996)	Theileria orientalis strain Shintoku	20716944
TOT_040000925	mRNA	TOT_040000925	NC_025263.1	411089	411377	R	TOT_040000925	complement(join(<411089..411223,411264..>411377))	Theileria orientalis strain Shintoku	20716945
TOT_040000192	mRNA	TOT_040000192	NC_025263.1	411639	414992	R	TOT_040000192	complement(join(<411639..412346,412647..412717,412907..>414992))	Theileria orientalis strain Shintoku	20716282
TOT_040000193	mRNA	TOT_040000193	NC_025263.1	415296	416684	D	TOT_040000193	join(<415296..415354,415397..415493,415527..415970,416005..416115,416152..416280,416312..416563,416598..>416684)	Theileria orientalis strain Shintoku	20716283
TOT_040000194	mRNA	TOT_040000194	NC_025263.1	416821	417911	D	TOT_040000194	join(<416821..417083,417131..>417911)	Theileria orientalis strain Shintoku	20716284
TOT_040000195	mRNA	TOT_040000195	NC_025263.1	418022	419399	D	TOT_040000195	join(<418022..418245,418282..419114,419146..>419399)	Theileria orientalis strain Shintoku	20716285
TOT_040000196	mRNA	TOT_040000196	NC_025263.1	419700	422507	R	TOT_040000196	complement(join(<419700..420171,420223..>422507))	Theileria orientalis strain Shintoku	20716286
TOT_040000197	mRNA	TOT_040000197	NC_025263.1	422981	424224	R	TOT_040000197	complement(join(<422981..423150,423201..423270,423300..423335,423375..423620,423655..>424224))	Theileria orientalis strain Shintoku	20716287
TOT_040000198	mRNA	TOT_040000198	NC_025263.1	424481	425850	D	TOT_040000198	join(<424481..424561,424619..424903,424935..425085,425117..425232,425269..425347,425478..425697,425748..>425850)	Theileria orientalis strain Shintoku	20716288
TOT_040000199	mRNA	TOT_040000199	NC_025263.1	425836	428678	R	TOT_040000199	complement(join(<425836..425865,426049..426336,426469..428519,428555..>428678))	Theileria orientalis strain Shintoku	20716289
TOT_040000200	mRNA	TOT_040000200	NC_025263.1	428883	430175	D	TOT_040000200	join(<428883..429210,429349..429804,429835..>430175)	Theileria orientalis strain Shintoku	20716290
TOT_040000897	mRNA	TOT_040000897	NC_025263.1	430521	431912	D	TOT_040000897	<430521..>431912	Theileria orientalis strain Shintoku	20716924
TOT_040000201	mRNA	TOT_040000201	NC_025263.1	432058	432433	R	TOT_040000201	complement(join(<432058..432105,432135..432212,432296..>432433))	Theileria orientalis strain Shintoku	20716291
TOT_040000202	mRNA	TOT_040000202	NC_025263.1	432724	433962	R	TOT_040000202	complement(join(<432724..432778,432810..432958,432998..433063,433102..>433962))	Theileria orientalis strain Shintoku	20716292
TOT_040000203	mRNA	TOT_040000203	NC_025263.1	434384	435238	D	TOT_040000203	join(<434384..434553,434587..434725,434757..434865,434896..435031,435097..>435238)	Theileria orientalis strain Shintoku	20716293
TOT_040000204	mRNA	TOT_040000204	NC_025263.1	435548	436476	R	TOT_040000204	complement(join(<435548..435716,435749..>436476))	Theileria orientalis strain Shintoku	20716294
TOT_040000205	mRNA	TOT_040000205	NC_025263.1	436878	438577	D	TOT_040000205	join(<436878..437265,437332..437431,437461..437523,437555..437905,437937..438041,438076..438167,438213..438394,438494..>438577)	Theileria orientalis strain Shintoku	20716295
TOT_040000206	mRNA	TOT_040000206	NC_025263.1	438725	440206	R	TOT_040000206	complement(join(<438725..438764,438969..>440206))	Theileria orientalis strain Shintoku	20716296
TOT_040000207	mRNA	TOT_040000207	NC_025263.1	440397	441236	D	TOT_040000207	join(<440397..440640,440672..440854,440995..>441236)	Theileria orientalis strain Shintoku	20716297
TOT_040000208	mRNA	TOT_040000208	NC_025263.1	441408	444409	R	TOT_040000208	complement(join(<441408..441473,441538..441692,441807..441902,442053..443126,443373..444099,444131..>444409))	Theileria orientalis strain Shintoku	20716298
TOT_040000209	mRNA	TOT_040000209	NC_025263.1	444666	445362	D	TOT_040000209	join(<444666..444746,444776..444919,444961..>445362)	Theileria orientalis strain Shintoku	20716299
TOT_040000210	mRNA	TOT_040000210	NC_025263.1	445505	447897	R	TOT_040000210	complement(join(<445505..445689,445809..446309,446456..446840,446955..447065,447096..447273,447305..447561,447684..447784,447840..>447897))	Theileria orientalis strain Shintoku	20716300
TOT_040000211	mRNA	TOT_040000211	NC_025263.1	448668	450018	D	TOT_040000211	join(<448668..449532,449699..>450018)	Theileria orientalis strain Shintoku	20716301
TOT_040000212	mRNA	TOT_040000212	NC_025263.1	450101	450575	R	TOT_040000212	complement(join(<450101..450266,450305..450440,450548..>450575))	Theileria orientalis strain Shintoku	20716302
TOT_040000213	mRNA	TOT_040000213	NC_025263.1	450853	451203	R	TOT_040000213	complement(<450853..>451203)	Theileria orientalis strain Shintoku	20716303
TOT_040000926	mRNA	TOT_040000926	NC_025263.1	451786	453696	R	TOT_040000926	complement(join(<451786..451875,451911..452132,452165..452283,452319..452410,452447..452583,452617..452687,452721..452808,452843..452900,452933..>453696))	Theileria orientalis strain Shintoku	20716946
TOT_040000927	mRNA	TOT_040000927	NC_025263.1	454505	457810	R	TOT_040000927	complement(<454505..>457810)	Theileria orientalis strain Shintoku	20716947
TOT_040000216	mRNA	TOT_040000216	NC_025263.1	457931	462424	R	TOT_040000216	complement(join(<457931..458129,458161..458277,458308..458504,458534..458932,459080..459275,459307..459500,459533..460116,460206..460495,460527..460619,460663..460815,460851..461369,461403..461640,461670..461830,461863..462112,462145..>462424))	Theileria orientalis strain Shintoku	20716304
TOT_040000217	mRNA	TOT_040000217	NC_025263.1	462601	463440	R	TOT_040000217	complement(join(<462601..462743,462776..463046,463090..>463440))	Theileria orientalis strain Shintoku	20716305
TOT_040000218	mRNA	TOT_040000218	NC_025263.1	463477	469647	R	TOT_040000218	complement(join(<463477..463698,463854..464174,464520..464737,464975..466207,466265..466979,467073..468413,468462..469123,469189..469489,469522..>469647))	Theileria orientalis strain Shintoku	20716306
TOT_040000219	mRNA	TOT_040000219	NC_025263.1	469743	470788	R	TOT_040000219	complement(join(<469743..469777,469957..>470788))	Theileria orientalis strain Shintoku	20716307
TOT_040000220	mRNA	TOT_040000220	NC_025263.1	471018	472383	R	TOT_040000220	complement(join(<471018..472306,472344..>472383))	Theileria orientalis strain Shintoku	20716308
TOT_040000221	mRNA	TOT_040000221	NC_025263.1	472704	473896	D	TOT_040000221	join(<472704..472736,472768..472921,472953..473024,473055..473125,473157..473299,473330..473426,473458..473685,473738..>473896)	Theileria orientalis strain Shintoku	20716309
TOT_040000222	mRNA	TOT_040000222	NC_025263.1	473963	476178	D	TOT_040000222	join(<473963..474161,474201..474581,474613..474978,475016..475210,475292..475344,475383..475595,475652..475742,475856..476016,476047..>476178)	Theileria orientalis strain Shintoku	20716310
TOT_040000928	mRNA	TOT_040000928	NC_025263.1	476329	478662	R	TOT_040000928	complement(join(<476329..476447,476618..476714,476756..476890,477018..477166,477309..477397,477575..>478662))	Theileria orientalis strain Shintoku	20716948
TOT_040000224	mRNA	TOT_040000224	NC_025263.1	479045	480181	D	TOT_040000224	join(<479045..479607,479637..479860,479891..480066,480098..>480181)	Theileria orientalis strain Shintoku	20716311
TOT_040000225	mRNA	TOT_040000225	NC_025263.1	480329	482320	D	TOT_040000225	join(<480329..480413,480721..481862,481910..>482320)	Theileria orientalis strain Shintoku	20716312
TOT_040000226	mRNA	TOT_040000226	NC_025263.1	482435	483151	R	TOT_040000226	complement(join(<482435..482854,482885..>483151))	Theileria orientalis strain Shintoku	20716313
TOT_040000227	mRNA	TOT_040000227	NC_025263.1	483902	488644	D	TOT_040000227	join(<483902..485076,485116..>488644)	Theileria orientalis strain Shintoku	20716314
TOT_040000228	mRNA	TOT_040000228	NC_025263.1	488693	489974	D	TOT_040000228	join(<488693..488793,488824..489878,489952..>489974)	Theileria orientalis strain Shintoku	20716315
TOT_040000229	mRNA	TOT_040000229	NC_025263.1	490007	490317	R	TOT_040000229	complement(join(<490007..490034,490068..490120,490153..>490317))	Theileria orientalis strain Shintoku	20716316
TOT_040000230	mRNA	TOT_040000230	NC_025263.1	490604	491643	R	TOT_040000230	complement(join(<490604..490654,490696..490859,490950..491239,491323..491463,491495..491576,491613..>491643))	Theileria orientalis strain Shintoku	20716317
TOT_040000231	mRNA	TOT_040000231	NC_025263.1	492350	493403	D	TOT_040000231	join(<492350..493277,493360..>493403)	Theileria orientalis strain Shintoku	20716318
TOT_040000232	mRNA	TOT_040000232	NC_025263.1	493592	495630	D	TOT_040000232	join(<493592..494015,494139..494548,494582..494765,494872..494942,494977..495186,495373..495471,495502..>495630)	Theileria orientalis strain Shintoku	20716319
TOT_040000233	mRNA	TOT_040000233	NC_025263.1	495687	497135	D	TOT_040000233	join(<495687..495789,495822..495910,495993..496237,496272..496530,496567..496612,496666..496952,496995..>497135)	Theileria orientalis strain Shintoku	20716320
TOT_040000234	mRNA	TOT_040000234	NC_025263.1	497419	499613	R	TOT_040000234	complement(join(<497419..497539,497570..497815,497864..497943,498073..498123,498188..498463,498519..498574,498609..498706,498791..498942,498947..499064,499095..499189,499220..499257,499412..>499613))	Theileria orientalis strain Shintoku	20716321
TOT_040000235	mRNA	TOT_040000235	NC_025263.1	499966	500274	D	TOT_040000235	<499966..>500274	Theileria orientalis strain Shintoku	20716322
TOT_040000236	mRNA	TOT_040000236	NC_025263.1	500884	503095	D	TOT_040000236	join(<500884..500983,501022..501171,501384..>503095)	Theileria orientalis strain Shintoku	20716323
TOT_040000929	mRNA	TOT_040000929	NC_025263.1	503501	504766	D	TOT_040000929	<503501..>504766	Theileria orientalis strain Shintoku	20716949
TOT_040000930	mRNA	TOT_040000930	NC_025263.1	505043	506112	D	TOT_040000930	join(<505043..505057,505104..505241,505297..505771,505804..505935,505973..>506112)	Theileria orientalis strain Shintoku	20716950
TOT_040000239	mRNA	TOT_040000239	NC_025263.1	506179	507772	D	TOT_040000239	join(<506179..506455,506491..506718,506819..507015,507091..507471,507506..>507772)	Theileria orientalis strain Shintoku	20716324
TOT_040000931	mRNA	TOT_040000931	NC_025263.1	508539	509509	D	TOT_040000931	join(<508539..508581,508612..508739,508931..>509509)	Theileria orientalis strain Shintoku	20716951
TOT_040000241	mRNA	TOT_040000241	NC_025263.1	509775	511816	R	TOT_040000241	complement(join(<509775..510140,510340..510588,510627..510787,510976..511116,511185..511448,511513..>511816))	Theileria orientalis strain Shintoku	20716325
TOT_040000242	mRNA	TOT_040000242	NC_025263.1	512173	515782	D	TOT_040000242	join(<512173..513202,513378..513550,513704..514409,514521..515310,515416..>515782)	Theileria orientalis strain Shintoku	20716326
TOT_040000243	mRNA	TOT_040000243	NC_025263.1	515994	529699	R	TOT_040000243	complement(join(<515994..516981,517045..518515,518742..520926,521191..521491,521570..523678,523801..523892,523979..524698,524967..525297,525504..528049,528243..528528,528591..528719,528794..528962,528992..529120,529152..529538,529582..>529699))	Theileria orientalis strain Shintoku	20716327
TOT_040000244	mRNA	TOT_040000244	NC_025263.1	530107	531672	D	TOT_040000244	<530107..>531672	Theileria orientalis strain Shintoku	20716328
TOT_040000245	mRNA	TOT_040000245	NC_025263.1	531941	532468	R	TOT_040000245	complement(<531941..>532468)	Theileria orientalis strain Shintoku	20716329
TOT_040000932	mRNA	TOT_040000932	NC_025263.1	533171	533579	D	TOT_040000932	join(<533171..533230,533265..533492,533535..>533579)	Theileria orientalis strain Shintoku	20716952
TOT_040000247	mRNA	TOT_040000247	NC_025263.1	534291	536123	R	TOT_040000247	complement(join(<534291..535159,535437..535778,535888..535962,535994..>536123))	Theileria orientalis strain Shintoku	20716330
TOT_040000248	mRNA	TOT_040000248	NC_025263.1	536338	539412	R	TOT_040000248	complement(join(<536338..536402,536671..536850,536940..537018,537279..537395,537435..537533,537765..537860,537936..538131,538180..538367,538635..538905,538937..539120,539160..539273,539316..>539412))	Theileria orientalis strain Shintoku	20716331
TOT_040000249	mRNA	TOT_040000249	NC_025263.1	539598	539947	R	TOT_040000249	complement(join(<539598..539768,539804..>539947))	Theileria orientalis strain Shintoku	20716332
TOT_040000250	mRNA	TOT_040000250	NC_025263.1	540169	541434	D	TOT_040000250	join(<540169..540558,540589..>541434)	Theileria orientalis strain Shintoku	20716333
TOT_040000251	mRNA	TOT_040000251	NC_025263.1	541441	542887	D	TOT_040000251	join(<541441..541607,541648..541737,541796..541862,541897..541948,541980..542028,542219..542273,542780..>542887)	Theileria orientalis strain Shintoku	20716334
TOT_040000252	mRNA	TOT_040000252	NC_025263.1	543231	545568	D	TOT_040000252	join(<543231..543886,543918..544113,544144..544285,544329..544386,544446..544549,544585..544777,544820..544889,545084..545219,545263..545430,545462..>545568)	Theileria orientalis strain Shintoku	20716335
TOT_040000253	mRNA	TOT_040000253	NC_025263.1	545996	547763	D	TOT_040000253	join(<545996..546302,546685..546950,546981..547133,547163..547225,547256..547420,547452..>547763)	Theileria orientalis strain Shintoku	20716336
TOT_040000254	mRNA	TOT_040000254	NC_025263.1	548087	548398	D	TOT_040000254	<548087..>548398	Theileria orientalis strain Shintoku	20716337
TOT_040000255	mRNA	TOT_040000255	NC_025263.1	548584	550122	R	TOT_040000255	complement(<548584..>550122)	Theileria orientalis strain Shintoku	20716338
TOT_040000256	mRNA	TOT_040000256	NC_025263.1	551203	551946	R	TOT_040000256	complement(join(<551203..551342,551382..551426,551485..551632,551668..>551946))	Theileria orientalis strain Shintoku	20716339
TOT_040000257	mRNA	TOT_040000257	NC_025263.1	552671	553556	D	TOT_040000257	join(<552671..552673,552774..>553556)	Theileria orientalis strain Shintoku	20716340
TOT_040000258	mRNA	TOT_040000258	NC_025263.1	553839	554805	R	TOT_040000258	complement(join(<553839..553996,554028..554192,554223..554283,554314..>554805))	Theileria orientalis strain Shintoku	20716341
TOT_040000259	mRNA	TOT_040000259	NC_025263.1	554962	556404	R	TOT_040000259	complement(<554962..>556404)	Theileria orientalis strain Shintoku	20716342
TOT_040000260	mRNA	TOT_040000260	NC_025263.1	557588	557818	R	TOT_040000260	complement(join(<557588..557734,557783..>557818))	Theileria orientalis strain Shintoku	20716343
TOT_040000261	mRNA	TOT_040000261	NC_025263.1	557906	559396	R	TOT_040000261	complement(<557906..>559396)	Theileria orientalis strain Shintoku	20716344
TOT_040000262	mRNA	TOT_040000262	NC_025263.1	560446	563289	R	TOT_040000262	complement(<560446..>563289)	Theileria orientalis strain Shintoku	20716345
TOT_040000263	mRNA	TOT_040000263	NC_025263.1	564491	566041	R	TOT_040000263	complement(<564491..>566041)	Theileria orientalis strain Shintoku	20716346
TOT_040000933	mRNA	TOT_040000933	NC_025263.1	567146	568537	R	TOT_040000933	complement(<567146..>568537)	Theileria orientalis strain Shintoku	20716953
TOT_040000265	mRNA	TOT_040000265	NC_025263.1	569470	571980	D	TOT_040000265	join(<569470..569776,569852..569996,570026..570399,570459..570562,570595..570661,570730..570815,570846..571412,571497..571557,571592..571772,571893..>571980)	Theileria orientalis strain Shintoku	20716347
TOT_040000266	mRNA	TOT_040000266	NC_025263.1	572689	574110	R	TOT_040000266	complement(<572689..>574110)	Theileria orientalis strain Shintoku	20716348
TOT_040000267	mRNA	TOT_040000267	NC_025263.1	574724	576507	R	TOT_040000267	complement(join(<574724..574967,574988..576016,576326..>576507))	Theileria orientalis strain Shintoku	20716349
TOT_040000268	mRNA	TOT_040000268	NC_025263.1	576741	578228	R	TOT_040000268	complement(<576741..>578228)	Theileria orientalis strain Shintoku	20716350
TOT_040000269	mRNA	TOT_040000269	NC_025263.1	578638	580230	R	TOT_040000269	complement(join(<578638..578733,578851..>580230))	Theileria orientalis strain Shintoku	20716351
TOT_040000270	mRNA	TOT_040000270	NC_025263.1	580875	583206	D	TOT_040000270	join(<580875..581172,581202..582072,582186..>583206)	Theileria orientalis strain Shintoku	20716352
TOT_040000271	mRNA	TOT_040000271	NC_025263.1	583456	583728	D	TOT_040000271	<583456..>583728	Theileria orientalis strain Shintoku	20716353
TOT_040000272	mRNA	TOT_040000272	NC_025263.1	583796	585322	R	TOT_040000272	complement(<583796..>585322)	Theileria orientalis strain Shintoku	20716354
TOT_040000273	mRNA	TOT_040000273	NC_025263.1	589154	592138	D	TOT_040000273	<589154..>592138	Theileria orientalis strain Shintoku	20716355
TOT_040000274	mRNA	TOT_040000274	NC_025263.1	592181	594556	D	TOT_040000274	join(<592181..594303,594475..>594556)	Theileria orientalis strain Shintoku	20716356
TOT_040000275	mRNA	TOT_040000275	NC_025263.1	595205	599752	D	TOT_040000275	<595205..>599752	Theileria orientalis strain Shintoku	20716357
TOT_040000276	mRNA	TOT_040000276	NC_025263.1	601402	604185	D	TOT_040000276	<601402..>604185	Theileria orientalis strain Shintoku	20716358
TOT_040000277	mRNA	TOT_040000277	NC_025263.1	604279	604521	R	TOT_040000277	complement(<604279..>604521)	Theileria orientalis strain Shintoku	20716359
TOT_040000934	mRNA	TOT_040000934	NC_025263.1	604618	604984	R	TOT_040000934	complement(join(<604618..604682,604714..>604984))	Theileria orientalis strain Shintoku	20716954
TOT_040000935	mRNA	TOT_040000935	NC_025263.1	605251	606011	R	TOT_040000935	complement(join(<605251..605611,605674..>606011))	Theileria orientalis strain Shintoku	20716955
TOT_040000936	mRNA	TOT_040000936	NC_025263.1	606043	607091	R	TOT_040000936	complement(join(<606043..606282,606345..>607091))	Theileria orientalis strain Shintoku	20716956
TOT_040000281	mRNA	TOT_040000281	NC_025263.1	607121	608255	R	TOT_040000281	complement(join(<607121..607145,607233..607415,607446..607495,607536..607679,607711..607919,607952..>608255))	Theileria orientalis strain Shintoku	20716360
TOT_040000282	mRNA	TOT_040000282	NC_025263.1	608622	610307	D	TOT_040000282	join(<608622..610083,610198..>610307)	Theileria orientalis strain Shintoku	20716361
TOT_040000937	mRNA	TOT_040000937	NC_025263.1	610533	616512	R	TOT_040000937	complement(join(<610533..610865,611010..611339,611456..612567,612729..612954,613137..614851,614950..615133,615165..615248,615361..615483,615521..615699,615808..616053,616113..>616512))	Theileria orientalis strain Shintoku	20716957
TOT_040000284	mRNA	TOT_040000284	NC_025263.1	616721	619298	R	TOT_040000284	complement(join(<616721..617694,617924..>619298))	Theileria orientalis strain Shintoku	20716362
TOT_040000285	mRNA	TOT_040000285	NC_025263.1	619569	623035	R	TOT_040000285	complement(join(<619569..621053,621380..621577,621926..622243,622313..>623035))	Theileria orientalis strain Shintoku	20716363
TOT_040000286	mRNA	TOT_040000286	NC_025263.1	623438	626549	D	TOT_040000286	join(<623438..624204,624301..625613,625648..625731,625764..625888,626053..626112,626352..>626549)	Theileria orientalis strain Shintoku	20716364
TOT_040000287	mRNA	TOT_040000287	NC_025263.1	626720	627886	R	TOT_040000287	complement(join(<626720..626763,626797..626852,627086..627126,627156..627224,627254..627385,627417..627512,627543..627590,627623..627670,627702..627774,627861..>627886))	Theileria orientalis strain Shintoku	20716365
TOT_040000288	mRNA	TOT_040000288	NC_025263.1	629127	630421	D	TOT_040000288	join(<629127..629970,630003..>630421)	Theileria orientalis strain Shintoku	20716366
TOT_040000289	mRNA	TOT_040000289	NC_025263.1	631007	633277	D	TOT_040000289	join(<631007..631873,631952..632075,632330..632544,632579..>633277)	Theileria orientalis strain Shintoku	20716367
TOT_040000290	mRNA	TOT_040000290	NC_025263.1	633281	633741	R	TOT_040000290	complement(join(<633281..633390,633425..633543,633581..633653,633687..>633741))	Theileria orientalis strain Shintoku	20716368
TOT_040000291	mRNA	TOT_040000291	NC_025263.1	633850	636096	D	TOT_040000291	<633850..>636096	Theileria orientalis strain Shintoku	20716369
TOT_040000292	mRNA	TOT_040000292	NC_025263.1	636267	636490	R	TOT_040000292	complement(join(<636267..636323,636356..>636490))	Theileria orientalis strain Shintoku	20716370
TOT_040000293	mRNA	TOT_040000293	NC_025263.1	636597	638330	D	TOT_040000293	join(<636597..636885,636921..637501,637540..637634,637751..>638330)	Theileria orientalis strain Shintoku	20716371
TOT_040000294	mRNA	TOT_040000294	NC_025263.1	638521	639098	R	TOT_040000294	complement(join(<638521..638792,638897..>639098))	Theileria orientalis strain Shintoku	20716372
TOT_040000295	mRNA	TOT_040000295	NC_025263.1	639205	639768	R	TOT_040000295	complement(<639205..>639768)	Theileria orientalis strain Shintoku	20716373
TOT_040000296	mRNA	TOT_040000296	NC_025263.1	640193	640769	D	TOT_040000296	join(<640193..640486,640522..640598,640628..>640769)	Theileria orientalis strain Shintoku	20716374
TOT_040000297	mRNA	TOT_040000297	NC_025263.1	640891	641667	D	TOT_040000297	<640891..>641667	Theileria orientalis strain Shintoku	20716375
TOT_040000938	mRNA	TOT_040000938	NC_025263.1	641911	645066	R	TOT_040000938	complement(join(<641911..642399,642512..642630,642719..642862,642981..643217,643347..643591,643692..643922,643955..644316,644347..644527,644561..>645066))	Theileria orientalis strain Shintoku	20716958
TOT_040000939	mRNA	TOT_040000939	NC_025263.1	645277	646455	R	TOT_040000939	complement(<645277..>646455)	Theileria orientalis strain Shintoku	20716959
TOT_040000300	mRNA	TOT_040000300	NC_025263.1	646753	647925	R	TOT_040000300	complement(<646753..>647925)	Theileria orientalis strain Shintoku	20716376
TOT_040000301	mRNA	TOT_040000301	NC_025263.1	648493	649677	R	TOT_040000301	complement(<648493..>649677)	Theileria orientalis strain Shintoku	20716377
TOT_040000940	mRNA	TOT_040000940	NC_025263.1	650351	651376	D	TOT_040000940	<650351..>651376	Theileria orientalis strain Shintoku	20716960
TOT_040000303	mRNA	TOT_040000303	NC_025263.1	651750	652421	D	TOT_040000303	join(<651750..652193,652230..>652421)	Theileria orientalis strain Shintoku	20716378
TOT_040000304	mRNA	TOT_040000304	NC_025263.1	652575	656654	D	TOT_040000304	join(<652575..653091,653120..653203,653252..653363,653400..653606,653663..653820,653882..653935,653965..654018,654051..654228,654313..654405,654434..654915,654948..655097,655168..655284,655332..655420,655518..656031,656171..656283,656364..>656654)	Theileria orientalis strain Shintoku	20716379
TOT_040000305	mRNA	TOT_040000305	NC_025263.1	656807	657619	D	TOT_040000305	join(<656807..657328,657464..>657619)	Theileria orientalis strain Shintoku	20716380
TOT_040000941	mRNA	TOT_040000941	NC_025263.1	657815	658782	D	TOT_040000941	join(<657815..657903,657960..658017,658119..658209,658274..658327,658361..658404,658437..658568,658663..>658782)	Theileria orientalis strain Shintoku	20716961
TOT_040000307	mRNA	TOT_040000307	NC_025263.1	659455	660015	D	TOT_040000307	join(<659455..659644,659738..>660015)	Theileria orientalis strain Shintoku	20716381
TOT_040000308	mRNA	TOT_040000308	NC_025263.1	660196	660661	D	TOT_040000308	join(<660196..660327,660398..>660661)	Theileria orientalis strain Shintoku	20716382
TOT_040000309	mRNA	TOT_040000309	NC_025263.1	660722	661263	R	TOT_040000309	complement(join(<660722..660801,660957..>661263))	Theileria orientalis strain Shintoku	20716383
TOT_040000310	mRNA	TOT_040000310	NC_025263.1	661505	663540	R	TOT_040000310	complement(join(<661505..661837,661874..661966,662031..662124,662217..662326,662450..662557,662658..663197,663253..>663540))	Theileria orientalis strain Shintoku	20716384
TOT_040000311	mRNA	TOT_040000311	NC_025263.1	663911	667171	R	TOT_040000311	complement(join(<663911..664081,664125..664214,664241..664356,664469..664691,664987..665541,665574..665632,665806..666005,666147..666888,666961..>667171))	Theileria orientalis strain Shintoku	20716385
TOT_040000942	mRNA	TOT_040000942	NC_025263.1	667720	669528	D	TOT_040000942	join(<667720..667974,668040..668117,668181..668268,668352..668576,668643..669012,669045..669156,669274..>669528)	Theileria orientalis strain Shintoku	20716962
TOT_040000313	mRNA	TOT_040000313	NC_025263.1	669784	671709	R	TOT_040000313	complement(<669784..>671709)	Theileria orientalis strain Shintoku	20716386
TOT_040000943	mRNA	TOT_040000943	NC_025263.1	672116	672910	R	TOT_040000943	complement(join(<672116..672259,672299..672581,672618..672808,672908..>672910))	Theileria orientalis strain Shintoku	20716963
TOT_040000315	mRNA	TOT_040000315	NC_025263.1	673195	674061	R	TOT_040000315	complement(join(<673195..673305,673375..673692,673819..>674061))	Theileria orientalis strain Shintoku	20716387
TOT_040000316	mRNA	TOT_040000316	NC_025263.1	674901	675379	D	TOT_040000316	join(<674901..675033,675066..675187,675254..>675379)	Theileria orientalis strain Shintoku	20716388
TOT_040000317	mRNA	TOT_040000317	NC_025263.1	675529	676642	D	TOT_040000317	join(<675529..675790,675856..676102,676145..676359,676392..>676642)	Theileria orientalis strain Shintoku	20716389
TOT_040000319	mRNA	TOT_040000319	NC_025263.1	680503	684821	R	TOT_040000319	complement(join(<680503..680545,680554..680685,680929..682190,682371..682462,682537..682929,683192..683437,683597..683848,683912..684404,684726..>684821))	Theileria orientalis strain Shintoku	20716390
TOT_040000320	mRNA	TOT_040000320	NC_025263.1	685410	687436	R	TOT_040000320	complement(join(<685410..685544,685611..685906,686010..686364,686486..>687436))	Theileria orientalis strain Shintoku	20716391
TOT_040000321	mRNA	TOT_040000321	NC_025263.1	687946	689876	D	TOT_040000321	join(<687946..689528,689756..>689876)	Theileria orientalis strain Shintoku	20716392
TOT_040000322	mRNA	TOT_040000322	NC_025263.1	690048	690590	R	TOT_040000322	complement(join(<690048..690220,690422..>690590))	Theileria orientalis strain Shintoku	20716393
TOT_040000323	mRNA	TOT_040000323	NC_025263.1	691324	694077	D	TOT_040000323	join(<691324..692483,692559..693438,693607..>694077)	Theileria orientalis strain Shintoku	20716394
TOT_040000324	mRNA	TOT_040000324	NC_025263.1	694319	696281	D	TOT_040000324	join(<694319..694545,694577..694735,694860..695010,695070..695256,695341..695414,695445..695550,695628..695751,695782..695819,695888..696053,696083..>696281)	Theileria orientalis strain Shintoku	20716395
TOT_040000325	mRNA	TOT_040000325	NC_025263.1	696597	698337	D	TOT_040000325	join(<696597..696786,696983..>698337)	Theileria orientalis strain Shintoku	20716396
TOT_040000944	mRNA	TOT_040000944	NC_025263.1	698692	700283	D	TOT_040000944	join(<698692..698782,698852..699061,699185..699320,699379..699777,699834..699995,700130..>700283)	Theileria orientalis strain Shintoku	20716964
TOT_040000945	mRNA	TOT_040000945	NC_025263.1	700741	702006	D	TOT_040000945	join(<700741..700786,700910..701045,701109..701471,701588..701749,701853..>702006)	Theileria orientalis strain Shintoku	20716965
TOT_040000946	mRNA	TOT_040000946	NC_025263.1	702208	703718	D	TOT_040000946	join(<702208..702553,702677..702812,702876..703274,703349..703510,703565..>703718)	Theileria orientalis strain Shintoku	20716966
TOT_040000947	mRNA	TOT_040000947	NC_025263.1	703831	704939	D	TOT_040000947	join(<703831..704288,704407..704533,704600..704743,704775..>704939)	Theileria orientalis strain Shintoku	20716967
TOT_040000328	mRNA	TOT_040000328	NC_025263.1	705064	706454	R	TOT_040000328	complement(join(<705064..705465,705642..>706454))	Theileria orientalis strain Shintoku	20716397
TOT_040000329	mRNA	TOT_040000329	NC_025263.1	707070	707468	D	TOT_040000329	join(<707070..707164,707414..>707468)	Theileria orientalis strain Shintoku	20716398
TOT_040000330	mRNA	TOT_040000330	NC_025263.1	707503	709003	D	TOT_040000330	join(<707503..708850,708993..>709003)	Theileria orientalis strain Shintoku	20716399
TOT_040000331	mRNA	TOT_040000331	NC_025263.1	709051	709453	R	TOT_040000331	complement(join(<709051..709104,709164..709287,709335..>709453))	Theileria orientalis strain Shintoku	20716400
TOT_040000332	mRNA	TOT_040000332	NC_025263.1	710267	712825	D	TOT_040000332	join(<710267..711501,711658..711929,712032..712619,712728..>712825)	Theileria orientalis strain Shintoku	20716401
TOT_040000333	mRNA	TOT_040000333	NC_025263.1	712962	715716	D	TOT_040000333	join(<712962..713957,714041..714147,714218..714402,714485..714633,714709..714869,714937..715066,715168..715210,715284..715430,715529..>715716)	Theileria orientalis strain Shintoku	20716402
TOT_040000334	mRNA	TOT_040000334	NC_025263.1	715992	716375	R	TOT_040000334	complement(<715992..>716375)	Theileria orientalis strain Shintoku	20716403
TOT_040000335	mRNA	TOT_040000335	NC_025263.1	716376	717333	R	TOT_040000335	complement(join(<716376..716422,716437..716708,716739..717147,717237..>717333))	Theileria orientalis strain Shintoku	20716404
TOT_040000336	mRNA	TOT_040000336	NC_025263.1	717866	726051	D	TOT_040000336	join(<717866..719356,719411..719803,720146..720873,720928..721198,721259..721360,721733..723204,723244..724053,724215..724294,724381..724697,724860..725252,725385..725471,725692..725881,725963..>726051)	Theileria orientalis strain Shintoku	20716405
TOT_040000337	mRNA	TOT_040000337	NC_025263.1	726811	729593	D	TOT_040000337	join(<726811..726878,726908..726997,727029..727152,727222..727386,727401..727700,727815..727979,728035..728176,728264..728848,728878..729221,729318..>729593)	Theileria orientalis strain Shintoku	20716406
TOT_040000338	mRNA	TOT_040000338	NC_025263.1	729699	730822	R	TOT_040000338	complement(join(<729699..729737,729875..>730822))	Theileria orientalis strain Shintoku	20716407
TOT_040000339	mRNA	TOT_040000339	NC_025263.1	731115	735681	D	TOT_040000339	join(<731115..731367,731399..731622,731653..732309,732393..732872,733047..733294,733502..734236,734297..734372,734466..734685,734809..734947,735077..735196,735357..>735681)	Theileria orientalis strain Shintoku	20716408
TOT_040000340	mRNA	TOT_040000340	NC_025263.1	736096	737469	R	TOT_040000340	complement(join(<736096..736266,736330..>737469))	Theileria orientalis strain Shintoku	20716409
TOT_040000341	mRNA	TOT_040000341	NC_025263.1	737976	742189	D	TOT_040000341	join(<737976..738252,738354..738622,738658..739759,739854..740028,740234..740419,740731..741059,741204..741399,742102..>742189)	Theileria orientalis strain Shintoku	20716410
TOT_040000342	mRNA	TOT_040000342	NC_025263.1	742191	747127	R	TOT_040000342	complement(join(<742191..742197,742365..742454,742574..743199,743231..743353,743385..744036,744192..744958,744996..745055,745142..745356,745395..746274,746663..746719,746873..>747127))	Theileria orientalis strain Shintoku	20716411
TOT_040000948	mRNA	TOT_040000948	NC_025263.1	747557	747813	R	TOT_040000948	complement(join(<747557..747628,747661..>747813))	Theileria orientalis strain Shintoku	20716968
TOT_040000949	mRNA	TOT_040000949	NC_025263.1	748608	748772	D	TOT_040000949	<748608..>748772	Theileria orientalis strain Shintoku	20716969
TOT_040000950	mRNA	TOT_040000950	NC_025263.1	749151	750380	R	TOT_040000950	complement(<749151..>750380)	Theileria orientalis strain Shintoku	20716970
TOT_040000346	mRNA	TOT_040000346	NC_025263.1	751357	751796	D	TOT_040000346	join(<751357..751524,751605..>751796)	Theileria orientalis strain Shintoku	20716412
TOT_040000347	mRNA	TOT_040000347	NC_025263.1	752114	754544	R	TOT_040000347	complement(join(<752114..752428,752596..753413,753588..754209,754263..754339,754400..>754544))	Theileria orientalis strain Shintoku	20716413
TOT_040000348	mRNA	TOT_040000348	NC_025263.1	755016	755879	D	TOT_040000348	join(<755016..755154,755194..755309,755362..755435,755467..755564,755597..755700,755730..>755879)	Theileria orientalis strain Shintoku	20716414
TOT_040000349	mRNA	TOT_040000349	NC_025263.1	756565	758324	R	TOT_040000349	complement(join(<756565..756860,756890..757335,757367..757914,757947..>758324))	Theileria orientalis strain Shintoku	20716415
TOT_040000350	mRNA	TOT_040000350	NC_025263.1	758897	759715	D	TOT_040000350	<758897..>759715	Theileria orientalis strain Shintoku	20716416
TOT_040000351	mRNA	TOT_040000351	NC_025263.1	759986	763343	R	TOT_040000351	complement(join(<759986..760428,760512..760623,760665..760795,760836..761062,761086..761157,761224..761456,761507..761715,761775..761823,761887..762020,762053..762126,762187..762298,762369..762521,762587..762797,762869..762976,763104..>763343))	Theileria orientalis strain Shintoku	20716417
TOT_040000352	mRNA	TOT_040000352	NC_025263.1	764061	764213	R	TOT_040000352	complement(<764061..>764213)	Theileria orientalis strain Shintoku	20716418
TOT_040000353	mRNA	TOT_040000353	NC_025263.1	764239	769922	D	TOT_040000353	join(<764239..765169,765242..765684,765793..766747,767024..769152,769323..769444,769532..>769922)	Theileria orientalis strain Shintoku	20716419
TOT_040000354	mRNA	TOT_040000354	NC_025263.1	770184	773181	D	TOT_040000354	join(<770184..770505,770576..>773181)	Theileria orientalis strain Shintoku	20716420
TOT_040000355	mRNA	TOT_040000355	NC_025263.1	773326	773469	D	TOT_040000355	<773326..>773469	Theileria orientalis strain Shintoku	20716421
TOT_040000356	mRNA	TOT_040000356	NC_025263.1	773529	776363	R	TOT_040000356	complement(join(<773529..774128,774365..775002,775150..775533,775671..775962,776001..776041,776231..>776363))	Theileria orientalis strain Shintoku	20716422
TOT_040000357	mRNA	TOT_040000357	NC_025263.1	776634	776933	R	TOT_040000357	complement(<776634..>776933)	Theileria orientalis strain Shintoku	20716423
TOT_040000358	mRNA	TOT_040000358	NC_025263.1	777322	778428	R	TOT_040000358	complement(<777322..>778428)	Theileria orientalis strain Shintoku	20716424
TOT_040000359	mRNA	TOT_040000359	NC_025263.1	779931	780527	D	TOT_040000359	<779931..>780527	Theileria orientalis strain Shintoku	20716425
TOT_040000360	mRNA	TOT_040000360	NC_025263.1	780735	782221	D	TOT_040000360	join(<780735..780827,780924..781014,781114..781144,781224..781367,781468..781711,781850..781957,782001..782033,782108..>782221)	Theileria orientalis strain Shintoku	20716426
TOT_040000361	mRNA	TOT_040000361	NC_025263.1	782412	783557	D	TOT_040000361	join(<782412..782687,782772..783020,783079..783179,783320..783390,783502..>783557)	Theileria orientalis strain Shintoku	20716427
TOT_040000362	mRNA	TOT_040000362	NC_025263.1	783774	785252	R	TOT_040000362	complement(join(<783774..783848,784027..784143,784449..785002,785120..>785252))	Theileria orientalis strain Shintoku	20716428
TOT_040000363	mRNA	TOT_040000363	NC_025263.1	786411	788420	D	TOT_040000363	join(<786411..786999,787246..>788420)	Theileria orientalis strain Shintoku	20716429
TOT_040000364	mRNA	TOT_040000364	NC_025263.1	788703	789914	R	TOT_040000364	complement(<788703..>789914)	Theileria orientalis strain Shintoku	20716430
TOT_040000365	mRNA	TOT_040000365	NC_025263.1	790246	792415	R	TOT_040000365	complement(join(<790246..790377,790408..790564,790701..790761,790796..790919,791095..791295,791338..791655,791688..792012,792132..>792415))	Theileria orientalis strain Shintoku	20716431
TOT_040000366	mRNA	TOT_040000366	NC_025263.1	792572	793772	R	TOT_040000366	complement(join(<792572..792713,792744..792898,792951..793082,793116..793636,793706..>793772))	Theileria orientalis strain Shintoku	20716432
TOT_040000367	mRNA	TOT_040000367	NC_025263.1	794085	795851	D	TOT_040000367	join(<794085..794092,794129..794378,794434..794467,794535..794611,794642..794779,794998..795241,795274..795359,795402..795465,795495..795623,795712..>795851)	Theileria orientalis strain Shintoku	20716433
TOT_040000368	mRNA	TOT_040000368	NC_025263.1	795990	801703	R	TOT_040000368	complement(join(<795990..796277,796374..796631,796781..797218,797454..797570,797636..799656,799780..799817,799920..>801703))	Theileria orientalis strain Shintoku	20716434
TOT_040000369	mRNA	TOT_040000369	NC_025263.1	801955	805195	R	TOT_040000369	complement(join(<801955..802115,802147..802273,802304..802390,802421..802478,802510..803164,803255..803692,803725..803897,803985..804259,804291..804506,804536..804606,804636..804690,804721..804758,804790..>805195))	Theileria orientalis strain Shintoku	20716435
TOT_040000370	mRNA	TOT_040000370	NC_025263.1	805431	807242	D	TOT_040000370	join(<805431..805531,805568..805680,805712..805881,805911..806092,806126..806180,806321..806376,806411..806494,806648..>807242)	Theileria orientalis strain Shintoku	20716436
TOT_040000371	mRNA	TOT_040000371	NC_025263.1	807254	808213	R	TOT_040000371	complement(join(<807254..807343,807518..>808213))	Theileria orientalis strain Shintoku	20716437
TOT_040000373	mRNA	TOT_040000373	NC_025263.1	808419	809306	R	TOT_040000373	complement(join(<808419..808610,808700..808832,808869..809193,809225..>809306))	Theileria orientalis strain Shintoku	20716439
TOT_040000372	mRNA	TOT_040000372	NC_025263.1	808447	808614	D	TOT_040000372	<808447..>808614	Theileria orientalis strain Shintoku	20716438
TOT_040000374	mRNA	TOT_040000374	NC_025263.1	809795	811116	D	TOT_040000374	join(<809795..810796,810871..811011,811048..>811116)	Theileria orientalis strain Shintoku	20716440
TOT_040000375	mRNA	TOT_040000375	NC_025263.1	811496	812280	D	TOT_040000375	join(<811496..811538,811573..811657,811720..811788,811821..812045,812076..812140,812174..>812280)	Theileria orientalis strain Shintoku	20716441
TOT_040000376	mRNA	TOT_040000376	NC_025263.1	813046	815382	R	TOT_040000376	complement(join(<813046..813916,814125..814189,814220..814298,814332..814431,814464..>815382))	Theileria orientalis strain Shintoku	20716442
TOT_040000377	mRNA	TOT_040000377	NC_025263.1	815623	816882	R	TOT_040000377	complement(join(<815623..816148,816278..>816882))	Theileria orientalis strain Shintoku	20716443
TOT_040000378	mRNA	TOT_040000378	NC_025263.1	817382	817731	D	TOT_040000378	join(<817382..817457,817488..817571,817603..817662,817697..>817731)	Theileria orientalis strain Shintoku	20716444
TOT_040000379	mRNA	TOT_040000379	NC_025263.1	817822	818645	R	TOT_040000379	complement(join(<817822..818279,818312..>818645))	Theileria orientalis strain Shintoku	20716445
TOT_040000380	mRNA	TOT_040000380	NC_025263.1	819033	819821	D	TOT_040000380	join(<819033..819142,819181..819297,819330..819462,819540..>819821)	Theileria orientalis strain Shintoku	20716446
TOT_040000381	mRNA	TOT_040000381	NC_025263.1	819925	823274	D	TOT_040000381	join(<819925..820120,820152..822265,822306..822370,822402..823116,823149..>823274)	Theileria orientalis strain Shintoku	20716447
TOT_040000382	mRNA	TOT_040000382	NC_025263.1	823291	824157	R	TOT_040000382	complement(join(<823291..823358,823525..823654,823686..823824,823864..823949,823990..>824157))	Theileria orientalis strain Shintoku	20716448
TOT_040000951	mRNA	TOT_040000951	NC_025263.1	824254	825001	R	TOT_040000951	complement(join(<824254..824821,824982..>825001))	Theileria orientalis strain Shintoku	20716971
TOT_040000900	mRNA	TOT_040000900	NC_025263.1	825290	829669	R	TOT_040000900	complement(join(<825290..825422,825503..826290,826322..826771,826999..827843,828131..829435,829465..>829669))	Theileria orientalis strain Shintoku	20716925
TOT_040000383	mRNA	TOT_040000383	NC_025263.1	830463	832307	D	TOT_040000383	join(<830463..830789,830821..831006,831038..831242,831289..831396,831483..831764,831798..831913,832062..832164,832198..>832307)	Theileria orientalis strain Shintoku	20716449
TOT_040000384	mRNA	TOT_040000384	NC_025263.1	832366	832740	D	TOT_040000384	join(<832366..832479,832511..832618,832648..>832740)	Theileria orientalis strain Shintoku	20716450
TOT_040000385	mRNA	TOT_040000385	NC_025263.1	832842	834011	R	TOT_040000385	complement(join(<832842..832943,832955..833763,833828..833890,833921..>834011))	Theileria orientalis strain Shintoku	20716451
TOT_040000386	mRNA	TOT_040000386	NC_025263.1	834506	835921	D	TOT_040000386	<834506..>835921	Theileria orientalis strain Shintoku	20716452
TOT_040000387	mRNA	TOT_040000387	NC_025263.1	836322	839390	R	TOT_040000387	complement(<836322..>839390)	Theileria orientalis strain Shintoku	20716453
TOT_040000388	mRNA	TOT_040000388	NC_025263.1	839631	840872	R	TOT_040000388	complement(join(<839631..840274,840333..840554,840692..>840872))	Theileria orientalis strain Shintoku	20716454
TOT_040000901	mRNA	TOT_040000901	NC_025263.1	841396	841846	R	TOT_040000901	complement(join(<841396..841509,841575..841684,841723..>841846))	Theileria orientalis strain Shintoku	20716926
TOT_040000389	mRNA	TOT_040000389	NC_025263.1	842091	842973	R	TOT_040000389	complement(join(<842091..842237,842271..842348,842382..842462,842497..842562,842602..842744,842796..>842973))	Theileria orientalis strain Shintoku	20716455
TOT_040000390	mRNA	TOT_040000390	NC_025263.1	844285	846852	D	TOT_040000390	join(<844285..845329,845543..>846852)	Theileria orientalis strain Shintoku	20716456
TOT_040000391	mRNA	TOT_040000391	NC_025263.1	846945	847301	D	TOT_040000391	join(<846945..847149,847180..>847301)	Theileria orientalis strain Shintoku	20716457
TOT_040000392	mRNA	TOT_040000392	NC_025263.1	847677	850474	R	TOT_040000392	complement(join(<847677..847765,847805..848248,848288..848399,848438..848574,848799..848922,848959..849470,849655..850335,850366..>850474))	Theileria orientalis strain Shintoku	20716458
TOT_040000393	mRNA	TOT_040000393	NC_025263.1	850757	852174	R	TOT_040000393	complement(join(<850757..850836,850887..851297,851504..851993,852025..>852174))	Theileria orientalis strain Shintoku	20716459
TOT_040000394	mRNA	TOT_040000394	NC_025263.1	852993	853904	R	TOT_040000394	complement(<852993..>853904)	Theileria orientalis strain Shintoku	20716460
TOT_040000395	mRNA	TOT_040000395	NC_025263.1	854716	856452	D	TOT_040000395	join(<854716..854863,854922..855033,855070..855339,855374..855455,855486..855637,855668..855785,855897..855992,856031..856243,856357..>856452)	Theileria orientalis strain Shintoku	20716461
TOT_040000396	mRNA	TOT_040000396	NC_025263.1	856566	859165	R	TOT_040000396	complement(join(<856566..856666,856783..857551,857591..>859165))	Theileria orientalis strain Shintoku	20716462
TOT_040000397	mRNA	TOT_040000397	NC_025263.1	859289	868096	D	TOT_040000397	join(<859289..859309,859592..865423,865619..867424,867435..867531,867616..867797,867860..>868096)	Theileria orientalis strain Shintoku	20716463
TOT_040000398	mRNA	TOT_040000398	NC_025263.1	868281	869016	R	TOT_040000398	complement(join(<868281..868772,868804..868856,868887..>869016))	Theileria orientalis strain Shintoku	20716464
TOT_040000399	mRNA	TOT_040000399	NC_025263.1	869206	876430	R	TOT_040000399	complement(join(<869206..870044,870118..870125,870164..872356,872444..872830,872981..875015,875046..875221,875254..875425,875455..875503,875533..875601,875635..875719,875749..875998,876028..876099,876130..876222,876265..>876430))	Theileria orientalis strain Shintoku	20716465
TOT_040000400	mRNA	TOT_040000400	NC_025263.1	877045	880515	D	TOT_040000400	join(<877045..877264,877296..877493,877525..877833,877865..>880515)	Theileria orientalis strain Shintoku	20716466
TOT_040000952	mRNA	TOT_040000952	NC_025263.1	880775	882192	D	TOT_040000952	join(<880775..880983,881015..881273,881306..881497,881529..881619,881744..>882192)	Theileria orientalis strain Shintoku	20716972
TOT_040000402	mRNA	TOT_040000402	NC_025263.1	882194	883711	R	TOT_040000402	complement(join(<882194..882308,882344..882416,882454..882629,882669..883054,883085..883156,883189..883257,883290..883372,883403..883544,883575..883649,883682..>883711))	Theileria orientalis strain Shintoku	20716467
TOT_040000403	mRNA	TOT_040000403	NC_025263.1	884046	884895	D	TOT_040000403	join(<884046..884262,884293..884419,884449..884572,884608..>884895)	Theileria orientalis strain Shintoku	20716468
TOT_040000953	mRNA	TOT_040000953	NC_025263.1	885612	885869	D	TOT_040000953	<885612..>885869	Theileria orientalis strain Shintoku	20716973
TOT_040000405	mRNA	TOT_040000405	NC_025263.1	886039	886504	R	TOT_040000405	complement(join(<886039..886173,886208..>886504))	Theileria orientalis strain Shintoku	20716469
TOT_040000406	mRNA	TOT_040000406	NC_025263.1	886512	888799	R	TOT_040000406	complement(join(<886512..886635,886668..886776,886811..886915,886959..887195,887227..887320,887353..887451,887492..887549,887583..887730,887772..887875,887907..888000,888031..888100,888139..888175,888209..888366,888403..888631,888666..>888799))	Theileria orientalis strain Shintoku	20716470
TOT_040000407	mRNA	TOT_040000407	NC_025263.1	888936	892339	R	TOT_040000407	complement(join(<888936..889231,889320..889833,889948..890438,890470..890604,890637..890728,890833..890991,891023..891104,891187..891315,891352..>892339))	Theileria orientalis strain Shintoku	20716471
TOT_040000408	mRNA	TOT_040000408	NC_025263.1	892575	894490	R	TOT_040000408	complement(join(<892575..894266,894377..>894490))	Theileria orientalis strain Shintoku	20716472
TOT_040000409	mRNA	TOT_040000409	NC_025263.1	894733	900147	R	TOT_040000409	complement(<894733..>900147)	Theileria orientalis strain Shintoku	20716473
TOT_040000410	mRNA	TOT_040000410	NC_025263.1	900500	903318	R	TOT_040000410	complement(join(<900500..900628,900659..900735,900765..901011,901053..901531,901569..901783,901823..902057,902091..902220,902251..902330,902361..902448,902481..903112,903156..>903318))	Theileria orientalis strain Shintoku	20716474
TOT_040000411	mRNA	TOT_040000411	NC_025263.1	903878	904300	D	TOT_040000411	join(<903878..903883,903915..904177,904207..>904300)	Theileria orientalis strain Shintoku	20716475
TOT_040000412	mRNA	TOT_040000412	NC_025263.1	904519	906401	D	TOT_040000412	join(<904519..904793,904825..904919,904951..905331,905363..905456,905488..905633,905719..905785,905819..905913,905974..906134,906177..>906401)	Theileria orientalis strain Shintoku	20716476
TOT_040000413	mRNA	TOT_040000413	NC_025263.1	906489	907220	D	TOT_040000413	<906489..>907220	Theileria orientalis strain Shintoku	20716477
TOT_040000414	mRNA	TOT_040000414	NC_025263.1	907389	910268	D	TOT_040000414	join(<907389..907463,907496..907601,907634..907745,907777..907961,907991..908181,908212..908415,908459..908553,908697..908949,909028..909145,909168..909271,909353..909529,909684..910107,910138..>910268)	Theileria orientalis strain Shintoku	20716478
TOT_040000415	mRNA	TOT_040000415	NC_025263.1	910340	910761	D	TOT_040000415	join(<910340..910438,910475..910526,910562..>910761)	Theileria orientalis strain Shintoku	20716479
TOT_040000416	mRNA	TOT_040000416	NC_025263.1	910989	914351	R	TOT_040000416	complement(join(<910989..911269,911651..913898,914085..>914351))	Theileria orientalis strain Shintoku	20716480
TOT_040000417	mRNA	TOT_040000417	NC_025263.1	914822	918143	R	TOT_040000417	complement(join(<914822..917350,917370..>918143))	Theileria orientalis strain Shintoku	20716481
TOT_040000418	mRNA	TOT_040000418	NC_025263.1	918380	919851	R	TOT_040000418	complement(join(<918380..918595,918627..918760,918791..918927,918960..919095,919125..919422,919455..919742,919783..>919851))	Theileria orientalis strain Shintoku	20716482
TOT_040000419	mRNA	TOT_040000419	NC_025263.1	920144	921537	D	TOT_040000419	join(<920144..920195,920327..920386,920419..920537,920567..920666,920698..920805,920837..920900,920936..921170,921274..>921537)	Theileria orientalis strain Shintoku	20716483
TOT_040000420	mRNA	TOT_040000420	NC_025263.1	921855	923782	R	TOT_040000420	complement(join(<921855..922746,922850..922912,922944..923072,923175..923301,923335..923428,923461..923645,923683..>923782))	Theileria orientalis strain Shintoku	20716484
TOT_040000954	mRNA	TOT_040000954	NC_025263.1	924160	926034	D	TOT_040000954	join(<924160..924660,924693..924890,924925..925207,925251..925403,925439..925724,925760..925899,925937..>926034)	Theileria orientalis strain Shintoku	20716974
TOT_040000955	mRNA	TOT_040000955	NC_025263.1	926206	928965	D	TOT_040000955	join(<926206..926547,926581..926681,926715..926871,927064..928096,928221..928258,928403..928528,928720..>928965)	Theileria orientalis strain Shintoku	20716975
TOT_040000423	mRNA	TOT_040000423	NC_025263.1	929284	929922	R	TOT_040000423	complement(<929284..>929922)	Theileria orientalis strain Shintoku	20716485
TOT_040000424	mRNA	TOT_040000424	NC_025263.1	930769	931925	D	TOT_040000424	join(<930769..930771,930801..>931925)	Theileria orientalis strain Shintoku	20716486
TOT_040000425	mRNA	TOT_040000425	NC_025263.1	932034	932998	R	TOT_040000425	complement(join(<932034..932179,932214..932300,932352..932433,932465..932578,932609..932683,932715..932783,932822..>932998))	Theileria orientalis strain Shintoku	20716487
TOT_040000426	mRNA	TOT_040000426	NC_025263.1	933270	935224	R	TOT_040000426	complement(join(<933270..933544,933584..933721,933769..933773,933909..933940,933973..934062,934096..934156,934188..934269,934345..934402,934433..934606,934636..934712,934744..934961,935007..>935224))	Theileria orientalis strain Shintoku	20716488
TOT_040000427	mRNA	TOT_040000427	NC_025263.1	935400	936625	R	TOT_040000427	complement(join(<935400..935724,935755..935904,935937..936541,936578..>936625))	Theileria orientalis strain Shintoku	20716489
TOT_040000428	mRNA	TOT_040000428	NC_025263.1	936858	937496	R	TOT_040000428	complement(join(<936858..936937,936977..937088,937128..937192,937226..>937496))	Theileria orientalis strain Shintoku	20716490
TOT_040000429	mRNA	TOT_040000429	NC_025263.1	938127	941762	D	TOT_040000429	join(<938127..938199,938250..938445,938481..938543,938576..938657,938689..939007,939082..939150,939180..939241,939277..939777,939989..940297,940534..940695,940728..>941762)	Theileria orientalis strain Shintoku	20716491
TOT_040000430	mRNA	TOT_040000430	NC_025263.1	941764	941925	R	TOT_040000430	complement(<941764..>941925)	Theileria orientalis strain Shintoku	20716492
TOT_040000431	mRNA	TOT_040000431	NC_025263.1	941973	942647	D	TOT_040000431	join(<941973..942004,942095..942176,942207..942419,942543..>942647)	Theileria orientalis strain Shintoku	20716493
TOT_040000432	mRNA	TOT_040000432	NC_025263.1	943213	945330	D	TOT_040000432	<943213..>945330	Theileria orientalis strain Shintoku	20716494
TOT_040000433	mRNA	TOT_040000433	NC_025263.1	945522	948942	D	TOT_040000433	join(<945522..947109,947224..948439,948670..948896,948923..>948942)	Theileria orientalis strain Shintoku	20716495
TOT_040000434	mRNA	TOT_040000434	NC_025263.1	949124	951086	R	TOT_040000434	complement(join(<949124..950491,950658..>951086))	Theileria orientalis strain Shintoku	20716496
TOT_040000435	mRNA	TOT_040000435	NC_025263.1	951580	951960	D	TOT_040000435	join(<951580..951731,951765..>951960)	Theileria orientalis strain Shintoku	20716497
TOT_040000436	mRNA	TOT_040000436	NC_025263.1	952032	952374	R	TOT_040000436	complement(join(<952032..952130,952162..>952374))	Theileria orientalis strain Shintoku	20716498
TOT_040000437	mRNA	TOT_040000437	NC_025263.1	953518	957339	D	TOT_040000437	join(<953518..956163,956221..956751,956842..>957339)	Theileria orientalis strain Shintoku	20716499
TOT_040000438	mRNA	TOT_040000438	NC_025263.1	957585	960609	D	TOT_040000438	join(<957585..957673,957748..957845,957911..958253,958331..958392,958460..958521,958553..958998,959196..960362,960495..>960609)	Theileria orientalis strain Shintoku	20716500
TOT_040000439	mRNA	TOT_040000439	NC_025263.1	960917	961381	D	TOT_040000439	join(<960917..961062,961135..>961381)	Theileria orientalis strain Shintoku	20716501
TOT_040000440	mRNA	TOT_040000440	NC_025263.1	961382	962974	R	TOT_040000440	complement(join(<961382..961431,961555..961699,961730..961894,962052..962122,962151..962534,962628..962831,962863..>962974))	Theileria orientalis strain Shintoku	20716502
TOT_040000441	mRNA	TOT_040000441	NC_025263.1	963071	965562	R	TOT_040000441	complement(join(<963071..963176,963258..963358,963403..963474,963594..963999,964030..964355,964387..964690,964720..964810,964914..965034,965064..965218,965295..>965562))	Theileria orientalis strain Shintoku	20716503
TOT_040000442	mRNA	TOT_040000442	NC_025263.1	966212	971097	D	TOT_040000442	join(<966212..966400,966484..966522,966554..966753,966798..966954,966990..967120,967158..967276,967327..967441,967477..967520,967559..968185,968285..968364,968540..969544,969681..970159,970313..970341,970383..970459,970669..>971097)	Theileria orientalis strain Shintoku	20716504
TOT_040000443	mRNA	TOT_040000443	NC_025263.1	971325	975168	R	TOT_040000443	complement(join(<971325..972236,972281..972967,973102..973455,973474..973645,973678..973903,973936..974224,974363..974493,974994..>975168))	Theileria orientalis strain Shintoku	20716505
TOT_040000444	mRNA	TOT_040000444	NC_025263.1	975362	977822	D	TOT_040000444	join(<975362..976630,976743..976896,977014..>977822)	Theileria orientalis strain Shintoku	20716506
TOT_040000956	mRNA	TOT_040000956	NC_025263.1	978109	978528	R	TOT_040000956	complement(join(<978109..978280,978422..>978528))	Theileria orientalis strain Shintoku	20716976
TOT_040000446	mRNA	TOT_040000446	NC_025263.1	978591	982614	R	TOT_040000446	complement(join(<978591..978628,978709..978871,978997..979093,979137..979279,979330..980033,980268..981128,981270..981429,981460..981600,981633..981790,981831..981918,981950..981983,982013..982251,982369..>982614))	Theileria orientalis strain Shintoku	20716507
TOT_040000447	mRNA	TOT_040000447	NC_025263.1	982849	983326	D	TOT_040000447	join(<982849..983063,983155..>983326)	Theileria orientalis strain Shintoku	20716508
TOT_040000448	mRNA	TOT_040000448	NC_025263.1	983513	984903	R	TOT_040000448	complement(join(<983513..984702,984852..>984903))	Theileria orientalis strain Shintoku	20716509
TOT_040000449	mRNA	TOT_040000449	NC_025263.1	985282	986119	R	TOT_040000449	complement(join(<985282..985359,985400..985453,985486..985934,986008..>986119))	Theileria orientalis strain Shintoku	20716510
TOT_040000450	mRNA	TOT_040000450	NC_025263.1	986336	989303	D	TOT_040000450	join(<986336..986437,986540..986640,986683..986937,986969..987059,987101..987210,987231..987384,987438..987506,987635..987710,987757..987885,987980..988062,988228..988496,988589..988841,988874..989011,989043..989110,989177..>989303)	Theileria orientalis strain Shintoku	20716511
TOT_040000451	mRNA	TOT_040000451	NC_025263.1	989705	991788	D	TOT_040000451	join(<989705..989967,990106..990727,990856..991324,991400..991438,991535..>991788)	Theileria orientalis strain Shintoku	20716512
TOT_040000452	mRNA	TOT_040000452	NC_025263.1	991940	992479	R	TOT_040000452	complement(join(<991940..991979,991984..992090,992312..>992479))	Theileria orientalis strain Shintoku	20716513
TOT_040000453	mRNA	TOT_040000453	NC_025263.1	992584	993486	D	TOT_040000453	join(<992584..993046,993275..>993486)	Theileria orientalis strain Shintoku	20716514
TOT_040000454	mRNA	TOT_040000454	NC_025263.1	993682	994229	D	TOT_040000454	join(<993682..993834,993921..>994229)	Theileria orientalis strain Shintoku	20716515
TOT_040000455	mRNA	TOT_040000455	NC_025263.1	994426	997130	R	TOT_040000455	complement(join(<994426..994665,994722..995266,995941..996297,996353..996643,996711..996932,996998..>997130))	Theileria orientalis strain Shintoku	20716516
TOT_040000456	mRNA	TOT_040000456	NC_025263.1	997918	1000366	D	TOT_040000456	join(<997918..998070,998125..998571,998604..999102,999188..999254,999385..999816,999934..>1000366)	Theileria orientalis strain Shintoku	20716517
TOT_040000457	mRNA	TOT_040000457	NC_025263.1	1000583	1003045	D	TOT_040000457	join(<1000583..1000820,1000854..>1003045)	Theileria orientalis strain Shintoku	20716518
TOT_040000458	mRNA	TOT_040000458	NC_025263.1	1003430	1004919	R	TOT_040000458	complement(join(<1003430..1003576,1003607..1004167,1004222..1004302,1004433..1004722,1004793..>1004919))	Theileria orientalis strain Shintoku	20716519
TOT_040000459	mRNA	TOT_040000459	NC_025263.1	1005682	1006792	D	TOT_040000459	join(<1005682..1006119,1006273..1006574,1006651..>1006792)	Theileria orientalis strain Shintoku	20716520
TOT_040000460	mRNA	TOT_040000460	NC_025263.1	1006897	1008895	D	TOT_040000460	join(<1006897..1007736,1007793..1008794,1008803..>1008895)	Theileria orientalis strain Shintoku	20716521
TOT_040000461	mRNA	TOT_040000461	NC_025263.1	1009364	1013408	R	TOT_040000461	complement(join(<1009364..1009617,1009670..1009862,1010115..1010777,1011074..1012176,1012302..1012742,1012866..1012911,1012942..1013053,1013127..1013221,1013283..>1013408))	Theileria orientalis strain Shintoku	20716522
TOT_040000462	mRNA	TOT_040000462	NC_025263.1	1013816	1015091	R	TOT_040000462	complement(join(<1013816..1013943,1013974..1014040,1014074..1014127,1014159..1014255,1014287..1014345,1014378..1014428,1014465..1014568,1014604..1014700,1014891..>1015091))	Theileria orientalis strain Shintoku	20716523
TOT_040000463	mRNA	TOT_040000463	NC_025263.1	1015338	1016422	R	TOT_040000463	complement(join(<1015338..1015724,1015755..1015842,1015939..1016072,1016102..1016243,1016298..>1016422))	Theileria orientalis strain Shintoku	20716524
TOT_040000464	mRNA	TOT_040000464	NC_025263.1	1016474	1016897	R	TOT_040000464	complement(join(<1016474..1016575,1016624..1016702,1016734..>1016897))	Theileria orientalis strain Shintoku	20716525
TOT_040000465	mRNA	TOT_040000465	NC_025263.1	1017088	1018829	R	TOT_040000465	complement(join(<1017088..1017343,1017376..1017435,1017465..1017552,1017585..1017659,1017692..1017743,1017776..1017832,1017866..1018074,1018106..>1018829))	Theileria orientalis strain Shintoku	20716526
TOT_040000466	mRNA	TOT_040000466	NC_025263.1	1019026	1020402	R	TOT_040000466	complement(join(<1019026..1019432,1019619..>1020402))	Theileria orientalis strain Shintoku	20716527
TOT_040000467	mRNA	TOT_040000467	NC_025263.1	1020689	1023271	R	TOT_040000467	complement(join(<1020689..1020850,1020908..1020991,1021031..1021150,1021223..1021828,1021858..1021995,1022050..1022143,1022176..1022618,1022741..>1023271))	Theileria orientalis strain Shintoku	20716528
TOT_040000468	mRNA	TOT_040000468	NC_025263.1	1024356	1025114	D	TOT_040000468	<1024356..>1025114	Theileria orientalis strain Shintoku	20716529
TOT_040000469	mRNA	TOT_040000469	NC_025263.1	1025155	1025592	R	TOT_040000469	complement(join(<1025155..1025285,1025340..1025414,1025490..>1025592))	Theileria orientalis strain Shintoku	20716530
TOT_040000470	mRNA	TOT_040000470	NC_025263.1	1026831	1028134	D	TOT_040000470	join(<1026831..1027088,1027109..1027426,1027468..1027567,1027600..1027656,1027695..1027783,1027904..1028035,1028066..>1028134)	Theileria orientalis strain Shintoku	20716531
TOT_040000471	mRNA	TOT_040000471	NC_025263.1	1028360	1029964	R	TOT_040000471	complement(join(<1028360..1028530,1028560..1028946,1029050..1029069,1029101..1029149,1029191..1029324,1029391..>1029964))	Theileria orientalis strain Shintoku	20716532
TOT_040000472	mRNA	TOT_040000472	NC_025263.1	1030428	1031849	D	TOT_040000472	join(<1030428..1031395,1031495..1031577,1031734..>1031849)	Theileria orientalis strain Shintoku	20716533
TOT_040000473	mRNA	TOT_040000473	NC_025263.1	1032216	1033691	R	TOT_040000473	complement(<1032216..>1033691)	Theileria orientalis strain Shintoku	20716534
TOT_040000474	mRNA	TOT_040000474	NC_025263.1	1034012	1034959	D	TOT_040000474	<1034012..>1034959	Theileria orientalis strain Shintoku	20716535
TOT_040000475	mRNA	TOT_040000475	NC_025263.1	1035200	1037893	R	TOT_040000475	complement(<1035200..>1037893)	Theileria orientalis strain Shintoku	20716536
TOT_040000476	mRNA	TOT_040000476	NC_025263.1	1038075	1040260	R	TOT_040000476	complement(join(<1038075..1038116,1038147..1038227,1038304..1038396,1038448..1038573,1038606..1038767,1038895..1039008,1039043..1039152,1039186..1039255,1039357..1039459,1039513..1039571,1039604..1039681,1039766..>1040260))	Theileria orientalis strain Shintoku	20716537
TOT_040000477	mRNA	TOT_040000477	NC_025263.1	1040309	1042229	D	TOT_040000477	join(<1040309..1040663,1040697..1041294,1041326..1041386,1041420..1041500,1041530..1041591,1041681..1041834,1041870..>1042229)	Theileria orientalis strain Shintoku	20716538
TOT_040000478	mRNA	TOT_040000478	NC_025263.1	1042769	1045216	R	TOT_040000478	complement(<1042769..>1045216)	Theileria orientalis strain Shintoku	20716539
TOT_040000479	mRNA	TOT_040000479	NC_025263.1	1045394	1045498	R	TOT_040000479	complement(<1045394..>1045498)	Theileria orientalis strain Shintoku	20716540
TOT_040000480	mRNA	TOT_040000480	NC_025263.1	1045643	1047049	R	TOT_040000480	complement(join(<1045643..1045885,1046036..1046495,1046528..1046683,1046723..1046776,1046811..>1047049))	Theileria orientalis strain Shintoku	20716541
TOT_040000481	mRNA	TOT_040000481	NC_025263.1	1047098	1052755	R	TOT_040000481	complement(join(<1047098..1048449,1048630..1052209,1052240..>1052755))	Theileria orientalis strain Shintoku	20716542
TOT_040000482	mRNA	TOT_040000482	NC_025263.1	1052915	1054312	R	TOT_040000482	complement(join(<1052915..1053358,1053397..1053525,1053605..1053687,1053721..1053787,1053818..1053940,1053976..1054135,1054170..>1054312))	Theileria orientalis strain Shintoku	20716543
TOT_040000483	mRNA	TOT_040000483	NC_025263.1	1054652	1056100	D	TOT_040000483	<1054652..>1056100	Theileria orientalis strain Shintoku	20716544
TOT_040000957	mRNA	TOT_040000957	NC_025263.1	1056137	1058356	R	TOT_040000957	complement(join(<1056137..1056217,1056260..1056444,1056490..1056821,1056921..1057288,1057376..1057406,1057493..1057587,1057617..1057801,1057831..>1058356))	Theileria orientalis strain Shintoku	20716977
TOT_040000958	mRNA	TOT_040000958	NC_025263.1	1058461	1060657	R	TOT_040000958	complement(join(<1058461..1058568,1058643..1058852,1058933..1059470,1059658..1059711,1059748..1059812,1059845..>1060657))	Theileria orientalis strain Shintoku	20716978
TOT_040000959	mRNA	TOT_040000959	NC_025263.1	1060742	1061063	R	TOT_040000959	complement(join(<1060742..1060786,1060821..1060970,1061025..>1061063))	Theileria orientalis strain Shintoku	20716979
TOT_040000904	mRNA	TOT_040000904	NC_025263.1	1061913	1062577	R	TOT_040000904	complement(join(<1061913..1061975,1062049..1062128,1062224..1062288,1062423..>1062577))	Theileria orientalis strain Shintoku	20716927
TOT_040000485	mRNA	TOT_040000485	NC_025263.1	1063249	1064623	D	TOT_040000485	join(<1063249..1063563,1063805..>1064623)	Theileria orientalis strain Shintoku	20716545
TOT_040000486	mRNA	TOT_040000486	NC_025263.1	1065065	1067521	D	TOT_040000486	join(<1065065..1065864,1065946..>1067521)	Theileria orientalis strain Shintoku	20716546
TOT_040000487	mRNA	TOT_040000487	NC_025263.1	1068015	1070150	D	TOT_040000487	<1068015..>1070150	Theileria orientalis strain Shintoku	20716547
TOT_040000488	mRNA	TOT_040000488	NC_025263.1	1070700	1071962	D	TOT_040000488	<1070700..>1071962	Theileria orientalis strain Shintoku	20716548
TOT_040000489	mRNA	TOT_040000489	NC_025263.1	1072180	1076461	R	TOT_040000489	complement(join(<1072180..1072576,1072805..1073211,1073344..1073507,1073570..1073840,1074105..1074203,1074344..1074465,1074508..1074597,1074668..1074808,1074934..1075030,1075069..1075242,1075289..1075339,1075371..1075930,1075961..1076220,1076277..>1076461))	Theileria orientalis strain Shintoku	20716549
TOT_040000490	mRNA	TOT_040000490	NC_025263.1	1076951	1080323	R	TOT_040000490	complement(join(<1076951..1077047,1077233..1077402,1077537..1078036,1078060..1078117,1078289..1078489,1078573..1078790,1078825..1078933,1078997..1079063,1079142..1079205,1079235..1079406,1079547..1079664,1079707..1079846,1079877..1080061,1080209..>1080323))	Theileria orientalis strain Shintoku	20716550
TOT_040000491	mRNA	TOT_040000491	NC_025263.1	1080707	1082015	D	TOT_040000491	join(<1080707..1080819,1080864..1080915,1080947..1081099,1081130..1081218,1081346..1081476,1081704..1081776,1081958..>1082015)	Theileria orientalis strain Shintoku	20716551
TOT_040000492	mRNA	TOT_040000492	NC_025263.1	1082132	1082813	R	TOT_040000492	complement(join(<1082132..1082764,1082796..>1082813))	Theileria orientalis strain Shintoku	20716552
TOT_040000493	mRNA	TOT_040000493	NC_025263.1	1083857	1085787	D	TOT_040000493	join(<1083857..1084331,1084388..1084442,1084485..1084593,1084626..1084698,1084732..1085031,1085067..1085383,1085424..1085555,1085587..>1085787)	Theileria orientalis strain Shintoku	20716553
TOT_040000960	mRNA	TOT_040000960	NC_025263.1	1085977	1088329	R	TOT_040000960	complement(join(<1085977..1086117,1086149..1086347,1086389..1086489,1086520..1086637,1086704..1086798,1086846..1087261,1087315..1087465,1087502..1087785,1087816..1088144,1088193..>1088329))	Theileria orientalis strain Shintoku	20716980
TOT_040000961	mRNA	TOT_040000961	NC_025263.1	1089045	1089888	R	TOT_040000961	complement(join(<1089045..1089283,1089391..1089491,1089609..1089735,1089768..>1089888))	Theileria orientalis strain Shintoku	20716981
TOT_040000496	mRNA	TOT_040000496	NC_025263.1	1090529	1090832	D	TOT_040000496	join(<1090529..1090584,1090619..>1090832)	Theileria orientalis strain Shintoku	20716554
TOT_040000497	mRNA	TOT_040000497	NC_025263.1	1090986	1093459	R	TOT_040000497	complement(join(<1090986..1091155,1091186..1091321,1091433..1091555,1091646..1091772,1091806..1091899,1091972..1092113,1092157..1092201,1092692..1092844,1092880..1093090,1093122..>1093459))	Theileria orientalis strain Shintoku	20716555
TOT_040000498	mRNA	TOT_040000498	NC_025263.1	1093636	1094572	D	TOT_040000498	join(<1093636..1093812,1093845..1094020,1094065..>1094572)	Theileria orientalis strain Shintoku	20716556
TOT_040000905	mRNA	TOT_040000905	NC_025263.1	1095051	1097450	R	TOT_040000905	complement(join(<1095051..1096417,1096580..>1097450))	Theileria orientalis strain Shintoku	20716928
TOT_040000906	mRNA	TOT_040000906	NC_025263.1	1097850	1098704	R	TOT_040000906	complement(<1097850..>1098704)	Theileria orientalis strain Shintoku	20716929
TOT_040000907	mRNA	TOT_040000907	NC_025263.1	1098910	1099972	R	TOT_040000907	complement(join(<1098910..1099126,1099226..1099395,1099426..1099655,1099694..1099734,1099767..1099860,1099897..>1099972))	Theileria orientalis strain Shintoku	20716930
TOT_040000499	mRNA	TOT_040000499	NC_025263.1	1102011	1102525	R	TOT_040000499	complement(join(<1102011..1102369,1102399..>1102525))	Theileria orientalis strain Shintoku	20716557
TOT_040000500	mRNA	TOT_040000500	NC_025263.1	1103270	1107214	D	TOT_040000500	join(<1103270..1105690,1105703..>1107214)	Theileria orientalis strain Shintoku	20716558
TOT_040000501	mRNA	TOT_040000501	NC_025263.1	1108042	1110305	R	TOT_040000501	complement(join(<1108042..1110088,1110271..>1110305))	Theileria orientalis strain Shintoku	20716559
TOT_040000502	mRNA	TOT_040000502	NC_025263.1	1111169	1111492	D	TOT_040000502	<1111169..>1111492	Theileria orientalis strain Shintoku	20716560
TOT_040000503	mRNA	TOT_040000503	NC_025263.1	1112150	1112851	D	TOT_040000503	<1112150..>1112851	Theileria orientalis strain Shintoku	20716561
TOT_040000504	mRNA	TOT_040000504	NC_025263.1	1114183	1116939	D	TOT_040000504	join(<1114183..1114318,1114387..1114887,1114922..1115045,1115215..1115469,1115641..1115730,1115765..1115857,1116064..1116691,1116796..>1116939)	Theileria orientalis strain Shintoku	20716562
TOT_040000505	mRNA	TOT_040000505	NC_025263.1	1117182	1117901	R	TOT_040000505	complement(join(<1117182..1117644,1117828..>1117901))	Theileria orientalis strain Shintoku	20716563
TOT_040000506	mRNA	TOT_040000506	NC_025263.1	1118116	1120398	D	TOT_040000506	<1118116..>1120398	Theileria orientalis strain Shintoku	20716564
TOT_040000507	mRNA	TOT_040000507	NC_025263.1	1121017	1122360	D	TOT_040000507	join(<1121017..1121726,1121777..1122193,1122291..>1122360)	Theileria orientalis strain Shintoku	20716565
TOT_040000508	mRNA	TOT_040000508	NC_025263.1	1122616	1127613	D	TOT_040000508	join(<1122616..1122669,1122778..1122858,1122957..1123029,1123069..1125864,1125949..1126100,1126203..1126471,1126791..>1127613)	Theileria orientalis strain Shintoku	20716566
TOT_040000509	mRNA	TOT_040000509	NC_025263.1	1127701	1127835	R	TOT_040000509	complement(<1127701..>1127835)	Theileria orientalis strain Shintoku	20716567
TOT_040000962	mRNA	TOT_040000962	NC_025263.1	1128452	1129459	D	TOT_040000962	join(<1128452..1128891,1129048..1129301,1129338..>1129459)	Theileria orientalis strain Shintoku	20716982
TOT_040000511	mRNA	TOT_040000511	NC_025263.1	1129941	1131684	D	TOT_040000511	join(<1129941..1130240,1130344..1130637,1130718..1130881,1131141..>1131684)	Theileria orientalis strain Shintoku	20716568
TOT_040000512	mRNA	TOT_040000512	NC_025263.1	1131823	1133938	R	TOT_040000512	complement(join(<1131823..1131876,1132238..1132358,1132398..1132566,1132726..1132867,1132904..1132998,1133033..1133124,1133163..1133308,1133344..1133549,1133671..1133753,1133834..1133905,1133928..>1133938))	Theileria orientalis strain Shintoku	20716569
TOT_040000513	mRNA	TOT_040000513	NC_025263.1	1134540	1135112	D	TOT_040000513	join(<1134540..1134656,1134824..1134955,1134996..>1135112)	Theileria orientalis strain Shintoku	20716570
TOT_040000514	mRNA	TOT_040000514	NC_025263.1	1135512	1136475	D	TOT_040000514	join(<1135512..1135819,1135980..>1136475)	Theileria orientalis strain Shintoku	20716571
TOT_040000515	mRNA	TOT_040000515	NC_025263.1	1136912	1139634	R	TOT_040000515	complement(join(<1136912..1137272,1137441..1138378,1138541..1138935,1138994..1139140,1139280..1139342,1139422..1139512,1139599..>1139634))	Theileria orientalis strain Shintoku	20716572
TOT_040000516	mRNA	TOT_040000516	NC_025263.1	1139857	1140603	D	TOT_040000516	join(<1139857..1139969,1140034..1140259,1140553..>1140603)	Theileria orientalis strain Shintoku	20716573
TOT_040000517	mRNA	TOT_040000517	NC_025263.1	1140636	1141046	R	TOT_040000517	complement(<1140636..>1141046)	Theileria orientalis strain Shintoku	20716574
TOT_040000518	mRNA	TOT_040000518	NC_025263.1	1142292	1142675	D	TOT_040000518	<1142292..>1142675	Theileria orientalis strain Shintoku	20716575
TOT_040000519	mRNA	TOT_040000519	NC_025263.1	1143001	1146729	D	TOT_040000519	join(<1143001..1143065,1143303..1143455,1143524..1143962,1144161..1144864,1145036..1145439,1145483..1145662,1145774..1145957,1145989..1146193,1146292..1146431,1146462..>1146729)	Theileria orientalis strain Shintoku	20716576
TOT_040000520	mRNA	TOT_040000520	NC_025263.1	1147117	1148196	D	TOT_040000520	join(<1147117..1147524,1147558..1147639,1147696..1147817,1147847..1147970,1148027..>1148196)	Theileria orientalis strain Shintoku	20716577
TOT_040000521	mRNA	TOT_040000521	NC_025263.1	1148647	1150254	R	TOT_040000521	complement(join(<1148647..1148785,1148922..1149145,1149218..1149452,1149546..1149933,1150080..>1150254))	Theileria orientalis strain Shintoku	20716578
TOT_040000522	mRNA	TOT_040000522	NC_025263.1	1151010	1152050	D	TOT_040000522	join(<1151010..1151106,1151138..1151265,1151323..1151585,1151642..1151797,1151834..>1152050)	Theileria orientalis strain Shintoku	20716579
TOT_040000523	mRNA	TOT_040000523	NC_025263.1	1152375	1156762	R	TOT_040000523	complement(join(<1152375..1152517,1152557..1152839,1152900..1153268,1153363..1153441,1153675..1153980,1154098..1156448,1156700..>1156762))	Theileria orientalis strain Shintoku	20716580
TOT_040000524	mRNA	TOT_040000524	NC_025263.1	1156941	1158807	D	TOT_040000524	join(<1156941..1157054,1157085..1157172,1157252..1157415,1157448..1157885,1157980..1158177,1158253..1158380,1158462..1158649,1158680..>1158807)	Theileria orientalis strain Shintoku	20716581
TOT_040000525	mRNA	TOT_040000525	NC_025263.1	1158957	1160821	R	TOT_040000525	complement(join(<1158957..1160406,1160438..1160496,1160528..>1160821))	Theileria orientalis strain Shintoku	20716582
TOT_040000963	mRNA	TOT_040000963	NC_025263.1	1160821	1162811	R	TOT_040000963	complement(join(<1160821..1160910,1161122..1161442,1161502..1161645,1161809..1161885,1161918..1162068,1162113..1162448,1162509..>1162811))	Theileria orientalis strain Shintoku	20716983
TOT_040000527	mRNA	TOT_040000527	NC_025263.1	1163368	1167561	D	TOT_040000527	join(<1163368..1163452,1163488..1163727,1163771..1163969,1164002..1164275,1164306..1164500,1164624..1164774,1164813..1165713,1165813..1166753,1166827..1166875,1166918..1167113,1167145..1167446,1167480..>1167561)	Theileria orientalis strain Shintoku	20716583
TOT_040000528	mRNA	TOT_040000528	NC_025263.1	1167628	1169956	D	TOT_040000528	join(<1167628..1167850,1167892..1168091,1168146..1168354,1168480..1168655,1168687..1169117,1169149..1169439,1169494..1169655,1169725..1169797,1169829..>1169956)	Theileria orientalis strain Shintoku	20716584
TOT_040000529	mRNA	TOT_040000529	NC_025263.1	1170019	1172380	R	TOT_040000529	complement(join(<1170019..1170149,1170173..1170257,1170289..1170377,1170413..1170515,1170547..1170691,1170717..1170856,1170887..1171305,1171361..1171542,1171573..1171650,1171681..1171808,1171916..1172088,1172120..1172200,1172233..>1172380))	Theileria orientalis strain Shintoku	20716585
TOT_040000530	mRNA	TOT_040000530	NC_025263.1	1172715	1173637	D	TOT_040000530	join(<1172715..1172793,1172833..1173047,1173077..1173169,1173200..1173276,1173367..1173473,1173504..>1173637)	Theileria orientalis strain Shintoku	20716586
TOT_040000531	mRNA	TOT_040000531	NC_025263.1	1173673	1175878	R	TOT_040000531	complement(join(<1173673..1175489,1175521..>1175878))	Theileria orientalis strain Shintoku	20716587
TOT_040000532	mRNA	TOT_040000532	NC_025263.1	1176470	1181145	R	TOT_040000532	complement(join(<1176470..1177375,1177421..1177494,1177563..1177709,1177977..1178468,1178706..1179089,1179121..1179237,1179365..1179586,1179626..1179793,1179856..1180059,1180127..1180674,1180707..1180818,1180915..1181049,1181085..>1181145))	Theileria orientalis strain Shintoku	20716588
TOT_040000533	mRNA	TOT_040000533	NC_025263.1	1181405	1182118	D	TOT_040000533	<1181405..>1182118	Theileria orientalis strain Shintoku	20716589
TOT_040000534	mRNA	TOT_040000534	NC_025263.1	1182512	1183327	D	TOT_040000534	join(<1182512..1182681,1182713..1182830,1182860..1182938,1183023..1183186,1183217..>1183327)	Theileria orientalis strain Shintoku	20716590
TOT_040000535	mRNA	TOT_040000535	NC_025263.1	1183857	1186007	D	TOT_040000535	join(<1183857..1184886,1184939..1185137,1185536..>1186007)	Theileria orientalis strain Shintoku	20716591
TOT_040000536	mRNA	TOT_040000536	NC_025263.1	1186339	1191400	D	TOT_040000536	join(<1186339..1190694,1191098..>1191400)	Theileria orientalis strain Shintoku	20716592
TOT_040000537	mRNA	TOT_040000537	NC_025263.1	1191475	1193993	D	TOT_040000537	join(<1191475..1191799,1191831..1192119,1192220..1192372,1192423..1192585,1192629..1192724,1192812..1193122,1193331..1193811,1193892..>1193993)	Theileria orientalis strain Shintoku	20716593
TOT_040000538	mRNA	TOT_040000538	NC_025263.1	1194092	1194907	R	TOT_040000538	complement(<1194092..>1194907)	Theileria orientalis strain Shintoku	20716594
TOT_040000539	mRNA	TOT_040000539	NC_025263.1	1195266	1195740	D	TOT_040000539	join(<1195266..1195412,1195485..1195605,1195637..>1195740)	Theileria orientalis strain Shintoku	20716595
TOT_040000540	mRNA	TOT_040000540	NC_025263.1	1195825	1197954	R	TOT_040000540	complement(join(<1195825..1196090,1196130..1196286,1196503..1196868,1197001..1197141,1197174..1197204,1197406..1197572,1197610..>1197954))	Theileria orientalis strain Shintoku	20716596
TOT_040000541	mRNA	TOT_040000541	NC_025263.1	1198445	1199147	R	TOT_040000541	complement(join(<1198445..1198711,1198782..1198933,1198968..1199006,1199072..>1199147))	Theileria orientalis strain Shintoku	20716597
TOT_040000542	mRNA	TOT_040000542	NC_025263.1	1199369	1200389	D	TOT_040000542	join(<1199369..1199464,1199500..1199691,1199724..1199816,1199846..1199944,1199999..1200125,1200271..>1200389)	Theileria orientalis strain Shintoku	20716598
TOT_040000543	mRNA	TOT_040000543	NC_025263.1	1200399	1201851	R	TOT_040000543	complement(join(<1200399..1200506,1200517..>1201851))	Theileria orientalis strain Shintoku	20716599
TOT_040000544	mRNA	TOT_040000544	NC_025263.1	1202157	1211423	D	TOT_040000544	join(<1202157..1205955,1206799..1206815,1206840..1207210,1207331..1208846,1208985..1209973,1210319..>1211423)	Theileria orientalis strain Shintoku	20716600
TOT_040000545	mRNA	TOT_040000545	NC_025263.1	1211543	1214043	D	TOT_040000545	join(<1211543..1212841,1212883..1212922,1213067..1213480,1213539..1213889,1213952..>1214043)	Theileria orientalis strain Shintoku	20716601
TOT_040000546	mRNA	TOT_040000546	NC_025263.1	1214355	1216071	R	TOT_040000546	complement(join(<1214355..1215011,1215210..1215880,1215924..>1216071))	Theileria orientalis strain Shintoku	20716602
TOT_040000547	mRNA	TOT_040000547	NC_025263.1	1217020	1217457	D	TOT_040000547	join(<1217020..1217115,1217161..1217241,1217275..>1217457)	Theileria orientalis strain Shintoku	20716603
TOT_040000548	mRNA	TOT_040000548	NC_025263.1	1217909	1221322	D	TOT_040000548	join(<1217909..1218939,1218994..1220085,1220353..>1221322)	Theileria orientalis strain Shintoku	20716604
TOT_040000549	mRNA	TOT_040000549	NC_025263.1	1221552	1223415	D	TOT_040000549	join(<1221552..1221680,1221741..1221861,1221896..1221984,1222021..1222515,1222672..1222746,1222872..1223223,1223375..>1223415)	Theileria orientalis strain Shintoku	20716605
TOT_040000550	mRNA	TOT_040000550	NC_025263.1	1223523	1225092	R	TOT_040000550	complement(join(<1223523..1223672,1223771..1223881,1223961..1224419,1224452..1224566,1224596..1224726,1224790..1224939,1224979..>1225092))	Theileria orientalis strain Shintoku	20716606
TOT_040000551	mRNA	TOT_040000551	NC_025263.1	1225270	1226964	D	TOT_040000551	<1225270..>1226964	Theileria orientalis strain Shintoku	20716607
TOT_040000552	mRNA	TOT_040000552	NC_025263.1	1227409	1231244	D	TOT_040000552	join(<1227409..1227963,1228157..1228925,1228956..1229432,1229668..>1231244)	Theileria orientalis strain Shintoku	20716608
TOT_040000553	mRNA	TOT_040000553	NC_025263.1	1231768	1235607	R	TOT_040000553	complement(join(<1231768..1232421,1232616..1232947,1233043..1233319,1233359..1233634,1233711..1233869,1233966..1234088,1234153..1235118,1235179..>1235607))	Theileria orientalis strain Shintoku	20716609
TOT_040000554	mRNA	TOT_040000554	NC_025263.1	1235753	1238139	R	TOT_040000554	complement(join(<1235753..1236345,1236378..>1238139))	Theileria orientalis strain Shintoku	20716610
TOT_040000555	mRNA	TOT_040000555	NC_025263.1	1238543	1239591	D	TOT_040000555	join(<1238543..1238618,1238659..1238771,1238835..1238916,1238960..1239115,1239155..1239237,1239271..>1239591)	Theileria orientalis strain Shintoku	20716611
TOT_040000556	mRNA	TOT_040000556	NC_025263.1	1239886	1241568	R	TOT_040000556	complement(join(<1239886..1239948,1239985..1240118,1240161..1240296,1240463..1240790,1240856..1240945,1240975..1241042,1241077..>1241568))	Theileria orientalis strain Shintoku	20716612
TOT_040000557	mRNA	TOT_040000557	NC_025263.1	1241780	1242913	R	TOT_040000557	complement(join(<1241780..1241824,1241855..1242132,1242164..1242376,1242466..1242529,1242560..>1242913))	Theileria orientalis strain Shintoku	20716613
TOT_040000558	mRNA	TOT_040000558	NC_025263.1	1243415	1247542	D	TOT_040000558	join(<1243415..1243627,1243658..1243760,1243791..1244842,1245218..>1247542)	Theileria orientalis strain Shintoku	20716614
TOT_040000559	mRNA	TOT_040000559	NC_025263.1	1247597	1247932	D	TOT_040000559	<1247597..>1247932	Theileria orientalis strain Shintoku	20716615
TOT_040000560	mRNA	TOT_040000560	NC_025263.1	1248290	1253905	D	TOT_040000560	join(<1248290..1251097,1251173..1251606,1251655..1252084,1252121..1252127,1252191..1252415,1252470..>1253905)	Theileria orientalis strain Shintoku	20716616
TOT_040000561	mRNA	TOT_040000561	NC_025263.1	1253961	1254762	D	TOT_040000561	join(<1253961..1254047,1254081..1254380,1254529..>1254762)	Theileria orientalis strain Shintoku	20716617
TOT_040000562	mRNA	TOT_040000562	NC_025263.1	1255059	1257011	R	TOT_040000562	complement(join(<1255059..1255993,1256120..1256128,1256279..>1257011))	Theileria orientalis strain Shintoku	20716618
TOT_040000563	mRNA	TOT_040000563	NC_025263.1	1257622	1259397	D	TOT_040000563	join(<1257622..1258215,1258387..>1259397)	Theileria orientalis strain Shintoku	20716619
TOT_040000564	mRNA	TOT_040000564	NC_025263.1	1259716	1261430	R	TOT_040000564	complement(join(<1259716..1259764,1260094..1260470,1260573..1260679,1260721..1260778,1260813..1260938,1260967..1261020,1261053..1261130,1261162..1261244,1261280..>1261430))	Theileria orientalis strain Shintoku	20716620
TOT_040000964	mRNA	TOT_040000964	NC_025263.1	1261631	1262545	D	TOT_040000964	<1261631..>1262545	Theileria orientalis strain Shintoku	20716984
TOT_040000566	mRNA	TOT_040000566	NC_025263.1	1262636	1268161	R	TOT_040000566	complement(join(<1262636..1262785,1262816..1262901,1263047..1263219,1263300..1263449,1263520..1263665,1263758..1264053,1264155..1264242,1264277..>1268161))	Theileria orientalis strain Shintoku	20716621
TOT_040000567	mRNA	TOT_040000567	NC_025263.1	1268257	1268750	D	TOT_040000567	join(<1268257..1268326,1268590..>1268750)	Theileria orientalis strain Shintoku	20716622
TOT_040000568	mRNA	TOT_040000568	NC_025263.1	1268952	1269617	D	TOT_040000568	join(<1268952..1269008,1269047..1269261,1269293..>1269617)	Theileria orientalis strain Shintoku	20716623
TOT_040000569	mRNA	TOT_040000569	NC_025263.1	1269705	1270786	R	TOT_040000569	complement(join(<1269705..1270600,1270639..>1270786))	Theileria orientalis strain Shintoku	20716624
TOT_040000570	mRNA	TOT_040000570	NC_025263.1	1271000	1274346	D	TOT_040000570	join(<1271000..1271033,1271103..1271248,1271305..1271394,1271428..1272357,1272466..1273991,1274151..>1274346)	Theileria orientalis strain Shintoku	20716625
TOT_040000571	mRNA	TOT_040000571	NC_025263.1	1274697	1275716	R	TOT_040000571	complement(<1274697..>1275716)	Theileria orientalis strain Shintoku	20716626
TOT_040000572	mRNA	TOT_040000572	NC_025263.1	1276336	1277593	R	TOT_040000572	complement(join(<1276336..1277451,1277519..>1277593))	Theileria orientalis strain Shintoku	20716627
TOT_040000573	mRNA	TOT_040000573	NC_025263.1	1278395	1279174	D	TOT_040000573	<1278395..>1279174	Theileria orientalis strain Shintoku	20716628
TOT_040000574	mRNA	TOT_040000574	NC_025263.1	1279582	1280988	R	TOT_040000574	complement(join(<1279582..1279824,1279864..1279941,1280169..1280255,1280286..1280698,1280850..>1280988))	Theileria orientalis strain Shintoku	20716629
TOT_040000575	mRNA	TOT_040000575	NC_025263.1	1281095	1281878	R	TOT_040000575	complement(join(<1281095..1281271,1281343..1281620,1281653..1281791,1281867..>1281878))	Theileria orientalis strain Shintoku	20716630
TOT_040000576	mRNA	TOT_040000576	NC_025263.1	1282380	1286307	D	TOT_040000576	join(<1282380..1284568,1284719..1285646,1285861..>1286307)	Theileria orientalis strain Shintoku	20716631
TOT_040000577	mRNA	TOT_040000577	NC_025263.1	1286531	1290021	R	TOT_040000577	complement(join(<1286531..1286702,1286845..1287265,1287360..1287523,1287711..1288311,1288344..1288435,1288548..1288641,1288695..1288826,1288901..1289030,1289392..1289501,1289562..1289648,1289703..1289718,1289749..>1290021))	Theileria orientalis strain Shintoku	20716632
TOT_040000578	mRNA	TOT_040000578	NC_025263.1	1290274	1290819	D	TOT_040000578	<1290274..>1290819	Theileria orientalis strain Shintoku	20716633
TOT_040000579	mRNA	TOT_040000579	NC_025263.1	1291000	1291371	D	TOT_040000579	<1291000..>1291371	Theileria orientalis strain Shintoku	20716634
TOT_040000580	mRNA	TOT_040000580	NC_025263.1	1291664	1292571	R	TOT_040000580	complement(join(<1291664..1291852,1292103..1292182,1292271..1292429,1292499..>1292571))	Theileria orientalis strain Shintoku	20716635
TOT_040000581	mRNA	TOT_040000581	NC_025263.1	1294339	1295544	D	TOT_040000581	<1294339..>1295544	Theileria orientalis strain Shintoku	20716636
TOT_040000582	mRNA	TOT_040000582	NC_025263.1	1295817	1297059	D	TOT_040000582	join(<1295817..1295869,1295902..1296009,1296121..1296190,1296427..1296568,1296601..1296707,1296789..1296897,1296986..>1297059)	Theileria orientalis strain Shintoku	20716637
TOT_040000583	mRNA	TOT_040000583	NC_025263.1	1297234	1298721	R	TOT_040000583	complement(<1297234..>1298721)	Theileria orientalis strain Shintoku	20716638
TOT_040000965	mRNA	TOT_040000965	NC_025263.1	1299182	1300067	R	TOT_040000965	complement(join(<1299182..1299468,1299544..1299724,1299756..>1300067))	Theileria orientalis strain Shintoku	20716985
TOT_040000585	mRNA	TOT_040000585	NC_025263.1	1300632	1305271	D	TOT_040000585	join(<1300632..1300801,1300954..1301042,1301111..1301217,1301297..1301440,1301495..1301671,1301760..1301951,1302068..1302285,1302512..1302802,1302837..1303053,1303379..1304199,1304466..1304709,1304888..>1305271)	Theileria orientalis strain Shintoku	20716639
TOT_040000586	mRNA	TOT_040000586	NC_025263.1	1305480	1306811	D	TOT_040000586	<1305480..>1306811	Theileria orientalis strain Shintoku	20716640
TOT_040000587	mRNA	TOT_040000587	NC_025263.1	1306814	1306957	R	TOT_040000587	complement(<1306814..>1306957)	Theileria orientalis strain Shintoku	20716641
TOT_040000588	mRNA	TOT_040000588	NC_025263.1	1307033	1307788	D	TOT_040000588	join(<1307033..1307095,1307178..1307331,1307451..>1307788)	Theileria orientalis strain Shintoku	20716642
TOT_040000589	mRNA	TOT_040000589	NC_025263.1	1308102	1308713	D	TOT_040000589	join(<1308102..1308234,1308351..1308550,1308612..>1308713)	Theileria orientalis strain Shintoku	20716643
TOT_040000590	mRNA	TOT_040000590	NC_025263.1	1309052	1310139	R	TOT_040000590	complement(join(<1309052..1309438,1309510..1309746,1309786..>1310139))	Theileria orientalis strain Shintoku	20716644
TOT_040000591	mRNA	TOT_040000591	NC_025263.1	1310348	1312451	R	TOT_040000591	complement(join(<1310348..1310445,1310477..1311628,1311719..1312264,1312382..>1312451))	Theileria orientalis strain Shintoku	20716645
TOT_040000592	mRNA	TOT_040000592	NC_025263.1	1312969	1313673	R	TOT_040000592	complement(<1312969..>1313673)	Theileria orientalis strain Shintoku	20716646
TOT_040000593	mRNA	TOT_040000593	NC_025263.1	1313993	1317587	R	TOT_040000593	complement(join(<1313993..1314119,1314237..1314280,1314369..1314475,1314588..1317332,1317536..>1317587))	Theileria orientalis strain Shintoku	20716647
TOT_040000594	mRNA	TOT_040000594	NC_025263.1	1318208	1318635	D	TOT_040000594	join(<1318208..1318210,1318302..1318466,1318501..>1318635)	Theileria orientalis strain Shintoku	20716648
TOT_040000595	mRNA	TOT_040000595	NC_025263.1	1318671	1319661	R	TOT_040000595	complement(join(<1318671..1318779,1318845..1318954,1319089..1319195,1319298..1319405,1319652..>1319661))	Theileria orientalis strain Shintoku	20716649
TOT_040000596	mRNA	TOT_040000596	NC_025263.1	1319665	1321622	D	TOT_040000596	join(<1319665..1320262,1320410..1320625,1320768..1320923,1320999..1321224,1321375..1321438,1321491..>1321622)	Theileria orientalis strain Shintoku	20716650
TOT_040000966	mRNA	TOT_040000966	NC_025263.1	1321951	1322582	D	TOT_040000966	join(<1321951..1322019,1322103..1322204,1322267..1322426,1322467..>1322582)	Theileria orientalis strain Shintoku	20716986
TOT_040000598	mRNA	TOT_040000598	NC_025263.1	1322878	1323432	R	TOT_040000598	complement(<1322878..>1323432)	Theileria orientalis strain Shintoku	20716651
TOT_040000599	mRNA	TOT_040000599	NC_025263.1	1324161	1325606	R	TOT_040000599	complement(<1324161..>1325606)	Theileria orientalis strain Shintoku	20716652
TOT_040000600	mRNA	TOT_040000600	NC_025263.1	1326512	1327697	D	TOT_040000600	join(<1326512..1326667,1326760..1326867,1326976..1327059,1327130..1327223,1327294..1327358,1327465..1327560,1327659..>1327697)	Theileria orientalis strain Shintoku	20716653
TOT_040000601	mRNA	TOT_040000601	NC_025263.1	1327859	1328488	D	TOT_040000601	<1327859..>1328488	Theileria orientalis strain Shintoku	20716654
TOT_040000602	mRNA	TOT_040000602	NC_025263.1	1328666	1329118	R	TOT_040000602	complement(join(<1328666..1328754,1328856..1328918,1328998..>1329118))	Theileria orientalis strain Shintoku	20716655
TOT_040000603	mRNA	TOT_040000603	NC_025263.1	1329356	1332121	R	TOT_040000603	complement(<1329356..>1332121)	Theileria orientalis strain Shintoku	20716656
TOT_040000604	mRNA	TOT_040000604	NC_025263.1	1332655	1332919	R	TOT_040000604	complement(join(<1332655..1332733,1332765..1332822,1332856..>1332919))	Theileria orientalis strain Shintoku	20716657
TOT_040000605	mRNA	TOT_040000605	NC_025263.1	1333051	1335909	R	TOT_040000605	complement(join(<1333051..1334093,1334301..1334838,1334925..1335656,1335862..>1335909))	Theileria orientalis strain Shintoku	20716658
TOT_040000606	mRNA	TOT_040000606	NC_025263.1	1336221	1337288	D	TOT_040000606	<1336221..>1337288	Theileria orientalis strain Shintoku	20716659
TOT_040000607	mRNA	TOT_040000607	NC_025263.1	1337460	1338788	D	TOT_040000607	join(<1337460..1338300,1338357..1338497,1338670..>1338788)	Theileria orientalis strain Shintoku	20716660
TOT_040000608	mRNA	TOT_040000608	NC_025263.1	1339212	1340892	R	TOT_040000608	complement(join(<1339212..1339308,1339393..1339649,1339843..1339983,1340078..1340169,1340201..1340264,1340301..1340441,1340505..1340593,1340631..>1340892))	Theileria orientalis strain Shintoku	20716661
TOT_040000609	mRNA	TOT_040000609	NC_025263.1	1341830	1342468	D	TOT_040000609	<1341830..>1342468	Theileria orientalis strain Shintoku	20716662
TOT_040000610	mRNA	TOT_040000610	NC_025263.1	1342495	1342614	R	TOT_040000610	complement(<1342495..>1342614)	Theileria orientalis strain Shintoku	20716663
TOT_040000611	mRNA	TOT_040000611	NC_025263.1	1342638	1344094	R	TOT_040000611	complement(join(<1342638..1342883,1342947..1343129,1343192..1343440,1343528..1343699,1343769..>1344094))	Theileria orientalis strain Shintoku	20716664
TOT_040000612	mRNA	TOT_040000612	NC_025263.1	1344178	1345363	R	TOT_040000612	complement(join(<1344178..1344426,1344458..1344544,1344576..1344731,1344762..1344896,1344926..1345025,1345055..1345185,1345229..>1345363))	Theileria orientalis strain Shintoku	20716665
TOT_040000613	mRNA	TOT_040000613	NC_025263.1	1345741	1347172	R	TOT_040000613	complement(join(<1345741..1346172,1346372..1346793,1347031..>1347172))	Theileria orientalis strain Shintoku	20716666
TOT_040000614	mRNA	TOT_040000614	NC_025263.1	1347925	1351910	R	TOT_040000614	complement(join(<1347925..1349724,1349901..1351560,1351591..>1351910))	Theileria orientalis strain Shintoku	20716667
TOT_040000615	mRNA	TOT_040000615	NC_025263.1	1352319	1353937	D	TOT_040000615	join(<1352319..1353155,1353194..1353259,1353297..1353383,1353414..1353526,1353558..1353619,1353737..1353819,1353854..>1353937)	Theileria orientalis strain Shintoku	20716668
TOT_040000616	mRNA	TOT_040000616	NC_025263.1	1354130	1358683	R	TOT_040000616	complement(join(<1354130..1358039,1358154..>1358683))	Theileria orientalis strain Shintoku	20716669
TOT_040000617	mRNA	TOT_040000617	NC_025263.1	1359229	1363767	R	TOT_040000617	complement(<1359229..>1363767)	Theileria orientalis strain Shintoku	20716670
TOT_040000618	mRNA	TOT_040000618	NC_025263.1	1364123	1366389	D	TOT_040000618	join(<1364123..1364143,1364225..1364289,1364324..1364512,1364639..1364681,1364758..1364892,1364908..1364973,1365128..1365395,1365533..1365690,1365807..1365933,1366124..>1366389)	Theileria orientalis strain Shintoku	20716671
TOT_040000619	mRNA	TOT_040000619	NC_025263.1	1366578	1368568	D	TOT_040000619	join(<1366578..1366983,1367014..1367096,1367268..1367432,1367581..1367815,1367883..1367946,1367982..1368081,1368111..1368200,1368235..1368303,1368335..1368423,1368454..>1368568)	Theileria orientalis strain Shintoku	20716672
TOT_040000620	mRNA	TOT_040000620	NC_025263.1	1368963	1370566	D	TOT_040000620	join(<1368963..1369116,1369148..1369278,1369458..1369625,1369773..1369856,1369886..1369990,1370156..1370278,1370309..>1370566)	Theileria orientalis strain Shintoku	20716673
TOT_040000621	mRNA	TOT_040000621	NC_025263.1	1370921	1371454	D	TOT_040000621	join(<1370921..1370957,1370994..>1371454)	Theileria orientalis strain Shintoku	20716674
TOT_040000622	mRNA	TOT_040000622	NC_025263.1	1371603	1377489	D	TOT_040000622	join(<1371603..1371796,1371877..1371949,1371979..1372076,1372114..1372171,1372262..1372426,1372558..1372643,1372678..1372839,1372870..1372958,1372991..1373163,1373196..1373264,1373433..1374617,1374778..1374931,1374976..1375331,1375533..1376164,1376264..1376459,1376613..1376777,1376812..1376883,1376987..1377145,1377225..1377317,1377358..>1377489)	Theileria orientalis strain Shintoku	20716675
TOT_040000623	mRNA	TOT_040000623	NC_025263.1	1377552	1378397	D	TOT_040000623	<1377552..>1378397	Theileria orientalis strain Shintoku	20716676
TOT_040000624	mRNA	TOT_040000624	NC_025263.1	1378489	1380010	R	TOT_040000624	complement(join(<1378489..1378683,1378713..1378785,1378871..1378968,1379035..1379117,1379164..1379299,1379433..1379561,1379594..>1380010))	Theileria orientalis strain Shintoku	20716677
TOT_040000625	mRNA	TOT_040000625	NC_025263.1	1380963	1381537	D	TOT_040000625	join(<1380963..1381128,1381170..1381347,1381432..>1381537)	Theileria orientalis strain Shintoku	20716678
TOT_040000626	mRNA	TOT_040000626	NC_025263.1	1382583	1390780	D	TOT_040000626	join(<1382583..1382790,1382808..1382881,1382914..1383255,1383342..1383608,1383641..>1390780)	Theileria orientalis strain Shintoku	20716679
TOT_040000627	mRNA	TOT_040000627	NC_025263.1	1391013	1391264	D	TOT_040000627	<1391013..>1391264	Theileria orientalis strain Shintoku	20716680
TOT_040000628	mRNA	TOT_040000628	NC_025263.1	1392007	1393068	D	TOT_040000628	<1392007..>1393068	Theileria orientalis strain Shintoku	20716681
TOT_040000967	mRNA	TOT_040000967	NC_025263.1	1394263	1395151	R	TOT_040000967	complement(join(<1394263..1394522,1394555..1394668,1394700..1394764,1394794..1394921,1395002..>1395151))	Theileria orientalis strain Shintoku	20716987
TOT_040000630	mRNA	TOT_040000630	NC_025263.1	1395452	1396344	D	TOT_040000630	join(<1395452..1395521,1395557..>1396344)	Theileria orientalis strain Shintoku	20716682
TOT_040000968	mRNA	TOT_040000968	NC_025263.1	1397373	1398938	D	TOT_040000968	<1397373..>1398938	Theileria orientalis strain Shintoku	20716988
TOT_040000969	mRNA	TOT_040000969	NC_025263.1	1399494	1400347	D	TOT_040000969	join(<1399494..1399550,1399586..>1400347)	Theileria orientalis strain Shintoku	20716989
TOT_040000632	mRNA	TOT_040000632	NC_025263.1	1400735	1404419	R	TOT_040000632	complement(join(<1400735..1400851,1401085..1401376,1401718..1401842,1401928..1402065,1402233..1402330,1402532..1402679,1402766..1402881,1403172..1404077,1404178..1404267,1404299..>1404419))	Theileria orientalis strain Shintoku	20716683
TOT_040000633	mRNA	TOT_040000633	NC_025263.1	1405169	1406427	D	TOT_040000633	join(<1405169..1405231,1405266..1405459,1405491..1405654,1405779..1405855,1405887..1406090,1406132..1406274,1406325..>1406427)	Theileria orientalis strain Shintoku	20716684
TOT_040000634	mRNA	TOT_040000634	NC_025263.1	1406783	1407190	R	TOT_040000634	complement(<1406783..>1407190)	Theileria orientalis strain Shintoku	20716685
TOT_040000635	mRNA	TOT_040000635	NC_025263.1	1407613	1407813	R	TOT_040000635	complement(join(<1407613..1407773,1407807..>1407813))	Theileria orientalis strain Shintoku	20716686
TOT_040000636	mRNA	TOT_040000636	NC_025263.1	1407901	1410834	R	TOT_040000636	complement(join(<1407901..1408085,1408118..1408378,1408434..1408749,1408789..1408993,1409028..1409147,1409178..1409294,1409536..1409624,1409656..1409835,1409876..1410015,1410047..1410440,1410473..1410598,1410637..>1410834))	Theileria orientalis strain Shintoku	20716687
TOT_040000637	mRNA	TOT_040000637	NC_025263.1	1410893	1413158	D	TOT_040000637	join(<1410893..1410968,1411158..1411305,1411392..1411624,1411655..1411773,1411805..1411882,1411914..>1413158)	Theileria orientalis strain Shintoku	20716688
TOT_040000638	mRNA	TOT_040000638	NC_025263.1	1413477	1415699	R	TOT_040000638	complement(join(<1413477..1415130,1415176..1415571,1415647..>1415699))	Theileria orientalis strain Shintoku	20716689
TOT_040000639	mRNA	TOT_040000639	NC_025263.1	1416244	1416396	D	TOT_040000639	<1416244..>1416396	Theileria orientalis strain Shintoku	20716690
TOT_040000640	mRNA	TOT_040000640	NC_025263.1	1417138	1418104	D	TOT_040000640	join(<1417138..1417258,1417291..1417385,1417417..1417748,1417813..1417843,1417922..>1418104)	Theileria orientalis strain Shintoku	20716691
TOT_040000641	mRNA	TOT_040000641	NC_025263.1	1418118	1418384	R	TOT_040000641	complement(<1418118..>1418384)	Theileria orientalis strain Shintoku	20716692
TOT_040000642	mRNA	TOT_040000642	NC_025263.1	1418886	1421438	D	TOT_040000642	join(<1418886..1418987,1419026..1420780,1420945..1421040,1421072..1421170,1421310..>1421438)	Theileria orientalis strain Shintoku	20716693
TOT_040000643	mRNA	TOT_040000643	NC_025263.1	1421765	1422540	R	TOT_040000643	complement(join(<1421765..1421839,1421916..1422002,1422014..1422240,1422246..1422447,1422454..>1422540))	Theileria orientalis strain Shintoku	20716694
TOT_040000644	mRNA	TOT_040000644	NC_025263.1	1423449	1427087	D	TOT_040000644	join(<1423449..1423558,1423611..1425500,1425654..1426209,1426429..1426728,1426944..>1427087)	Theileria orientalis strain Shintoku	20716695
TOT_040000645	mRNA	TOT_040000645	NC_025263.1	1427338	1428072	R	TOT_040000645	complement(join(<1427338..1427485,1427515..1427588,1427620..1427726,1427763..1427824,1427855..1427946,1427986..>1428072))	Theileria orientalis strain Shintoku	20716696
TOT_040000646	mRNA	TOT_040000646	NC_025263.1	1428827	1430326	D	TOT_040000646	<1428827..>1430326	Theileria orientalis strain Shintoku	20716697
TOT_040000647	mRNA	TOT_040000647	NC_025263.1	1430439	1431258	R	TOT_040000647	complement(join(<1430439..1430892,1430924..1431125,1431219..>1431258))	Theileria orientalis strain Shintoku	20716698
TOT_040000648	mRNA	TOT_040000648	NC_025263.1	1431588	1433109	D	TOT_040000648	join(<1431588..1431951,1431990..1432627,1432701..1432850,1432936..>1433109)	Theileria orientalis strain Shintoku	20716699
TOT_040000649	mRNA	TOT_040000649	NC_025263.1	1433219	1436186	R	TOT_040000649	complement(join(<1433219..1433296,1433457..1433702,1433847..1434109,1434179..1434454,1434647..1435620,1435816..1435880,1435938..>1436186))	Theileria orientalis strain Shintoku	20716700
TOT_040000650	mRNA	TOT_040000650	NC_025263.1	1436377	1438481	R	TOT_040000650	complement(join(<1436377..1436476,1436509..1437085,1437195..1437296,1437328..1437404,1437440..1437504,1437600..>1438481))	Theileria orientalis strain Shintoku	20716701
TOT_040000651	mRNA	TOT_040000651	NC_025263.1	1439001	1441211	D	TOT_040000651	join(<1439001..1439033,1439103..1439176,1439208..1439334,1439364..1439525,1439556..1439644,1439674..1439778,1439809..1439892,1439984..1440159,1440192..1440423,1440564..1440780,1440890..1441051,1441086..>1441211)	Theileria orientalis strain Shintoku	20716702
TOT_040000652	mRNA	TOT_040000652	NC_025263.1	1441573	1444422	R	TOT_040000652	complement(<1441573..>1444422)	Theileria orientalis strain Shintoku	20716703
TOT_040000653	mRNA	TOT_040000653	NC_025263.1	1444625	1447654	D	TOT_040000653	join(<1444625..1444628,1444679..1444784,1445572..1446718,1446748..1447092,1447127..1447189,1447220..1447491,1447525..>1447654)	Theileria orientalis strain Shintoku	20716704
TOT_040000654	mRNA	TOT_040000654	NC_025263.1	1447669	1448477	D	TOT_040000654	join(<1447669..1447831,1447873..1448110,1448216..1448297,1448331..>1448477)	Theileria orientalis strain Shintoku	20716705
TOT_040000655	mRNA	TOT_040000655	NC_025263.1	1448583	1449045	R	TOT_040000655	complement(join(<1448583..1448780,1448905..>1449045))	Theileria orientalis strain Shintoku	20716706
TOT_040000656	mRNA	TOT_040000656	NC_025263.1	1449101	1450011	R	TOT_040000656	complement(join(<1449101..1449594,1449993..>1450011))	Theileria orientalis strain Shintoku	20716707
TOT_040000657	mRNA	TOT_040000657	NC_025263.1	1450785	1455023	D	TOT_040000657	join(<1450785..1451919,1452022..1454304,1454554..>1455023)	Theileria orientalis strain Shintoku	20716708
TOT_040000658	mRNA	TOT_040000658	NC_025263.1	1455646	1456095	R	TOT_040000658	complement(<1455646..>1456095)	Theileria orientalis strain Shintoku	20716709
TOT_040000659	mRNA	TOT_040000659	NC_025263.1	1456217	1456566	D	TOT_040000659	join(<1456217..1456296,1456381..1456460,1456511..>1456566)	Theileria orientalis strain Shintoku	20716710
TOT_040000660	mRNA	TOT_040000660	NC_025263.1	1456897	1459463	D	TOT_040000660	join(<1456897..1457102,1457189..1457342,1457449..1457661,1457740..1457895,1458238..1458411,1458969..1459074,1459339..>1459463)	Theileria orientalis strain Shintoku	20716711
TOT_040000661	mRNA	TOT_040000661	NC_025263.1	1460095	1460475	D	TOT_040000661	join(<1460095..1460143,1460177..>1460475)	Theileria orientalis strain Shintoku	20716712
TOT_040000662	mRNA	TOT_040000662	NC_025263.1	1460582	1461234	D	TOT_040000662	join(<1460582..1460648,1460692..1460799,1460832..1460909,1460948..>1461234)	Theileria orientalis strain Shintoku	20716713
TOT_040000663	mRNA	TOT_040000663	NC_025263.1	1461555	1462831	R	TOT_040000663	complement(join(<1461555..1461776,1461806..1461928,1462088..1462170,1462203..1462299,1462333..1462464,1462562..>1462831))	Theileria orientalis strain Shintoku	20716714
TOT_040000970	mRNA	TOT_040000970	NC_025263.1	1462942	1464025	D	TOT_040000970	join(<1462942..1463085,1463179..1463266,1463304..1463448,1463480..1463582,1463613..1463725,1463844..1463874,1463903..1463974,1464005..>1464025)	Theileria orientalis strain Shintoku	20716990
TOT_040000971	mRNA	TOT_040000971	NC_025263.1	1464334	1465221	R	TOT_040000971	complement(<1464334..>1465221)	Theileria orientalis strain Shintoku	20716991
TOT_040000666	mRNA	TOT_040000666	NC_025263.1	1465626	1466627	R	TOT_040000666	complement(<1465626..>1466627)	Theileria orientalis strain Shintoku	20716715
TOT_040000667	mRNA	TOT_040000667	NC_025263.1	1466741	1469856	R	TOT_040000667	complement(join(<1466741..1467742,1468142..1468210,1468243..>1469856))	Theileria orientalis strain Shintoku	20716716
TOT_040000668	mRNA	TOT_040000668	NC_025263.1	1470090	1474353	D	TOT_040000668	join(<1470090..1470146,1470188..1470278,1470318..1470464,1470498..1470577,1470608..1470720,1470772..1471203,1471258..1471407,1471447..1471885,1471967..1472001,1472016..1473135,1473220..>1474353)	Theileria orientalis strain Shintoku	20716717
TOT_040000669	mRNA	TOT_040000669	NC_025263.1	1474758	1476180	R	TOT_040000669	complement(join(<1474758..1474939,1475043..1475177,1475280..1475562,1475705..1475997,1476042..>1476180))	Theileria orientalis strain Shintoku	20716718
TOT_040000670	mRNA	TOT_040000670	NC_025263.1	1476286	1478216	R	TOT_040000670	complement(join(<1476286..1476345,1476378..1476449,1476633..1476782,1476840..1476967,1477060..1477393,1477498..1477694,1477766..>1478216))	Theileria orientalis strain Shintoku	20716719
TOT_040000671	mRNA	TOT_040000671	NC_025263.1	1478472	1478669	D	TOT_040000671	<1478472..>1478669	Theileria orientalis strain Shintoku	20716720
TOT_040000672	mRNA	TOT_040000672	NC_025263.1	1478756	1482271	R	TOT_040000672	complement(join(<1478756..1479987,1480087..1480599,1480911..1480960,1480990..1481255,1481477..1481592,1481623..1481768,1481809..1481903,1481987..>1482271))	Theileria orientalis strain Shintoku	20716721
TOT_040000673	mRNA	TOT_040000673	NC_025263.1	1482356	1482502	R	TOT_040000673	complement(join(<1482356..1482429,1482442..>1482502))	Theileria orientalis strain Shintoku	20716722
TOT_040000674	mRNA	TOT_040000674	NC_025263.1	1482521	1483065	R	TOT_040000674	complement(join(<1482521..1482551,1482584..1482879,1482973..>1483065))	Theileria orientalis strain Shintoku	20716723
TOT_040000675	mRNA	TOT_040000675	NC_025263.1	1483125	1483612	D	TOT_040000675	join(<1483125..1483145,1483207..1483411,1483434..>1483612)	Theileria orientalis strain Shintoku	20716724
TOT_040000676	mRNA	TOT_040000676	NC_025263.1	1483892	1490535	R	TOT_040000676	complement(join(<1483892..1484330,1484562..1485055,1485635..1486701,1486957..1487193,1487346..1490319,1490425..>1490535))	Theileria orientalis strain Shintoku	20716725
TOT_040000972	mRNA	TOT_040000972	NC_025263.1	1490799	1493621	D	TOT_040000972	join(<1490799..1491567,1491667..1492027,1492250..1493118,1493341..>1493621)	Theileria orientalis strain Shintoku	20716992
TOT_040000973	mRNA	TOT_040000973	NC_025263.1	1493818	1494378	D	TOT_040000973	join(<1493818..1493849,1493888..1494006,1494089..>1494378)	Theileria orientalis strain Shintoku	20716993
TOT_040000678	mRNA	TOT_040000678	NC_025263.1	1494587	1496887	R	TOT_040000678	complement(join(<1494587..1495195,1495316..1496245,1496378..1496660,1496748..>1496887))	Theileria orientalis strain Shintoku	20716726
TOT_040000679	mRNA	TOT_040000679	NC_025263.1	1497566	1498642	D	TOT_040000679	<1497566..>1498642	Theileria orientalis strain Shintoku	20716727
TOT_040000680	mRNA	TOT_040000680	NC_025263.1	1499268	1499906	D	TOT_040000680	join(<1499268..1499757,1499836..>1499906)	Theileria orientalis strain Shintoku	20716728
TOT_040000974	mRNA	TOT_040000974	NC_025263.1	1500149	1501203	R	TOT_040000974	complement(join(<1500149..1500723,1500754..1500901,1501000..>1501203))	Theileria orientalis strain Shintoku	20716994
TOT_040000682	mRNA	TOT_040000682	NC_025263.1	1502259	1504595	D	TOT_040000682	join(<1502259..1502417,1502453..1503022,1503189..>1504595)	Theileria orientalis strain Shintoku	20716729
TOT_040000683	mRNA	TOT_040000683	NC_025263.1	1505191	1508366	R	TOT_040000683	complement(join(<1505191..1507205,1507469..>1508366))	Theileria orientalis strain Shintoku	20716730
TOT_040000684	mRNA	TOT_040000684	NC_025263.1	1509455	1509858	D	TOT_040000684	join(<1509455..1509482,1509659..>1509858)	Theileria orientalis strain Shintoku	20716731
TOT_040000685	mRNA	TOT_040000685	NC_025263.1	1510080	1514560	R	TOT_040000685	complement(join(<1510080..1510243,1510327..1510414,1510472..1510532,1510609..1512146,1512192..1514369,1514507..>1514560))	Theileria orientalis strain Shintoku	20716732
TOT_040000686	mRNA	TOT_040000686	NC_025263.1	1515364	1516701	D	TOT_040000686	join(<1515364..1515409,1515505..1515600,1515630..1515782,1515867..1516013,1516142..1516194,1516234..1516345,1516451..>1516701)	Theileria orientalis strain Shintoku	20716733
TOT_040000687	mRNA	TOT_040000687	NC_025263.1	1516806	1522163	R	TOT_040000687	complement(join(<1516806..1517006,1517232..1517405,1517532..1517815,1517975..1518395,1518576..1518849,1518991..1519166,1519473..>1522163))	Theileria orientalis strain Shintoku	20716734
TOT_040000688	mRNA	TOT_040000688	NC_025263.1	1522582	1525740	D	TOT_040000688	<1522582..>1525740	Theileria orientalis strain Shintoku	20716735
TOT_040000689	mRNA	TOT_040000689	NC_025263.1	1526053	1531584	R	TOT_040000689	complement(join(<1526053..1526130,1526273..1526398,1526573..1527017,1527205..1527460,1527681..1528078,1528151..>1531584))	Theileria orientalis strain Shintoku	20716736
TOT_040000690	mRNA	TOT_040000690	NC_025263.1	1531926	1533467	R	TOT_040000690	complement(join(<1531926..1532043,1532080..1532191,1532221..1532478,1532502..1532547,1532578..1532802,1532842..1533220,1533274..>1533467))	Theileria orientalis strain Shintoku	20716737
TOT_040000691	mRNA	TOT_040000691	NC_025263.1	1534113	1540200	D	TOT_040000691	join(<1534113..1534203,1534232..1534436,1534473..1534651,1534682..1534753,1534786..1534949,1534987..1535092,1535124..1535703,1535745..1536274,1536520..1537760,1537813..1537872,1537918..1538028,1538064..1538508,1538702..1538947,1539089..1539153,1539194..1540016,1540070..>1540200)	Theileria orientalis strain Shintoku	20716738
TOT_040000692	mRNA	TOT_040000692	NC_025263.1	1540601	1541375	R	TOT_040000692	complement(join(<1540601..1540762,1540843..1541103,1541136..>1541375))	Theileria orientalis strain Shintoku	20716739
TOT_040000693	mRNA	TOT_040000693	NC_025263.1	1541495	1542156	D	TOT_040000693	join(<1541495..1541963,1541996..1542075,1542139..>1542156)	Theileria orientalis strain Shintoku	20716740
TOT_040000694	mRNA	TOT_040000694	NC_025263.1	1542290	1545160	D	TOT_040000694	join(<1542290..1542584,1542614..1542923,1542955..1543911,1544032..1544309,1544778..>1545160)	Theileria orientalis strain Shintoku	20716741
TOT_040000695	mRNA	TOT_040000695	NC_025263.1	1545319	1547595	R	TOT_040000695	complement(join(<1545319..1545921,1546077..1546090,1546299..>1547595))	Theileria orientalis strain Shintoku	20716742
TOT_040000696	mRNA	TOT_040000696	NC_025263.1	1547869	1549792	D	TOT_040000696	join(<1547869..1549216,1549421..1549617,1549685..>1549792)	Theileria orientalis strain Shintoku	20716743
TOT_040000697	mRNA	TOT_040000697	NC_025263.1	1550059	1550835	D	TOT_040000697	join(<1550059..1550305,1550377..1550487,1550519..>1550835)	Theileria orientalis strain Shintoku	20716744
TOT_040000698	mRNA	TOT_040000698	NC_025263.1	1551252	1552029	D	TOT_040000698	join(<1551252..1551558,1551592..1551699,1551731..>1552029)	Theileria orientalis strain Shintoku	20716745
TOT_040000699	mRNA	TOT_040000699	NC_025263.1	1552381	1553101	D	TOT_040000699	join(<1552381..1552639,1552726..1552836,1552869..>1553101)	Theileria orientalis strain Shintoku	20716746
TOT_040000700	mRNA	TOT_040000700	NC_025263.1	1554020	1554481	D	TOT_040000700	<1554020..>1554481	Theileria orientalis strain Shintoku	20716747
TOT_040000701	mRNA	TOT_040000701	NC_025263.1	1554908	1555653	D	TOT_040000701	join(<1554908..1555166,1555199..1555306,1555340..>1555653)	Theileria orientalis strain Shintoku	20716748
TOT_040000702	mRNA	TOT_040000702	NC_025263.1	1556215	1556990	D	TOT_040000702	join(<1556215..1556482,1556513..1556620,1556653..>1556990)	Theileria orientalis strain Shintoku	20716749
TOT_040000703	mRNA	TOT_040000703	NC_025263.1	1557336	1558078	D	TOT_040000703	join(<1557336..1557597,1557629..1557736,1557768..>1558078)	Theileria orientalis strain Shintoku	20716750
TOT_040000704	mRNA	TOT_040000704	NC_025263.1	1558473	1559238	D	TOT_040000704	join(<1558473..1558734,1558766..>1559238)	Theileria orientalis strain Shintoku	20716751
TOT_040000705	mRNA	TOT_040000705	NC_025263.1	1559262	1560047	R	TOT_040000705	complement(<1559262..>1560047)	Theileria orientalis strain Shintoku	20716752
TOT_040000706	mRNA	TOT_040000706	NC_025263.1	1561288	1563662	D	TOT_040000706	join(<1561288..1561785,1561800..1562185,1562326..1562430,1562609..>1563662)	Theileria orientalis strain Shintoku	20716753
TOT_040000707	mRNA	TOT_040000707	NC_025263.1	1563840	1564834	D	TOT_040000707	join(<1563840..1564430,1564463..1564510,1564652..>1564834)	Theileria orientalis strain Shintoku	20716754
TOT_040000708	mRNA	TOT_040000708	NC_025263.1	1565633	1566181	R	TOT_040000708	complement(<1565633..>1566181)	Theileria orientalis strain Shintoku	20716755
TOT_040000709	mRNA	TOT_040000709	NC_025263.1	1566973	1568133	R	TOT_040000709	complement(join(<1566973..1567393,1567426..1567678,1567755..1567889,1567933..1568049,1568088..>1568133))	Theileria orientalis strain Shintoku	20716756
TOT_040000710	mRNA	TOT_040000710	NC_025263.1	1569119	1569709	R	TOT_040000710	complement(<1569119..>1569709)	Theileria orientalis strain Shintoku	20716757
TOT_040000711	mRNA	TOT_040000711	NC_025263.1	1570596	1571727	R	TOT_040000711	complement(join(<1570596..1570952,1570984..1571187,1571219..1571466,1571499..>1571727))	Theileria orientalis strain Shintoku	20716758
TOT_040000712	mRNA	TOT_040000712	NC_025263.1	1572428	1573203	R	TOT_040000712	complement(join(<1572428..1573020,1573122..>1573203))	Theileria orientalis strain Shintoku	20716759
TOT_040000975	mRNA	TOT_040000975	NC_025263.1	1573944	1577076	R	TOT_040000975	complement(join(<1573944..1574459,1574910..1576939,1576983..>1577076))	Theileria orientalis strain Shintoku	20716995
TOT_040000713	mRNA	TOT_040000713	NC_025263.1	1577144	1578711	R	TOT_040000713	complement(join(<1577144..1577380,1577539..1578056,1578306..>1578711))	Theileria orientalis strain Shintoku	20716760
TOT_040000714	mRNA	TOT_040000714	NC_025263.1	1578892	1579611	D	TOT_040000714	<1578892..>1579611	Theileria orientalis strain Shintoku	20716761
TOT_040000715	mRNA	TOT_040000715	NC_025263.1	1579704	1584779	D	TOT_040000715	join(<1579704..1581474,1581718..1581997,1582061..1582402,1582437..1582788,1583037..1583961,1584076..>1584779)	Theileria orientalis strain Shintoku	20716762
TOT_040000716	mRNA	TOT_040000716	NC_025263.1	1584921	1587671	R	TOT_040000716	complement(join(<1584921..1584987,1585063..1585157,1585304..1585487,1585570..1585836,1585928..1586054,1586123..1586213,1586267..1586560,1586622..1586724,1586822..1587315,1587348..1587463,1587533..>1587671))	Theileria orientalis strain Shintoku	20716763
TOT_040000717	mRNA	TOT_040000717	NC_025263.1	1588108	1592011	D	TOT_040000717	join(<1588108..1588438,1588524..>1592011)	Theileria orientalis strain Shintoku	20716764
TOT_040000718	mRNA	TOT_040000718	NC_025263.1	1593021	1593215	D	TOT_040000718	<1593021..>1593215	Theileria orientalis strain Shintoku	20716765
TOT_040000719	mRNA	TOT_040000719	NC_025263.1	1594173	1595181	D	TOT_040000719	join(<1594173..1594607,1594750..>1595181)	Theileria orientalis strain Shintoku	20716766
TOT_040000720	mRNA	TOT_040000720	NC_025263.1	1595460	1595999	R	TOT_040000720	complement(<1595460..>1595999)	Theileria orientalis strain Shintoku	20716767
TOT_040000976	mRNA	TOT_040000976	NC_025263.1	1596709	1596909	D	TOT_040000976	<1596709..>1596909	Theileria orientalis strain Shintoku	20716996
TOT_040000722	mRNA	TOT_040000722	NC_025263.1	1597844	1602160	D	TOT_040000722	join(<1597844..1599521,1599981..1600034,1600173..1600833,1600903..>1602160)	Theileria orientalis strain Shintoku	20716768
TOT_040000723	mRNA	TOT_040000723	NC_025263.1	1602636	1606769	R	TOT_040000723	complement(join(<1602636..1603182,1603425..1603909,1604169..1604381,1604461..1604719,1604897..1605030,1605151..1605419,1605496..1605769,1605805..1605969,1606044..>1606769))	Theileria orientalis strain Shintoku	20716769
TOT_040000724	mRNA	TOT_040000724	NC_025263.1	1607538	1609069	D	TOT_040000724	join(<1607538..1607543,1607573..>1609069)	Theileria orientalis strain Shintoku	20716770
TOT_040000725	mRNA	TOT_040000725	NC_025263.1	1609073	1609319	R	TOT_040000725	complement(join(<1609073..1609200,1609289..>1609319))	Theileria orientalis strain Shintoku	20716771
TOT_040000726	mRNA	TOT_040000726	NC_025263.1	1609410	1612331	D	TOT_040000726	join(<1609410..1610891,1610943..1611578,1611660..1611812,1611987..>1612331)	Theileria orientalis strain Shintoku	20716772
TOT_040000727	mRNA	TOT_040000727	NC_025263.1	1612614	1614044	R	TOT_040000727	complement(join(<1612614..1612783,1612922..1613151,1613192..1613377,1613529..1613625,1613714..>1614044))	Theileria orientalis strain Shintoku	20716773
TOT_040000977	mRNA	TOT_040000977	NC_025263.1	1614292	1614907	D	TOT_040000977	join(<1614292..1614342,1614530..1614623,1614714..>1614907)	Theileria orientalis strain Shintoku	20716997
TOT_040000978	mRNA	TOT_040000978	NC_025263.1	1615842	1616846	D	TOT_040000978	join(<1615842..1615928,1616105..1616330,1616509..>1616846)	Theileria orientalis strain Shintoku	20716998
TOT_040000730	mRNA	TOT_040000730	NC_025263.1	1616961	1618013	R	TOT_040000730	complement(join(<1616961..1617199,1617300..1617485,1617524..1617704,1617753..>1618013))	Theileria orientalis strain Shintoku	20716774
TOT_040000731	mRNA	TOT_040000731	NC_025263.1	1618047	1618414	D	TOT_040000731	join(<1618047..1618135,1618231..>1618414)	Theileria orientalis strain Shintoku	20716775
TOT_040000732	mRNA	TOT_040000732	NC_025263.1	1618503	1620061	R	TOT_040000732	complement(join(<1618503..1618634,1618671..1618788,1618821..1618912,1618997..1619100,1619247..1619391,1619553..1619609,1619687..>1620061))	Theileria orientalis strain Shintoku	20716776
TOT_040000733	mRNA	TOT_040000733	NC_025263.1	1620625	1624709	D	TOT_040000733	join(<1620625..1620730,1620806..1623296,1623378..1623725,1623930..1624154,1624368..1624446,1624542..>1624709)	Theileria orientalis strain Shintoku	20716777
TOT_040000734	mRNA	TOT_040000734	NC_025263.1	1625266	1627608	D	TOT_040000734	join(<1625266..1626074,1626117..1626204,1626250..1627235,1627287..>1627608)	Theileria orientalis strain Shintoku	20716778
TOT_040000735	mRNA	TOT_040000735	NC_025263.1	1627852	1631061	R	TOT_040000735	complement(join(<1627852..1627919,1627956..>1631061))	Theileria orientalis strain Shintoku	20716779
TOT_040000736	mRNA	TOT_040000736	NC_025263.1	1631966	1632679	R	TOT_040000736	complement(join(<1631966..1632454,1632551..>1632679))	Theileria orientalis strain Shintoku	20716780
TOT_040000737	mRNA	TOT_040000737	NC_025263.1	1633757	1634388	D	TOT_040000737	join(<1633757..1633859,1634030..1634143,1634255..>1634388)	Theileria orientalis strain Shintoku	20716781
TOT_040000738	mRNA	TOT_040000738	NC_025263.1	1634703	1635499	D	TOT_040000738	join(<1634703..1634884,1635045..1635142,1635204..1635303,1635418..>1635499)	Theileria orientalis strain Shintoku	20716782
TOT_040000739	mRNA	TOT_040000739	NC_025263.1	1635779	1636370	D	TOT_040000739	join(<1635779..1635829,1636032..1636190,1636308..>1636370)	Theileria orientalis strain Shintoku	20716783
TOT_040000740	mRNA	TOT_040000740	NC_025263.1	1636461	1639079	D	TOT_040000740	join(<1636461..1638058,1638263..1638361,1638524..1638942,1639021..>1639079)	Theileria orientalis strain Shintoku	20716784
TOT_040000741	mRNA	TOT_040000741	NC_025263.1	1639220	1642016	R	TOT_040000741	complement(join(<1639220..1639522,1639618..1639757,1639857..1640049,1640435..1640441,1640550..1641288,1641686..>1642016))	Theileria orientalis strain Shintoku	20716785
TOT_040000742	mRNA	TOT_040000742	NC_025263.1	1644983	1645153	D	TOT_040000742	<1644983..>1645153	Theileria orientalis strain Shintoku	20716786
TOT_040000743	mRNA	TOT_040000743	NC_025263.1	1645159	1646802	R	TOT_040000743	complement(join(<1645159..1645906,1646102..1646554,1646684..>1646802))	Theileria orientalis strain Shintoku	20716787
TOT_040000744	mRNA	TOT_040000744	NC_025263.1	1647457	1648564	D	TOT_040000744	join(<1647457..1648002,1648096..1648168,1648206..1648262,1648350..>1648564)	Theileria orientalis strain Shintoku	20716788
TOT_040000745	mRNA	TOT_040000745	NC_025263.1	1649449	1649886	D	TOT_040000745	<1649449..>1649886	Theileria orientalis strain Shintoku	20716789
TOT_040000746	mRNA	TOT_040000746	NC_025263.1	1650152	1660964	R	TOT_040000746	complement(join(<1650152..1650241,1650414..>1660964))	Theileria orientalis strain Shintoku	20716790
TOT_040000979	mRNA	TOT_040000979	NC_025263.1	1661038	1671504	R	TOT_040000979	complement(join(<1661038..1661191,1661214..1661271,1661352..1661591,1661634..1661786,1661955..1668016,1668230..>1671504))	Theileria orientalis strain Shintoku	20716999
TOT_040000748	mRNA	TOT_040000748	NC_025263.1	1671589	1675011	D	TOT_040000748	join(<1671589..1671625,1672103..1672757,1673016..>1675011)	Theileria orientalis strain Shintoku	20716791
TOT_040000749	mRNA	TOT_040000749	NC_025263.1	1675426	1677182	D	TOT_040000749	join(<1675426..1675792,1675926..1676510,1676640..1676960,1676992..>1677182)	Theileria orientalis strain Shintoku	20716792
TOT_040000750	mRNA	TOT_040000750	NC_025263.1	1677735	1679096	D	TOT_040000750	join(<1677735..1678059,1678229..1678443,1678626..1678768,1678823..>1679096)	Theileria orientalis strain Shintoku	20716793
TOT_040000751	mRNA	TOT_040000751	NC_025263.1	1679753	1681456	D	TOT_040000751	<1679753..>1681456	Theileria orientalis strain Shintoku	20716794
TOT_040000752	mRNA	TOT_040000752	NC_025263.1	1681752	1685606	R	TOT_040000752	complement(join(<1681752..1682753,1682850..>1685606))	Theileria orientalis strain Shintoku	20716795
TOT_040000753	mRNA	TOT_040000753	NC_025263.1	1686165	1687968	R	TOT_040000753	complement(join(<1686165..1686576,1686607..1687001,1687045..1687392,1687454..1687786,1687876..>1687968))	Theileria orientalis strain Shintoku	20716796
TOT_040000754	mRNA	TOT_040000754	NC_025263.1	1688065	1691968	D	TOT_040000754	join(<1688065..1688309,1688409..1689060,1689151..1689273,1689507..1689711,1689828..1690094,1690212..1690478,1690599..>1691968)	Theileria orientalis strain Shintoku	20716797
TOT_040000755	mRNA	TOT_040000755	NC_025263.1	1692048	1692221	R	TOT_040000755	complement(<1692048..>1692221)	Theileria orientalis strain Shintoku	20716798
TOT_040000756	mRNA	TOT_040000756	NC_025263.1	1692303	1693742	R	TOT_040000756	complement(<1692303..>1693742)	Theileria orientalis strain Shintoku	20716799
TOT_040000757	mRNA	TOT_040000757	NC_025263.1	1693929	1694108	D	TOT_040000757	<1693929..>1694108	Theileria orientalis strain Shintoku	20716800
TOT_040000758	mRNA	TOT_040000758	NC_025263.1	1694165	1694453	R	TOT_040000758	complement(join(<1694165..1694174,1694185..>1694453))	Theileria orientalis strain Shintoku	20716801
TOT_040000759	mRNA	TOT_040000759	NC_025263.1	1694483	1696003	R	TOT_040000759	complement(<1694483..>1696003)	Theileria orientalis strain Shintoku	20716802
TOT_040000760	mRNA	TOT_040000760	NC_025263.1	1696350	1696811	D	TOT_040000760	<1696350..>1696811	Theileria orientalis strain Shintoku	20716803
TOT_040000761	mRNA	TOT_040000761	NC_025263.1	1696997	1698054	R	TOT_040000761	complement(join(<1696997..1697107,1697224..1697332,1697427..1697653,1697992..>1698054))	Theileria orientalis strain Shintoku	20716804
TOT_040000762	mRNA	TOT_040000762	NC_025263.1	1699121	1699444	D	TOT_040000762	<1699121..>1699444	Theileria orientalis strain Shintoku	20716805
TOT_040000763	mRNA	TOT_040000763	NC_025263.1	1699822	1703146	D	TOT_040000763	join(<1699822..1700032,1700143..1700629,1700663..1700772,1701024..1701186,1701319..1701400,1701436..1701549,1701592..1701754,1701933..1702040,1702075..1702822,1703002..>1703146)	Theileria orientalis strain Shintoku	20716806
TOT_040000764	mRNA	TOT_040000764	NC_025263.1	1703224	1714179	D	TOT_040000764	join(<1703224..1703326,1703608..1704726,1704811..1706207,1706262..1706687,1706787..1706807,1706877..1707941,1708086..1708867,1709132..1709295,1710589..1711823,1711944..1712065,1712142..1712583,1712815..1713774,1714054..>1714179)	Theileria orientalis strain Shintoku	20716807
TOT_040000765	mRNA	TOT_040000765	NC_025263.1	1714392	1716159	R	TOT_040000765	complement(join(<1714392..1714644,1714890..1715015,1715151..1715375,1715551..1715753,1715827..1716065,1716132..>1716159))	Theileria orientalis strain Shintoku	20716808
TOT_040000766	mRNA	TOT_040000766	NC_025263.1	1716296	1718487	D	TOT_040000766	join(<1716296..1716424,1716521..1716798,1716926..1717035,1717076..1717110,1717143..1717284,1717373..1717621,1717780..1718273,1718305..>1718487)	Theileria orientalis strain Shintoku	20716809
TOT_040000767	mRNA	TOT_040000767	NC_025263.1	1718616	1719979	R	TOT_040000767	complement(join(<1718616..1718870,1718909..1718999,1719252..1719469,1719500..1719777,1719808..1719893,1719927..>1719979))	Theileria orientalis strain Shintoku	20716810
TOT_040000768	mRNA	TOT_040000768	NC_025263.1	1720310	1721851	R	TOT_040000768	complement(join(<1720310..1720594,1720624..1720717,1720808..1720947,1720979..1721038,1721355..1721632,1721666..1721751,1721784..>1721851))	Theileria orientalis strain Shintoku	20716811
TOT_040000769	mRNA	TOT_040000769	NC_025263.1	1722010	1725005	R	TOT_040000769	complement(join(<1722010..1722303,1722385..1722570,1722679..1722738,1722790..1722918,1723008..1723285,1723316..1723401,1723432..1723553,1723626..1723823,1723888..1723981,1724045..1724106,1724137..1724184,1724214..1724273,1724306..1724434,1724481..1724752,1724829..1724914,1724944..>1725005))	Theileria orientalis strain Shintoku	20716812
TOT_040000770	mRNA	TOT_040000770	NC_025263.1	1725229	1726921	R	TOT_040000770	complement(join(<1725229..1725349,1725371..1725666,1726025..1726072,1726235..1726363,1726427..1726704,1726736..1726821,1726854..>1726921))	Theileria orientalis strain Shintoku	20716813
TOT_040000771	mRNA	TOT_040000771	NC_025263.1	1727482	1732065	R	TOT_040000771	complement(join(<1727482..1727631,1727646..1727834,1727867..1727957,1727996..1728057,1728169..1728228,1728262..1728325,1728373..1728437,1728535..1728812,1728844..1728927,1729250..1729490,1729531..1729621,1729650..1729711,1729740..1729787,1729963..1730026,1730074..1730138,1730236..1730513,1730543..1730628,1730660..1730736,1730904..1730993,1731237..1731299,1731368..1731500,1731505..1731674,1731772..>1732065))	Theileria orientalis strain Shintoku	20716814
TOT_040000772	mRNA	TOT_040000772	NC_025263.1	1732417	1732635	D	TOT_040000772	<1732417..>1732635	Theileria orientalis strain Shintoku	20716815
TOT_040000773	mRNA	TOT_040000773	NC_025263.1	1732645	1733946	R	TOT_040000773	complement(join(<1732645..1732733,1732748..1732970,1733112..1733435,1733468..1733698,1733884..>1733946))	Theileria orientalis strain Shintoku	20716816
TOT_040000980	mRNA	TOT_040000980	NC_025263.1	1734274	1735228	R	TOT_040000980	complement(join(<1734274..1734821,1735022..1735122,1735224..>1735228))	Theileria orientalis strain Shintoku	20717000
TOT_040000775	mRNA	TOT_040000775	NC_025263.1	1736000	1736841	D	TOT_040000775	join(<1736000..1736047,1736074..1736227,1736313..1736378,1736524..1736570,1736731..>1736841)	Theileria orientalis strain Shintoku	20716817
TOT_040000776	mRNA	TOT_040000776	NC_025263.1	1737121	1738853	D	TOT_040000776	join(<1737121..1738426,1738530..1738594,1738743..>1738853)	Theileria orientalis strain Shintoku	20716818
TOT_040000777	mRNA	TOT_040000777	NC_025263.1	1739074	1741139	D	TOT_040000777	join(<1739074..1739193,1739601..>1741139)	Theileria orientalis strain Shintoku	20716819
TOT_040000778	mRNA	TOT_040000778	NC_025263.1	1741189	1745553	D	TOT_040000778	join(<1741189..1741300,1741462..1741603,1741624..1741706,1741715..1741847,1741876..1741923,1741954..1742709,1742914..1744536,1744545..1744580,1744815..1745279,1745363..1745476,1745481..>1745553)	Theileria orientalis strain Shintoku	20716820
TOT_040000779	mRNA	TOT_040000779	NC_025263.1	1745678	1747473	R	TOT_040000779	complement(join(<1745678..1745799,1745913..1746022,1746099..1746196,1746378..1746524,1746650..1746844,1746913..1746990,1747114..1747242,1747402..>1747473))	Theileria orientalis strain Shintoku	20716821
TOT_040000780	mRNA	TOT_040000780	NC_025263.1	1747818	1749179	D	TOT_040000780	join(<1747818..1748354,1748508..1748787,1748992..>1749179)	Theileria orientalis strain Shintoku	20716822
TOT_040000781	mRNA	TOT_040000781	NC_025263.1	1749646	1750785	R	TOT_040000781	complement(join(<1749646..1749968,1750066..1750105,1750255..1750417,1750568..>1750785))	Theileria orientalis strain Shintoku	20716823
TOT_040000782	mRNA	TOT_040000782	NC_025263.1	1751261	1751660	D	TOT_040000782	join(<1751261..1751419,1751523..>1751660)	Theileria orientalis strain Shintoku	20716824
TOT_040000783	mRNA	TOT_040000783	NC_025263.1	1751795	1752414	R	TOT_040000783	complement(join(<1751795..1752262,1752388..>1752414))	Theileria orientalis strain Shintoku	20716825
TOT_040000784	mRNA	TOT_040000784	NC_025263.1	1754175	1756325	D	TOT_040000784	<1754175..>1756325	Theileria orientalis strain Shintoku	20716826
TOT_040000785	mRNA	TOT_040000785	NC_025263.1	1758690	1760264	R	TOT_040000785	complement(join(<1758690..1759372,1759440..1759758,1759821..>1760264))	Theileria orientalis strain Shintoku	20716827
TOT_040000786	mRNA	TOT_040000786	NC_025263.1	1760891	1762746	D	TOT_040000786	join(<1760891..1761038,1761117..1761287,1761368..1761409,1761448..1761578,1761723..1761779,1761844..1761996,1762178..1762294,1762510..>1762746)	Theileria orientalis strain Shintoku	20716828
TOT_040000787	mRNA	TOT_040000787	NC_025263.1	1763250	1764128	D	TOT_040000787	join(<1763250..1763444,1763814..>1764128)	Theileria orientalis strain Shintoku	20716829
TOT_040000788	mRNA	TOT_040000788	NC_025263.1	1764445	1765025	R	TOT_040000788	complement(join(<1764445..1764626,1764842..>1765025))	Theileria orientalis strain Shintoku	20716830
TOT_040000789	mRNA	TOT_040000789	NC_025263.1	1765636	1766452	D	TOT_040000789	join(<1765636..1765815,1766099..>1766452)	Theileria orientalis strain Shintoku	20716831
TOT_040000790	mRNA	TOT_040000790	NC_025263.1	1766449	1772287	R	TOT_040000790	complement(join(<1766449..1769368,1769404..1771978,1771986..1772248,1772256..>1772287))	Theileria orientalis strain Shintoku	20716832
TOT_040000791	mRNA	TOT_040000791	NC_025263.1	1772397	1773808	R	TOT_040000791	complement(join(<1772397..1772554,1772623..1772662,1772694..1772769,1772839..1772921,1773039..1773108,1773147..1773259,1773396..1773499,1773706..>1773808))	Theileria orientalis strain Shintoku	20716833
TOT_040000792	mRNA	TOT_040000792	NC_025263.1	1774191	1778296	D	TOT_040000792	join(<1774191..1774271,1774359..1774430,1774533..1774656,1774734..1774807,1774980..1775194,1775249..1775562,1775620..1775841,1776041..1776488,1776710..1776892,1776990..1777247,1777418..1778052,1778124..>1778296)	Theileria orientalis strain Shintoku	20716834
TOT_040000793	mRNA	TOT_040000793	NC_025263.1	1779011	1780396	D	TOT_040000793	join(<1779011..1780051,1780343..>1780396)	Theileria orientalis strain Shintoku	20716835
TOT_040000794	mRNA	TOT_040000794	NC_025263.1	1780554	1781203	R	TOT_040000794	complement(join(<1780554..1780865,1781117..>1781203))	Theileria orientalis strain Shintoku	20716836
TOT_040000795	mRNA	TOT_040000795	NC_025263.1	1782690	1784777	D	TOT_040000795	join(<1782690..1783458,1783627..>1784777)	Theileria orientalis strain Shintoku	20716837
TOT_040000796	mRNA	TOT_040000796	NC_025263.1	1785412	1786737	D	TOT_040000796	<1785412..>1786737	Theileria orientalis strain Shintoku	20716838
TOT_040000797	mRNA	TOT_040000797	NC_025263.1	1786904	1788224	R	TOT_040000797	complement(join(<1786904..1786997,1787326..>1788224))	Theileria orientalis strain Shintoku	20716839
TOT_040000798	mRNA	TOT_040000798	NC_025263.1	1788629	1788995	R	TOT_040000798	complement(join(<1788629..1788849,1788956..>1788995))	Theileria orientalis strain Shintoku	20716840
TOT_040000799	mRNA	TOT_040000799	NC_025263.1	1789347	1794539	R	TOT_040000799	complement(<1789347..>1794539)	Theileria orientalis strain Shintoku	20716841
TOT_040000800	mRNA	TOT_040000800	NC_025263.1	1794930	1795163	D	TOT_040000800	join(<1794930..1794996,1795123..>1795163)	Theileria orientalis strain Shintoku	20716842
TOT_040000801	mRNA	TOT_040000801	NC_025263.1	1795200	1795552	R	TOT_040000801	complement(join(<1795200..1795356,1795383..>1795552))	Theileria orientalis strain Shintoku	20716843
TOT_040000802	mRNA	TOT_040000802	NC_025263.1	1795581	1797593	R	TOT_040000802	complement(join(<1795581..1795953,1795986..1796258,1796325..1796619,1796786..1796893,1796979..1797078,1797113..1797230,1797532..>1797593))	Theileria orientalis strain Shintoku	20716844
TOT_040000803	mRNA	TOT_040000803	NC_025263.1	1798596	1799008	R	TOT_040000803	complement(join(<1798596..1798697,1798757..1798849,1798937..>1799008))	Theileria orientalis strain Shintoku	20716845
TOT_040000804	mRNA	TOT_040000804	NC_025263.1	1799337	1801197	D	TOT_040000804	join(<1799337..1799502,1799668..1799717,1799799..1800613,1800704..1800784,1800869..1800995,1801069..>1801197)	Theileria orientalis strain Shintoku	20716846
TOT_040000805	mRNA	TOT_040000805	NC_025263.1	1801245	1802645	D	TOT_040000805	join(<1801245..1801392,1801487..1801572,1801658..1801775,1801821..1801848,1801884..1801915,1802121..1802281,1802505..>1802645)	Theileria orientalis strain Shintoku	20716847
TOT_040000806	mRNA	TOT_040000806	NC_025263.1	1802865	1805306	R	TOT_040000806	complement(join(<1802865..1803079,1803198..1803293,1803388..1803503,1803606..1803888,1804156..1804620,1804686..1804953,1805103..>1805306))	Theileria orientalis strain Shintoku	20716848
TOT_040000807	mRNA	TOT_040000807	NC_025263.1	1805824	1810548	D	TOT_040000807	join(<1805824..1805935,1806050..1806324,1806461..1806676,1806746..1807601,1807721..1808521,1808768..1809412,1809650..>1810548)	Theileria orientalis strain Shintoku	20716849
TOT_040000808	mRNA	TOT_040000808	NC_025263.1	1810742	1812892	R	TOT_040000808	complement(join(<1810742..1810936,1811070..1811150,1811265..1811366,1811532..1811600,1811725..1811827,1811952..1812016,1812160..1812281,1812408..1812596,1812871..>1812892))	Theileria orientalis strain Shintoku	20716850
TOT_040000809	mRNA	TOT_040000809	NC_025263.1	1813305	1814144	R	TOT_040000809	complement(<1813305..>1814144)	Theileria orientalis strain Shintoku	20716851
TOT_040000810	mRNA	TOT_040000810	NC_025263.1	1815023	1816990	R	TOT_040000810	complement(<1815023..>1816990)	Theileria orientalis strain Shintoku	20716852
TOT_040000811	mRNA	TOT_040000811	NC_025263.1	1817010	1819273	R	TOT_040000811	complement(join(<1817010..1817104,1818016..>1819273))	Theileria orientalis strain Shintoku	20716853
TOT_040000812	mRNA	TOT_040000812	NC_025263.1	1819903	1822500	R	TOT_040000812	complement(<1819903..>1822500)	Theileria orientalis strain Shintoku	20716854
TOT_040000813	mRNA	TOT_040000813	NC_025263.1	1822564	1822818	D	TOT_040000813	join(<1822564..1822567,1822667..>1822818)	Theileria orientalis strain Shintoku	20716855
TOT_040000814	mRNA	TOT_040000814	NC_025263.1	1824600	1830473	R	TOT_040000814	complement(join(<1824600..1824950,1824990..1826246,1827246..>1830473))	Theileria orientalis strain Shintoku	20716856
TOT_040000815	mRNA	TOT_040000815	NC_025263.1	1830972	1835135	R	TOT_040000815	complement(<1830972..>1835135)	Theileria orientalis strain Shintoku	20716857
TOT_040000816	mRNA	TOT_040000816	NC_025263.1	1835700	1839008	D	TOT_040000816	join(<1835700..1835900,1836009..1836182,1836258..1836507,1836739..1836914,1837149..1837538,1837572..1838491,1838579..>1839008)	Theileria orientalis strain Shintoku	20716858
TOT_040000817	mRNA	TOT_040000817	NC_025263.1	1839374	1843588	D	TOT_040000817	join(<1839374..1839418,1839640..1839799,1839884..1840043,1840234..1840430,1840591..1840737,1840975..1841100,1841248..1841390,1841764..1842109,1842470..1843036,1843371..>1843588)	Theileria orientalis strain Shintoku	20716859
TOT_040000818	mRNA	TOT_040000818	NC_025263.1	1843671	1843952	R	TOT_040000818	complement(join(<1843671..1843763,1843860..>1843952))	Theileria orientalis strain Shintoku	20716860
TOT_040000819	mRNA	TOT_040000819	NC_025263.1	1845311	1848368	D	TOT_040000819	join(<1845311..1845413,1845622..1846476,1846624..1847195,1847250..1847483,1847609..1847703,1847741..>1848368)	Theileria orientalis strain Shintoku	20716861
TOT_040000820	mRNA	TOT_040000820	NC_025263.1	1848631	1850772	D	TOT_040000820	join(<1848631..1848665,1848862..1849098,1849192..1849274,1849432..1849524,1849597..1849688,1849792..1850108,1850196..1850562,1850641..>1850772)	Theileria orientalis strain Shintoku	20716862
TOT_040000821	mRNA	TOT_040000821	NC_025263.1	1853102	1856572	D	TOT_040000821	join(<1853102..1855368,1855648..1856141,1856433..>1856572)	Theileria orientalis strain Shintoku	20716863
TOT_040000822	mRNA	TOT_040000822	NC_025263.1	1857595	1857966	D	TOT_040000822	<1857595..>1857966	Theileria orientalis strain Shintoku	20716864
TOT_040000981	mRNA	TOT_040000981	NC_025263.1	1858292	1858618	R	TOT_040000981	complement(join(<1858292..1858363,1858508..>1858618))	Theileria orientalis strain Shintoku	20717001
TOT_040000824	mRNA	TOT_040000824	NC_025263.1	1859181	1860286	D	TOT_040000824	join(<1859181..1859377,1859537..1859624,1859759..1859848,1859883..1859973,1860078..>1860286)	Theileria orientalis strain Shintoku	20716865
TOT_040000825	mRNA	TOT_040000825	NC_025263.1	1860651	1861723	D	TOT_040000825	join(<1860651..1860834,1861022..1861258,1861443..>1861723)	Theileria orientalis strain Shintoku	20716866
TOT_040000826	mRNA	TOT_040000826	NC_025263.1	1862410	1864353	R	TOT_040000826	complement(<1862410..>1864353)	Theileria orientalis strain Shintoku	20716867
TOT_040000827	mRNA	TOT_040000827	NC_025263.1	1867288	1869531	D	TOT_040000827	<1867288..>1869531	Theileria orientalis strain Shintoku	20716868
TOT_040000828	mRNA	TOT_040000828	NC_025263.1	1870300	1871058	R	TOT_040000828	complement(join(<1870300..1870447,1870477..1870566,1870637..1870727,1870759..1870837,1870881..1871012,1871050..>1871058))	Theileria orientalis strain Shintoku	20716869
TOT_040000829	mRNA	TOT_040000829	NC_025263.1	1871741	1872390	R	TOT_040000829	complement(join(<1871741..1871792,1871813..1871898,1871930..1872078,1872148..1872244,1872283..>1872390))	Theileria orientalis strain Shintoku	20716870
TOT_040000830	mRNA	TOT_040000830	NC_025263.1	1872589	1873283	D	TOT_040000830	join(<1872589..1872873,1872931..1873089,1873121..1873181,1873213..>1873283)	Theileria orientalis strain Shintoku	20716871
TOT_040000831	mRNA	TOT_040000831	NC_025263.1	1873392	1873556	D	TOT_040000831	<1873392..>1873556	Theileria orientalis strain Shintoku	20716872
TOT_040000832	mRNA	TOT_040000832	NC_025263.1	1873579	1874172	R	TOT_040000832	complement(<1873579..>1874172)	Theileria orientalis strain Shintoku	20716873
TOT_040000833	mRNA	TOT_040000833	NC_025263.1	1874285	1878451	D	TOT_040000833	join(<1874285..1874434,1874465..1874520,1874558..1874732,1874763..1874935,1874967..1875008,1875105..1875329,1875360..1875450,1875515..1875795,1876215..1877011,1877078..1877134,1877222..1877739,1878398..>1878451)	Theileria orientalis strain Shintoku	20716874
TOT_040000834	mRNA	TOT_040000834	NC_025263.1	1878635	1881052	D	TOT_040000834	<1878635..>1881052	Theileria orientalis strain Shintoku	20716875
TOT_040000835	mRNA	TOT_040000835	NC_025263.1	1882067	1885486	R	TOT_040000835	complement(join(<1882067..1884247,1884275..>1885486))	Theileria orientalis strain Shintoku	20716876
TOT_040000836	mRNA	TOT_040000836	NC_025263.1	1887158	1888463	D	TOT_040000836	join(<1887158..1888292,1888441..>1888463)	Theileria orientalis strain Shintoku	20716877
TOT_040000837	mRNA	TOT_040000837	NC_025263.1	1888555	1890204	R	TOT_040000837	complement(join(<1888555..1888846,1888988..1889408,1889493..>1890204))	Theileria orientalis strain Shintoku	20716878
TOT_040000838	mRNA	TOT_040000838	NC_025263.1	1890742	1893173	D	TOT_040000838	join(<1890742..1891186,1891254..1891402,1891474..1891807,1891882..1892186,1892365..1892448,1892619..1892871,1893031..>1893173)	Theileria orientalis strain Shintoku	20716879
TOT_040000839	mRNA	TOT_040000839	NC_025263.1	1893400	1894817	D	TOT_040000839	join(<1893400..1893520,1893586..>1894817)	Theileria orientalis strain Shintoku	20716880
TOT_040000840	mRNA	TOT_040000840	NC_025263.1	1894956	1898029	D	TOT_040000840	join(<1894956..1895215,1895253..1895337,1895496..1895562,1895594..1895703,1895734..1895847,1895878..1895957,1896109..1896140,1896171..1896268,1896339..1896599,1896728..1896868,1896908..1896974,1897089..1897283,1897431..>1898029)	Theileria orientalis strain Shintoku	20716881
TOT_040000841	mRNA	TOT_040000841	NC_025263.1	1898518	1899072	D	TOT_040000841	<1898518..>1899072	Theileria orientalis strain Shintoku	20716882
TOT_040000842	mRNA	TOT_040000842	NC_025263.1	1899827	1900357	D	TOT_040000842	<1899827..>1900357	Theileria orientalis strain Shintoku	20716883
TOT_040000843	mRNA	TOT_040000843	NC_025263.1	1901013	1904739	R	TOT_040000843	complement(join(<1901013..1902041,1902592..>1904739))	Theileria orientalis strain Shintoku	20716884
TOT_040000844	mRNA	TOT_040000844	NC_025263.1	1904950	1907571	R	TOT_040000844	complement(join(<1904950..1905071,1905102..1905227,1905346..1905537,1905613..1905657,1905710..1905800,1905822..1905841,1905855..1906069,1906102..1906201,1906237..1906288,1906376..1906524,1906628..1906714,1906745..1906871,1906908..1906977,1907025..1907149,1907179..1907315,1907520..>1907571))	Theileria orientalis strain Shintoku	20716885
TOT_040000982	mRNA	TOT_040000982	NC_025263.1	1907735	1909651	D	TOT_040000982	join(<1907735..1907920,1907973..1908093,1908122..1908218,1908252..1908321,1908353..1908418,1908480..1908667,1908708..1908763,1908830..1908986,1909054..1909529,1909590..>1909651)	Theileria orientalis strain Shintoku	20717002
TOT_040000983	mRNA	TOT_040000983	NC_025263.1	1910183	1911844	D	TOT_040000983	join(<1910183..1910503,1911449..>1911844)	Theileria orientalis strain Shintoku	20717003
TOT_040000984	mRNA	TOT_040000984	NC_025263.1	1912843	1915613	D	TOT_040000984	join(<1912843..1912896,1912926..1913169,1913221..1913640,1913701..>1915613)	Theileria orientalis strain Shintoku	20717004
TOT_040000848	mRNA	TOT_040000848	NC_025263.1	1916191	1917771	R	TOT_040000848	complement(<1916191..>1917771)	Theileria orientalis strain Shintoku	20716886
TOT_040000849	mRNA	TOT_040000849	NC_025263.1	1918342	1920795	D	TOT_040000849	<1918342..>1920795	Theileria orientalis strain Shintoku	20716887
TOT_040000850	mRNA	TOT_040000850	NC_025263.1	1920962	1921804	D	TOT_040000850	<1920962..>1921804	Theileria orientalis strain Shintoku	20716888
TOT_040000851	mRNA	TOT_040000851	NC_025263.1	1922492	1927573	D	TOT_040000851	join(<1922492..1923420,1926021..1926909,1927024..1927204,1927350..>1927573)	Theileria orientalis strain Shintoku	20716889
TOT_040000985	mRNA	TOT_040000985	NC_025263.1	1928315	1928451	D	TOT_040000985	join(<1928315..1928378,1928441..>1928451)	Theileria orientalis strain Shintoku	20717005
TOT_040000853	mRNA	TOT_040000853	NC_025263.1	1931848	1934991	D	TOT_040000853	<1931848..>1934991	Theileria orientalis strain Shintoku	20716890
TOT_040000854	mRNA	TOT_040000854	NC_025263.1	1936170	1936625	D	TOT_040000854	<1936170..>1936625	Theileria orientalis strain Shintoku	20716891
TOT_040000855	mRNA	TOT_040000855	NC_025263.1	1937330	1938691	D	TOT_040000855	<1937330..>1938691	Theileria orientalis strain Shintoku	20716892
TOT_040000857	mRNA	TOT_040000857	NC_025263.1	1939232	1941631	D	TOT_040000857	<1939232..>1941631	Theileria orientalis strain Shintoku	20716893
TOT_040000858	mRNA	TOT_040000858	NC_025263.1	1941992	1942111	D	TOT_040000858	<1941992..>1942111	Theileria orientalis strain Shintoku	20716894
TOT_040000986	mRNA	TOT_040000986	NC_025263.1	1942295	1944575	R	TOT_040000986	complement(join(<1942295..1942342,1942437..1942627,1942872..1943078,1943458..1943710,1943789..1944132,1944358..1944454,1944540..>1944575))	Theileria orientalis strain Shintoku	20717006
TOT_040000860	mRNA	TOT_040000860	NC_025263.1	1944854	1946442	D	TOT_040000860	join(<1944854..1944893,1945003..1945192,1945369..1945435,1945628..1945729,1945780..1945860,1946011..1946179,1946327..>1946442)	Theileria orientalis strain Shintoku	20716895
TOT_040000861	mRNA	TOT_040000861	NC_025263.1	1946552	1947843	D	TOT_040000861	join(<1946552..1946610,1946714..1946844,1946900..>1947843)	Theileria orientalis strain Shintoku	20716896
TOT_040000862	mRNA	TOT_040000862	NC_025263.1	1947875	1948114	R	TOT_040000862	complement(join(<1947875..1947945,1947997..>1948114))	Theileria orientalis strain Shintoku	20716897
TOT_040000863	mRNA	TOT_040000863	NC_025263.1	1948898	1958696	D	TOT_040000863	join(<1948898..1951759,1951784..1952562,1954506..1956685,1956714..1956825,1956890..1956986,1957383..>1958696)	Theileria orientalis strain Shintoku	20716898
TOT_040000864	mRNA	TOT_040000864	NC_025263.1	1958858	1959047	D	TOT_040000864	join(<1958858..1958906,1958929..>1959047)	Theileria orientalis strain Shintoku	20716899
TOT_040000865	mRNA	TOT_040000865	NC_025263.1	1959391	1960099	D	TOT_040000865	join(<1959391..1959837,1959953..>1960099)	Theileria orientalis strain Shintoku	20716900
TOT_040000866	mRNA	TOT_040000866	NC_025263.1	1960752	1961330	D	TOT_040000866	<1960752..>1961330	Theileria orientalis strain Shintoku	20716901
TOT_040000987	mRNA	TOT_040000987	NC_025263.1	1961741	1962268	R	TOT_040000987	complement(join(<1961741..1961859,1961941..1962004,1962251..>1962268))	Theileria orientalis strain Shintoku	20717007
TOT_040000988	mRNA	TOT_040000988	NC_025263.1	1962512	1963276	R	TOT_040000988	complement(join(<1962512..1962589,1962710..1962889,1962973..1963102,1963194..>1963276))	Theileria orientalis strain Shintoku	20717008
TOT_040000869	mRNA	TOT_040000869	NC_025263.1	1963929	1967247	R	TOT_040000869	complement(join(<1963929..1964100,1964187..1964327,1964465..1964579,1964673..1964844,1965032..1965159,1965246..1965344,1965438..1965657,1965742..1965929,1966115..1966425,1966546..1966666,1966747..1966902,1967007..>1967247))	Theileria orientalis strain Shintoku	20716902
TOT_040000870	mRNA	TOT_040000870	NC_025263.1	1967497	1967646	R	TOT_040000870	complement(<1967497..>1967646)	Theileria orientalis strain Shintoku	20716903
TOT_040000871	mRNA	TOT_040000871	NC_025263.1	1967948	1968516	R	TOT_040000871	complement(join(<1967948..1968079,1968134..1968188,1968219..1968352,1968433..>1968516))	Theileria orientalis strain Shintoku	20716904
TOT_040000989	mRNA	TOT_040000989	NC_025263.1	1968953	1970127	D	TOT_040000989	join(<1968953..1969268,1969368..1969486,1969656..1969958,1970023..>1970127)	Theileria orientalis strain Shintoku	20717009
TOT_040000990	mRNA	TOT_040000990	NC_025263.1	1970686	1972177	D	TOT_040000990	join(<1970686..1970772,1970867..1970960,1970997..1971067,1971154..1971195,1971261..1971322,1971442..1971611,1971749..1971882,1971959..1972024,1972088..>1972177)	Theileria orientalis strain Shintoku	20717010
TOT_040000991	mRNA	TOT_040000991	NC_025263.1	1972457	1973883	D	TOT_040000991	join(<1972457..1972537,1972882..1972961,1973136..1973233,1973291..1973418,1973630..1973697,1973784..>1973883)	Theileria orientalis strain Shintoku	20717011
TOT_040000875	mRNA	TOT_040000875	NC_025263.1	1974214	1974445	R	TOT_040000875	complement(join(<1974214..1974282,1974362..>1974445))	Theileria orientalis strain Shintoku	20716905
TOT_040000876	mRNA	TOT_040000876	NC_025263.1	1976009	1980178	D	TOT_040000876	<1976009..>1980178	Theileria orientalis strain Shintoku	20716906
TOT_040000877	mRNA	TOT_040000877	NC_025263.1	1980222	1984681	R	TOT_040000877	complement(join(<1980222..1980356,1980466..1980618,1980749..1981512,1981579..>1984681))	Theileria orientalis strain Shintoku	20716907
TOT_040000878	mRNA	TOT_040000878	NC_025263.1	1985175	1987173	R	TOT_040000878	complement(join(<1985175..1985631,1985745..1986013,1986157..1986335,1986531..1986840,1987102..>1987173))	Theileria orientalis strain Shintoku	20716908
TOT_040000992	mRNA	TOT_040000992	NC_025263.1	1987460	1987540	D	TOT_040000992	<1987460..>1987540	Theileria orientalis strain Shintoku	20717012
TOT_040000880	mRNA	TOT_040000880	NC_025263.1	1988431	1989948	D	TOT_040000880	<1988431..>1989948	Theileria orientalis strain Shintoku	20716909
TOT_040000881	mRNA	TOT_040000881	NC_025263.1	1990277	1991070	D	TOT_040000881	join(<1990277..1990550,1990726..1990836,1990889..>1991070)	Theileria orientalis strain Shintoku	20716910
TOT_040000882	mRNA	TOT_040000882	NC_025263.1	1991183	1991941	R	TOT_040000882	complement(join(<1991183..1991478,1991653..1991800,1991939..>1991941))	Theileria orientalis strain Shintoku	20716911
TOT_040000883	mRNA	TOT_040000883	NC_025263.1	1992371	1993067	D	TOT_040000883	join(<1992371..1992482,1992563..1992654,1992732..>1993067)	Theileria orientalis strain Shintoku	20716912
TOT_040000885	mRNA	TOT_040000885	NC_025263.1	1993313	1993785	D	TOT_040000885	join(<1993313..1993457,1993583..>1993785)	Theileria orientalis strain Shintoku	20716913
TOT_040000886	mRNA	TOT_040000886	NC_025263.1	1994252	1994851	D	TOT_040000886	<1994252..>1994851	Theileria orientalis strain Shintoku	20716914
TOT_040000887	mRNA	TOT_040000887	NC_025263.1	1995088	1997046	R	TOT_040000887	complement(join(<1995088..1995743,1995834..1996090,1996169..1996320,1996390..1996627,1996694..>1997046))	Theileria orientalis strain Shintoku	20716915
TOT_040000888	mRNA	TOT_040000888	NC_025263.1	1997235	1998843	R	TOT_040000888	complement(join(<1997235..1997500,1997533..1997741,1997807..>1998843))	Theileria orientalis strain Shintoku	20716916
TOT_040000889	mRNA	TOT_040000889	NC_025263.1	1999126	1999377	D	TOT_040000889	<1999126..>1999377	Theileria orientalis strain Shintoku	20716917
TOT_040000890	mRNA	TOT_040000890	NC_025263.1	2000063	2008793	D	TOT_040000890	join(<2000063..2000406,2000607..2001561,2001734..2002037,2002259..2003002,2003071..2003554,2004236..2004771,2004859..2008326,2008429..>2008793)	Theileria orientalis strain Shintoku	20716918
TOT_040000891	mRNA	TOT_040000891	NC_025263.1	2010040	2012520	R	TOT_040000891	complement(<2010040..>2012520)	Theileria orientalis strain Shintoku	20716919
TOT_040000892	mRNA	TOT_040000892	NC_025263.1	2012562	2012729	D	TOT_040000892	<2012562..>2012729	Theileria orientalis strain Shintoku	20716920
TOT_040000893	mRNA	TOT_040000893	NC_025263.1	2012820	2013020	R	TOT_040000893	complement(<2012820..>2013020)	Theileria orientalis strain Shintoku	20716921
TOT_040000993	mRNA	TOT_040000993	NC_025263.1	2013262	2016271	R	TOT_040000993	complement(join(<2013262..2014037,2014120..2014479,2014768..>2016271))	Theileria orientalis strain Shintoku	20717013
TOT_040000895	mRNA	TOT_040000895	NC_025263.1	2017337	2018909	D	TOT_040000895	join(<2017337..2017411,2017534..2017644,2017663..2017977,2018125..2018432,2018547..2018641,2018701..>2018909)	Theileria orientalis strain Shintoku	20716922
TOT_060000001	mRNA	TOT_060000001	NW_009646192.1	1	1208	D	TOT_060000001	<1..>1208	Theileria orientalis strain Shintoku	20717033
TOT_050000011	mRNA	TOT_050000011	NW_009646193.1	557	925	R	TOT_050000011	complement(<557..>925)	Theileria orientalis strain Shintoku	20717032
TOT_050000002	mRNA	TOT_050000002	NW_009646193.1	3582	4271	R	TOT_050000002	complement(join(<3582..3637,4010..>4271))	Theileria orientalis strain Shintoku	20717028
TOT_050000001	mRNA	TOT_050000001	NW_009646193.1	4965	5712	R	TOT_050000001	complement(join(<4965..5164,5196..>5712))	Theileria orientalis strain Shintoku	20717027
TOT_050000008	mRNA	TOT_050000008	NW_009646193.1	15441	16854	R	TOT_050000008	complement(join(<15441..15625,16151..16333,16719..>16854))	Theileria orientalis strain Shintoku	20717029
TOT_050000009	mRNA	TOT_050000009	NW_009646193.1	17497	20829	R	TOT_050000009	complement(join(<17497..18173,18366..18591,19207..>20829))	Theileria orientalis strain Shintoku	20717030
TOT_050000010	mRNA	TOT_050000010	NW_009646193.1	23520	24008	R	TOT_050000010	complement(<23520..>24008)	Theileria orientalis strain Shintoku	20717031
TOT_01t000001	tRNA	TOT_01t000001	NC_025260.1	94742	94824	D	tRNA-Tyr	94742..94824	Theileria orientalis strain Shintoku	20714175
TOT_01t000002	tRNA	TOT_01t000002	NC_025260.1	180510	180582	D	tRNA-Phe	180510..180582	Theileria orientalis strain Shintoku	20714176
TOT_01t000003	tRNA	TOT_01t000003	NC_025260.1	180873	180944	D	tRNA-His	180873..180944	Theileria orientalis strain Shintoku	20714177
TOT_01t000015	tRNA	TOT_01t000015	NC_025260.1	265379	265450	R	tRNA-Asp	complement(265379..265450)	Theileria orientalis strain Shintoku	20714189
TOT_01t000014	tRNA	TOT_01t000014	NC_025260.1	265984	266055	R	tRNA-Asp	complement(265984..266055)	Theileria orientalis strain Shintoku	20714188
TOT_01t000004	tRNA	TOT_01t000004	NC_025260.1	835153	835225	D	tRNA-Thr	835153..835225	Theileria orientalis strain Shintoku	20714178
TOT_01t000005	tRNA	TOT_01t000005	NC_025260.1	859779	859850	D	tRNA-Trp	859779..859850	Theileria orientalis strain Shintoku	20714179
TOT_01t000013	tRNA	TOT_01t000013	NC_025260.1	1354120	1354203	R	tRNA-Leu	complement(1354120..1354203)	Theileria orientalis strain Shintoku	20714187
TOT_01t000012	tRNA	TOT_01t000012	NC_025260.1	1578577	1578648	R	tRNA-Cys	complement(1578577..1578648)	Theileria orientalis strain Shintoku	20714186
TOT_01t000011	tRNA	TOT_01t000011	NC_025260.1	1778678	1778748	R	tRNA-Gly	complement(1778678..1778748)	Theileria orientalis strain Shintoku	20714185
TOT_01t000010	tRNA	TOT_01t000010	NC_025260.1	2370685	2370765	R	tRNA-Leu	complement(2370685..2370765)	Theileria orientalis strain Shintoku	20714184
TOT_01t000009	tRNA	TOT_01t000009	NC_025260.1	2663298	2663370	R	tRNA-Lys	complement(2663298..2663370)	Theileria orientalis strain Shintoku	20714183
TOT_01t000008	tRNA	TOT_01t000008	NC_025260.1	2700066	2700137	R	tRNA-Pro	complement(2700066..2700137)	Theileria orientalis strain Shintoku	20714182
TOT_01t000007	tRNA	TOT_01t000007	NC_025260.1	2700933	2701004	R	tRNA-Pro	complement(2700933..2701004)	Theileria orientalis strain Shintoku	20714181
TOT_01t000006	tRNA	TOT_01t000006	NC_025260.1	2701269	2701340	D	tRNA-Pro	2701269..2701340	Theileria orientalis strain Shintoku	20714180
TOT_02t000001	tRNA	TOT_02t000001	NC_025261.1	141955	142026	D	tRNA-Ala	141955..142026	Theileria orientalis strain Shintoku	20715204
TOT_02t000009	tRNA	TOT_02t000009	NC_025261.1	143102	143173	R	tRNA-Ala	complement(143102..143173)	Theileria orientalis strain Shintoku	20715212
TOT_02t000002	tRNA	TOT_02t000002	NC_025261.1	197700	197772	D	tRNA-Glu	197700..197772	Theileria orientalis strain Shintoku	20715205
TOT_02t000008	tRNA	TOT_02t000008	NC_025261.1	206256	206328	R	tRNA-Glu	complement(206256..206328)	Theileria orientalis strain Shintoku	20715211
TOT_02t000003	tRNA	TOT_02t000003	NC_025261.1	466128	466200	D	tRNA-Ile	466128..466200	Theileria orientalis strain Shintoku	20715206
TOT_02t000007	tRNA	TOT_02t000007	NC_025261.1	640963	641034	R	tRNA-Thr	complement(640963..641034)	Theileria orientalis strain Shintoku	20715210
TOT_02t000004	tRNA	TOT_02t000004	NC_025261.1	750798	750870	D	tRNA-Ala	750798..750870	Theileria orientalis strain Shintoku	20715207
TOT_02t000006	tRNA	TOT_02t000006	NC_025261.1	1096089	1096162	R	tRNA-Arg	complement(1096089..1096162)	Theileria orientalis strain Shintoku	20715209
TOT_02t000005	tRNA	TOT_02t000005	NC_025261.1	1918144	1918215	D	tRNA-Met	1918144..1918215	Theileria orientalis strain Shintoku	20715208
TOT_03t000010	tRNA	TOT_03t000010	NC_025262.1	72276	72349	R	tRNA-Ile	complement(72276..72349)	Theileria orientalis strain Shintoku	20716106
TOT_03t000009	tRNA	TOT_03t000009	NC_025262.1	121010	121082	R	tRNA-Val	complement(121010..121082)	Theileria orientalis strain Shintoku	20716105
TOT_03t000008	tRNA	TOT_03t000008	NC_025262.1	121368	121440	R	tRNA-Val	complement(121368..121440)	Theileria orientalis strain Shintoku	20716104
TOT_03t000001	tRNA	TOT_03t000001	NC_025262.1	525951	526033	D	tRNA-Leu	525951..526033	Theileria orientalis strain Shintoku	20716097
TOT_03t000002	tRNA	TOT_03t000002	NC_025262.1	614401	614473	D	tRNA-Lys	614401..614473	Theileria orientalis strain Shintoku	20716098
TOT_03t000007	tRNA	TOT_03t000007	NC_025262.1	1256322	1256403	R	tRNA-Ser	complement(1256322..1256403)	Theileria orientalis strain Shintoku	20716103
TOT_03t000006	tRNA	TOT_03t000006	NC_025262.1	1256643	1256724	R	tRNA-Ser	complement(1256643..1256724)	Theileria orientalis strain Shintoku	20716102
TOT_03t000003	tRNA	TOT_03t000003	NC_025262.1	1596684	1596755	D	tRNA-Gln	1596684..1596755	Theileria orientalis strain Shintoku	20716099
TOT_03t000004	tRNA	TOT_03t000004	NC_025262.1	1647920	1647993	D	tRNA-Arg	1647920..1647993	Theileria orientalis strain Shintoku	20716100
TOT_03t000005	tRNA	TOT_03t000005	NC_025262.1	1691361	1691432	R	tRNA-Gln	complement(1691361..1691432)	Theileria orientalis strain Shintoku	20716101
TOT_04t000001	tRNA	TOT_04t000001	NC_025263.1	212598	212670	D	tRNA-Arg	212598..212670	Theileria orientalis strain Shintoku	20717014
TOT_04t000002	tRNA	TOT_04t000002	NC_025263.1	322915	322986	D	tRNA-Gly	322915..322986	Theileria orientalis strain Shintoku	20717015
TOT_04t000003	tRNA	TOT_04t000003	NC_025263.1	343507	343586	D	tRNA-Leu	343507..343586	Theileria orientalis strain Shintoku	20717016
TOT_04t000004	tRNA	TOT_04t000004	NC_025263.1	343973	344052	D	tRNA-Leu	343973..344052	Theileria orientalis strain Shintoku	20717017
TOT_04t000013	tRNA	TOT_04t000013	NC_025263.1	536955	537028	R	tRNA-Asn	complement(536955..537028)	Theileria orientalis strain Shintoku	20717026
TOT_04t000012	tRNA	TOT_04t000012	NC_025263.1	937742	937813	R	tRNA-Thr	complement(937742..937813)	Theileria orientalis strain Shintoku	20717025
TOT_04t000005	tRNA	TOT_04t000005	NC_025263.1	1015144	1015216	D	tRNA-Val	1015144..1015216	Theileria orientalis strain Shintoku	20717018
TOT_04t000011	tRNA	TOT_04t000011	NC_025263.1	1025647	1025728	R	tRNA-Ser	complement(1025647..1025728)	Theileria orientalis strain Shintoku	20717024
TOT_04t000006	tRNA	TOT_04t000006	NC_025263.1	1128081	1128154	D	tRNA-Met	1128081..1128154	Theileria orientalis strain Shintoku	20717019
TOT_04t000010	tRNA	TOT_04t000010	NC_025263.1	1268603	1268673	R	tRNA-Gly	complement(1268603..1268673)	Theileria orientalis strain Shintoku	20717023
TOT_04t000009	tRNA	TOT_04t000009	NC_025263.1	1798136	1798217	R	tRNA-Ser	complement(1798136..1798217)	Theileria orientalis strain Shintoku	20717022
TOT_04t000008	tRNA	TOT_04t000008	NC_025263.1	1987115	1987187	R	tRNA-Arg	complement(1987115..1987187)	Theileria orientalis strain Shintoku	20717021
TOT_04t000007	tRNA	TOT_04t000007	NC_025263.1	1987446	1987518	D	tRNA-Arg	1987446..1987518	Theileria orientalis strain Shintoku	20717020
TOT_01r000002	rRNA	TOT_01r000002	NC_025260.1	901418	904760	R	28S ribosomal RNA	complement(901418..904760)	Theileria orientalis strain Shintoku	20714173
TOT_01r000003	rRNA	TOT_01r000003	NC_025260.1	905287	905436	R	5.8S ribosomal RNA	complement(905287..905436)	Theileria orientalis strain Shintoku	20714174
TOT_01r000001	rRNA	TOT_01r000001	NC_025260.1	907074	908821	R	18S ribosomal RNA	complement(907074..908821)	Theileria orientalis strain Shintoku	20714172
TOT_02r000003	rRNA	TOT_02r000003	NC_025261.1	776636	776757	R	5S ribosomal RNA	complement(776636..776757)	Theileria orientalis strain Shintoku	20715203
TOT_02r000002	rRNA	TOT_02r000002	NC_025261.1	783911	784032	R	5S ribosomal RNA	complement(783911..784032)	Theileria orientalis strain Shintoku	20715202
TOT_02r000001	rRNA	TOT_02r000001	NC_025261.1	789217	789338	R	5S ribosomal RNA	complement(789217..789338)	Theileria orientalis strain Shintoku	20715201
TOT_03r000002	rRNA	TOT_03r000002	NC_025262.1	230737	232484	D	18S ribosomal RNA	230737..232484	Theileria orientalis strain Shintoku	20716095
TOT_03r000003	rRNA	TOT_03r000003	NC_025262.1	234119	234268	D	5.8S ribosomal RNA	234119..234268	Theileria orientalis strain Shintoku	20716096
TOT_03r000001	rRNA	TOT_03r000001	NC_025262.1	234794	238136	D	28S ribosomal RNA	234794..238136	Theileria orientalis strain Shintoku	20716094