-- dump date 20240514_000703 -- class Genbank::CDS -- table cds_note -- id note TA17500 TapBAC05a05.q1k.C.cand.2 - score = 17.54 TA17505 TapBAC05a05.q1k.C.cand.1 - score = 157.72; Signal peptide predicted for TA17505 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.887 between residues 25 and 26 TA09760 Tap465h02.q1ca.cand.26 - score = 13.62; SMART pfam:PS_Dcarbxylase (PF02666) at aa 38-209, E()=6.20e-28; 1 probable transmembrane helix predicted for TA09760 by TMHMM2.0 at aa 23-45; Signal anchor predicted for TA09760 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 28 and 29 TA09756 Signal peptide predicted for TA09756 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 18 and 19; GPI-Anchor Signal predicted for TA09756 by DGPI v2.04 with cleavage site probability 1.72 near 145 TA09755 Tap465h02.q1ca.C.cand.2 - score = 9.39; Signal peptide predicted for TA09755 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 20 and 21 TA09750 Tap465h02.q1ca.cand.25 - score = 24.00; SMART CYCLIN (SM0385) at aa 20-112, E()=7.05e-06; 134-225, E()=6.36e-01 TA09745 Tap465h02.q1ca.cand.24 - score = 23.66; SMART RING (SM0184) at aa 218-263, E()=2.74e-02 TA09740 SMART 2 transmembrane domains at aa 431-453 and 461-488; 2 probable transmembrane helices predicted for TA09740 by TMHMM2.0 at aa 431-453 and 466-488 TA09735 Tap465h02.q1ca.C.cand.4 - score = 15.47; SMART pfam:tRNA-synt_1 (PF00133) at aa 57-468, E()=2.10e-05 TA09730 Tap465h02.q1ca.cand.22 - score = 16.94 TA09725 SMART 2 transmembrane domains at aa 95-117 and 179-201; 2 probable transmembrane helices predicted for TA09725 by TMHMM2.0 at aa 95-117 and 179-201 TA09720 Tap465h02.q1ca.C.cand.5 - score = 9.33; 1 probable transmembrane helix predicted for TA09720 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09720 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.925) with cleavage site probability 0.033 between residues 28 and 29 TA09715 Tap465h02.q1ca.C.cand.6 - score = 7.21 TA09710 SMART 2 RRM (SM0360) at aa 536-601, E()=4.49e-17 and 620-689, E()=1.91e-11 TA09705 Tap465h02.q1ca.cand.20 - score = 9.08 TA09700 Tap465h02.q1ca.cand.19 - score = 11.60; SMART RAB (SM0175) at aa 10-174, E()=1.66e-93 TA09695 Tap465h02.q1ca.C.cand.8 - score = 9.09; SMART pfam:Ribosomal_S8 (PF00410) at aa 23-122, E()=7.90e-05 TA09690 Tap465h02.q1ca.C.cand.9 - score = 28.09; SMART MIF4G (SM0543) at aa 101-284, E()-1.24e-24; MA3 (SM0544) at aa 406-511, E()=6.25e-21 TA09685 Tap465h02.q1ca.cand.18 - score = 14.98; SMART 2 RRM (SM0360) at aa 10-78, E()=5.08e-16; 177-249, E()=4.52e-22; WW (SM0456) at aa 125-157, E()=1.32e-08 TA09680 SMART pfam:Exo_endo_phos (PF03372) at aa 5-364, E()=3.10e-23 TA09675 Tap465h02.q1ca.C.cand.10 - score = 15.35; Signal peptide predicted for TA09675 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.965 between residues 17 and 18 TA09670 Tap465h02.q1ca.cand.17 - score = 9.65; Signal peptide predicted for TA09670 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.000) with cleavage site probability 0.519 between residues 20 and 21 TA09665 Tap465h02.q1ca.C.cand.11 - score = 9.54; SMART pfam:ribonuc_red_sm (PF00268) at aa 18-299, E()=3.20e-11; 1 probable transmembrane helix predicted for TA09665 by TMHMM2.0 at aa 175-197 TA09660 SMART pfam:EMP24_GP25L (PF01105) at aa 4.00e-06; 2 probable transmembrane helices predicted for TA09660 by TMHMM2.0 at aa 10-29 and 176-198; Signal peptide predicted for TA09660 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.242) with cleavage site probability 0.670 between residues 23 and 24; GPI-Anchor Signal predicted for TA09660 by DGPI v2.04 with cleavage site probability 0.11019999 near 173 TA09655 Tap465h02.q1ca.C.cand.12 - score = 14.79 TA09650 Tap465h02.q1ca.C.cand.13 - score = 11.97 TA09645 Tap465h02.q1ca.cand.16 - score = 10.16; SMART pfam:BPL_LipA_LipB (PF03099) at aa 52-170, E()=4.30e-15 TA09640 Tap465h02.q1ca.cand.15 - score = 7.21 TA09635 Tap465h02.q1ca.C.cand.14 - score = 19.83 TA09625 SMART pfam:GTP_EFTU (PF00009) at aa 123-280, E()=1.40e-06 TA09620 Tap465h02.q1ca.cand.13 - score = 52.74; SMART PH (SM0233) at aa 749-938, E()=9.43e-01 TA09615 Tap465h02.q1ca.cand.12 - score = 69.10 TA09610 Tap465h02.q1ca.cand.11 - score = 72.47; SMART 3 TPR (SM0028) domains at aa 29-62, E()=8.77e+01; 171-204, E()=2.55e-02; 915-948, E()=3.27e+00 TA09605 SMART SFM (SM0500) at aa 79-121, E()=7.40e-03 and pfam:Prp18 (PF02840) at aa 261-408, E()=9.60e-47 TA09600 SMART 5 transmembrane domains at aa 139-161, 232-250, 371-388, 422-444 and 451-468; 6 probable transmembrane helices predicted for TA09600 by TMHMM2.0 at aa 139-161, 232-250, 371-388, 422-444, 451-468 and 899-921 TA09590 Tap465h02.q1ca.cand.8 - score = 24.51; SMART pfam:ldh (PF00056) at aa 5-198, E()=2.20e-12; pfam:ldh_C (PF02866) at aa 200-366, E()=2.80e-42; high sequence similarity between lactate- and malate- dehydrogenases but distinguished by comparison to respective enzyme sequences from S. pombe TA09585 Tap465h02.q1ca.cand.7 - score = 14.20 TA09580 SMART 2 transmembrane domains aa 15-37 and 156-178 TA09575 Tap465h02.q1ca.cand.6 - score = 50.66 TA09570 SMART 3 EGF (SM0181) domains at aa 23-60, E()=1.00e+01; 78-112, E()=1.47e+01; 117-156, E()=3.57e+01; 1 transmembrane domain at aa 191-213; 1 probable transmembrane helix predicted for TA09570 by TMHMM2.0 at aa 191-213 TA09565 Tap465h02.q1ca.C.cand.17 - score = 16.90; SMART pfam:Acetyltransf (PF00583) at aa 222-304, E()=3.50e-03 TA09560 Tap465h02.q1ca.C.cand.18 - score = 261.97; SMART 2 transmembrane domains at aa 1475-1497, 1510-1532; 2 probable transmembrane helices predicted for TA09560 by TMHMM2.0 at aa 1475-1497 and 1510-1532 TA09555 SMART ANK (SM0248) at aa 895-925, E()=2.39e+02; 930-960, E()=2.92e-02; 964-996, E()=1.21e+01; HECTc (SM0119) at aa 1924-2357, E()=3.76e-13 TA09550 Tap465h02.q1ca.C.cand.19 - score = 14.50 TA09545 Tap465h02.q1ca.cand.4 - score = 18.92; SMART POP4 (SM0538) at aa 159-250, E()=3.42e-13 TA09540 Tap465h02.q1ca.cand.3 - score = 34.74 TA09535 Tap465h02.q1ca.cand.3 - score = 34.74 TA09530 Tap465h02.q1ca.C.cand.20 - score = 14.22; SMART 5 transmembrane domains at aa 51-73, 267-286, 291-313, 325-347 and 362-384; pfam:CDP-OH_P_transf (PF01066) at aa 90-257, E()=1.50e-04; 7 probable transmembrane helices predicted for TA09530 by TMHMM2.0 at aa 51-73, 178-200, 232-254, 267-286, 291-313, 325-347 and 362-384 TA09525 Tap465h02.q1ca.cand.2 - score = 21.57 TA09520 Tap465h02.q1ca.cand.1 - score = 7.05; SMART 1 transmembrane domain at aa 33-55; 1 probable transmembrane helix predicted for TA09520 by TMHMM2.0 at aa 33-55; Signal anchor predicted for TA09520 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.928) with cleavage site probability 0.000 between residues 47 and 48 TA09515 Tap465h02.q1ca.C.cand.21 - score = 45.52; SMART ZnF_U1 (SM0451) at aa 1-37, E()=8.47e-07 TA09510 Tap465h02.q1ca.C.cand.21 - score = 45.52 TA09505 Tap465h02.q1ca.C.cand.21 - score = 45.52 TA16700 Tap821d03.p1c.C.cand.2 - score = 25.82; SMART pfam:DUF529 (PF04385) at aa 28-155, E()=4.50e-07 TA16695 Tap821d03.p1c.cand.110 - score = 89.30; SMART 3 transmembrane domains at aa 183-205, 552-569 and 701-723; STYKc (SM00221) at aa 964-1404, E()=1.34e-04; 3 probable transmembrane helices predicted for TA16695 by TMHMM2.0 at aa 183-205, 552-569 and 701-723 TA16690 SMART KH (SM0322) at aa 165-254, E()=5.44e-09; 2 ZnF_C2H2 (SM0343) at aa 286-302, E()=9.87e-02; 314-330, E()=5.04e-02 TA16680 SMART pfam:DEAD (PF00270) at aa 136-341, E()=2.30e-02; HELICc (SM00490) at aa 355-446, E()=4.81e-15; Signal peptide predicted for TA16680 by SignalP 2.0 HMM (Signal peptide probability 0.916, signal anchor probability 0.000) with cleavage site probability 0.848 between residues 15 and 16; GPI-Anchor Signal predicted for TA16680 by DGPI v2.04, no cleavage site predicted TA16675 Tap821d03.p1c.C.cand.4 - score = 21.73 TA16670 Tap821d03.p1c.C.cand.5 - score = 39.79; SMART 12 transmembrane domains at aa 21-43, 63-82, 89-108, 113-132, 144-166, 179-201, 243-265, 275-297, 310-332, 337-359, 379-398 and 434-456; 12 probable transmembrane helices predicted for TA16670 by TMHMM2.0 at aa 21-43, 63-82, 89-108, 113-132, 144-166, 179-201, 243-265, 275-297, 310-332, 337-359, 379-398 and 434-456 TA16665 SMART pfam:GATase (PF00117) at aa 20-266, E()=9.80e-03 TA16660 Tap821d03.p1c.cand.107 - score = 92.14; SMART transmembrane domain at 41-63; 1 probable transmembrane helix predicted for TA16660 by TMHMM2.0 at aa 41-63 TA16655 Tap821d03.p1c.C.cand.6 - score = 19.79 TA16645 SMART 2 AAA domains at aa 121-256, E()=5.62e-20; 418-568, E()=5.09e-09 TA16640 Tap821d03.p1c.cand.105 - score = 24.41; SMART pfam:DDHD (PF02862) at aa 190-435, E()=5.20e-09 TA16635 Tap821d03.p1c.C.cand.8 - score = 12.68; SMART pfam:sodfe (PF00081) at aa 1-93, E()=1.80e-39; pfam:sodfe_C (PF02777) at aa 97-206, E()=1.60e-36 TA16625 Tap821d03.p1c.C.cand.9 - score = 8.72 TA16620 Tap821d03.p1c.cand.104 - score = 25.13; SMART 2 transmembrane domains at aa 79-96 and 244-266; DnaJ (SM00271) at aa 127-184, E()=2.45e-22; 2 probable transmembrane helices predicted for TA16620 by TMHMM2.0 at aa 79-96 and 244-266 TA16615 SMART 4 transmembrane domains at aa 416-438, 473-495, 560-582 and 592-614; 5 probable transmembrane helices predicted for TA16615 by TMHMM2.0 at aa 20-39, 416-438, 473-495, 560-582 and 592-614 TA16610 Tap821d03.p1c.C.cand.11 - score = 15.88; SMART pfam:Peptidase_M18 (PF02127) at aa 21-475, E()=6.60e-115; pfam:Peptidase_M42 (PF05343) at aa 170-470, E()=6.30e-02 TA16605 Tap821d03.p1c.cand.101 - score = 30.82; SMART 1 transmembrane domain at aa 324-346; 1 probable transmembrane helix predicted for TA16605 by TMHMM2.0 at aa 324-346 TA16600 Tap821d03.p1c.C.cand.12 - score = 19.17; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA16600 by TMHMM2.0 at aa 5-27 TA16595 Tap821d03.p1c.cand.100 - score = 179.37; SMART 4 pfam:DUF529 (PF04385) at aa 171-317, E()=2.20e-38; 363-501, E()=2.30e-76; 566-704, E()=2.40e-75; 789-929, E()=2.40e-51 TA16590 SMART pfam:Syja_N (PF02383) at aa 75-426, E()=3.00e-15; IPPc (SM00128) at aa 1.59e-22 TA16585 Tap821d03.p1c.C.cand.14 - score = 21.44; SMART DEXDc (SM00487) at aa 87-346, E()=1.55e-03; pfam:helicase_C (PF00271) at aa 415-485, E()=1.80e-02 TA16580 Tap821d03.p1c.cand.99 - score = 21.06; Signal peptide predicted for TA16580 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.579 between residues 17 and 18 TA16565 Tap821d03.p1c.cand.98 - score = 18.91; Signal peptide predicted for TA16565 by SignalP 2.0 HMM (Signal peptide probability 0.884, signal anchor probability 0.000) with cleavage site probability 0.376 between residues 17 and 18; GPI-Anchor Signal predicted for TA16565 by DGPI v2.04 with cleavage site probability 0.152 near 202 TA16560 Tap821d03.p1c.cand.97 - score = 17.77; SMART IPPc (SM0128) at aa 22-376, E()=2.99e-07 TA16555 Tap821d03.p1c.C.cand.15 - score = 24.65; SMART 1 transmembrane domain at aa 368-390; 1 probable transmembrane helix predicted for TA16555 by TMHMM2.0 at aa 368-390 TA16550 Tap821d03.p1c.C.cand.16 - score = 17.31; SMART 10 transmembrane domains at aa 12-31, 51-73, 93-115, 125-147, 189-211, 231-253, 266-284, 314-336, 356-378 and 388-410; 10 probable transmembrane helices predicted for TA16550 by TMHMM2.0 at aa 12-31, 51-73, 93-115, 125-147, 189-211, 231-253, 266-284, 314-336, 356-378 and 388-410 TA16545 Tap821d03.p1c.cand.96 - score = 10.41; SMART pfam:Acylphosphatase (PF00708) at aa 3-91, E()=1.20e-16 TA16540 Tap821d03.p1c.C.cand.17 - score = 12.59; SMART PTPc_DSPc (SM00012) at aa 10-155, E()=1.09e-01 TA16535 Tap821d03.p1c.C.cand.18 - score = 44.72 TA16530 Tap821d03.p1c.C.cand.19 - score = 31.28; SMART UBQ (SM00213) at aa 3-74, E()=5.71e-23; 2 STI1 (SM00727) domains at aa 137-167, E()=2.37e+00; 171- 206, E()=3.71e+00; UBA (SM00165) at aa 278-316, E()=1.34e- 06 TA16525 Tap821d03.p1c.cand.94 - score = 10.73; SMART 3 transmembrane domains at aa 19-36, 51-73 and 164-182; pfam:DUF250 (PF03151) at aa 204-372, E()=1.90e-02; pfam:DUF6 (PF00892) at aa 230-360, E()=2.20e- 06; 9 probable transmembrane helices predicted for TA16525 by TMHMM2.0 at aa 19-36, 51-73, 164-182, 187-206, 219-238, 253-275, 287-309, 314-336 and 343-361; Signal anchor predicted for TA16525 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 33 and 34 TA16520 Tap821d03.p1c.C.cand.21 - score = 23.26; SMART pfam:UFD1 (PF03152) at aa 156-318, E()=7.40e-07; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA16520 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.032) with cleavage site probability 0.595 between residues 29 and 30 TA16515 Tap821d03.p1c.C.cand.22 - score = 45.64 TA16510 Tap821d03.p1c.C.cand.23 - score = 17.54; SMART pfam:OMPdecase (PF00215) at aa 60-282, E()7.60e-10 TA16505 Tap821d03.p1c.cand.93 - score = 158.47; SMART DEXDc (SM00487) at aa 787-979, E()=2.88e-36; HELICc (SM00490) at aa 1436-1519, E()=1.10e-23 TA16500 Tap821d03.p1c.cand.92 - score = 56.58 TA16495 Tap821d03.p1c.C.cand.24 - score = 9.92 TA16490 Tap821d03.p1c.C.cand.25 - score = 52.25; SMART pfam:Ribosomal_L23 (PF00276) at aa 17-111, E()=1.80e-07 TA16485 Tap821d03.p1c.C.cand.26 - score = 46.59 TA16480 Tap821d03.p1c.cand.91 - score = 12.07 TA16475 Tap821d03.p1c.C.cand.27 - score = 76.72; SMART HATPase_c (SM00387) at aa 131-315, E()=5.52e-16; TOP2c (SM00433) at aa 135-913, E()=1.17e-142 TA16470 Tap821d03.p1c.cand.90 - score = 31.41 TA16460 Tap821d03.p1c.C.cand.28 - score = 78.41; SMART 1 transmembrane domain at aa 159-181; AAA (SM00382) at aa 263-403, E()=5.27e-25; pam:Peptidase_M41 (PF01434) at aa 461-666, E()=3.80e-73; 1 probable transmembrane helix predicted for TA16460 by TMHMM2.0 at aa 159-181 TA16455 Tap821d03.p1c.cand.88 - score = 56.83; SMART pfam:Vsp16_N (PF04841) at aa 1-480, E()=1.70e-02; pfam:Vsp16_C (PF04840) at aa 616-925, E()=7.20e-05 TA16450 Tap821d03.p1c.cand.87 - score = 33.65; SMART 7 WD40 (SM00320) domains, at aa 68-111, E()=1.10e+01; 116-155, E()=2.57e+00; 159-198, E()=2.30e+00; 205-243, E()=3.64e-02; 246-285, E()=2.93e- 06; 313-352, E()=7.64e+01; 360-399, E()=8.04e-04 TA16445 Tap821d03.p1c.cand.86 - score = 28.37; SMART pfam:Ribosomal_L1 (PF00687) at aa 128-346, E()=1.80e-10 TA16440 Tap821d03.p1c.C.cand.29 - score = 55.09 TA16435 Tap821d03.p1c.C.cand.30 - score = 26.33 TA16430 Tap821d03.p1c.C.cand.31 - score = 15.93 TA16425 Tap821d03.p1c.cand.84 - score = 19.49 TA16420 Tap821d03.p1c.C.cand.32 - score = 18.69; Signal peptide predicted for TA16420 by SignalP 2.0 HMM (Signal peptide probability 0.671, signal anchor probability 0.000) with cleavage site probability 0.640 between residues 17 and 18 TA16415 Tap821d03.p1c.cand.83 - score = 57.77; SMART pfam:DUF408 (PF04181) at aa 158-339, E()=6.20e-03 TA16400 Tap821d03.p1c.cand.82 - score = 47.24; SMART pfam:cpn60_TCP1 (PF00118) at aa 36-537, E()=3.20e-139 TA16395 Tap821d03.p1c.C.cand.33 - score = 13.64 TA16390 Tap821d03.p1c.cand.81 - score = 22.41 TA16385 Tap821d03.p1c.C.cand.34 - score = 61.36 TA16380 Tap821d03.p1c.cand.80 - score = 22.18; SMART RING (SM00184) at aa 237-275, E()=8.56e-06 TA16375 Tap821d03.p1c.cand.79 - score = 58.28 TA16370 Tap821d03.p1c.cand.78 - score = 46.08; SMART 9 transmembrane domains at aa 95-117, 159-181, 248-270, 285-307, 442-464, 507-529, 575-597, 612-634 and 737-759; 9 probable transmembrane helices predicted for TA16370 by TMHMM2.0 at aa 95-117, 159-181, 248-270, 285-307, 442-464, 507-529, 575-597, 612-634 and 737-759 TA16365 Tap821d03.p1c.cand.77 - score = 102.13; SMART 2 pfam:RCC1 (PF00415) domains at aa 111-173, E()=2.20e-02; and aa 176-226, E()=4.40e-05 TA16360 Tap821d03.p1c.cand.77 - score = 102.13; SMART pfam:Myosin_N (PF02736) at aa 38-81, E()=1.10e-03; MYSc (SM00242) at aa 84-802, E()=2.64e-186; 4 IQ (SM00015) domains, at aa 875-897, E()=6.16e-02; 940-962, E()=3.35e-03; 969-991, E()=3.68e+00; 995-1017, E()=8.00e-01 TA16355 Tap821d03.p1c.C.cand.35 - score = 22.72 TA16345 Tap821d03.p1c.C.cand.36 - score = 35.90; SMART STYKc (SM00221) at aa 263-485, E()=1.98e+00 TA16340 Tap821d03.p1c.C.cand.37 - score = 41.33; SMART ArfGap (SM00105) at aa 21-141, E()=1.03e-21 TA16335 Tap821d03.p1c.cand.76 - score = 17.95; SMART pfam:pro_isomerase (PF00160) at aa 27-205, E()=1.10e-60 TA16330 Tap821d03.p1c.cand.75 - score = 78.60; SMART 2 pfam:PseudoU_synth1 (PF01416) domains at aa 73-226, E()=5.10e-09 and at 302-408, 3.70e-07 TA16325 Tap821d03.p1c.cand.75 - score = 78.60; SMART pfam:ATP-bind (PF03029) at aa 1-242, E()=8.10e-66 TA16320 Tap821d03.p1c.cand.75 - score = 78.60; SMART 3 pfam:mito_carr (PF00153) domains at aa 26-116, E()=1.30e-24; 125-217, E()=7.50e-05; 228-31, E()=2.40e-05 TA16315 Tap821d03.p1c.cand.74 - score = 33.27; SMART pfam:pro_isomerase (PF00160) at aa 8-202, E()=4.30e-21 TA16310 SMART KISc (SM00129) at aa 371-699, E()=4.95e-92 TA16305 Tap821d03.p1c.C.cand.38 - score = 29.86; SMART pfam:EF1BD (PF00736) at aa 127-240, E()=2.50e-15 TA16300 Tap821d03.p1c.cand.72 - score = 33.72 TA16295 Tap821d03.p1c.C.cand.39 - score = 59.28; SMART aminotran_5 (PF00266) at aa 74-445, E()=1.30e-08 TA16290 Tap821d03.p1c.C.cand.39 - score = 59.28 TA16285 Tap821d03.p1c.C.cand.40 - score = 15.85; SMART 10 transmembrane domains at aa 21-40, 111-133, 145-167, 172-194, 207-229, 259-281, 294-312, 335-357, 378-400and 410-432; 10 probable transmembrane helices predicted for TA16285 by TMHMM2.0 at aa 21-40, 111-133, 145-167, 172-194, 207-229, 259-281, 294-312, 335-357, 378-400 and 410-432 TA16280 Tap821d03.p1c.C.cand.41 - score = 51.80; SMART 11 transmembrane domains at aa 20-39, 504-526, 533-555, 560-582, 595-617, 653-675, 688-706, 739-761, 782-804, 814-836, 871-893; 11 probable transmembrane helices predicted for TA16280 by TMHMM2.0 at aa 20-39, 504-526, 533-555, 560-582, 595-617, 653-675, 688-706, 739-761, 782-804, 814-836 and 871-893 TA16275 Tap821d03.p1c.cand.71 - score = 31.15; SMART 5 WD40 (SM00320) domains at aa 1-38, E()=1.07e+00; 41-80, E()=2.44e-03; 144-183, E()=1.98e+01; 200-239, E()=9.52e-06; 304-343, E()=1.55e-05 TA16270 Tap821d03.p1c.cand.70 - score = 58.73; Signal peptide predicted for TA16270 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.630 between residues 25 and 26 TA16265 Tap821d03.p1c.cand.69 - score = 28.31; SMART pfam:PDCD2_C (PF04194) at aa 171-361, E()=3.30e-09 TA16260 Tap821d03.p1c.C.cand.42 - score = 23.55 TA16255 Tap821d03.p1c.cand.68 - score = 90.31; SMART pfam:GTP_EFTU (PF00009) at aa 12-333, E()=9.00e-61; pfam:EFG_C (PF00679) at aa 1081-1170, E()=6.00e-17 TA16250 Tap821d03.p1c.cand.67 - score = 16.82; Signal peptide predicted for TA16250 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.178) with cleavage site probability 0.328 between residues 30 and 31 TA16235 Tap821d03.p1c.C.cand.43 - score = 29.31; SMART pfam:NAP (PF00956) at aa 30-219, E()=1.80e-09 TA16230 Tap821d03.p1c.cand.66 - score = 44.32 TA16225 Tap821d03.p1c.cand.65 - score = 25.08; SMART pfam:Hydrolase (PF00702) at aa 10-243, E()=4.50e-03 TA16220 Tap821d03.p1c.cand.64 - score = 23.63; 1 probable transmembrane helix predicted for TA16220 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA16220 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.008) with cleavage site probability 0.977 between residues 26 and 27 TA16215 Tap821d03.p1c.cand.63 - score = 19.62; SMART pfam:Hydrolase (PF00702) at aa 33-267, E()=1.20e-02; Signal peptide predicted for TA16215 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.000) with cleavage site probability 0.934 between residues 20 and 21 TA16210 SMART 1 transmembrane domain at aa 91-113; 1 probable transmembrane helix predicted for TA16210 by TMHMM2.0 at aa 91-113; GPI-Anchor Signal predicted for TA16210 by DGPI v2.04, no cleavage site predicted TA16205 Tap821d03.p1c.C.cand.44 - score = 22.81; Signal peptide predicted for TA16205 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 21 and 22 TA16200 Signal peptide predicted for TA16200 by SignalP 2.0 HMM (Signal peptide probability 0.812, signal anchor probability 0.000) with cleavage site probability 0.526 between residues 17 and 18 TA16195 Tap821d03.p1c.cand.61 - score = 23.28; SMART pfam:Hydrolase (PF00702) at aa 29-263, E()=4.00e-02; Signal peptide predicted for TA16195 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17 TA16190 Tap821d03.p1c.cand.60 - score = 24.07; Signal peptide predicted for TA16190 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.005) with cleavage site probability 0.746 between residues 16 and 17 TA16185 SMART pfam:Hydrolase (PF00702) at aa 14-249, E()=1.60e-02 TA16180 Tap821d03.p1c.cand.58 - score = 48.05; SMART S_TKc (SM00220) at aa 50-307, E()=8.70e-106; 4 EFh (SM00054) domains at aa 357-385, E()=4.06e-02; 404-432, E()=4.74e-03; 440-468, E()=4.60e-01; 474-502, E()=1.53e-06 TA16175 Tap821d03.p1c.cand.57 - score = 82.19; SMART pfam:TGT (PF01702) at aa 128-368, E()=1.50e-102 TA16170 SMART TFIIE (SM00531) at aa 45-204, E()=1.49e-03 TA16165 Tap821d03.p1c.C.cand.45 - score = 7.87; SMART UBQ (SM00213) at aa 1-72, E()=4.28e-36; ZnF_NFX (SM0043) at aa 110-120, E()=0.00e+00; pfam:Ribosomal_L40e (PF01020) at aa 77-128, E()=3.20e-29 TA16160 Tap821d03.p1c.C.cand.46 - score = 29.09; SMART pfam:sugar_tr (PF00081) at aa 12-473, E()=2.80e-34; 12 probable transmembrane helices predicted for TA16160 by TMHMM2.0 at aa 7-29, 58-80, 92-114, 118-140, 147-169, 189-211, 279-301, 316-338, 345-363, 378-400, 413-435 and 440-462; Signal peptide predicted for TA16160 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.018) with cleavage site probability 0.293 between residues 24 and 25 TA16155 Tap821d03.p1c.C.cand.47 - score = 17.70; SMART HATPase_c (SM00387) at aa 18-133, E()=1.02e-01 TA16150 SMART 5 transmembrane domains at aa 63-82, 103-125, 140-170, 226-245 and 260-282; 5 probable transmembrane helices predicted for TA16150 by TMHMM2.0 at aa 63-82, 103-125, 140-170, 226-245 and 260-282 TA16145 Tap821d03.p1c.cand.53 - score = 24.75; SMART pfam:DnaJ (PF00226) at aa 58-126, E()=4.00e-03; 5 transmembrane domains at aa 5-27, 138-160 173-195, 210-232 and 333-355; 5 probable transmembrane helices predicted for TA16145 by TMHMM2.0 at aa 5-27, 138-160, 173-195, 210-232 and 333-355; Signal peptide predicted for TA16145 by SignalP 2.0 HMM (Signal peptide probability 0.636, signal anchor probability 0.002) with cleavage site probability 0.267 between residues 16 and 17; GPI-Anchor Signal predicted for TA16145 by DGPI v2.04, no cleavage site predicted TA16140 Tap821d03.p1c.C.cand.48 - score = 58.70 TA17100 Tap821d03.p1c.cand.52 - score = 23.99 TA17095 Tap821d03.p1c.C.cand.49 - score = 44.21; SMART SANT (SM00717) at aa 209-263, E()=2.74e-02; ZnF_NFX (SM00438) at aa 476-496, E()=0.00e+00; 1 transmembrane domain at aa 600-622; 1 probable transmembrane helix predicted for TA17095 by TMHMM2.0 at aa 600-622 TA17090 Tap821d03.p1c.C.cand.50 - score = 128.10; SMART pfam:Noti (PF04054) at aa 1377-1760, E()=1.00e-06 TA17085 Tap821d03.p1c.C.cand.51 - score = 60.96; SMART WW (SM00456) at aa 13-45, E()=8.47e-07; pfam:FF (PF01846) at aa 64-112, E()=3.60e-05 TA17080 Tap821d03.p1c.C.cand.51 - score = 60.96 TA17075 Tap821d03.p1c.cand.49 - score = 44.54 TA17070 Tap821d03.p1c.C.cand.52 - score = 117.86 TA17065 SMART 2 SANT (SM00717) at aa 6-55, E()=1.62e-13; 58-105, E()=3.32e-10 TA17060 Tap821d03.p1c.C.cand.53 - score = 45.89 TA17055 Tap821d03.p1c.C.cand.54 - score = 13.99; Signal peptide predicted for TA17055 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.001) with cleavage site probability 0.417 between residues 16 and 17 TA17050 Tap821d03.p1c.cand.48 - score = 27.39; SMART pfam:EMA (PF02408) at aa 1-280, E()=1.40e-191; 1 probable transmembrane helix predicted for TA17050 by TMHMM2.0 at aa 261-280; Signal peptide predicted for TA17050 by SignalP 2.0 HMM (Signal peptide probability 0.995, signal anchor probability 0.002) with cleavage site probability 0.953 between residues 22 and 23; GPI-Anchor Signal predicted for TA17050 by DGPI v2.04 with cleavage site probability 1.1019999 near 247 TA17045 Tap821d03.p1c.C.cand.55 - score = 31.14 TA17040 Tap821d03.p1c.cand.46 - score = 31.98; SMART ZnF_NFX (SM00438) at aa 144-163, E()=0.00e+00 TA17035 Tap821d03.p1c.cand.45 - score = 65.46; SMART pfam:GST_C (PF00043) at aa 56-172, E()=1.90e-03; pfam:tRNA-synt_1c (PF00749) at aa 214-520, E()=4.20e-131; pfam:tRNA-synt-1c_C (PF03950) at aa 522-696, E()=1.90e-35 TA17030 Tap821d03.p1c.C.cand.56 - score = 21.14; SMART pfam:RNase_PH (PF01138) at aa 15-135, E()=1.40e-06 TA17025 Tap821d03.p1c.C.cand.57 - score = 21.90; SMART pfam:Ribosomal_L2 (PF00181) at aa 11-90, E()=3.20e-22; pfam:Ribosomal_L2_C (PF03947) at aa 96-231, E()=6.70e-64 TA17020 Tap821d03.p1c.C.cand.58 - score = 80.20; SMART pfam:aconitase (PF00330) at aa 79-586, E()=2.90e-210; pfam:Aconitase_C (PF00694) at aa 716-898, E()=1.30e-62 TA17015 Tap821d03.p1c.cand.44 - score = 21.90; SMART 9 transmembrane domains at aa 30-52, 143-165, 175-197, 239-261, 291-313, 326-344, 395-417, 438-460 and 470-492; 9 probable transmembrane helices predicted for TA17015 by TMHMM2.0 at aa 30-52, 143-165, 175-197, 239-261, 291-313, 326-344, 395-417, 438-460 and 470-492 TA17010 Tap821d03.p1c.cand.43 - score = 87.19; SMART pfam:Patatin (PF01734) at aa 78-279, E()=2.80e-05 TA17005 Tap821d03.p1c.cand.43 - score = 87.19 TA17000 Tap821d03.p1c.C.cand.59 - score = 14.44 TA16995 Tap821d03.p1c.cand.42 - score = 40.81; SMART pfam:Euk_porin (PF01459) at aa 101-375, E()=8.40e-06 TA16990 Tap821d03.p1c.cand.41 - score = 65.19; SMART pfam:GTP_EFTU (PF00009) at aa 106-289, E()=2.70e-52; pfam:ras (PF00071) at aa 120-287, E()=9.50e-03; pfam:ParA (PF00991) at aa 140-242, E()=7.80e-02; pfam:GTP_EFTU_D2 (PF03144) at aa 319-394, E()=1.40e-02; pfam:EFG_C (PF00679) at aa 520-621, E()=1.30e-14 TA16985 Tap821d03.p1c.C.cand.61 - score = 156.85; SMART pfam:TNFR_c6 (PF00020) at aa 1058-1092, E()=2.80e-02; 3 EGF (SM00181) domains at aa 1489-1538, E()=4.83e+01; aa 1612-1682, E()=4.74e+01; aa 1720-1760, E()=4.83e+01; 8 transmembrane domains at aa 1770-1792, 1799-1821, 1877-1899, 2023-2045, 2073-2095, 2102-2121, 2141-2160 and 2167-2189; 8 probable transmembrane helices predicted for TA16985 by TMHMM2.0 at aa 1770-1792, 1799-1821, 1877-1899, 2023-2045, 2073-2095, 2102-2121, 2141-2160 and 2167-2189 TA16980 Tap821d03.p1c.cand.40 - score = 150.90; SMART KR (SM00130) at aa 269-336, E()=2.14e-02; 5 EGF (SM00181) domains, at aa 1309-1368, E()=4.37e+01; 1369-1426, E()=7.23e+01; 17521801, E()=4.83e+01; 1875-1925, E()=4.74e+01; 1983-2023, E()=4.83e+01; ZnF_NFX (SM00438) at aa 1540-1579, E()=0.00e+00; 8 transmembrane domains at aa 2033-2055, 2062-2084, 2140-2162, 2286-2308, 2336-2358, 2363-2385, 2405-2422 and 2429-2451; 8 probable transmembrane helices predicted for TA16980 by TMHMM2.0 at aa 2033-2055, 2062-2084, 2140-2162, 2286-2308, 2336-2358, 2363-2385, 2405-2422 and 2429-2451 TA16975 Tap821d03.p1c.cand.39 - score = 28.44; SMART pfam:CLP_protease (PF00574) at aa 15-208, E()=1.20e-69 TA16970 Tap821d03.p1c.cand.39 - score = 28.44; SMART UBQ (SM00213) at aa 19-30, E()=3.50e-09 TA16965 Tap821d03.p1c.cand.38 - score = 99.86 TA16960 Tap821d03.p1c.C.cand.62 - score = 34.15 TA16955 Tap821d03.p1c.C.cand.63 - score = 11.92 TA16950 Tap821d03.p1c.cand.37 - score = 22.94 TA16945 SMART SANT (SM00213) at aa 19-30, E()=3.50e-09 TA16935 Tap821d03.p1c.cand.36 - score = 48.72; SMART RRM (SM00360) at aa 14-87, E()=4.81e-26 TA16930 Tap821d03.p1c.cand.35 - score = 32.38; SMART pfam:AAR2 (PF05282) at aa 1-424, E()=1.10e-04 TA16925 Tap821d03.p1c.cand.34 - score = 103.92; Tap821d03.p1c.cand.34 - score = 103.92; SMART 3 WD40 (SM00320) domains, at aa 168-206, E()=8.96e-02; 209-255, E()=1.46e-01; 745-785, E()=1.07e+00; pfam:PHD (PF00628) at aa 1275-1336; BROMO (SM00297) at aa 1567-1668, E()=8.72e-04 TA16920 Tap821d03.p1c.cand.33 - score = 23.11; Tap821d03.p1c.cand.33 - score = 23.11; SMART STYKc (SM00221) at aa 12-273, E()=2.31e+00 TA16915 Tap821d03.p1c.C.cand.65 - score = 30.85; SMART 6 WD40 (SM00320) domains at aa 31-70, E()=2.28e+02; 73-112, E()=3.68e+01; 115-154, E()=1.40e-03; 157-197, E()=1.75e-04; 201-238, E()=2.23e-01; 242-281, E()=3.71e-01 TA16910 Tap821d03.p1c.cand.32 - score = 20.58 TA16905 Tap821d03.p1c.C.cand.66 - score = 25.07; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA16905 by TMHMM2.0 at aa 5-27 TA16900 Tap821d03.p1c.cand.31 - score = 36.43; SMART 10 transmembrane domains at aa 12-34, 364-386, 393-415, 420-442, 455-477, 497-519, 526-548, 582-604, 625-644 and 654-686; 10 probable transmembrane helices predicted for TA16900 by TMHMM2.0 at aa 12-34, 364-386, 393-415, 420-442, 455-477, 497-519, 526-548, 582-604, 625-644 and 654-676 TA16895 Tap821d03.p1c.cand.30 - score = 24.73; SMART 11 transmembrane domains at aa 20-39, 221-243, 253-275, 282-304, 319-341, 353-375, 379-401, 406-428, 453-475, 496-515 and 525-547; 11 probable transmembrane helices predicted for TA16895 by TMHMM2.0 at aa 20-39, 221-243, 253-275, 282-304, 319-341, 353-375, 379-401, 406-428, 453-475, 496-515 and 525-547; Signal anchor predicted for TA16895 by SignalP 2.0 HMM (Signal peptide probability 0.022, signal anchor probability 0.834) with cleavage site probability 0.006 between residues 41 and 42 TA16890 SMART pfam:tRNA-synt_1d (PF00750) at aa 84-496, E()=1.80e-10 TA16885 Tap821d03.p1c.cand.28 - score = 20.03; SMART pfam:Ribosomal_L10 (PF00466) at aa 17-127, E()=3.80e-02 TA16880 Tap821d03.p1c.C.cand.67 - score = 23.12; SMART 1 transmembrane domain at aa 31-53; RING (SM00184) at aa 382-418, E()=1.79e-06; 1 probable transmembrane helix predicted for TA16880 by TMHMM2.0 at aa 31-53; Signal anchor predicted for TA16880 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.903) with cleavage site probability 0.001 between residues 55 and 56 TA16875 Tap821d03.p1c.C.cand.68 - score = 13.93; SMART 11 transmembrane domains at aa 10-32, 52-74, 89-111, 118-140, 155-173, 180-202, 222-244, 257-279, 328-350, 370-392, 396-418; 11 probable transmembrane helices predicted for TA16875 by TMHMM2.0 at aa 10-32, 52-74, 89-111, 118-140, 155-173, 180-202, 222-244, 257-279, 328-350, 370-392 and 396-418 TA16870 Tap821d03.p1c.C.cand.69 - score = 37.06; SMART 9 transmembrane domains at aa 47-69, 90-112, 122-144, 151-173, 188-210, 273-295, 604-626, 647-669, 674-693; 9 probable transmembrane helices predicted for TA16870 by TMHMM2.0 at aa 47-69, 90-112, 122-144, 151-173, 188-210, 273-295, 604-626, 647-669 and 674-693 TA16865 Tap821d03.p1c.cand.27 - score = 77.45 TA16860 SMART 4 transmembrane domains at aa 33-55, 75-97, 17-139, 274-296; 4 probable transmembrane helices predicted for TA16860 by TMHMM2.0 at aa 33-55, 75-97, 117-139 and 274-296; Signal anchor predicted for TA16860 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 53 and 54 TA16855 Tap821d03.p1c.C.cand.71 - score = 52.16; SMART DEXDc (SM00487) at aa 78-262, E()=9.96e-31; AAA (SM00382) at aa 2.02e-03; HELICc (SM00490) at aa 310-407, E()=1.18e-14; pfam:HA2 (PF04408) at aa 466-560 E()=1.80e-37 TA16850 Tap821d03.p1c.cand.26 - score = 51.28; SMART DnaJ (SM00271) at aa 499-518, E()=3.43e+00 TA16845 Tap821d03.p1c.C.cand.72 - score = 29.22; SMART pfam:ThiF (PF00899) at aa 119-255, E()=3.70e-49; pfam:MoeZ_MoeB (PF05237) at aa 294-397, E()=8.10e-13; pfam:Rhodanese (PF00581) at aa 437-538, E()=2.10e-02 TA16840 Tap821d03.p1c.cand.25 - score = 14.28; SMART pfam:ATP-bind (PF03029) at aa 5-233, E()=1.30e-70 TA16835 Tap821d03.p1c.cand.24 - score = 8.46 TA16830 Tap821d03.p1c.C.cand.73 - score = 16.70; SMART 1 transmembrane domain at aa 284-306; 2 pfam:MtN3_slv (PF03083) domains at aa 158-253, E()=1.80e-05; 326-413, E()=1.50e-05; 7 probable transmembrane helices predicted for TA16830 by TMHMM2.0 at aa 158-180, 201-223, 238-272, 284-306, 311-333, 364-382 and 386-408; Signal peptide predicted for TA16830 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.901 between residues 16 and 17 TA16825 SMART ACTIN (SM00268) at aa 2-468, E()=2.35e-19 TA16820 Tap821d03.p1c.cand.23 - score = 32.11; Signal peptide predicted for TA16820 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.002) with cleavage site probability 0.811 between residues 17 and 18 TA16815 Tap821d03.p1c.cand.22 - score = 43.92; SMART pfam:DUF654 (PF04910) at aa 217-595, E()=9.90e-04 TA16810 Tap821d03.p1c.cand.21 - score = 27.27; SMART pfam:PseudoU_synth_2 (PF00849) at aa 144-323, E()=3.20e-33 TA16805 Tap821d03.p1c.C.cand.75 - score = 62.54 TA16800 Tap821d03.p1c.C.cand.75 - score = 62.54; SMART 1 transmembrane domain at aa 112-134; CPDc (SM00577) at aa 183-309, E()=1.05e-21; 1 probable transmembrane helix predicted for TA16800 by TMHMM2.0 at aa 112-134 TA16795 Tap821d03.p1c.cand.20 - score = 41.34; SMART 9 transmembrane domains at aa 346-368, 375-397, 402-424, 437-459, 479-501, 508-530, 564-586, 606-628 and 634-656; 9 probable transmembrane helices predicted for TA16795 by TMHMM2.0 at aa 346-368, 375-397, 402-424, 437-459, 479-501, 508-530, 564-586, 606-628 and 634-656 TA16790 Tap821d03.p1c.cand.19 - score = 103.70; SMART 10 transmembrane domains at aa 20-39, 505-527, 534-556, 561-583, 596-618, 654-676, 689-711, 740-762, 783-805 and 815-837; 10 probable transmembrane helices predicted for TA16790 by TMHMM2.0 at aa 20-39, 505-527, 534-556, 561-583, 596-618, 654-676, 689-711, 740-762, 783-805 and 815-837 TA16785 Tap821d03.p1c.cand.19 - score = 103.70; SMART pfam:dor1 (PF04124) at aa 3-354, E()=3.30e-02; pfam:Vps53_n (PF04100) at aa 14-423, E()=4.50e-13 TA16780 Tap821d03.p1c.C.cand.76 - score = 78.15; SMART pfam:tRNA-synt_2c (PF01411) at aa 81-821, E()=1.90e-293; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA16780 by TMHMM2.0 at aa 2-24; Signal peptide predicted for TA16780 by SignalP 2.0 HMM (Signal peptide probability 0.620, signal anchor probability 0.295) with cleavage site probability 0.492 between residues 22 and 23 TA16775 SMART WD40 (SM00320) at aa 222-263, E()=1.92e-01; 267-309, E()=4.44e+00 TA16770 Tap821d03.p1c.C.cand.77 - score = 65.55; or 7, fibronectin/fibrinogen-binding protein, putative; but no relevant pfam hit TA16765 Tap821d03.p1c.cand.18 - score = 16.91; SMART 10 transmembrane domains, at aa 20-42, 118-140, 147-169, 173-195, 216-238, 268-290, 303-325, 376-398, 419-441 and 451-473; 9 probable transmembrane helices predicted for TA16765 by TMHMM2.0 at aa 85-107, 114-136, 140-162, 183-205, 235-257, 270-292, 343-365, 386-408 and 418-440 TA16760 Tap821d03.p1c.cand.17 - score = 37.49 TA16755 Tap821d03.p1c.C.cand.79 - score = 48.88 TA16750 Tap821d03.p1c.cand.16 - score = 36.05; Signal peptide predicted for TA16750 by SignalP 2.0 HMM (Signal peptide probability 0.739, signal anchor probability 0.018) with cleavage site probability 0.560 between residues 23 and 24 TA16745 Tap821d03.p1c.C.cand.80 - score = 17.34; SMART pfam:Rad10 (PF03834) at aa 10-76, E()=4.50e-20 TA16740 Tap821d03.p1c.C.cand.81 - score = 18.75 TA16735 Tap821d03.p1c.C.cand.82 - score = 29.23; SMART 11 transmembrane domains at aa 12-31, 41-61, 68-90, 94-113, 126-148, 158-180, 237-259, 279-301, 308-325, 340-362 and 764-786; 11 probable transmembrane helices predicted for TA16735 by TMHMM2.0 at aa 12-31, 41-61, 68-90, 94-113, 126-148, 158-180, 237-259, 279-301, 308-325, 340-362 and 764-786; Signal anchor predicted for TA16735 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.936) with cleavage site probability 0.001 between residues 37 and 38 TA16730 Tap821d03.p1c.C.cand.83 - score = 23.41; SMART pfam:Pribosyltran (PF00156) at aa 149-294, E()=8.10e-24 TA16725 Tap821d03.p1c.cand.14 - score = 9.91; SMART Sm (SM00651) at aa 8-72, E()=1.37e-09 TA16720 Tap821d03.p1c.cand.13 - score = 18.17; SMART 1 transmembrane domain, at aa 217-239; 1 probable transmembrane helix predicted for TA16720 by TMHMM2.0 at aa 217-239 TA16715 Tap821d03.p1c.C.cand.84 - score = 13.21; SMART pfam:PH (PF00169) at aa 133-233, E()=5.50e-03 TA16710 Tap821d03.p1c.cand.12 - score = 45.77; SMART pfam:Tfb2 (PF03849) at aa 27-514, E()=5.80e-14 TA16685 Tap821d03.p1c.cand.11 - score = 75.80; Signal peptide predicted for TA16685 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.755 between residues 21 and 22; GPI-Anchor Signal predicted for TA16685 by DGPI v2.04, no cleavage site predicted TA16630 Tap821d03.p1c.cand.10 - score = 33.65; SMART WD40 (SM00320) at aa 19-58, E()=7.13e+00; 130-169, E()=3.08e+00; 223-261, E()=2.12e+02 TA16575 Tap821d03.p1c.cand.9 - score = 31.64; SMART 1 transmembrane domain at 417-434; ZnF_NFX (SM00438) at aa 104-115, E()=0.00e+00; TSP1 (SM00209) at aa 200-245, E()=1.82e-07; 1 probable transmembrane helix predicted for TA16575 by TMHMM2.0 at aa 417-434 TA16570 Tap821d03.p1c.C.cand.85 - score = 41.12; SMART S_TKc (SM00220) at aa 54-310, E()=2.37e-107; 4 EFh (SM00054) domains, at aa 362-390, E()=8.50e-05; 409-437, E()=1.18e-03; 445-473, E()=3.30e-02; 478-506, E()=5.16e-04 TA16465 Tap821d03.p1c.cand.8 - score = 60.61 TA16410 Tap821d03.p1c.cand.7 - score = 17.51 TA16405 SMART pfam:Ribosomal_S26e (PF01283) at aa 1-114, E()=4.40e-48 TA16350 Tap821d03.p1c.C.cand.86 - score = 30.85; SMART AAA (SM00382) at aa 39-175, E()=1.96e-10 TA16245 SMART 1 transmembrane domain at aa 233-255; 1 probable transmembrane helix predicted for TA16245 by TMHMM2.0 at aa 233-255 TA16240 SMART pfam:RNA_pol (PF00940) at aa 810-1222, E()=2.70e-124 TA16130 Tap821d03.p1c.C.cand.88 - score = 47.10; SMART RING (SM0184) at aa 685-729 TA16125 Tap821d03.p1c.C.cand.89 - score = 20.47; SMART 1 transmembrane domain at aa 309-328; 1 probable transmembrane helix predicted for TA16125 by TMHMM2.0 at aa 309-328; Signal peptide predicted for TA16125 by SignalP 2.0 HMM (Signal peptide probability 0.688, signal anchor probability 0.010) with cleavage site probability 0.371 between residues 23 and 24 TA16120 Tap821d03.p1c.cand.5 - score = 32.12 TA16115 SMART pfam:Peptidase_S26 (PF00461) at aa 1-136, E()=1.60e-03 TA16110 SMART 1 transmembrane domain at aa 20-39; pfam:DUF174 (PF02617) at aa 59-144, E()=6.00e-05; 1 probable transmembrane helix predicted for TA16110 by TMHMM2.0 at aa 20-39 TA16105 Tap821d03.p1c.C.cand.90 - score = 26.38 TA16100 SMART ENDO3c (SM00478) at aa 122-295, E()=2.55e-11; GPI-Anchor Signal predicted for TA16100 by DGPI v2.04 with cleavage site probability 0.5814 near 282 TA16095 Tap821d03.p1c.cand.3 - score = 50.64; SMART pfam:Collagen (PF01391) at aa 345-403, E()=6.20e-02; 1 probable transmembrane helix predicted for TA16095 by TMHMM2.0 at aa 7-26 TA06655 Tap349e08.q2ks7.cand.137 - score = 49.29 TA06645 Tap349e08.q2ks7.cand.136 - score = 15.85 TA06640 Tap349e08.q2ks7.cand.135 - score = 33.79 TA06630 Tap349e08.q2ks7.cand.135 - score = 33.79; 3 probable transmembrane helices predicted for TA06630 by TMHMM2.0 at aa 113-135, 148-170 and 180-202 TA06625 Tap349e08.q2ks7.C.cand.1 - score = 60.72 TA06620 Tap349e08.q2ks7.C.cand.2 - score = 31.23; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA06620 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA06620 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.001) with cleavage site probability 0.936 between residues 16 and 17 TA06615 Tap349e08.q2ks7.C.cand.3 - score = 79.68 TA06610 Tap349e08.q2ks7.C.cand.4 - score = 117.01 TA06605 Tap349e08.q2ks7.C.cand.4 - score = 117.01 TA06600 Tap349e08.q2ks7.cand.134 - score = 34.31; 2 probable transmembrane helices predicted for TA06600 by TMHMM2.0 at aa 92-114 and 124-143 TA06595 Tap349e08.q2ks7.cand.133 - score = 26.45; Signal peptide predicted for TA06595 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.000) with cleavage site probability 0.841 between residues 16 and 17 TA06585 Tap349e08.q2ks7.cand.132 - score = 80.77 TA06575 4 probable transmembrane helices predicted for TA06575 by TMHMM2.0 at aa 20-37, 61-83, 90-107 and 117-139 TA06570 Tap349e08.q2ks7.cand.131 - score = 30.33 TA06565 Tap349e08.q2ks7.cand.130 - score = 11.30 TA06560 Tap349e08.q2ks7.C.cand.6 - score = 14.52; Signal peptide predicted for TA06560 by SignalP 2.0 HMM (Signal peptide probability 0.716, signal anchor probability 0.000) with cleavage site probability 0.404 between residues 18 and 19 TA06555 Tap349e08.q2ks7.cand.129 - score = 41.34 TA06550 Tap349e08.q2ks7.cand.129 - score = 41.34 TA06545 Tap349e08.q2ks7.C.cand.7 - score = 62.20 TA06540 Tap349e08.q2ks7.C.cand.8 - score = 32.47 TA06535 Tap349e08.q2ks7.C.cand.9 - score = 8.39 TA06530 Tap349e08.q2ks7.C.cand.10 - score = 20.45 TA06525 Tap349e08.q2ks7.C.cand.11 - score = 32.51 TA06520 Tap349e08.q2ks7.cand.128 - score = 61.23 TA06515 Tap349e08.q2ks7.cand.127 - score = 30.60 TA06510 Tap349e08.q2ks7.cand.127 - score = 30.60; 1 probable transmembrane helix predicted for TA06510 by TMHMM2.0 at aa 288-310; Signal peptide predicted for TA06510 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 19 and 20; GPI-Anchor Signal predicted for TA06510 by DGPI v2.04 with cleavage site probability 0.348 near 286 TA06500 Tap349e08.q2ks7.C.cand.12 - score = 91.68 TA06480 Tap349e08.q2ks7.cand.122 - score = 39.27 TA06470 Tap349e08.q2ks7.C.cand.13 - score = 106.32; Signal peptide predicted for TA06470 by SignalP 2.0 HMM (Signal peptide probability 0.926, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 20 and 21 TA06465 Tap349e08.q2ks7.C.cand.14 - score = 77.44 TA06460 Tap349e08.q2ks7.cand.121 - score = 63.47 TA06455 Tap349e08.q2ks7.cand.120 - score = 57.45 TA06450 Tap349e08.q2ks7.C.cand.15 - score = 14.18 TA06445 Tap349e08.q2ks7.cand.119 - score = 13.51 TA06440 Tap349e08.q2ks7.C.cand.16 - score = 14.80 TA06435 Tap349e08.q2ks7.C.cand.17 - score = 18.43 TA06430 1 probable transmembrane helix predicted for TA06430 by TMHMM2.0 at aa 574-592 TA06425 Tap349e08.q2ks7.C.cand.18 - score = 11.09 TA06415 Tap349e08.q2ks7.cand.117 - score = 38.99 TA06410 Tap349e08.q2ks7.cand.116 - score = 129.56; 11 probable transmembrane helices predicted for TA06410 by TMHMM2.0 at aa 143-165, 205-227, 242-259, 655-674, 684-706, 1171-1193, 1208-1227, 1234-1256, 1266-1285, 1292-1311 and 1365-1387 TA06405 Tap349e08.q2ks7.cand.116 - score = 129.56 TA06400 Tap349e08.q2ks7.C.cand.19 - score = 49.38 TA06395 Tap349e08.q2ks7.C.cand.20 - score = 81.34 TA06390 Tap349e08.q2ks7.cand.115 - score = 32.19 TA06385 Tap349e08.q2ks7.cand.115 - score = 32.19 TA06380 Tap349e08.q2ks7.cand.114 - score = 24.35; Signal peptide predicted for TA06380 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.433 between residues 23 and 24 TA06375 Tap349e08.q2ks7.cand.113 - score = 63.43; 1 probable transmembrane helix predicted for TA06375 by TMHMM2.0 at aa 4-26; Signal peptide predicted for TA06375 by SignalP 2.0 HMM (Signal peptide probability 0.972, signal anchor probability 0.019) with cleavage site probability 0.830 between residues 22 and 23; GPI-Anchor Signal predicted for TA06375 by DGPI v2.04, no cleavage site predicted TA06370 Tap349e08.q2ks7.cand.113 - score = 63.43; 10 probable transmembrane helices predicted for TA06370 by TMHMM2.0 at aa 13-35, 576-598, 605-627, 642-659, 668-690, 710-732, 745-767, 815-837, 858-880 and 890-912 TA06360 Tap349e08.q2ks7.cand.112 - score = 22.78; 11 probable transmembrane helices predicted for TA06360 by TMHMM2.0 at aa 20-39, 112-134, 144-166, 171-193, 208-230, 344-366, 376-393, 420-442, 462-484, 491-513 and 528-550; Signal anchor predicted for TA06360 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42 TA06355 Tap349e08.q2ks7.cand.112 - score = 22.78; Signal peptide predicted for TA06355 by SignalP 2.0 HMM (Signal peptide probability 0.979, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 20 and 21 TA06350 Tap349e08.q2ks7.cand.111 - score = 76.94 TA06345 Tap349e08.q2ks7.cand.111 - score = 76.94 TA06335 Tap349e08.q2ks7.C.cand.22 - score = 20.78 TA06330 Tap349e08.q2ks7.C.cand.23 - score = 62.22; 10 probable transmembrane helices predicted for TA06330 by TMHMM2.0 at aa 20-42, 375-397, 404-426, 436-458, 471-493, 525-547, 560-578, 625-647, 667-689 and 693-715 TA06325 Tap349e08.q2ks7.C.cand.23 - score = 62.22 TA06320 Signal peptide predicted for TA06320 by SignalP 2.0 HMM (Signal peptide probability 0.891, signal anchor probability 0.002) with cleavage site probability 0.546 between residues 24 and 25 TA06315 Tap349e08.q2ks7.cand.110 - score = 43.55; 1 probable transmembrane helix predicted for TA06315 by TMHMM2.0 at aa 52-74 TA06300 Tap349e08.q2ks7.C.cand.27 - score = 33.49 TA06295 Tap349e08.q2ks7.C.cand.28 - score = 52.28 TA06290 Tap349e08.q2ks7.cand.107 - score = 100.86 TA06285 Tap349e08.q2ks7.C.cand.29 - score = 22.35 TA06280 Signal peptide predicted for TA06280 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.000) with cleavage site probability 0.784 between residues 20 and 21 TA06270 Tap349e08.q2ks7.C.cand.30 - score = 44.77 TA06265 Tap349e08.q2ks7.C.cand.31 - score = 66.00; 10 probable transmembrane helices predicted for TA06265 by TMHMM2.0 at aa 22-44, 144-166, 176-198, 205-227, 242-264, 392-414, 429-451, 501-523, 543-565 and 578-596 TA06260 Tap349e08.q2ks7.C.cand.31 - score = 66.00; 11 probable transmembrane helices predicted for TA06260 by TMHMM2.0 at aa 20-42, 54-76, 98-120, 127-149, 164-181, 190-212, 274-296, 309-326, 868-890, 911-933 and 938-960 TA06245 Tap349e08.q2ks7.cand.103 - score = 11.20 TA06240 1 probable transmembrane helix predicted for TA06240 by TMHMM2.0 at aa 47-66; Signal anchor predicted for TA06240 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.898) with cleavage site probability 0.000 between residues -1 and 0 TA06225 Tap349e08.q2ks7.cand.101 - score = 8.92 TA06220 Tap349e08.q2ks7.cand.100 - score = 9.64; 3 probable transmembrane helices predicted for TA06220 by TMHMM2.0 at aa 7-26, 31-53 and 116-138; Signal peptide predicted for TA06220 by SignalP 2.0 HMM (Signal peptide probability 0.655, signal anchor probability 0.233) with cleavage site probability 0.142 between residues 20 and 21 TA06210 Tap349e08.q2ks7.C.cand.33 - score = 11.22 TA06205 Tap349e08.q2ks7.cand.98 - score = 15.65 TA06200 Tap349e08.q2ks7.cand.97 - score = 56.90 TA06195 Tap349e08.q2ks7.cand.96 - score = 29.40; 1 probable transmembrane helix predicted for TA06195 by TMHMM2.0 at aa 38-60; GPI-Anchor Signal predicted for TA06195 by DGPI v2.04 with cleavage site probability 0.3306 near 140 TA06185 Tap349e08.q2ks7.cand.96 - score = 29.40 TA06180 Tap349e08.q2ks7.C.cand.35 - score = 35.23 TA06175 Tap349e08.q2ks7.cand.95 - score = 27.48 TA06170 Tap349e08.q2ks7.C.cand.36 - score = 24.30 TA06165 Tap349e08.q2ks7.C.cand.37 - score = 50.06 TA06160 Tap349e08.q2ks7.C.cand.37 - score = 50.06 TA06155 Tap349e08.q2ks7.C.cand.38 - score = 46.79 TA06150 Tap349e08.q2ks7.C.cand.38 - score = 46.79; GPI-Anchor Signal predicted for TA06150 by DGPI v2.04 with cleavage site probability 0.172 near 270 TA06135 Tap349e08.q2ks7.cand.94 - score = 77.27 TA06130 Tap349e08.q2ks7.cand.93 - score = 74.21 TA06125 Tap349e08.q2ks7.cand.93 - score = 74.21 TA06115 Signal peptide predicted for TA06115 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.004) with cleavage site probability 0.885 between residues 24 and 25 TA06110 Tap349e08.q2ks7.cand.91 - score = 13.53 TA06105 Tap349e08.q2ks7.cand.90 - score = 153.22 TA06100 Tap349e08.q2ks7.C.cand.40 - score = 73.91 TA06095 Tap349e08.q2ks7.C.cand.40 - score = 73.91; 11 probable transmembrane helices predicted for TA06095 by TMHMM2.0 at aa 12-34, 519-541, 548-570, 575-597, 610-632, 668-690, 703-725, 749-771, 792-814, 824-846 and 867-889 TA06090 Tap349e08.q2ks7.C.cand.41 - score = 22.08; 9 probable transmembrane helices predicted for TA06090 by TMHMM2.0 at aa 15-32, 101-123, 133-155, 195-217, 237-259, 272-290, 341-363, 384-406 and 416-438 TA06080 Tap349e08.q2ks7.cand.89 - score = 34.64 TA06075 Signal peptide predicted for TA06075 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.607 between residues 20 and 21 TA06070 Tap349e08.q2ks7.C.cand.43 - score = 25.57; 12 probable transmembrane helices predicted for TA06070 by TMHMM2.0 at aa 20-42, 71-93, 113-135, 147-169, 174-196, 209-231, 339-361, 374-393, 443-465, 484-506, 516-538 and 573-595; GPI-Anchor Signal predicted for TA06070 by DGPI v2.04, no cleavage site predicted TA06065 Tap349e08.q2ks7.cand.88 - score = 37.95; Signal peptide predicted for TA06065 by SignalP 2.0 HMM (Signal peptide probability 0.745, signal anchor probability 0.012) with cleavage site probability 0.582 between residues 24 and 25 TA06060 Tap349e08.q2ks7.cand.87 - score = 26.10 TA06055 Tap349e08.q2ks7.cand.86 - score = 22.39 TA06050 Tap349e08.q2ks7.cand.86 - score = 22.39; 1 probable transmembrane helix predicted for TA06050 by TMHMM2.0 at aa 26-48; Signal anchor predicted for TA06050 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.856) with cleavage site probability 0.001 between residues 40 and 41 TA06045 Tap349e08.q2ks7.C.cand.44 - score = 20.15; transcription factor, putative TA06035 Tap349e08.q2ks7.C.cand.46 - score = 23.89 TA06030 2 probable transmembrane helices predicted for TA06030 by TMHMM2.0 at aa 7-29 and 33-52; Signal peptide predicted for TA06030 by SignalP 2.0 HMM (Signal peptide probability 0.667, signal anchor probability 0.278) with cleavage site probability 0.334 between residues 24 and 25 TA06025 Tap349e08.q2ks7.C.cand.48 - score = 35.22; 9 probable transmembrane helices predicted for TA06025 by TMHMM2.0 at aa 377-399, 411-433, 437-459, 480-502, 536-558, 565-582, 618-640, 660-682 and 692-714 TA06020 2 probable transmembrane helices predicted for TA06020 by TMHMM2.0 at aa 109-131 and 169-191 TA06015 Tap349e08.q2ks7.C.cand.49 - score = 30.68 TA06005 Tap349e08.q2ks7.C.cand.52 - score = 26.67; 10 probable transmembrane helices predicted for TA06005 by TMHMM2.0 at aa 236-258, 270-292, 296-318, 339-361, 388-410, 423-445, 465-487, 507-529, 539-561 and 592-614 TA06000 Tap349e08.q2ks7.cand.84 - score = 25.81 TA05995 Tap349e08.q2ks7.C.cand.53 - score = 25.19 TA05990 Tap349e08.q2ks7.cand.83 - score = 15.82 TA05985 Tap349e08.q2ks7.cand.82 - score = 36.75; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05985 by SignalP 2.0 HMM (Signal peptide probability 0.918, signal anchor probability 0.000) with cleavage site probability 0.588 between residues 21 and 22 TA05975 Tap349e08.q2ks7.C.cand.54 - score = 67.16 TA05970 Tap349e08.q2ks7.cand.81 - score = 58.72; 10 probable transmembrane helices predicted for TA05970 by TMHMM2.0 at aa 20-42, 587-609, 616-638, 643-665, 678-700, 720-742, 755-774, 820-842, 863-885 and 895-917 TA05965 Tap349e08.q2ks7.cand.80 - score = 27.22; 11 probable transmembrane helices predicted for TA05965 by TMHMM2.0 at aa 19-41, 222-244, 251-273, 283-305, 317-339, 373-395, 408-430, 462-484, 504-526, 536-558 and 579-601; Signal anchor predicted for TA05965 by SignalP 2.0 HMM (Signal peptide probability 0.161, signal anchor probability 0.704) with cleavage site probability 0.058 between residues 31 and 32 TA05960 Tap349e08.q2ks7.cand.79 - score = 24.56; 10 probable transmembrane helices predicted for TA05960 by TMHMM2.0 at aa 20-42, 115-137, 152-171, 178-200, 220-242, 349-371, 381-398, 464-486, 506-528 and 535-557 TA05955 Tap349e08.q2ks7.cand.78 - score = 24.24; 1 probable transmembrane helix predicted for TA05955 by TMHMM2.0 at aa 199-221 TA05950 Tap349e08.q2ks7.cand.77 - score = 45.27 TA05945 Tap349e08.q2ks7.cand.76 - score = 29.99 TA05940 Tap349e08.q2ks7.cand.76 - score = 29.99 TA05935 Tap349e08.q2ks7.C.cand.55 - score = 43.26 TA05930 Tap349e08.q2ks7.C.cand.56 - score = 85.88; 2 probable transmembrane helices predicted for TA05930 by TMHMM2.0 at aa 599-621 and 634-656 TA05920 Tap349e08.q2ks7.C.cand.57 - score = 53.10 TA05915 Tap349e08.q2ks7.C.cand.57 - score = 53.10 TA05905 Tap349e08.q2ks7.cand.75 - score = 145.41 TA05900 Tap349e08.q2ks7.C.cand.58 - score = 152.53 TA05895 Tap349e08.q2ks7.cand.74 - score = 9.81 TA05890 Tap349e08.q2ks7.C.cand.59 - score = 71.63 TA05885 Tap349e08.q2ks7.cand.73 - score = 23.86 TA05880 Tap349e08.q2ks7.cand.71 - score = 25.48 TA05875 Tap349e08.q2ks7.cand.70 - score = 42.45 TA05865 Tap349e08.q2ks7.C.cand.60 - score = 49.20 TA05860 Tap349e08.q2ks7.cand.68 - score = 143.15; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05860 by SignalP 2.0 HMM (Signal peptide probability 0.923, signal anchor probability 0.069) with cleavage site probability 0.589 between residues 20 and 21 TA05855 Tap349e08.q2ks7.cand.68 - score = 143.15; 1 probable transmembrane helix predicted for TA05855 by TMHMM2.0 at aa 210-232 TA05850 Tap349e08.q2ks7.cand.68 - score = 143.15 TA05845 Tap349e08.q2ks7.C.cand.61 - score = 59.45 TA05835 Tap349e08.q2ks7.cand.66 - score = 100.80 TA05830 Tap349e08.q2ks7.C.cand.62 - score = 16.00 TA05825 Tap349e08.q2ks7.cand.65 - score = 53.35; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05825 by SignalP 2.0 HMM (Signal peptide probability 0.802, signal anchor probability 0.002) with cleavage site probability 0.480 between residues 26 and 27 TA05820 Tap349e08.q2ks7.cand.64 - score = 15.14; 9 probable transmembrane helices predicted for TA05820 by TMHMM2.0 at aa 13-35, 45-67, 100-122, 132-151, 206-223, 228-247, 289-311, 361-383 and 390-409; Signal anchor predicted for TA05820 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.976) with cleavage site probability 0.008 between residues 23 and 24 TA05810 Tap349e08.q2ks7.cand.63 - score = 18.47 TA05805 Tap349e08.q2ks7.C.cand.64 - score = 72.48 TA05800 Tap349e08.q2ks7.C.cand.65 - score = 43.61 TA05795 Tap349e08.q2ks7.C.cand.66 - score = 42.92 TA05790 Tap349e08.q2ks7.C.cand.67 - score = 38.92 TA05785 Tap349e08.q2ks7.C.cand.68 - score = 154.07 TA05780 Tap349e08.q2ks7.cand.62 - score = 41.69; 9 probable transmembrane helices predicted for TA05780 by TMHMM2.0 at aa 375-397, 404-426, 441-458, 467-489, 509-531, 544-566, 595-617, 638-660 and 670-692 TA05775 Tap349e08.q2ks7.cand.61 - score = 24.15; 11 probable transmembrane helices predicted for TA05775 by TMHMM2.0 at aa 20-42, 153-175, 185-207, 214-236, 251-273, 411-433, 448-467, 523-545, 565-587, 594-613 and 633-652; Signal anchor predicted for TA05775 by SignalP 2.0 HMM (Signal peptide probability 0.040, signal anchor probability 0.680) with cleavage site probability 0.015 between residues 32 and 33 TA05770 Tap349e08.q2ks7.cand.60 - score = 31.38; 9 probable transmembrane helices predicted for TA05770 by TMHMM2.0 at aa 10-28, 83-105, 115-137, 144-166, 181-203, 278-300, 595-617, 638-660 and 665-687 TA05765 Tap349e08.q2ks7.cand.59 - score = 71.88 TA05755 Tap349e08.q2ks7.cand.58 - score = 27.15; 11 probable transmembrane helices predicted for TA05755 by TMHMM2.0 at aa 9-28, 43-65, 72-91, 96-118, 125-147, 162-181, 249-271, 281-300, 307-329, 339-361 and 768-790 TA05750 Tap349e08.q2ks7.C.cand.69 - score = 10.97; Signal peptide predicted for TA05750 by SignalP 2.0 HMM (Signal peptide probability 0.605, signal anchor probability 0.000) with cleavage site probability 0.591 between residues 21 and 22 TA05745 Tap349e08.q2ks7.cand.57 - score = 94.86 TA05740 Tap349e08.q2ks7.cand.56 - score = 20.82 TA05735 Tap349e08.q2ks7.cand.55 - score = 36.33; Signal peptide predicted for TA05735 by SignalP 2.0 HMM (Signal peptide probability 0.799, signal anchor probability 0.000) with cleavage site probability 0.444 between residues 20 and 21 TA05730 Tap349e08.q2ks7.C.cand.70 - score = 74.90 TA05725 Tap349e08.q2ks7.C.cand.70 - score = 74.90 TA05720 Tap349e08.q2ks7.cand.54 - score = 17.27 TA05715 Tap349e08.q2ks7.cand.54 - score = 17.27; 6 probable transmembrane helices predicted for TA05715 by TMHMM2.0 at aa 21-43, 63-85, 128-150, 160-182, 189-206 and 250-272 TA05710 Tap349e08.q2ks7.cand.53 - score = 119.95 TA05700 3 probable transmembrane helices predicted for TA05700 by TMHMM2.0 at aa 368-390, 545-567 and 572-591 TA05690 Tap349e08.q2ks7.cand.51 - score = 37.99; 4 probable transmembrane helices predicted for TA05690 by TMHMM2.0 at aa 26-48, 61-83, 98-116 and 168-190 TA05685 Tap349e08.q2ks7.cand.50 - score = 27.17 TA05680 Tap349e08.q2ks7.C.cand.74 - score = 35.57 TA05675 Tap349e08.q2ks7.cand.49 - score = 24.27 TA05670 Tap349e08.q2ks7.C.cand.75 - score = 13.36 TA05665 Tap349e08.q2ks7.C.cand.76 - score = 31.76 TA05660 Tap349e08.q2ks7.cand.48 - score = 23.90; 4 probable transmembrane helices predicted for TA05660 by TMHMM2.0 at aa 310-332, 337-359, 366-388 and 398-420 TA05655 Tap349e08.q2ks7.cand.47 - score = 34.95 TA07020 Tap349e08.q2ks7.C.cand.77 - score = 26.51 TA07015 Tap349e08.q2ks7.cand.46 - score = 44.19 TA07010 Tap349e08.q2ks7.cand.45 - score = 10.20 TA07005 Tap349e08.q2ks7.C.cand.78 - score = 27.30 TA07000 Tap349e08.q2ks7.C.cand.79 - score = 36.66 TA06995 Tap349e08.q2ks7.cand.44 - score = 73.06 TA06990 Tap349e08.q2ks7.C.cand.80 - score = 119.92 TA06985 Tap349e08.q2ks7.C.cand.80 - score = 119.92 TA06980 Tap349e08.q2ks7.cand.43 - score = 18.61; 10 probable transmembrane helices predicted for TA06980 by TMHMM2.0 at aa 26-48, 113-135, 147-169, 184-201, 213-235, 255-277, 289-311, 355-377, 398-420 and 424-446 TA06975 Tap349e08.q2ks7.cand.42 - score = 54.93; 10 probable transmembrane helices predicted for TA06975 by TMHMM2.0 at aa 21-43, 376-398, 405-427, 437-459, 471-493, 534-556, 563-585, 625-647, 667-689 and 693-715 TA06970 Tap349e08.q2ks7.cand.42 - score = 54.93; 11 probable transmembrane helices predicted for TA06970 by TMHMM2.0 at aa 20-42, 68-90, 110-132, 144-166, 170-192, 213-235, 268-290, 297-316, 354-376, 397-419 and 429-451 TA06965 Tap349e08.q2ks7.cand.41 - score = 47.16 TA06955 Tap349e08.q2ks7.cand.40 - score = 22.63; 9 probable transmembrane helices predicted for TA06955 by TMHMM2.0 at aa 19-41, 138-160, 170-192, 232-254, 292-314, 334-356, 417-439, 459-481 and 491-513 TA06950 Tap349e08.q2ks7.cand.39 - score = 21.45 TA06945 Tap349e08.q2ks7.cand.38 - score = 9.65; 2 probable transmembrane helices predicted for TA06945 by TMHMM2.0 at aa 15-37 and 58-77; Signal anchor predicted for TA06945 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.925) with cleavage site probability 0.004 between residues 33 and 34 TA06940 Tap349e08.q2ks7.C.cand.82 - score = 41.60; GPI-Anchor Signal predicted for TA06940 by DGPI v2.04 with cleavage site probability 0.10399999 near 736 TA06935 Tap349e08.q2ks7.cand.37 - score = 12.70 TA06930 Tap349e08.q2ks7.cand.36 - score = 11.49 TA06925 Tap349e08.q2ks7.cand.35 - score = 34.68 TA06920 Tap349e08.q2ks7.C.cand.83 - score = 33.70 TA06915 Tap349e08.q2ks7.C.cand.84 - score = 30.29 TA06910 Tap349e08.q2ks7.cand.34 - score = 9.50 TA06905 Tap349e08.q2ks7.C.cand.85 - score = 51.51 TA06900 Tap349e08.q2ks7.C.cand.86 - score = 38.10; 11 probable transmembrane helices predicted for TA06900 by TMHMM2.0 at aa 29-51, 119-141, 151-173, 180-202, 217-239, 510-532, 547-564, 617-639, 659-681, 688-710 and 725-747 TA06895 Tap349e08.q2ks7.C.cand.87 - score = 17.31; 10 probable transmembrane helices predicted for TA06895 by TMHMM2.0 at aa 24-46, 128-150, 163-185, 189-211, 232-254, 278-300, 313-335, 360-382, 402-421 and 431-453 TA06890 Tap349e08.q2ks7.cand.33 - score = 23.32; 6 probable transmembrane helices predicted for TA06890 by TMHMM2.0 at aa 80-102, 112-134, 154-176, 196-218, 231-250 and 254-276 TA06885 Tap349e08.q2ks7.C.cand.88 - score = 38.12 TA06880 Tap349e08.q2ks7.cand.32 - score = 18.33; 10 probable transmembrane helices predicted for TA06880 by TMHMM2.0 at aa 13-35, 50-72, 84-106, 116-138, 181-203, 223-245, 258-280, 304-326, 345-367 and 377-399 TA06875 Tap349e08.q2ks7.cand.31 - score = 77.81; 9 probable transmembrane helices predicted for TA06875 by TMHMM2.0 at aa 387-409, 413-435, 512-534, 549-571, 813-830, 845-867, 888-910, 925-944 and 1066-1088; Signal peptide predicted for TA06875 by SignalP 2.0 HMM (Signal peptide probability 0.892, signal anchor probability 0.103) with cleavage site probability 0.851 between residues 30 and 31 TA06870 Tap349e08.q2ks7.C.cand.89 - score = 58.81 TA06865 Tap349e08.q2ks7.C.cand.90 - score = 20.89 TA06860 Tap349e08.q2ks7.cand.30 - score = 71.90 TA06855 Tap349e08.q2ks7.C.cand.91 - score = 56.48 TA06850 Tap349e08.q2ks7.C.cand.92 - score = 15.60 TA06845 Tap349e08.q2ks7.cand.29 - score = 75.16 TA06840 Tap349e08.q2ks7.C.cand.93 - score = 73.97 TA06835 Tap349e08.q2ks7.C.cand.94 - score = 35.66 TA06830 Tap349e08.q2ks7.cand.28 - score = 20.09 TA06825 Tap349e08.q2ks7.cand.27 - score = 49.72 TA06815 Tap349e08.q2ks7.C.cand.97 - score = 21.22 TA06810 Tap349e08.q2ks7.cand.26 - score = 26.03; Signal peptide predicted for TA06810 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.055) with cleavage site probability 0.860 between residues 21 and 22 TA06805 Tap349e08.q2ks7.C.cand.98 - score = 19.12 TA06800 Tap349e08.q2ks7.cand.25 - score = 6.99 TA06795 Tap349e08.q2ks7.cand.24 - score = 65.93 TA06790 Tap349e08.q2ks7.C.cand.99 - score = 82.63 TA06785 Tap349e08.q2ks7.C.cand.100 - score = 76.63 TA06780 Tap349e08.q2ks7.C.cand.100 - score = 76.63 TA06775 Tap349e08.q2ks7.cand.23 - score = 71.78; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA06775 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.002) with cleavage site probability 0.848 between residues 19 and 20 TA06770 Tap349e08.q2ks7.cand.22 - score = 22.20 TA06765 Tap349e08.q2ks7.C.cand.101 - score = 24.57 TA06760 Tap349e08.q2ks7.cand.21 - score = 16.44 TA06755 Tap349e08.q2ks7.cand.20 - score = 36.25 TA06750 Tap349e08.q2ks7.C.cand.102 - score = 113.52 TA06745 Tap349e08.q2ks7.cand.19 - score = 33.28; 9 probable transmembrane helices predicted for TA06745 by TMHMM2.0 at aa 29-51, 72-94, 99-121, 126-148, 163-185, 253-275, 539-561, 582-604 and 609-631 TA06740 Tap349e08.q2ks7.cand.18 - score = 37.58; 11 probable transmembrane helices predicted for TA06740 by TMHMM2.0 at aa 5-27, 47-69, 89-111, 123-145, 150-172, 185-207, 313-335, 348-366, 403-425, 446-468 and 478-500; Signal peptide predicted for TA06740 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.004) with cleavage site probability 0.525 between residues 20 and 21 TA06735 Tap349e08.q2ks7.cand.18 - score = 37.58 TA06730 Tap349e08.q2ks7.cand.17 - score = 26.30 TA06725 Tap349e08.q2ks7.cand.16 - score = 39.04; 1 probable transmembrane helix predicted for TA06725 by TMHMM2.0 at aa 7-29 TA06720 Tap349e08.q2ks7.C.cand.103 - score = 43.43 TA06715 Tap349e08.q2ks7.C.cand.104 - score = 80.26; 1 probable transmembrane helix predicted for TA06715 by TMHMM2.0 at aa 184-206 TA06710 Tap349e08.q2ks7.C.cand.104 - score = 80.26 TA06705 Tap349e08.q2ks7.cand.15 - score = 7.72 TA06700 Tap349e08.q2ks7.C.cand.105 - score = 170.39 TA06695 Tap349e08.q2ks7.C.cand.106 - score = 68.39 TA06690 Tap349e08.q2ks7.C.cand.107 - score = 12.40 TA06685 Tap349e08.q2ks7.cand.14 - score = 102.53; 7 probable transmembrane helices predicted for TA06685 by TMHMM2.0 at aa 199-221, 228-245, 390-412, 425-447, 1100-1122, 1287-1309 and 1319-1341 TA06680 Tap349e08.q2ks7.C.cand.109 - score = 26.48; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA06680 by SignalP 2.0 HMM (Signal peptide probability 0.682, signal anchor probability 0.023) with cleavage site probability 0.551 between residues 20 and 21 TA06675 Tap349e08.q2ks7.cand.13 - score = 15.80; 1 probable transmembrane helix predicted for TA06675 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA06675 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.005) with cleavage site probability 0.751 between residues 21 and 22 TA06670 Tap349e08.q2ks7.C.cand.110 - score = 34.06 TA06665 Tap349e08.q2ks7.C.cand.111 - score = 15.90 TA06635 Tap349e08.q2ks7.C.cand.112 - score = 41.43; 9 probable transmembrane helices predicted for TA06635 by TMHMM2.0 at aa 20-39, 127-149, 159-181, 223-245, 656-678, 685-702, 735-757, 777-799 and 803-825 TA06580 Tap349e08.q2ks7.C.cand.113 - score = 16.46; 9 probable transmembrane helices predicted for TA06580 by TMHMM2.0 at aa 20-42, 108-130, 140-162, 202-224, 256-278, 291-309, 337-359, 380-402 and 407-426 TA06475 Tap349e08.q2ks7.cand.12 - score = 61.65; 4 probable transmembrane helices predicted for TA06475 by TMHMM2.0 at aa 35-57, 129-151, 178-200 and 227-249; GPI-Anchor Signal predicted for TA06475 by DGPI v2.04 with cleavage site probability 0.3306 near 305 TA06420 2 probable transmembrane helices predicted for TA06420 by TMHMM2.0 at aa 10-32 and 53-75; Signal peptide predicted for TA06420 by SignalP 2.0 HMM (Signal peptide probability 0.732, signal anchor probability 0.124) with cleavage site probability 0.204 between residues 28 and 29 TA06310 Tap349e08.q2ks7.cand.11 - score = 25.91 TA06255 Tap349e08.q2ks7.cand.10 - score = 43.57 TA06250 Tap349e08.q2ks7.C.cand.114 - score = 51.84 TA06145 Tap349e08.q2ks7.cand.9 - score = 81.24 TA06140 Tap349e08.q2ks7.C.cand.117 - score = 44.50 TA06085 Tap349e08.q2ks7.C.cand.118 - score = 38.73 TA05980 Tap349e08.q2ks7.cand.8 - score = 33.14 TA05925 Tap349e08.q2ks7.cand.7 - score = 38.76 TA05870 Tap349e08.q2ks7.cand.6 - score = 49.03; Signal peptide predicted for TA05870 by SignalP 2.0 HMM (Signal peptide probability 0.938, signal anchor probability 0.000) with cleavage site probability 0.522 between residues 22 and 23 TA05815 Tap349e08.q2ks7.cand.5 - score = 30.59; Signal peptide predicted for TA05815 by SignalP 2.0 HMM (Signal peptide probability 0.824, signal anchor probability 0.084) with cleavage site probability 0.391 between residues 26 and 27 TA05760 Tap349e08.q2ks7.cand.4 - score = 46.24; Signal peptide predicted for TA05760 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.001) with cleavage site probability 0.878 between residues 22 and 23 TA05705 Tap349e08.q2ks7.cand.3 - score = 53.66; Signal peptide predicted for TA05705 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 21 and 22 TA05650 Tap349e08.q2ks7.cand.2 - score = 20.29 TA05645 Tap349e08.q2ks7.C.cand.120 - score = 53.58 TA05640 2 probable transmembrane helices predicted for TA05640 by TMHMM2.0 at aa 62-84 and 94-108 TA05635 Tap349e08.q2ks7.C.cand.122 - score = 7.18; 2 probable transmembrane helices predicted for TA05635 by TMHMM2.0 at aa 114-136 and 140-162 TA05630 Tap349e08.q2ks7.C.cand.123 - score = 12.57 TA05615 Tap349e08.q2ks7.C.cand.127 - score = 14.65; Signal peptide predicted for TA05615 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.966 between residues 17 and 18 TA05610 Tap349e08.q2ks7.cand.1 - score = 30.40 TA02750 Tap152h01.q1c.C.cand.47 - score = 16.97; SMART pfam:asp (PF00026) at aa 135-471, E()=4.90e-18 TA02755 SMART 2 transmembrane domains at aa 443-465 and 472-494; 2 probable transmembrane helices predicted for TA02755 by TMHMM2.0 at aa 443-465 and 472-494 TA02760 Tap152h01.q1c.C.cand.46 - score = 29.77 TA02765 could have another exon in between the exonVI & exon VII; SMART pfam:Adaptin_N (PF01602) at aa 1-471, E()=4.00e-02 TA02770 Tap152h01.q1c.C.cand.43 - score = 8.99; Signal peptide predicted for TA02770 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.007) with cleavage site probability 0.426 between residues 21 and 22 TA02775 SMART pfam:Ribosomal_L15 (PF01305) at aa 160-253, E()=1.10e-03 TA02785 Tap152h01.q1c.cand.2 - score = 25.87; Signal peptide predicted for TA02785 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.658 between residues 15 and 16 TA02790 SMART pfam:COX2 (PF00116) at aa 2-156, E()=5.60e-51 TA02795 SMART pfam:Ribosomal_L17 (PF01196) at aa 32-129, E()=1.90e-08 TA02800 SMART pfam:MMR_HSR1 (Pf01926) at aa 409-806, E()=4.90e-28 TA02805 Tap152h01.q1c.C.cand.40 - score = 21.32; SMART 1 transmembrane domain at aa 519-538; 1 probable transmembrane helix predicted for TA02805 by TMHMM2.0 at aa 519-538 TA02810 Tap152h01.q1c.cand.5 - score = 32.02; SMART S_TKc (SM0220) at aa 15-315, E()=8.77e-102 TA02815 Tap152h01.q1c.cand.6 - score = 32.61; SMART pfam:GAR_B (PF02842) at aa 46-124, E()=1.30e-02; pfam:ATP-grasp (PF02222) at aa 64-244, E()=6.40e-23; pfam:ligase_CoA (PF00549) at aa 291-433, E()=1.60e-44 TA02820 Tap152h01.q1c.C.cand.39 - score = 18.43 TA02825 Tap152h01.q1c.cand.7 - score = 14.46; SMART pfam:KOW (PF00467) at aa 8-40, E()=6.40e-02; pfam:Ribosomal_L14e (PF01929) at aa 48-124, E()=1.10e-20 TA02840 Tap152h01.q1c.cand.8 - score = 20.57 TA02845 Tap152h01.q1c.cand.9 - score = 185.03; SMART 3 pfam:DUF529 (PF04385) domains at aa 709-858, E()=3.50e-23; 949-1095, E()=2.00e-09; 1242-1393, E()=6.40e-27 TA02850 SMART pfam:Nop10p (PF04135) at aa 3-53, E()=9.70e-25 TA02855 Tap152h01.q1c.cand.10 - score = 44.99; SMARt pfam:DUF602 (PF04641) at aa 1-213, E()=1.00e-11 TA02860 Tap152h01.q1c.cand.10 - score = 44.99 TA02865 Tap152h01.q1c.cand.11 - score = 17.86; SMART 9 transmembrane domains at aa 95-117, 124-146, 150-172, 185-207, 246-268, 280-297, 312-332, 353-375 and 385-407; 10 probable transmembrane helices predicted for TA02865 by TMHMM2.0 at aa 17-36, 95-117, 124-146, 150-172, 185-207, 246-268, 280-297, 312-332, 353-375 and 385-407 TA02870 Tap152h01.q1c.C.cand.36 - score = 26.00; SMART 1 transmembrane domain at aa 270-292; 1 probable transmembrane helix predicted for TA02870 by TMHMM2.0 at aa 270-292 TA02875 Tap152h01.q1c.C.cand.34 - score = 32.94 TA02880 Tap152h01.q1c.C.cand.33 - score = 75.80; SMART MCM (SM00350) at aa 379-886, E()=1.37e-20; AAA (SM00382) at aa 613-762, E()=2.53e-04 TA02885 Tap152h01.q1c.cand.12 - score = 24.55; SMART DnaJ (SM00271) at aa 7-66, E()=2.38e-29 TA02890 Tap152h01.q1c.C.cand.32 - score = 32.02; SMART HDc (SM00471) at aa 167-335, E()=6.10e-04 TA02895 SMART pfam:Ribosomal_S18 (PF01084) at aa 261-314, E()=1.80e-13 TA02900 SMART 2 transmembrane domains at aa 1178-1200 and 1207-1229; 2 probable transmembrane helices predicted for TA02900 by TMHMM2.0 at aa 1178-1200 and 1207-1229 TA02910 Tap152h01.q1c.C.cand.29 - score = 27.89; SMART pfam:Clat_adaptor_s (PF01217) at aa 1-135, E()=4.40e-02; pfam:Adap_comp_sub (PF00928) at aa 5-490, E()=3.70e-30 TA02915 Tap152h01.q1c.cand.14 - score = 27.49; SMART pfam:GDPD (PF03009) at aa 9-341, E()=1.40e-04 TA02920 Tap152h01.q1c.C.cand.28 - score = 95.44 TA02925 Tap152h01.q1c.C.cand.27 - score = 23.75; SMART pfam:adh_short (PF00106) at aa 3-331, E()=1.30e-09 TA02935 Tap152h01.q1c.C.cand.26 - score = 71.74; SMART 5 transmembrane domains at aa 45-67, 106-128, 149-171, 181-203 and 224-246; RING (SM00184) at aa 304-342, E()=2.17e-05; ZnF_NFX (SM00438) at aa 320-344, E()=0.00e+00; 6 probable transmembrane helices predicted for TA02935 by TMHMM2.0 at aa 10-32, 45-67, 106-128, 149-171, 181-203 and 224-246; Signal peptide predicted for TA02935 by SignalP 2.0 HMM (Signal peptide probability 0.665, signal anchor probability 0.064) with cleavage site probability 0.196 between residues 22 and 23 TA02940 Tap152h01.q1c.cand.15 - score = 41.42 TA02945 Tap152h01.q1c.cand.15 - score = 41.42; SMART 1 transmembrane domain at aa 572-589; 1 probable transmembrane helix predicted for TA02945 by TMHMM2.0 at aa 572-589 TA02955 Tap152h01.q1c.cand.16 - score = 74.60 TA02960 Theileria parva Tpr-like protein, distantly related, mixture; SMART 3 transmembrane domains at aa 36-58, 78-100 and 112-134; 1 probable transmembrane helix predicted for TA02960 by TMHMM2.0 at aa 28-50; Signal anchor predicted for TA02960 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.001 between residues 45 and 46 TA02965 Tap152h01.q1c.C.cand.25 - score = 83.65; SMART pfam:Ribosomal_S25 (PF03297) at aa 1-104, E()=1.10e-40 TA02970 Tap152h01.q1c.C.cand.25 - score = 83.65; SMART pfam:RNA_pol_Rpc34 (PF05150) at aa 7-297, E()=2.30e-08; 4 transmembrane domains at aa 298-317, 322-344, 408-430 and 437-459; 4 probable transmembrane helices predicted for TA02970 by TMHMM2.0 at aa 298-317, 322-344, 408-430 and 437-459 TA02975 SMART 1 transmembrane domain at aa 49-71; 1 probable transmembrane helix predicted for TA02975 by TMHMM2.0 at aa 49-71 TA02980 Tap152h01.q1c.C.cand.25 - score = 83.65; SMART pfam:AMA-1 (PF02430) at aa 204-739, E()=1.30e-16; 1 probable transmembrane helix predicted for TA02980 by TMHMM2.0 at aa 693-715 TA02985 Tap152h01.q1c.C.cand.24 - score = 25.81; SMART 2 transmembrane domains at aa 85-107 and 122-141; pfam:CDC50 (PF03381) at aa 228-444, E()=1.10e-03; 3 probable transmembrane helices predicted for TA02985 by TMHMM2.0 at aa 85-107, 122-141 and 412-434 TA02990 Tap152h01.q1c TA02995 Tap152h01.q1c.cand.19 - score = 88.65; SMART 3 pfam:DUF29 (PF04385) domains at aa 544-683, E()=5.80e-74; 969-1097, E()=3.00e-07; 1437-1600, E()=2.90e-16; pfam:EMA (PF02468) at aa 518-714, E()=2.20e-02 TA03000 Tap152h01.q1c.C.cand.22 - score = 54.35; SMART 5 transmembrane domains at aa 143-165, 178-200, 288-310, 317-339 and 444-466; ZnF_NFX (SM00438) at aa 242-264, E()=0.00e+00; 2 AAA (SM00382) domains at aa 548-747, E()=3.31e-01; 1264-1498, E()=8.15e-02; pfam:ABC_membrane (PF00664) at aa 847-1135, E()=5.90e-03; 10 probable transmembrane helices predicted for TA03000 by TMHMM2.0 at aa 143-165, 178-200, 288-310, 317-339, 444-466, 837-859, 900-922, 976-998, 1002-1021 and 1085-1107 TA03010 Tap152h01.q1c.C.cand.21 - score = 30.54; SMART ZnF_NFX (SM00438) at aa 95-112, E()=0.00e+00 TA03015 Tap152h01.q1c.C.cand.21 - score = 30.54; SMART pfam:DIM1 (PF02966) at aa 2-190, E()=6.70e-69; 1 probable transmembrane helix predicted for TA03015 by TMHMM2.0 at aa 163-185 TA03020 Tap152h01.q1c.cand.21 - score = 212.81; SMART DEXDc (SM00487) at aa 301-485, E()=1.50e-34; AAA (SM00382) at aa 318-457, E()=4.98e-03; HELICc (SM00490) at aa 526-633, E()=1.38e-15; pfam:HA2 (PF04408) at aa 692-787, E()=1.40e-30 TA03025 Tap152h01.q1c.cand.21 - score = 212.81; SMART 8 pfam:DUF529 (PF04385) domains at aa 85-223, E()=1.40e-65; 440-593, E()=2.90e-25; 862-1008, E()=6.90e-34; 1052-1190, E()=1.50e-62; 1257-1398, E()=5.10e-67; 1402-1600, E()=2.60e-75; 1696-1836, E()=6.10e-70; 1884-2019, E()=1.00e-57; ZnF_NFX (SM00438) at aa 797-823, E()=0.00e+00 TA03030 SMART RAB 38-209, E()=1.96e-72; 1 probable transmembrane helix predicted for TA03030 by TMHMM2.0 at aa 205-227 TA03035 Tap152h01.q1c.C.cand.20 - score = 22.75; SMART pfam:EFP (PF01132) at aa 19-152, E()=1.50e-05 TA03040 Tap152h01.q1c.C.cand.19 - score = 10.89; SMART RRM (SM00360) at aa 66-130, E()=3.74e-05 TA03045 Tap152h01.q1c.cand.22 - score = 12.82; SMART pfam:UPF0020 (PF01170) at aa 225-404, E()=4.40e-07 TA03050 SMART pfam:TP_methylase (PF00590) at aa 2-222, E()=9.50e-07 TA03055 SMART pfam:ADK (PF00406) at aa 32-218, E()=2.20e-74; pfam:ADK_lid (PF05191) at aa 154-189, E()=1.10e-19 TA03060 Tap152h01.q1c.cand.24 - score = 12.45 TA03065 Tap152h01.q1c.C.cand.17 - score = 14.54; SMART 2 ZnF_C2H2 (SM00355) domains at aa 13-36, E()=8.52e+00; 37-60, E()=8.34e-03 TA03070 Tap152h01.q1c.C.cand.16 - score = 28.96; SMART 3 transmembrane domains at aa 12-34, 49-71 and 201-223; 3 probable transmembrane helices predicted for TA03070 by TMHMM2.0 at aa 12-34, 49-71 and 201-223 TA03075 SMART 2 pfam:TBP (PF00352) at aa 41-126, E()=7.20e-32; 132-221, E()=2.10e-27 TA03080 Tap152h01.q1c.cand.26 - score = 72.72; SMART MIF4G (SM00543) at aa 648-952, E()=7.64e-16 TA03085 Tap152h01.q1c.C.cand.15 - score = 8.46 TA03090 Tap152h01.q1c.C.cand.14 - score = 11.59 TA03095 Tap152h01.q1c.cand.27 - score = 7.29 TA03100 Tap152h01.q1c.cand.28 - score = 17.81; SMART 2 WD40 (SM0320) domains at aa 242-282, E()=1.12e-02; 285-326, E()=3.07e+01 TA03105 Tap152h01.q1c.cand.28 - score = 17.81 TA03110 Tap152h01.q1c.C.cand.13 - score = 37.22; Signal peptide predicted for TA03110 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.928 between residues 23 and 24 TA03115 Tap152h01.q1c.C.cand.12 - score = 71.37; Signal peptide predicted for TA03115 by SignalP 2.0 HMM (Signal peptide probability 0.860, signal anchor probability 0.006) with cleavage site probability 0.615 between residues 26 and 27 TA03120 Tap152h01.q1c.C.cand.11 - score = 15.22; Signal peptide predicted for TA03120 by SignalP 2.0 HMM (Signal peptide probability 0.874, signal anchor probability 0.060) with cleavage site probability 0.793 between residues 23 and 24 TA03125 Tap152h01.q1c.C.cand.10 - score = 40.23 TA03130 Tap152h01.q1c.C.cand.9 - score = 36.44; SMART 1 transmembrane domain at aa 7-26; AT_hook (SM0384) at aa 158-170, E()=5.93e-01; 1 probable transmembrane helix predicted for TA03130 by TMHMM2.0 at aa 7-26 TA03135 Tap152h01.q1c.C.cand.8 - score = 46.46; SMART 2 AT_hook (SM00384) domains at aa 418-430, E()=1.40e+00; 436-448, E()=3.88e+00 TA03140 Tap152h01.q1c.C.cand.7 - score = 35.04; SMART 1 transmembrane domain at aa 7-26; 3 AT_hook (SM00384) domains at aa 139-151, E()=9.29e-01; 169-181, E()=1.82e-01; and 186-198, E()=1.42e-01; 1 probable transmembrane helix predicted for TA03140 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03140 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24 TA03145 Tap152h01.q1c.C.cand.6 - score = 29.20; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03145 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03145 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24 TA03150 Tap152h01.q1c.C.cand.5 - score = 28.77; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03150 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03150 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24 TA03155 Tap152h01.q1c.C.cand.4 - score = 26.95; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03155 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03155 by SignalP 2.0 HMM (Signal peptide probability 0.686, signal anchor probability 0.170) with cleavage site probability 0.623 between residues 23 and 24 TA03160 Tap152h01.q1c.C.cand.3 - score = 40.35; SMART 1 transmembrane domain at aa 9-28; 1 probable transmembrane helix predicted for TA03160 by TMHMM2.0 at aa 9-28; Signal peptide predicted for TA03160 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.154) with cleavage site probability 0.761 between residues 25 and 26 TA03165 Tap152h01.q1c.C.cand.2 - score = 31.89; SMART 1 transmembrane domain at aa 7-26; 1 probable transmembrane helix predicted for TA03165 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA03165 by SignalP 2.0 HMM (Signal peptide probability 0.907, signal anchor probability 0.005) with cleavage site probability 0.876 between residues 23 and 24 TA20082 Signal peptide predicted for TA20082 by SignalP 2.0 HMM (Signal peptide probability 0.774, signal anchor probability 0.000) with cleavage site probability 0.399 between residues 24 and 25 TA20083 Signal peptide predicted for TA20083 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.005) with cleavage site probability 0.837 between residues 23 and 24 TA20085 Signal peptide predicted for TA20085 by SignalP 2.0 HMM (Signal peptide probability 0.751, signal anchor probability 0.000) with cleavage site probability 0.387 between residues 23 and 24 TA20090 Signal peptide predicted for TA20090 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.005) with cleavage site probability 0.837 between residues 23 and 24 TA20150 10 probable transmembrane helices predicted for TA20150 by TMHMM2.0 at aa 20-42, 62-79, 92-114, 149-171, 184-206, 250-272, 284-301, 316-335, 356-378 and 388-410; Signal peptide predicted for TA20150 by SignalP 2.0 HMM (Signal peptide probability 0.668, signal anchor probability 0.264) with cleavage site probability 0.471 between residues 37 and 38 TA20155 Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA20155 by TMHMM2.0 at aa 4-22 TA20160 1 probable transmembrane helix predicted for TA20160 by TMHMM2.0 at aa 2-21 TA20165 Tap404f10.p1c.C.cand.127 - score = 28.53 TA20170 Tap404f10.p1c.C.cand.126 - score = 15.63 TA20180 Tap404f10.p1c.C.cand.125 - score = 37.06; 1 probable transmembrane helix predicted for TA20180 by TMHMM2.0 at aa 808-830 TA20185 4 probable transmembrane helices predicted for TA20185 by TMHMM2.0 at aa 172-194, 234-256, 340-362 and 395-417 TA20195 Alternative gene structure possible TA20215 Signal peptide predicted for TA20215 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.011) with cleavage site probability 0.760 between residues 26 and 27 TA20225 1 probable transmembrane helix predicted for TA20225 by TMHMM2.0 at aa 64-86 TA20240 Contains a putative signal sequence; Contains 7 putative transmembrane domains; alternative gene structure possible; 8 probable transmembrane helices predicted for TA20240 by TMHMM2.0 at aa 10-32, 91-113, 123-142, 149-168, 202-224, 412-434, 444-462 and 464-486 TA20260 Signal peptide predicted for TA20260 by SignalP 2.0 HMM (Signal peptide probability 0.671, signal anchor probability 0.000) with cleavage site probability 0.565 between residues 16 and 17 TA20310 Signal peptide predicted for TA20310 by SignalP 2.0 HMM (Signal peptide probability 0.956, signal anchor probability 0.000) with cleavage site probability 0.650 between residues 20 and 21 TA20315 Signal peptide predicted for TA20315 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.964 between residues 17 and 18 TA20320 5 probable transmembrane helices predicted for TA20320 by TMHMM2.0 at aa 355-377, 390-412, 427-446, 458-480 and 506-528 TA20325 6 probable transmembrane helices predicted for TA20325 by TMHMM2.0 at aa 10-29, 34-56, 69-88, 93-115, 120-142 and 359-381; Signal anchor predicted for TA20325 by SignalP 2.0 HMM (Signal peptide probability 0.194, signal anchor probability 0.794) with cleavage site probability 0.099 between residues 26 and 27 TA20330 1 probable transmembrane helix predicted for TA20330 by TMHMM2.0 at aa 513-535 TA20345 1 probable transmembrane helix predicted for TA20345 by TMHMM2.0 at aa 83-105 TA20350 4 probable transmembrane helices predicted for TA20350 by TMHMM2.0 at aa 302-324, 384-406, 416-435 and 442-459 TA20380 7 probable transmembrane helices predicted for TA20380 by TMHMM2.0 at aa 45-64, 71-93, 103-125, 132-154, 164-186, 193-215 and 228-250 TA20385 7 probable transmembrane helices predicted for TA20385 by TMHMM2.0 at aa 73-95, 105-126, 133-152, 162-179, 191-213, 218-240 and 253-275 TA20395 1 probable transmembrane helix predicted for TA20395 by TMHMM2.0 at aa 202-224 TA20420 very weak SMART hit (4.19e+00) to t-SNARE; 1 probable transmembrane helix predicted for TA20420 by TMHMM2.0 at aa 191-213 TA20430 1 probable transmembrane helix predicted for TA20430 by TMHMM2.0 at aa 31-50; Signal anchor predicted for TA20430 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.777) with cleavage site probability 0.015 between residues 48 and 49 TA20435 Signal peptide predicted for TA20435 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.002) with cleavage site probability 0.787 between residues 22 and 23 TA20440 Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA20440 by TMHMM2.0 at aa 4-26, 143-165 and 223-240; Signal peptide predicted for TA20440 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.001) with cleavage site probability 0.615 between residues 22 and 23 TA20455 Contains putative signal peptide TA20470 Significant similarity to 1-deoxy-D-xylulose 5-phosphate synthases of several prokaryotic origin TA20475 Shows significant Pfam hit (2.7e-08) to Peptidase_M3 family domain TA20480 Contains several Ankyrin repeat elements TA20490 4 probable transmembrane helices predicted for TA20490 by TMHMM2.0 at aa 30-49, 61-83, 98-120 and 141-163 TA20495 Shows weak similarity to PHD (2.56e-02), RING finger (7.87e-01) and SET (9.3e-02) SMART domains TA20505 1 probable transmembrane helix predicted for TA20505 by TMHMM2.0 at aa 520-542; Signal peptide predicted for TA20505 by SignalP 2.0 HMM (Signal peptide probability 0.675, signal anchor probability 0.000) with cleavage site probability 0.597 between residues 19 and 20 TA20520 2 probable transmembrane helices predicted for TA20520 by TMHMM2.0 at aa 4-23 and 183-205; Signal peptide predicted for TA20520 by SignalP 2.0 HMM (Signal peptide probability 0.988, signal anchor probability 0.000) with cleavage site probability 0.574 between residues 19 and 20 TA20535 Moderate Pfam hit (7.4e-05) to TPR domain TA20560 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20560 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.426 between residues 18 and 19 TA20575 Weak Pfam hit (8.7e-03) to endonuclease/exonuclease/phosphatase family; product call is based on the Pfam match TA20585 1 probable transmembrane helix predicted for TA20585 by TMHMM2.0 at aa 163-185 TA20600 Not conserved protein length-wise in the N-terminal end; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA20600 by TMHMM2.0 at aa 5-27 and 34-56; Signal anchor predicted for TA20600 by SignalP 2.0 HMM (Signal peptide probability 0.015, signal anchor probability 0.788) with cleavage site probability 0.004 between residues 25 and 26 TA20615 Contains putative signal peptide; 1 probable transmembrane helix predicted for TA20615 by TMHMM2.0 at aa 13-35; Signal peptide predicted for TA20615 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.216) with cleavage site probability 0.151 between residues 39 and 40; GPI-Anchor Signal predicted for TA20615 by DGPI v2.04, no cleavage site predicted TA20620 1 probable transmembrane helix predicted for TA20620 by TMHMM2.0 at aa 5113-5135 TA20630 20 probable transmembrane helices predicted for TA20630 by TMHMM2.0 at aa 107-129, 133-155, 162-184, 218-240, 293-315, 325-347, 381-398, 402-424, 444-466, 495-517, 524-546, 556-574, 581-603, 618-640, 652-674, 704-726, 728-750, 765-787, 800-822 and 946-968 TA20640 Signal peptide predicted for TA20640 by SignalP 2.0 HMM (Signal peptide probability 0.621, signal anchor probability 0.018) with cleavage site probability 0.310 between residues 18 and 19 TA20650 1 probable transmembrane helix predicted for TA20650 by TMHMM2.0 at aa 9-31 TA20675 Signal peptide predicted for TA20675 by SignalP 2.0 HMM (Signal peptide probability 0.874, signal anchor probability 0.001) with cleavage site probability 0.846 between residues 19 and 20 TA20680 3 probable transmembrane helices predicted for TA20680 by TMHMM2.0 at aa 394-416, 423-445 and 460-478 TA20685 1 probable transmembrane helix predicted for TA20685 by TMHMM2.0 at aa 51-73 TA20690 Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA20690 by TMHMM2.0 at aa 12-31 TA20710 Conserved C-terminus TA20745 small overlap at the 3' end with gene TA20750 TA20750 small overlap at the 3' end with gene TA20745 TA20765 1 probable transmembrane helix predicted for TA20765 by TMHMM2.0 at aa 13-30 TA20780 Conserved amino acids present but the matches are not throughout the length of the matching proteins TA20781 Signal peptide predicted for TA20781 by SignalP 2.0 HMM (Signal peptide probability 0.932, signal anchor probability 0.000) with cleavage site probability 0.797 between residues 21 and 22; GPI-Anchor Signal predicted for TA20781 by DGPI v2.04, no cleavage site predicted TA20782 8 probable transmembrane helices predicted for TA20782 by TMHMM2.0 at aa 580-597, 609-631, 701-723, 775-797, 822-844, 902-919, 953-975 and 1070-1087 TA20783 8 probable transmembrane helices predicted for TA20783 by TMHMM2.0 at aa 2038-2060, 2067-2089, 2137-2159, 2187-2209, 2243-2265, 2291-2310, 2320-2342 and 2354-2376 TA20790 Signal peptide predicted for TA20790 by SignalP 2.0 HMM (Signal peptide probability 0.660, signal anchor probability 0.000) with cleavage site probability 0.462 between residues 17 and 18 TA20815 Similarity to tata-box binding proteins of several bacteria & 2 malaria species TA20825 Weak hit to serine-threonine protein kinase domain TA20830 1 probable transmembrane helix predicted for TA20830 by TMHMM2.0 at aa 12-34 TA20840 Contains possible TPR repeat domains TA20855 Part similarity to Plasmodium yoelii (SWALL:EAA20932) and Plasmodium falciparum (SWALL:Q8IE86) hypothetical proteins; Contains a putative signal peptide; Signal peptide predicted for TA20855 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.688 between residues 22 and 23; GPI-Anchor Signal predicted for TA20855 by DGPI v2.04, no cleavage site predicted TA20870 Signal peptide predicted for TA20870 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.895 between residues 22 and 23 TA20885 Contains several (12) putative transmembrane domains; 12 probable transmembrane helices predicted for TA20885 by TMHMM2.0 at aa 164-182, 204-226, 231-250, 255-277, 290-312, 322-339, 418-440, 455-477, 484-506, 511-533, 571-590 and 600-622 TA20890 Shows weak hit (8.03e-03) to Pfam LON domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20890 by SignalP 2.0 HMM (Signal peptide probability 0.924, signal anchor probability 0.011) with cleavage site probability 0.549 between residues 25 and 26 TA20915 Contains a putative signal peptide TA20920 Significantly similar to a conserved protein annotated as 'developmental protein' in plants TA20925 Contains putative WD40 domains TA20930 Signal peptide predicted for TA20930 by SignalP 2.0 HMM (Signal peptide probability 0.866, signal anchor probability 0.133) with cleavage site probability 0.736 between residues 33 and 34 TA20940 Later start possible using a downstream methionine codon in the exon I; 1 probable transmembrane helix predicted for TA20940 by TMHMM2.0 at aa 9-27 TA20955 Weak SMART hit (e=0.08) to MIF4G domain, found in eIF4G and other rna-binding proteins TA20965 Shows weak Pfam hit (5.8e-03) to Rhomboid family protein domain; 5 probable transmembrane helices predicted for TA20965 by TMHMM2.0 at aa 210-232, 292-314, 329-351, 376-398 and 413-435 TA20970 Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA20970 by TMHMM2.0 at aa 358-380 TA20980 Contains a putative signal peptide; Signal peptide predicted for TA20980 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 19 and 20 TA20985 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA20985 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.834 between residues 19 and 20 TA20990 Signal peptide predicted for TA20990 by SignalP 2.0 HMM (Signal peptide probability 0.995, signal anchor probability 0.000) with cleavage site probability 0.837 between residues 21 and 22 TA20995 1 probable transmembrane helix predicted for TA20995 by TMHMM2.0 at aa 201-223 TA21005 2 probable transmembrane helices predicted for tmhmm2embl_unknown_000000_1840114_1841707 by TMHMM2.0 at aa 10-32 and 44-66; Signal anchor predicted for TA21005 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.861) with cleavage site probability 0.017 between residues 25 and 26 TA21040 Signal peptide predicted for TA21040 by SignalP 2.0 HMM (Signal peptide probability 0.614, signal anchor probability 0.002) with cleavage site probability 0.277 between residues 15 and 16; GPI-Anchor Signal predicted for TA21040 by DGPI v2.04, no cleavage site predicted TA21045 Contains a putative signal peptide; Signal peptide predicted for TA21045 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18 TA21050 1 probable transmembrane helix predicted for TA21050 by TMHMM2.0 at aa 138-160 TA21055 Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA21055 by TMHMM2.0 at aa 362-384 TA21065 bacterial type gmp reductase TA21085 Alternative gene structure possible TA21100 11 probable transmembrane helices predicted for TA21100 by TMHMM2.0 at aa 61-83, 145-164, 174-196, 203-225, 240-262, 431-453, 468-490, 497-514, 524-546, 551-573 and 583-605 TA21120 Signal peptide predicted for TA21120 by SignalP 2.0 HMM (Signal peptide probability 0.843, signal anchor probability 0.000) with cleavage site probability 0.734 between residues 14 and 15 TA21145 transcriptional regulator, putative TA21155 1 probable transmembrane helix predicted for TA21155 by TMHMM2.0 at aa 34-56 TA21165 2 probable transmembrane helices predicted for TA21165 by TMHMM2.0 at aa 24-46 and 143-165 TA21175 Smaller than other cyclophilins; no Pfam hit to cyclophilin domain but significant hit to rrm domain; thus, annotated as rna-bing protein TA21195 Very weak hit to ZnF_MFX domain; a type of zinc binding domain found in zinc finger proteins; no similarity to other zinc finger proteins; hence, annotated as a hypothetical protein TA21200 Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA21200 by TMHMM2.0 at aa 20-37 TA21205 Signal peptide predicted for TA21205 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.412 between residues 21 and 22 TA21220 Shows moderate Pfam hit(7.0e-05) to UPF0054 domain TA21225 Contains a putative Bromodomain (1.75e-12) and shows weak hit to C2HC type zinc-finger domain (1.67e-01) TA21230 1 probable transmembrane helix predicted for TA21230 by TMHMM2.0 at aa 221-243; Signal peptide predicted for TA21230 by SignalP 2.0 HMM (Signal peptide probability 0.765, signal anchor probability 0.000) with cleavage site probability 0.573 between residues 22 and 23 TA21250 SMART 1 transmembrane domain at aa 89-111; 1 probable transmembrane helix predicted for TA21250 by TMHMM2.0 at aa 89-111 TA21255 Tap404f10.p1c.C.cand.24 - score = 47.17 TA21260 Tap404f10.p1c.cand.118 - score = 43.62; SMART pfam:glutaredoxin (Pf00462) at aa 63-124, E()=1.30e-20; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA21260 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.040) with cleavage site probability 0.652 between residues 24 and 25 TA21265 SMART Tryp_Spc (SM0020) at aa 119-307, E()=2.79e+00 TA21270 Tap404f10.p1c.cand.119 - score = 10.37; SMART pfam:Ribosomal_L10 (PF00466) at aa 55-161, E()=4.10e-02; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA21270 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.630 between residues 22 and 23 TA21275 SMART ZnF_UBP (SM0290) at aa 188-249, E()=1.31e-13; pfam:UCH-1 (unknown) at aa 321-352, E()=6.90e-06; pfam:UCH-2 (unknown) at aa 650-708, E()=8.80e-16 TA21280 SMART 3 transmembrane domains at aa 4-26, 314-336 and 356-378; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA21280 by TMHMM2.0 at aa 4-26, 314-336 and 356-378; Signal anchor predicted for TA21280 by SignalP 2.0 HMM (Signal peptide probability 0.049, signal anchor probability 0.781) with cleavage site probability 0.018 between residues 24 and 25 TA21285 Tap404f10.p1c.C.cand.22 - score = 18.31; SMART RRM (SM0360) at aa 168-241, E()=1.85e-18 TA21290 Tap404f10.p1c.cand.121 - score = 12.93 TA21295 Tap404f10.p1c.C.cand.21 - score = 14.95; SMART DnaJ (SM0271) at aa 72-129, E()=3.27e-18 TA21300 Tap404f10.p1c.cand.122 - score = 17.96 TA21305 Tap404f10.p1c.C.cand.20 - score = 21.42 TA21310 small overlap at the 5' end with gene TA21315 TA21315 1 probable transmembrane helix predicted for TA21315 by TMHMM2.0 at aa 13-35; small overlap at the 5' end with gene TA21310 TA21325 Tap404f10.p1c.C.cand.18 - score = 58.57; SMART STYKc (SM0221) at aa 442-713, E()=2.07e-08 TA21330 Tap404f10.p1c.cand.124 - score = 45.82; SMART pfam:NAD_Gly3P_dh (PF01210) at aa 29-371, E()=2.10e-139 TA21335 Tap404f10.p1c.cand.124 - score = 45.82; SMART 3 TPR (SM0028) domains, at aa 54-87, E()=3.24e-04; 88-121, E()=3.87e-02; 122-155, E()=3.32e+01; Ubox (SM0504) at aa 236-299, E()=6.87e-16 TA21340 Tap404f10.p1c.cand.125 - score = 54.15; SMART pfam:GTP_OBG (PF01018) at aa 81-428, E()=7.30e-31 TA21355 Tap404f10.p1c.cand.126 - score = 28.45; SMART pfam:Ribosomal_L10 (PF0486) at aa 5-107, E()=4.20e-30; pfam:60_S_ribosomal (PF00428) at aa 204-309, E()=2.90e-05 TA21360 Tap404f10.p1c.cand.127 - score = 9.23; SMART pfam:Ribosomal_L38e (PF01781) at aa 2-74, E()=4.50e-12 TA21365 Tap404f10.p1c.C.cand.15 - score = 22.05; SMART pfam:lactamase_B (PF00753) at aa 90-283, E()=4.80e-23 TA21370 SMART 3 transmembrane domains at aa 20-42, 52-71 and 78-100; 3 probable transmembrane helices predicted for TA21370 by TMHMM2.0 at aa 20-42, 52-71 and 78-100; Signal anchor predicted for TA21370 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.843) with cleavage site probability 0.003 between residues 42 and 43 TA21385 Tap404f10.p1c.cand.129 - score = 86.86 TA21390 small overlap at the 3' end with gene TA21395; SMART 2 transmembrane domains at aa 348-370 and 563-585; 2 probable transmembrane helices predicted for TA21390 by TMHMM2.0 at aa 348-370 and 563-585 TA21395 small overlap at the 3' end with gene TA21390; SMART 1 transmembrane domain at aa 15-37; 1 probable transmembrane helix predicted for TA21395 by TMHMM2.0 at aa 15-37 TA21400 Tap404f10.p1c. TA21405 SMART AAA (SM0382) at aa 199-338, E()=4.45e-23 TA21410 Tap404f10.p1c.cand.130 - score = 55.90 TA21415 Tap404f10.p1c.C.cand.10 - score = 100.53; SMART pfam:SMC_N (PF02463) at aa 72-233, E()=9.90e-37; pfam:SMC_C (PF02483) at aa 1067-1291, E()=4.10e-25 TA21420 SMART 2 RRM (SM0360) at aa 26-104, E()=2.56e+00; 130-197, E()=3.04e-05; 1 transmembrane domain at aa 226-248; 1 probable transmembrane helix predicted for TA21420 by TMHMM2.0 at aa 226-248; GPI-Anchor Signal predicted for TA21420 by DGPI v2.04, no cleavage site predicted TA21425 Tap404f10.p1c.C.cand.9 - score = 32.55 TA21430 Tap404f10.p1c.cand.134 - score = 101.54; GPI-Anchor Signal predicted for TA21430 by DGPI v2.04 with cleavage site probability 0.2924 near 1292 TA21435 Tap404f10.p1c.cand.135 - score = 68.53; Tap404f10.p1c.cand.135 - score = 68.53; SMART SET (SM0317) at aa 703-834, E()=5.50e-20 TA21440 Tap404f10.p1c.C.cand.8 - score = 14.15 TA21445 Tap404f10.p1c.C.cand.7 - score = 32.55; SMART pfam:GTP1_OBG (PF01018) at aa 1-268, E()=2.40e-124; pfam:TGS (PF02824) at aa 287-365, E()=4.50e-33 TA21450 Tap404f10.p1c.cand.136 - score = 78.21; SMART pfam:GTP_EFTU (PF00009) at aa 97-395, E()=1.90e-82; pfam:GTP_EFTU_D2 (PF03144) at aa 445-523, E()=5.10e-21; pfam:EFG_C (PF00679) at aa 644-816, E()=1.70e-76; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA21450 by SignalP 2.0 HMM (Signal peptide probability 0.158, signal anchor probability 0.765) with cleavage site probability 0.130 between residues 24 and 25 TA21455 Tap404f10.p1c.C.cand.6 - score = 26.01; SMART pfam:zf-MYND (PF01753) at aa 243-282, E()=1.20e-09 TA21460 Tap404f10.p1c.C.cand.5 - score = 24.13; SMART pfam:TCTP (PF00838) at aa 1-170, E()=9.50e-39 TA21465 Tap404f10.p1c.cand.137 - score = 126.63 TA21470 Tap404f10.p1c.cand.137 - score = 126.63; SMART 7 MORN (SM0698) domains at aa 541-562, E()=1.73e+00; 564-585, E()=8.22e-06; 586-607, E()=2.90e-01; 608-629, E()=3.37e-02; 635-652, E()=2.09e+01; 677-698, E()=7.31e-01 and 838-859, E()=1.12e+00; Signal peptide predicted for TA21470 by SignalP 2.0 HMM (Signal peptide probability 0.924, signal anchor probability 0.019) with cleavage site probability 0.805 between residues 26 and 27 TA21475 Tap404f10.p1c.C.cand.4 - score = 20.35 TA21480 Tap404f10.p1c.cand.138 - score = 42.79 TA21485 Tap404f10.p1c.cand.139 - score = 14.27 TA21490 Tap404f10.p1c.cand.140 - score = 32.74; SMART pfam:UPF0034 (unknown) at aa 29-326, E()=5.20e-50 TA21495 Tap404f10.p1c.cand.141 - score = 17.19 TA21500 Tap404f10.p1c.cand.141 - score = 17.19; SMART pfam:KE2 (PF01920) at aa 2-108, E()=4.70e-06 TA21505 Tap404f10.p1c.C.cand.3 - score = 49.14 TA21510 Tap404f10.p1c.C.cand.2 - score = 68.47; SMART 11 transmembrane domains at aa 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361, 554-576, 1751-1769, 1877-1899 and 1914-1936; 12 probable transmembrane helices predicted for TA21510 by TMHMM2.0 at aa 25-47, 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361, 554-576, 1751-1769, 1877-1899 and 1914-1936; Signal anchor predicted for TA21510 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.985) with cleavage site probability 0.000 between residues 49 and 50 TA21515 SMART 8 transmembrane domains at aa 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361 and 554-576; 12 probable transmembrane helices predicted for TA21515 by TMHMM2.0 at aa 25-47, 77-96, 101-123, 129-151, 210-232, 259-281, 302-324, 339-361, 554-576, 1751-1769, 1877-1899 and 1914-1936; Signal anchor predicted for TA21515 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.985) with cleavage site probability 0.000 between residues 49 and 50 TA19695 Weak SMART hit (7.9e-01) to MATH (meprin & TRAF homology domain; part of the protein has considerable similarity to P. falciparum hypothetical protein pfe0570W TA19685 Signal peptide predicted for TA19685 by SignalP 2.0 HMM (Signal peptide probability 0.927, signal anchor probability 0.000) with cleavage site probability 0.398 between residues 21 and 22 TA19650 1 probable transmembrane helix predicted for TA19650 by TMHMM2.0 at aa 30-52; Signal peptide predicted for TA19650 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.264) with cleavage site probability 0.664 between residues 51 and 52 TA19645 4 probable transmembrane helices predicted for TA19645 by TMHMM2.0 at aa 117-139, 203-225, 297-319 and 332-354 TA19635 Signal peptide predicted for TA19635 by SignalP 2.0 HMM (Signal peptide probability 0.906, signal anchor probability 0.000) with cleavage site probability 0.389 between residues 26 and 27 TA19620 Alternative gene structure possible; 1 or more introns possible in exon 9 in the current gene model; contains 5 putative transmembrane domains; 6 probable transmembrane helices predicted for TA19620 by TMHMM2.0 at aa 144-166, 222-244, 251-273, 383-405, 452-474 and 489-511 TA19610 Contains conserved domain; weak Pafm hit (9.3e-01) to DUF164 domain TA19605 Weak Pfam hit (3.9e-02) to mRNA_triPase domain TA19600 Signal peptide predicted for TA19600 by SignalP 2.0 HMM (Signal peptide probability 0.608, signal anchor probability 0.198) with cleavage site probability 0.308 between residues 24 and 25 TA19580 Contains putative WD40 repeat domains; Shows weak Pfam hit (2.3e-03) to CCCH type zinc finger domain TA19575 TapCf04.q1c.cand.104 - score = 33.11 TA19565 TapCf04.q1c.cand.102 - score = 36.30 TA19545 TapCf04.q1c.C.cand.18 - score = 95.61 TA19540 TapCf04.q1c.C.cand.19 - score = 12.00 TA19525 Contains putative WD40 domains TA19485 TapCf04.q1c.cand.98 - score = 35.99 TA19480 2 probable transmembrane helices predicted for TA19480 by TMHMM2.0 at aa 392-414 and 441-463 TA19475 3 probable transmembrane helices predicted for TA19475 by TMHMM2.0 at aa 26-45, 60-82 and 95-117; Signal anchor predicted for TA19475 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.980) with cleavage site probability 0.006 between residues 46 and 47 TA19465 Weak SMART hit to CNH kinase domain TA19460 Weak SMART & Pfam hit to serine-Threonine protein kinase domain at the C-terminal end of this hypothetical protein; it is possible that this coding exons may code for 2-3 separate hypothetical genes TA19440 Signal peptide predicted for TA19440 by SignalP 2.0 HMM (Signal peptide probability 0.882, signal anchor probability 0.027) with cleavage site probability 0.650 between residues 18 and 19 TA19425 Contains Bromodomain (Pfam & SMART hits) TA19410 Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA19410 by TMHMM2.0 at aa 143-165 TA19400 Contains possible LisH-like and WD40 domains TA19370 Several FATSA hits to possible GTP-binding proteins TA19365 Contains a putative signal sequence; Signal peptide predicted for TA19365 by SignalP 2.0 HMM (Signal peptide probability 0.954, signal anchor probability 0.000) with cleavage site probability 0.933 between residues 22 and 23 TA19360 Contains 1 putative transmembrane domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA19360 by TMHMM2.0 at aa 12-34; Signal anchor predicted for TA19360 by SignalP 2.0 HMM (Signal peptide probability 0.097, signal anchor probability 0.841) with cleavage site probability 0.069 between residues 30 and 31 TA19355 Contains significant SMART hit to actin domain TA19345 Contains siginifant hit(3.8e-38) to Pfam N-terminal NifU-like domain (ExonII) and moderate Pfam hit (5.6e-04) to RNAse_P_Rpp14 domain (ExonI); it is possible that the 2 exons code for 2 separate proteins: the exonI containing gene codes for a RNAseP-related protein and the Exon II containing gene codes for a NifU-like protein (appropriate gene models for such a case are indicated as misc. features; however, in that circumstances, there will be a 4 bp overlap between the end & beginning of the 2 adjacent genes!) TA19340 The amino acid residues that have been shown to be important for cyclosporin-binding (Berriman et al 1998; PMID:9716503) are not conserved in this cyclophilin; thus no EC number was not assigned at the time of annotation; if it was enzymatically active then the designated EC_number would have been 5.2.1.8 TA19320 Signal peptide predicted for TA19320 by SignalP 2.0 HMM (Signal peptide probability 0.918, signal anchor probability 0.027) with cleavage site probability 0.321 between residues 27 and 28 TA19290 1 probable transmembrane helix predicted for TA19290 by TMHMM2.0 at aa 10-32 TA19275 Contains a putative signal sequence; Signal peptide predicted for TA19275 by SignalP 2.0 HMM (Signal peptide probability 0.989, signal anchor probability 0.000) with cleavage site probability 0.731 between residues 21 and 22 TA19270 Predominantly plant-type 2-cys peroxiredoxin TA19265 5 probable transmembrane helices predicted for TA19265 by TMHMM2.0 at aa 34-56, 63-85, 100-122, 129-151 and 171-193 TA19255 Signal peptide predicted for TA19255 by SignalP 2.0 HMM (Signal peptide probability 0.741, signal anchor probability 0.166) with cleavage site probability 0.553 between residues 26 and 27 TA19245 Signal peptide predicted for TA19245 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.841 between residues 19 and 20 TA19235 13 probable transmembrane helices predicted for TA19235 by TMHMM2.0 at aa 9-31, 597-619, 632-654, 699-721, 783-805, 837-856, 877-899, 933-955, 972-994, 1009-1028, 1105-1127, 1171-1193 and 1216-1238; Signal anchor predicted for TA19235 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.861) with cleavage site probability 0.032 between residues 30 and 31 TA19230 Signal peptide predicted for TA19230 by SignalP 2.0 HMM (Signal peptide probability 0.784, signal anchor probability 0.000) with cleavage site probability 0.297 between residues 19 and 20 TA19215 10 probable transmembrane helices predicted for TA19215 by TMHMM2.0 at aa 7-29, 94-116, 137-159, 169-188, 193-212, 216-238, 327-349, 359-378, 431-453 and 468-490 TA19210 Weak similarity (4.5e-04)to Pfam & SMART MACPF (membrane attack complex perforin function); contains a putative signal sequence; alternative gene emodel possible; existence of the first three exons uncertain TA19200 Contains a putative signal peptide TA19195 The intron between ExonII & ExonIII is unsure; alternative gene model possible; 1 probable transmembrane helix predicted for TA19195 by TMHMM2.0 at aa 2-24; Signal peptide predicted for TA19195 by SignalP 2.0 HMM (Signal peptide probability 0.948, signal anchor probability 0.002) with cleavage site probability 0.552 between residues 20 and 21 TA19190 Contains repeats TA19160 Annotation is based on significant Pfam & SMART hits to UBX & UAS domains TA19135 Could a part of the previous gene TA19130 Existence of the last 2 exons uncertain TA19120 This hypothetical protein may have 1 or more downstream exons TA19080 Existence of Exon I is doubtfull TA19075 Contains a putative signal sequence; one small intron possible; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19075 by SignalP 2.0 HMM (Signal peptide probability 0.970, signal anchor probability 0.029) with cleavage site probability 0.650 between residues 27 and 28 TA19065 Contains WD40 repeat elements TA19055 Contains WD40 repeat elements TA19045 Weak Pfam hit to ribosomal L32P protein family, BLAST similarities to chloroplast 50s ribosomal protein l32; however, the evidence is not strong enough to call it a ribosomal L32-related protein; Signal peptide predicted for TA19045 by SignalP 2.0 HMM (Signal peptide probability 0.817, signal anchor probability 0.000) with cleavage site probability 0.301 between residues 15 and 16 TA19020 Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA19020 by TMHMM2.0 at aa 13-35 TA19015 It is possible that this hypothetical protein is composed of 2 hypothetical proteins, the first 9 exons represent the first hypothetical protein and the last three exons representing the other hypothetical protein; Part of the protein is similar to Plasmodium falciparum hypothetical protein pfe1320W TA19010 1 probable transmembrane helix predicted for TA19010 by TMHMM2.0 at aa 9-31 TA18995 GPI-Anchor Signal predicted for TA18995 by DGPI v2.04 with cleavage site probability 0.15599999 near 526 TA18990 The first ~150 amino acids don't show any conservedness with other DNA-directed RNA polymerase alpha chains; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA18990 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA18990 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.003) with cleavage site probability 0.785 between residues 20 and 21 TA18985 No significant SMART / Pfam hit but hightly conserved with several other hypothetical proteins from diverse organisms, alternative gene model possible with the last exon being completely different; the first exon may code for a a seperate hypothetical protein; the conserved residues start from exon II in the present model TA18975 Although this protein shows FASTA and BLAST similarity to SMC proteins, there is no hit in Pfam database for SMC_N & SMC_C domains; thus this protein is annotated as possible SMC-like protein TA18965 10 probable transmembrane helices predicted for TA18965 by TMHMM2.0 at aa 16-38, 48-70, 91-113, 128-150, 190-212, 253-275, 280-299, 309-328, 348-362 and 367-389; Signal anchor predicted for TA18965 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.988) with cleavage site probability 0.004 between residues 32 and 33; GPI-Anchor Signal predicted for TA18965 by DGPI v2.04 with cleavage site probability 0.12900001 near 370 TA18960 Weak Pfam hit to lactamase_B (Metallo beta lactamase superfamily) TA18955 Shows moderate similarities to human / mouse immunoglobulin-binding protein 1 but does not show any Pfam hit TA18940 Strong Pfam hit to methyltransf_5 (MraW methylase family) TA18935 Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18935 by TMHMM2.0 at aa 13-30 and 70-89 TA18930 One intron possible TA18910 One or two additional N-terminal exons possible TA18905 Weak SMART hit to KOW (Kyprides, Ouzounis, Woese) motif TA20080 Contains 1 putative transmembrane domain TA20075 No Pfam hit; So annotated as cytochrome c oxidase assembly protein-like, based on FASTA and BLAST similarities; 1 probable transmembrane helix predicted for TA20075 by TMHMM2.0 at aa 98-120 TA20070 Alternative gene model possible, no hit to SMART / Pfam domains TA20065 Moderate hit to Pfam DUF232 domain TA20055 No SMART / Pfam hit; similarities to methyl transferases and shk1 kinase-binding protein 1 from human and shk1 kinase-binding protein from S. pombe TA20050 Weak hit to von Willebrand Factor type A domain TA20040 Contains 2 putative transmembrane domains and a putative signal peptide; 3 probable transmembrane helices predicted for TA20040 by TMHMM2.0 at aa 13-32, 47-69 and 90-109; Signal anchor predicted for TA20040 by SignalP 2.0 HMM (Signal peptide probability 0.314, signal anchor probability 0.675) with cleavage site probability 0.166 between residues 33 and 34 TA20035 Contains two putative transmembrane domains; 2 probable transmembrane helices predicted for TA20035 by TMHMM2.0 at aa 219-241 and 271-290 TA20030 Contains conserved C-terminus; SMART TA20025 1 probable transmembrane helix predicted for TA20025 by TMHMM2.0 at aa 210-232 TA20015 No Pfam or SMART or TIGRfam hits; so annotated as polynucleotide kinase 3'-phosphatase-like protein, based on the FASTA and BLAST evidence TA20005 Contains RNA-binding HAT (Half A TPR) repeat units, found in RNA-processing proteins TA20000 Contains hits to Pfam RRM and WW domains TA19995 Very wqeak similarity to t-SNARE SMART domain, contains a putative transmembrane domain; 1 probable transmembrane helix predicted for TA19995 by TMHMM2.0 at aa 192-214 TA19975 Contains putative three transmembrane domains, moderatly similar to C-terminal half of P. falciparum hypothetical protein mal6p1.308; 3 probable transmembrane helices predicted for TA19975 by TMHMM2.0 at aa 233-255, 267-289 and 309-328 TA19960 Weak BLAST similarity to Homo sapiens general transcription factor ii-i TA19955 Weak Pfam hit to Nol1_Nop2_SUN family TA19930 Alternative first exon possible; Signal peptide predicted for TA19930 by SignalP 2.0 HMM (Signal peptide probability 0.897, signal anchor probability 0.000) with cleavage site probability 0.536 between residues 26 and 27 TA19915 GPI-Anchor Signal predicted for TA19915 by DGPI v2.04, no cleavage site predicted TA19905 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19905 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.664 between residues 18 and 19 TA19885 Moderate Pfam hit to NifU-like domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19885 by SignalP 2.0 HMM (Signal peptide probability 0.971, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 17 and 18 TA19870 Contains putative signal peptide; 1 probable transmembrane helix predicted for TA19870 by TMHMM2.0 at aa 7-29 TA19865 Signal peptide predicted for TA19865 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.024) with cleavage site probability 0.890 between residues 23 and 24 TA19845 Existence of the intron is uncertain, thus alternative gene model possible; weak similarity to C2H2-zinc finger Pfam domain TA19835 small overlap at the 3' end with gene TA19830 TA19830 Contains Kelch domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA19830 by TMHMM2.0 at aa 424-442; Signal peptide predicted for TA19830 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.341 between residues 22 and 23; small overlap at the 3' end with gene TA19835 TA19820 Contains 1 putative membrane-spanning region; 1 probable transmembrane helix predicted for TA19820 by TMHMM2.0 at aa 5-27 TA19765 Moderate FASTA hit to origin recognition complexes from diverse origin such as P. falciparum, X. laevis and M. musculus TA19760 Signal peptide predicted for TA19760 by SignalP 2.0 HMM (Signal peptide probability 0.900, signal anchor probability 0.026) with cleavage site probability 0.318 between residues 26 and 27 TA19750 Weak match to P. falciparum DNA-directed RNA polymerase beta' chain; 1 probable transmembrane helix predicted for TA19750 by TMHMM2.0 at aa 375-397 TA19745 1 probable transmembrane helix predicted for TA19745 by TMHMM2.0 at aa 2-24 TA19730 TapCf04.q1c.cand.11 - score = 35.73; 1 probable transmembrane helix predicted for TA19730 by TMHMM2.0 at aa 7-29 TA19720 1 probable transmembrane helix predicted for TA19720 by TMHMM2.0 at aa 385-407 TA19670 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA19670 by SignalP 2.0 HMM (Signal peptide probability 0.843, signal anchor probability 0.033) with cleavage site probability 0.520 between residues 23 and 24 TA19555 Similar to several sortilin-like proteins; 1 probable transmembrane helix predicted for TA19555 by TMHMM2.0 at aa 769-788 TA19445 1 probable transmembrane helix predicted for TA19445 by TMHMM2.0 at aa 13-35; GPI-Anchor Signal predicted for TA19445 by DGPI v2.04 with cleavage site probability 0.12900001 near 609 TA19390 1 probable transmembrane helix predicted for TA19390 by TMHMM2.0 at aa 606-628 TA19280 1 probable transmembrane helix predicted for TA19280 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA19280 by SignalP 2.0 HMM (Signal peptide probability 0.838, signal anchor probability 0.022) with cleavage site probability 0.378 between residues 23 and 24 TA19175 10 probable transmembrane helices predicted for TA19175 by TMHMM2.0 at aa 140-162, 174-196, 289-311, 318-340, 397-419, 837-859, 900-922, 959-981, 996-1018 and 1082-1104 TA19170 1 probable transmembrane helix predicted for TA19170 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA19170 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23 TA19115 TapCf04.q1c.C.cand.126 - score = 115.76; Signal anchor predicted for TA19115 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.656) with cleavage site probability 0.195 between residues 28 and 29 TA19005 Signal peptide predicted for TA19005 by SignalP 2.0 HMM (Signal peptide probability 0.751, signal anchor probability 0.000) with cleavage site probability 0.550 between residues 21 and 22 TA18950 1 probable transmembrane helix predicted for TA18950 by TMHMM2.0 at aa 5-22 TA18885 Signal peptide predicted for TA18885 by SignalP 2.0 HMM (Signal peptide probability 0.922, signal anchor probability 0.019) with cleavage site probability 0.757 between residues 21 and 22 TA18880 Signal peptide predicted for TA18880 by SignalP 2.0 HMM (Signal peptide probability 0.662, signal anchor probability 0.001) with cleavage site probability 0.342 between residues 25 and 26 TA18870 1 probable transmembrane helix predicted for TA18870 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA18870 by SignalP 2.0 HMM (Signal peptide probability 0.201, signal anchor probability 0.796) with cleavage site probability 0.081 between residues 25 and 26 TA18865 Proline-rich hypothetical protein; Signal peptide predicted for TA18865 by SignalP 2.0 HMM (Signal peptide probability 0.845, signal anchor probability 0.040) with cleavage site probability 0.798 between residues 21 and 22 TA18860 Signal peptide predicted for TA18860 by SignalP 2.0 HMM (Signal peptide probability 0.977, signal anchor probability 0.020) with cleavage site probability 0.594 between residues 21 and 22 TA18855 Signal peptide predicted for TA18855 by SignalP 2.0 HMM (Signal peptide probability 0.841, signal anchor probability 0.001) with cleavage site probability 0.778 between residues 25 and 26 TA17350 Tap-921d01.p1c.cand.1 - score = 61.16; SMART 11 transmembrane domains at aa 141-160, 175-197, 286-308, 323-345, 401-423, 443-465, 838-860, 901-923, 960-982, 997-1019, 1086-1108; 2 AAA (SM0382) domains at aa 549-736, E()=1.09e+00; 1265-1443, E()=7.27e-07; 11 probable transmembrane helices predicted for TA17350 by TMHMM2.0 at aa 141-160, 175-197, 286-308, 323-345, 401-423, 443-465, 838-860, 901-923, 960-982, 997-1019 and 1086-1108 TA17355 Tap-921d01.p1c.C.cand.10 - score = 111.55; Signal peptide predicted for TA17355 by SignalP 2.0 HMM (Signal peptide probability 0.911, signal anchor probability 0.000) with cleavage site probability 0.889 between residues 20 and 21 TA17485 Signal peptide predicted for TA17485 by SignalP 2.0 HMM (Signal peptide probability 0.642, signal anchor probability 0.311) with cleavage site probability 0.504 between residues 22 and 23 TA17480 TapBAC05a05.q1k.C.cand.5 - score = 38.18; SMART 1 transmembrane domain at aa 15-34; SMART 1 transmembrane domain at aa 21-38; It is possible that this one is a pseudogene as there is a stop codon in the middle of the gene and the present model makes it as a two-exon gene; 1 probable transmembrane helix predicted for TA17480 by TMHMM2.0 at aa 21-38; Signal anchor predicted for TA17480 by SignalP 2.0 HMM (Signal peptide probability 0.007, signal anchor probability 0.658) with cleavage site probability 0.006 between residues 37 and 38 TA17475 Signal peptide predicted for TA17475 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.016) with cleavage site probability 0.564 between residues 21 and 22 TA16055 chr2.cand.535 - hypothetical temomere family protein; Signal peptide predicted for TA16055 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.000) with cleavage site probability 0.696 between residues 25 and 26 TA16050 chr2.cand.534 - signal peptide; Signal peptide predicted for TA16050 by SignalP 2.0 HMM (Signal peptide probability 0.977, signal anchor probability 0.000) with cleavage site probability 0.682 between residues 25 and 26 TA16045 chr2.cand.533 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16045 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.049) with cleavage site probability 0.901 between residues 20 and 21 TA16040 chr2.cand.532 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16040 by SignalP 2.0 HMM (Signal peptide probability 0.915, signal anchor probability 0.000) with cleavage site probability 0.699 between residues 20 and 21 TA16035 chr2.cand.531 - signal peptide, telomere P,Q-rich family TA16030 chr2.cand.530 -signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16030 by SignalP 2.0 HMM (Signal peptide probability 0.780, signal anchor probability 0.065) with cleavage site probability 0.687 between residues 21 and 22 TA16025 chr2.cand.529 - signal peptide, telomere P,Q-rich family; signal peptide, telomere P,Q-rich family; Signal peptide predicted for TA16025 by SignalP 2.0 HMM (Signal peptide probability 0.935, signal anchor probability 0.000) with cleavage site probability 0.723 between residues 18 and 19 TA16020 chr2.cand.528 - signal peptide; secreted protein, putative; Signal peptide predicted for TA16020 by SignalP 2.0 HMM (Signal peptide probability 0.986, signal anchor probability 0.013) with cleavage site probability 0.808 between residues 23 and 24 TA16015 chr2.C.cand.4 - ABC transporter; 10 probable transmembrane helices predicted for TA16015 by TMHMM2.0 at aa 140-162, 174-196, 289-311, 318-340, 397-419, 439-461, 842-859, 904-926, 995-1017 and 1078-1100 TA16010 chr2.cand.527 - signal peptide, hypothetical protein; secreted protein, putative; 1 probable transmembrane helix predicted for TA16010 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA16010 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23 TA16005 signal peptide, transmembrane protein; transmembrane protein, putative; 1 probable transmembrane helix predicted for TA16005 by TMHMM2.0 at aa 405-426; Signal peptide predicted for TA16005 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 18 and 19; GPI-Anchor Signal predicted for TA16005 by DGPI v2.04, no cleavage site predicted TA16000 chr2.cand.525 - 40s ribosomal protein s8 TA15985 all_bases.C.cand.1316 - hypothetical protein TA15980 all_bases.cand.525 - hypothetical protein TA15975 all_bases.C.cand.1317 - serine/threonine protein phosphatase TA15970 chr2.C.cand.8 - CPDc catalytic domain of ctd-like phosphatases TA15965 chr2.C.cand.9 - signal peptide, transmembrane domains; transmembrane protein, putative; 9 probable transmembrane helices predicted for TA15965 by TMHMM2.0 at aa 29-51, 66-85, 92-111, 121-143, 155-174, 189-211, 322-344, 349-371 and 408-430 TA15960 all_bases.cand.524 - signal peptide, PF00248 Aldo/keto reductase family; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15960 by SignalP 2.0 HMM (Signal peptide probability 0.705, signal anchor probability 0.003) with cleavage site probability 0.191 between residues 23 and 24 TA15955 chr2.cand.520 -ABC transporter; 12 probable transmembrane helices predicted for TA15955 by TMHMM2.0 at aa 133-155, 168-190, 195-217, 279-301, 316-338, 390-412, 448-470, 824-846, 896-918, 962-984, 989-1006 and 1071-1093 TA15950 chr2.C.cand.10 - possible signal peptide; secreted protein, putative TA15945 chr2.cand.519 - hypothetical protein TA15935 chr2.C.cand.12 - hypothetical protein TA15930 chr2.cand.517 - glucosamine--fructose-6-phosphate aminotransferase TA15925 chr2.C.cand.13 - calcium binding protein; calcium binding protein TA15920 all_bases.cand.519 - RNA binding protein; 1 probable transmembrane helix predicted for TA15920 by TMHMM2.0 at aa 52-74 TA15915 hypothetical protein, conserved TA15910 chr2.C.cand.14 - hypothetical transmembrane protein, conserved; 4 probable transmembrane helices predicted for TA15910 by TMHMM2.0 at aa 1120-1142, 1162-1184, 1204-1226 and 1283-1305; Signal peptide predicted for TA15910 by SignalP 2.0 HMM (Signal peptide probability 0.644, signal anchor probability 0.000) with cleavage site probability 0.290 between residues 26 and 27 TA15905 chr2.cand.514 - hypothetical protein TA15900 proteasome subunit alpha type 1 TA15895 chr2.cand.511 - metallo-protease; 5 probable transmembrane helices predicted for TA15895 by TMHMM2.0 at aa 94-116, 126-148, 168-190, 205-224 and 358-380 TA15890 chr2.cand.510 - metalloprotease; 6 probable transmembrane helices predicted for TA15890 by TMHMM2.0 at aa 10-32, 85-107, 172-194, 201-220, 305-324 and 337-359 TA15875 chr2.cand.509 - proteasome subunit alpha type 1 TA15870 chr2.cand.508 - metallo-protease; 4 probable transmembrane helices predicted for TA15870 by TMHMM2.0 at aa 126-148, 168-190, 205-227 and 359-381 TA15865 chr2.C.cand.15 - hypothetical protein, some sim. to phosphoacetylglucosamine mutase TA15860 chr2.cand.507 - signal peptide, hypothetical protein; secreted protein, putative TA15855 prenylated protein, putative; chr2.cand.506 - prenylated protein, putative TA15850 chr2.cand.505 - PF01142 uncharacterized protein family UPF0024; uncharacterized protein family UPF0024 TA15845 chr2.cand.504 - possible signal peptide, conserved hypothetical protein; secreted protein, putative TA15840 all_bases.cand.508 - PF01027 Uncharacterised protein family UPF0005; 7 probable transmembrane helices predicted for TA15840 by TMHMM2.0 at aa 36-53, 57-79, 91-109, 119-141, 148-170, 174-193 and 209-231 TA15835 zinc finger protein, putative; chr2.cand.502 - zinc finger protein TA15830 chr2.cand.501 - score = 18.43 PF01226 formate/nitrate transporter; 6 probable transmembrane helices predicted for TA15830 by TMHMM2.0 at aa 37-59, 69-91, 112-134, 164-186, 193-215 and 241-263 TA15825 chr2.C.cand.17 - PF00004 ATPase family associated with various cellular activities (AAA) TA15820 chr2.cand.500 - hypothetical protein TA15810 hypothetical protein, PF00226 DnaJ domain; small overlap at the 5' end with gene TA15805 TA15805 small overlap at the 3' end with gene TA15810 TA15800 chr2.cand.498 - hypothetical protein TA15795 all_bases.C.cand.1327 - signal peptide, transmembrane; transmembrane protein, putative; 4 probable transmembrane helices predicted for TA15795 by TMHMM2.0 at aa 13-35, 39-56, 63-82 and 102-121 TA15790 chr2.C.cand.19 - ran binding protein, PF00641, Zn finger in Ran binding protein and others TA15785 chr2.C.cand.19 - 5'-3' exonuclease TA15780 chr2.C.cand.19 - hypothetical protein TA15765 chr2.C.cand.20 - hypothetical protein TA15760 all_bases.C.cand.1330 - mono-oxygenase, PF01494 FAD binding domain, PF01360 Monooxygenase; 1 probable transmembrane helix predicted for TA15760 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA15760 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.696) with cleavage site probability 0.025 between residues 35 and 36 TA15755 chr2.cand.496 - hypothetical protein TA15750 actin TA15745 chr2.cand.495 - signal peptide, transmembrane; transmembrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA15745 by TMHMM2.0 at aa 7-26 and 528-547; Signal anchor predicted for TA15745 by SignalP 2.0 HMM (Signal peptide probability 0.023, signal anchor probability 0.937) with cleavage site probability 0.009 between residues 17 and 18 TA15740 chr2.C.cand.24 - PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase TA15725 chr2.C.cand.25 - hypothetical protein TA15720 chr2.C.cand.26 - membrane protein; membrane protein, putative; 13 probable transmembrane helices predicted for TA15720 by TMHMM2.0 at aa 13-30, 60-79, 86-108, 112-134, 147-169, 189-211, 236-258, 273-295, 563-585, 959-981, 1002-1019, 1029-1048 and 1069-1088 TA15710 chr2.cand.492 - signal peptide; secreted protein, putative TA15705 chr2.cand.491 - signal peptide; secreted protein, putative; Signal peptide predicted for TA15705 by SignalP 2.0 HMM (Signal peptide probability 0.600, signal anchor probability 0.030) with cleavage site probability 0.264 between residues 18 and 19 TA15700 chr2.cand.490 - AAA-ATPase, proteasome subunit TA15695 chr2.cand.489 - signal peptide; secreted ptotein TA15690 chr2.cand.488 - signal peptide; secreted protein, putative TA15685 chr2.cand.487 - signal peptide; secreted protein, putative TA15680 chr2.C.cand.29 - hypothetical protein, PF00481 Protein phosphatase 2C domain; PF00481 Protein phosphatase 2C domain TA15670 chr2.cand.485 - hypothetical protein TA15665 chr2.C.cand.32 - PF00112 Papain family cysteine protease; Signal peptide predicted for TA15665 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.260) with cleavage site probability 0.331 between residues 24 and 25 TA15655 hypothetical protein, zinc finger, conserved TA15650 hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA15650 by TMHMM2.0 at aa 10-32, 39-58 and 62-84; Signal anchor predicted for TA15650 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.997) with cleavage site probability 0.000 between residues 37 and 38 TA15645 chr2.C.cand.35 - hypothetical protein TA15640 chr2.C.cand.36 - hypothetical protein, conserved TA15635 chr2.C.cand.37 - hypothetical protein; 2 probable transmembrane helices predicted for TA15635 by TMHMM2.0 at aa 91-109 and 239-261 TA15630 hypothetical telomeric sfii fragment 8-like protein; chr2.C.cand.38 - htsf8 TA15625 chr2.cand.482 - hypothetical protein TA15615 chr2.cand.481 - hypothetical protein TA15610 chr2.C.cand.39 - hypothetical protein; 2 probable transmembrane helices predicted for TA15610 by TMHMM2.0 at aa 40-62 and 72-91 TA15600 hypothetical protein, conserved, pfl0490C TA15595 chr2.cand.480 - hypothetical protein TA15590 chr2.cand.479 - hypothetical protein TA15580 2 probable transmembrane helices predicted for TA15580 by TMHMM2.0 at aa 292-314 and 409-431 TA15570 chr2.cand.475 - score = 16.68; Signal peptide predicted for TA15570 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.956 between residues 17 and 18 TA15565 chr2.cand.474 - score = 11.38 TA15560 chr2.cand.473 - score = 13.66 TA15555 chr2.cand.472 - score = 53.84 TA15545 PF00481 Protein phosphatase 2C, signal sequence TA15540 chr2.C.cand.41 - signal peptide, transmembrane; transmembrane protein, putative; 6 probable transmembrane helices predicted for TA15540 by TMHMM2.0 at aa 13-30, 43-65, 126-143, 153-175, 278-300 and 310-332; Signal anchor predicted for TA15540 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.989) with cleavage site probability 0.002 between residues 30 and 31 TA15535 chr2.C.cand.42 - hypothetical protein TA15530 chr2.C.cand.43 - glyceraldehyde 3-phosphate dehydrogenase TA15525 chr2.C.cand.44 - hypothetical protein TA15520 chr2.C.cand.45 - hypothetical protein TA15515 protein phosphatase pp2a TA15510 chr2.C.cand.46 - hypothetical protein, conserved, pf11_0393 TA15505 Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA15505 by TMHMM2.0 at aa 29-51 and 61-83; Signal anchor predicted for TA15505 by SignalP 2.0 HMM (Signal peptide probability 0.046, signal anchor probability 0.918) with cleavage site probability 0.013 between residues 46 and 47 TA15500 transmembrane; 2 probable transmembrane helices predicted for TA15500 by TMHMM2.0 at aa 53-75 and 931-953 TA15490 3 probable transmembrane helices predicted for TA15490 by TMHMM2.0 at aa 7-29, 33-51 and 72-94; GPI-Anchor Signal predicted for TA15490 by DGPI v2.04 with cleavage site probability 2.4940002 near 97 TA15485 chr2.cand.466 - hypothetical protein, transmembrane; 2 probable transmembrane helices predicted for TA15485 by TMHMM2.0 at aa 95-117 and 170-187 TA15480 signal peptide, transmembrane; 4 probable transmembrane helices predicted for TA15480 by TMHMM2.0 at aa 7-29, 44-66, 129-151 and 171-193 TA15475 all_bases.cand.478 -guanylyl cyclase; 20 probable transmembrane helices predicted for TA15475 by TMHMM2.0 at aa 122-144, 148-170, 351-373, 393-415, 1141-1163, 1173-1195, 1226-1248, 1263-1285, 1290-1312, 1327-1349, 1457-1479, 1489-1511, 1518-1537, 1552-1574, 1587-1609, 2125-2147, 2160-2182, 2197-2219, 2252-2274 and 2284-2301 TA15470 small overlap at the 3' end with gene TA15465 TA15465 small overlap at the 3' end with gene TA15470 TA15460 all_bases.C.cand.1354 - hypothetical protein, signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA15460 by TMHMM2.0 at aa 152-174 TA15455 all_bases.cand.476 - hypothetical protein TA15450 chr2.C.cand.52 - hypothetical protein, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15450 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.000) with cleavage site probability 0.375 between residues 21 and 22; GPI-Anchor Signal predicted for TA15450 by DGPI v2.04, no cleavage site predicted TA15445 chr2.cand.460 - transmembrane protein; 9 probable transmembrane helices predicted for TA15445 by TMHMM2.0 at aa 15-34, 92-111, 121-140, 147-169, 184-203, 233-255, 307-326, 347-369 and 379-401 TA15435 chr2.cand.459 - hypothetical protein TA15430 PF02252 Proteasome activator pa28 beta subunit TA15425 1 probable transmembrane helix predicted for TA15425 by TMHMM2.0 at aa 5-27 TA15420 chr2.cand.454 - DNA primase small subunit; chr2.cand.455 - score = 10.85 TA15415 chr2.cand.453 - hypothetical protein, low similarity to ss-binding protein; Signal peptide predicted for TA15415 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 18 and 19 TA15410 chr2.C.cand.53 - PF00025 ADP-ribosylation factor family TA15405 1 probable transmembrane helix predicted for TA15405 by TMHMM2.0 at aa 58-80 TA15400 1 probable transmembrane helix predicted for TA15405 by TMHMM2.0 TA15395 chr2.C.cand.54 - myb/SANT DNA binding motifs; DNA-binding protein, putative; 1 probable transmembrane helix predicted for TA15395 by TMHMM2.0 at aa 7-29 TA15390 1 probable transmembrane helix predicted for TA15390 by TMHMM2.0 at aa 209-231 TA15380 chr2.C.cand.55 - PF01066 CDP-alcohol phosphatidyltransferase; 4 probable transmembrane helices predicted for TA15380 by TMHMM2.0 at aa 20-42, 91-113, 140-162 and 182-201 TA15375 chr2.C.cand.56 -snap protein TA15370 chr2.C.cand.57 - WW, FF domains TA15365 chr2.C.cand.58 - Cytidylyltransferase TA15355 chr2.cand.452 - score = 6.55 TA15350 chr2.cand.451 - score = 12.14 TA15345 chr2.cand.450 - score = 34.02; 1 probable transmembrane helix predicted for TA15345 by TMHMM2.0 at aa 512-534 TA15340 1 probable transmembrane helix predicted for TA15340 by TMHMM2.0 at aa 15-36; Signal anchor predicted for TA15340 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.721) with cleavage site probability 0.001 between residues 31 and 32 TA15335 all_bases.cand.1290 - ubiquitin carboxyl-terminal hydrolase, zinc finger TA15330 chr2.C.cand.61 - rna binding protein; SR protein, putative TA15325 hypothetical protein; 1 probable transmembrane helix predicted for TA15325 by TMHMM2.0 at aa 785-807 TA15315 2 probable transmembrane helices predicted for TA15315 by TMHMM2.0 at aa 50-72 and 93-115 TA15310 chr2.C.cand.63 - score = 25.02; 1 probable transmembrane helix predicted for TA15310 by TMHMM2.0 at aa 249-271 TA15305 chr2.C.cand.64 - signal peptide; Signal peptide predicted for TA15305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.002) with cleavage site probability 0.635 between residues 22 and 23 TA15300 PF01535 PPR repeat TA15295 chr2.C.cand.67 - hypothetical protein TA15290 chr2.C.cand.68 - hypothetical protein TA15285 chr2.cand.448 - signal peptide; secreted protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA15285 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 15 and 16 TA15270 hypothetical protein, conserved, mal13p1.159 TA15265 chr2.C.cand.69 - signal peptide; secreted protein, putative; 1 probable transmembrane helix predicted for TA15265 by TMHMM2.0 at aa 12-29; Signal peptide predicted for TA15265 by SignalP 2.0 HMM (Signal peptide probability 0.952, signal anchor probability 0.047) with cleavage site probability 0.555 between residues 34 and 35 TA15260 chr2.C.cand.70 - hypothetical protein TA15255 chr2.cand.447 - farnesyltransferase beta subunit TA15250 chr2.C.cand.71 - hypothetical protein, PF03133 Tubulin-tyrosine ligase family TA15245 chr2.C.cand.72 - hypothetical protein TA15235 chr2.cand.445 - score = 6.38; 1 probable transmembrane helix predicted for TA15235 by TMHMM2.0 at aa 10-32 TA15230 RNA binding protein TA15225 chr2.cand.442 - hypothetical protein, conserved, pfe1175W TA15215 chr2.cand.441 - ATP synthase subunit C, signal peptide, mitochondrial; 2 probable transmembrane helices predicted for TA15215 by TMHMM2.0 at aa 93-115 and 135-157; GPI-Anchor Signal predicted for TA15215 by DGPI v2.04, no cleavage site predicted TA15210 chr2.C.cand.74 - 60S ribosomal subunit protein l18b TA15205 htsf20p3-like TA15195 chr2.cand.439 - hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA15195 by TMHMM2.0 at aa 217-239; Signal peptide predicted for TA15195 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.000) with cleavage site probability 0.477 between residues 15 and 16 TA15190 chr2.cand.438 - rab TA15185 chr2.cand.437 - hypothetical protein, conserved,mal6p1.300, PF01171 PP-loop family UPF0021 TA15180 chr2.cand.436 - hypothetical protein TA15175 zinc finger protein TA15170 zinc finger protein TA15165 chr2.cand.434 - score = 22.10 TA15160 chr2.C.cand.79 - score = 13.12 TA15155 chr2.C.cand.80 - score = 27.35 TA15150 chr2.C.cand.81 - score = 6.80; 2 probable transmembrane helices predicted for TA15150 by TMHMM2.0 at aa 21-43 and 48-70; Signal anchor predicted for TA15150 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.829) with cleavage site probability 0.000 between residues 16 and 17 TA15145 chr2.cand.433 - transmembrane; membrane protein, putative; 5 probable transmembrane helices predicted for TA15145 by TMHMM2.0 at aa 133-155, 243-265, 280-302, 309-331 and 367-389 TA15140 chr2.C.cand.82 - score = 15.65 TA15135 chr2.C.cand.83 - score = 21.23 TA15130 chr2.cand.432 - score = 7.52 TA15125 hypothetical protein, PI3Kc Phosphoinositide 3-kinase, catalytic domain; 5 probable transmembrane helices predicted for TA15125 by TMHMM2.0 at aa 198-220, 506-528, 678-700, 768-790 and 957-979 TA15120 all_bases.cand.1308 - similar to chromosome assembly protein TA15105 chr2.cand.429 - score = 10.05 PF01265 cytochrome c/c1 heme lyase TA15100 chr2.C.cand.85 - score = 18.79 TA15095 chr2.cand.428 - score = 39.12 TA15085 chr2.cand.427 - score = 63.23; 2 probable transmembrane helices predicted for TA15085 by TMHMM2.0 at aa 785-807 and 843-862 TA15080 1 probable transmembrane helix predicted for TA15080 by TMHMM2.0 at aa 148-167 TA15075 chr2.cand.426 - phosphatidylinositol/phosphatidylcholine transfer protein TA15070 very hypothetical protein, but gene in this region somewhere TA15065 chr2.cand.425 - ribosomal protein s2 TA15055 chr2.C.cand.87 - signal peptide; secreted protein, putative; Signal peptide predicted for TA15055 by SignalP 2.0 HMM (Signal peptide probability 0.902, signal anchor probability 0.000) with cleavage site probability 0.732 between residues 17 and 18 TA15050 chr2.cand.424 - hypothetical protein TA15045 chr2.cand.423 - hypothetical protein TA15040 PF01529 DHHC zinc finger domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA15040 by SignalP 2.0 HMM (Signal peptide probabilty 0.003, signal anchor probability 0.601) with cleavage site probability 0.001 between residues 26 and 27; 2 probable transmembrane helices predicted for TA15040 by TMHMM2.0 at aa 78-100 and 120-142 TA15035 chr2.C.cand.88 - hypothetical protein TA15030 chr2.C.cand.88 - mitochondrial/apicoplast ribosomal protein l7/l12 TA15025 chr2.C.cand.89 - hypothetical protein TA15020 chr2.C.cand.90 - hypothetical protein TA15015 small overlap at the 5' end with gene TA15010 TA15010 small overlap at the 5' end with gene TA15015 TA14990 chr2.cand.419 - hypothetical membrane protein, similarity to ATPases; 9 probable transmembrane helices predicted for TA14990 by TMHMM2.0 at aa 69-91, 101-123, 420-442, 446-468, 1082-1104, 1109-1131, 1161-1183, 1213-1235 and 1248-1267 TA14985 chr2.C.cand.95 - PF00521 DNA gyrase/topoisomerase IV, subunit A; Signal peptide predicted for TA14985 by SignalP 2.0 HMM (Signal peptide probability 0.722, signal anchor probability 0.000) with cleavage site probability 0.263 between residues 22 and 23 TA14980 chr2.cand.418 - transmembrane; membrane protein, putative; 2 probable transmembrane helices predicted for TA14980 by TMHMM2.0 at aa 283-305 and 379-401 TA14975 chr2.C.cand.96 - PF01399 PCI domain TA14970 chr2.C.cand.98 - translation initiation factor eif-1a TA14965 chr2.cand.417 - PF01000 RNA polymerase Rpb3/RpoA insert domain TA14960 chr2.C.cand.99 - hypothetical protein TA14955 chr2.C.cand.101 - hypothetical protein, signal peptide; hypothetical protein, signal peptide; Signal peptide predicted for TA14955 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.980 between residues 19 and 20 TA14950 chr2.C.cand.102 - transmembrane; membrane protein, putative; 10 probable transmembrane helices predicted for TA14950 by TMHMM2.0 at aa 21-38, 73-90, 97-119, 129-148, 155-177, 192-214, 334-353, 368-390, 403-425 and 468-490 TA14945 chr2.C.cand.103 - signal peptide; secreted protein, putative; Signal peptide predicted for TA14945 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.004) with cleavage site probability 0.495 between residues 20 and 21 TA14940 all_bases.cand.1326 - hypothetical protein TA14935 chr2.C.cand.106 - mitochondrial ribosomal protein s14 precursor, putative TA14930 chr2.cand.415 - hypothetical protein TA14925 chr2.cand.414 - hypothetical protein TA14920 chr2.C.cand.107 - organellar heat shock protein, hsp70 TA14915 chr2.cand.413 - hypothetical protein TA14910 chr2.cand.412 - hypothetical protein TA14905 chr2.C.cand.109 - eukaryotic peptide chain release factor TA14900 all_bases.C.cand.493 - PF03178 CPSF A subunit region TA14885 chr2.C.cand.110 - hypothetical protein TA14880 chr2.cand.410 - PF00152 tRNA synthetases class II (D, K and N) TA14875 chr2.C.cand.111 - hypothetical protein TA14870 chr2.cand.409 - hypothetical protein TA14865 ankyrin repeat protein, putative; chr2.cand.408 - PF00023 Ankyrin repeat TA14860 chr2.C.cand.112 - score = 39.77hypothetical protein, conserved, pfe0995C TA14855 chr2.cand.407 - PF02338 OTU-like cysteine protease, not good gene model; OTU-like cysteine protease, putative TA14850 PF00535 Glycosyl transferase TA14845 chr2.C.cand.114 - hypothetical protein TA14840 chr2.cand.406 - TpR-like protein; 2 probable transmembrane helices predicted for TA14840 by TMHMM2.0 at aa 21-43 and 591-613 TA14835 chr2.cand.405 - hypothetical protein TA14830 chr2.C.cand.115 - G-beta protein TA14825 chr2.C.cand.116 - ABC transporter; 5 probable transmembrane helices predicted for TA14825 by TMHMM2.0 at aa 54-76, 96-113, 173-195, 199-221 and 320-342 TA14820 all_bases.cand.1338 - PF01652 Eukaryotic initiation factor 4E TA14815 chr2.C.cand.118 - WD40 G-beta protein; G-beta protein, putative TA14810 chr2.cand.404 - transmembrane; membrane protein, putative; 8 probable transmembrane helices predicted for TA14810 by TMHMM2.0 at aa 37-56, 66-88, 124-143, 153-172, 185-207, 238-260, 320-342 and 418-437 TA14805 chr2.cand.403 - hypothetical protein TA14800 chr2.cand.402 -small nuclear ribonucleoprotein TA14795 chr2.C.cand.119 - ATP-dependent RNA helicase TA14790 chr2.cand.401 - camp-dependent protein kinase, beta-catalytic subunit TA14780 1 probable transmembrane helix predicted for TA14780 by TMHMM2.0 at aa 49-71; Signal anchor predicted for TA14780 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.986) with cleavage site probability 0.000 between residues 20 and 21 TA14775 chr2.C.cand.122 - glycerol kinase, PF00370 FGGY family of carbohydrate kinases, N-terminal domain, PF02782 FGGY family of carbohydrate kinases, C-terminal domain TA14770 chr2.cand.400 - hypothetical protein, conserved, mal13p1.260 TA14765 chr2.C.cand.123 - signal peptide; hypothetical protein, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14765 by SignalP 2.0 HMM (Signal peptide probability 0.943, signal anchor probability 0.014) with cleavage site probability 0.920 between residues 23 and 24 TA14760 all_bases.cand.1344 - hypothetical protein, conserved, mal6p1.224 TA14755 chr2.cand.399 - hypothetical protein TA14750 chr2.cand.398 - 60S ribosomal protein L17 TA14745 hypothetical protein, conserved; chr2.C.cand.124 - hypothetical protein, low similarity with mal13p1.259, membrane; 5 probable transmembrane helices predicted for TA14745 by TMHMM2.0 at aa 46-68, 81-103, 123-145, 312-334 and 360-379; GPI-Anchor Signal predicted for TA14745 by DGPI v2.04, no cleavage site predicted TA14740 chr2.cand.397 - hypothetical protein TA14735 all_bases.C.cand.479 - calmodulin TA14720 chr2.C.cand.125 - PF02121 Phosphatidylinositol transfer protein, PF00169 PH domain; Phosphatidylinositol transfer protein, putative TA14715 all_bases.C.cand.478 - hypothetical protein TA14710 all_bases.C.cand.477 - hypothetical protein TA14705 all_bases.cand.1347 - signal peptide, low sim. to ribosome recycling factor; hypothetical protein, signal peptide; 2 probable transmembrane helices predicted for TA14705 by TMHMM2.0 at aa 4-23 and 30-52 TA14695 all_bases.cand.1348 - score = 61.69 PF01926 Gtpase of unknown function TA14690 all_bases.cand.1349 - acyl carrier protein, signal sequence, apicoplast, PF00550 Phosphopantetheine attachment site; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14690 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.006) with cleavage site probability 0.912 between residues 24 and 25 TA14685 chr2.C.cand.131 - PF00022 actin TA14680 chr2.cand.392 - signal peptide, hypothetical protein; 1 probable transmembrane helix predicted for TA14680 by TMHMM2.0 at aa 5-27 TA14675 chr2.cand.391 - signal peptide; secreted protein, putative; Signal peptide predicted for TA14675 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.876 between residues 18 and 19 TA14665 chr2.C.cand.133 - signal peptide, hypothetical protein; 1 probable transmembrane helix predicted for TA14665 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA14665 by SignalP 2.0 HMM (Signal peptide probability 0.833, signal anchor probability 0.167) with cleavage site probability 0.353 between residues 22 and 23 TA14660 chr2.cand.390 - hypothetical protein TA14655 all_bases.cand.1352 - signal peptide, transmembrane domains; membrane protein, putative; 12 probable transmembrane helices predicted for TA14655 by TMHMM2.0 at aa 33-51, 82-101, 108-127, 131-148, 155-177, 202-224, 236-258, 278-300, 320-351, 384-403, 447-469 and 484-506 TA14650 chr2.C.cand.135 - protein transport protein sec23 TA14645 chr2.C.cand.136 - transmembrane domains; 10 probable transmembrane helices predicted for TA14645 by TMHMM2.0 at aa 22-44, 153-175, 185-207, 214-236, 256-278, 408-430, 445-467, 522-544, 564-586 and 593-612 TA14640 chr2.C.cand.137 - small nuclear ribonucleoprotein TA14635 3 probable transmembrane helices predicted for TA14635 by TMHMM2.0 at aa 62-84, 145-167 and 212-234 TA14630 chr2.cand.389 - hypothetical protein TA14625 chr2.C.cand.139 - protein kinase TA14620 chr2.C.cand.140 - hypothetical protein TA14615 chr2.cand.388 - hypothetical protein TA14610 chr2.C.cand.141 - GTPase activator, PF00566 TBC domain TA14605 chr2.cand.387 - hypothetical protein; 1 probable transmembrane helix predicted for TA14605 by TMHMM2.0 at aa 460-482 TA14595 chr2.C.cand.142 - hypothetical protein TA14590 chr2.C.cand.143 - ubiquitin-activating enzyme e1 TA14580 chr2.cand.384 - transmembrane protein; membrane protein. putative; 2 probable transmembrane helices predicted for TA14580 by TMHMM2.0 at aa 218-240 and 261-283 TA14575 chr2.C.cand.147 - PF01026 TatD related DNase TA14570 all_bases.cand.1363 - kinesin-like protein, kinesin motor domain TA14560 all_bases.C.cand.466 - hypothetical protein TA14555 chr2.C.cand.149 - AAA-atpase TA14545 chr2.C.cand.151 - signal peptide; Signal peptide predicted for TA14545 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.005) with cleavage site probability 0.636 between residues 18 and 19 TA14540 membrane protein, putative; chr2.cand.380 - transmembrane domains; 10 probable transmembrane helices predicted for TA14540 by TMHMM2.0 at aa 32-54, 123-145, 155-177, 184-206, 221-243, 521-543, 553-575, 630-652, 672-694 and 701-723 TA14535 chr2.cand.379 - signal peptide, apicoplast target sequence, PF00830 Ribosomal L28 family TA14525 chr2.cand.378 - PF01873 Domain found in IF2B/IF5 TA14520 chr2.cand.378 - hypothetical protein, conserved, pfl2150C TA14515 chr2.cand.376 - hypothetical protein, conserved, pf14_0413 TA14500 chr2.C.cand.152 - hypothetical protein TA14495 chr2.cand.375 - membrane protein; membrane protein; 10 probable transmembrane helices predicted for TA14495 by TMHMM2.0 at aa 5-23, 120-142, 149-171, 186-208, 253-275, 290-312, 315-337, 342-364, 376-398 and 408-427 TA14490 chr2.cand.374 - membrane protein; membrane protein; 10 probable transmembrane helices predicted for TA14490 by TMHMM2.0 at aa 28-50, 102-124, 174-193, 208-230, 358-377, 392-414, 416-438, 443-465, 477-499 and 509-531; Signal anchor predicted for TA14490 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.980) with cleavage site probability 0.001 between residues 47 and 48 TA14485 chr2.cand.373 - transmembrane protein; membrane protein, putative; 11 probable transmembrane helices predicted for TA14485 by TMHMM2.0 at aa 5-23, 90-112, 119-141, 151-170, 183-205, 332-354, 367-389, 393-415, 420-442, 452-474 and 487-506 TA14480 WD40 repeat protein TA14475 chr2.C.cand.155 - WD40 protein TA14470 chr2.cand.371 - score = 36.55 vacuolar sorting domain TA14465 chr2.C.cand.156 - signal peptide, PF01553 Acyltransferase; 1 probable transmembrane helix predicted for TA14465 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA14465 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 29 and 30 TA14455 chr2.cand.370 - signal peptide, apicoplast targetting sequence, 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14455 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.702 between residues 16 and 17 TA14450 chr2.cand.369 - Citrate synthase, mitochondrial precursor TA14445 conserved hypothetical protein, DUF279 TA14440 chr2.cand.368 - PF02441 Flavoprotein TA14435 chr2.C.cand.157 - serine/threonine protein kinase TA14430 all_bases.cand.1372 - mitotic checkpoint protein, WD40 protein TA14425 all_bases.C.cand.452 - beta transducin, WD40 protein TA14420 chr2.C.cand.160 - cleavage stimulation factor subunit 1, WD40 domains TA14415 chr2.cand.365 - choline/ethanolamine kinase TA14410 chr2.cand.364 - PF01633 Choline/ethanolamine kinase TA14405 chr2.cand.363 - choline/ethanolamine kinase TA14390 chr2.cand.362 -choline/ethanolamine kinase TA14385 chr2.cand.361 - choline/ethanolamine kinase TA14380 chr2.cand.360 - choline/ethanolamine kinase TA14375 chr2.cand.359 - choline/ethanolamine kinase TA14370 chr2.cand.358 - transmembrane domains; membrane protein, putative; 2 probable transmembrane helices predicted for TA14370 by TMHMM2.0 at aa 55-74 and 155-177 TA14360 chr2.C.cand.162 - PF00561 alpha/beta hydrolase fold TA14350 all_bases.C.cand.447 - hypothetical protein TA14345 DnaJ domain protein; chr2.cand.355 - PF00226 DnaJ domain TA14340 chr2.cand.354 - hypothetical protein; 1 probable transmembrane helix predicted for TA14340 by TMHMM2.0 at aa 272-294 TA14335 all_bases.C.cand.445 - hypothetical protein TA14330 chr2.cand.352 - hypothetical protein, conserved, mal13p1.237 TA14325 chr2.cand.351 - hypothetical protein; 1 probable transmembrane helix predicted for TA14325 by TMHMM2.0 at aa 47-66; Signal anchor predicted for TA14325 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.983) with cleavage site probability 0.000 between residues -1 and 0 TA14320 chr2.C.cand.165 - PF00928 Adaptor complexes medium subunit family TA14310 hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14310 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.860 between residues 22 and 23; GPI-Anchor Signal predicted for TA14310 by DGPI v2.04 with cleavage site probability 0.15480001 near 137 TA14305 chr2.cand.350 - ubiquitin-conjugating enzyme e2 TA14300 chr2.cand.350 - gdp-mannose pyrophosphorylase TA14295 chr2.C.cand.166 - DnaJ domain; DnaJ domain protein, putative; 1 probable transmembrane helix predicted for TA14295 by TMHMM2.0 at aa 33-55; Signal anchor predicted for TA14295 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.995) with cleavage site probability 0.003 between residues 56 and 57 TA14285 chr2.cand.349 - signal peptide, hypothetical protein; secreted protein, putative TA14280 chr2.cand.348 - splicing factor 3a subunit 2, putative TA14275 chr2.cand.346 - sodium/hydrogen exchanger; 11 probable transmembrane helices predicted for TA14275 by TMHMM2.0 at aa 2-24, 39-61, 68-86, 137-159, 171-193, 245-267, 293-315, 330-352, 365-382, 402-421 and 434-456; Signal peptide predicted for TA14275 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.002) with cleavage site probability 0.689 between residues 26 and 27 TA14270 chr2.C.cand.167 - signal peptide, 50s ribosomal protein l22, no predicted apicoplast target sequence; Signal peptide predicted for TA14270 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.872 between residues 15 and 16 TA14265 chr2.cand.345 - hypothetical protein; GPI-Anchor Signal predicted for TA14265 by DGPI v2.04, no cleavage site predicted TA14260 all_bases.C.cand.439 - mis3 homologue, ribosomal RNA assembly protein TA14255 chr2.cand.343 - protein kinase TA14250 small overlap at the 3' end with gene TA14245; 1 probable transmembrane helix predicted for TA14250 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA14250 by SignalP 2.0 HMM (Signal peptide probability 0.670, signal anchor probability 0.191) with cleavage site probability 0.440 between residues 22 and 23 TA14245 small overlap at the 3' end with gene TA14250 TA14240 all_bases.cand.1381 - leu/phe-trna protein transferase TA14230 chr2.C.cand.170 - hypothetical protein, conserved, pfb0590W, signal peptide TA14225 DnaJ protein, putative; chr2.C.cand.171 - DnaJ protein TA14220 all_bases.C.cand.436 - hypothetical protein; 2 probable transmembrane helices predicted for TA14220 by TMHMM2.0 at aa 62-84 and 149-168 TA14215 chr2.C.cand.172 - hypothetical protein, signal peptide, TSP1 Thrombospondin type 1 repeat, SMART SM0209, transmembrane; membrane protein; 1 probable transmembrane helix predicted for TA14215 by TMHMM2.0 at aa 1318-1340; Signal peptide predicted for TA14215 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.001) with cleavage site probability 0.426 between residues 16 and 17 TA14210 chr2.C.cand.173 - hypothetical protein, transmembrane; membrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 4 probable transmembrane helices predicted for TA14210 by TMHMM2.0 at aa 82-101, 121-140, 147-169 and 193-215; Signal peptide predicted for TA14210 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 17 and 18 TA14205 all_bases.cand.1385 - signal sequence; secreted protein, putative; Signal peptide predicted for TA14205 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.939 between residues 19 and 20 TA14200 chr2.cand.341 - signal peptide, PF00090 Thrombospondin type 1 domain; secreted protein, putative; 1 probable transmembrane helix predicted for TA14200 by TMHMM2.0 at aa 646-665; Signal peptide predicted for TA14200 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.439 between residues 15 and 16 TA14195 all_bases.C.cand.434 - ring finger TA14190 chr2.C.cand.175 - score = 7.98 TA14185 chr2.C.cand.176 - ATP-dependent RNA helicase TA14155 histone h2a variant TA14150 chr2.C.cand.178 - you2-like c2c2 zinc finger protein TA14140 transmembrane protein, signal peptide; secreted protein, putative TA14135 transmembrane protein, signal peptide; secreted protein, putative; 2 probable transmembrane helices predicted for TA14135 by TMHMM2.0 at aa 4-26 and 83-105; Signal peptide predicted for TA14135 by SignalP 2.0 HMM (Signal peptide probability 0.861, signal anchor probability 0.032) with cleavage site probability 0.535 between residues 23 and 24 TA14130 transmembrane protein, signal peptide; secreted protein, putative; 1 probable transmembrane helix predicted for TA14130 by TMHMM2.0 at aa 622-644 TA14120 chr2.cand.337 - hypothetical protein, similarity to T. parva fragment TA14115 chr2.cand.336 - 14-3-3 protein-like TA14110 chr2.C.cand.181 - hypothetical protein, histone-like TA14105 mitochondrial carrier protein TA14100 chr2.cand.334 - hypothetical protein TA14095 all_bases.cand.1391 - GTPase of unknown function; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA14095 by SignalP 2.0 HMM (Signal peptide probability 0.944, signal anchor probability 0.000) with cleavage site probability 0.365 between residues 17 and 18 TA14090 chr2.cand.333 - thioredoxin, signal sequence, transmembrane; 1 probable transmembrane helix predicted for TA14090 by TMHMM2.0 at aa 111-133 TA14085 chr2.cand.333 - thioredoxin, signal sequence, transmembrane; 1 probable transmembrane helix predicted for TA14085 by TMHMM2.0 at aa 46-68; Signal peptide predicted for TA14085 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.000) with cleavage site probability 0.316 between residues 16 and 17 TA14080 chr2.cand.332 - hypothetical protein TA14060 chr2.C.cand.184 - hypothetical protein TA14055 chr2.C.cand.186 - PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase TA14050 chr2.C.cand.187 - ubiquitin-like protein nedd8 homologue TA14040 chr2.C.cand.189 - hypothetical protein TA14035 chr2.cand.330 - hypothetical protein TA14030 chr2.C.cand.191 - possible signal anchor, transmembrane protein; 11 probable transmembrane helices predicted for TA14030 by TMHMM2.0 at aa 12-34, 39-61, 68-87, 91-113, 126-148, 158-180, 234-256, 276-298, 305-322, 337-359 and 799-821; Signal anchor predicted for TA14030 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.954) with cleavage site probability 0.001 between residues 25 and 26 TA14025 chr2.C.cand.192 - signal peptide, transmembrane protein; 13 probable transmembrane helices predicted for TA14025 by TMHMM2.0 at aa 20-42, 57-74, 79-98, 103-121, 128-147, 151-173, 185-204, 224-243, 318-337, 385-407, 414-436, 859-881 and 985-1007 TA14020 chr2.C.cand.193 - TLDc domain in TBC and LysM domain containing proteins TA14010 all_bases.C.cand.423 - hypothetical protein TA14005 chr2.C.cand.196 - hypothetical protein TA14000 all_bases.C.cand.422 - hypothetical protein, conserved, pfi0770C TA13995 all_bases.C.cand.421 - casein kinase ii beta chain TA13990 chr2.C.cand.197 - hypothetical protein TA13980 chr2.cand.322 - hypothetical protein; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13980 by SignalP 2.0 HMM (Signal peptide probability 0.712, signal anchor probability 0.009) with cleavage site probability 0.269 between residues 19 and 20 TA13970 chr2.cand.321 - hypothetical protein; Signal peptide predicted for TA13970 by SignalP 2.0 HMM (Signal peptide probability 0.608, signal anchor probability 0.000) with cleavage site probability 0.359 between residues 24 and 25 TA13965 chr2.cand.320 - hypothetical protein TA13945 chr2.C.cand.201 - guanylate kinase TA13940 chr2.C.cand.202 - membrane protein, putative; 5 probable transmembrane helices predicted for TA13940 by TMHMM2.0 at aa 81-103, 143-165, 559-581, 641-663 and 705-727 TA13935 chr2.cand.314 - hypothetical protein, signal peptide, apicoplast targetting sequence; hypothetical apicoplast protein TA13930 1 probable transmembrane helix predicted for TA13930 by TMHMM2.0 at aa 19-41; Signal anchor predicted for TA13930 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.979) with cleavage site probability 0.000 between residues 40 and 41 TA13925 chr2.C.cand.203 - score = 10.91 TA13920 GPI-Anchor Signal predicted for TA13920 by DGPI v2.04, no cleavage site predicted TA13915 chr2.cand.313 - hypothetical protein TA13910 chr2.C.cand.205 - PF00573 60S Ribosomal protein L4/L1 family TA13905 hypothetical protein; 8 probable transmembrane helices predicted for TA13905 by TMHMM2.0 at aa 93-115, 248-270, 282-304, 319-341, 348-370, 400-422, 474-496 and 506-525 TA13895 chr2.C.cand.208 - PF01168 Alanine racemase, N-terminal domain UPF0001, possible proline synthetase associated protein TA13890 chr2.cand.311 - hypothetical protein; 1 probable transmembrane helix predicted for TA13890 by TMHMM2.0 at aa 993-1015 TA13885 chr2.C.cand.211 - hypothetical protein, signal peptide; secreted protein, putative; Signal peptide predicted for TA13885 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 17 and 18 TA13880 hypothetical protein, conserved, pfe0380C TA13875 membrane protein, Rhomboid family; chr2.cand.307 - PF01694 Rhomboid family - membrane protein, protease; 7 probable transmembrane helices predicted for TA13875 by TMHMM2.0 at aa 267-289, 391-413, 423-445, 452-471, 481-498, 503-520 and 600-622 TA13870 chr2.cand.306 - hypothetical protein, conserved, pfi1455C TA13865 chr2.cand.305 - PF00227 proteasome A-type and B-type TA13860 chr2.C.cand.212 - Rab family small GTPase, signal peptide TA13855 nucleolar protein, PF01189 NOL1/NOP2/sun family TA13850 chr2.cand.303 - hypothetical protein, conserved, pfi1565W, PF00235 profilin TA13845 hypothetical protein, conserved, pfi1560C, signal peptide, transmembrane/DUF21 domain; 3 probable transmembrane helices predicted for TA13845 by TMHMM2.0 at aa 20-42, 84-103 and 110-132; Signal anchor predicted for TA13845 by SignalP 2.0 HMM (Signal peptide probability 0.089, signal anchor probability 0.836) with cleavage site probability 0.043 between residues 41 and 42 TA13840 hypothetical protein; 1 probable transmembrane helix predicted for TA13840 by TMHMM2.0 at aa 126-148 TA13835 chr2.C.cand.215 - sulfate transporter; 10 probable transmembrane helices predicted for TA13835 by TMHMM2.0 at aa 169-191, 198-220, 235-257, 264-286, 301-323, 330-352, 398-420, 432-454, 469-491 and 539-571 TA13830 chr2.C.cand.217 - hypothetical protein TA13825 chr2.C.cand.218 - signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA13825 by TMHMM2.0 at aa 187-209; Signal peptide predicted for TA13825 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.719 between residues 16 and 17; GPI-Anchor Signal predicted for TA13825 by DGPI v2.04, no cleavage site predicted TA13820 chr2.C.cand.219 - hypothetical protein, signal peptide, transmembrane, low similarity to ts-chitose type 23 kDa piroplasm surface protein; 1 probable transmembrane helix predicted for TA13820 by TMHMM2.0 at aa 176-198; GPI-Anchor Signal predicted for TA13820 by DGPI v2.04 with cleavage site probability 0.24939999 near 174 TA13815 chr2.C.cand.220 - hypothetical protein, signal peptide transmembrane, low similarity to ts-chitose type 23 kDa piroplasm surface protein; 2 probable transmembrane helices predicted for TA13815 by TMHMM2.0 at aa 4-21 and 195-212; Signal peptide predicted for TA13815 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.012) with cleavage site probability 0.664 between residues 16 and 17; GPI-Anchor Signal predicted for TA13815 by DGPI v2.04, no cleavage site predicted TA13810 chr2.C.cand.221 - ts-chitose type 23 kDa piroplasm surface protein, signal peptide, transmembrane; 1 probable transmembrane helix predicted for TA13810 by TMHMM2.0 at aa 204-226; Signal peptide predicted for TA13810 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.401 between residues 24 and 25; GPI-Anchor Signal predicted for TA13810 by DGPI v2.04, no cleavage site predicted TA13805 PF01798 Putative snoRNA binding domain TA13800 chr2.C.cand.223 - hypothetical protein TA13790 PF00149 Calcineurin-like phosphoesterase TA13785 2 probable transmembrane helices predicted for TA13785 by TMHMM2.0 at aa 29-51 and 82-104; Signal anchor predicted for TA13785 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.660) with cleavage site probability 0.000 between residues 47 and 48 TA13780 chr2.cand.299 - hypothetical protein, conserved, pfi1425W, some similarity to tif TA13775 GPI-Anchor Signal predicted for TA13775 by DGPI v2.04 with cleavage site probability 0.3306 near 47 TA13770 all_bases.cand.1420 - small GTPase TA13765 chr2.cand.298 - score = 10.43; chr2.cand.298 - NADH-cytochrome b5 reductase, putative, Oxidoreductase NAD-binding domain TA13760 chr2.cand.297 - u1 small nuclear ribonucleoprotein 70 kDa TA13755 chr2.C.cand.225 - hypothetical protein, signal peptide, transmembrane; membrane protein, putative; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA13755 by TMHMM2.0 at aa 176-198, 285-302 and 322-344; Signal peptide predicted for TA13755 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.694 between residues 18 and 19 TA13750 isoleucyl-trna synthetase, putative, PF00133 tRNA synthetases class I (I, L, M and V); Signal peptide predicted for TA13750 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.000) with cleavage site probability 0.532 between residues 15 and 16 TA13745 chr2.cand.294 - hypothetical protein TA13730 chr2.C.cand.226 - hypothetical protein, conserved, pfl1195W TA13725 RNA binding protein, possible branch site protein TA13720 chr2.C.cand.227 - hypothetical protein; 1 probable transmembrane helix predicted for TA13720 by TMHMM2.0 at aa 1524-1541; Signal peptide predicted for TA13720 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.683 between residues 19 and 20; GPI-Anchor Signal predicted for TA13720 by DGPI v2.04 with cleavage site probability 0.516 near 1520 TA13715 chr2.cand.293 - 5'-3' exonuclease TA13710 chr2.C.cand.228 - hypothetical protein, conserved, pfb0177C TA13705 chr2.cand.292 - hypothetical protein TA13700 chr2.cand.291 - hypothetical protein TA13695 chr2.C.cand.229 - hypothetical protein TA13690 chr2.C.cand.230 - hypothetical protein TA13685 1 probable transmembrane helix predicted for TA13685 by TMHMM2.0 at aa 273-295 TA13680 chr2.C.cand.232 - DNA replication licensing factor TA13675 all_bases.C.cand.392 - hypothetical protein TA13665 chr2.C.cand.233 - hypothetical protein; 4 probable transmembrane helices predicted for TA13665 by TMHMM2.0 at aa 23-40, 47-69, 74-91 and 104-123 TA13660 all_bases.C.cand.390 - N2,N2-dimethylguanosine tRNA methyltransferase TA13655 chr2.C.cand.234 - calcium-transporting ATPase; 8 probable transmembrane helices predicted for TA13655 by TMHMM2.0 at aa 69-88, 98-117, 216-238, 271-288, 309-331, 1049-1071, 1156-1178 and 1193-1210 TA13650 chr2.C.cand.235 - hypothetical protein TA13645 chr2.cand.285 - hypothetical protein, conserved, mal8p1.134, contains 5 x SMART SM0239 C2 Protein kinase C conserved region 2 (CalB), transmembrane domain; 1 probable transmembrane helix predicted for TA13645 by TMHMM2.0 at aa 1395-1414 TA13640 chr2.C.cand.236 - hypothetical protein, possible cdk-activating kinase assembly factor TA13635 chr2.C.cand.236 - hypothetical protein TA13625 chr2.C.cand.237 - hypothetical protein TA13620 chr2.C.cand.237 - hypothetical protein TA13615 chr2.C.cand.237 - hypothetical protein TA13610 all_bases.cand.1431 - ATP dependent RNA helicase TA13605 chr2.C.cand.239 - hypothetical protein, conserved, DUF 259 TA13600 chr2.cand.283 - DnaJ domain protein; DnaJ domain protein TA13595 chr2.C.cand.240 - hypothetical protein TA13590 chr2.C.cand.241 - hypothetical protein; 4 probable transmembrane helices predicted for TA13590 by TMHMM2.0 at aa 7-29, 1170-1189, 1196-1213 and 1264-1283; Signal peptide predicted for TA13590 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.012) with cleavage site probability 0.378 between residues 24 and 25 TA13585 chr2.cand.282 - SKIP/SNW domain TA13580 chr2.C.cand.242 - ring/PHD finger; ring finger protein, putative TA13565 chr2.C.cand.243 - helicase TA13560 chr2.cand.281 - putative centromere/microtubule binding protein, belongs to the trub family of pseudouridine synthases, contains PF01509 TruB family pseudouridylate synthase (N terminal domain), PF01472 PUA domain TA13555 chr2.C.cand.244 - hypothetical protein TA13550 all_bases.cand.1438 - peptidase C54 domain TA13545 chr2.C.cand.246 - hypothetical protein TA13540 chr2.cand.277 - hypothetical protein, contains 2 potential PF00027 cyclic nucleotide binding domains TA13535 all_bases.C.cand.378 - hypothetical protein TA13530 chr2.C.cand.251 - phosphate transporter, signal peptide; 9 probable transmembrane helices predicted for TA13530 by TMHMM2.0 at aa 7-26, 46-68, 89-111, 145-167, 180-202, 230-252, 485-502, 531-553 and 715-737; Signal peptide predicted for TA13530 by SignalP 2.0 HMM (Signal peptide probability 0.634, signal anchor probability 0.363) with cleavage site probability 0.220 between residues 23 and 24 TA13525 chr2.cand.274 - hypothetical protein TA13520 chr2.C.cand.252 - ATP-dependent RNA helicase TA13515 chr2.cand.273 - hypothetical protein, conserved, pfl1085W TA13510 chr2.C.cand.253 - hypothetical protein, conserved, pfl1090W TA13505 all_bases.C.cand.374 - hypothetical protein; 1 probable transmembrane helix predicted for TA13505 by TMHMM2.0 at aa 21-43; Signal anchor predicted for TA13505 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.890) with cleavage site probability 0.001 between residues 36 and 37 TA13500 all_bases.cand.1445 - camp-dependent protein kinase regulatory subunit, 2 x cyclic nucleotide binding domains TA13495 chr2.cand.271 - signal peptide, transmembrane; 5 probable transmembrane helices predicted for TA13495 by TMHMM2.0 at aa 13-35, 45-67, 148-165, 175-197 and 214-231; Signal anchor predicted for TA13495 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.977) with cleavage site probability 0.003 between residues 22 and 23 TA13490 chr2.C.cand.255 - hypothetical protein TA13485 chr2.cand.270 - hypothetical protein TA13480 chr2.cand.269 - DNAJ-like sec63 homologue; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA13480 by TMHMM2.0 at aa 23-45, 103-125 and 225-247; Signal anchor predicted for TA13480 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.891) with cleavage site probability 0.000 between residues 44 and 45 TA13475 chr2.cand.268 - hypothetical protein TA13470 chr2.cand.267 - vacuolar ATP synthase subunit d TA13460 chr2.cand.266 - 40s ribosomal subunit protein s6 TA13455 One 3-prime exon possible TA13450 chr2.C.cand.256 - hypothetical protein TA13445 chr2.cand.264 - hypothetical protein TA13440 chr2.C.cand.257 - hypothetical protein TA13435 chr2.cand.263 - score = 6.31; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA13435 by TMHMM2.0 at aa 31-53; Signal anchor predicted for TA13435 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.964) with cleavage site probability 0.000 between residues 46 and 47 TA13430 chr2.cand.262 - transmembrane; 10 probable transmembrane helices predicted for TA13430 by TMHMM2.0 at aa 20-42, 100-122, 134-156, 166-188, 201-223, 252-274, 287-309, 359-381, 401-423 and 433-455 TA13425 hypothetical protein, conserved Theileria family, signal peptide; Signal peptide predicted for TA13425 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.003) with cleavage site probability 0.675 between residues 19 and 20 TA13420 chr2.cand.260 - hypothetical transmembrane protein; transmembrane protein, putative; 9 probable transmembrane helices predicted for TA13420 by TMHMM2.0 at aa 109-131, 317-339, 980-999, 1052-1074, 1084-1101, 1129-1151, 1191-1213, 1225-1247 and 1267-1289 TA13415 chr2.C.cand.260 - hypothetical protein, conserved, pf13_0296 TA13400 chr2.cand.259 - hypothetical protein, signal peptide TA13395 chr2.C.cand.261 - hypothetical protein, conserved, pf11_0163 TA13390 all_bases.cand.1453 - hypothetical protein TA13385 chr2.cand.258 - conserved hypothetical transmembrane protein; 11 probable transmembrane helices predicted for TA13385 by TMHMM2.0 at aa 21-43, 58-80, 87-109, 119-141, 148-170, 174-191, 211-233, 248-267, 280-302, 317-339 and 352-374 TA13375 chr2.cand.256 - PF00781 Diacylglycerol kinase catalytic domain (presumed), PF00609 Diacylglycerol kinase accessory domain (presumed) TA13370 chr2.cand.255 - hypothetical protein, conserved, pf14_0682, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA13370 by TMHMM2.0 at aa 7-24; Signal peptide predicted for TA13370 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.374) with cleavage site probability 0.415 between residues 29 and 30 TA13365 chr2.C.cand.262 - hypothetical protein TA13360 chr2.C.cand.263 - hypothetical protein, signal peptide; Signal peptide predicted for TA13360 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.701 between residues 17 and 18 TA13355 chr2.C.cand.264 - conserved hypothetical protein, jmjC domain, PF02246 Protein L b1 domain TA13345 chr2.cand.254 - hypothetical protein TA13340 chr2.cand.253 - DNA polymerase delta small subunit TA13335 chr2.cand.253 - hypothetical protein; 1 probable transmembrane helix predicted for TA13335 by TMHMM2.0 at aa 130-152 TA13330 chr2.C.cand.265 - hypothetical protein TA13325 chr2.C.cand.266 - DNA topoisomerase ii TA13320 all_bases.cand.1459 - fork-head domain protein TA13315 chr2.C.cand.269 - beta tubulin TA13310 all_bases.C.cand.356 - cell differentiation protein TA13305 chr2.cand.249 - protein kinase TA13300 chr2.C.cand.270 - score = 17.25 TA13295 chr2.C.cand.271 - hypothetical protein, conserved, mal4p2.40 TA13290 all_bases.cand.1462 - ABC transporter; 5 probable transmembrane helices predicted for TA13290 by TMHMM2.0 at aa 136-158, 178-200, 265-287, 291-313 and 377-399 TA13285 all_bases.C.cand.353 - hypothetical protein, pf13_0274, DUF254 motif TA13280 chr2.C.cand.273 - hypothetical protein, exonuclease domain TA13275 all_bases.C.cand.352 - hypothetical membrane protein; membrane protein, putative; 12 probable transmembrane helices predicted for TA13275 by TMHMM2.0 at aa 65-87, 102-124, 136-153, 158-180, 210-232, 242-264, 316-338, 353-375, 395-414, 424-446, 467-489 and 499-521 TA13270 all_bases.C.cand.351 - hypothetical protein, conserved, pfb0501C TA13265 all_bases.cand.1465 - GTP-binding protein, GTP1_OBJ domain TA13260 chr2.cand.243 - mitochondrial carrier protein; 4 probable transmembrane helices predicted for TA13260 by TMHMM2.0 at aa 20-37, 120-142, 214-236 and 272-294 TA13255 chr2.cand.242 - hypothetical protein TA13250 all_bases.C.cand.348 - hypothetical protein, conserved pf13_0018, SM0667, LisH Lissencephaly type-1-like homology motif, WD40 domains TA13240 chr2.cand.240 - hypothetical protein TA13235 chr2.cand.239 - hypothetical protein TA13230 all_bases.C.cand.345 - hypothetical protein, conserved pf13_0018, SM0667, LisH Lissencephaly type-1-like homology motif, WD40 domains TA13225 chr2.C.cand.275 - hypothetical protein TA13220 all_bases.cand.1468 - hypothetical protein TA13215 all_bases.cand.1469 - conserved hypothetical protein, pfe1415W, transmembrane, zinc finger; 4 probable transmembrane helices predicted for TA13215 by TMHMM2.0 at aa 71-93, 113-135, 216-238 and 253-275 TA13210 vacuolar ATP synthase subunit f TA13205 chr2.cand.236 - hypothetical protein, conserved, pfl1080C, PF01902 Domain of unknown function DUF71 TA13200 all_bases.C.cand.342 - replication factor a-related protein TA13175 chr2.C.cand.281 - nucleoside phosphorylase TA13170 chr2.cand.233 - nucleoside phosphorylase TA13165 chr2.C.cand.282 - nucleoside phosphorylase, PF01048 Phosphorylase family TA13160 chr2.C.cand.283 - hypothetical protein, conserved, pf10_01831 TA13155 chr2.C.cand.284 - PF00587 tRNA synthetase class II core domain (G, H, P, S and T) TA13145 chr2.cand.232 - hypothetical protein, conserved, PF00899 ThiF family TA13140 chr2.cand.231 - hypothetical protein TA13135 all_bases.C.cand.338 - DEAD box helicase TA13125 chr2.C.cand.285 - ATP-dependent peptidase, PF00004 ATPase family associated with various cellular activities (AAA), PF01434 peptidase family M41 TA13120 all_bases.cand.1476 - hypothetical protein, conserved, pf08_0079, PF01253 translation initiation factor SUI1 TA13115 chr2.cand.229 - hypothetical protein TA13110 chr2.C.cand.287 - hypothetical protein TA13105 chr2.cand.228 - hypothetical protein TA13100 all_bases.cand.1479 - signal recognition particle receptor alpha subunit TA13095 chr2.cand.227 - nucleoside diphosphate kinase TA13080 chr2.cand.226 - hypothetical protein, transmembrane domains; 2 probable transmembrane helices predicted for TA13080 by TMHMM2.0 at aa 124-146 and 153-175 TA13075 chr2.cand.225 - hypothetical membrane protein, signal peptide, transmembrane domains; membrane protein, putative; 4 probable transmembrane helices predicted for TA13075 by TMHMM2.0 at aa 21-43, 58-80, 85-107 and 134-156; Signal anchor predicted for TA13075 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.998) with cleavage site probability 0.001 between residues 46 and 47 TA13070 chr2.C.cand.293 - clathrin coat assembly protein PF01217 clathrin adaptor complex small chain TA13065 chr2.cand.224 - hypothetical membrane protein; hypothetical membrane protein; 4 probable transmembrane helices predicted for TA13065 by TMHMM2.0 at aa 25-47, 60-79, 83-101 and 121-143 TA13060 chr2.cand.223 - hypothetical protein TA13055 chr2.cand.222 - hypothetical protein, conserved, pf11_0433, TPR domain, DnaJ domain TA13050 chr2.C.cand.296 - hypothetical protein, conserved TA13045 chr2.C.cand.297 - signal peptide, some similarity to carbonic anhydrase; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13045 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.417 between residues 22 and 23; GPI-Anchor Signal predicted for TA13045 by DGPI v2.04, no cleavage site predicted TA13040 chr2.cand.221 - hypothetical protein TA13035 chr2.C.cand.298 - pre-mrna splicing factor, WD40 domains TA13030 chr2.C.cand.299 - hypothetical protein TA13020 chr2.C.cand.300 - hypothetical protein TA13015 chr2.cand.220 - hypothetical protein TA13010 chr2.cand.219 - PF00612 IQ calmodulin-binding motif TA13005 chr2.cand.219 - PF00612 IQ calmodulin-binding motif TA13000 chr2.C.cand.301 - hypothetical protein, conserved, pf13_0190, three TPR domains TA12995 chr2.C.cand.302 - DNA binding protein, PF00249 Myb-like DNA-binding domain TA12990 chr2.cand.217 - hypothetical protein TA12985 all_bases.C.cand.326 - hypothetical protein TA12980 chr2.cand.215 - PF00169 PH domain pleckstrin homology PF01237 oxysterol-binding protein TA12975 chr2.cand.214 - hypothetical protein TA12965 all_bases.cand.1488 - calcium-dependent protein kinase TA12960 chr2.cand.212 - hypothetical protein, PF00627 UBA/TS-N domain; ubiquitin-related protein, putative TA12955 hypothetical protein, transmembrane; 3 probable transmembrane helices predicted for TA12955 by TMHMM2.0 at aa 7-29, 329-351 and 384-406 TA12950 all_bases.cand.1489 - cytochrome c TA12945 all_bases.cand.1490 - hypothetical protein, conserved, pf14_0034, signal peptide, TLC TRAM, LAG1 and CLN8 homology domains.; 5 probable transmembrane helices predicted for TA12945 by TMHMM2.0 at aa 25-42, 142-164, 184-206, 226-248 and 269-291 TA12940 all_bases.C.cand.321 - hypothetical protein TA12935 all_bases.C.cand.321 - translocation protein sec62, putative; 2 probable transmembrane helices predicted for TA12935 by TMHMM2.0 at aa 177-199 and 224-246 TA12930 all_bases.cand.1491 - ribosomal protein l20 TA12925 12 probable transmembrane helices predicted for TA12925 by TMHMM2.0 at aa 154-176, 189-207, 212-234, 296-318, 333-355, 407-429, 449-471, 856-878, 923-945, 1016-1038, 1108-1130 and 1137-1159 TA12920 chr2.cand.206 - ABC transporter; 11 probable transmembrane helices predicted for TA12920 by TMHMM2.0 at aa 139-161, 176-198, 283-305, 320-342, 394-416, 436-458, 837-859, 902-924, 972-994, 999-1021 and 1084-1106 TA12905 all_bases.cand.1492 - splicing factor 3 subunit 1, PF01805 Surp module (SWAP domain) TA12900 chr2.cand.205 - score = 60.15; 12 probable transmembrane helices predicted for TA12900 by TMHMM2.0 at aa 152-174, 181-200, 210-232, 294-316, 331-353, 405-427, 447-469, 847-869, 910-932, 982-1004, 1009-1031 and 1092-1114 TA12895 all_bases.C.cand.316 - hypothetical protein TA12890 chr2.C.cand.308 - hypothetical protein TA12885 chr2.cand.202 - WD40 repeat protein TA12880 chr2.cand.201 - hypothetical protein, conserved, pf14_0717 TA12875 chr2.C.cand.309 - hypothetical protein TA12870 all_bases.cand.1494 - PF01509 TruB family pseudouridylate synthase (N terminal domain) TA12865 chr2.cand.200 - 2 x EF hand domains and protein phosphatase-2A (PP2A) domains TA12860 all_bases.C.cand.312 - camp-dependent protein kinase catalytic subunit TA12855 all_bases.C.cand.311 - small nuclear ribonucleoprotein, PF00076 RNA recognition motif TA12850 conserved hypothetical protein; 2 probable transmembrane helices predicted for TA12850 by TMHMM2.0 at aa 10-32 and 53-71; Signal peptide predicted for TA12850 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.019) with cleavage site probability 0.363 between residues 21 and 22; GPI-Anchor Signal predicted for TA12850 by DGPI v2.04, no cleavage site predicted TA12845 all_bases.cand.1495 - eukaryotic translation initiation factor 3, subunit 6, putative TA12840 all_bases.cand.1496 - hypothetical protein TA12835 all_bases.cand.1496 - splicing factor 3b subunit 4 TA12830 all_bases.C.cand.310 - uracil-DNA glycosylase, putative TA12825 all_bases.cand.1497 - hypothetical protein, conserved, pf14_0193 TA12820 chr2.cand.196 - hypothetical protein, conserved, pfe1395C TA12815 chr2.C.cand.315 - 60S acidic ribosomal protein P2 TA12810 all_bases.cand.1499 - hypothetical protein, conserved TA12800 chr2.cand.195 - PF00782 Dual specificity phosphatase, catalytic domain TA12795 all_bases.cand.1501 - score = 54.80 TA12790 50s ribosomal protein l9, signal peptide, apicoplast target sequence; 1 probable transmembrane helix predicted for TA12790 by TMHMM2.0 at aa 12-34 TA12780 chr2.cand.194 - splicing factor PWI domain TA12775 chr2.C.cand.319 - rat brain protein-like TA12770 chr2.C.cand.320 - hypothetical protein TA12765 chr2.cand.192 - PF01866 putative diphthamide synthesis protein TA12760 chr2.C.cand.321 - hypothetical protein TA12755 all_bases.cand.1505 - small nuclear ribonucleoprotein associated protein b TA12745 all_bases.C.cand.305 - lon protease homolog 2 TA12740 all_bases.C.cand.304 - almost identical to Spm1 TA12735 all_bases.cand.1507 - RNA polymerase 16kd subunit TA12730 all_bases.C.cand.303 - hypothetical protein TA12725 all_bases.cand.1508 - hypothetical protein TA12720 signal peptide, apicoplast target sequence, DnaJ domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA12720 by TMHMM2.0 at aa 4-21; Signal peptide predicted for TA12720 by SignalP 2.0 HMM (Signal peptide probability 0.917, signal anchor probability 0.000) with cleavage site probability 0.845 between residues 16 and 17 TA12715 all_bases.cand.1510 - peptide release factor erf1, pfam erf1-3 TA12710 PF02230 Phospholipase/Carboxylesterase TA12705 all_bases.C.cand.301 - signal peptide, Pfam thioredoxin; 1 probable transmembrane helix predicted for TA12705 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA12705 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.006) with cleavage site probability 0.950 between residues 25 and 26 TA12700 all_bases.C.cand.300 - PF01331 mRNA capping enzyme, catalytic domain TA12685 all_bases.cand.1512 - PF03109 ABC1 family TA12680 chr2.cand.185 - serine/threonine protein phosphatase pp1-gamma catalytic subunit TA12675 chr2.cand.184 - Ring finger protein, PF00097 Zinc finger, C3HC4 type, PF00098 Zinc knuckle TA12670 chr2.cand.183 - hypothetical protein TA12665 chr2.C.cand.327 - signal, PF00380 Ribosomal protein S9/S16; 1 probable transmembrane helix predicted for TA12665 by TMHMM2.0 at aa 12-34; Signal peptide predicted for TA12665 by SignalP 2.0 HMM (Signal peptide probability 0.749, signal anchor probability 0.182) with cleavage site probability 0.582 between residues 28 and 29 TA12660 chr2.C.cand.328 - hypothetical protein TA12655 chr2.C.cand.329 - hypothetical protein TA12650 hypothetical protein, conserved, mal13p1.282 TA12645 chr2.C.cand.330 - ubiquitin carboxy terminal hydrolase TA12640 chr2.C.cand.331 - Arm-1 protein TA12630 all_bases.C.cand.296 - signal peptide, apicoplast target sequence, DnaJ domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 5 probable transmembrane helices predicted for TA12630 by TMHMM2.0 at aa 30-47, 137-159, 163-185, 197-219 and 333-350; Signal anchor predicted for TA12630 by SignalP 2.0 HMM (Signal peptide probability 0.014, signal anchor probability 0.973) with cleavage site probability 0.005 between residues 17 and 18 TA12625 chr2.C.cand.332 - hypothetical protein, possible transmembrane; 2 probable transmembrane helices predicted for TA12625 by TMHMM2.0 at aa 28-50 and 78-100 TA12620 all_bases.C.cand.295 - PF03054 tRNA methyl transferase, signal peptide, apicoplast target sequence; 1 probable transmembrane helix predicted for TA12620 by TMHMM2.0 at aa 5-27 TA12615 chr2.cand.180 TA12610 chr2.C.cand.333 - WD40 protein TA12605 all_bases.C.cand.293 - hypothetical protein TA12600 all_bases.cand.1520 - hypothetical protein, some conservation TA12595 all_bases.C.cand.292 - hypothetical protein, conserved, pf10_0204 TA12590 all_bases.C.cand.291 - apurinic/apyrimidinic endonuclease Apn1; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12590 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.027) with cleavage site probability 0.654 between residues 21 and 22 TA12585 all_bases.C.cand.291 - translation initiation factor 6 TA12575 chr2.C.cand.335 - DEAD box RNA helicase TA12570 all_bases.cand.1521 - Ubiquitin-activating enzyme (E1 enzyme), PF00899 ThiF family, PF02134 Repeat in ubiquitin-activating (UBA) protein TA12565 chr2.cand.174 - cargo receptor, signal peptide, PF01105 emp24/gp25L/p24 family; 1 probable transmembrane helix predicted for TA12565 by TMHMM2.0 at aa 181-203 TA12560 chr2.C.cand.337 - hypothetical protein TA12555 chr2.C.cand.338 - hypothetical protein, bromodomain TA12550 all_bases.C.cand.289 - hypothetical protein, conserved, pf14_0723, signal peptide TA12545 chr2.cand.169 - partially conserved hypothetical protein TA12540 chr2.C.cand.339 - syntaxin family, Syntaxin motif; 1 probable transmembrane helix predicted for TA12540 by TMHMM2.0 at aa 264-283 TA12535 chr2.cand.168 - 60S ribosomal protein l23 TA12530 possible signal peptide present; all_bases.cand.1525 - PF00749 tRNA synthetases class I (E and Q), catalytic domain; 2 probable transmembrane helices predicted for TA12530 by TMHMM2.0 at aa 588-610 and 630-652 TA12520 chr2.cand.167 - hypothetical protein TA12515 S/T protein kinase TA12510 chr2.C.cand.342 - thymidylate kinase TA12505 chr2.C.cand.343 - hypothetical protein, some similarity to S. pombe nucleoporin TA12500 chr2.cand.161 - 60S ribosomal protein l27a TA12495 2 probable transmembrane helices predicted for TA12495 by TMHMM2.0 TA12490 chr2.C.cand.344 - hypothetical protein TA12485 all_bases.C.cand.282 - hypothetical protein, possible signal peptide TA12480 chr2.C.cand.345 - hypothetical protein, partly conserved TA12475 chr2.C.cand.346 - conserved hypothetical protein, some similarity to human mbp-1 interacting protein-2a TA12470 chr2.cand.156 - PF01909 Nucleotidyltransferase domain TA12465 chr2.cand.156 - chaperonin, 2 x cpn10, signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12465 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.000) with cleavage site probability 0.843 between residues 16 and 17 TA12460 chr2.C.cand.347 - isoleucyl-trna synthetase TA12455 chr2.cand.155 - hypothetical protein TA12450 chr2.cand.154 - hypothetical protein TA12445 chr2.C.cand.348 - PF01398 Mov34/MPN/PAD-1 family TA12440 chr2.C.cand.349 - hypothetical protein TA12435 chr2.C.cand.350 - 60S ribosomal protein l30 TA12430 chr2.C.cand.351 - beta adaptin PF01602 Adaptin N terminal region TA12425 chr2.cand.152 - initiation factor 3 subunit 11 TA12415 chr2.C.cand.352 - conserved hypothetical protein TA12410 all_bases.cand.1537 - pfcg8-like protein; 1 probable transmembrane helix predicted for TA12410 by TMHMM2.0 at aa 113-135 TA12405 chr2.cand.151 - hypothetical protein, conserved TA12400 chr2.cand.150 - score = 9.38 TA12395 chr2.C.cand.354 - score = 8.71 TA12390 chr2.cand.149 - 40s ribosomal protein s11 TA12385 all_bases.cand.1539 - hypothetical protein, conserved, pf10_0097 TA12380 chr2.cand.148 - hypothetical protein TA12375 all_bases.cand.1540 - hypothetical protein, conserved, pf08_0043 TA12370 chr2.C.cand.358 - possible transporter, PF00083 Sugar (and other) transporter; 12 probable transmembrane helices predicted for TA12370 by TMHMM2.0 at aa 35-54, 100-122, 127-144, 154-176, 183-202, 217-236, 294-316, 331-350, 357-376, 380-402, 409-431 and 446-468; Signal anchor predicted for TA12370 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.704) with cleavage site probability 0.001 between residues 54 and 55 TA12360 all_bases.cand.1542 - rna helicase TA12355 chr2.C.cand.360 - conserved hypothetical protein TA12350 chr2.C.cand.362 - sec22 vesicle trafficking protein-like 1, synaptobrevin motif; 1 probable transmembrane helix predicted for TA12350 by TMHMM2.0 at aa 215-234 TA12345 chr2.C.cand.363 - t-complex protein 1 epsilon subunit, putative TA12340 all_bases.C.cand.270 - ubiquitin-conjugating enzyme e2 TA12335 chr2.C.cand.364 - PF03372 Endonuclease/Exonuclease/phosphatase family TA12330 chr2.C.cand.365 - DEAD box RNA helicase TA12325 all_bases.cand.1546 - hypothetical protein, partly conserved, pfc0970w, transmembrane domains; 5 probable transmembrane helices predicted for TA12325 by TMHMM2.0 at aa 156-178, 377-399, 473-490, 555-577 and 581-603 TA12320 chr2.cand.144 - hypothetical protein TA12315 chr2.cand.143 - hypothetical protein TA12295 chr2.C.cand.367 - DnaJ, signal peptide, apicoplast targetting sequence TA12290 chr2.C.cand.368 - hypothetical protein TA12285 chr2.C.cand.369 - hypothetical protein TA12280 chr2.C.cand.370 - hypothetical protein, conserved, pfl1655C TA12275 chr2.C.cand.370 - hypothetical protein TA12270 chr2.C.cand.371 - hypothetical protein TA12265 chr2.C.cand.372 - hypothetical protein TA12260 chr2.C.cand.373 - hypothetical protein TA12255 chr2.cand.142 - hypothetical protein TA12245 chr2.cand.141 - hypothetical protein; 1 probable transmembrane helix predicted for TA12245 by TMHMM2.0 at aa 9-31 TA12240 chr2.C.cand.374 - hypothetical protein, low similarity to 50S ribosomal S9 TA12235 all_bases.C.cand.267 - WD repeat protein; WD repeat protein, putative TA12230 chr2.C.cand.375 - anthranilate synthase, PF00218 Indole-3-glycerol phosphate synthase; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA12230 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA12230 by SignalP 2.0 HMM (Signal peptide probability 0.054, signal anchor probability 0.606) with cleavage site probability 0.014 between residues 32 and 33 TA12225 chr2.C.cand.376 - hypothetical protein, signal peptide, transmembrane domain; 1 probable transmembrane helix predicted for TA12225 by TMHMM2.0 at aa 392-414; Signal peptide predicted for TA12225 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22 TA12220 chr2.C.cand.377 - conserved hypothetical protein, transmembrane domains; 4 probable transmembrane helices predicted for TA12220 by TMHMM2.0 at aa 210-228, 245-262, 272-291 and 304-326 TA12215 all_bases.cand.1558 - conserved hypothetical protein, transmembrane domain; 1 probable transmembrane helix predicted for TA12215 by TMHMM2.0 at aa 48-67; Signal anchor predicted for TA12215 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.961) with cleavage site probability 0.000 between residues 62 and 63 TA12210 chr2.cand.137 - RNA binding protein, PF00076 RNA recognition motif TA12190 DNA binding protein PF02891 MIZ zinc finger TA12185 Signal anchor predicted for TA12185 by SignalP 2.0 HMM (Signal peptide probability 0.266, signal anchor probability 0.617) with cleavage site probability 0.214 between residues 29 and 30 TA12180 7 probable transmembrane helices predicted for TA12180 by TMHMM2.0 at aa 12-34, 44-66, 227-249, 271-293, 300-322, 370-392 and 427-449 TA12165 Possible signal peptide present; 1 probable transmembrane helix predicted for TA12165 by TMHMM2.0 at aa 123-145; Signal peptide predicted for TA12165 by SignalP 2.0 HMM (Signal peptide probability 0.728, signal anchor probability 0.186) with cleavage site probability 0.677 between residues 25 and 26 TA12155 ATP synthase delta chain, mitochondrial, PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain TA12095 Pfam hit to mitochondrion-associated cytochrome c oxidase assembly factor. PF02630 SCO1/SenC TA12075 Signal peptide predicted for TA12075 by SignalP 2.0 HMM (Signal peptide probability 0.866, signal anchor probability 0.120) with cleavage site probability 0.390 between residues 23 and 24 TA12050 Contains possible signal peptide; 1 probable transmembrane helix predicted for TA12050 by TMHMM2.0 at aa 21-43 TA12045 membrane protein, contains signal peptide; 11 probable transmembrane helices predicted for TA12045 by TMHMM2.0 at aa 21-43, 58-77, 84-106, 116-138, 145-167, 182-204, 308-330, 345-367, 380-399, 409-431 and 489-511; Signal peptide predicted for TA12045 by SignalP 2.0 HMM (Signal peptide probability 0.631, signal anchor probability 0.026) with cleavage site probability 0.309 between residues 32 and 33 TA12025 1 probable transmembrane helix predicted for TA12025 by TMHMM2.0 at aa 287-309 TA12020 Contains possible signal sequence TA12005 8 probable transmembrane helices predicted for TA12005 by TMHMM2.0 at aa 52-74, 89-111, 118-137, 147-169, 240-262, 307-329, 336-358 and 363-385; Signal anchor predicted for TA12005 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.768) with cleavage site probability 0.001 between residues 21 and 22 TA11985 1 probable transmembrane helix predicted for TA11985 by TMHMM2.0 at aa 713-735 TA11975 mitochondrial processing peptidase alpha subunit PF00675 Insulinase (Peptidase family M16) TA11965 Contains putative signal peptide, P-,Q-rich family 2, PF02178 AT hook motif; Signal peptide predicted for TA11965 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.000) with cleavage site probability 0.863 between residues 22 and 23 TA11960 Contains possible signal peptide; 1 probable transmembrane helix predicted for TA11960 by TMHMM2.0 at aa 7-29 TA11955 Contains possible signal peptide, P-, Q-rich family; 1 probable transmembrane helix predicted for TA11955 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11955 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.225) with cleavage site probability 0.402 between residues 18 and 19 TA11950 Contains putative signal peptide; 1 probable transmembrane helix predicted for TA11950 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA11950 by SignalP 2.0 HMM (Signal peptide probability 0.602, signal anchor probability 0.000) with cleavage site probability 0.356 between residues 23 and 24 TA11940 1 probable transmembrane helix predicted for TA11940 by TMHMM2.0 at aa 7-29 TA11935 Signal peptide predicted for TA11935 by SignalP 2.0 HMM (Signal peptide probability 0.839, signal anchor probability 0.000) with cleavage site probability 0.581 between residues 22 and 23 TA11930 3 probable transmembrane helices predicted for TA11930 by TMHMM2.0 at aa 4-26, 33-55 and 75-92 TA11915 Contains possible signal peptide; Signal peptide predicted for TA11915 by SignalP 2.0 HMM (Signal peptide probability 0.900, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 22 and 23 TA11905 Signal peptide predicted for TA11905 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.468 between residues 17 and 18 TA11890 chr2.C.cand.417 - hypothetical protein, signal peptide; 1 probable transmembrane helix predicted for TA11890 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA11890 by SignalP 2.0 HMM (Signal peptide probability 0.208, signal anchor probability 0.686) with cleavage site probability 0.089 between residues 29 and 30 TA11885 human hepatopoietin-like protein, putative TA11875 4 probable transmembrane helices predicted for TA11875 by TMHMM2.0 at aa 36-55, 70-92, 113-135 and 139-161 TA11865 chr2.C.cand.419 -conserved hypothetical protein TA11810 5 probable transmembrane helices predicted for TA11810 by TMHMM2.0 at aa 145-167, 197-219, 292-314, 324-346 and 423-445 TA11805 some similarity to erythrocyte membrane-associated antigen; 1 probable transmembrane helix predicted for TA11805 by TMHMM2.0 at aa 460-479; Signal peptide predicted for TA11805 by SignalP 2.0 HMM (Signal peptide probability 0.632, signal anchor probability 0.000) with cleavage site probability 0.540 between residues 25 and 26 TA11800 Shows weak similarity to acyl phosphatases TA11790 Shows some similarity to cyclins TA11780 KOW motif, signal peptide, apicoplast target sequence TA11770 Contains possible signal peptide and apicoplast target sequence; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11770 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.002) with cleavage site probability 0.653 between residues 18 and 19 TA11755 Contains possible signal peptide; 1 probable transmembrane helix predicted for TA11755 by TMHMM2.0 at aa 7-24; Signal peptide predicted for TA11755 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.305) with cleavage site probability 0.539 between residues 26 and 27 TA11745 10 probable transmembrane helices predicted for TA11745 by TMHMM2.0 at aa 434-456, 466-488, 524-543, 558-575, 619-638, 658-675, 687-709, 719-741, 762-784 and 799-816 TA11740 3 probable transmembrane helices predicted for TA11740 by TMHMM2.0 at aa 77-99, 150-172 and 185-219 TA11690 1 probable transmembrane helix predicted for TA11690 by TMHMM2.0 at aa 1485-1507 TA11685 apicoplast phe trna synthetase, signal peptide present, possible apicoplast target sequence present, PF01409 tRNA synthetases class II core domain (F), PF03147 Ferredoxin-fold anticodon binding domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA11685 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA11685 by SignalP 2.0 HMM (Signal peptide probability 0.945, signal anchor probability 0.037) with cleavage site probability 0.596 between residues 23 and 24 TA11680 Weak Pfam hit to MAC/Perforin domain;e=0.00011;codon 333-653; contains possible signal peptide; Signal peptide predicted for TA11680 by SignalP 2.0 HMM (Signal peptide probability 0.718, signal anchor probability 0.000) with cleavage site probability 0.614 between residues 21 and 22 TA11660 2 probable transmembrane helices predicted for TA11660 by TMHMM2.0 at aa 586-608 and 643-665 TA11625 1 probable transmembrane helix predicted for TA11625 by TMHMM2.0 at aa 99-121 TA11600 1 probable transmembrane helix predicted for TA11600 by TMHMM2.0 at aa 849-871 TA11595 Contains possible transmembrane domains; 2 probable transmembrane helices predicted for TA11595 by TMHMM2.0 at aa 133-151 and 155-174 TA11575 Possible signal sequence and apicoplast target sequence present; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11575 by SignalP 2.0 HMM (Signal peptide probability 0.662, signal anchor probability 0.020) with cleavage site probability 0.440 between residues 21 and 22 TA11570 4 probable transmembrane helices predicted for TA11570 by TMHMM2.0 at aa 112-134, 169-191, 211-232 and 271-293 TA11565 1 probable transmembrane helix predicted for TA11565 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA11565 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.983) with cleavage site probability 0.000 between residues 61 and 62 TA11515 1 probable transmembrane helix predicted for TA11515 by TMHMM2.0 at aa 108-130 TA11505 Possible transmembrane domains present; 3 probable transmembrane helices predicted for TA11505 by TMHMM2.0 at aa 66-88, 98-120 and 160-182 TA11495 Contains putative signal peptide; 1 probable transmembrane helix predicted for TA11495 by TMHMM2.0 at aa 20-37; Signal anchor predicted for TA11495 by SignalP 2.0 HMM (Signal peptide probability 0.154, signal anchor probability 0.606) with cleavage site probability 0.088 between residues 42 and 43 TA11465 Contains a putative signal peptide and a possible EGF-like domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11465 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.733 between residues 21 and 22 TA11460 Contains putative signal petideand transmembrane domain; 5 probable transmembrane helices predicted for TA11460 by TMHMM2.0 at aa 12-34, 49-71, 91-113, 133-155 and 162-179 TA11450 chr2.cand.54 - conserved hypothetical protein, kelch motif, Histidine kinase-like ATPases domain TA11435 The P. falciparum hypothetical protein mal13p1.81pf is longer at Nterm; 2 probable transmembrane helices predicted for TA11435 by TMHMM2.0 at aa 49-71 and 92-114 TA16080 internal splicing possible exon III TA15885 Contains 5 putative transmembrane domains; 5 probable transmembrane helices predicted for TA15885 by TMHMM2.0 at aa 90-109, 129-148, 224-246, 253-270 and 285-304 TA15775 Contains putative signal peptide TA15715 1 probable transmembrane helix predicted for TA15715 by TMHMM2.0 at aa 27-49; Signal anchor predicted for TA15715 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.990) with cleavage site probability 0.000 between residues 43 and 44 TA15660 1 probable transmembrane helix predicted for TA15660 by TMHMM2.0 at aa 36-58; Signal anchor predicted for TA15660 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues -1 and 0 TA15605 1 probable transmembrane helix predicted for TA15605 by TMHMM2.0 at aa 75-97 TA15440 50S ribosomal protein l24, no apparent signal or apicoplast target sequence present, contains putative Pfam (PF00467) KOW motif TA15280 Contains putative Pafm (PF00397) WW domain TA15060 putative regulatory protein, C-terminus: 2 x PF00642 Zinc finger C-x8-C-x5-C-x3-H type TA15000 2 probable transmembrane helices predicted for TA15000 by TMHMM2.0 at aa 201-223 and 243-265 TA14290 Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA14290 by TMHMM2.0 at aa 5-23; Signal peptide predicted for TA14290 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.006) with cleavage site probability 0.640 between residues 20 and 21 TA13960 2 probable transmembrane helices predicted for TA13960 by TMHMM2.0 at aa 62-84 and 162-184 TA13955 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA13955 by SignalP 2.0 HMM (Signal peptide probability 0.793, signal anchor probability 0.199) with cleavage site probability 0.482 between residues 21 and 22 TA13795 hypothetical protein, conserved TA13465 all_bases.C.cand.171 - nmt1, PF01233 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain, PF02799 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain TA13245 Signal peptide predicted for TA13245 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.001) with cleavage site probability 0.516 between residues 24 and 25 TA13190 PF02136 Nuclear transport factor 2 (NTF2) domain TA13185 Contains a putative signal peptide; Signal peptide predicted for TA13185 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.873 between residues 17 and 18 TA12910 PF00808 Histone-like transcription factor (CBF/NF-Y) and archaeal histone, PF02969 TATA box binding protein associated factor (TAF) TA12695 Putative signal peptide and apicoplast target sequence present TA12420 1 probable transmembrane helix predicted for TA12420 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA12420 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.644) with cleavage site probability 0.044 between residues 29 and 30 TA12365 1 probable transmembrane helix predicted for TA12365 by TMHMM2.0 at aa 123-145; GPI-Anchor Signal predicted for TA12365 by DGPI v2.04, no cleavage site predicted TA12305 1 probable transmembrane helix predicted for TA12305 by TMHMM2.0 at aa 784-806 TA12035 Contains putative signal peptide; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA12035 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.000) with cleavage site probability 0.500 between residues 18 and 19 TA11980 hypothetical protein, conserved TA11925 3 probable transmembrane helices predicted for TA11925 by TMHMM2.0 at aa 46-68, 186-208 and 223-245 TA11760 Contains a putative signal peptide TA11705 Shows weak hit (4.4e-06) to Pfam PF00169 PH domain TA11650 chr2.cand.5 - hypothetical protein, low similarity to replication factor TA11645 chr2.C.cand.515 - hypothetical protein TA11590 chr2.C.cand.516 - hypothetical protein TA11485 chr2.cand.3 - hypothetical protein, signal peptide; Signal peptide predicted for TA11485 by SignalP 2.0 HMM (Signal peptide probability 0.950, signal anchor probability 0.000) with cleavage site probability 0.394 between residues 14 and 15 TA11480 chr2.C.cand.517 - hypothetical protein, signal peptide; Signal peptide predicted for TA11480 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.000) with cleavage site probability 0.493 between residues 22 and 23 TA11425 10 probable transmembrane helices predicted for TA11425 by TMHMM2.0 at aa 141-163, 175-197, 290-312, 319-341, 398-420, 839-861, 906-928, 974-993, 997-1019 and 1080-1102 TA11420 Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA11420 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11420 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.606 between residues 22 and 23 TA11415 Contains a putative signal peptide TA11410 contains a putative signal peptide; 1 probable transmembrane helix predicted for TA11410 by TMHMM2.0 at aa 257-276; Signal peptide predicted for TA11410 by SignalP 2.0 HMM (Signal peptide probability 0.835, signal anchor probability 0.000) with cleavage site probability 0.828 between residues 21 and 22 TA11405 Contains a putative signal peptide TA11400 Contains a putatice signal peptide; Signal peptide predicted for TA11400 by SignalP 2.0 HMM (Signal peptide probability 0.717, signal anchor probability 0.000) with cleavage site probability 0.704 between residues 20 and 21 TA11395 Contains a putative signal peptide TA11390 signal peptide, telomeric PQ rich family protein; 1 probable transmembrane helix predicted for TA11390 by TMHMM2.0 at aa 494-516; Signal peptide predicted for TA11390 by SignalP 2.0 HMM (Signal peptide probability 0.930, signal anchor probability 0.000) with cleavage site probability 0.918 between residues 21 and 22 TA11385 chr2.C.cand.525 - partial P,Q-rich family; Signal peptide predicted for TA11385 by SignalP 2.0 HMM (Signal peptide probability 0.701, signal anchor probability 0.000) with cleavage site probability 0.690 between residues 21 and 22 TA09420 Tap387d05.p1c.cand.2 - score = 20.90 TA09425 Tap387d05.p1c.cand.3 - score = 20.68; SMART 1 transmembrane domain at aa 13-35; 1 probable transmembrane helix predicted for TA09425 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09425 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.754) with cleavage site probability 0.001 between residues 40 and 41 TA09430 Tap387d05.p1c.cand.4 - score = 31.52; Signal peptide predicted for TA09430 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.076) with cleavage site probability 0.454 between residues 21 and 22 TA09435 Tap387d05.p1c.cand.5 - score = 16.83 TA09440 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA09440 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA09440 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26 TA09445 Tap387d05.p1c.cand.6 - score = 49.56; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA09445 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA09445 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26 TA09450 Tap387d05.p1c.cand.7 - score = 196.75; Signal peptide predicted for TA09450 by SignalP 2.0 HMM (Signal peptide probability 0.770, signal anchor probability 0.001) with cleavage site probability 0.657 between residues 25 and 26 TA17565 TapBAC24e05.p1k.cand.5 - score = 89.63 TA17560 TapBAC24e05.p1k.cand.4 - score = 10.34; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA17560 by TMHMM2.0 at aa 5-27; Signal anchor predicted for TA17560 by SignalP 2.0 HMM (Signal peptide probability 0.319, signal anchor probability 0.674) with cleavage site probability 0.117 between residues 25 and 26 TA17555 TapBAC24e05.p1k.C.cand.2 - score = 35.12; SMART 1 transmembrane domain at aa 13-30; 1 probable transmembrane helix predicted for TA17555 by TMHMM2.0 at aa 13-30; Signal anchor predicted for TA17555 by SignalP 2.0 HMM (Signal peptide probability 0.004, signal anchor probability 0.714) with cleavage site probability 0.004 between residues 30 and 31 TA17550 TapBAC24e05.p1k.C.cand.3 - score = 27.84; Signal peptide predicted for TA17550 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.017) with cleavage site probability 0.579 between residues 21 and 22 TA17545 note; TapBAC24e05.p1k.cand.3 - score = 20.67; Signal peptide predicted for TA17545 by SignalP 2.0 HMM (Signal peptide probability 0.891, signal anchor probability 0.087) with cleavage site probability 0.866 between residues 20 and 21 TA17540 note; TapBAC24e05.p1k.cand.2 - score = 24.02; Signal peptide predicted for TA17540 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21 TA17535 TapBAC24e05.p1k.cand.1 - score = 29.29; Signal peptide predicted for TA17535 by SignalP 2.0 HMM (Signal peptide probability 0.951, signal anchor probability 0.026) with cleavage site probability 0.914 between residues 20 and 21 TA02740 Tap-140g05.q1c.cand.33 - score = 28.44; Signal peptide predicted for TA02740 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.019) with cleavage site probability 0.925 between residues 20 and 21 TA02735 Tap-140g05.q1c.cand.32 - score = 12.13 TA02730 note; Tap-140g05.q1c.C.cand.1 - score = 55.24; SMART 7 transmembrane domains at aa 140-162, 175-197, 273-292, 299-318, 328-350, 401-423 and 438-460; 2 AAA (SM0382) domains at aa 549-753, E()=1.64e-03; 1265-1449, E()=1.55e-01; pfam:ABC_membrane (PF00664) at aa 848-1132, E()=8.30e-02; 12 probable transmembrane helices predicted for TA02730 by TMHMM2.0 at aa 140-162, 175-197, 273-292, 299-318, 328-350, 401-423, 438-460, 838-860, 901-923, 959-981, 996-1018 and 1083-1105 TA02725 note; Tap-140g05.q1c.cand.30 - score = 53.79; 1 probable transmembrane helix predicted for TA02725 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA02725 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.115) with cleavage site probability 0.569 between residues 22 and 23 TA02720 note; Tap-140g05.q1c.C.cand.2 - score = 59.78; SMART 12 transmembrane domains at aa 140-162, 175-197, 273-292, 299-318, 328-350, 401-423, 438-460, 838-860, 901-923, 959-981, 996-1018 and 1083-1105; 2 AAA (SM0382) at aa 549-753, E()=1.89e-03; 1265-1496, E()=1.12e-01; 12 probable transmembrane helices predicted for TA02720 by TMHMM2.0 at aa 140-162, 175-197, 273-292, 299-318, 328-350, 401-423, 438-460, 838-860, 901-923, 959-981, 996-1018 and 1083-1105 TA02715 note; Tap-140g05.q1c.cand.28 - score = 52.92; 1 probable transmembrane helix predicted for TA02715 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA02715 by SignalP 2.0 HMM (Signal peptide probability 0.937, signal anchor probability 0.063) with cleavage site probability 0.452 between residues 21 and 22 TA02710 note; Tap-140g05.q1c.cand.27 - score = 14.52; 1 probable transmembrane helix predicted for TA02710 by TMHMM2.0 at aa 7-29; Signal anchor predicted for TA02710 by SignalP 2.0 HMM (Signal peptide probability 0.295, signal anchor probability 0.686) with cleavage site probability 0.216 between residues 20 and 21 TA02705 note; Tap-140g05.q1c.cand.26 - score = 14.61 TA02700 note; Tap-140g05.q1c.cand.25 - score = 36.59; SMART pfam:Ribosomal_L15 (PF01305) at aa 264-369, E()=1.40e-21; Signal peptide predicted for TA02700 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.022) with cleavage site probability 0.573 between residues 16 and 17 TA02695 SMART 1 transmembrane domain at aa 13-35; pfam:Ribosomal_L17 (PF01196) at aa 64-162, E()=7.10e-15; 1 probable transmembrane helix predicted for TA02695 by TMHMM2.0 at aa 13-35 TA02690 note; Tap-140g05.q1c.cand.24 - score = 32.04 TA02680 note; Tap-140g05.q1c.cand.22 - score = 31.54 TA02675 note; Tap-140g05.q1c.C.cand.3 - score = 34.85; SMART RPOLCX (SM0659) at aa 15-58, E()=5.93e-14 TA02670 note; Tap-140g05.q1c.cand.21 - score = 22.05 TA02665 note; Tap-140g05.q1c.C.cand.4 - score = 22.84; SMART methyltransferase domains TA02660 note; Tap-140g05.q1c.cand.20 - score = 62.64; SMART pfam:Exo_endo_phos (PF03372) at aa 275-588, E()=2.30e-08 TA02655 note; Tap-140g05.q1c.C.cand.5 - score = 18.17 TA02650 note; Tap-140g05.q1c.cand.19 - score = 37.45; SMART DNAJ (SM0271) at aa 121-191, E()=2.82e-13 TA02645 note; Tap-140g05.q1c.cand.18 - score = 10.67; SMART UBCc (SM0212) at aa 10-140, E()=9.73e-05 TA02640 note; Tap-140g05.q1c.cand.17 - score = 20.69; SMART CPDc (SM0577) at aa 61-203, E()=9.67e-53 TA02635 note; Tap-140g05.q1c.C.cand.6 - score = 7.66; SMART pfam:RNA_pol_L (PF01193) at aa 24-114, E()=2.90e-11; 1 probable transmembrane helix predicted for TA02635 by TMHMM2.0 at aa 104-123 TA02630 note; Tap-140g05.q1c.C.cand.7 - score = 68.68 TA02625 note; Tap-140g05.q1c.cand.16 - score = 24.78 TA02620 note; Tap-140g05.q1c.C.cand.8 - score = 16.55; Signal peptide predicted for TA02620 by SignalP 2.0 HMM (Signal peptide probability 0.966, signal anchor probability 0.000) with cleavage site probability 0.769 between residues 16 and 17 TA02615 note; Tap-140g05.q1c.C.cand.9 - score = 9.03 TA02610 note; Tap-140g05.q1c.cand.15 - score = 24.26; SMART pfam:V-ATPase_H (PF03224) at aa 10-384, E()=1.50e-04 TA02605 note; Tap-140g05.q1c.cand.14 - score = 52.27 TA02600 note; Tap-140g05.q1c.C.cand.10 - score = 24.80; SMART 2 RRM (SM0360) at aa 51-125, E()=5.13e-12 and 250-312, E()=6.87e-01 TA02595 note; Tap-140g05.q1c.cand.13 - score = 28.84; SMART S1 (SM0316) at aa 11-95, E()=1.73e+00 TA02590 note; Tap-140g05.q1c.cand.13 - score = 28.84; Signal peptide predicted for TA02590 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19; GPI-Anchor Signal predicted for TA02590 by DGPI v2.04 with cleavage site probability 0.172 near 339 TA02585 note; Tap-140g05.q1c.cand.12 - score = 16.66; Signal peptide predicted for TA02585 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.000) with cleavage site probability 0.721 between residues 18 and 19; GPI-Anchor Signal predicted for TA02585 by DGPI v2.04 with cleavage site probability 0.49879998 near 157 TA02580 note; Tap-140g05.q1c.cand.11 - score = 26.39; Signal peptide predicted for TA02580 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.000) with cleavage site probability 0.824 between residues 19 and 20; GPI-Anchor Signal predicted for TA02580 by DGPI v2.04, no cleavage site predicted TA02575 note; Tap-140g05.q1c.C.cand.11 - score = 30.75 TA02570 note; Tap-140g05.q1c.cand.10 - score = 15.69 TA02565 note; Tap-140g05.q1c.cand.9 - score = 20.92; SMART 3 WD40 (SM0320) domains at aa 56-96, E()=9.51e+01; 149-197, E()=5.10e-06; 220-262, E()=2.38e+01 TA02560 note; Tap-140g05.q1c.C.cand.12 - score = 20.62; SMART 4 transmembrane domains at aa 265-287, 302-324, 358-376 and 391-413; 4 probable transmembrane helices predicted for TA02560 by TMHMM2.0 at aa 265-287, 302-324, 358-376 and 391-413 TA02555 note; Tap-140g05.q1c.C.cand.13 - score = 19.72 TA02550 note; Tap-140g05.q1c.cand.8 - score = 26.68; SMART S_TKc (SM0220) at aa 15-319, E()=3.68e-81 TA02545 note; Tap-140g05.q1c.C.cand.14 - score = 105.54; SMART pfam:CSPase_sm_chain (PF00988) at aa 19-180, E()=8.50e-63; pfam:GATase (PF00117) at aa 293-472, E()=3.50e-29; 2 pfam:CSPase_L_chain (PF00289) at aa 503-623, E()=1.40e-51; 1136-1250, E()=1.90e-12; pfam:CPSase_L_D2 (PF02786) at aa 625-865, E()=6.90e-112; pfam:CPSase_L_D3 (PF02787) at aa 943-1082, E()=8.50e-43; pfam:Dala_Dala_ligas (PF01820) at aa 1148-1448, E()=2.00e-02; pfam:MGS (PF2141) at aa 1521-1661, E()=9.20e-03 TA02540 note; Tap-140g05.q1c.C.cand.15 - score = 19.25; SMART pfam:NUDIX (PF00293) at aa 104-231, E()=9.70e-14 TA02535 note; Tap-140g05.q1c.C.cand.16 - score = 11.10 TA02530 note; Tap-140g05.q1c.cand.7 - score = 15.68 TA02525 SMART pfam:Ribosomal_S27e (PF01667) at aa 26-80, E()=6.30e-26 TA02520 note; Tap-140g05.q1c.cand.6 - score = 25.76 TA02515 note; Tap-140g05.q1c.cand.5 - score = 43.61 TA02510 Tap-140g05.q1c.cand.5 - score = 43.61; SMART pfam:asp (PF00026) at aa 89-485, E()=1.50e-66; 1 probable transmembrane helix predicted for TA02510 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA02510 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.310) with cleavage site probability 0.488 between residues 25 and 26 TA02505 note; Tap-140g05.q1c.C.cand.17 - score = 21.11; 1 probable transmembrane helix predicted for TA02505 by TMHMM2.0 at aa 7-29 TA02500 note; Tap-140g05.q1c.C.cand.18 - score = 19.46; SMART 4 EFh (SM0054) domains at aa 35-63, E()=1.24e-06; 71-99, E()=9.11e-05; 108-136, E()=8.25e+00; 144-712, E()=1.42e-06 TA02495 note; Tap-140g05.q1c.C.cand.19 - score = 170.27 TA02490 Tap-140g05.q1c.C.cand.19 - score = 170.27 TA02485 note; Tap-140g05.q1c.cand.2 - score = 18.79; SMART pfam:sugar_tr (PF00083) at aa 12-472, E()=4.60e-62; 12 probable transmembrane helices predicted for TA02485 by TMHMM2.0 at aa 7-29, 58-80, 92-114, 119-138, 145-167, 193-215, 278-300, 315-337, 344-362, 377-399, 412-434 and 438-460; Signal peptide predicted for TA02485 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.022) with cleavage site probability 0.648 between residues 28 and 29 TA02480 note; Tap-140g05.q1c.cand.1 - score = 21.12; SMART pfam:sugar_tr (PF00083) at aa 12-472, E()=1.10e-59; 12 probable transmembrane helices predicted for TA02480 by TMHMM2.0 at aa 13-32, 58-80, 92-114, 119-138, 145-167, 193-215, 278-300, 315-337, 344-362, 377-399, 412-434 and 438-460; Signal peptide predicted for TA02480 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.147) with cleavage site probability 0.375 between residues 28 and 29 TA03170 Tap-24g11.q1c.cand.1 - score = 15.00; 6 probable transmembrane helices predicted for TA03170 by TMHMM2.0 at aa 80-102, 117-137, 144-166, 202-224, 330-352 and 362-379 TA03175 note; Tap-24g11.q1c.C.cand.235 - score = 58.41; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03175 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.529 between residues 19 and 20 TA03180 note; Tap-24g11.q1c.cand.2 - score = 40.16 TA03185 note; Tap-24g11.q1c.cand.3 - score = 13.88; 1 probable transmembrane helix predicted for TA03185 by TMHMM2.0 at aa 76-93 TA03190 note; Tap-24g11.q1c.cand.4 - score = 13.32 TA03195 note; Tap-24g11.q1c.cand.5 - score = 23.14 TA03200 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03200 by SignalP 2.0 HMM (Signal peptide probabilty 0.974, signal anchor probability 0.000) with cleavage site probability 0.596 between residues 16 and 17 TA03205 note; Tap-24g11.q1c.C.cand.234 - score = 16.31 TA03210 note; Signal peptide predicted for TA03210 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.988 between residues 17 and 18 TA03265 note; Tap-24g11.q1c.C.cand.233 - score = 20.48 TA03270 note; Tap-24g11.q1c.cand.9 - score = 18.68 TA03375 note TA03430 note; Tap-24g11.q1c.C.cand.230 - score = 12.58 TA03435 note; Tap-24g11.q1c.cand.10 - score = 12.58; 9 probable transmembrane helices predicted for TA03435 by TMHMM2.0 at aa 7-29, 96-118, 194-216, 399-418, 438-460, 480-502, 507-529, 539-561 and 673-695 TA03540 note; Tap-24g11.q1c.C.cand.229 - score = 13.66; Signal peptide predicted for TA03540 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.953 between residues 17 and 18 TA03595 note; Tap-24g11.q1c.C.cand.228 - score = 18.45 TA03650 note; Tap-24g11.q1c.C.cand.227 - score = 63.03 TA03705 note; Tap-24g11.q1c.C.cand.226 - score = 20.08 TA03710 note; Tap-24g11.q1c.cand.11 - score = 19.71 TA03765 note; Tap-24g11.q1c.cand.12 - score = 40.59 TA03820 note; Tap-24g11.q1c.cand.13 - score = 18.25 TA03875 note; Tap-24g11.q1c.cand.14 - score = 9.29; 1 probable transmembrane helix predicted for TA03875 by TMHMM2.0 at aa 153-175 TA03930 note; Tap-24g11.q1c.cand.15 - score = 17.09 TA03985 note; Tap-24g11.q1c.cand.16 - score = 10.29 TA04090 note; Tap-24g11.q1c.C.cand.225 - score = 69.25; 3 probable transmembrane helices predicted for TA04090 by TMHMM2.0 at aa 7-25, 528-550 and 563-585 TA04145 note; Tap-24g11.q1c.C.cand.225 - score = 69.25; 0506. Phat adopted as slightly better fasta results TA04150 note; Tap-24g11.q1c.cand.17 - score = 14.96 TA04205 note; Tap-24g11.q1c.cand.19 - score = 8.55 TA04310 note; Tap-24g11.q1c.C.cand.224 - score = 6.85 TA04315 note; Tap-24g11.q1c.cand.22 - score = 34.00 TA04420 note; Tap-24g11.q1c.C.cand.223 - score = 15.57 TA04425 note; Tap-24g11.q1c.cand.23 - score = 6.87 TA04585 note; Tap-24g11.q1c.C.cand.222 - score = 27.91 TA04640 note; Tap-24g11.q1c.C.cand.221 - score = 49.38; 13 probable transmembrane helices predicted for TA04640 by TMHMM2.0 at aa 52-74, 89-111, 132-154, 159-181, 188-207, 222-244, 251-270, 275-297, 304-326, 485-504, 590-608, 613-630 and 637-656 TA04860 note; Tap-24g11.q1c.C.cand.219 - score = 25.13 TA04915 note; Tap-24g11.q1c.C.cand.218 - score = 29.59; 10 probable transmembrane helices predicted for TA04915 by TMHMM2.0 at aa 13-35, 48-70, 224-246, 256-278, 285-307, 322-344, 383-405, 478-500, 521-543 and 547-569 TA04970 note; Tap-24g11.q1c.C.cand.217 - score = 17.92; 11 probable transmembrane helices predicted for TA04970 by TMHMM2.0 at aa 24-46, 75-97, 129-151, 163-185, 190-212, 225-247, 280-302, 315-334, 354-376, 397-419 and 424-446 TA04975 note; Tap-24g11.q1c.cand.27 - score = 12.87 TA05135 note; Tap-24g11.q1c.C.cand.216 - score = 30.30; 11 probable transmembrane helices predicted for TA05135 by TMHMM2.0 at aa 32-51, 66-88, 116-138, 142-164, 185-207, 217-236, 289-311, 326-348, 361-383, 387-409 and 626-648; GPI-Anchor Signal predicted for TA05135 by DGPI v2.04, no cleavage site predicted TA05140 note; Tap-24g11.q1c.cand.29 - score = 11.70 TA05195 note; Tap-24g11.q1c.cand.30 - score = 37.26; 2 probable transmembrane helices predicted for TA05195 by TMHMM2.0 at aa 76-98 and 701-723 TA05260 note; Tap-24g11.q1c.C.cand.215 - score = 10.74 TA05265 note; Tap-24g11.q1c.C.cand.214 - score = 39.09; 1 probable transmembrane helix predicted for TA05265 by TMHMM2.0 at aa 139-161 TA05270 note; Tap-24g11.q1c.cand.31 - score = 28.53 TA05275 note; Tap-24g11.q1c.C.cand.213 - score = 92.63 TA05280 note; Tap-24g11.q1c.C.cand.212 - score = 10.81; 4 probable transmembrane helices predicted for TA05280 by TMHMM2.0 at aa 21-43, 53-75, 82-104 and 124-146 TA05285 note; Tap-24g11.q1c.cand.32 - score = 22.69 TA05290 There is small overlap at the 3' end with gene TA05295; 1 probable transmembrane helix predicted for TA05290 by TMHMM2.0 at aa 143-165 TA05295 There is small overlap at the 3' end with gene TA05290 TA05300 note; Tap-24g11.q1c.C.cand.209 - score = 23.07 TA05305 note; Tap-24g11.q1c.C.cand.208 - score = 15.41 TA05315 note; Tap-24g11.q1c.cand.35 - score = 12.42; Signal peptide predicted for TA05315 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.427 between residues 19 and 20; GPI-Anchor Signal predicted for TA05315 by DGPI v2.04, no cleavage site predicted TA05320 note; Tap-24g11.q1c.cand.36 - score = 24.03; Signal peptide predicted for TA05320 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.689 between residues 18 and 19; GPI-Anchor Signal predicted for TA05320 by DGPI v2.04 with cleavage site probability 0.74819994 near 169 TA05325 note; Tap-24g11.q1c.cand.37 - score = 67.43 TA05330 note; Tap-24g11.q1c.cand.38 - score = 55.84 TA05335 note; Tap-24g11.q1c.cand.39 - score = 41.27 TA05340 note; Tap-24g11.q1c.cand.40 - score = 18.77 TA05345 note; Tap-24g11.q1c.C.cand.207 - score = 22.99 TA05350 note; Tap-24g11.q1c.cand.41 - score = 32.51 TA05355 note; Tap-24g11.q1c.cand.42 - score = 116.66 TA05360 note; Tap-24g11.q1c.cand.43 - score = 22.11 TA05365 note; Tap-24g11.q1c.cand.44 - score = 101.99 TA05370 note; Tap-24g11.q1c.cand.44 - score = 101.99 TA05375 note; Tap-24g11.q1c.cand.45 - score = 90.92; Signal peptide predicted for TA05375 by SignalP 2.0 HMM (Signal peptide probability 0.987, signal anchor probability 0.000) with cleavage site probability 0.866 between residues 21 and 22 TA05380 note; Tap-24g11.q1c.cand.46 - score = 35.59 TA05385 note; Tap-24g11.q1c.cand.47 - score = 13.69 TA05390 note; Tap-24g11.q1c.cand.48 - score = 17.12; 1 probable transmembrane helix predicted for TA05390 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA05390 by SignalP 2.0 HMM (Signal peptide probability 0.895, signal anchor probability 0.009) with cleavage site probability 0.447 between residues 21 and 22 TA05395 note; Tap-24g11.q1c.cand.49 - score = 12.61 TA05400 note; Tap-24g11.q1c.cand.50 - score = 63.99; 3 probable transmembrane helices predicted for TA05400 by TMHMM2.0 at aa 649-668, 689-711 and 726-748 TA05405 note; Tap-24g11.q1c.cand.51 - score = 12.73; 1 probable transmembrane helix predicted for TA05405 by TMHMM2.0 at aa 156-178 TA05410 note; Tap-24g11.q1c.C.cand.206 - score = 22.44 TA05415 note; Tap-24g11.q1c.cand.52 - score = 16.09; 6 probable transmembrane helices predicted for TA05415 by TMHMM2.0 at aa 184-206, 211-229, 249-271, 284-306, 327-349 and 359-378 TA05420 note; Tap-24g11.q1c.C.cand.205 - score = 38.15 TA05425 note; Tap-24g11.q1c.C.cand.204 - score = 62.02 TA05430 note; Tap-24g11.q1c.C.cand.204 - score = 62.02 TA05435 note; Tap-24g11.q1c.cand.53 - score = 23.52 TA05440 note; Tap-24g11.q1c.C.cand.203 - score = 35.28; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05440 by SignalP 2.0 HMM (Signal peptide probability 0.939, signal anchor probability 0.035) with cleavage site probability 0.577 between residues 26 and 27 TA05445 note; Tap-24g11.q1c.cand.54 - score = 12.13 TA05450 note; Tap-24g11.q1c.C.cand.202 - score = 40.82 TA05455 note; Tap-24g11.q1c.cand.55 - score = 116.92; 9 probable transmembrane helices predicted for TA05455 by TMHMM2.0 at aa 73-92, 156-178, 191-213, 358-380, 449-471, 974-996, 1028-1050, 1109-1126 and 1133-1155 TA05460 note; Tap-24g11.q1c.cand.56 - score = 10.66 TA05465 note; Tap-24g11.q1c.cand.57 - score = 172.47; 3 probable transmembrane helices predicted for TA05465 by TMHMM2.0 at aa 144-166, 229-251 and 2538-2555 TA05470 note; Tap-24g11.q1c.cand.58 - score = 18.59 TA05475 note; Tap-24g11.q1c.cand.59 - score = 108.02 TA05485 note; Tap-24g11.q1c.cand.60 - score = 57.35 TA05490 note; Tap-24g11.q1c.C.cand.200 - score = 16.47; Tap-24g11.q1c.C.cand.199 - score = 8.31 TA05495 note; Tap-24g11.q1c.cand.61 - score = 32.80; 2 probable transmembrane helices predicted for TA05495 by TMHMM2.0 at aa 5-27 and 241-260; Signal peptide predicted for TA05495 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.559 between residues 24 and 25 TA05500 note; Tap-24g11.q1c.cand.62 - score = 10.83 TA05505 note; Tap-24g11.q1c.C.cand.198 - score = 16.12; 1 probable transmembrane helix predicted for TA05505 by TMHMM2.0 at aa 60-82 TA05510 note; Tap-24g11.q1c.C.cand.197 - score = 21.66; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA05510 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA05510 by SignalP 2.0 HMM (Signal peptide probability 0.941, signal anchor probability 0.011) with cleavage site probability 0.372 between residues 25 and 26 TA05515 note; Tap-24g11.q1c.C.cand.196 - score = 58.07 TA05520 note; Tap-24g11.q1c.C.cand.195 - score = 62.36 TA03215 note; Tap-24g11.q1c.C.cand.195 - score = 62.36; 1 probable transmembrane helix predicted for TA03215 by TMHMM2.0 at aa 744-766 TA03220 note; Tap-24g11.q1c.C.cand.194 - score = 24.53; 11 probable transmembrane helices predicted for TA03220 by TMHMM2.0 at aa 29-51, 124-146, 156-178, 198-217, 227-249, 280-299, 319-341, 362-381, 391-410, 417-439 and 464-483 TA03225 note; Tap-24g11.q1c.C.cand.193 - score = 56.99 TA03230 note; Tap-24g11.q1c.C.cand.192 - score = 37.16; 2 probable transmembrane helices predicted for TA03230 by TMHMM2.0 at aa 99-121 and 386-408 TA03235 note; Tap-24g11.q1c.C.cand.191 - score = 115.84 TA03240 note; Tap-24g11.q1c.C.cand.190 - score = 14.41 TA03245 note; Tap-24g11.q1c.C.cand.189 - score = 9.86 TA03250 note; Tap-24g11.q1c.C.cand.188 - score = 56.06 TA03255 note; Tap-24g11.q1c.cand.64 - score = 10.22 TA03260 note; Tap-24g11.q1c.cand.65 - score = 16.00 TA03275 note; Tap-24g11.q1c.cand.65 - score = 16.00 TA03280 note; Tap-24g11.q1c.C.cand.187 - score = 58.95 TA03285 note; Tap-24g11.q1c.C.cand.187 - score = 58.95 TA03290 note; Tap-24g11.q1c.C.cand.186 - score = 25.04 TA03295 note; Tap-24g11.q1c.cand.66 - score = 53.31 TA03300 note; Tap-24g11.q1c.C.cand.185 - score = 42.57; Signal peptide predicted for TA03300 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.552 between residues 19 and 20 TA03305 note; Tap-24g11.q1c.C.cand.184 - score = 45.48; Signal peptide predicted for TA03305 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.930 between residues 16 and 17 TA03310 note; Tap-24g11.q1c.cand.67 - score = 33.61; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03310 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA03310 by SignalP 2.0 HMM (Signal peptide probability 0.821, signal anchor probability 0.038) with cleavage site probability 0.499 between residues 22 and 23 TA03315 note; Tap-24g11.q1c.C.cand.183 - score = 50.58 TA03320 note; Tap-24g11.q1c.C.cand.182 - score = 36.33 TA03325 note; Tap-24g11.q1c.C.cand.181 - score = 9.76 TA03330 note; Tap-24g11.q1c.C.cand.180 - score = 85.28 TA03335 note; 1 probable transmembrane helix predicted for TA03335 by TMHMM2.0 at aa 865-887 TA03340 note; Tap-24g11.q1c.cand.68 - score = 29.50; 1 probable transmembrane helix predicted for TA03340 by TMHMM2.0 at aa 44-66 TA03345 note; Tap-24g11.q1c.C.cand.178 - score = 21.45 TA03350 Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03350 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA03350 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.121) with cleavage site probability 0.613 between residues 19 and 20 TA03355 note; Tap-24g11.q1c.C.cand.177 - score = 21.14 TA03360 note; Tap-24g11.q1c.C.cand.176 - score = 21.60 TA03365 note; Tap-24g11.q1c.cand.70 - score = 19.59; 1 probable transmembrane helix predicted for TA03365 by TMHMM2.0 at aa 264-286 TA03370 note; Tap-24g11.q1c.C.cand.175 - score = 33.94 TA03380 note; Tap-24g11.q1c.cand.71 - score = 294.95 TA03385 Tap-24g11.q1c.cand.71 - score = 294.95 TA03390 note; Tap-24g11.q1c.C.cand.173 - score = 19.66 TA03395 note; Tap-24g11.q1c.cand.72 - score = 22.13 TA03400 note; Tap-24g11.q1c.cand.74 - score = 18.41 TA03405 note; Tap-24g11.q1c.C.cand.172 - score = 33.36 TA03410 note; Tap-24g11.q1c.C.cand.171 - score = 36.95 TA03415 note; Tap-24g11.q1c.cand.75 - score = 14.33 TA03420 note TA03425 note TA03440 note; Tap-24g11.q1c.C.cand.170 - score = 8.24 TA03445 note; Tap-24g11.q1c.C.cand.169 - score = 31.20 TA03450 note; Tap-24g11.q1c.cand.78 - score = 7.76 TA03455 note; Tap-24g11.q1c.C.cand.168 - score = 37.00 TA03460 note; Tap-24g11.q1c.cand.79 - score = 29.97 TA03465 note; Tap-24g11.q1c.C.cand.167 - score = 40.31 TA03470 note; Tap-24g11.q1c.C.cand.166 - score = 28.81 TA03475 note; Tap-24g11.q1c.C.cand.165 - score = 29.48; Signal peptide predicted for TA03475 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.976 between residues 19 and 20 TA03480 note; Tap-24g11.q1c.C.cand.164 - score = 40.32; 5 probable transmembrane helices predicted for TA03480 by TMHMM2.0 at aa 115-137, 167-189, 196-218, 233-250 and 255-277 TA03485 note TA03490 note; Tap-24g11.q1c.C.cand.163 - score = 9.48 TA03495 note; Tap-24g11.q1c.C.cand.162 - score = 133.02; 2 probable transmembrane helices predicted for TA03495 by TMHMM2.0 at aa 309-328 and 335-357 TA03500 note; Tap-24g11.q1c.C.cand.162 - score = 133.02 TA03505 note; Tap-24g11.q1c.cand.83 - score = 30.43 TA03510 note; Tap-24g11.q1c.cand.84 - score = 35.41 TA03515 note; Tap-24g11.q1c.C.cand.161 - score = 35.44 TA03520 note; Tap-24g11.q1c.C.cand.160 - score = 75.59 TA03525 note; Tap-24g11.q1c.C.cand.158 - score = 76.85 TA03530 note; Tap-24g11.q1c.cand.85 - score = 16.47; Apicoplast targetting peptide predicted by the PlasmoAP tool; 10 probable transmembrane helices predicted for TA03530 by TMHMM2.0 at aa 4-26, 146-163, 178-200, 306-325, 329-351, 385-407, 510-529, 549-571, 576-598 and 611-633; Signal peptide predicted for TA03530 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.792 between residues 23 and 24 TA03535 note; Tap-24g11.q1c.C.cand.157 - score = 16.81 TA03545 note; Tap-24g11.q1c.C.cand.156 - score = 68.47; Signal peptide predicted for TA03545 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.000) with cleavage site probability 0.665 between residues 16 and 17 TA03550 note; Tap-24g11.q1c.C.cand.155 - score = 42.13 TA03555 note; Tap-24g11.q1c.cand.86 - score = 30.40 TA03560 note; Tap-24g11.q1c.C.cand.154 - score = 40.86 TA03565 note; Tap-24g11.q1c.cand.87 - score = 32.00 TA03570 note; Tap-24g11.q1c.C.cand.153 - score = 49.45 TA03575 note; Tap-24g11.q1c.cand.88 - score = 27.83 TA03580 note; Tap-24g11.q1c.C.cand.152 - score = 32.00 TA03585 note; Tap-24g11.q1c.C.cand.151 - score = 31.26 TA03590 note; Tap-24g11.q1c.C.cand.150 - score = 26.94; 12 probable transmembrane helices predicted for TA03590 by TMHMM2.0 at aa 29-51, 64-86, 96-113, 155-177, 192-214, 249-271, 365-384, 410-432, 452-474, 487-506, 526-548 and 569-591; Signal anchor predicted for TA03590 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.659) with cleavage site probability 0.004 between residues 40 and 41 TA03600 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03600 by SignalP 2.0 HMM (Signal peptide probability 0.699, signal anchor probability 0.000) with cleavage site probability 0.599 between residues 18 and 19 TA03605 note; Tap-24g11.q1c.C.cand.149 - score = 13.66 TA03610 note; Tap-24g11.q1c.cand.90 - score = 32.68; 2 probable transmembrane helices predicted for TA03610 by TMHMM2.0 at aa 228-250 and 255-277 TA03615 note; Tap-24g11.q1c.cand.91 - score = 41.88; Signal peptide predicted for TA03615 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19 TA03620 note; Tap-24g11.q1c.C.cand.148 - score = 21.07; 2 probable transmembrane helices predicted for TA03620 by TMHMM2.0 at aa 287-309 and 339-361; Signal peptide predicted for TA03620 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.001) with cleavage site probability 0.580 between residues 21 and 22 TA03625 note; Tap-24g11.q1c.C.cand.147 - score = 22.12 TA03630 note; Tap-24g11.q1c.cand.92 - score = 36.22 TA03635 note; Tap-24g11.q1c.C.cand.146 - score = 16.35 TA03640 note; Tap-24g11.q1c.C.cand.145 - score = 72.33; Signal peptide predicted for TA03640 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 19 and 20; GPI-Anchor Signal predicted for TA03640 by DGPI v2.04, no cleavage site predicted TA03645 note; Tap-24g11.q1c.C.cand.144 - score = 20.44 TA03655 note; Tap-24g11.q1c.cand.93 - score = 47.65 TA03660 note; Tap-24g11.q1c.cand.94 - score = 7.10 TA03665 note TA03670 note; Tap-24g11.q1c.cand.95 - score = 11.38; Signal peptide predicted for TA03670 by SignalP 2.0 HMM (Signal peptide probability 0.613, signal anchor probability 0.000) with cleavage site probability 0.273 between residues 20 and 21 TA03675 note; Tap-24g11.q1c.C.cand.142 - score = 25.82 TA03680 note; Tap-24g11.q1c.C.cand.141 - score = 13.71; Signal peptide predicted for TA03680 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.005) with cleavage site probability 0.453 between residues 22 and 23 TA03685 note; Tap-24g11.q1c.cand.96 - score = 18.70 TA03690 note; Tap-24g11.q1c.C.cand.140 - score = 37.15 TA03695 note; Tap-24g11.q1c.C.cand.139 - score = 22.80; 1 probable transmembrane helix predicted for TA03695 by TMHMM2.0 at aa 13-32 TA03700 note; Tap-24g11.q1c.C.cand.138 - score = 14.42 TA03715 note; Tap-24g11.q1c.cand.97 - score = 43.71 TA03720 note; Tap-24g11.q1c.cand.98 - score = 35.21; 1 probable transmembrane helix predicted for TA03720 by TMHMM2.0 at aa 47-69; Signal anchor predicted for TA03720 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.999) with cleavage site probability 0.000 between residues -1 and 0 TA03725 note; Tap-24g11.q1c.cand.99 - score = 34.22; 1 probable transmembrane helix predicted for TA03725 by TMHMM2.0 at aa 47-69; Signal anchor predicted for TA03725 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.999) with cleavage site probability 0.000 between residues -1 and 0 TA03730 note; Tap-24g11.q1c.cand.100 - score = 76.91; 1 probable transmembrane helix predicted for TA03730 by TMHMM2.0 at aa 46-68; Signal anchor predicted for TA03730 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.925) with cleavage site probability 0.000 between residues -1 and 0 TA03735 note; Tap-24g11.q1c.cand.100 - score = 76.91; 1 probable transmembrane helix predicted for TA03735 by TMHMM2.0 at aa 45-67; Signal anchor predicted for TA03735 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 59 and 60 TA03740 note; Tap-24g11.q1c.cand.101 - score = 24.10; 1 probable transmembrane helix predicted for TA03740 by TMHMM2.0 at aa 38-60; Signal anchor predicted for TA03740 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.840) with cleavage site probability 0.005 between residues 54 and 55 TA03745 note; Tap-24g11.q1c.cand.102 - score = 35.38; 1 probable transmembrane helix predicted for TA03745 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA03745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59 TA03750 note; Tap-24g11.q1c.cand.103 - score = 35.76; 1 probable transmembrane helix predicted for TA03750 by TMHMM2.0 at aa 43-65; Signal anchor predicted for TA03750 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.972) with cleavage site probability 0.000 between residues 58 and 59 TA03755 note; 1 probable transmembrane helix predicted for TA03755 by TMHMM2.0 at aa 894-916; Signal peptide predicted for TA03755 by SignalP 2.0 HMM (Signal peptide probability 0.910, signal anchor probability 0.002) with cleavage site probability 0.441 between residues 18 and 19; GPI-Anchor Signal predicted for TA03755 by DGPI v2.04 with cleavage site probability 0.59159994 near 896 TA03770 note; Tap-24g11.q1c.C.cand.135 - score = 23.35; Signal peptide predicted for TA03770 by SignalP 2.0 HMM (Signal peptide probability 0.777, signal anchor probability 0.000) with cleavage site probability 0.761 between residues 18 and 19 TA03775 note; Tap-24g11.q1c.C.cand.134 - score = 43.67; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA03775 by TMHMM2.0 at aa 2-20; Signal peptide predicted for TA03775 by SignalP 2.0 HMM (Signal peptide probability 0.933, signal anchor probability 0.011) with cleavage site probability 0.655 between residues 17 and 18 TA03780 note; Tap-24g11.q1c.C.cand.133 - score = 125.35 TA03785 note; Tap-24g11.q1c.C.cand.132 - score = 10.72 TA03790 note; Tap-24g11.q1c.C.cand.131 - score = 8.64 TA03795 note; Tap-24g11.q1c.cand.106 - score = 24.38 TA03800 note; Tap-24g11.q1c.cand.107 - score = 28.87 TA03805 note; Tap-24g11.q1c.C.cand.130 - score = 72.39 TA03810 note; Tap-24g11.q1c.C.cand.129 - score = 9.36 TA03815 note; Tap-24g11.q1c.cand.108 - score = 8.80 TA03825 note; Tap-24g11.q1c.cand.109 - score = 14.97; 3 probable transmembrane helices predicted for TA03825 by TMHMM2.0 at aa 219-238, 242-264 and 277-299 TA03830 note; Tap-24g11.q1c.cand.110 - score = 12.98 TA03835 note; Tap-24g11.q1c.cand.111 - score = 67.43; 1 probable transmembrane helix predicted for TA03835 by TMHMM2.0 at aa 13-35 TA03840 note; Tap-24g11.q1c.cand.111 - score = 67.43 TA03845 note; Tap-24g11.q1c.C.cand.127 - score = 82.68; 2 probable transmembrane helices predicted for TA03845 by TMHMM2.0 at aa 36-58 and 203-225 TA03850 Tap-24g11.q1c.C.cand.127 - score = 82.68; Signal peptide predicted for TA03850 by SignalP 2.0 HMM (Signal peptide probability 0.836, signal anchor probability 0.002) with cleavage site probability 0.318 between residues 33 and 34 TA03855 note; Tap-24g11.q1c.C.cand.126 - score = 17.57; 6 probable transmembrane helices predicted for TA03855 by TMHMM2.0 at aa 17-36, 40-62, 69-91, 101-123, 135-157 and 196-218; Signal peptide predicted for TA03855 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.433 between residues 38 and 39 TA03860 note; Tap-24g11.q1c.C.cand.125 - score = 16.14 TA03865 note; Tap-24g11.q1c.cand.113 - score = 28.01; 1 probable transmembrane helix predicted for TA03865 by TMHMM2.0 at aa 7-29 TA03870 note; Tap-24g11.q1c.C.cand.124 - score = 14.22; Signal peptide predicted for TA03870 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18 TA03880 note; Tap-24g11.q1c.C.cand.123 - score = 14.70 TA03885 note; Tap-24g11.q1c.C.cand.122 - score = 10.62 TA03895 note; Tap-24g11.q1c.cand.121 - score = 9.09 TA03900 note; Tap-24g11.q1c.C.cand.121 - score = 31.87; RNA-binding protein, putative TA03905 note; Tap-24g11.q1c.C.cand.121 - score = 31.87 TA03910 note; Tap-24g11.q1c.cand.122 - score = 18.02; Signal peptide predicted for TA03910 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.000) with cleavage site probability 0.649 between residues 15 and 16 TA03915 note; Tap-24g11.q1c.C.cand.120 - score = 8.33 TA03920 note; Tap-24g11.q1c.C.cand.119 - score = 15.13 TA03925 note; Tap-24g11.q1c.C.cand.115 - score = 14.08 TA03935 note; Tap-24g11.q1c.cand.124 - score = 30.31 TA03940 1 probable transmembrane helix predicted for TA03940 by TMHMM2.0 at aa 608-630 TA03945 note; Tap-24g11.q1c.cand.126 - score = 28.71 TA03950 note; Tap-24g11.q1c.cand.126 - score = 28.71; 1 probable transmembrane helix predicted for TA03950 by TMHMM2.0 at aa 10-32; Signal anchor predicted for TA03950 by SignalP 2.0 HMM (Signal peptide probability 0.125, signal anchor probability 0.762) with cleavage site probability 0.107 between residues 26 and 27 TA03955 note; Tap-24g11.q1c.cand.127 - score = 51.59 TA03960 note; Tap-24g11.q1c.cand.127 - score = 51.59 TA03965 note; Tap-24g11.q1c.cand.128 - score = 35.76; 4 probable transmembrane helices predicted for TA03965 by TMHMM2.0 at aa 120-142, 193-215, 284-306 and 389-411 TA03970 note; Tap-24g11.q1c.cand.128 - score = 35.76; 7 probable transmembrane helices predicted for TA03970 by TMHMM2.0 at aa 66-88, 103-125, 145-164, 193-215, 277-299, 314-336 and 343-365 TA03975 note; Tap-24g11.q1c.C.cand.114 - score = 22.48 TA03980 note; Tap-24g11.q1c.C.cand.113 - score = 17.50 TA03990 note; Tap-24g11.q1c.cand.129 - score = 16.46 TA03995 note; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA03995 by SignalP 2.0 HMM (Signal peptide probability 0.931, signal anchor probability 0.019) with cleavage site probability 0.729 between residues 22 and 23 TA04000 note; Tap-24g11.q1c.cand.130 - score = 17.59; 12 probable transmembrane helices predicted for TA04000 by TMHMM2.0 at aa 47-69, 84-106, 113-132, 136-158, 170-189, 199-221, 411-433, 448-470, 483-505, 510-532, 545-567 and 577-599 TA04005 note; Tap-24g11.q1c.cand.131 - score = 14.05; 12 probable transmembrane helices predicted for TA04005 by TMHMM2.0 at aa 48-70, 85-107, 114-133, 137-159, 172-194, 204-223, 355-377, 392-414, 427-449, 454-476, 489-511 and 521-543 TA04010 note; Tap-24g11.q1c.cand.132 - score = 13.66; 12 probable transmembrane helices predicted for TA04010 by TMHMM2.0 at aa 48-70, 83-105, 110-132, 137-159, 174-196, 203-222, 352-374, 387-409, 424-446, 451-473, 488-510 and 517-539 TA04015 12 probable transmembrane helices predicted for TA04015 by TMHMM2.0 at aa 30-52, 72-93, 100-119, 123-145, 157-176, 191-210, 339-361, 376-398, 411-433, 438-460, 472-494 and 504-526 TA04016 11 probable transmembrane helices predicted for TA04016 by TMHMM2.0 at aa 35-57, 70-92, 97-119, 124-146, 161-183, 339-361, 376-398, 411-433, 438-460, 473-495 and 505-527 TA04017 12 probable transmembrane helices predicted for TA04017 by TMHMM2.0 at aa 35-57, 70-92, 97-119, 124-146, 161-183, 190-209, 339-361, 374-396, 411-433, 438-460, 475-497 and 504-526 TA04018 12 probable transmembrane helices predicted for TA04018 by TMHMM2.0 at aa 30-52, 72-93, 100-119, 123-145, 157-176, 191-210, 339-361, 376-398, 411-433, 438-460, 472-494 and 504-526 TA04020 note; Tap-24g11.q1c.cand.134 - score = 7.00; 5 probable transmembrane helices predicted for TA04020 by TMHMM2.0 at aa 35-57, 72-94, 107-129, 158-180 and 185-207 TA04025 note; Tap-24g11.q1c.cand.135 - score = 29.82 TA04030 note; Tap-24g11.q1c.cand.136 - score = 14.78; 6 probable transmembrane helices predicted for TA04030 by TMHMM2.0 at aa 53-70, 75-97, 110-132, 142-159, 179-201 and 268-290; Signal anchor predicted for TA04030 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.777) with cleavage site probability 0.000 between residues -1 and 0 TA04035 note; Tap-24g11.q1c.cand.137 - score = 44.76; 8 probable transmembrane helices predicted for TA04035 by TMHMM2.0 at aa 7-28, 83-104, 132-154, 206-228, 248-270, 306-328, 341-363 and 378-397 TA04040 note; Tap-24g11.q1c.cand.137 - score = 44.76 TA04045 note; Tap-24g11.q1c.cand.138 - score = 56.43 TA04050 note; Tap-24g11.q1c.C.cand.111 - score = 34.67 TA04055 note; Tap-24g11.q1c.cand.139 - score = 24.15; 12 probable transmembrane helices predicted for TA04055 by TMHMM2.0 at aa 38-60, 75-94, 107-129, 133-155, 168-185, 195-212, 233-255, 275-297, 304-326, 336-358, 371-393 and 408-427 TA04060 note; Tap-24g11.q1c.cand.140 - score = 29.57; 12 probable transmembrane helices predicted for TA04060 by TMHMM2.0 at aa 37-59, 74-93, 106-128, 132-154, 167-184, 194-211, 236-258, 273-295, 302-321, 336-358, 370-392 and 407-429 TA04065 note; Tap-24g11.q1c.cand.141 - score = 33.29 TA04070 note; Tap-24g11.q1c.C.cand.110 - score = 21.63 TA04075 note; Tap-24g11.q1c.cand.142 - score = 16.04 TA04080 note; Tap-24g11.q1c.cand.143 - score = 37.47 TA04085 note; Tap-24g11.q1c.C.cand.109 - score = 76.38 TA04095 note; Tap-24g11.q1c.cand.144 - score = 21.03; 2 probable transmembrane helices predicted for TA04095 by TMHMM2.0 at aa 362-384 and 396-415 TA04100 0513. Could not extend upstream; GPI-Anchor Signal predicted for TA04100 by DGPI v2.04 with cleavage site probability 0.1462 near 88 TA04105 note; Tap-24g11.q1c.C.cand.108 - score = 45.42; Signal peptide predicted for TA04105 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.822 between residues 20 and 21 TA04110 note; Tap-24g11.q1c.C.cand.107 - score = 21.38 TA04115 note; Tap-24g11.q1c.C.cand.106 - score = 16.48 TA04120 note; Tap-24g11.q1c.C.cand.105 - score = 16.90; 3 probable transmembrane helices predicted for TA04120 by TMHMM2.0 at aa 198-220, 243-265 and 299-321 TA04125 note; Tap-24g11.q1c.cand.145 - score = 83.69 TA04130 note; Tap-24g11.q1c.C.cand.104 - score = 19.02 TA04135 note; Tap-24g11.q1c.cand.146 - score = 12.51 TA04140 note; Tap-24g11.q1c.C.cand.103 - score = 12.07 TA04155 note; Tap-24g11.q1c.cand.147 - score = 15.12; Signal peptide predicted for TA04155 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.832 between residues 18 and 19; GPI-Anchor Signal predicted for TA04155 by DGPI v2.04, no cleavage site predicted TA04160 note; Tap-24g11.q1c.C.cand.102 - score = 23.66 TA04165 note; Tap-24g11.q1c.cand.148 - score = 121.79 TA04170 note; Tap-24g11.q1c.C.cand.101 - score = 42.77; 12 probable transmembrane helices predicted for TA04170 by TMHMM2.0 at aa 343-362, 369-391, 411-433, 519-538, 543-565, 627-649, 691-713, 726-748, 763-781, 788-807, 822-844 and 950-972 TA04175 1 probable transmembrane helix predicted for TA04175 by TMHMM2.0 at aa 49-71 TA04180 note; Tap-24g11.q1c.cand.149 - score = 7.74 TA04185 note; Tap-24g11.q1c.C.cand.100 - score = 13.89 TA04190 note; Tap-24g11.q1c.cand.150 - score = 37.57 TA04195 9 probable transmembrane helices predicted for TA04195 by TMHMM2.0 at aa 7-24, 34-56, 69-91, 95-114, 127-149, 183-205, 225-247, 262-284 and 291-313 TA04200 note; Tap-24g11.q1c.cand.151 - score = 80.99; 12 probable transmembrane helices predicted for TA04200 by TMHMM2.0 at aa 84-102, 152-174, 313-335, 339-358, 572-594, 609-631, 1344-1366, 1376-1393, 1414-1436, 1456-1478, 1491-1511 and 1531-1553 TA04210 note; Tap-24g11.q1c.C.cand.98 - score = 34.21 TA04215 note; Tap-24g11.q1c.C.cand.97 - score = 65.60 TA04220 note; Tap-24g11.q1c.cand.153 - score = 8.86; 1 probable transmembrane helix predicted for TA04220 by TMHMM2.0 at aa 101-119 TA04225 note; Tap-24g11.q1c.C.cand.96 - score = 47.46; 1 probable transmembrane helix predicted for TA04225 by TMHMM2.0 at aa 32-51; Signal anchor predicted for TA04225 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.813) with cleavage site probability 0.001 between residues 48 and 49 TA04230 note; Tap-24g11.q1c.cand.154 - score = 103.49 TA04235 note; Tap-24g11.q1c.C.cand.95 - score = 14.17; 10 probable transmembrane helices predicted for TA04235 by TMHMM2.0 at aa 21-43, 115-137, 149-171, 176-198, 211-233, 265-287, 300-322, 345-367, 388-410 and 420-442 TA04240 note; Tap-24g11.q1c.C.cand.94 - score = 47.70; 9 probable transmembrane helices predicted for TA04240 by TMHMM2.0 at aa 10-29, 84-106, 116-138, 145-167, 182-204, 276-298, 603-625, 646-668 and 673-695 TA04245 note; Tap-24g11.q1c.C.cand.94 - score = 47.70; 1 probable transmembrane helix predicted for TA04245 by TMHMM2.0 at aa 278-300 TA04250 note; Tap-24g11.q1c.cand.156 - score = 63.08 TA04255 note; Tap-24g11.q1c.C.cand.93 - score = 20.34 TA04265 note; Tap-24g11.q1c.C.cand.92 - score = 73.12 TA04270 note; Tap-24g11.q1c.C.cand.91 - score = 51.97 TA04275 note; Tap-24g11.q1c.C.cand.91 - score = 51.97 TA04280 note; Tap-24g11.q1c.cand.157 - score = 44.63 TA04285 note; Tap-24g11.q1c.cand.157 - score = 44.63 TA04290 note; Tap-24g11.q1c.C.cand.90 - score = 19.91 TA04295 note; Tap-24g11.q1c.cand.158 - score = 21.45 TA04300 note; Tap-24g11.q1c.cand.159 - score = 32.49 TA04305 note; Tap-24g11.q1c.C.cand.89 - score = 90.99 TA04320 note; Tap-24g11.q1c.cand.160 - score = 63.88 TA04325 note; Tap-24g11.q1c.C.cand.88 - score = 98.86 TA04330 note; Tap-24g11.q1c.cand.162 - score = 19.16 TA04335 note; Tap-24g11.q1c.cand.163 - score = 57.33; 7 probable transmembrane helices predicted for TA04335 by TMHMM2.0 at aa 368-390, 410-432, 447-469, 579-601, 606-623, 628-650 and 738-760 TA04340 note; Tap-24g11.q1c.cand.163 - score = 57.33 TA04345 note; 1 probable transmembrane helix predicted for TA04345 by TMHMM2.0 at aa 213-235 TA04350 1 probable transmembrane helix predicted for TA04350 by TMHMM2.0 at aa 7-29 TA04355 note; Tap-24g11.q1c.C.cand.87 - score = 121.92 TA04365 note; Tap-24g11.q1c.cand.165 - score = 83.06 TA04370 12 probable transmembrane helices predicted for TA04370 by TMHMM2.0 at aa 32-54, 64-86, 99-118, 128-150, 171-190, 195-213, 245-264, 274-296, 305-324, 339-361, 374-393 and 408-430 TA04375 note; Tap-24g11.q1c.cand.166 - score = 29.44; Signal peptide predicted for TA04375 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.161) with cleavage site probability 0.272 between residues 27 and 28 TA04380 note; Tap-24g11.q1c.C.cand.86 - score = 21.87; 4 probable transmembrane helices predicted for TA04380 by TMHMM2.0 at aa 212-234, 288-310, 339-361 and 391-413 TA04385 note; Tap-24g11.q1c.cand.167 - score = 51.49; 1 probable transmembrane helix predicted for TA04385 by TMHMM2.0 at aa 692-714 TA04390 note; Tap-24g11.q1c.cand.167 - score = 51.49; 2 probable transmembrane helices predicted for TA04390 by TMHMM2.0 at aa 5-27 and 188-210; Signal peptide predicted for TA04390 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.002) with cleavage site probability 0.438 between residues 22 and 23 TA04395 note; Tap-24g11.q1c.C.cand.85 - score = 26.90; 2 probable transmembrane helices predicted for TA04395 by TMHMM2.0 at aa 5-27 and 462-479; GPI-Anchor Signal predicted for TA04395 by DGPI v2.04, no cleavage site predicted TA04405 1 probable transmembrane helix predicted for TA04405 by TMHMM2.0 at aa 13-35 TA04410 note; Tap-24g11.q1c.C.cand.83 - score = 31.76 TA04415 note; Tap-24g11.q1c.cand.169 - score = 13.30 TA04430 note; Tap-24g11.q1c.C.cand.82 - score = 49.91; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA04430 by SignalP 2.0 HMM (Signal peptide probability 0.781, signal anchor probability 0.013) with cleavage site probability 0.664 between residues 21 and 22 TA04435 note; Tap-24g11.q1c.cand.170 - score = 16.13 TA04440 2 probable transmembrane helices predicted for TA04440 by TMHMM2.0 at aa 7-29 and 74-96 TA04450 note; Tap-24g11.q1c.cand.171 - score = 49.51; 1 probable transmembrane helix predicted for TA04450 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA04450 by SignalP 2.0 HMM (Signal peptide probability 0.785, signal anchor probability 0.190) with cleavage site probability 0.384 between residues 26 and 27 TA04455 note; Tap-24g11.q1c.cand.172 - score = 9.76 TA04460 note; Tap-24g11.q1c.cand.173 - score = 13.73; 4 probable transmembrane helices predicted for TA04460 by TMHMM2.0 at aa 22-44, 187-209, 224-246 and 291-313 TA04465 note; Tap-24g11.q1c.cand.174 - score = 16.66; 11 probable transmembrane helices predicted for TA04465 by TMHMM2.0 at aa 26-48, 77-99, 143-165, 177-199, 204-226, 239-261, 297-319, 332-350, 379-401, 421-443 and 448-470 TA04470 note; Tap-24g11.q1c.C.cand.80 - score = 26.02 TA04475 note; Tap-24g11.q1c.C.cand.79 - score = 16.04 TA04485 note TA04490 Tap-24g11.q1c.cand.176 - score = 191.21 TA04495 note; Tap-24g11.q1c.C.cand.78 - score = 25.56 TA04500 note; Tap-24g11.q1c.cand.177 - score = 34.75 TA04505 note; Tap-24g11.q1c.C.cand.77 - score = 7.03 TA04510 note; Tap-24g11.q1c.C.cand.76 - score = 37.97 TA04515 note; Tap-24g11.q1c.C.cand.76 - score = 37.97 TA04520 note; Tap-24g11.q1c.cand.178 - score = 13.36; 4 probable transmembrane helices predicted for TA04520 by TMHMM2.0 at aa 64-86, 101-123, 204-226 and 268-290 TA04525 note; Tap-24g11.q1c.cand.179 - score = 27.73 TA04530 note; Tap-24g11.q1c.C.cand.75 - score = 42.26 TA04535 note; Tap-24g11.q1c.cand.180 - score = 28.00 TA04540 note; Tap-24g11.q1c.C.cand.74 - score = 65.90 TA04545 note; Tap-24g11.q1c.C.cand.73 - score = 12.23; 1 probable transmembrane helix predicted for TA04545 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA04545 by SignalP 2.0 HMM (Signal peptide probability 0.831, signal anchor probability 0.023) with cleavage site probability 0.659 between residues 21 and 22 TA04550 note; Tap-24g11.q1c.cand.181 - score = 54.59 TA04555 note; Tap-24g11.q1c.cand.182 - score = 46.26 TA04565 note; Tap-24g11.q1c.cand.183 - score = 38.90; 10 probable transmembrane helices predicted for TA04565 by TMHMM2.0 at aa 28-50, 63-85, 89-111, 161-178, 191-213, 243-265, 285-307, 319-341, 356-378 and 411-433; GPI-Anchor Signal predicted for TA04565 by DGPI v2.04 with cleavage site probability 0.2924 near 402 TA04570 note; Tap-24g11.q1c.cand.184 - score = 21.33; 1 probable transmembrane helix predicted for TA04570 by TMHMM2.0 at aa 133-155 TA04575 note; Tap-24g11.q1c.C.cand.70 - score = 41.34 TA04580 note; Tap-24g11.q1c.C.cand.69 - score = 14.60; 2 probable transmembrane helices predicted for TA04580 by TMHMM2.0 at aa 15-37 and 95-117 TA04590 note; Tap-24g11.q1c.cand.185 - score = 25.19 TA04595 note; Tap-24g11.q1c.C.cand.68 - score = 27.94 TA04600 note; Tap-24g11.q1c.C.cand.67 - score = 33.70 TA04605 note; Tap-24g11.q1c.cand.186 - score = 8.48 TA04610 note; Tap-24g11.q1c.C.cand.66 - score = 12.23 TA04615 note; Tap-24g11.q1c.cand.187 - score = 75.08; 1 probable transmembrane helix predicted for TA04615 by TMHMM2.0 at aa 92-114 TA04620 note; Tap-24g11.q1c.C.cand.64 - score = 69.15 TA04625 note; Tap-24g11.q1c.C.cand.63 - score = 37.71 TA04630 note; Tap-24g11.q1c.C.cand.62 - score = 52.90 TA04635 note; Tap-24g11.q1c.C.cand.61 - score = 36.17; 6 probable transmembrane helices predicted for TA04635 by TMHMM2.0 at aa 126-148, 153-172, 177-199, 226-248, 253-275 and 346-363; Signal peptide predicted for TA04635 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.954 between residues 23 and 24 TA04650 note; Tap-24g11.q1c.cand.189 - score = 17.63 TA04655 note; Tap-24g11.q1c.cand.190 - score = 33.10; 2 probable transmembrane helices predicted for TA04655 by TMHMM2.0 at aa 128-150 and 157-179 TA04660 note; Tap-24g11.q1c.C.cand.60 - score = 21.17 TA04665 note; Tap-24g11.q1c.C.cand.59 - score = 83.46 TA04670 note; Tap-24g11.q1c.C.cand.58 - score = 23.52; Signal peptide predicted for TA04670 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09460 weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09460 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09465 weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09465 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09470 weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09470 by TMHMM2.0 at aa 4-22 and 203-225; Signal peptide predicted for TA09470 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19 TA09475 weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09475 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09480 weak similarity to Theileria annulata Tash1; Signal peptide predicted for TA09480 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09485 weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09485 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA09485 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA09490 weak similarity to Theileria annulata Tash1; 2 probable transmembrane helices predicted for TA09490 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA09490 by SignalP 2.0 HMM (Signal peptide probability 0.957, signal anchor probability 0.000) with cleavage site probability 0.906 between residues 18 and 19 TA09495 Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA09495 by SignalP 2.0 HMM (Signal peptide probability 0.826, signal anchor probability 0.017) with cleavage site probability 0.607 between residues 17 and 18 TA09500 Signal peptide predicted for TA09500 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04675 note; Tap-24g11.q1c.C.cand.57 - score = 33.43; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA04675 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04680 Signal peptide predicted for TA04680 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04685 note; Tap-24g11.q1c.C.cand.55 - score = 22.55; Signal peptide predicted for TA04685 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04690 note; Tap-24g11.q1c.C.cand.54 - score = 22.92; 2 probable transmembrane helices predicted for TA04690 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA04690 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04695 note; Tap-24g11.q1c.C.cand.53 - score = 23.67; 2 probable transmembrane helices predicted for TA04695 by TMHMM2.0 at aa 4-22 and 76-98; Signal peptide predicted for TA04695 by SignalP 2.0 HMM (Signal peptide probability 0.903, signal anchor probability 0.000) with cleavage site probability 0.847 between residues 18 and 19 TA04705 note; Tap-24g11.q1c.C.cand.52 - score = 27.79; Signal peptide predicted for TA04705 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.000) with cleavage site probability 0.307 between residues 19 and 20 TA04710 note; Tap-24g11.q1c.cand.191 - score = 20.35 TA04715 note; Tap-24g11.q1c.C.cand.51 - score = 257.55 TA04720 note; Tap-24g11.q1c.C.cand.51 - score = 257.55 TA04725 note; Tap-24g11.q1c.C.cand.51 - score = 257.55 TA04730 note; Tap-24g11.q1c.cand.192 - score = 20.70 TA04735 note; Tap-24g11.q1c.C.cand.50 - score = 13.84 TA04740 note; Tap-24g11.q1c.cand.193 - score = 21.90 TA04745 note; Tap-24g11.q1c.C.cand.49 - score = 12.63 TA04750 note; Tap-24g11.q1c.C.cand.48 - score = 32.59 TA04755 note; Tap-24g11.q1c.C.cand.47 - score = 22.84 TA04760 note; Tap-24g11.q1c.cand.194 - score = 16.59 TA04765 note; Tap-24g11.q1c.C.cand.46 - score = 39.19 TA04770 note; Tap-24g11.q1c.cand.195 - score = 47.36; 8 probable transmembrane helices predicted for TA04770 by TMHMM2.0 at aa 550-572, 593-615, 1269-1291, 1298-1320, 1351-1373, 1380-1402, 1417-1439 and 1446-1468 TA04775 note; Tap-24g11.q1c.C.cand.45 - score = 35.92 TA04780 note; Tap-24g11.q1c.cand.196 - score = 7.75 TA04785 5 probable transmembrane helices predicted for TA04785 by TMHMM2.0 at aa 4-21, 28-50, 89-111, 118-137 and 160-182; Signal peptide predicted for TA04785 by SignalP 2.0 HMM (Signal peptide probability 0.906, signal anchor probability 0.094) with cleavage site probability 0.190 between residues 49 and 50; GPI-Anchor Signal predicted for TA04785 by DGPI v2.04 with cleavage site probability 0.59159994 near 156 TA04790 note; Tap-24g11.q1c.cand.198 - score = 98.17; 3 probable transmembrane helices predicted for TA04790 by TMHMM2.0 at aa 12-34, 220-242 and 357-379 TA04795 note; Tap-24g11.q1c.cand.199 - score = 20.18; Signal peptide predicted for TA04795 by SignalP 2.0 HMM (Signal peptide probability 0.912, signal anchor probability 0.003) with cleavage site probability 0.360 between residues 16 and 17 TA04800 note; Tap-24g11.q1c.cand.199 - score = 20.18 TA04810 note; Tap-24g11.q1c.C.cand.41 - score = 22.29; 1 probable transmembrane helix predicted for TA04810 by TMHMM2.0 at aa 112-134 TA04815 note; Tap-24g11.q1c.cand.200 - score = 36.74; 2 probable transmembrane helices predicted for TA04815 by TMHMM2.0 at aa 576-595 and 683-705 TA04820 note; Tap-24g11.q1c.C.cand.40 - score = 48.41; 3 probable transmembrane helices predicted for TA04820 by TMHMM2.0 at aa 33-55, 411-433 and 459-481 TA04825 5 probable transmembrane helices predicted for TA04825 by TMHMM2.0 at aa 2-21, 65-87, 147-169, 173-192 and 357-379; Signal peptide predicted for TA04825 by SignalP 2.0 HMM (Signal peptide probability 0.837, signal anchor probability 0.000) with cleavage site probability 0.244 between residues 15 and 16; GPI-Anchor Signal predicted for TA04825 by DGPI v2.04 with cleavage site probability 2.1199 near 1096 TA04830 note; Tap-24g11.q1c.C.cand.39 - score = 25.71; 4 probable transmembrane helices predicted for TA04830 by TMHMM2.0 at aa 5-22, 52-71, 83-105 and 120-142; Signal peptide predicted for TA04830 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.110) with cleavage site probability 0.340 between residues 21 and 22 TA04835 note; Tap-24g11.q1c.C.cand.38 - score = 10.66; 1 probable transmembrane helix predicted for TA04835 by TMHMM2.0 at aa 7-24 TA04840 note; Tap-24g11.q1c.cand.203 - score = 34.96 TA04855 note TA04865 note; Tap-24g11.q1c.cand.204 - score = 28.31 TA04870 note; Tap-24g11.q1c.cand.205 - score = 95.22 TA04875 note; Tap-24g11.q1c.C.cand.35 - score = 97.69 TA04880 note; Tap-24g11.q1c.cand.206 - score = 15.20 TA04885 note; Tap-24g11.q1c.C.cand.34 - score = 23.03 TA04890 note; Tap-24g11.q1c.cand.207 - score = 54.05 TA04895 note; Tap-24g11.q1c.cand.208 - score = 21.89 TA04905 note; Tap-24g11.q1c.cand.209 - score = 83.58 TA04920 note; Tap-24g11.q1c.C.cand.32 - score = 11.41 TA04925 Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA04925 by TMHMM2.0 at aa 7-26 and 113-132; Signal peptide predicted for TA04925 by SignalP 2.0 HMM (Signal peptide probability 0.842, signal anchor probability 0.099) with cleavage site probability 0.597 between residues 23 and 24 TA04930 note; Tap-24g11.q1c.C.cand.31 - score = 19.33 TA04935 note; Tap-24g11.q1c.cand.210 - score = 37.61; 1 probable transmembrane helix predicted for TA04935 by TMHMM2.0 at aa 7-29; Signal anchor predicted for TA04935 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.997) with cleavage site probability 0.001 between residues 35 and 36 TA04940 note; Tap-24g11.q1c.C.cand.30 - score = 45.99; 1 probable transmembrane helix predicted for TA04940 by TMHMM2.0 at aa 7-29 TA04945 note; Tap-24g11.q1c.cand.211 - score = 27.95 TA04950 note; Tap-24g11.q1c.C.cand.29 - score = 11.83; Apicoplast targetting peptide predicted by the PlasmoAP tool; 4 probable transmembrane helices predicted for TA04950 by TMHMM2.0 at aa 29-51, 61-83, 210-232 and 265-287; Signal anchor predicted for TA04950 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.911) with cleavage site probability 0.000 between residues 44 and 45 TA04955 note; Tap-24g11.q1c.C.cand.28 - score = 73.03 TA04960 note; Tap-24g11.q1c.C.cand.27 - score = 32.48; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA04960 by TMHMM2.0 at aa 7-26 and 384-406; Signal peptide predicted for TA04960 by SignalP 2.0 HMM (Signal peptide probability 0.704, signal anchor probability 0.182) with cleavage site probability 0.283 between residues 29 and 30 TA04965 note; Tap-24g11.q1c.C.cand.26 - score = 21.31; 5 probable transmembrane helices predicted for TA04965 by TMHMM2.0 at aa 5-22, 79-96, 227-249, 254-276 and 286-305 TA04980 note; Tap-24g11.q1c.C.cand.25 - score = 20.06 TA04985 note; Tap-24g11.q1c.C.cand.24 - score = 35.44 TA04995 note; Tap-24g11.q1c.cand.212 - score = 63.08 TA05000 note; Tap-24g11.q1c.cand.212 - score = 63.08; Signal peptide predicted for TA05000 by SignalP 2.0 HMM (Signal peptide probability 0.772, signal anchor probability 0.167) with cleavage site probability 0.526 between residues 22 and 23 TA05005 note; Tap-24g11.q1c.cand.213 - score = 28.01 TA05010 note; Tap-24g11.q1c.cand.214 - score = 52.27; 1 probable transmembrane helix predicted for TA05010 by TMHMM2.0 at aa 488-510 TA05015 note; Tap-24g11.q1c.C.cand.22 - score = 14.39; Signal peptide predicted for TA05015 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18 TA05020 note; Tap-24g11.q1c.C.cand.21 - score = 50.90 TA05025 note; Tap-24g11.q1c.C.cand.20 - score = 20.91; 2 probable transmembrane helices predicted for TA05025 by TMHMM2.0 at aa 133-155 and 193-215; Signal peptide predicted for TA05025 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.982 between residues 17 and 18 TA05030 note; Tap-24g11.q1c.C.cand.19 - score = 31.93 TA05035 note; Tap-24g11.q1c.C.cand.18 - score = 12.50 TA05040 note; Tap-24g11.q1c.C.cand.17 - score = 22.47 TA05045 note; Tap-24g11.q1c.C.cand.16 - score = 49.54 TA05050 note; Tap-24g11.q1c.cand.216 - score = 8.94 TA05055 note; Tap-24g11.q1c.cand.217 - score = 55.97 TA05060 note; Tap-24g11.q1c.C.cand.15 - score = 60.19 TA05065 note; Tap-24g11.q1c.C.cand.14 - score = 34.60 TA05070 note; Tap-24g11.q1c.C.cand.13 - score = 20.38; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA05070 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.001) with cleavage site probability 0.735 between residues 23 and 24 TA05075 note; Tap-24g11.q1c.C.cand.12 - score = 9.99 TA05085 note; Tap-24g11.q1c.cand.218 - score = 80.90 TA05090 note; Tap-24g11.q1c.cand.219 - score = 102.24 TA05095 note; Tap-24g11.q1c.cand.219 - score = 102.24 TA05100 note; Tap-24g11.q1c.C.cand.11 - score = 19.33; 8 probable transmembrane helices predicted for TA05100 by TMHMM2.0 at aa 46-68, 78-100, 121-143, 165-184, 191-213, 228-250, 274-296 and 330-349 TA05105 note; Tap-24g11.q1c.cand.220 - score = 25.33 TA05110 note; Tap-24g11.q1c.cand.221 - score = 90.52 TA05115 note; Tap-24g11.q1c.cand.221 - score = 90.52; 1 probable transmembrane helix predicted for TA05115 by TMHMM2.0 at aa 497-519 TA05120 note; Tap-24g11.q1c.C.cand.10 - score = 13.89 TA05125 note; Tap-24g11.q1c.cand.222 - score = 36.00; 11 probable transmembrane helices predicted for TA05125 by TMHMM2.0 at aa 33-55, 99-121, 125-144, 151-173, 183-205, 218-240, 300-322, 366-388, 392-414, 427-449 and 459-481; Signal anchor predicted for TA05125 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.740) with cleavage site probability 0.000 between residues -1 and 0 TA05130 note; Tap-24g11.q1c.C.cand.9 - score = 16.57 TA05145 note; Tap-24g11.q1c.cand.223 - score = 38.75; 10 probable transmembrane helices predicted for TA05145 by TMHMM2.0 at aa 21-43, 84-106, 113-132, 142-164, 171-193, 203-225, 275-292, 332-354, 392-414 and 429-451; Signal anchor predicted for TA05145 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.871) with cleavage site probability 0.027 between residues 42 and 43 TA05150 note; Tap-24g11.q1c.cand.224 - score = 21.90; 7 probable transmembrane helices predicted for TA05150 by TMHMM2.0 at aa 61-83, 98-120, 141-163, 178-200, 354-372, 382-401 and 408-430 TA05155 note; Tap-24g11.q1c.cand.225 - score = 27.34; 11 probable transmembrane helices predicted for TA05155 by TMHMM2.0 at aa 45-67, 132-154, 161-183, 193-215, 227-249, 312-334, 347-369, 379-398, 405-422, 432-454 and 466-488 TA05160 note; Tap-24g11.q1c.cand.226 - score = 24.89; 12 probable transmembrane helices predicted for TA05160 by TMHMM2.0 at aa 70-92, 136-158, 163-180, 190-212, 219-238, 253-275, 339-361, 384-406, 413-430, 435-457, 470-492 and 507-529 TA05165 note; Tap-24g11.q1c.cand.227 - score = 25.93 TA05170 note; 3 probable transmembrane helices predicted for TA05170 by TMHMM2.0 at aa 96-118, 362-384 and 394-416 TA05175 note; Tap-24g11.q1c.cand.229 - score = 70.31; 1 probable transmembrane helix predicted for TA05175 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA05175 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.000) with cleavage site probability 0.355 between residues 22 and 23 TA05180 note; Tap-24g11.q1c.C.cand.8 - score = 36.16 TA05185 note; Tap-24g11.q1c.C.cand.8 - score = 36.16 TA05190 note; Tap-24g11.q1c.cand.230 - score = 68.11; 2 probable transmembrane helices predicted for TA05190 by TMHMM2.0 at aa 287-309 and 541-563 TA05200 note; Tap-24g11.q1c.C.cand.7 - score = 21.71 TA05205 note; Tap-24g11.q1c.C.cand.6 - score = 10.99 TA05210 note; Tap-24g11.q1c.C.cand.5 - score = 69.13 TA05215 1 probable transmembrane helix predicted for TA05215 by TMHMM2.0 at aa 1323-1345 TA05220 note; Tap-24g11.q1c.C.cand.4 - score = 48.18 TA05225 note; Tap-24g11.q1c.C.cand.3 - score = 19.45 TA05230 note; Tap-24g11.q1c.cand.233 - score = 40.21; 8 probable transmembrane helices predicted for TA05230 by TMHMM2.0 at aa 685-707, 1031-1053, 1068-1085, 1105-1124, 1134-1156, 1161-1183, 1208-1230 and 1243-1265 TA05235 note; Tap-24g11.q1c.cand.234 - score = 15.17; 5 probable transmembrane helices predicted for TA05235 by TMHMM2.0 at aa 24-46, 117-139, 149-171, 214-236 and 270-292; GPI-Anchor Signal predicted for TA05235 by DGPI v2.04, no cleavage site predicted TA05240 note; Tap-24g11.q1c.cand.235 - score = 9.55; 4 probable transmembrane helices predicted for TA05240 by TMHMM2.0 at aa 45-67, 88-110, 120-142 and 203-225; Signal peptide predicted for TA05240 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.024) with cleavage site probability 0.356 between residues 15 and 16 TA05245 2 probable transmembrane helices predicted for TA05245 by TMHMM2.0 at aa 26-45 and 55-77; GPI-Anchor Signal predicted for TA05245 by DGPI v2.04, no cleavage site predicted TA05250 2 probable transmembrane helices predicted for TA05250 by TMHMM2.0 at aa 327-346 and 359-378 TA05255 3 probable transmembrane helices predicted for TA05255 by TMHMM2.0 at aa 20-42, 88-110 and 125-147; Signal peptide predicted for TA05255 by SignalP 2.0 HMM (Signal peptide probability 0.663, signal anchor probability 0.033) with cleavage site probability 0.361 between residues 30 and 31; GPI-Anchor Signal predicted for TA05255 by DGPI v2.04, no cleavage site predicted TA17575 Signal peptide predicted for TA17575 by SignalP 2.0 HMM (Signal peptide probability 0.996, signal anchor probability 0.001) with cleavage site probability 0.492 between residues 17 and 18; GPI-Anchor Signal predicted for TA17575 by DGPI v2.04, no cleavage site predicted TA17585 9 probable transmembrane helices predicted for TA17585 by TMHMM2.0 at aa 20-39, 112-134, 144-166, 206-228, 340-362, 375-397, 420-442, 462-484 and 489-508; Signal anchor predicted for TA17585 by SignalP 2.0 HMM (Signal peptide probability 0.010, signal anchor probability 0.618) with cleavage site probability 0.002 between residues 41 and 42 TA17590 Contains ankyrin repeat elements and significant hit (6.5e-46)to Pfam:hitone deacetylase domain TA17600 Signal peptide predicted for TA17600 by SignalP 2.0 HMM (Signal peptide probability 0.892, signal anchor probability 0.002) with cleavage site probability 0.832 between residues 25 and 26 TA17610 1 probable transmembrane helix predicted for TA17610 by TMHMM2.0 at aa 29-51; Signal anchor predicted for TA17610 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.834) with cleavage site probability 0.000 between residues 52 and 53 TA17615 Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA17615 by TMHMM2.0 at aa 188-210 TA17780 2 probable transmembrane helices predicted for TA17780 by TMHMM2.0 at aa 678-700 and 927-949 TA17885 Signal peptide predicted for TA17885 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.810 between residues 16 and 17 TA17945 Signal anchor predicted for TA17945 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.656) with cleavage site probability 0.001 between residues 21 and 22 TA18160 mostly similar to cobalamin synthesis protein from several bacterial origin TA18480 8 probable transmembrane helices predicted for TA18480 by TMHMM2.0 at aa 89-111, 173-192, 199-216, 246-268, 281-303, 346-363, 376-398 and 402-424 TA18490 Pfam match to MAM33 family protein TA18495 Significant similarities to midasin-related proteins TA18500 Signal peptide predicted for TA18500 by SignalP 2.0 HMM (Signal peptide probability 0.992, signal anchor probability 0.000) with cleavage site probability 0.324 between residues 15 and 16 TA18505 Signal peptide predicted for TA18505 by SignalP 2.0 HMM (Signal peptide probability 0.802, signal anchor probability 0.000) with cleavage site probability 0.551 between residues 21 and 22 TA18515 Contains putative TPR repeats; significant similarities to stress-induced phosproteins from several organisms TA18535 Signal peptide predicted for TA18535 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.983 between residues 21 and 22 TA18540 Signal peptide predicted for TA18540 by SignalP 2.0 HMM (Signal peptide probability 0.763, signal anchor probability 0.004) with cleavage site probability 0.672 between residues 18 and 19 TA18545 11 probable transmembrane helices predicted for TA18545 by TMHMM2.0 at aa 15-37, 57-79, 89-111, 118-140, 150-172, 184-206, 236-258, 271-293, 308-330, 343-365 and 380-402; Signal peptide predicted for TA18545 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.129) with cleavage site probability 0.400 between residues 35 and 36 TA18560 note TA18595 2 probable transmembrane helices predicted for TA18595 by TMHMM2.0 at aa 90-112 and 211-233 TA18600 Contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA18600 by TMHMM2.0 at aa 80-102 TA18605 Contains 8 putative transmembrane domain; 8 probable transmembrane helices predicted for TA18605 by TMHMM2.0 at aa 17-35, 50-69, 90-112, 156-178, 223-242, 247-266, 379-401 and 406-428 TA18610 Contains significant homology to CSP SMART domain TA18620 Significant Pfam match to sec1 family domain TA18625 Contains a putative signal sequence; 1 probable transmembrane helix predicted for TA18625 by TMHMM2.0 at aa 34-56; Signal anchor predicted for TA18625 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.992) with cleavage site probability 0.001 between residues 47 and 48 TA18635 4 probable transmembrane helices predicted for TA18635 by TMHMM2.0 at aa 4-26, 82-104, 109-126 and 146-163; GPI-Anchor Signal predicted for TA18635 by DGPI v2.04, no cleavage site predicted TA18645 Contains putative transmembrane domains; 2 probable transmembrane helices predicted for TA18645 by TMHMM2.0 at aa 131-153 and 160-182 TA18650 1 probable transmembrane helix predicted for TA18650 by TMHMM2.0 at aa 279-301 TA18655 Contains 10 putative transmembrane domains; 10 probable transmembrane helices predicted for TA18655 by TMHMM2.0 at aa 20-42, 119-141, 151-173, 213-235, 264-286, 299-318, 387-409, 429-451, 461-483 and 550-572 TA18660 Contains putative WD04 domains TA18665 The N-terminal part is conserved with a few mammlian proteins; contains a putative transmembrane domain; 1 probable transmembrane helix predicted for TA18665 by TMHMM2.0 at aa 102-124 TA18670 Conatins one putative transmembrane domain; 1 probable transmembrane helix predicted for TA18670 by TMHMM2.0 at aa 22-44 TA18675 Contains 10 putative transmembrane domains; 11 probable transmembrane helices predicted for TA18675 by TMHMM2.0 at aa 22-44, 121-143, 153-175, 215-237, 267-289, 302-321, 387-409, 429-451, 461-478, 536-555 and 559-578 TA18680 note TA18685 hypothetical protein, conserved TA18700 Significant hit to Pfam New1 domain; 4 probable transmembrane helices predicted for TA18700 by TMHMM2.0 at aa 17-39, 49-71, 158-180 and 200-222; Signal anchor predicted for TA18700 by SignalP 2.0 HMM (Signal peptide probability 0.062, signal anchor probability 0.937) with cleavage site probability 0.046 between residues 34 and 35 TA18705 Contains a putative signal sequence TA18710 Significant hit to Pfam DnaJ domain TA18715 2 probable transmembrane helices predicted for TA18715 by TMHMM2.0 at aa 175-197 and 326-348 TA18745 Signal peptide predicted for TA18745 by SignalP 2.0 HMM (Signal peptide probability 0.833, signal anchor probability 0.000) with cleavage site probability 0.337 between residues 19 and 20 TA18750 Contains a putative signal peptide; 1 probable transmembrane helix predicted for TA18750 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA18750 by SignalP 2.0 HMM (Signal peptide probability 0.650, signal anchor probability 0.000) with cleavage site probability 0.469 between residues 19 and 20 TA18755 Contains a putative signal sequence; Signal peptide predicted for TA18755 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.424 between residues 20 and 21 TA18760 Contains a putative signal sequence; Signal peptide predicted for TA18760 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.003) with cleavage site probability 0.423 between residues 20 and 21 TA18765 Contains a putative signal sequence; Signal peptide predicted for TA18765 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.789 between residues 15 and 16 TA18770 Contains a putative signal sequence; Signal peptide predicted for TA18770 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.400 between residues 16 and 17 TA18790 Significant Pfam & SMART hit to DEXDc2 & HELICc2 domains TA18815 Shows strong hit to SMART & Pfam rrm domain TA18835 2 probable transmembrane helices predicted for TA18835 by TMHMM2.0 at aa 10-29 and 42-64; Signal anchor predicted for TA18835 by SignalP 2.0 HMM (Signal peptide probability 0.034, signal anchor probability 0.954) with cleavage site probability 0.014 between residues 30 and 31 TA18840 6 probable transmembrane helices predicted for TA18840 by TMHMM2.0 at aa 79-101, 111-130, 151-173, 188-210, 222-244 and 248-270 TA17625 1 probable transmembrane helix predicted for TA17625 by TMHMM2.0 at aa 195-214 TA17635 7 probable transmembrane helices predicted for TA17635 by TMHMM2.0 at aa 29-48, 53-72, 130-152, 156-173, 185-207, 217-236 and 243-262; Signal anchor predicted for TA17635 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.995) with cleavage site probability 0.000 between residues 51 and 52 TA17655 Signal peptide predicted for TA17655 by SignalP 2.0 HMM (Signal peptide probability 0.763, signal anchor probability 0.000) with cleavage site probability 0.476 between residues 18 and 19 TA17660 Strong Pfam hits to pyr_redox (1.5e-14) and Rieske (3.4e-50) domains TA17670 Signal peptide predicted for TA17670 by SignalP 2.0 HMM (Signal peptide probability 0.965, signal anchor probability 0.000) with cleavage site probability 0.919 between residues 17 and 18 TA17680 Pfam match to UCH-1 and UCH-2 domains TA17685 Pfam hit to asp domain (9.6e-07) TA17695 Contains a putative signal sequence; 1 probable transmembrane helix predicted for TA17695 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA17695 by SignalP 2.0 HMM (Signal peptide probability 0.045, signal anchor probability 0.955) with cleavage site probability 0.023 between residues 34 and 35 TA17700 Contains 4 putative transmembrane domains; 4 probable transmembrane helices predicted for TA17700 by TMHMM2.0 at aa 71-93, 98-120, 132-151 and 155-177 TA17705 Signal peptide predicted for TA17705 by SignalP 2.0 HMM (Signal peptide probability 0.972, signal anchor probability 0.000) with cleavage site probability 0.866 between residues 18 and 19 TA17725 Pfam hit (1.4e-04) to Acetyltransferase (GNAT) family domain; contains 1 putative transmembrane domain; 1 probable transmembrane helix predicted for TA17725 by TMHMM2.0 at aa 5-27 TA17740 6 probable transmembrane helices predicted for TA17740 by TMHMM2.0 at aa 34-53, 75-97, 118-140, 160-182, 194-213 and 228-247; Signal anchor predicted for TA17740 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.990) with cleavage site probability 0.001 between residues 53 and 54 TA17745 6 probable transmembrane helices predicted for TA17745 by TMHMM2.0 at aa 21-43, 53-72, 110-132, 142-164, 207-229 and 251-273; Signal anchor predicted for TA17745 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.976) with cleavage site probability 0.000 between residues 43 and 44 TA17750 Contains 3 putative rna-binding domains TA17785 Pfam hit (1.00e-26) to Hamp1_like domain TA17790 Exon II is uncertain TA17810 Pfam hit to protein kinase domain(6.7e-06) TA17825 Significant SMART hit (2.2e-43) to S_TKc domain and Pfam hit (5.3e-41) to pkinase domain TA17835 Significant Pfam hit (6.00e-34)to AAA family ATPase domain TA17855 Pfam hit (2.2e-22) to Met10+-like protein TA17865 9 probable transmembrane helices predicted for TA17865 by TMHMM2.0 at aa 43-65, 119-141, 145-167, 174-196, 211-233, 291-313, 362-384, 405-424 and 434-456 TA17880 SMART match (5.53e-07) to SANT domain and Pfam match (1.56e-06) to DNA-binding domain TA17915 1 probable transmembrane helix predicted for TA17915 by TMHMM2.0 at aa 433-452 TA17920 Contains one putative transmembrane domain; 1 probable transmembrane helix predicted for TA17920 by TMHMM2.0 at aa 212-234 TA17950 Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA17950 by TMHMM2.0 at aa 112-134 and 144-166 TA17955 3 probable transmembrane helices predicted for TA17955 by TMHMM2.0 at aa 4-26, 39-58 and 63-85; Signal peptide predicted for TA17955 by SignalP 2.0 HMM (Signal peptide probability 0.940, signal anchor probability 0.025) with cleavage site probability 0.555 between residues 21 and 22 TA17960 1 probable transmembrane helix predicted for TA17960 by TMHMM2.0 at aa 256-278 TA17995 Pfam hit (1.0e-10) to zf-Tim10_DDP domain TA18000 Contains a putative signal peptide; shows match (9.6e-09) to Pfam rrm domain TA18005 Shows weak similarity (9.8e-01) to Pfam abhydrolase domain; could function as a possible enzyme; some similarity to lysophospholipases from P. falciparum malaria; not enough evidence to determine the nature of this gene product TA18010 Contains 10 putative transmembrane domains; 10 probable transmembrane helices predicted for TA18010 by TMHMM2.0 at aa 38-60, 82-104, 113-135, 145-164, 171-193, 208-230, 271-293, 306-328, 341-363 and 416-438 TA18060 11 probable transmembrane helices predicted for TA18060 by TMHMM2.0 at aa 27-49, 70-92, 102-124, 131-153, 213-235, 255-277, 302-324, 337-359, 1769-1787, 1895-1917 and 1932-1954; Signal anchor predicted for TA18060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50 TA18070 11 probable transmembrane helices predicted for TA18070 by TMHMM2.0 at aa 27-49, 70-92, 102-124, 131-153, 213-235, 255-277, 302-324, 337-359, 1097-1115, 1223-1245 and 1260-1282; Signal anchor predicted for TA18070 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.996) with cleavage site probability 0.000 between residues 49 and 50 TA18080 Weak Pfam hit(3.2e-04) to Rhomboid family domain; contains a putative signal peptide; 4 probable transmembrane helices predicted for TA18080 by TMHMM2.0 at aa 228-250, 352-371, 375-397 and 404-421; Signal peptide predicted for TA18080 by SignalP 2.0 HMM (Signal peptide probability 0.978, signal anchor probability 0.000) with cleavage site probability 0.382 between residues 19 and 20; GPI-Anchor Signal predicted for TA18080 by DGPI v2.04, no cleavage site predicted TA18095 Weak Pfam hit(1.3e-03) to Clathrein_adaptor complex side chain TA18130 Contains putative signal peptide; contains 6 putative transmembrane domains; Shows moderate Pfam hit (1.2e-08) to Zip transporter domain; 8 probable transmembrane helices predicted for TA18130 by TMHMM2.0 at aa 4-26, 47-69, 89-111, 178-200, 215-237, 244-266, 272-294 and 307-329 TA18150 1 probable transmembrane helix predicted for TA18150 by TMHMM2.0 at aa 12-34 TA18155 Pfam hit (3.1e-09) to CAAX amino terminal protease family domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 7 probable transmembrane helices predicted for TA18155 by TMHMM2.0 at aa 10-32, 176-198, 213-235, 304-326, 346-365, 460-482 and 497-519; Signal peptide predicted for TA18155 by SignalP 2.0 HMM (Signal peptide probability 0.731, signal anchor probability 0.116) with cleavage site probability 0.386 between residues 26 and 27 TA18200 Signal anchor predicted for TA18200 by SignalP 2.0 HMM (Signal peptide probability 0.177, signal anchor probability 0.764) with cleavage site probability 0.103 between residues 22 and 23 TA18210 Contains putative signal peptide; contains 11 putative transmembrane domains; 12 probable transmembrane helices predicted for TA18210 by TMHMM2.0 at aa 25-47, 76-95, 102-124, 129-151, 216-238, 265-287, 308-330, 345-367, 549-571, 1348-1366, 1474-1496 and 1511-1533; Signal anchor predicted for TA18210 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 49 and 50 TA18220 Significant Pfam hit (5.8e-27) to Patatin-like phospholipase domain; contains putative signal peptide TA18240 Similar to several prokaryotic ATP-dependent RNA helicases TA18250 Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18250 by TMHMM2.0 at aa 50-72 and 79-98 TA18255 Moderate Pfam hit (5.7e-09) cytidine deaminase domain TA18285 Shows Pfam hit (3.56e-05) to MACPF domain at the C-terminal end; the first 13 exons of the protein could be part of a separate hypothetical protein TA18290 4 probable transmembrane helices predicted for TA18290 by TMHMM2.0 at aa 109-131, 231-248, 311-333 and 354-373 TA18295 Signal peptide predicted for TA18295 by SignalP 2.0 HMM (Signal peptide probability 0.955, signal anchor probability 0.000) with cleavage site probability 0.883 between residues 19 and 20 TA18300 2 probable transmembrane helices predicted for TA18300 by TMHMM2.0 at aa 28-50 and 155-177; Signal anchor predicted for TA18300 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.681) with cleavage site probability 0.000 between residues 46 and 47 TA18325 hit (7.79e-01) to MACPF domain TA18330 Putative signal peptide present TA18363 Signal peptide predicted for TA18363 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.000) with cleavage site probability 0.523 between residues 21 and 22 TA18390 3 probable transmembrane helices predicted for TA18390 by TMHMM2.0 at aa 1009-1031, 1090-1112 and 1116-1138 TA18395 Contains 7 possible transmembrane domains; 7 probable transmembrane helices predicted for TA18395 by TMHMM2.0 at aa 1296-1318, 1345-1367, 1377-1394, 1420-1442, 1457-1476, 1496-1518 and 1798-1817 TA18405 Contains possible KOW-like repeat elements TA18420 Contains 1 putative transmembrane domain; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA18420 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA18420 by SignalP 2.0 HMM (Signal peptide probability 0.786, signal anchor probability 0.112) with cleavage site probability 0.435 between residues 29 and 30 TA18430 2 probable transmembrane helices predicted for TA18430 by TMHMM2.0 at aa 21-43 and 63-80; GPI-Anchor Signal predicted for TA18430 by DGPI v2.04, no cleavage site predicted TA18435 Contains 3 putative transmembrane domains; 3 probable transmembrane helices predicted for TA18435 by TMHMM2.0 at aa 692-714, 946-968 and 1017-1039 TA18440 3 probable transmembrane helices predicted for TA18440 by TMHMM2.0 at aa 866-888, 931-953 and 2259-2281 TA18450 Contains 12 putative transmembrane domains; Apicoplast targetting peptide predicted by the PlasmoAP tool; 12 probable transmembrane helices predicted for TA18450 by TMHMM2.0 at aa 10-29, 160-177, 182-204, 216-234, 249-268, 275-297, 338-360, 517-536, 546-568, 602-624, 653-675 and 716-738; Signal anchor predicted for TA18450 by SignalP 2.0 HMM (Signal peptide probability 0.029, signal anchor probability 0.970) with cleavage site probability 0.012 between residues 27 and 28 TA18460 Contains 2 putative transmembrane domains; 2 probable transmembrane helices predicted for TA18460 by TMHMM2.0 at aa 315-337 and 358-380 TA18475 Significant Pfam hit (1.1e-31) to Histone-like transcription factor domain TA17470 SMART 2 transmembrane domains at aa 24-46 and 66-85; 2 probable transmembrane helices predicted for TA17470 by TMHMM2.0 at aa 25-47 and 62-84 TA17465 Tap-921d01.p1c.C.cand.1 - score = 20.16; SMART pfam:Peptidase_C13 (PF01650) at aa 25-377, E()=5.20e-10 TA17460 note; Tap-921d01.p1c.C.cand.2 - score = 47.74 TA17455 note; Tap-921d01.p1c.C.cand.3 - score = 20.45 TA17450 note; Tap-921d01.p1c.C.cand.4 - score = 32.18; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA17450 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17450 by SignalP 2.0 HMM (Signal peptide probability 0.640, signal anchor probability 0.323) with cleavage site probability 0.265 between residues 23 and 24 TA17445 note; Tap-921d01.p1c.cand.12 - score = 49.89; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17445 by TMHMM2.0 at aa 7-26; Signal anchor predicted for TA17445 by SignalP 2.0 HMM (Signal peptide probability 0.238, signal anchor probability 0.762) with cleavage site probability 0.096 between residues 23 and 24 TA17440 SMART 2 transmembrane domains at aa 20-42 and 63-85; 2 probable transmembrane helices predicted for TA17440 by TMHMM2.0 at aa 20-42 and 63-85 TA17435 note; Tap-921d01.p1c.cand.12 - score = 49.89 TA17430 note; Tap-921d01.p1c.C.cand.5 - score = 17.39 TA17425 7 probable transmembrane helices predicted for TA17425 by TMHMM2.0 at aa 22-44, 110-129, 134-156, 232-254, 274-296, 402-424 and 429-451; Signal anchor predicted for TA17425 by SignalP 2.0 HMM (Signal peptide probability 0.251, signal anchor probability 0.664) with cleavage site probability 0.120 between residues 42 and 43 TA17420 Tap-921d01.p1c.C.cand.6 - score = 18.86; SMART pfam:vATP-synth_E (PF01991) at aa 16-219, E()=2.30e-24 TA17415 note; Tap-921d01.p1c.cand.10 - score = 12.49 TA17410 SMART 3 transmembrane domains at aa 60-78, 95-117 and 144-166; 4 probable transmembrane helices predicted for TA17410 by TMHMM2.0 at aa 28-50, 60-78, 95-117 and 144-166; Signal anchor predicted for TA17410 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.994) with cleavage site probability 0.000 between residues 40 and 41 TA17405 note; Tap-921d01.p1c.cand.9 - score = 28.63; Signal peptide predicted for TA17405 by SignalP 2.0 HMM (Signal peptide probability 0.855, signal anchor probability 0.122) with cleavage site probability 0.567 between residues 29 and 30 TA17400 note; SMART pfam:polyprenyl_synt (PF00348) at aa 46-329, E()=2.30e-34; 1 probable transmembrane helix predicted for TA17400 by TMHMM2.0 at aa 132-154 TA17395 note; Tap-921d01.p1c.cand.8 - score = 17.56; SMART HTH_XRE (SM0530) at aa 80-135, E()=1.04e-07 TA17390 note TA17385 note; Tap-921d01.p1c.cand.6 - score = 16.14 TA17380 note; Tap-921d01.p1c.C.cand.8 - score = 18.35; SMART pfam:Ribosomal_S7 domain (PF00177) at aa 40-192, E()=1.30e-59 TA17375 note; Tap-921d01.p1c.cand.5 - score = 51.54; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17375 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17375 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.004) with cleavage site probability 0.950 between residues 20 and 21 TA17370 note; Tap-921d01.p1c.cand.4 - score = 52.29; SMART 10 transmembrane domains at aa 20-42, 55-77, 83-102, 107-129, 149-171, 192-210, 274-296, 972-994, 1004-1026 and 1033-1055; 10 probable transmembrane helices predicted for TA17370 by TMHMM2.0 at aa 20-42, 55-77, 83-102, 107-129, 149-171, 192-210, 274-296, 972-994, 1004-1026 and 1033-1055 TA17365 note; Tap-921d01.p1c.cand.3 - score = 54.73; SMART 6 transmembrane domains at aa 141-160, 175-197, 286-308, 323-345, 392-414 and 445-467; 2 AAA (SM0382) domains at aa 549-754, E()=6.45e-01; 1265-1443, E()=2.45e-02; pfam:ABC_membrane (PF00664) at aa 848-1136, E()=9.70e-02; 11 probable transmembrane helices predicted for TA17365 by TMHMM2.0 at aa 141-160, 175-197, 286-308, 323-345, 392-414, 445-467, 838-860, 901-923, 977-999, 1003-1025 and 1077-1099 TA05590 note; Tap299b01.p1c.cand.1 - score = 55.75; SMART 6 transmembrane domains at aa 140-162, 175-197, 289-311, 318-340, 397-419 and 440-462; 2 AAA (SM0382) domains at aa 549-748, E()=4.68e-01; 1264-1442, E()=5.39e-02; pfam:ABC_membrane (PF00664) at aa 840-1135, E()=3.90e-02; 12 probable transmembrane helices predicted for TA05590 by TMHMM2.0 at aa 140-162, 175-197, 289-311, 318-340, 397-419, 440-462, 579-601, 837-859, 900-922, 976-998, 1002-1021 and 1088-1107 TA05580 note; Tap299b01.p1c.C.cand.3 - score = 38.03 TA05575 note; Tap299b01.p1c.C.cand.3 - score = 38.03 TA05570 note; Tap299b01.p1c.C.cand.4 - score = 35.14; Signal peptide predicted for TA05570 by SignalP 2.0 HMM (Signal peptide probability 0.738, signal anchor probability 0.077) with cleavage site probability 0.648 between residues 21 and 22 TA05565 Tap299b01.p1c.C.cand.4 - score = 35.14; Signal peptide predicted for TA05565 by SignalP 2.0 HMM (Signal peptide probability 0.830, signal anchor probability 0.000) with cleavage site probability 0.810 between residues 21 and 22 TA05560 note; Tap299b01.p1c.C.cand.5 - score = 31.36; Signal anchor predicted for TA05560 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25 TA05555 note; Tap299b01.p1c.C.cand.5 - score = 31.36; Signal anchor predicted for TA05555 by SignalP 2.0 HMM (Signal peptide probability 0.189, signal anchor probability 0.701) with cleavage site probability 0.120 between residues 24 and 25 TA05550 note; Tap299b01.p1c.C.cand.6 - score = 16.17; Signal peptide predicted for TA05550 by SignalP 2.0 HMM (Signal peptide probability 0.710, signal anchor probability 0.000) with cleavage site probability 0.642 between residues 22 and 23 TA05545 note; Tap299b01.p1c.C.cand.7 - score = 33.48 TA05540 note; Tap299b01.p1c.C.cand.8 - score = 11.92; Signal peptide predicted for TA05540 by SignalP 2.0 HMM (Signal peptide probability 0.893, signal anchor probability 0.000) with cleavage site probability 0.809 between residues 18 and 19 TA05535 Tap299b01.p1c.C.cand.9 - score = 25.85 TA05530 Tap299b01.p1c.C.cand.10 - score = 187.97; Signal peptide predicted for TA05530 by SignalP 2.0 HMM (Signal peptide probability 0.980, signal anchor probability 0.000) with cleavage site probability 0.910 between residues 25 and 26 TA05525 Tap299b01.p1c.C.cand.11 - score = 9.90 TA17105 Signal peptide predicted for TA17105 by SignalP 2.0 HMM (Signal peptide probability 0.949, signal anchor probability 0.000) with cleavage site probability 0.746 between residues 25 and 26 TA17110 Signal peptide predicted for TA17110 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.557 between residues 25 and 26 TA17115 Telomeric protein, could be part of a family of conserved proteins of variable length; Signal peptide predicted for TA17115 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 25 and 26 TA17120 Related to Theileria parva hypothetical 49.7 kDa protein; Signal peptide predicted for TA17120 by SignalP 2.0 HMM (Signal peptide probability 0.673, signal anchor probability 0.036) with cleavage site probability 0.639 between residues 21 and 22 TA17125 Signal peptide predicted for TA17125 by SignalP 2.0 HMM (Signal peptide probability 0.779, signal anchor probability 0.000) with cleavage site probability 0.719 between residues 20 and 21 TA17130 Signal peptide predicted for TA17130 by SignalP 2.0 HMM (Signal peptide probability 0.880, signal anchor probability 0.016) with cleavage site probability 0.813 between residues 21 and 22 TA17145 1 probable transmembrane helix predicted for TA17145 by TMHMM2.0 at aa 581-603 TA17150 11 probable transmembrane helices predicted for TA17150 by TMHMM2.0 at aa 140-162, 167-189, 202-224, 289-311, 318-340, 397-419, 838-860, 907-929, 977-999, 1003-1022 and 1077-1108 TA17160 10 probable transmembrane helices predicted for TA17160 by TMHMM2.0 at aa 140-162, 175-197, 289-311, 318-340, 397-419, 838-860, 907-929, 960-982, 997-1019 and 1086-1108 TA17170 10 probable transmembrane helices predicted for TA17170 by TMHMM2.0 at aa 144-166, 179-201, 289-311, 318-340, 397-419, 838-860, 901-923, 978-1000, 1005-1022 and 1086-1108 TA17175 1 probable transmembrane helix predicted for TA17175 by TMHMM2.0 at aa 7-24; Signal anchor predicted for TA17175 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.882) with cleavage site probability 0.010 between residues 25 and 26 TA17180 1 probable transmembrane helix predicted for TA17180 by TMHMM2.0 at aa 625-647; Signal peptide predicted for TA17180 by SignalP 2.0 HMM (Signal peptide probability 0.858, signal anchor probability 0.000) with cleavage site probability 0.782 between residues 20 and 21 TA17185 1 probable transmembrane helix predicted for TA17185 by TMHMM2.0 at aa 249-271 TA17200 1 probable transmembrane helix predicted for TA17200 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA17200 by SignalP 2.0 HMM (Signal peptide probability 0.782, signal anchor probability 0.213) with cleavage site probability 0.707 between residues 22 and 23 TA17210 Signal peptide predicted for TA17210 by SignalP 2.0 HMM (Signal peptide probability 0.721, signal anchor probability 0.069) with cleavage site probability 0.269 between residues 23 and 24; GPI-Anchor Signal predicted for TA17210 by DGPI v2.04 with cleavage site probability 0.124699995 near 557 TA17215 1 probable transmembrane helix predicted for TA17215 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA17215 by SignalP 2.0 HMM (Signal peptide probability 0.638, signal anchor probability 0.186) with cleavage site probability 0.433 between residues 25 and 26 TA17220 1 probable transmembrane helix predicted for TA17220 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA17220 by SignalP 2.0 HMM (Signal peptide probability 0.949, signal anchor probability 0.050) with cleavage site probability 0.519 between residues 22 and 23; GPI-Anchor Signal predicted for TA17220 by DGPI v2.04 with cleavage site probability 0.124699995 near 516 TA17240 2 probable transmembrane helices predicted for TA17240 by TMHMM2.0 at aa 143-162 and 166-188 TA17255 Similar to N-terminus of nucleostemins TA17265 2 probable transmembrane helices predicted for TA17265 by TMHMM2.0 at aa 13-35 and 712-734; Signal anchor predicted for TA17265 by SignalP 2.0 HMM (Signal peptide probability 0.278, signal anchor probability 0.717) with cleavage site probability 0.170 between residues 34 and 35 TA17270 Signal peptide predicted for TA17270 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.503 between residues 17 and 18 TA17300 7 probable transmembrane helices predicted for TA17300 by TMHMM2.0 at aa 36-58, 145-167, 182-204, 216-238, 242-264, 284-306 and 360-382; Signal anchor predicted for TA17300 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues -1 and 0 TA17305 Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA17305 by TMHMM2.0 at aa 4-26; Signal peptide predicted for TA17305 by SignalP 2.0 HMM (Signal peptide probability 0.964, signal anchor probability 0.032) with cleavage site probability 0.505 between residues 18 and 19 TA17315 3 probable transmembrane helices predicted for TA17315 by TMHMM2.0 at aa 204-226, 247-269 and 274-296; Signal peptide predicted for TA17315 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.944 between residues 19 and 20 TA17325 4 probable transmembrane helices predicted for TA17325 by TMHMM2.0 at aa 25-44, 57-79, 94-116 and 137-159; Signal anchor predicted for TA17325 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.790) with cleavage site probability 0.000 between residues 39 and 40 TA17340 Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA17340 by TMHMM2.0 at aa 20-42 and 63-85; Signal anchor predicted for TA17340 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.860) with cleavage site probability 0.008 between residues 41 and 42 TA07025 Tap349h10.p1c.C.cand.237 - score = 15.26; 9 probable transmembrane helices predicted for TA07025 by TMHMM2.0 at aa 18-40, 95-114, 124-143, 150-172, 187-209, 235-257, 308-327, 348-370 and 380-402 TA07030 Tap349h10.p1c.C.cand.236 - score = 18.45 TA07035 Tap349h10.p1c.C.cand.235 - score = 11.60 TA07040 Tap349h10.p1c.cand.1 - score = 17.58 TA07045 Tap349h10.p1c.C.cand.234 - score = 14.57 TA07050 Tap349h10.p1c.cand.2 - score = 20.19 TA07060 Tap349h10.p1c.C.cand.233 - score = 26.28 TA07065 Tap349h10.p1c.cand.4 - score = 48.41 TA07070 Tap349h10.p1c.cand.5 - score = 11.41; 6 probable transmembrane helices predicted for TA07070 by TMHMM2.0 at aa 21-43, 63-82, 189-211, 296-318, 325-347 and 362-384; Signal anchor predicted for TA07070 by SignalP 2.0 HMM (Signal peptide probability 0.037, signal anchor probability 0.957) with cleavage site probability 0.019 between residues 42 and 43 TA07125 Tap349h10.p1c.cand.6 - score = 32.26 TA07230 Tap349h10.p1c.C.cand.232 - score = 10.97; 1 probable transmembrane helix predicted for TA07230 by TMHMM2.0 at aa 181-203; Signal peptide predicted for TA07230 by SignalP 2.0 HMM (Signal peptide probability 0.643, signal anchor probability 0.000) with cleavage site probability 0.548 between residues 17 and 18 TA07285 Tap349h10.p1c.C.cand.231 - score = 14.82 TA07290 Tap349h10.p1c.cand.7 - score = 10.26 TA07395 Tap349h10.p1c.C.cand.230 - score = 52.36 TA07450 Tap349h10.p1c.C.cand.229 - score = 23.79 TA07505 Signal peptide predicted for TA07505 by SignalP 2.0 HMM (Signal peptide probability 0.974, signal anchor probability 0.000) with cleavage site probability 0.755 between residues 16 and 17 TA07560 Tap349h10.p1c.C.cand.226 - score = 45.91 TA07565 Tap349h10.p1c.cand.8 - score = 7.93; 1 probable transmembrane helix predicted for TA07565 by TMHMM2.0 at aa 20-42; Signal anchor predicted for TA07565 by SignalP 2.0 HMM (Signal peptide probability 0.008, signal anchor probability 0.984) with cleavage site probability 0.003 between residues 38 and 39; GPI-Anchor Signal predicted for TA07565 by DGPI v2.04, no cleavage site predicted TA07670 Tap349h10.p1c.C.cand.225 - score = 25.48 TA07725 Tap349h10.p1c.C.cand.224 - score = 10.18 TA07780 Tap349h10.p1c.C.cand.223 - score = 72.65 TA07785 Tap349h10.p1c.cand.10 - score = 56.76; 7 probable transmembrane helices predicted for TA07785 by TMHMM2.0 at aa 36-58, 78-100, 136-158, 173-195, 197-219, 293-315 and 353-375 TA07890 Tap349h10.p1c.C.cand.222 - score = 20.93 TA07895 Tap349h10.p1c.cand.11 - score = 27.05 TA08055 Tap349h10.p1c.C.cand.220 - score = 58.63 TA08060 Tap349h10.p1c.cand.12 - score = 7.25 TA08165 Tap349h10.p1c.C.cand.218 - score = 11.16 TA08275 Tap349h10.p1c.C.cand.217 - score = 12.72 TA08280 Tap349h10.p1c.cand.14 - score = 10.88; 2 probable transmembrane helices predicted for TA08280 by TMHMM2.0 at aa 33-55 and 93-115 TA08335 Tap349h10.p1c.cand.14 - score = 10.88 TA08390 Tap349h10.p1c.cand.15 - score = 8.85 TA08495 Tap349h10.p1c.C.cand.214 - score = 15.54 TA08550 Tap349h10.p1c.C.cand.214 - score = 15.54 TA08609 1 probable transmembrane helix predicted for TA08609 by TMHMM2.0 at aa 9-31; Signal anchor predicted for TA08609 by SignalP 2.0 HMM (Signal peptide probability 0.174, signal anchor probability 0.632) with cleavage site probability 0.067 between residues 33 and 34 TA08715 Tap349h10.p1c.C.cand.213 - score = 10.03; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08715 by SignalP 2.0 HMM (Signal peptide probability 0.927, signal anchor probability 0.070) with cleavage site probability 0.455 between residues 27 and 28 TA08720 Tap349h10.p1c.cand.17 - score = 6.84 TA08830 1 probable transmembrane helix predicted for TA08830 by TMHMM2.0 at aa 89-111 TA08885 Tap349h10.p1c.cand.18 - score = 16.44 TA08940 Tap349h10.p1c.cand.19 - score = 11.47 TA08995 Tap349h10.p1c.cand.20 - score = 19.78 TA09050 Tap349h10.p1c.cand.21 - score = 12.50; Signal peptide predicted for TA09050 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.978 between residues 17 and 18 TA09140 Tap349h10.p1c.C.cand.211 - score = 19.47; 1 probable transmembrane helix predicted for TA09140 by TMHMM2.0 at aa 7-28; Signal peptide predicted for TA09140 by SignalP 2.0 HMM (Signal peptide probability 0.958, signal anchor probability 0.042) with cleavage site probability 0.798 between residues 24 and 25 TA09150 Tap349h10.p1c.cand.22 - score = 10.54 TA09155 6 probable transmembrane helices predicted for TA09155 by TMHMM2.0 at aa 27-49, 514-536, 549-571, 586-608, 637-659 and 674-696; Signal anchor predicted for TA09155 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.987) with cleavage site probability 0.000 between residues -1 and 0 TA09160 1 probable transmembrane helix predicted for TA09160 by TMHMM2.0 at aa 84-106 TA09165 Tap349h10.p1c.C.cand.209 - score = 45.88 TA09180 Tap349h10.p1c.cand.23 - score = 11.91 TA09185 Tap349h10.p1c.cand.24 - score = 33.99 TA09200 Tap349h10.p1c.cand.26 - score = 34.60 TA09205 Tap349h10.p1c.cand.27 - score = 28.22; 3 probable transmembrane helices predicted for TA09205 by TMHMM2.0 at aa 47-69, 247-269 and 308-330 TA09210 Tap349h10.p1c.C.cand.207 - score = 35.78 TA09215 Tap349h10.p1c.cand.28 - score = 28.53; 2 probable transmembrane helices predicted for TA09215 by TMHMM2.0 at aa 117-136 and 141-163 TA09220 Tap349h10.p1c.C.cand.206 - score = 31.62 TA09225 Tap349h10.p1c.C.cand.205 - score = 122.95 TA09230 Tap349h10.p1c.C.cand.204 - score = 62.40 TA09235 Tap349h10.p1c.C.cand.203 - score = 8.78 TA09240 Tap349h10.p1c.cand.30 - score = 18.60 TA09245 Tap349h10.p1c.C.cand.202 - score = 9.04; 1 probable transmembrane helix predicted for TA09245 by TMHMM2.0 at aa 137-156 TA09250 Tap349h10.p1c.cand.31 - score = 24.06 TA09255 Tap349h10.p1c.C.cand.201 - score = 12.51; 1 probable transmembrane helix predicted for TA09255 by TMHMM2.0 at aa 172-194; Signal peptide predicted for TA09255 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.800 between residues 17 and 18 TA09260 Tap349h10.p1c.C.cand.200 - score = 19.49 TA09265 Tap349h10.p1c.C.cand.199 - score = 19.62; Signal peptide predicted for TA09265 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.002) with cleavage site probability 0.307 between residues 24 and 25 TA09270 There is overlap with TA09275 gene at the 3' end TA09275 There is overlap with TA09270 gene at the 3' end TA09280 Tap349h10.p1c.C.cand.197 - score = 36.04 TA09285 Tap349h10.p1c.C.cand.196 - score = 18.55; 1 probable transmembrane helix predicted for TA09285 by TMHMM2.0 at aa 175-194 TA09290 Tap349h10.p1c.cand.35 - score = 25.35 TA09295 Tap349h10.p1c.C.cand.195 - score = 51.65 TA09300 Tap349h10.p1c.cand.36 - score = 33.88 TA09315 Tap349h10.p1c.cand.37 - score = 188.68 TA09320 Tap349h10.p1c.C.cand.190 - score = 25.65; 3 probable transmembrane helices predicted for TA09320 by TMHMM2.0 at aa 221-240, 253-271 and 276-295; Signal peptide predicted for TA09320 by SignalP 2.0 HMM (Signal peptide probability 0.946, signal anchor probability 0.000) with cleavage site probability 0.686 between residues 13 and 14 TA09325 Tap349h10.p1c.cand.38 - score = 25.09 TA09330 Tap349h10.p1c.cand.39 - score = 41.75; 6 probable transmembrane helices predicted for TA09330 by TMHMM2.0 at aa 21-40, 50-68, 81-103, 118-140, 175-197 and 747-769; Signal anchor predicted for TA09330 by SignalP 2.0 HMM (Signal peptide probability 0.021, signal anchor probability 0.863) with cleavage site probability 0.007 between residues 38 and 39 TA09335 Tap349h10.p1c.cand.40 - score = 24.15; 3 probable transmembrane helices predicted for TA09335 by TMHMM2.0 at aa 151-173, 206-228 and 248-270 TA09340 Tap349h10.p1c.C.cand.189 - score = 42.71 TA09345 Tap349h10.p1c.C.cand.188 - score = 15.12 TA09350 Tap349h10.p1c.C.cand.188 - score = 15.12 TA09360 Tap349h10.p1c.cand.41 - score = 43.12 TA09365 Tap349h10.p1c.cand.42 - score = 15.82; Signal peptide predicted for TA09365 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.962 between residues 17 and 18 TA09370 Tap349h10.p1c.C.cand.187 - score = 31.09 TA09375 Tap349h10.p1c.C.cand.186 - score = 53.81 TA09380 Tap349h10.p1c.cand.43 - score = 8.87; 3 probable transmembrane helices predicted for TA09380 by TMHMM2.0 at aa 7-24, 57-79 and 230-252 TA09395 Tap349h10.p1c.C.cand.185 - score = 9.77 TA07075 Tap349h10.p1c.cand.45 - score = 12.61; 1 probable transmembrane helix predicted for TA07075 by TMHMM2.0 at aa 141-163 TA07085 Tap349h10.p1c.C.cand.183 - score = 8.83; 1 probable transmembrane helix predicted for TA07085 by TMHMM2.0 at aa 12-34; Signal anchor predicted for TA07085 by SignalP 2.0 HMM (Signal peptide probability 0.090, signal anchor probability 0.900) with cleavage site probability 0.051 between residues 25 and 26 TA07095 Signal peptide predicted for TA07095 by SignalP 2.0 HMM (Signal peptide probability 0.932, signal anchor probability 0.000) with cleavage site probability 0.890 between residues 15 and 16 TA07100 Tap349h10.p1c.C.cand.179 - score = 77.85 TA07105 Tap349h10.p1c.C.cand.179 - score = 77.85 TA07110 Tap349h10.p1c.C.cand.178 - score = 12.78 TA07115 Tap349h10.p1c.cand.49 - score = 9.28 TA07120 Tap349h10.p1c.cand.50 - score = 10.45; 11 probable transmembrane helices predicted for TA07120 by TMHMM2.0 at aa 31-48, 72-94, 101-123, 138-160, 173-195, 215-237, 271-293, 298-320, 350-372, 385-407 and 439-461 TA07130 Tap349h10.p1c.C.cand.177 - score = 14.24; Signal peptide predicted for TA07130 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.974 between residues 17 and 18 TA07135 Tap349h10.p1c.C.cand.176 - score = 37.20 TA07145 Tap349h10.p1c.cand.51 - score = 11.10; 2 probable transmembrane helices predicted for TA07145 by TMHMM2.0 at aa 6-28 and 386-408; Signal peptide predicted for TA07145 by SignalP 2.0 HMM (Signal peptide probability 0.726, signal anchor probability 0.252) with cleavage site probability 0.428 between residues 21 and 22 TA07155 Tap349h10.p1c.C.cand.171 - score = 21.21 TA07160 Tap349h10.p1c.cand.52 - score = 35.26 TA07162 Existence of Exon I not sure, possible pseudogene TA07165 Tap349h10.p1c.cand.53 - score = 17.20 TA07175 gene model may need to be refined (small overlap with TA07180 at the 3' end) TA07180 gene model may need to be refined (small overlap with TA07175 at the 3' end) TA07185 Tap349h10.p1c.C.cand.170 - score = 66.29 TA07190 Tap349h10.p1c.cand.57 - score = 25.39 TA07195 Tap349h10.p1c.cand.58 - score = 11.08 TA07200 Tap349h10.p1c.C.cand.169 - score = 17.49; 7 probable transmembrane helices predicted for TA07200 by TMHMM2.0 at aa 21-43, 53-75, 87-106, 116-138, 145-164, 169-191 and 204-226; Signal anchor predicted for TA07200 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.889) with cleavage site probability 0.000 between residues 43 and 44 TA07205 4 probable transmembrane helices predicted for TA07205 by TMHMM2.0 at aa 53-75, 107-126, 133-155 and 160-182; Signal anchor predicted for TA07205 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.631) with cleavage site probability 0.002 between residues 43 and 44; GPI-Anchor Signal predicted for TA07205 by DGPI v2.04, no cleavage site predicted TA07210 Tap349h10.p1c.C.cand.168 - score = 13.75; 7 probable transmembrane helices predicted for TA07210 by TMHMM2.0 at aa 15-34, 41-63, 78-100, 107-129, 139-156, 161-183 and 198-215; Signal anchor predicted for TA07210 by SignalP 2.0 HMM (Signal peptide probability 0.117, signal anchor probability 0.624) with cleavage site probability 0.039 between residues 36 and 37; GPI-Anchor Signal predicted for TA07210 by DGPI v2.04, no cleavage site predicted TA07215 Tap349h10.p1c.C.cand.167 - score = 35.09 TA07220 Tap349h10.p1c.cand.59 - score = 39.05 TA07225 Tap349h10.p1c.C.cand.166 - score = 36.07 TA07235 Tap349h10.p1c.C.cand.165 - score = 19.34 TA07240 Tap349h10.p1c.C.cand.164 - score = 119.42 TA07245 Tap349h10.p1c.cand.60 - score = 33.31 TA07250 Tap349h10.p1c.cand.61 - score = 85.24 TA07255 Tap349h10.p1c.C.cand.163 - score = 66.69 TA07260 Tap349h10.p1c.cand.62 - score = 71.17 TA07265 Tap349h10.p1c.C.cand.162 - score = 19.37 TA07270 Tap349h10.p1c.cand.63 - score = 74.25; 16 probable transmembrane helices predicted for TA07270 by TMHMM2.0 at aa 10-32, 53-75, 85-107, 137-159, 174-196, 235-257, 277-299, 312-334, 349-371, 376-398, 402-421, 426-448, 923-945, 952-974, 1021-1043 and 1145-1164; Signal peptide predicted for TA07270 by SignalP 2.0 HMM (Signal peptide probability 0.960, signal anchor probability 0.036) with cleavage site probability 0.687 between residues 21 and 22 TA07275 Tap349h10.p1c.C.cand.161 - score = 10.26; 1 probable transmembrane helix predicted for TA07275 by TMHMM2.0 at aa 25-47 TA07280 Tap349h10.p1c.cand.64 - score = 52.99 TA07295 Tap349h10.p1c.C.cand.160 - score = 41.55 TA07300 Tap349h10.p1c.cand.65 - score = 31.55 TA07305 Tap349h10.p1c.C.cand.159 - score = 19.86 TA07310 Tap349h10.p1c.C.cand.158 - score = 35.79 TA07315 Tap349h10.p1c.cand.67 - score = 33.07 TA07320 Tap349h10.p1c.C.cand.157 - score = 11.20 TA07325 Tap349h10.p1c.C.cand.156 - score = 38.27 TA07335 Tap349h10.p1c.cand.68 - score = 118.75 TA07340 Tap349h10.p1c.cand.69 - score = 61.62; 7 probable transmembrane helices predicted for TA07340 by TMHMM2.0 at aa 65-83, 104-126, 130-152, 173-195, 244-266, 705-724 and 739-761 TA07345 Tap349h10.p1c.cand.70 - score = 39.56 TA07350 Tap349h10.p1c.cand.71 - score = 26.69; 1 probable transmembrane helix predicted for TA07350 by TMHMM2.0 at aa 278-300 TA07355 Tap349h10.p1c.C.cand.155 - score = 73.00; 6 probable transmembrane helices predicted for TA07355 by TMHMM2.0 at aa 32-51, 99-121, 136-158, 211-233, 582-604 and 611-633 TA07360 Tap349h10.p1c.cand.72 - score = 50.32 TA07365 Tap349h10.p1c.cand.73 - score = 29.74 TA07370 Tap349h10.p1c.cand.74 - score = 18.68 TA07375 Tap349h10.p1c.C.cand.154 - score = 33.13 TA07380 Tap349h10.p1c.cand.75 - score = 26.94 TA07385 Tap349h10.p1c.C.cand.153 - score = 20.36 TA07390 Tap349h10.p1c.C.cand.152 - score = 12.85 TA07400 Tap349h10.p1c.C.cand.151 - score = 24.88 TA07405 Tap349h10.p1c.cand.76 - score = 21.05; 1 probable transmembrane helix predicted for TA07405 by TMHMM2.0 at aa 7-29 TA07410 Tap349h10.p1c.C.cand.150 - score = 93.48 TA07415 Tap349h10.p1c.cand.77 - score = 26.65; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07415 by SignalP 2.0 HMM (Signal peptide probability 0.991, signal anchor probability 0.000) with cleavage site probability 0.722 between residues 18 and 19 TA07420 Tap349h10.p1c.C.cand.149 - score = 24.86 TA07430 Tap349h10.p1c.cand.78 - score = 53.82 TA07435 Tap349h10.p1c.C.cand.147 - score = 26.38 TA07440 Tap349h10.p1c.C.cand.146 - score = 31.12 TA07445 Tap349h10.p1c.cand.79 - score = 30.89 TA07455 Tap349h10.p1c.cand.80 - score = 8.98; 1 probable transmembrane helix predicted for TA07455 by TMHMM2.0 at aa 2-21; Signal peptide predicted for TA07455 by SignalP 2.0 HMM (Signal peptide probability 0.761, signal anchor probability 0.235) with cleavage site probability 0.699 between residues 21 and 22 TA07460 Tap349h10.p1c.cand.81 - score = 34.61 TA07465 Tap349h10.p1c.C.cand.145 - score = 26.88; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07465 by SignalP 2.0 HMM (Signal peptide probability 0.993, signal anchor probability 0.000) with cleavage site probability 0.450 between residues 17 and 18 TA07470 Tap349h10.p1c.cand.82 - score = 13.56; 2 probable transmembrane helices predicted for TA07470 by TMHMM2.0 at aa 13-32 and 177-194; Signal peptide predicted for TA07470 by SignalP 2.0 HMM (Signal peptide probability 0.788, signal anchor probability 0.185) with cleavage site probability 0.566 between residues 27 and 28 TA07475 Tap349h10.p1c.C.cand.144 - score = 38.00 TA07480 Tap349h10.p1c.C.cand.143 - score = 21.25; 8 probable transmembrane helices predicted for TA07480 by TMHMM2.0 at aa 21-40, 113-135, 147-169, 211-233, 240-262, 370-392, 399-421 and 464-486; Signal peptide predicted for TA07480 by SignalP 2.0 HMM (Signal peptide probability 0.981, signal anchor probability 0.002) with cleavage site probability 0.547 between residues 37 and 38; GPI-Anchor Signal predicted for TA07480 by DGPI v2.04 with cleavage site probability 0.103199996 near 452 TA07485 Tap349h10.p1c.cand.83 - score = 16.77 TA07490 Tap349h10.p1c.C.cand.142 - score = 60.16 TA07495 Tap349h10.p1c.C.cand.142 - score = 60.16 TA07500 Tap349h10.p1c.C.cand.141 - score = 54.72 TA07520 Tap349h10.p1c.C.cand.138 - score = 32.08 TA07525 Tap349h10.p1c.cand.88 - score = 79.13 TA07530 Tap349h10.p1c.cand.89 - score = 13.62 TA07535 Tap349h10.p1c.C.cand.137 - score = 28.19; 7 probable transmembrane helices predicted for TA07535 by TMHMM2.0 at aa 39-61, 92-114, 119-136, 149-171, 175-197, 225-247 and 276-295; Signal anchor predicted for TA07535 by SignalP 2.0 HMM (Signal peptide probability 0.275, signal anchor probability 0.660) with cleavage site probability 0.102 between residues 63 and 64 TA07540 Tap349h10.p1c.cand.90 - score = 68.84 TA07545 Tap349h10.p1c.C.cand.136 - score = 19.61; SMART DCX (SM00537) at aa 158-240, E()=2.43e-04; CT (SM00441) at aa 16-83, E()=3.22e+03; SPRY (SM00449) at aa 96-200, E()=2.87e+03; overlapping pfam:Pox_A3C (PF05288) at aa 154-219, E()=9.90e+00; overlapping pfam:DCX (PF03607) at aa 179-239, E()=1.60e-01; KOW (SM00739) at aa 193-213, E()=3.88e+03 TA07550 Tap349h10.p1c.C.cand.135 - score = 42.78; SMART pfam:TYA (PF01021) at aa 1-427, E()=5.20e+00; pfam:Cornifin (PF02389) at aa 27-213, E()=2.40e+00; S_TK_X (SM00133) at aa 90-143, E()=2.24e+03; RICIN (SM00458) at aa 187-345, E()=3.20e03; NEAT (SM00725) at aa 209-352, E()=8.72e+05; ZM (SM00735) at aa 263-286, E()=6.50e+03; CRF (SM00039) at aa 328-364, E()=2.53e+03; PRY (SM00589) at aa 329-373, E()=5.59e+03; SOCS (SM00253) at aa 329-369, E()=2.42e+03 TA07555 Tap349h10.p1c.C.cand.134 - score = 21.66; SMART pfam:zf-C3HC4 (PF00097) at aa 43-79, E()=6.00e-02; pfam:Mnd1 (PF03962) at aa 12-144, E()=7.80e+00; ArfGap (SM00105) at aa 26-130, E()=6.59e+02; LIM (SM00132) at aa 29-66, E()=1.96e+03; PHD (SM00249) at aa 30-67, E()=1.03e+03; RINGv (SM00744) at aa 42-67, E()=3.55e+03; RING (SM00184) at aa 43-181, E()=2.85e+00; HMG (SM00398) at aa 50-112, E()=2.96e+03; TRASH (SM00746) at aa 62-93, E()=1.16e+06; pfam:Troponin (PF00992) at aa 73-209, E()=5.90e+00; pfam:DUF466 (PF04328) at aa 99-154, E()=7.40e+00 TA07570 Tap349h10.p1c.cand.92 - score = 45.09; SMART 2 BBOX (SM00336) at aa 252-309, E()=6.05e-04; 314-359, E()=4.54e-01; RPEL (SM00707) at aa 15-41, E()=2.70e+03; EH (SM00027) at aa 56-138, E()=3.62e+03; NGF (SM00140) at aa 140-195, E()=6.12e+02; HintC (SM00305) at aa 185-231, E()=1.08e+03; JAS_MPN (SM00232) at aa 185-329, E()=5.5e+02; DNaseIc (SM00476) at aa 237-430, E()=5.09e+03; overlapping pfam:FYVE (PF01363) at aa 245-296, E()=5.20e-01; FYVE (SM00064) at aa 246-296, E()=8.19e+00; AWS (SM00570) at aa 252-305, E()=2.86e+03; overlapping pfam:zf-B_box (PF00643) at aa 252-309, E()=4.90e-03; FES (SM00525) at aa 253-272, E()=6.90e+03; PHD (SM00249) at aa 256-335, E()=5.35e+02; DM6 (SM00689) at aa 256-368, E()=1.09e+03; overlapping pfam:PHD (PF00628) at aa 256-293, E()=2.00e+00 TA07575 Tap349h10.p1c.C.cand.133 - score = 24.23; SMART 6 transmembrane domains at aa 37-59, 119-141, 148-165, 169-191, 212-234 and 244-286; 6 probable transmembrane helices predicted for TA07575 by TMHMM2.0 at aa 37-59, 119-141, 148-165, 169-191, 212-234 and 244-266 TA07580 Tap349h10.p1c.C.cand.132 - score = 9.16; SMART pfam:BolA (PF01722) at aa 1-77, E()=6.70e-24 TA07585 Tap349h10.p1c.C.cand.130 - score = 192.95; SMART 1 transmembrane domain at aa 34-51; 1 probable transmembrane helix predicted for TA07585 by TMHMM2.0 at aa 34-51; Signal anchor predicted for TA07585 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.747) with cleavage site probability 0.000 between residues 24 and 25 TA07590 Tap349h10.p1c.C.cand.129 - score = 21.36; SMART pfam:Ribosomal_S11 (PF00411) at aa 29-147, E()=1.70e-67; pfam:Ribosomal_L18p (PF00861) at aa 2.30e+00; PGRP (SM00701) at aa 20-104, E()=4.69e+03 TA07595 gene model may need to be refined (small strand overlap with TA07600 at the 3' end); SMART 1 transmembrane domain at aa 7-29; pfam: PseudoU_synth_1 (PF01416) at aa 348-457, E()=5.20e-07; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA07595 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA07595 by SignalP 2.0 HMM (Signal peptide probability 0.646, signal anchor probability 0.009) with cleavage site probability 0.430 between residues 22 and 23 TA07600 gene model may need to be refined (small strand overlap with TA07595 at the 3' end) TA07605 Tap349h10.p1c.C.cand.126 - score = 107.93; SMART pfam:GTP_EFTU (PF00009) at aa 107-270, E()=2.80e-06; pfam:ras (PF00071) at aa 112-253, E()=6.40e-02; pfam:DUF164 (PF02591) at aa 365-577, E()=5.20e-02 TA07610 Tap349h10.p1c.C.cand.126 - score = 107.93; SMART 1 transmembrane domain at aa 13-35; 1 probable transmembrane helix predicted for TA07610 by TMHMM2.0 at aa 13-35 TA07615 Tap349h10.p1c.C.cand.125 - score = 45.35 TA07620 Tap349h10.p1c.C.cand.125 - score = 45.35; SMART RL11 (SM00649) at aa 13-144, E()=2.45e-47 TA07625 Tap349h10.p1c.C.cand.125 - score = 45.35 TA07630 Tap349h10.p1c.C.cand.124 - score = 28.48; SMART 3 transmembrane domains at 20-42, 139-161 and 190-212; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA07630 by TMHMM2.0 at aa 20-42, 139-161 and 190-212; Signal anchor predicted for TA07630 by SignalP 2.0 HMM (Signal peptide probability 0.019, signal anchor probability 0.933) with cleavage site probability 0.009 between residues 37 and 38 TA07635 Tap349h10.p1c.C.cand.123 - score = 123.37 TA07640 Tap349h10.p1c.C.cand.123 - score = 123.37; SMART 8 WD40 (SM00320) at aa 553-591, E()=6.42e-01; 594-633, E()=8.47e-12; 635-681, E()=6.73e-06; 684-724, E()=1.11e-06; 727-808, E()=5.50e+01; 813-852, E()=6.32e-11; 855-894, E()=2.95e-11; 897-929, E()=8.52e+01 TA07645 Tap349h10.p1c.cand.95 - score = 69.76 TA07650 Tap349h10.p1c.cand.96 - score = 28.97; SMART 7 WD40 (SM00320) at aa 13-55, E()=6.90e-01; 65-104, E()=6.84e-07; 107-146, E()=8.60e-13; 148-191, E()=1.76e-09; 194-233, E()=1.20e-11; 236-273, E()=1.29e-02; and 276-321, E()=6.89e-03 TA07655 Tap349h10.p1c.cand.97 - score = 61.54; SMART 10 LRR_SD22 (SM00365) domains, at aa 21-40, E()=5.54e+02; 41-62, E()=4.30e-05; 63-84, E()=3.55e-06; 85-106, E()=2.01e-05; 107-128, E()=3.11e-02; 129-150, E()=4.48e+01; 151-177, E()=6.03e+02; 196-217, E()=4.06e+02; 219-240, E()=2.71e-02; 241-259, E()=4.01e+01; LRR_TYP (SM00369) at aa 172-195, E()=1.01e+02 TA07660 Tap349h10.p1c.cand.97 - score = 61.54 TA07665 Tap349h10.p1c.C.cand.122 - score = 16.38 TA07675 Tap349h10.p1c.cand.98 - score = 20.01; SMART PINT (SM00088) at aa 251-344, E()=1.10e-10 TA07680 Tap349h10.p1c.C.cand.121 - score = 28.83; SMART pfam:Peptidase_M22 (PF00814) at aa 13-296, E()=1.50e-68; pfam:TPK_catalytic (PF04263) at aa 220-313, E()=5.00e-02 TA07685 Tap349h10.p1c.C.cand.120 - score = 27.98 TA07690 Tap349h10.p1c.cand.100 - score = 60.93; SMART DYNc (SM00053) at aa 6-253, E()=2.74e-90; GED (SM00302) at aa 550-641, E()=4.38e-13 TA07695 Tap349h10.p1c.cand.102 - score = 60.83; SMART pfam:Adaptin_N (PF01602) at aa 19-558, E()=3.80e-34 TA07700 Tap349h10.p1c.cand.103 - score = 15.31; SMART pfam:DSS1_SEM1 (PF05160) at aa 13-83, E()=9.40e-02 TA07705 Tap349h10.p1c.C.cand.119 - score = 28.39 TA07710 Tap349h10.p1c.C.cand.119 - score = 28.39 TA07715 Tap349h10.p1c.cand.104 - score = 15.03; SMART pfam:zf-DHHC (PF01529) at aa 135-199, E()=9.70e-31; 3 transmembrane domains at aa 38-60, 75-97 and 229-251; 4 probable transmembrane helices predicted for TA07715 by TMHMM2.0 at aa 38-60, 75-97, 192-214 and 229-251 TA07720 Tap349h10.p1c.cand.105 - score = 15.74; SMART 10 transmembrane domains at aa 13-35, 126-148, 160-182, 187-209, 222-244, 275-297, 310-329, 358-380, 399-421 and 431-453; 10 probable transmembrane helices predicted for TA07720 by TMHMM2.0 at aa 13-35, 126-148, 160-182, 187-209, 222-244, 275-297, 310-329, 358-380, 399-421 and 431-453 TA07730 Tap349h10.p1c.cand.106 - score = 33.64; SMART 9 transmembrane domains at aa 22-44, 238-260, 270-292, 333-355, 375-397, 410-432, 474-496, 517-539, and 549-551; 9 probable transmembrane helices predicted for TA07730 by TMHMM2.0 at aa 22-44, 238-260, 270-292, 333-355, 375-397, 410-432, 474-496, 517-539 and 549-571 TA07735 Tap349h10.p1c.C.cand.118 - score = 20.84; SMART pfam:Cdc73 (PF05179) at aa 170-406, E()=8.20e-08 TA07740 Tap349h10.p1c.cand.107 - score = 11.72; SMART pfam:NUDIX (PF00293) at aa 8-141, E()=2.20e-17 TA07750 1 probable transmembrane helix predicted for TA07750 by TMHMM2.0 at aa 838-860 TA07760 Tap349h10.p1c.cand.110 - score = 17.61 TA07765 Tap349h10.p1c.C.cand.116 - score = 29.43; SMART 9 transmembrane domains at aa 46-69, 90-112, 122-144, 151-173, 188-210, 272-294, 309-328, 637-659 and 664-683; 9 probable transmembrane helices predicted for TA07765 by TMHMM2.0 at aa 47-69, 90-112, 122-144, 151-173, 188-210, 272-294, 309-328, 637-659 and 664-683 TA07770 Tap349h10.p1c.C.cand.115 - score = 35.85; SMART 10 transmembrane domains at aa 21-43, 336-358, 370-392, 396-418, 439-461, 486-508, 521-539, 578-600, 620-642 and 652-674; pfam:PspA_IM30 (PF04012) at aa 73-299, E()=2.10e-02; 10 probable transmembrane helices predicted for TA07770 by TMHMM2.0 at aa 21-43, 336-358, 370-392, 396-418, 439-461, 486-508, 521-539, 578-600, 620-642 and 652-674 TA07775 Tap349h10.p1c.C.cand.114 - score = 138.27 TA07790 Tap349h10.p1c.C.cand.114 - score = 138.27; SMART pfam:Ribosomal_S4 (PF00163) at aa 4-106, E()=1.60e-31; S4 (SM00363) at aa 107-171, E()=9.82e-05 TA07795 Tap349h10.p1c.C.cand.114 - score = 138.27 TA07800 Tap349h10.p1c.C.cand.114 - score = 138.27; SMART pfan:Peptidase_M24 (PF00557) at aa 228-430, E()=3.50e-03 TA07805 Tap349h10.p1c.cand.112 - score = 18.62; SMART 2 RRM (SM00360) at aa 8-78, E()=2.56e-21; 104-173, E()=1.26e-02 TA07810 Tap349h10.p1c.cand.113 - score = 19.59 TA07815 Tap349h10.p1c.C.cand.113 - score = 18.51; SMART pfam:proteasome (PF00227) at aa 12-199, E()=6.70e-38 TA07820 Tap349h10.p1c.C.cand.112 - score = 38.09; SMART CYCLIN (SM00385) at aa 47-126, E()=6.55e-02 TA07825 Tap349h10.p1c.cand.114 - score = 7.46; SMART 2 domains pfam:ATP-synt_C (PF00137) at aa 12-77, E()=2.00e-10; 90-155, E()=4.80e-16; 4 probable transmembrane helices predicted for TA07825 by TMHMM2.0 at aa 10-32, 53-75, 90-112 and 132-154 TA07830 SMART RRM (SM00360) at aa 109-182, E()=6.37e-08; PWI (SM00311) at aa 476-552, E()=1.01e-03 TA07835 Tap349h10.p1c.cand.115 - score = 9.46; SMART pfam:UPF0099 (PF01981) at aa 27-110, E()=1.00e-01 TA07840 Tap349h10.p1c.C.cand.109 - score = 13.20; SMART H3 (SM00428) at aa 34-136, E()=1.07e-71 TA07845 Tap349h10.p1c.cand.116 - score = 14.82; SMART H2A (SM00414) at aa 4-124, E()=7.37e-75 TA07850 Tap349h10.p1c.cand.117 - score = 60.80; SMART 3 TPR domains (SM00028) at aa 139-172, E()=8.87e+00; 384-417, E()=4.80e+01; 797-830, E()=1.53e+00 TA07855 SMART pfam:Ribosomal_L19 (PF01245) at aa 122-221, E()=3.50e-07 TA07860 Tap349h10.p1c.C.cand.108 - score = 38.14; SMART ZnF_C2HC (SM00343) at aa 93-109, E()=5.37e+00 TA07865 Tap349h10.p1c.cand.119 - score = 14.40; SMART 3 transmembrane domains at aa 22-44, 56-78 and 188-210; pfam:zf-DHHC (PF01529) at aa 91-155, E()=1.10e-32; 4 probable transmembrane helices predicted for TA07865 by TMHMM2.0 at aa 22-44, 56-78, 145-167 and 188-210; Signal anchor predicted for TA07865 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.942) with cleavage site probability 0.001 between residues 19 and 20 TA07870 Tap349h10.p1c.C.cand.105 - score = 89.12; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA07870 by SignalP 2.0 HMM (Signal peptide probability 0.997, signal anchor probability 0.000) with cleavage site probability 0.979 between residues 16 and 17 TA07875 Tap349h10.p1c.cand.120 - score = 33.83; SMART 2 PLDc domains (SM00155) at aa 162-189, E()=7.88e-04; 357-384, E()=1.02e-02 TA07880 Tap349h10.p1c.C.cand.104 - score = 90.49 TA07885 Tap349h10.p1c.C.cand.104 - score = 90.49 TA07900 Tap349h10.p1c.cand.121 - score = 125.29; SMART pfam:RNA_pol_Rpb2_1 (PF04563) at aa 10-274, E()=4.40e-15; pfam:RNA_pol_Rpb2_3 (PF04565) at aa 492-561, 3.30e-27; pfam:RNA_pol_Rpb2_6 (PF00562) at aa 746-1137, E()=3.10e-112; pfam:RNA_pol_Rpb2_7 (PF04560) at aa 1139-1209, E()=1.90e-12; 1 probable transmembrane helix predicted for TA07900 by TMHMM2.0 at aa 236-258 TA07905 Tap349h10.p1c.cand.121 - score = 125.29; SMART MACPF (SM00457) at aa 215-400, E()=1.11e-01 TA07910 SMART MACPF (SM00457) at aa 179-364, E()=9.11-01 TA07915 Tap349h10.p1c.cand.122 - score = 24.17 TA07920 Tap349h10.p1c.C.cand.102 - score = 48.28 TA07925 Tap349h10.p1c.C.cand.101 - score = 105.93; SMART pfam:RNA_pol_Rpb2_1 (PF04563) at aa 73-484, E()=1.20e-44; pfam:RNA_pol_Rpb2_2 (PF04561) at aa 241-426, E()=3.10e-56; pfam:RNA_pol_Rpb2_3 (PF04565) at aa 517-585, E()=1.10e-35; pfam:RNA_pol_Rpb2_4 (PF04566) at aa 619-681, E()=9.40e-28; pfam:RNA_pol_Rpb2_5 (PF04567) at aa 701-747, E()=6.80e-22; pfam:RNA_pol_Rpb2_6 (PF00562) at aa 752-1127, E()=3.20e-180; pfam:RNA_pol_Rpb2_7 (PF04560) at aa 1129-1221, E()=4.60e-51 TA07930 Tap349h10.p1c.cand.124 - score = 17.74; SMART 3 transmembrane domains at aa 85-104, 152-169 and 205-227; 3 probable transmembrane helices predicted for TA07930 by TMHMM2.0 at aa 85-104, 152-169 and 205-227 TA07935 Tap349h10.p1c.cand.125 - score = 25.97; SMART 4 transmembrane domains at aa 39-61, 68-90, 175-197 and 204-226; 4 probable transmembrane helices predicted for TA07935 by TMHMM2.0 at aa 39-61, 68-90, 175-197 and 204-226 TA07940 Tap349h10.p1c.cand.126 - score = 46.53; SMART pfam:Kelch (PF01344) at aa 21-66, E()=9.10e-05; 3 Kelch domains (SM00612) at aa 159-209, E()=9.10e-05; 210-259, E()=6.53e-01; 260-310, E()=2.43e+00; BTB (SM00225) at aa 379-505, E()=6.68e-17 TA07945 SMART pfam:Myosin_tail (PF01576) at aa 81-879, E()=5.80e-02; pfam:DUF164 (PF02591) at aa 437-661, E()=6.10e-02; pfam:CENP-B_N (PF04218) at aa 1197-1248, E()=9.30e-02 TA07950 Tap349h10.p1c.cand.128 - score = 47.77 TA07955 Tap349h10.p1c.C.cand.100 - score = 19.35 TA07960 SMART pfam:UCR_hinge (PF02320) at aa 27-98, E()=1.20e-04 TA07965 Tap349h10.p1c.C.cand.99 - score = 66.36 TA07970 SMART pfam:HORMA (PF02301) at aa 11-197, E()=8.20e-05; GPI-Anchor Signal predicted for TA07970 by DGPI v2.04 with cleavage site probability 0.36720002 near 297 TA07975 SMART pfam:Gar1 (PF02301) at aa 23-131, E()=5.70e-37 TA07980 Tap349h10.p1c.cand.130 - score = 23.30; SMART pfam:FtsJ (PF01728) at aa 35-216, E()=1.60e-62 TA07985 Tap349h10.p1c.C.cand.97 - score = 13.33; SMART 23 transmembrane domains at aa 94-116, 120-142, 149-171, 181-200, 213-235, 264-286, 298-320, 324-346, 353-375, 385-407, 414-436, 462-484, 511-533, 548-567, 580-597, 607-629, 642-664, 674-696, 728-750, 754-776, 789-811, 821-843 and 967-989; 24 probable transmembrane helices predicted for TA07985 by TMHMM2.0 at aa 30-52, 94-116, 120-142, 149-171, 181-200, 213-235, 264-286, 298-320, 324-346, 353-375, 385-407, 414-436, 462-484, 511-533, 548-567, 580-597, 607-629, 642-664, 674-696, 728-750, 754-776, 789-811, 821-843 and 967-989 TA07990 Tap349h10.p1c.C.cand.96 - score = 27.71 TA07995 Tap349h10.p1c.cand.131 - score = 121.20; SMART pfam:DER1 (PF04511) at aa 870-1081, E()=4.50e-02 TA08010 Tap349h10.p1c.cand.132 - score = 43.78 TA08015 Tap349h10.p1c.C.cand.95 - score = 31.50; SMART RINGv (SM00744) at aa 209-272, E()=4.62e-18; FHA (SM00240) at aa 320-370, E()=7.50e-05 TA08020 SMART Sm (SM00651) at aa 8-73, E()=1.72e-10 TA08025 Tap349h10.p1c.cand.134 - score = 66.33 TA08030 Tap349h10.p1c.cand.135 - score = 58.85 TA08035 Tap349h10.p1c.C.cand.94 - score = 35.59 TA08040 Tap349h10.p1c.cand.136 - score = 46.59; SMART 4 WD40 domains (SM00320) at aa 49-94, E()=3.84e+00; 149-194, E()=1.37e-06; 227-268, E()=3.30e+01; 271-308, E()=2.76e+00 TA08045 Tap349h10.p1c.cand.137 - score = 83.09; SMART IBN_NT (PF03820) at aa 25-91, E()=2.00e-03 TA08050 Tap349h10.p1c.C.cand.93 - score = 83.05; SMART DEXDc (SM0487) at aa 179-364, E()=2.90e-32; HELICc (SM00490) at aa 480-566, E()=1.82e-15 TA08065 Tap349h10.p1c.C.cand.92 - score = 46.47; SMART pfam:Peptidase_S9 (PF00326) at aa 548-627, E()=8.60e-07 TA08070 Tap349h10.p1c.cand.138 - score = 30.88; SMART pfam:proteasome (PF00227) at aa 32-224, E()=7.50e-06 TA08075 Tap349h10.p1c.C.cand.91 - score = 71.18; SMART pfam:tRNA-synt_1b (PF00579) at aa 89-382, E()=8.90e-49 TA08080 Tap349h10.p1c.C.cand.91 - score = 71.18; SMART VWA (SM00237) at aa 4-171, E()=4.11e-01; pfam:KNOX2 (PF03791) at aa 206-255, E()=5.30e-02 TA08085 SMART pfam:XRN_N (PF03159) at aa 1-269, E()=3.70e-116 TA08090 Tap349h10.p1c.cand.141 - score = 123.43; SMART pfam:Cnd1 (PF04594) at aa 361-481, E()=2.10e-02; pfam:SEA (PF01390) at aa 320-439, E()=5.10e-02; pfam:DUF577 (PF04510) at aa 1411-1566, E()=3.20e-02 TA08095 Tap349h10.p1c.cand.142 - score = 22.55 TA08100 Tap349h10.p1c.C.cand.90 - score = 45.39 TA08105 Tap349h10.p1c.cand.143 - score = 41.76; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08105 by SignalP 2.0 HMM (Signal peptide probability 0.994, signal anchor probability 0.000) with cleavage site probability 0.607 between residues 23 and 24 TA08110 Tap349h10.p1c.C.cand.89 - score = 24.64; SMART 1 transmembrane domain at aa 37-59; TBC (SM00164) at aa 109-346, E()=1.56e-25; 1 probable transmembrane helix predicted for TA08110 by TMHMM2.0 at aa 37-59; Signal anchor predicted for TA08110 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.954) with cleavage site probability 0.000 between residues 53 and 54; GPI-Anchor Signal predicted for TA08110 by DGPI v2.04, no cleavage site predicted TA08115 Tap349h10.p1c.cand.144 - score = 26.99 TA08120 Tap349h10.p1c.C.cand.88 - score = 88.44; SMART 4 WD40 domains (SM00320) at aa 8-47, E()+8.88e+00; 145-183, E()=1.12e-02; 1447-1482, E()=1.60e+00; 1485-1525, E()=8.22e+01 TA08125 Tap349h10.p1c.cand.145 - score = 22.82; SMART pfam:CBFD_NFYB_HMF (PF00808) at aa 44-106, E()=2.30e-02 TA08130 Tap349h10.p1c.C.cand.87 - score = 22.46; SMART AAA (SM00382) at aa 39-176, E()=1.88e-12 TA08135 Tap349h10.p1c.cand.146 - score = 34.68; SMART AAA (SM00382) at aa 286-419, E()=9.30e-03 TA08140 Tap349h10.p1c.cand.147 - score = 30.46 TA08145 Tap349h10.p1c.C.cand.86 - score = 34.95; SMART pfam:gpdh (PF00044) at aa 2-152, E()=9.70e-77; pfam:gpdh_C (PF02800) at aa 153-316, E()=6.10e-116 TA08150 Tap349h10.p1c.C.cand.85 - score = 27.61; SMART pfam:Cytochrome_C1 (PF02167) at aa 158-383, E()=1.70e-109; 1 probable transmembrane helix predicted for TA08150 by TMHMM2.0 at aa 360-379 TA08155 Tap349h10.p1c.cand.148 - score = 29.10; SMART ZnF_U1 (SM00451) at aa 93-127, E()=6.72e-10; ZnF_C2H2 (SM00355) at aa 96-120, E()=2.17e+01 TA08160 Tap349h10.p1c.C.cand.84 - score = 20.65; SMART pfam:Syntaxin (PF00804) at aa 60-218, E()=1.90e-02; t_SNARE (SM00397) at aa 225-284, E()=6.08e-01 TA08170 SMART pfam:Ribosomal_L13 (PF005822) at aa 1-107, E()=9.80e-32 TA08175 Tap349h10.p1c.cand.149 - score = 50.44; SMART PI3Kc (SM00146) at aa 912-1191, E()=1.14e-59 TA08180 Tap349h10.p1c.C.cand.82 - score = 46.80; SMART pfam:N_Arg (PF03485) at aa 11-99, E()=3.30e-02; pfam:tRNA-synt_1d (PF00750) at aa 121-463, E()=3.90e-126; GPI-Anchor Signal predicted for TA08180 by DGPI v2.04, no cleavage site predicted TA08185 Tap349h10.p1c.C.cand.81 - score = 13.53 TA08190 Tap349h10.p1c.cand.150 - score = 9.60 TA08195 Tap349h10.p1c.cand.151 - score = 9.00; SMART pfam:Ribosomal_L14 (PF00238) at aa 9-123, E()=5.40e-17 TA08200 Tap349h10.p1c.C.cand.80 - score = 19.30; SMART RRM (SM00360) at aa 8-81, E()=1.35e-20 TA08205 Tap349h10.p1c.C.cand.79 - score = 10.96; SMART pfam:Ribosomal_L22e (PF01776) at aa 8-122, E()=9.60e-54 TA08210 Tap349h10.p1c.cand.152 - score = 34.70; SMART PINT (SM00088) at aa 330-413, E()=7.57e-14 TA08215 Tap349h10.p1c.C.cand.78 - score = 37.63; SMART PINT (SM00088) at aa 326-415, E()=4.66e-14 TA08225 Tap349h10.p1c.C.cand.77 - score = 20.87; SMART pfam:NOT (PF04153) at aa 138-261, E()=1.90e-06 TA08230 Tap349h10.p1c.C.cand.76 - score = 89.89; SMART ofam:Sec7 (PF01389) at aa 537-690, E()=6.20e-02 TA08235 Tap349h10.p1c.C.cand.75 - score = 38.04; SMART 1 transmembrane domain at aa 344-366; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA08235 by TMHMM2.0 at aa 19-36 and 344-366; Signal anchor predicted for TA08235 by SignalP 2.0 HMM (Signal peptide probability 0.043, signal anchor probability 0.826) with cleavage site probability 0.022 between residues 35 and 36 TA08240 Tap349h10.p1c.C.cand.74 - score = 54.33; SMART 5 RRM domains (SM00360) at aa 11-95, E()=1.28e-03; 207-293, E()=8.72e-15; 412-479, E()=4.82e-08; 535-612, E()=1.62e-09; 637-709, E()=3.01e-18 TA08245 Tap349h10.p1c.cand.154 - score = 13.48; SMART pfam:TP6A_N (PF04406) at aa 19-92, E()=8.50e-05 TA08250 Tap349h10.p1c.cand.154 - score = 13.48 TA08255 Tap349h10.p1c.C.cand.73 - score = 49.97; SMART DnaJ (SM00271) at aa 137-215, E()=7.52e-09; SANT (SM00717) at aa 521-573, E()=3.91e-07 TA08260 Tap349h10.p1c.C.cand.72 - score = 9.47; Signal peptide predicted for TA08260 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.312 between residues 18 and 19 TA08265 Tap349h10.p1c.C.cand.71 - score = 11.93; SMART H2B (SM00427) at aa 8-104, E()=4.65e-63 TA08270 Tap349h10.p1c.cand.155 - score = 41.96 TA08285 Tap349h10.p1c.C.cand.70 - score = 30.38; SMART 9 transmembrane domains at aa 20-42, 239-261, 271-293, 334-356, 376-398, 411-433, 478-500, 521-543 and 553-575; 9 probable transmembrane helices predicted for TA08285 by TMHMM2.0 at aa 20-42, 239-261, 271-293, 334-356, 376-398, 411-433, 478-500, 521-543 and 553-575 TA08290 Tap349h10.p1c.C.cand.68 - score = 13.31 TA08295 Tap349h10.p1c.C.cand.67 - score = 80.92; SMART pfam:SMC_N (PF02463) at aa 1-172, E()=1.10e-55; pfam:filament (PF00038) at aa 699-975, E()=1.00e-01; pfam:SMC_C (PF02483) at aa 1048-1246, E()+3.60e-27; pfam:ABC_tran (PF00005) at aa 1074-1233, E()=3.00e-03 TA08300 Tap349h10.p1c.cand.156 - score = 17.27; SMART PP2Cc (SM00332) at aa 21-321, E()=2.65e-45 TA08305 Tap349h10.p1c.cand.159 - score = 12.07; SMART 2 transmembrane domains at aa 88-110 and 139-158; 2 probable transmembrane helices predicted for TA08305 by TMHMM2.0 at aa 88-110 and 139-158 TA08310 Tap349h10.p1c.cand.160 - score = 36.12 TA08320 SMART pfam:lactamase_B (PF00753) at aa 422-591, E()=6.00e-04 TA08325 Actually it seemed that there is a deletion of the internal part of the Q8IKI3 protein; 12 probable transmembrane helices predicted for TA08325 by TMHMM2.0 at aa 19-38, 48-67, 158-180, 195-217, 238-260, 275-294, 307-329, 339-361, 766-788, 792-814, 1009-1031 and 1057-1079; Signal anchor predicted for TA08325 by SignalP 2.0 HMM (Signal peptide probability 0.130, signal anchor probability 0.844) with cleavage site probability 0.077 between residues 38 and 39; GPI-Anchor Signal predicted for TA08325 by DGPI v2.04, no cleavage site predicted TA08330 SMART 2 transmembrane domains at aa 132-154 and 166-188; 2 probable transmembrane helices predicted for TA08330 by TMHMM2.0 at aa 132-154 and 166-188 TA08340 Tap349h10.p1c.cand.164 - score = 7.18; SMART KH (SM00322) at aa 43-107, E()=2.61e-01 TA08345 Tap349h10.p1c.C.cand.63 - score = 16.71 TA08350 SMART 2 pfam:Kelch domains (PF01344) at aa 16-66, E()=2.00e-03 and 141-188, E()=1.30e-03; 1 transmembrane domain at aa 101-118; PP2Ac (SM00156) at aa 450-755, E()=5.90e-99; 1 probable transmembrane helix predicted for TA08350 by TMHMM2.0 at aa 101-118 TA08355 Tap349h10.p1c.cand.166 - score = 63.70; SMART 5 pfam:PC_rep (PF01851) at aa 454-488, E()=9.70e-03; 491-525, E()=8.40e-04; 526-560, E()=6.60e-05; 632-664, E()=8.00e-02; 666-700, E()=8.20e-02 TA08360 Tap349h10.p1c.C.cand.62 - score = 27.96; Signal peptide predicted for TA08360 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.002) with cleavage site probability 0.900 between residues 18 and 19 TA08365 Tap349h10.p1c.C.cand.61 - score = 41.73; Signal peptide predicted for TA08365 by SignalP 2.0 HMM (Signal peptide probability 0.983, signal anchor probability 0.000) with cleavage site probability 0.880 between residues 16 and 17 TA08370 Tap349h10.p1c.C.cand.60 - score = 51.36; Signal peptide predicted for TA08370 by SignalP 2.0 HMM (Signal peptide probability 0.999, signal anchor probability 0.000) with cleavage site probability 0.868 between residues 21 and 22 TA08375 Tap349h10.p1c.C.cand.59 - score = 32.00 TA08380 Tap349h10.p1c.cand.167 - score = 18.13; SMART PUA (SM00359) at aa 105-177, E()=6.94e-05 TA08385 Tap349h10.p1c.cand.168 - score = 49.53 TA08400 Tap349h10.p1c.C.cand.58 - score = 21.36 TA08405 Tap349h10.p1c.cand.170 - score = 174.08 TA08410 Tap349h10.p1c.cand.170 - score = 174.08; SMART PH (SM00223) at aa 25-185, E()=8.93e-02; DysFC (SM00694) at aa 953-986, E()=2.16e-01; 4 transmembrane domains at aa 572-589, 594-613, 618-640 and 838-860; 4 probable transmembrane helices predicted for TA08410 by TMHMM2.0 at aa 572-589, 594-613, 618-640 and 838-860 TA08415 Tap349h10.p1c.cand.170 - score = 174.08; 2 probable transmembrane helices predicted for TA08415 by TMHMM2.0 at aa 5-27 and 298-329; Signal peptide predicted for TA08415 by SignalP 2.0 HMM (Signal peptide probability 0.990, signal anchor probability 0.000) with cleavage site probability 0.454 between residues 33 and 34 TA08420 Tap349h10.p1c.cand.171 - score = 39.84; SMART pfam:vATP-synt_AC39 (PF01992) at aa 12-377, E()=2.10e-60 TA08425 Tap349h10.p1c.cand.172 - score = 66.70; SMART pfam:DUF529 (PF404385) at aa 268-401, E()=3.40e-02; 1 transmembrane domain at aa 875-892; 1 probable transmembrane helix predicted for TA08425 by TMHMM2.0 at aa 875-892; Signal peptide predicted for TA08425 by SignalP 2.0 HMM (Signal peptide probability 1.000, signal anchor probability 0.000) with cleavage site probability 0.762 between residues 19 and 20; GPI-Anchor Signal predicted for TA08425 by DGPI v2.04 with cleavage site probability 1.131 near 873 TA08435 Tap349h10.p1c.cand.173 - score = 45.37; SMART PINT (SM00088) at aa 356-446, E()=9.99e-14 TA08440 Tap349h10.p1c.cand.174 - score = 76.32 TA08445 Tap349h10.p1c.C.cand.55 - score = 16.85; Signal peptide predicted for TA08445 by SignalP 2.0 HMM (Signal peptide probability 0.959, signal anchor probability 0.040) with cleavage site probability 0.357 between residues 26 and 27 TA08450 Tap349h10.p1c.cand.175 - score = 39.11; SMART pfam:ATP-synt_ab_N (PF02874) at aa 34-100, E()=1.50e-12; pfam:ATP-synT_ab (PF00006) at aa 209-388, E()=2.10e-84; pfam:ATP-synt_ab_C (PF00306) at aa 395-488, E()=2.90e-21 TA08455 Tap349h10.p1c.C.cand.54 - score = 28.03 TA08460 Tap349h10.p1c.cand.176 - score = 39.18 TA08465 Tap349h10.p1c.C.cand.53 - score = 25.72; SMART JAB_MPN (SM00232) at aa 32-175, E()=1.52e-04 TA08470 Tap349h10.p1c.C.cand.52 - score = 42.81; SMART STYKc (SM00221) at aa 101-396, E()=8.39e-07; 113-45, E()=1.01e-19; pfam:cyclin (PF00134) at aa 500-645, E()=1.30e-02 TA08475 Tap349h10.p1c.C.cand.51 - score = 15.46; SMART 3 domains ZnF_C3H1 (SM00356) at aa 69-95, E()=1.56e-02; 101-128, E()=1.91e+00; 130-154, E()=9.02e-01 TA08480 Tap349h10.p1c.cand.177 - score = 44.47; SMART 7 transmembrane domains at aa 180-202, 217-239, 276-298, 379-401, 414-436, 521-540 and 553-575; 7 probable transmembrane helices predicted for TA08480 by TMHMM2.0 at aa 180-202, 217-239, 276-298, 379-401, 414-436, 521-540 and 553-575 TA08485 Tap349h10.p1c.cand.178 - score = 24.33; SMART 1 transmembrane domain at aa 20-42; 1 probable transmembrane helix predicted for TA08485 by TMHMM2.0 at aa 20-42; Signal anchor predicted for TA08485 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.918) with cleavage site probability 0.000 between residues 41 and 42 TA08490 Tap349h10.p1c.cand.179 - score = 32.38; SMART pfam:Fumble (PF03630) at aa 144-503, E()1.10e-10; 1 probable transmembrane helix predicted for TA08490 by TMHMM2.0 at aa 377-396 TA08505 Tap349h10.p1c.cand.180 - score = 9.95 TA08510 Tap349h10.p1c.cand.181 - score = 7.25 TA08515 Tap349h10.p1c.cand.183 - score = 71.00; SMART TBC (SM00164) at aa 373-764, E()=8.83e-03; TLDc (SM00584) at aa 830-1020, E()=8.42e-12; 2 probable transmembrane helices predicted for TA08515 by TMHMM2.0 at aa 632-654 and 679-696 TA08520 Tap349h10.p1c.C.cand.50 - score = 24.98; SMART 9 transmembrane domains at aa 66-88, 95-117, 121-143, 156-178, 198-220, 255-277, 367-389, 396-418 and 473-495; 10 probable transmembrane helices predicted for TA08520 by TMHMM2.0 at aa 21-43, 66-88, 95-117, 121-143, 156-178, 198-220, 255-277, 367-389, 396-418 and 473-495 TA08525 Tap349h10.p1c.C.cand.49 - score = 29.00 TA08530 Tap349h10.p1c.cand.184 - score = 29.91; SMART pfam:biotin_lipoyl (PF00364) at aa 42-115, E()=1.20e-22; pfam:2-oxoacid_dh (PF00198) at aa 168-420, E()=1.90e-65 TA08535 Tap349h10.p1c.C.cand.48 - score = 64.87; SMART 9 transmembrane domains at aa 253-275, 282-304, 309-331, 344-366, 399-421, 434-453, 473-495, 515-534, and 544-566; 9 probable transmembrane helices predicted for TA08535 by TMHMM2.0 at aa 253-275, 282-304, 309-331, 344-366, 399-421, 434-453, 473-495, 515-534 and 544-566 TA08540 Tap349h10.p1c.C.cand.48 - score = 64.87; SMART 11 transmembrane domains at aa 20-42, 498-520, 527-549, 564-581, 590-612, 632-654, 667-686, 713-735, 755-777, 787-806 and 826-843; 11 probable transmembrane helices predicted for TA08540 by TMHMM2.0 at aa 20-42, 498-520, 527-549, 564-581, 590-612, 632-654, 667-686, 713-735, 755-777, 787-806 and 826-843 TA08545 Tap349h10.p1c.C.cand.47 - score = 39.91; SMART pfam:Spc97_Spc98 (PF04120) at aa 42-589, E()=2.40e-87 TA08560 Tap349h10.p1c.C.cand.46 - score = 36.13; SMART 5 ANK domains (SM00248) at aa 84-113, E()=3.65e-03; 118-148, E()=5.58e-+01; 153-189, E()=7.75e+02; 193-222, E()=9.13e-04; 226-256, E()=2.15e+00; ZnF_NFX (SM00438) at aa 505-524, E()=0.00e+00; 4 transmembrane domains at aa 305-327, 337-359, 545-564 and 579-601; 4 probable transmembrane helices predicted for TA08560 by TMHMM2.0 at aa 305-327, 337-359, 545-564 and 579-601 TA08565 Tap349h10.p1c.cand.185 - score = 40.53; SMART pfam:lipin_N (PF04571) at aa 6-114, E()=3.20e-18 TA08570 Tap349h10.p1c.C.cand.45 - score = 17.05; SMART pfam:RNA_pol_Rpb6 (PF01192) at aa 61-135, E()=8.50e-15 (PF01192) TA08575 Tap349h10.p1c.C.cand.44 - score = 12.81; SMART pfam:MSP_domain (PF00635) at aa 4-118, E()=1.00e-21; 1 probable transmembrane helix predicted for TA08575 by TMHMM2.0 at aa 203-222 TA08580 Tap349h10.p1c.C.cand.43 - score = 44.26 TA08585 Tap349h10.p1c.C.cand.42 - score = 41.48 TA08590 Tap349h10.p1c.cand.186 - score = 21.58; SMART pfam:TIM (PF00121) at aa 84-329, E()=7.40e-118 TA08595 Tap349h10.p1c.cand.187 - score = 32.60; SMART pfam:zf-CCCH (PF00642) at aa 175-200, E()=8.60e-02; pfam:rrm (PF00076) at aa 241-316, E()=3.20e-02 TA08600 Tap349h10.p1c.C.cand.41 - score = 12.34 TA08615 Tap349h10.p1c.cand.189 - score = 14.54; SMART pfam:KE2 (PF01920) at aa 4-111, E()=1.90e-08; pfam:Prefoldin (PF02996) at aa 7-109, E()=6.50e-02 TA08620 Tap349h10.p1c.C.cand.40 - score = 44.37; SMART pfam:tRNA-synt_2 (Pf00152) at aa 330-678, E()=2.60e-50; pfam:tRNA-synt_2b (PF00587) at aa 328-463, E()=3.40e-04; pfam:tRNA-synt_2d (PF01409) at aa 344-668, E()=3.70e-03; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA08620 by SignalP 2.0 HMM (Signal peptide probability 0.921, signal anchor probability 0.000) with cleavage site probability 0.692 between residues 23 and 24 TA08625 Tap349h10.p1c.cand.190 - score = 10.80; SMART pfam:RNA_pol_L (PF01193) at aa 1-87, E()=8.10e-28 TA08630 Tap349h10.p1c.cand.191 - score = 62.98; SMART 2 BBOX domains (SM00336) at aa 194-214, E()=3.19e-03 and 246-293, E()=1.84e+00; ZnF_NFX (SM00438) at aa 199-224, E()=0.00e+00 TA08635 Tap349h10.p1c.C.cand.39 - score = 103.11; SMART pfam:Peptidase_M16 (PF00675) at aa 98-238, E()=6.90e-07; pfam:Peptidase_M16_C (PF05193) at aa 253-452, E()=1.00e-02; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA08635 by TMHMM2.0 at aa 13-35; Signal peptide predicted for TA08635 by SignalP 2.0 HMM (Signal peptide probability 0.672, signal anchor probability 0.242) with cleavage site probability 0.237 between residues 32 and 33 TA08640 Tap349h10.p1c.cand.192 - score = 57.37; SMART 4 pfam:HEAT (PF02985) domains at aa 203-239, E()=6.20e-02; 395-433, E()=2.70e-02; 474-512, E()=3.30e-05; 563-601, E()=1.60e-04 TA08645 Tap349h10.p1c.cand.193 - score = 32.78; SMART rADC (SM00650) at aa 84-252, E()=4.31e-65 TA08650 Tap349h10.p1c.C.cand.38 - score = 133.54; SMART pfam:zf-HIT (PF04438) at aa 865-902, E()=3.70e-05 TA08655 Tap349h10.p1c.C.cand.38 - score = 133.54 TA08660 Tap349h10.p1c.C.cand.37 - score = 62.96 TA08665 Tap349h10.p1c.cand.195 - score = 12.90; SMART pfam:Ribosomal_L44 (PF00935) at aa 18-94, E()=1.60e-42 TA08670 Tap349h10.p1c.cand.196 - score = 32.56; SMART 8 transmembrane domains, at aa 73-95, 110-132, 152-174, 194-216, 390-412, 471-493, 514-536 and 564-586; 9 probable transmembrane helices predicted for TA08670 by TMHMM2.0 at aa 10-32, 73-95, 110-132, 152-174, 194-216, 390-412, 471-493, 514-536 and 564-586; Signal peptide predicted for TA08670 by SignalP 2.0 HMM (Signal peptide probability 0.854, signal anchor probability 0.145) with cleavage site probability 0.276 between residues 22 and 23 TA08675 Tap349h10.p1c.C.cand.36 - score = 105.97; SMART pfam:TPR (PF00515) at aa 78-111, E()=2.40e-03 TA08680 Tap349h10.p1c.C.cand.36 - score = 105.97 TA08685 Tap349h10.p1c.C.cand.35 - score = 69.83; SMART 10 WD40(SM00320) domains at aa 155-194, E()=1.30e-07; 200-238, E()=2.40e-01; 276-315, E()=2.84e+02; 318-360, E()=1.07e+01; 363-431, E()=8.62e-04; 434-473, E()=8.55e-08; 479-517, E()=5.70e+01; 520-562, E()=7.16e-10; 570-608, E()=1.92e+00; 742-782, E()=4.77e+00; pfam:PWP2 (PF04047) at aa 831-957, E()=3.60e-04 TA08690 1 probable transmembrane helix predicted for TA08690 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA08690 by SignalP 2.0 HMM (Signal peptide probability 0.962, signal anchor probability 0.024) with cleavage site probability 0.845 between residues 22 and 23 TA08700 Tap349h10.p1c.cand.198 - score = 25.77; SMART SprT (SM00371) at aa 20-187, E()=9.94e-30 TA08705 SMART pfam:GST_C (PF00043) at aa 81-189, E()=3.60e-02; pfam:EF1G_domain (PF00647) at aa 225-335, E()=6.20e-28 TA08710 Tap349h10.p1c.cand.199 - score = 20.44; SMART pfam:Ribosomal_L6e (PF01159) at aa 81-212, E()=6.40e-18 TA08725 Tap349h10.p1c.C.cand.32 - score = 70.32; SMART AAA (SM00382) at aa 241-377, E()=1.96e-19; pfam:Peptidase_M41 (PF01434) at aa 434-646, E()=7.60e-73; 1 probable transmembrane helix predicted for TA08725 by TMHMM2.0 at aa 167-184 TA08730 Tap349h10.p1c.C.cand.31 - score = 50.81 TA08735 Tap349h10.p1c.cand.200 - score = 66.23; SMART ZnF_ZZ (SM00291) at aa 358-404, E()=2.81e-02 TA08740 Tap349h10.p1c.C.cand.30 - score = 40.07 TA08745 Tap349h10.p1c.cand.201 - score = 50.18; SMART pfam:PH (PF00169) at aa 219-313, E()=3.30e-03; Signal peptide predicted for TA08745 by SignalP 2.0 HMM (Signal peptide probability 0.973, signal anchor probability 0.013) with cleavage site probability 0.946 between residues 22 and 23 TA08750 Tap349h10.p1c.cand.202 - score = 84.04; SMART pfam:SMC_N (PF02463) at aa 4-186, E()=1.70e-03; pfam:DNA_pol3_beta (PF00712) at aa 783-888, E()=7.90e-02; pfam:SMC_C (PF02483) at aa 872-1061, E()=1.90e-03 TA08755 Tap349h10.p1c.cand.203 - score = 58.41; SMART DEXDc (SM00487) at aa 247-453, E()=7.55e-31; HELICc (SM00490) at 485-566, E()=1.03e-23 TA08760 Tap349h10.p1c.C.cand.29 - score = 20.36 TA08765 Tap349h10.p1c.C.cand.28 - score = 67.72 TA08770 Tap349h10.p1c.C.cand.27 - score = 19.88 TA08775 Tap349h10.p1c.C.cand.26 - score = 52.02; SMART pfam:DiHfolate_red (P00186) at aa 10-197, E()=2.00e-28; pfam:thymidilat_synt (PF00303) at aa 238-523, E()=3.60e-195 TA08780 Tap349h10.p1c.C.cand.25 - score = 9.84; SMART 1 transmembrane domain at aa 24-41; 1 probable transmembrane helix predicted for TA08780 by TMHMM2.0 at aa 24-41 TA08785 Tap349h10.p1c.cand.204 - score = 69.41; SMART STYKc (SM00221) at aa 393-647, E()=5.49e-09 TA08790 Tap349h10.p1c.cand.205 - score = 120.63; SMART 2 SANT (SM00717) domains at aa 1162-1210, E()=1.27e-06; 1492-1542, E()=7.94e-08 TA08795 Tap349h10.p1c.cand.205 - score = 120.63 TA08800 Tap349h10.p1c.cand.206 - score = 75.36; SMART 1 transmembrane domain at aa 208-230; MCM (SM00350) at aa 310-861, E()=2.61e-20; 2 probable transmembrane helices predicted for TA08800 by TMHMM2.0 at aa 208-230 and 322-341 TA08805 Tap349h10.p1c.cand.207 - score = 66.61 TA08815 Tap349h10.p1c.C.cand.24 - score = 61.44; SMART pfam:GTP_EFTU (PF00009) at aa 100-334, E()=6.10e-80; pfam:GTP_EFTU_D2 (PF03144) at aa 351-420, E()=4.20e-07; pfam:GTP_EFTU_D3 (PF03143) at aa 425-536, E()=4.20e-11 TA08820 Tap349h10.p1c.cand.208 - score = 35.31; SMART RING (SM00184) at aa 9-46, E()=2.80e-08 TA08835 Tap349h10.p1c.C.cand.23 - score = 24.30; SMART 4 LRR domains (SM00370) at aa 71-96, E()=1.62e+01; 102-127, E()=7.48e+01; 216-241, E()=3.67e+02; 265-289, E()=3.89e+02 TA08840 Tap349h10.p1c.C.cand.22 - score = 88.36; SMART 3 EFh domains (SM00054) at aa 62-90, E()=2.44e+01; 98-126, E()=6.88e-01; 413-441, E()=3.64e+01; ZnF_NFX (SM00438) at aa 581-606, E()=0.00e+00; PH (SM00233) at aa 718-818, E()=1.15e-13; S_TKc (SM00220) at aa 824-1080, E()=4.00e-96 TA08845 Tap349h10.p1c.cand.209 - score = 133.99; SMART ZnF_UBR1 (SM00396) at aa 57-126, E()=3.93e-15; RING (SM00184) at aa 983-1077, E()=2.93e-02 TA08855 Tap349h10.p1c.C.cand.21 - score = 124.65; SMART 2 transmembrane domains 1706-1728 and 1910-1932; 2 probable transmembrane helices predicted for TA08855 by TMHMM2.0 at aa 1706-1728 and 1910-1932 TA08860 Tap349h10.p1c.cand.210 - score = 45.26 TA08865 Tap349h10.p1c.C.cand.20 - score = 13.46; SMART pfam:Mannosyl_trans (PF05007) at aa 141-417, E()=2.60e-35; 8 probable transmembrane helices predicted for TA08865 by TMHMM2.0 at aa 20-42, 140-162, 169-191, 227-249, 287-309, 329-346, 353-375 and 390-412 TA08875 Tap349h10.p1c.cand.211 - score = 19.92 TA08880 1 probable transmembrane helix predicted for TA08880 by TMHMM2.0 at aa 20-39; Signal anchor predicted for TA08880 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 1.000) with cleavage site probability 0.000 between residues 40 and 41 TA08890 Tap349h10.p1c.cand.213 - score = 59.06; SMART pfam:Kelch (PF01344) at aa 365-421, E()=4.00e-05 TA08895 Tap349h10.p1c.C.cand.19 - score = 11.24; SMART pfam:RNA_POL_M_15KD (PF02150) at aa 4-55, E()=6.50e-02; ZnF_C2C2 (SM00440) at aa 69-108, E()=7.08e-20 TA08900 Tap349h10.p1c.C.cand.18 - score = 64.48; SMART XPGN (SM00485) at aa 64-159, E()=5.25e-13; XPGI (SM00484) at aa 597-665, E()=9.56e-25; HhH2 (SM00279) at aa 667-700, E()=1.02e-10 TA08905 Tap349h10.p1c.cand.214 - score = 13.22 TA08910 Tap349h10.p1c.cand.215 - score = 11.51 TA08915 Tap349h10.p1c.cand.217 - score = 31.95 TA08920 Tap349h10.p1c.cand.218 - score = 44.95; SMART 1 transmembrane domain at aa 227-249; 1 probable transmembrane helix predicted for TA08920 by TMHMM2.0 at aa 227-249 TA08925 Tap349h10.p1c.C.cand.17 - score = 23.28; SMART 2 transmembrane domains at aa 138-155 and 432-454; 2 probable transmembrane helices predicted for TA08925 by TMHMM2.0 at aa 138-155 and 432-454 TA08930 Tap349h10.p1c.cand.219 - score = 29.14; SMART RING (SM00184) at aa 284-334, E()=4.73e-06 TA08935 Tap349h10.p1c.C.cand.16 - score = 14.63; SMART 2 transmembrane domains at aa 5-27 and 34-56; Apicoplast targetting peptide predicted by the PlasmoAP tool; 2 probable transmembrane helices predicted for TA08935 by TMHMM2.0 at aa 5-27 and 34-56; Signal anchor predicted for TA08935 by SignalP 2.0 HMM (Signal peptide probability 0.009, signal anchor probability 0.795) with cleavage site probability 0.006 between residues 24 and 25 TA08945 Tap349h10.p1c.C.cand.15 - score = 51.07; SMART 3 RRM (SM00360) domains at aa 155-228, E()=1.13e-22; 302-376, E()=1.36e-07; 389-465, E()=9.65e-08 TA08950 Tap349h10.p1c.cand.220 - score = 85.64; SMART pfam:CAS_CSE1 (PF03378) at aa 769-1203, E()=8.50e-11 TA08955 Tap349h10.p1c.cand.221 - score = 16.68; SMART SAR (SM00178) at aa 5-191, E()=1.50e-82 TA08960 Tap349h10.p1c.cand.221 - score = 16.68; SMART RRM (SM00360) at aa 98-153, E()=8.47e-07 TA08965 Tap349h10.p1c.C.cand.14 - score = 69.83 TA08970 Tap349h10.p1c.C.cand.13 - score = 23.09 TA08975 Tap349h10.p1c.cand.222 - score = 17.65; SMART PHB (SM00244) at aa 93-258, E()=6.41e-01; 1 probable transmembrane helix predicted for TA08975 by TMHMM2.0 at aa 81-103 TA08980 SMART pfam:CRAL_TRIO_N (PF03765) at aa 111-172, E()=1.00e-01; SEC14 (SM00516) at aa 177-335, E()=9.15e-09 TA08985 Tap349h10.p1c.cand.224 - score = 59.76; SMART 1 transmembrane domain at aa 241-263; 1 probable transmembrane helix predicted for TA08985 by TMHMM2.0 at aa 241-263 TA08990 Tap349h10.p1c.C.cand.12 - score = 12.12; SMART ZnF_NFX (SM00438) at aa 1-13, E()=0.00e+00; pfam:UPF0103 (PF01875) at aa 36318, E()=3.40e-87; pfam:LIgB (PF02900) at aa 58-309, E()=4.10e-02; 1 probable transmembrane helix predicted for TA08990 by TMHMM2.0 at aa 20-39 TA09000 Tap349h10.p1c.C.cand.11 - score = 33.54; SMART S_TKc (SM00220) at aa 92-391, E()=7.14e-93 TA09005 Tap349h10.p1c.cand.225 - score = 18.85; SMART pfam:mito_carr (PF00153) at aa 97-185, E()=9.60e-13 and 195-288, E()=1.60e-07; 2 transmembrane domains at aa 13-35 and 70-92; 3 probable transmembrane helices predicted for TA09005 by TMHMM2.0 at aa 13-35, 70-92 and 193-215 TA09010 Tap349h10.p1c.cand.226 - score = 19.34; SMART BTB (SM00225) at aa 58-178, E()-3.15e-04 TA09015 Tap349h10.p1c.C.cand.10 - score = 42.30; SMART RING (SM00184) at aa 9-52, E()=2.76e-07 TA09020 1 probable transmembrane helix predicted for TA09020 by TMHMM2.0 at aa 124-141 TA09025 Tap349h10.p1c.cand.227 - score = 92.01 TA09030 Tap349h10.p1c.cand.228 - score = 137.28; SMART pfam:TPR (PF00515) at aa 313-346, E()=4.10e-04; FH2 (SM00498) at aa 1160-1602, E()=7.35e-26 TA09035 Tap349h10.p1c.C.cand.8 - score = 12.67; SMART pfam:SGS (PF05002) at aa 32-80, E()=1.20e-02 TA09040 Tap349h10.p1c.cand.229 - score = 72.42 TA09045 Tap349h10.p1c.cand.229 - score = 72.42; SMART pfam:peptidase_M17 (PF00883) at aa 214-520, E()=8.90e-124 TA09055 Tap349h10.p1c.cand.230 - score = 11.70 TA09060 Tap349h10.p1c.C.cand.7 - score = 47.44; SMART DEXDc (SM00487) at aa 207-414, E()=1.43e-54; HELICc (SM00490) at aa 451-532, E()=1.28e-33 TA09065 Tap349h10.p1c.cand.231 - score = 27.09; SMART pfam:HABP4_PAI-RBP1 (PF04774) at aa 102-258, E()=1.30e-04 TA09070 Tap349h10.p1c.C.cand.6 - score = 31.87 TA09075 Tap349h10.p1c.C.cand.6 - score = 31.87 TA09080 Tap349h10.p1c.C.cand.5 - score = 11.67; SMART 2 transmembrane domains at aa 5-27, 47-69; 2 probable transmembrane helices predicted for TA09080 by TMHMM2.0 at aa 5-27 and 47-69; Signal anchor predicted for TA09080 by SignalP 2.0 HMM (Signal peptide probability 0.069, signal anchor probability 0.899) with cleavage site probability 0.022 between residues 30 and 31 TA09085 Tap349h10.p1c.C.cand.4 - score = 14.09; SMART pfam:Sybindin (PF04099) at aa 1-150, E()=1.50e-29 TA09090 Tap349h10.p1c.cand.232 - score = 24.38 TA09095 SMART 2 transmembrane domains at aa 21-43 and 58-80; 2 probable transmembrane helices predicted for TA09095 by TMHMM2.0 at aa 21-43 and 58-80 TA09100 Tap349h10.p1c.cand.233 - score = 41.45; SMART pfam:PI3_PI4_kinase (PF00454) at aa 149-474, E()=5.20e-40 TA09105 Tap349h10.p1c.C.cand.3 - score = 40.68; SMART pfam:tRNA-synt_1 (PF00133) at aa 44-535, E()=2.10e-11 TA09110 Tap349h10.p1c.C.cand.2 - score = 58.21; SMART 5 PHD (SM00249) domains at aa 100-166, E()=8.57e+00; 243-315, E()=9.56e-02; 902-948, E()=7.76e-02; 1062-1110, E()=5.88e-02; 1323-1374, E()=1.19e-02; ZnF_NFX (SM00438) at aa 1151-1170, E()=0.00e+00 TA09115 Tap349h10.p1c.cand.234 - score = 62.38; SMART 1 transmembrane at aa 13-35; 1 probable transmembrane helix predicted for TA09115 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09115 by SignalP 2.0 HMM (Signal peptide probability 0.179, signal anchor probability 0.776) with cleavage site probability 0.092 between residues 29 and 30 TA09120 SMART 1 transmembrane domain at aa 330-352; 1 probable transmembrane helix predicted for TA09120 by TMHMM2.0 at aa 330-352 TA09125 Tap349h10.p1c.C.cand.1 - score = 18.74; SMART small_GTPase (SM00010) at aa 2-211, E()=1.73e-08; 46-238, E()=1.40e-03 TA09130 Tap349h10.p1c.cand.235 - score = 10.78 TA11045 SMART CYCLIN (SM00385) at aa 78-162, E()=3.99e-05 TA11030 Tap579b07.q1c.C.cand.2 - score = 34.16; SMART pfam:CAF1 (PF04857) at aa 8-240, E()=1.20e-116 TA11020 Tap579b07.q1c.C.cand.3 - score = 9.75; 1 probable transmembrane helix predicted for TA11020 by TMHMM2.0 at aa 7-26; Signal peptide predicted for TA11020 by SignalP 2.0 HMM (Signal peptide probability 0.985, signal anchor probability 0.014) with cleavage site probability 0.869 between residues 23 and 24 TA11015 Tap579b07.q1c.C.cand.4 - score = 43.90; SMART S1 (SM00316) at aa 598-671, 7.80e-02; 813-884, E()=6.70e+00; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA11015 by TMHMM2.0 at aa 7-29; Signal peptide predicted for TA11015 by SignalP 2.0 HMM (Signal peptide probability 0.622, signal anchor probability 0.327) with cleavage site probability 0.170 between residues 15 and 16 TA11010 Tap579b07.q1c.cand.148 - score = 52.44; SMART pfam:UPF0004 (PF00919) at aa 316-401, E()=1.70-31; Elp3 (SM00729) at aa 459-677, E()=1.32e-26; 1 probable transmembrane helix predicted for TA11010 by TMHMM2.0 at aa 7-29 TA11005 Tap579b07.q1c.C.cand.5 - score = 15.89; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal peptide predicted for TA11005 by SignalP 2.0 HMM (Signal peptide probability 0.909, signal anchor probability 0.064) with cleavage site probability 0.808 between residues 20 and 21 TA11000 Tap579b07.q1c.cand.147 - score = 61.59; SMART 9 transmembrane domains at aa 585-607, 614-636, 651-668, 677-699, 719-741, 754-772, 811-833, 854-876 and 886-908; 9 probable transmembrane helices predicted for TA11000 by TMHMM2.0 at aa 585-607, 614-636, 651-668, 677-699, 719-741, 754-772, 811-833, 854-876 and 886-908 TA10995 Tap579b07.q1c.cand.146 - score = 89.07; SMART pfam:tRNA-synt_1 (PF00133) at aa 13-799, E()=1.10e-06 TA10990 Tap579b07.q1c.C.cand.6 - score = 10.11; SMART 3 pfam:mito_carr (PF00153) at aa 24-118, E()=2.00e-03; 119-217, E()=5.40e-04; 221-313, E()=7.50e-05 TA10985 Tap579b07.q1c.cand.145 - score = 152.29; SMART pfam:Cullin (PF00888) at aa 1-668, E()=6.30e-04 TA10980 Tap579b07.q1c.cand.145 - score = 152.29; SMART 1 transmembrane domain at aa 17-39; 1 probable transmembrane helix predicted for TA10980 by TMHMM2.0 at aa 17-39 TA10975 Tap579b07.q1c.cand.145 - score = 152.29 TA10960 SMART pfam:HesB-like (PF01521) at aa 201-293, E()=7.40e-11; 1 probable transmembrane helix predicted for TA10960 by TMHMM2.0 at aa 107-129 TA10955 Tap579b07.q1c.cand.144 - score = 49.40; SMART Pept_C1 (SM00645) at aa 219-467, E()=3.24e-12; Signal peptide predicted for TA10955 by SignalP 2.0 HMM (Signal peptide probability 0.913, signal anchor probability 0.000) with cleavage site probability 0.697 between residues 15 and 16; GPI-Anchor Signal predicted for TA10955 by DGPI v2.04, no cleavage site predicted TA10950 Tap579b07.q1c.cand.143 - score = 40.41; SMART pfam:RICH (PF05062) at aa 386-468, E()=8.30e-02 TA10945 Tap579b07.q1c.C.cand.9 - score = 14.51; SMART pfam:UCR_UQCRX_QCR9 (PF05365) at aa 38-94, E()=3.30e-03; 1 probable transmembrane helix predicted for TA10945 by TMHMM2.0 at aa 52-71 TA10940 Tap579b07.q1c.cand.142 - score = 25.73 TA10935 Tap579b07.q1c.C.cand.10 - score = 22.61 TA10925 Tap579b07.q1c.cand.140 - score = 30.20; SMART 1 transmembrane domain at aa 21-43; pfam:adh_short (PF00106) at aa 104-379, E()=3.30e-26; 1 probable transmembrane helix predicted for TA10925 by TMHMM2.0 at aa 21-43; Signal anchor predicted for TA10925 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.978) with cleavage site probability 0.000 between residues 33 and 34 TA10920 Tap579b07.q1c.cand.139 - score = 31.51; SMART 2 transmembrane domains at aa 53-75 and 96-118; pfam:adh_short (PF00106) at aa 137-398, E()=1.20e-20; 2 probable transmembrane helices predicted for TA10920 by TMHMM2.0 at aa 53-75 and 96-118 TA10915 Tap579b07.q1c.cand.138 - score = 49.29; SMART pfam:PK (PF00224) at aa 34-382, E()=2.50e-187; pfam:PK_C (PF02887) at aa 396-511, E()=8.00e-23 TA10910 Tap579b07.q1c.cand.137 - score = 53.70; SMART 3 pfam:Kelch (PF01344) domains at aa 119-168, E()=1.80e-02; 173-222, E()=8.30e-04; 372-421, E()=5.20e-05 TA10905 Tap579b07.q1c.cand.136 - score = 60.57; SMART 9 ANK (SM00248) domains at aa 556-585, E()=5.19e+02; 589-619, E()=9.92e+02; 622-651, E()=7.71e-02; 658-687, E()=2.32e-05; 724-753, E()=1.19e+03; 758-787, E()=3.36e+02; 791-820, E()=5.62e-04; 824-853, E()=9.05e-08; 858-888, E()=1.23e+00 TA10900 Tap579b07.q1c.C.cand.11 - score = 10.53; SMART pfam:NifU-like (PF01106) at aa 95-165, E()=3.70e-23 TA10890 Tap579b07.q1c.C.cand.12 - score = 44.76; SMART pfam:GTP_EFTU (PF00009) at aa 95-328, E()=2.40e-30 TA10885 Tap579b07.q1c.C.cand.13 - score = 149.33; SMART overlapping domains; PHD (SM00249) at aa 7-69, E()=2.83e-04; 82-129, E()=4.22e-12; 157-217, E()=6.50e-04; 1403-1462, E()=7.24e-02; 1463-1530, E()=1.71e+01; RING (SM00184) at aa 8-68, E()=1.50e+00; 83-128, E()=1.45e-01; 158-216, E()=4.62e+00; ZnF_NFX (SM00438) at aa 158-175, E()=0.00e+00; DEXDc (SM00487) at aa 340-542, E()=1.23e-21; HELICc (SM00490) at aa 1011-1095, E()=1.83e-20 TA10880 SMART 1 transmembrane domain at aa 182-204; 1 probable transmembrane helix predicted for TA10880 by TMHMM2.0 at aa 182-204; Signal peptide predicted for TA10880 by SignalP 2.0 HMM (Signal peptide probability 0.968, signal anchor probability 0.000) with cleavage site probability 0.748 between residues 17 and 18 TA10875 SMART pfam:proteasome (PF00227) at aa 20-205, E()=1.30e-29 TA10870 Tap579b07.q1c.C.cand.15 - score = 33.72 TA10865 Tap579b07.q1c.cand.133 - score = 26.83; SMART 10 transmembrane domains at aa 21-40, 109-131, 143-165, 170-192, 205-227, 330-352, 365-387, 442-464, 483-505 and 515-537; 10 probable transmembrane helices predicted for TA10865 by TMHMM2.0 at aa 21-40, 109-131, 143-165, 170-192, 205-227, 330-352, 365-387, 442-464, 483-505 and 515-537; Signal anchor predicted for TA10865 by SignalP 2.0 HMM (Signal peptide probability 0.013, signal anchor probability 0.666) with cleavage site probability 0.003 between residues 33 and 34 TA10850 Tap579b07.q1c.cand.132 - score = 44.89; SMART pfam:isodh (PF00180) at aa 65-453, E()=3.00e-81 TA10845 SMART pfam:Metallophos (PF00149) at aa 264-524, E()=2.40e-15; pfam:Mre11_DNA_bind (PF04152) at aa 525-738, E()=2.00e-14 TA10840 Tap579b07.q1c.C.cand.19 - score = 67.17; SMART pfam:tRNA-synt_2d (PF02409) at aa 248-504, E()=1.40e-98 TA10835 Tap579b07.q1c.cand.131 - score = 15.98; SMART pfam:TBCA (PF02970) at aa 6-94, E()=4.50e-04 TA10830 SMARTpfam:Acetyltransf (PF00583) at aa 51-133, E()=1.80e-14 TA10825 2 probable transmembrane helices predicted for TA10825 by TMHMM2.0 at aa 5-27 and 73-92; Signal peptide predicted for TA10825 by SignalP 2.0 HMM (Signal peptide probability 0.967, signal anchor probability 0.001) with cleavage site probability 0.514 between residues 18 and 19 TA10815 Tap579b07.q1c.cand.126 - score = 93.50; SMART FN2 (SM00059) at aa 147-200, E()=6.51e-01; 1 probable transmembrane helix predicted for TA10815 by TMHMM2.0 at aa 7-26 TA10810 Tap579b07.q1c.cand.125 - score = 16.35 TA10805 Tap579b07.q1c.cand.124 - score = 8.33; SMART pfam:mito_carrier (PF00153) at aa 175-259, E()=7.80e-02 TA10800 Tap579b07.q1c.C.cand.20 - score = 15.89; SMART 2 transmembrane domains at aa 59-81 and 118-140; pfam:PAP2 (PF01569) at aa 166-278, E()=8.30e-02; 6 probable transmembrane helices predicted for TA10800 by TMHMM2.0 at aa 59-81, 118-140, 147-169, 184-206, 227-246 and 251-270 TA10795 Tap579b07.q1c.C.cand.21 - score = 79.92; SMART 2 transmembrane domains at aa 59-81 and 114-133; pfam:PAP2 (PF01569) at aa 158-271, E()=7.10e-02; 6 probable transmembrane helices predicted for TA10795 by TMHMM2.0 at aa 59-81, 114-133, 146-168, 197-219, 224-243 and 253-275 TA10790 SMART pfam:AAA (SM00382) at aa 256-386, E()=2.17e-03 TA10785 Tap579b07.q1c.cand.123 - score = 15.57; SMART 5 transmembrane domains at aa 60-79, 99-121, 126-143, 148-170 and 177-199; 5 probable transmembrane helices predicted for TA10785 by TMHMM2.0 at aa 60-79, 99-121, 126-143, 148-170 and 177-199 TA10780 Tap579b07.q1c.C.cand.22 - score = 12.70; SMART 1 transmembrane domain at aa 24-46; 1 probable transmembrane helix predicted for TA10780 by TMHMM2.0 at aa 24-46 TA10775 Tap579b07.q1c.C.cand.23 - score = 10.51; SMART pfam:HesB-like (PF01521) at aa 53-159, E()=4.30e-22 TA10770 Tap579b07.q1c.cand.122 - score = 33.82 TA10765 Tap579b07.q1c.C.cand.24 - score = 9.14 TA10760 Tap579b07.q1c.cand.121 - score = 43.18; SMART pfam:Sec1 (PF00995) at aa 95-757, E()=1.70e-06 TA10755 Tap579b07.q1c.cand.120 - score = 24.78; Signal peptide predicted for TA10755 by SignalP 2.0 HMM (Signal peptide probability 0.813, signal anchor probability 0.000) with cleavage site probability 0.804 between residues 22 and 23 TA10740 Tap579b07.q1c.cand.119 - score = 26.26; Signal peptide predicted for TA10740 by SignalP 2.0 HMM (Signal peptide probability 0.976, signal anchor probability 0.002) with cleavage site probability 0.295 between residues 25 and 26; GPI-Anchor Signal predicted for TA10740 by DGPI v2.04 with cleavage site probability 0.156 near 297 TA10735 Tap579b07.q1c.cand.118 - score = 36.27; SMART ZnF_GATA (SM00401) at aa 410-458, E()=3.23e-05; 1 probable transmembrane helix predicted for TA10735 by TMHMM2.0 at aa 38-57 TA10730 Tap579b07.q1c.C.cand.25 - score = 28.18; SMART RAB (SM00175) at aa 11-178, E()=1.04e-44; small_GTPase (SM00010) at aa 27-202, E()=1.25e-01 TA10725 Tap579b07.q1c.cand.117 - score = 60.73; SMART STYKc (SM00221) at aa 326-796, E()=5.34e-01 TA10720 Tap579b07.q1c.C.cand.26 - score = 78.86; SMART HATPase_c (SM00387) at aa 152-314, E()=1.23e-02; pfam:HSP90 (PF00183) at aa 316-839, E()=4.90e-137; Apicoplast targetting peptide predicted by the PlasmoAP tool; 1 probable transmembrane helix predicted for TA10720 by TMHMM2.0 at aa 21-40; Signal anchor predicted for TA10720 by SignalP 2.0 HMM (Signal peptide probability 0.094, signal anchor probability 0.892) with cleavage site probability 0.042 between residues 39 and 40 TA10715 Tap579b07.q1c.C.cand.27 - score = 55.70 TA10710 SMART RPOLA_N (SM00663) at aa 304-610, E()=1.84e-156; pfam:RNA_pol_Rpb1_4 (PF050000) at aa 814-922, E()=1.80e-42; pfam:RNA_pol_Rpb1_5 (PF04998) at aa 929-1600, E()=2.00e-64 TA10705 Tap579b07.q1c.cand.116 - score = 28.62; Signal peptide predicted for TA10705 by SignalP 2.0 HMM (Signal peptide probability 0.982, signal anchor probability 0.000) with cleavage site probability 0.826 between residues 19 and 20 TA10700 Tap579b07.q1c.C.cand.30 - score = 57.14; SMART pfam:Ribosomal_S15 (PF00312) at aa 173-259, E()=7.60e-11 TA10695 Tap579b07.q1c.C.cand.30 - score = 57.14 TA10680 Tap579b07.q1c.C.cand.31 - score = 12.22; SMART 1 transmembrane domain at aa 59-81; 1 probable transmembrane helix predicted for TA10680 by TMHMM2.0 at aa 59-81 TA10675 Tap579b07.q1c.C.cand.32 - score = 8.21; SMART ZnF_AN1 (SM00154) at aa 27-73, E()=7.53e-03 TA10670 Tap579b07.q1c.cand.115 - score = 44.55; SMART DEXDc (SM00487) at aa 72-474, E()=5.53e-06; HELICc (SM00490) at aa 551-626, E()=1.50e-07 TA10665 Tap579b07.q1c.C.cand.33 - score = 21.48 TA10660 Tap579b07.q1c.C.cand.34 - score = 11.76; SMART 10 transmembrane domains at aa 16-38, 61-83, 90-112, 122-141, 148-170, 180-202, 254-276, 286-308, 321-343 and 358-380; 10 probable transmembrane helices predicted for TA10660 by TMHMM2.0 at aa 16-38, 61-83, 90-112, 122-141, 148-170, 180-202, 254-276, 286-308, 321-343 and 358-380 TA10655 10 probable transmembrane helices predicted for TA10655 by TMHMM2.0 at aa 13-35, 62-81, 102-119, 129-151, 187-209, 668-690, 703-722, 737-759, 766-788 and 810-828 TA10650 Tap579b07.q1c.C.cand.36 - score = 22.35; SMART 10 transmembrane domains at aa 32-51, 66-88, 100-122, 127-149, 156-178, 193-212, 316-335, 350-372, 385-407 and 427-449; 10 probable transmembrane helices predicted for TA10650 by TMHMM2.0 at aa 32-51, 66-88, 100-122, 127-149, 156-178, 193-212, 316-335, 350-372, 385-407 and 427-449 TA10645 Tap579b07.q1c.C.cand.37 - score = 18.55; SMART 11 transmembrane domains at aa 24-46, 80-102, 107-129, 138-160, 199-221, 300-322, 337-356, 368-390, 410-432, 445-467 and 482-504; 11 probable transmembrane helices predicted for TA10645 by TMHMM2.0 at aa 24-46, 80-102, 107-129, 138-160, 199-221, 300-322, 337-356, 368-390, 410-432, 445-467 and 482-504; Signal anchor predicted for TA10645 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.926) with cleavage site probability 0.000 between residues 47 and 48 TA10640 Tap579b07.q1c.C.cand.38 - score = 17.60; SMART 8 transmembrane domains at aa 65-87, 92-114, 121-143, 184-206, 268-290, 300-318, 331-353 and 373-395; 8 probable transmembrane helices predicted for TA10640 by TMHMM2.0 at aa 65-87, 92-114, 121-143, 184-206, 268-290, 300-318, 331-353 and 373-395 TA10635 SMART 1 transmembrane domain at aa 12-31; 1 probable transmembrane helix predicted for TA10635 by TMHMM2.0 at aa 12-31 TA10630 Tap579b07.q1c.C.cand.39 - score = 25.01; SMART S_TKc (SM00220) at aa 127-412, E()=1.03e-75 TA10625 Tap579b07.q1c.C.cand.40 - score = 35.83; SMART pfam:CoA_binding (PF02629) at aa 32-150, E()=1.40e-58; pfam:ligase-CoA (PF00549) at aa 170-318, E()=3.20e-60 TA10620 SMART pfam:UPF0027 (PF01139) at aa 34-515, E()=1.00e-241 TA10615 Tap579b07.q1c.C.cand.42 - score = 28.14; SMART 1 transmembrane domain at aa 5-27; 1 probable transmembrane helix predicted for TA10615 by TMHMM2.0 at aa 5-27 TA10610 Tap579b07.q1c.cand.111 - score = 40.31; SMART AAA (SM00382) at aa 101-403, E()=9.65e-10 TA10605 Tap579b07.q1c.C.cand.43 - score = 49.36; SMART CysPc (SM00230) at aa 35-406, E()=3.49e-13 TA10600 Tap579b07.q1c.cand.110 - score = 251.52; SMART pfam:FAT (PF02259) at aa 2595-3205, E()=7.80e-05; PIKc (SM00146) at aa 3491-3865, E()=8.43e-02 TA10595 Tap579b07.q1c.C.cand.44 - score = 32.50; SMART 7 WD40 (SM00320) domains at aa 198-237, E()=5.26e-08; 240-279, E()=1.49e-07; 282-321, E()=1.96e-07; 324-363, E()=6.04e-08; 368-404, E()=4.02e-04; 407-448, E()=4.38e-05; 460-498, E()=1.79e-01 TA10590 Tap579b07.q1c.cand.109 - score = 9.36; SMART 4 transmembrane domains at 13-35, 40-62, 75-97 and 112-134; 4 probable transmembrane helices predicted for TA10590 by TMHMM2.0 at aa 13-35, 40-62, 75-97 and 112-134 TA10580 Tap579b07.q1c.cand.108 - score = 45.19; SMART 2 KH (SM00322) domains at aa 269-343, E()=8.52e-02; 362-433, E()=7.42e-01 TA10570 Tap579b07.q1c.cand.106 - score = 37.48; SMART 1 transmembrane domain at aa 97-119; 2 probable transmembrane helices predicted for TA10570 by TMHMM2.0 at aa 7-29 and 97-119 TA10565 Tap579b07.q1c.cand.105 - score = 9.84; SMART RING (SM00184) at aa 30-90, E()=1.11e-01; ZnF_NFX (SM00438) at aa 33-46, E()=0.00e+00 TA10560 Tap579b07.q1c.C.cand.45 - score = 27.45; SMART 4 WD40 (SM00320) domains at aa 52-95, E()=3.98e+00; 239-278, E()=2.48e-04; 282-327, E()=7.13e+00; 355-395, E()=5.11e+01 TA10555 SMART 5 transmembrane domains at aa 170-192, 205-239, 317-339, 346-368 and 388-410; 5 probable transmembrane helices predicted for TA10555 by TMHMM2.0 at aa 170-192, 205-239, 317-339, 346-368 and 388-410 TA10550 Tap579b07.q1c.C.cand.47 - score = 53.95; SMART pfam:efhand (PF00036) at aa 477-505, E()=3.40e-06 TA10545 Tap579b07.q1c.C.cand.48 - score = 31.86; SMART H4 (SM00417) at aa 16-90, E()=1.33e-26 TA10540 Tap579b07.q1c.C.cand.48 - score = 31.86; SMART pfam:TIM (PF00121) at aa 118-365, E()=8.70e-21; 1 probable transmembrane helix predicted for TA10540 by TMHMM2.0 at aa 21-43 TA10535 Tap579b07.q1c.C.cand.49 - score = 10.12; SMART H4 (SM00417) at aa 16-90, E()=1.33e-24 TA10525 SMART STYKc (SM00221) at aa 58-345, E()=6.42e-04; 74-363, E()=3.84e-43 TA10520 Tap579b07.q1c.cand.103 - score = 29.42; SMART 3 EFh (SM00054) domains at aa 55-83, E()=7.52e-06; 91-119, E()=1.10e+01; 128-155, E()=1.55e+01 TA10510 Tap579b07.q1c.cand.102 - score = 51.72; SMART 5 EFh (SM00054) domains at aa 45-73, E()=7.93e-01; 81-109, E()=6.16e-02; 121-149, E()=5.53e+00; 158-186, E()=3.25e-01 and 192-220, E()=2.04e+00; concerned of calling too much for a function; Signal peptide predicted for TA10510 by SignalP 2.0 HMM (Signal peptide probability 0.706, signal anchor probability 0.000) with cleavage site probability 0.449 between residues 21 and 22 TA10505 SMART 9 transmembrane domains at aa 21-40, 73-90, 182-204, 219-238, 492-514, 524-546, 558-580, 585-607 and 628-650; 9 probable transmembrane helices predicted for TA10505 by TMHMM2.0 at aa 21-40, 73-90, 182-204, 219-238, 492-514, 524-546, 558-580, 585-607 and 628-650 TA10500 Tap579b07.q1c.cand.101 - score = 70.63; SMART pfam:HSP70 (PF00012) at aa 38-638, E()=0.00e+00; pfam:Hydantoinase_A (PF01968) at aa 157-411, E()=7.20e-02; pfam:UVR (PF02151) at aa 590-628, E()=1.00e-01; Signal peptide predicted for TA10500 by SignalP 2.0 HMM (Signal peptide probability 0.827, signal anchor probability 0.000) with cleavage site probability 0.784 between residues 26 and 27 TA10495 Tap579b07.q1c.cand.100 - score = 11.57 TA10490 Tap579b07.q1c.C.cand.51 - score = 20.16 TA10485 Tap579b07.q1c.cand.99 - score = 24.21 TA10480 Tap579b07.q1c.cand.98 - score = 50.55; SMART DnaJ (SM00271) at aa 22-77, E()=5.14e-25; Signal peptide predicted for TA10480 by SignalP 2.0 HMM (Signal peptide probability 0.847, signal anchor probability 0.023) with cleavage site probability 0.449 between residues 20 and 21 TA10470 Tap579b07.q1c.cand.98 - score = 50.55; SMART 2 transmembrane domains at aa 59-81 and 85-104; pfam:Acetyltransf (PF00583) at aa 198-276, E()=3.90e-10; 2 probable transmembrane helices predicted for TA10470 by TMHMM2.0 at aa 59-81 and 85-104 TA10465 Tap579b07.q1c.C.cand.52 - score = 26.60; SMART pfam:PGAM (PF00300) at aa 2-222, E()=1.50e-81 TA10460 Tap579b07.q1c.cand.97 - score = 111.32 TA10455 Tap579b07.q1c.C.cand.53 - score = 16.65 TA10450 Tap579b07.q1c.cand.96 - score = 70.12; SMART 1 transmembrane domain at aa 12-31; SEL1 (SM00671) at aa 86-125, E()=8.19e-02; 126-163, E()=1.75e-01; 289-324, E()=1.25e-06; 325-367, E()=6.76e+00; 410-445, E()=3.67e+01; 1 probable transmembrane helix predicted for TA10450 by TMHMM2.0 at aa 12-31; Signal anchor predicted for TA10450 by SignalP 2.0 HMM (Signal peptide probability 0.005, signal anchor probability 0.886) with cleavage site probability 0.002 between residues 27 and 28 TA10445 Tap579b07.q1c.cand.96 - score = 70.12 TA10440 Tap579b07.q1c.C.cand.54 - score = 61.98; SMART pfam:SART-1 (PF003343) at aa 1-522, E()=4.70e-04 TA10435 SMART pfam:BSD (PF03909) at aa 212-260, E()=3.10e-03 TA10425 Tap579b07.q1c.C.cand.55 - score = 47.87; SMART pfam:enolase_N (PF03952) at aa 3-139, E()=9.70e-67; pfam:enolase (PF00113) at aa 149-441, E()=1.80e-199 TA10415 Tap579b07.q1c.C.cand.56 - score = 22.74 TA10410 Tap579b07.q1c.C.cand.57 - score = 115.92; SMART pfam:Yeast_VAR1 (PF05316) at aa 844-1154, E()=5.60e-02 TA10405 Tap579b07.q1c.C.cand.58 - score = 28.68; SMART pfam:Maf (PF02545) at aa 19-243, E()=1.20e-20 TA10400 Tap579b07.q1c.C.cand.59 - score = 159.19 TA10395 SMART 12 transmembrane domains at aa 50-72, 335-357, 372-394, 448-470, 490-512, 524-543, 558-580, 668-687, 910-932, 966-988, 1014-1036 and 1057-1079; 12 probable transmembrane helices predicted for TA10395 by TMHMM2.0 at aa 50-72, 335-357, 372-394, 448-470, 490-512, 524-543, 558-580, 668-687, 910-932, 966-988, 1014-1036 and 1057-1079 TA10390 Tap579b07.q1c.C.cand.60 - score = 48.72; SMART DEXDc (SM00487) at aa 117-376, E()=2.42e-11; pfam:helicase_C (PF00271) at aa 434-528, E()=7.90e-03 TA10385 Tap579b07.q1c.C.cand.61 - score = 15.89; SMART pfam:60s_ribosomal (PF00428) at aa 32-115, E()=1.40e-20 TA10380 Tap579b07.q1c.C.cand.62 - score = 16.76; SMART pfam:cytochrome_c (PF00034) at aa 19-139, E()=3.70e-05 TA10375 Tap579b07.q1c.cand.93 - score = 30.24 TA10370 Tap579b07.q1c.C.cand.63 - score = 52.28; SMART pfam:ATP-synt_ab_N (PF02874) at aa 41-96, E()=2.80e-12; pfam:ATP-synt_ab (PF00006) at aa 283-475, E()=2.00e-79; pfam:ATP-synt_ab-C (PF00306) at aa 483-630, E()=1.50e-36; 1 probable transmembrane helix predicted for TA10370 by TMHMM2.0 at aa 21-43 TA10360 Tap579b07.q1c.cand.92 - score = 24.53 TA10350 Tap579b07.q1c.cand.91 - score = 21.96 TA10345 Tap579b07.q1c.C.cand.65 - score = 24.90; SMART 1 transmembrane domain at aa 365-387; 1 probable transmembrane helix predicted for TA10345 by TMHMM2.0 at aa 365-387; GPI-Anchor Signal predicted for TA10345 by DGPI v2.04, no cleavage site predicted TA10340 Tap579b07.q1c.cand.90 - score = 53.65; SMART pfam:E1_dehydrog (PF00676) at aa 110-411, E()=5.10e-94 TA10335 Tap579b07.q1c.C.cand.66 - score = 21.19 TA10330 Tap579b07.q1c.cand.89 - score = 17.84 TA10325 Tap579b07.q1c.C.cand.67 - score = 35.31 TA10320 Tap579b07.q1c.C.cand.68 - score = 12.11; SMART RRM (SM00360) at aa 11-84, E()=2.73e-07 TA10315 Tap579b07.q1c.cand.88 - score = 23.19; SMART pfam:SDF (PF00375) at aa 32-452, E()=5.40e-06; 10 probable transmembrane helices predicted for TA10315 by TMHMM2.0 at aa 23-45, 71-93, 106-128, 194-213, 233-255, 270-292, 305-324, 344-366, 378-400 and 404-426; Signal anchor predicted for TA10315 by SignalP 2.0 HMM (Signal peptide probability 0.002, signal anchor probability 0.944) with cleavage site probability 0.001 between residues 47 and 48 TA10300 Tap579b07.q1c.cand.87 - score = 23.49; SMART 6 transmembrane domains at aa 24-46, 67-89, 117-135, 213-235, 250-272 and 297-319; 6 probable transmembrane helices predicted for TA10300 by TMHMM2.0 at aa 24-46, 67-89, 117-135, 213-235, 250-272 and 297-319 TA10295 Tap579b07.q1c.C.cand.69 - score = 49.71; SMART DEXDc (SM00487) at aa 22-262, E()=2.91e-23; HELICc (SM00490) at aa 400-480, E()=1.73e-16 TA10290 Tap579b07.q1c.cand.86 - score = 24.44; SMART pfam:YEATS (PF03366) at aa 12-117, E()=1.20e-27 TA10285 Tap579b07.q1c.C.cand.70 - score = 41.31; Signal peptide predicted for TA10285 by SignalP 2.0 HMM (Signal peptide probability 0.998, signal anchor probability 0.000) with cleavage site probability 0.859 between residues 17 and 18 TA10280 Tap579b07.q1c.C.cand.71 - score = 65.21; SMART pfam:V_ATPase_sub_a (PF01496) at aa 25-924, E()=2.30e-103; 6 probable transmembrane helices predicted for TA10280 by TMHMM2.0 at aa 471-493, 513-535, 599-621, 628-650, 696-718 and 864-886 TA10275 Tap579b07.q1c.cand.85 - score = 37.03; SMART pfam:MMR_HSR1 (PF01926) at aa 81-401, E()=3.40e-05; pfam:GTP_EFTU (PF00009) at aa 196-388, E()=5.00e-02; Signal peptide predicted for TA10275 by SignalP 2.0 HMM (Signal peptide probability 0.841, signal anchor probability 0.000) with cleavage site probability 0.813 between residues 16 and 17 TA10270 Tap579b07.q1c.cand.84 - score = 18.59; SMART pfam:Ribosomal_L3 (PF00297) at aa 95-291, E()=1.30e-31 TA10265 Tap579b07.q1c.cand.83 - score = 33.18 TA10260 Tap579b07.q1c.C.cand.72 - score = 63.22; SMART pfam:Nucleoporin2 (PF04096) at aa 864-1026, E()=7.70e-10 TA10255 Tap579b07.q1c.C.cand.73 - score = 9.75; SMART pfam:Ribosomal_S21e (PF01249) at aa 1-81, E()=4.40e-30 TA10250 Tap579b07.q1c.cand.82 - score = 8.00; SMART pfam:Img2 (PF05046) at aa 31-94, E()=1.80e-05 TA10245 Tap579b07.q1c.cand.81 - score = 68.97; SMART pfam:Peptidase_M24 (PF00557) at aa 356-595, E()=3.40e-07 TA10240 Tap579b07.q1c.C.cand.74 - score = 86.03; SMART PINT (SM00088) at aa 784-872, E()=5.08e-06 TA10235 SMART pfam:tRNA-synt_1 (PF00133) at aa 41-666, E()=8.60e-221 TA10230 Tap579b07.q1c.C.cand.75 - score = 71.56; SMART 1 transmembrane domain at aa 12-31; 1 probable transmembrane helix predicted for TA10230 by TMHMM2.0 at aa 12-31; Signal peptide predicted for TA10230 by SignalP 2.0 HMM (Signal peptide probability 0.828, signal anchor probability 0.155) with cleavage site probability 0.739 between residues 30 and 31 TA10225 Tap579b07.q1c.cand.79 - score = 28.42 TA10220 Tap579b07.q1c.C.cand.77 - score = 43.96 TA10215 Tap579b07.q1c.C.cand.78 - score = 34.30; SMART pfam:RimM (PF01782) at aa 93-181, E()=2.80e-20 TA10210 Tap579b07.q1c.C.cand.78 - score = 34.30; SMART ZnF_C2H2 (SM00355) at aa 68-90, E()=2.67e-01 TA10205 Tap579b07.q1c.cand.78 - score = 28.57 TA10190 Tap579b07.q1c.cand.77 - score = 46.44 TA10185 Tap579b07.q1c.cand.76 - score = 26.07; SMART pfam:Ribosomal_S2 (PF00318) at aa 18-186, E()=1.10e-75 TA10180 Tap579b07.q1c.cand.75 - score = 11.82 TA10175 Tap579b07.q1c.C.cand.79 - score = 13.80; SMART 1 transmembrane domain at aa 138-160; 1 probable transmembrane helix predicted for TA10175 by TMHMM2.0 at aa 138-160 TA10170 SMART RRM (SM00360) at aa 168-243, E()=6.45e-18; SWAP (SM00064) at aa 291-366, E()=3.61e-01; RPR (SM00582) at aa 424-559, E()=4.43e-05 TA10165 Tap579b07.q1c.C.cand.82 - score = 47.37; SMART 10 transmembrane domains at aa 12-34, 49-71, 92-114, 119-141, 148-170, 185-207, 278-300, 755-777, 797-819 and 824-846; 10 probable transmembrane helices predicted for TA10165 by TMHMM2.0 at aa 12-34, 49-71, 92-114, 119-141, 148-170, 185-207, 278-300, 755-777, 797-819 and 824-846 TA10160 Tap579b07.q1c.cand.73 - score = 14.34; SMART pfam:Ribosomal_S27 (PF01599) at aa 110-155, E()=1.40e-25 TA10155 SMART pfam:WW (PF00397) at aa 184-215, E()=1.40e-02 TA10150 SMART pfam:NUDIX (PF00293) at aa 85-224, E()=8.50e-05 TA10145 Tap579b07.q1c.C.cand.84 - score = 88.73; SMART pfam:SAC3_GANP (PF03399) at aa 101-392, E()=1.60e-08 TA10140 Tap579b07.q1c.C.cand.84 - score = 88.73 TA10135 Tap579b07.q1c.C.cand.85 - score = 30.22 TA10130 Tap579b07.q1c.cand.71 - score = 17.58; SMART pfam:Glycos_transf_1 (PF00534) at aa 189-357, E()=4.40e-34 TA10125 Tap579b07.q1c.cand.70 - score = 32.63 TA10120 Tap579b07.q1c.cand.69 - score = 62.92; SMART PINT (SM00088) at aa 491-574. E()=1.88e-18 TA10115 Tap579b07.q1c.cand.69 - score = 62.92 TA10110 Tap579b07.q1c.C.cand.86 - score = 10.61; SMART pfam:DER1 (PF04511) at aa 14-212, E()=2.80e-34; 5 probable transmembrane helices predicted for TA10110 by TMHMM2.0 at aa 20-37, 57-79, 91-113, 117-139 and 159-181; Signal anchor predicted for TA10110 by SignalP 2.0 HMM (Signal peptide probability 0.016, signal anchor probability 0.950) with cleavage site probability 0.009 between residues 39 and 40 TA10105 Tap579b07.q1c.cand.68 - score = 19.64; SMART pfam:DUF155 (PF02582) at aa 1-210, E()=3.90e-02 TA10100 Tap579b07.q1c.cand.67 - score = 104.10; SMART 2 RRM (SM00360) at aa 128-199, E()=3.16e-12; 212-283, E()=2.13e-18 TA10095 Tap579b07.q1c.cand.67 - score = 104.10; SMART UBQ (SM00213) at aa 8-78, E()=2.01e-09; pfam:UCH (PF00443) at aa 111-531, E()=4.40e-47 TA10080 Tap579b07.q1c.C.cand.87 - score = 28.50 TA10075 Tap579b07.q1c.cand.66 - score = 30.90; SMART pfam:Peptidase_M24 (PF00557) at aa 87-327, E()=7.30e-46 TA10070 Tap579b07.q1c.C.cand.88 - score = 26.00; SMART pfam:efhand (PF00036) at aa 16-44, E()=3.40e-05 TA10065 SMART KOW (SM00739) at aa 53-80, E()=4.73e-05 TA10060 Tap579b07.q1c.cand.64 - score = 34.20; SMART 4 WD40 (SM00320) domains at aa 66-106, E()=2.82e-08; 115-155, E()=1.26e-05; 160-196, E()=3.82e+01; 199-246, E()=9.21e+00; 1 probable transmembrane helix predicted for TA10060 by TMHMM2.0 at aa 39-61; Signal anchor predicted for TA10060 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.992) with cleavage site probability 0.000 between residues 57 and 58 TA10055 Tap579b07.q1c.C.cand.89 - score = 86.32; Signal peptide predicted for TA10055 by SignalP 2.0 HMM (Signal peptide probability 0.840, signal anchor probability 0.000) with cleavage site probability 0.184 between residues 31 and 32 TA10050 Tap579b07.q1c.C.cand.89 - score = 86.32; SMART DEXDc (SM00487) at aa 97-310, E()=5.00e-45; HELICc (SM00490) at aa 347-428, E()=1.02e-27 TA10045 Tap579b07.q1c.C.cand.90 - score = 68.29 TA10040 Tap579b07.q1c.cand.62 - score = 25.80; SMART pfam:tRNA-synt_1b (PF00579) at aa 51-329, E()=1.10e-39 TA10035 Tap579b07.q1c.C.cand.91 - score = 98.51; SMART STYKc (SM00221) at aa 682-976, E()=2.97e-07 TA10020 Tap579b07.q1c.C.cand.92 - score = 51.49; SMART 2 transmembrane domains at 187-209 and 230-249; pfam:DUF221 (PF02714) at 441-819, E()=2.40e-05; 8 probable transmembrane helices predicted for TA10020 by TMHMM2.0 at aa 7-29, 187-209, 230-249, 505-527, 548-570, 574-596, 609-631 and 708-730 TA10015 Tap579b07.q1c.cand.60 - score = 9.09 TA10005 Tap579b07.q1c.cand.59 - score = 165.13; SMART pfam:Vps26 (PF03643) at aa 3-277, E()=8.20e-110 TA10000 Tap579b07.q1c.cand.59 - score = 165.13; SMART 2 transmembrane domains at aa 349-371 and 378-400; 2 probable transmembrane helices predicted for TA10000 by TMHMM2.0 at aa 349-371 and 378-400 TA09995 Tap579b07.q1c.C.cand.93 - score = 65.11; SMART DEXDc2 (unknown) at aa 14-319, E()=2.48e-49; HELICc2 (unknown) at aa 648-808, E()=4.97e-40 TA09990 Tap579b07.q1c.cand.58 - score = 37.73; SMART 1 transmembrane domain at aa 178-200; 1 probable transmembrane helix predicted for TA09990 by TMHMM2.0 at aa 178-200 TA09985 Tap579b07.q1c.cand.57 - score = 80.63 TA09980 SMART pfam:MMR_HSR1 (PF01926) at aa 13-306, E()=5.60e-05 TA09965 Tap579b07.q1c.cand.56 - score = 43.78 TA09960 Tap579b07.q1c.cand.55 - score = 40.53; SMART STYKc (SM00221) at aa 30-457, E()=9.36e-08 TA09955 Tap579b07.q1c.cand.54 - score = 26.90; SMART pfam:DUF343 (PF03966) at aa 1-115, E()=1.40e-03 TA09950 SMART pfam:PRP38 (PF03371) at aa 124-306, E()=5.00e-12; 1 transmembrane domain at aa 496-513; 1 probable transmembrane helix predicted for TA09950 by TMHMM2.0 at aa 496-513 TA09945 Tap579b07.q1c.C.cand.95 - score = 31.83; SMART 1 transmembrane domain at aa 242-264; 1 probable transmembrane helix predicted for TA09945 by TMHMM2.0 at aa 242-264 TA09940 Tap579b07.q1c.cand.52 - score = 70.43; SMART 1 transmembrane domain at aa 7-29; pfam:Fibrillarin (PF01269) at aa 70-312, E()=2.00e-155; 1 probable transmembrane helix predicted for TA09940 by TMHMM2.0 at aa 7-29 TA09935 SMART LH2 (SM00308) at aa 163-271, E()=7.17e-03; LCCL (SM00603) at aa 650-738, E()=2.38e-19; 984-1072, E()=4.09e-05; 1091-1178, E()=2.80e-16; SR (SM00202) at aa 402-515, E()=3.99e-10 TA09930 SMART pfam:Radical_SAM (PF04055) at aa 103-272, E()=6.30e-11 TA09925 Tap579b07.q1c.C.cand.96 - score = 25.13; SMART 6 transmembrane domains at aa 32-54, 83-102, 117-139, 159-178, 193-215 and 217-239; 6 probable transmembrane helices predicted for TA09925 by TMHMM2.0 at aa 32-54, 83-102, 117-139, 159-178, 193-215 and 217-239 TA09915 Tap579b07.q1c.cand.50 - score = 21.67; SMART pfam:Metallophos (PF00149) at aa 10-128, E()=5.30e-02 TA09910 Tap579b07.q1c.cand.49 - score = 85.42; SMART 2 pfam:Clp_N (PF02861) at aa 85-137, E()=3.00e-05; 161-206, E()=9.70e-03; 2 AAA domains (SM00382) at aa 289-444, E()=1.21e-10; 618-768, E()=1.36e-09 TA09905 Tap579b07.q1c.cand.48 - score = 51.40; SMART pfam:PPR (PF01535) at aa 224-258, E()=3.20e-05; Apicoplast targetting peptide predicted by the PlasmoAP tool; Signal anchor predicted for TA09905 by SignalP 2.0 HMM (Signal peptide probability 0.183, signal anchor probability 0.714) with cleavage site probability 0.036 between residues 40 and 41 TA09900 Tap579b07.q1c.cand.48 - score = 51.40; SMART pfam:DUF59 (PF01883) at aa 71-150, E()=4.80e-09 TA09895 5 probable transmembrane helices predicted for TA09895 by TMHMM2.0 at aa 127-149, 227-249, 259-281, 286-308 and 328-350 TA09890 Tap579b07.q1c.C.cand.97 - score = 266.09; SMART 3 PHD (SM00249) at aa 1211-1267, E()=1.91e+00; 1616-1667, E()=3.15e-02; 2975-3045, E()=1.31e+00; BROMO (SM00297) at aa 1269-1371, E()=6.40e-06; SET (SM00317) at aa 3466-3592, E()=5.78e-37 TA09885 Tap579b07.q1c.cand.46 - score = 64.75; SMART pfam:Ubie_methyltran (PF01209) at aa 32-319, E()=2.40e-78; GPI-Anchor Signal predicted for TA09885 by DGPI v2.04, no cleavage site predicted TA09875 Tap579b07.q1c.C.cand.98 - score = 28.81; SMART pfam:UPF0020 (PF01170) at aa 222-462, E()=2.60e-02 TA09870 Tap579b07.q1c.C.cand.99 - score = 13.71; SMART 15 transmembrane domains 44-66, 108-130, 134-156, 284-301, 308-330, 340-362, 561-583, 593-611, 618-640, 655-677, 684-706, 75-777, 807-829, 839-861 and 987-1009; pfam:COX2_TM (PF02790) at aa 180-251, E()=7.50e-02; pfam:Glycos_transf_4 (PF00953) at aa 398-552, E()=9.10e-02; 22 probable transmembrane helices predicted for TA09870 by TMHMM2.0 at aa 44-66, 108-130, 134-156, 163-185, 200-222, 227-249, 284-301, 308-330, 340-362, 400-419, 429-451, 471-490, 526-548, 561-583, 593-611, 618-640, 655-677, 684-706, 755-777, 807-829, 839-861 and 987-1009 TA09860 Tap579b07.q1c.cand.45 - score = 97.78 TA09855 Tap579b07.q1c.cand.45 - score = 97.78; SMART 4 WD40 (SM00320) at aa 178-221, E()=8.59e-01; 245-285, E()=1.78e-05; 288-326, E()=5.15e-02; 344-383, E()=2.77e-01 TA09850 Tap579b07.q1c.C.cand.100 - score = 77.99; SMART ZnF_NFX (SM00438) at aa 347-374, E()=0.00e+00; AWS (SM00570) at aa 721-765, E()=8.65e-02; SET (SM00317) at aa 768-896, E()=3.22e-35 TA09845 Tap579b07.q1c.C.cand.100 - score = 77.99; SMART 2 transmembrane domains at aa 21-40, 78-100; 2 probable transmembrane helices predicted for TA09845 by TMHMM2.0 at aa 21-40 and 78-100 TA09840 Tap579b07.q1c.C.cand.101 - score = 116.11; SMART POLBc (SM00486) at aa 295-976, E()=1.02e-60 TA09830 Tap579b07.q1c.C.cand.102 - score = 49.39 TA09825 Tap579b07.q1c.cand.43 - score = 11.68; SMART 1 transmembrane domain at aa 99-121; 1 probable transmembrane helix predicted for TA09825 by TMHMM2.0 at aa 99-121 TA09820 Tap579b07.q1c.C.cand.103 - score = 19.95; SMART S_TKc (SM00220) at aa 10-297, E()=1.66e-79; pfam:KA1 (PF02149) at aa 397-445, E()=4.00e-02 TA09815 Tap579b07.q1c.cand.42 - score = 30.52; SMART pfam:DUF529 (PF04385) at aa 119-282, E()=5.00e-07; 363-500, E()=1.70e-87 TA11380 Tap579b07.q1c.cand.41 - score = 25.52; SMART DEXDc (SM00487) at aa 89-292, E()=1.30e-52; HELICc (SM00490) at aa 328-409, E()=8.55e-21 TA11375 Tap579b07.q1c.C.cand.104 - score = 45.92; SMART ZnF_RBZ (SM00547) at aa 294-318, E()=1.24e-06; ZnF_C2H2 (SM00355) at aa 812-837, E()=2.12e+01 TA11370 SMART pfam:Tfb4 (PF03850) at aa 27-370, E()=1.10e-04; 5 probable transmembrane helices predicted for TA11370 by TMHMM2.0 at aa 56-78, 98-120, 169-191, 277-299 and 330-352 TA11365 Tap579b07.q1c.cand.40 - score = 7.94; SMART pfam:ER_lumen_recept (PF00810) at aa 2-209, E()=1.00e-111; 3 probable transmembrane helices predicted for TA11365 by TMHMM2.0 at aa 60-82, 103-125 and 182-204; Signal peptide predicted for TA11365 by SignalP 2.0 HMM (Signal peptide probability 0.733, signal anchor probability 0.063) with cleavage site probability 0.459 between residues 28 and 29 TA11360 SMART 3 transmembrane domains at aa 36-58, 93-115 and 128-150; ZnF_NFX (SM00438) at aa 547-562, E()=0.00e+00; Apicoplast targetting peptide predicted by the PlasmoAP tool; 3 probable transmembrane helices predicted for TA11360 by TMHMM2.0 at aa 36-58, 93-115 and 128-150; Signal anchor predicted for TA11360 by SignalP 2.0 HMM (Signal peptide probability 0.000, signal anchor probability 0.993) with cleavage site probability 0.000 between residues 62 and 63 TA11355 SMART 2 transmembrane domains at aa 113-135 and 140-162; 2 probable transmembrane helices predicted for TA11355 by TMHMM2.0 at aa 113-135 and 140-162 TA11350 Tap579b07.q1c.cand.38 - score = 15.05; SMART pfam:proteasome (PF00227) at aa 28-215, E()=3.00e-53 TA11345 Tap579b07.q1c.C.cand.107 - score = 17.10; SMART pfam:proteasome (PF00227) at aa 26-209, E()=1.70e-41 TA11340 SMART RING (SM00184) at aa 58-97, E()=5.56e-03; ZnF_NFX (SM00438) at aa 79-99, E()=0.00e+00 TA11335 Tap579b07.q1c.cand.37 - score = 8.05 TA11330 Tap579b07.q1c.cand.36 - score = 63.24; SMART pfam:FtsJ (PF01728) at aa 24-202, E()=1.90e-74 TA11325 Tap579b07.q1c.cand.36 - score = 63.24; SMART pfam:ATP-synt_C (PF00137) at aa 17-82, E()=3.30e-04; 113-178, E()=5.80e-09; 4 probable transmembrane helices predicted for TA11325 by TMHMM2.0 at aa 15-37, 58-80, 115-137 and 157-179; Signal anchor predicted for TA11325 by SignalP 2.0 HMM (Signal peptide probability 0.078, signal anchor probability 0.910) with cleavage site probability 0.053 between residues 36 and 37 TA11320 Tap579b07.q1c.C.cand.109 - score = 12.55; SMART pfam:V-SNARE (PF05008) at aa 103-245, E()=4.00e-02; 1 transmembrane domain at aa 247-266; 1 probable transmembrane helix predicted for TA11320 by TMHMM2.0 at aa 247-266 TA11315 Tap579b07.q1c.C.cand.110 - score = 25.78 TA11310 Tap579b07.q1c.C.cand.111 - score = 48.06 TA11305 Tap579b07.q1c.cand.35 - score = 10.85; SMART pfam:S10_plectin (PF03501) at aa 11-106, E()=2.10e-48 TA11300 Tap579b07.q1c.C.cand.112 - score = 20.51 TA11295 Tap579b07.q1c.C.cand.113 - score = 75.73; SMART RRM (SM00360) at aa 214-297, E()=4.03e-19 TA11285 Tap579b07.q1c.C.cand.114 - score = 12.56 TA11280 Tap579b07.q1c.C.cand.115 - score = 36.85 TA11275 Tap579b07.q1c.C.cand.116 - score = 28.96; SMART pfam:DUF143 (PF02410) at aa 207-314, E()=3.40e-04 TA11270 Tap579b07.q1c.cand.34 - score = 15.66; SMART pfam:Ribosomal_S7e (PF01251) at aa 3-192, E()=1.60e-43 TA11265 Tap579b07.q1c.C.cand.117 - score = 42.42 TA11260 Tap579b07.q1c.C.cand.118 - score = 22.65; SMART DnaJ (SM00271) at aa 11-76, E()=3.73e-04 TA11255 Tap579b07.q1c.cand.33 - score = 37.83; SMART pfam:Ribosomal_L21p (PF00829) at aa 202-299, E()=1.60e-07 TA11250 Tap579b07.q1c.C.cand.119 - score = 55.31; SMART RIO (SM00090) at aa 65-288, E()=5.87e-52 TA11240 SMART pfam:UPF0160 (PF03690) at aa 1-334, E()=1.30e-63 TA11235 Tap579b07.q1c.cand.31 - score = 26.23 TA11230 Tap579b07.q1c.C.cand.121 - score = 49.00; SMART 1 transmembrane domain at aa 5-27; pfam:Peptidase_M22 (PF00814) at aa 97-403, E()=5.90e-56; 1 probable transmembrane helix predicted for TA11230 by TMHMM2.0 at aa 5-27; Signal peptide predicted for TA11230 by SignalP 2.0 HMM (Signal peptide probability 0.846, signal anchor probability 0.000) with cleavage site probability 0.372 between residues 17 and 18 TA11225 Tap579b07.q1c.cand.30 - score = 26.82; SMART pfam:Ribosomal_S10 (PF00338) at aa 204-301, E()=2.50e-03 TA11220 Tap579b07.q1c.cand.29 - score = 60.91; SMART pfam:RLI (PF04088) at aa 19-50, E()=3.90e-12; pfam:fer4 (PF00037) at aa 61-84, E()=6.00e-08; AAA (SM00382) at aa 115-317, E()=6.08e-07; 405-577, E()=2.25e-10 TA11215 Tap579b07.q1c.C.cand.122 - score = 24.09 TA11210 Tap579b07.q1c.C.cand.123 - score = 8.89 TA11205 Tap579b07.q1c.cand.28 - score = 18.36 TA11200 Tap579b07.q1c.C.cand.124 - score = 22.74 TA11195 Tap579b07.q1c.C.cand.125 - score = 9.44 TA11190 Tap579b07.q1c.C.cand.126 - score = 54.44 TA11185 Tap579b07.q1c.cand.27 - score = 21.69; SMART pfam:NAC (PF01849) at aa 55-114, E()=2.30e-17; pfam:UBA (PF00627) at aa 160-200, E()=4.60e-04 TA11180 Tap579b07.q1c.cand.26 - score = 15.73 TA11175 Tap579b07.q1c.C.cand.127 - score = 32.19; SMART pfam:DUF558 (PF04452) at aa 109-219, E()=8.10e-14 TA11170 Tap579b07.q1c.cand.25 - score = 92.90 TA11165 Tap579b07.q1c.C.cand.129 - score = 15.69 TA11160 Tap579b07.q1c.cand.24 - score = 90.89; SMART pfam:B-tub_coD (PF05074) at aa 47-1052, E()=2.70e-30; pfam:HEAT_PBS (PF03130) at aa 419-452, E()=9.50e-02 TA11155 Tap579b07.q1c.cand.23 - score = 147.26 TA11150 Tap579b07.q1c.cand.23 - score = 147.26; SMART pfam:B3_4 (PF03483) at aa 63-202, E()=1.20e-06; pfam:B5 (PF03484) at aa 314-384, E()=2.50e-16 TA11145 Tap579b07.q1c.cand.23 - score = 147.26 TA11140 Tap579b07.q1c.cand.22 - score = 54.47; SMART 3 pfam:PPTA (PF01239) at aa 102-132, E()=4.30e-02; 145-174, E()=6.90e-02; 221-249, E()=7.20e-04 TA11135 SMART Sec7 (SM00222) at aa 542-945, E()=1.09e-06 TA11130 Tap579b07.q1c.C.cand.132 - score = 39.49; SMART pfam:Peptidase_C48 (PF02902) at aa 298-517, E()=5.80e-23 TA11125 Tap579b07.q1c.cand.21 - score = 26.83; SMAR pfam:PMI_typeI (PF01238) at aa 4-395, E()=7.90e-23 TA11120 Tap579b07.q1c.C.cand.133 - score = 59.19; SMART STYKc (SM00221) at aa 299-543, E()=1.37e-03 TA11115 SMART pfam:Gpi1 (PF05024) at aa 277-462, E()=3.40e-09; 7 probable transmembrane helices predicted for TA11115 by TMHMM2.0 at aa 199-221, 241-258, 278-300, 313-335, 401-423, 445-467 and 482-504 TA11110 SMART pfam:Amidohydro_1 (PF01979) at aa 3-361, E()=1.80e-06 TA11105 Tap579b07.q1c.cand.20 - score = 72.94; SMART pfam:GFLV_dehydrog_N (PF02812) at aa 327-719, E()=6.50e-12; pfam:GFLV_dehydrog (PF00208) at aa 736-1058, E()=4.20e-37 TA11100 Tap579b07.q1c.C.cand.135 - score = 93.52 TA11095 Tap579b07.q1c.C.cand.136 - score = 17.46; SMART 7 transmembrane domains at aa 67-89, 94-116, 152-169, 184-203, 210-232, 242-264 and 331-353; 7 probable transmembrane helices predicted for TA11095 by TMHMM2.0 at aa 67-89, 94-116, 152-169, 184-203, 210-232, 242-264 and 331-353 TA11090 Tap579b07.q1c.C.cand.137 - score = 64.41; SMART DEXDc (SM00487) at aa 353-575, E()=2.40e-24; HELICc (SM00490) at aa 757-862, E()=2.83e-12 TA11085 SMART 2 S1 domains (SM00316) at aa 114-185, E()=3.44e-12; 204-285, E()=6.14e-09; pfam:Sas10_Utp3 (PF04000) at aa 540-944, E()=9.30e-02 TA11075 Tap579b07.q1c.cand.17 - score = 12.22; SMART pfam:Ribosomal_L7Ae (PF01248) at aa 21-115, E()=4.90e-31 TA11070 Tap579b07.q1c.C.cand.138 - score = 36.14; SMART pfam:S-AdoMet_synt (PF00438) at aa 12-112, E()=5.20e-49; pfam:S-AdoMet_syntD2 (PF02772) at aa 124-247, E()=6.10e-69; pfam:S-AdoMet_syntD3 (PF02773) at aa 249-402, E()=2.70e-70 TA11065 Tap579b07.q1c.C.cand.139 - score = 39.29; C terminal extensio clearly relies on P. yoelii; SMART pfam:Amidase (PF01425) at aa 65-519, E()=1.90e-37; 1 probable transmembrane helix predicted for TA11065 by TMHMM2.0 at aa 475-497 TA11060 Tap579b07.q1c.C.cand.140 - score = 31.16; SMART RING (SM00184) at aa 23-61, E()=9.37e-10; 2 transmembrane domains at aa 114-133, 166-188; 2 probable transmembrane helices predicted for TA11060 by TMHMM2.0 at aa 114-133 and 166-188 TA11055 calcium-binding protein; SMART pfam:efhand (PF00036) at aa 76-104, E()=3.10e-03 TA11050 Tap579b07.q1c.cand.16 - score = 42.16; 1 probable transmembrane helix predicted for TA11050 by TMHMM2.0 at aa 9-31; Signal peptide predicted for TA11050 by SignalP 2.0 HMM (Signal peptide probability 0.676, signal anchor probability 0.317) with cleavage site probability 0.439 between residues 25 and 26 TA11025 Tap579b07.q1c.cand.15 - score = 35.52; SMART pfam:Patatin (PF01734) at aa 221-395, E()=2.60e-02 TA10970 Tap579b07.q1c.cand.14 - score = 49.32; SMART AAA (SM00382) at aa 547-696, E()=1.64e-03 TA10965 Tap579b07.q1c.C.cand.141 - score = 26.10; SMART SEC14 (SM00516) at aa 132-287, E()=3.80e-07 TA10860 Tap579b07.q1c.cand.13 - score = 14.92; SMART 3 transmembrane domains at aa 218-240, 253-275 and 290-311; 3 probable transmembrane helices predicted for TA10860 by TMHMM2.0 at aa 218-240, 253-275 and 290-311 TA10855 Tap579b07.q1c.C.cand.142 - score = 94.63 TA10750 Tap579b07.q1c.cand.12 - score = 11.97; SMART 2 transmembrane domains at aa 180-202 and 233-255; 2 probable transmembrane helices predicted for TA10750 by TMHMM2.0 at aa 180-202 and 233-255 TA10745 Tap579b07.q1c.C.cand.143 - score = 59.27; SMART 4 WD (SM00320) domains at aa 280-319, E()=1.64e+02; 352-398, E()=3.27e-04; 486-525, E()=2.66e+00; 528-575, E()=2.47e+01 TA10690 SMART UBCc (SM00212) at aa 20-170, E()=1.24e-50 TA10585 Tap579b07.q1c.cand.11 - score = 68.58; SMART 6 HAT (SM00386) domains at aa82-113, E()=1.46e+00; 119-155, E()=3.91e-01; 167-200, E()=5.59e+02; 225-259, E()=5.41e+02; 261-294, E()=1.88e+01; 295-327, E()=4.63e+02; pfam:rrm (PF00076) at aa 817-895, E()=1.60e-02; RRM (SM00360) at aa 1017-1088, E()=8.20e-11 TA10530 Tap579b07.q1c.cand.10 - score = 37.31; SMART 10 transmembrane domains at aa 23-45, 66-88, 93-115, 120-142, 152-174, 187-204, 742-764, 785-807, 817-839 and 852-874; 10 probable transmembrane helices predicted for TA10530 by TMHMM2.0 at aa 23-45, 66-88, 93-115, 120-142, 152-174, 187-204, 742-764, 785-807, 817-839 and 852-874 TA10475 Tap579b07.q1c.cand.9 - score = 28.81; SMART 10 transmembrane domains at aa 81-103, 118-140, 147-169, 175-197, 210-232, 674-696, 703-725, 740-762, 775-794 and 814-836; 10 probable transmembrane helices predicted for TA10475 by TMHMM2.0 at aa 81-103, 118-140, 147-169, 175-197, 210-232, 674-696, 703-725, 740-762, 775-794 and 814-836 TA10420 Tap579b07.q1c.cand.8 - score = 21.64; SMART 11 transmembrane domains at aa 4-23 90-112, 141-160, 167-189, 204-226, 231-250, 265-287, 561-583, 596-618, 630-652, and 667-689; 11 probable transmembrane helices predicted for TA10420 by TMHMM2.0 at aa 4-23, 90-112, 141-160, 167-189, 204-226, 231-250, 265-287, 561-583, 596-618, 630-652 and 667-689 TA10365 Tap579b07.q1c.cand.7 - score = 36.78; SMART pfam:IBB (PF01749) at aa 2-110, E()=2.30e-04; 8 ARM (SM00185) domains at aa 119-160, E()=2.06e-04; 162-202, E()=2.80e-08; 204-245, E()=5.64e-04; 247-286, E()=1.34e+01; 288-328, E()=1.74e-04; 220-370, E()=4.02e-09; 372-412, E()=1.51e-04; 415-455, E()=3.52e+00 TA10310 SMART 2 transmembrane domains at aa 21-39 and 59-81; pfam:Nucleoplasmin (PF03066) at aa 87-230, E()=7.10e-03; 2 probable transmembrane helices predicted for TA10310 by TMHMM2.0 at aa 21-39 and 59-81; Signal anchor predicted for TA10310 by SignalP 2.0 HMM (Signal peptide probability 0.003, signal anchor probability 0.794) with cleavage site probability 0.001 between residues 34 and 35 TA10305 SMART pfam:Ribosomal_S17 (PF00366) at aa 39-118, E()=5.10e-04 TA10200 Tap579b07.q1c.cand.5 - score = 25.10 TA10195 SMART pfam:RNA_pol_Rpb5_N (PF03871) at aa 1-90, E()=6.70e-12; pfam:RNA_pol_Rpb5_C (PF01191) at aa 132-205, E()=2.00e-41 TA10090 Tap579b07.q1c.cand.4 - score = 18.98; SMART 3 WD40 (SM00320) domains at aa 2-38, E()=9.55e+00; 242-279, E()=4.95e+00; 282-321, E()=3.05e-04 TA10085 Tap579b07.q1c.C.cand.147 - score = 28.94; SMART pfam:Rieske (PF00355) at aa 238-343, E()=3.80e-09; 1 probable transmembrane helix predicted for TA10085 by TMHMM2.0 at aa 176-198 TA10030 Tap579b07.q1c.C.cand.148 - score = 83.00; SMART 7 transmembrane domains at aa 144-166, 173-195, 205-227, 286-308, 323-345, 397-419 and 439-461; 2 AAA (SM00382) domains at aa 569-703, E()=4.40e-04; 1425-1682, E()=3.63e-01; pfam:ABC_membrane (PF00664) at aa 896-1186, E()=2.10e-02; 12 probable transmembrane helices predicted for TA10030 by TMHMM2.0 at aa 144-166, 173-195, 205-227, 286-308, 323-345, 397-419, 439-461, 882-904, 954-976, 1026-1048, 1053-1075 and 1132-1154 TA09975 Tap579b07.q1c.C.cand.149 - score = 16.32; Signal peptide predicted for TA09975 by SignalP 2.0 HMM (Signal peptide probability 0.901, signal anchor probability 0.078) with cleavage site probability 0.605 between residues 22 and 23 TA09920 Tap579b07.q1c.C.cand.150 - score = 36.14; SMART 2 pfam:DUF529 (PF04385) at aa 40-181, E()=1.60e-40; 476-617, E()=4.00e-22 TA09865 Tap579b07.q1c.C.cand.151 - score = 38.90; 1 probable transmembrane helix predicted for TA09865 by TMHMM2.0 at aa 5-24; Signal peptide predicted for TA09865 by SignalP 2.0 HMM (Signal peptide probability 0.700, signal anchor probability 0.292) with cleavage site probability 0.677 between residues 23 and 24 TA09810 Tap579b07.q1c.C.cand.152 - score = 14.18; 1 probable transmembrane helix predicted for TA09810 by TMHMM2.0 at aa 13-35; Signal anchor predicted for TA09810 by SignalP 2.0 HMM (Signal peptide probability 0.001, signal anchor probability 0.720) with cleavage site probability 0.000 between residues 40 and 41 TA09805 Tap579b07.q1c.C.cand.153 - score = 36.40; Signal peptide predicted for TA09805 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22 TA09800 Tap579b07.q1c.C.cand.154 - score = 42.52; Signal peptide predicted for TA09800 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22 TA09795 Tap579b07.q1c.C.cand.155 - score = 33.22; Signal peptide predicted for TA09795 by SignalP 2.0 HMM (Signal peptide probability 0.914, signal anchor probability 0.000) with cleavage site probability 0.885 between residues 18 and 19 TA09790 Tap579b07.q1c.C.cand.156 - score = 46.01; Signal peptide predicted for TA09790 by SignalP 2.0 HMM (Signal peptide probability 0.867, signal anchor probability 0.063) with cleavage site probability 0.449 between residues 21 and 22 TA09785 Tap579b07.q1c.C.cand.157 - score = 155.73; 1 probable transmembrane helix predicted for TA09785 by TMHMM2.0 at aa 5-22; Signal peptide predicted for TA09785 by SignalP 2.0 HMM (Signal peptide probability 0.961, signal anchor probability 0.039) with cleavage site probability 0.936 between residues 20 and 21 TA09780 Tap579b07.q1c.C.cand.157 - score = 155.73; SMART 6 pfam:DUF529 (PF04385) domains at aa 378-528, E()=8.30e-08; 678-828, E()=1.50e-22; 976-1116, E()=6.00e-63; 1191-1332, E()=1.80e-50; 1376-1537, E()=1.60e-58; 1581-1722, E()=7.30e-70 TA09775 Tap579b07.q1c.C.cand.158 - score = 49.60; SMART pfam:DUF529 (PF04385) at aa 145-286, E()=4.30e-73; 329-478, E()=1.10e-59; 543-681, E()=2.50e-74; Signal peptide predicted for TA09775 by SignalP 2.0 HMM (Signal peptide probability 0.875, signal anchor probability 0.000) with cleavage site probability 0.791 between residues 25 and 26 TA09770 Tap579b07.q1c.C.cand.159 - score = 92.69; SMART pfam:EMA (PF02488) at aa 964-1220, E()=1.00e-02; pfam:DUF529 (PF04385) at aa 94-232, E()=2.70e-67; 415-552, E()=1.00e-57; 595-757, E()=8.20e-58; 805-942, E()=2.00e-57; 985-1095, E()=8.40e-09; 1111-1234, E()=6.00e-39; Signal peptide predicted for TA09770 by SignalP 2.0 HMM (Signal peptide probability 0.975, signal anchor probability 0.000) with cleavage site probability 0.696 between residues 25 and 26 Tap370b08.q2ca38.01 SMART pfam:COX1 (PF00115) at aa 38-497, E()=5.90e-166 Tap370b08.q2ca38.02c SMART pfam:COX3 (PF00520) at aa 56-264, E()=6.00e-05 Tap370b08.q2ca38.03c SMART pfam:cytochrome_b_N (PF00033) at aa 1-190, E()=3.00e-44; pfam:cytochrome_b_C (PF00032) at aa 246-351, E()=5.50e-06; 1 transmembrane domain at aa 215-237